Muroidea_A ANCESTRAL SPECIES 3 ENSGT00900000143241 ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717 #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000158224 ENSGT00900000143810 ENSGT00940000159542 ENSGT00860000136016 ENSGT00390000001846 ENSGT00840000130852.a.b ENSGT00530000064276 ENSGT00940000159419 ENSGT00390000004451 ENSGT01030000234597.a.b.b.e.a.a Murinae ANCESTRAL SPECIES 2 ENSGT00950000183021.a.a.b ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717 #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 Mus ANCESTRAL SPECIES 3 ENSGT00950000183021.a.a.b ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717 #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 Mus_A ANCESTRAL SPECIES 5 ENSGT00950000183021.a.a.b ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717 #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000162362 ENSGT00400000023306 ENSGT00390000006761 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00940000160697 ENSGT00940000161882 ENSGT00940000156618 ENSGT01050000244824.B ENSGT00940000159860 Mus_B ANCESTRAL SPECIES 21 ENSGT00950000183021.a.a.b ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717 #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000162362 ENSGT00400000023306 ENSGT00390000006761 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00940000160697 ENSGT00940000161882 ENSGT00940000156618 ENSGT01050000244824.B ENSGT00940000159860 Mus_C ANCESTRAL SPECIES 1 ENSGT00940000154681.a ENSGT00950000182909.b.b.a ENSGT00530000063956.a ENSGT00940000157210 ENSGT00940000158019 ENSGT00940000153709.A ENSGT00940000154899 #12 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717 #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000162362 ENSGT00400000023306 ENSGT00390000006761 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00940000160697 ENSGT00940000161882 ENSGT00940000156618 ENSGT01050000244824.B ENSGT00940000159860 Steppe mouse MODERN SPECIES 3112 Trpa1 (ENSMSIG00000008184) #10 ENSMSIG00000008268 #11 Kcnb2 (ENSMSIG00000008283) #12 ENSMSIG00000008321 #13 Terf1 (ENSMSIG00000008344) #14 Sbspon (ENSMSIG00000008395) #15 4930444P10Rik (ENSMSIG00000008432) #16 ENSMSIG00000008454 #17 Rdh10 (ENSMSIG00000008466) #18 Stau2 (ENSMSIG00000008506) #19 ENSMSIG00000008651 #20 Eloc (ENSMSIG00000008694) #21 Tmem70 (ENSMSIG00000008764) #22 Ly96 (ENSMSIG00000008783) #23 ENSMSIG00000008820 #24 spretus MODERN SPECIES Lactb2 (MGP_SPRETEiJ_G0014760) Xkr9 (MGP_SPRETEiJ_G0014761) Eya1 (MGP_SPRETEiJ_G0014762) Msc (MGP_SPRETEiJ_G0014763) Trpa1 (MGP_SPRETEiJ_G0014764) #10 MGP_SPRETEiJ_G0014765 ##11 Kcnb2 (MGP_SPRETEiJ_G0014766) #12 Terf1 (MGP_SPRETEiJ_G0014767) #14 Sbspon (MGP_SPRETEiJ_G0014768) #15 4930444P10Rik (MGP_SPRETEiJ_G0014769) #16 Rpl7 (MGP_SPRETEiJ_G0014770) #17 Rdh10 (MGP_SPRETEiJ_G0014771) #18 Stau2 (MGP_SPRETEiJ_G0014772) #19 MGP_SPRETEiJ_G0014773 #20 Eloc (MGP_SPRETEiJ_G0014774) #21 Tmem70 (MGP_SPRETEiJ_G0014775) #22 Ly96 (MGP_SPRETEiJ_G0014776) #23 Jph1 (MGP_SPRETEiJ_G0014777) Gdap1 (MGP_SPRETEiJ_G0014778) Pi15 (MGP_SPRETEiJ_G0014779) Crispld1 (MGP_SPRETEiJ_G0014780) Crisp4 (MGP_SPRETEiJ_G0014781) Defb18 (MGP_SPRETEiJ_G0014782) Defb41 (MGP_SPRETEiJ_G0014783) Tfap2d (MGP_SPRETEiJ_G0014784) Tfap2b (MGP_SPRETEiJ_G0014785) MGP_SPRETEiJ_G0014786 Il17a (MGP_SPRETEiJ_G0014787) Il17f (MGP_SPRETEiJ_G0014788) Mcm3 (MGP_SPRETEiJ_G0014789) Paqr8 (MGP_SPRETEiJ_G0014790) Mouse MODERN SPECIES Tram1 (ENSMUSG00000025935) Lactb2 (ENSMUSG00000025937) Xkr9 (ENSMUSG00000067813) Eya1 (ENSMUSG00000025932) Msc (ENSMUSG00000025930) Trpa1 (ENSMUSG00000032769) #10 Kcnb2 (ENSMUSG00000092083) #12 Terf1 (ENSMUSG00000025925) #14 Sbspon (ENSMUSG00000032719) #15 4930444P10Rik (ENSMUSG00000067795) #16 Rpl7 (ENSMUSG00000043716) #17 Rdh10 (ENSMUSG00000025921) #18 Stau2 (ENSMUSG00000025920) #19 Ube2w (ENSMUSG00000025939) #20 Eloc (ENSMUSG00000079658) #21 Tmem70 (ENSMUSG00000025940) #22 Ly96 (ENSMUSG00000025779) #23 Jph1 (ENSMUSG00000042686) Gdap1 (ENSMUSG00000025777) Pi15 (ENSMUSG00000067780) Crispld1 (ENSMUSG00000025776) Crisp4 (ENSMUSG00000025774) Defb18 (ENSMUSG00000073735) Defb41 (ENSMUSG00000067773) Tfap2d (ENSMUSG00000042596) Tfap2b (ENSMUSG00000025927) Pkhd1 (ENSMUSG00000043760) Il17a (ENSMUSG00000025929) Il17f (ENSMUSG00000041872) Mcm3 (ENSMUSG00000041859) Paqr8 (ENSMUSG00000025931) Ryukyu mouse MODERN SPECIES Tram1 (MGP_CAROLIEiJ_G0013955) Lactb2 (MGP_CAROLIEiJ_G0013956) Xkr9 (MGP_CAROLIEiJ_G0013957) Eya1 (MGP_CAROLIEiJ_G0013958) Msc (MGP_CAROLIEiJ_G0013959) Trpa1 (MGP_CAROLIEiJ_G0013960) #10 Kcnb2 (MGP_CAROLIEiJ_G0013961) #12 Terf1 (MGP_CAROLIEiJ_G0013962) #14 Sbspon (MGP_CAROLIEiJ_G0013963) #15 4930444P10Rik (MGP_CAROLIEiJ_G0013964) #16 Rpl7 (MGP_CAROLIEiJ_G0013965) #17 Rdh10 (MGP_CAROLIEiJ_G0013966) #18 Stau2 (MGP_CAROLIEiJ_G0013967) #19 MGP_CAROLIEiJ_G0013968 #20 Eloc (MGP_CAROLIEiJ_G0013969) #21 Tmem70 (MGP_CAROLIEiJ_G0013970) #22 Ly96 (MGP_CAROLIEiJ_G0013971) #23 Jph1 (MGP_CAROLIEiJ_G0013972) Gdap1 (MGP_CAROLIEiJ_G0013973) Pi15 (MGP_CAROLIEiJ_G0013974) Crispld1 (MGP_CAROLIEiJ_G0013975) Crisp4 (MGP_CAROLIEiJ_G0013976) Defb18 (MGP_CAROLIEiJ_G0013977) Defb41 (MGP_CAROLIEiJ_G0013978) Tfap2d (MGP_CAROLIEiJ_G0013979) Tfap2b (MGP_CAROLIEiJ_G0013980) Pkhd1 (MGP_CAROLIEiJ_G0013981) Il17a (MGP_CAROLIEiJ_G0013982) Il17f (MGP_CAROLIEiJ_G0013983) Mcm3 (MGP_CAROLIEiJ_G0013984) Paqr8 (MGP_CAROLIEiJ_G0013985) Shrew mouse MODERN SPECIES 14 Tram1 (MGP_PahariEiJ_G0023864) Lactb2 (MGP_PahariEiJ_G0023863) Xkr9 (MGP_PahariEiJ_G0023862) Eya1 (MGP_PahariEiJ_G0023861) Msc (MGP_PahariEiJ_G0023860) Trpa1 (MGP_PahariEiJ_G0023859) #10 Kcnb2 (MGP_PahariEiJ_G0023858) #12 Terf1 (MGP_PahariEiJ_G0023857) #14 Sbspon (MGP_PahariEiJ_G0023856) #15 MGP_PahariEiJ_G0023855 #16 Rpl7 (MGP_PahariEiJ_G0023854) #17 Rdh10 (MGP_PahariEiJ_G0023853) #18 Stau2 (MGP_PahariEiJ_G0023852) #19 MGP_PahariEiJ_G0023851 #20 MGP_PahariEiJ_G0023850 Tmem70 (MGP_PahariEiJ_G0023849) #22 Ly96 (MGP_PahariEiJ_G0023848) #23 Jph1 (MGP_PahariEiJ_G0023847) Gdap1 (MGP_PahariEiJ_G0023846) Pi15 (MGP_PahariEiJ_G0023845) Crispld1 (MGP_PahariEiJ_G0023844) Rat MODERN SPECIES 15 Eya1 (ENSRNOG00000007590) Msc (ENSRNOG00000007540) Trpa1 (ENSRNOG00000007354) #10 ENSRNOG00000067608 AABR07047316.1 (ENSRNOG00000062174) AC125757.1 (ENSRNOG00000028991) #12 Terf1 (ENSRNOG00000007291) #14 Sbspon (ENSRNOG00000007258) #15 LOC297756 (ENSRNOG00000007238) LOC100912291 (ENSRNOG00000047310) #16 Rdh10 (ENSRNOG00000006681) #18 ENSRNOG00000069669 AABR07046707.1 (ENSRNOG00000042458) #19 Ube2w (ENSRNOG00000062415) #20 Eloc (ENSRNOG00000031730) #21 Tmem70 (ENSRNOG00000006608) #22 Ly96 (ENSRNOG00000067966) #23 Jph1 (ENSRNOG00000006110) Gdap1 (ENSRNOG00000005850) AABR07046657.1 (ENSRNOG00000022709) Pi15 (ENSRNOG00000017686) Crispld1 (ENSRNOG00000017773) ENSRNOG00000065369 Cct6a-ps3 (ENSRNOG00000065568) ENSRNOG00000071172 Cricetidae ANCESTRAL SPECIES 2 ENSGT00900000143241 ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b.w #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717.gc #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000158224 ENSGT00900000143810 ENSGT00940000159542 ENSGT00860000136016 ENSGT00390000001846 ENSGT00840000130852.a.b ENSGT00530000064276 ENSGT00940000159419 ENSGT00390000004451 ENSGT01030000234597.a.b.b.e.a.a Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00900000143241 ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 #10 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b.w #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717.gc #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000158224 ENSGT00940000159542 ENSGT00860000136016 ENSGT00390000001846 ENSGT00840000130852.a.b ENSGT00530000064276 ENSGT00940000159419 ENSGT00390000004451 ENSGT01030000234597.a.b.b.e.a.a ENSGT00940000157068 Prairie vole MODERN SPECIES 355 Tram1 (ENSMOCG00000022670) Lactb2 (ENSMOCG00000019816) Xkr9 (ENSMOCG00000000504) Eya1 (ENSMOCG00000007882) Msc (ENSMOCG00000017679) Trpa1 (ENSMOCG00000004911) #10 Kcnb2 (ENSMOCG00000017006) #12 Terf1 (ENSMOCG00000010956) #14 Sbspon (ENSMOCG00000022550) #15 4930444P10Rik (ENSMOCG00000008670) #16 ENSMOCG00000002541 #17 Rdh10 (ENSMOCG00000014784) #18 Stau2 (ENSMOCG00000001037) #19 ENSMOCG00000007482 #20 ENSMOCG00000022694 #21 Tmem70 (ENSMOCG00000021313) #22 Ly96 (ENSMOCG00000016438) #23 Jph1 (ENSMOCG00000015433) Hnf4g (ENSMOCG00000016906) Zfhx4 (ENSMOCG00000021103) Pex2 (ENSMOCG00000020937) ENSMOCG00000019032 ENSMOCG00000016420 ENSMOCG00000014261 Pkia (ENSMOCG00000012790) Zc2hc1a (ENSMOCG00000012476) Il7 (ENSMOCG00000011670) ENSMOCG00000019041 Car2 (ENSMOCG00000011119) Car3 (ENSMOCG00000006267) Car1 (ENSMOCG00000000956) Northern American deer mouse MODERN SPECIES 11 Xkr9 (ENSPEMG00000010792) ENSPEMG00000011926 ENSPEMG00000028794 Eya1 (ENSPEMG00000015459) Msc (ENSPEMG00000010582) Trpa1 (ENSPEMG00000011394) #10 Kcnb2 (ENSPEMG00000012206) #12 Terf1 (ENSPEMG00000013150) #14 Sbspon (ENSPEMG00000017540) #15 4930444P10Rik (ENSPEMG00000001432) #16 ENSPEMG00000007818 #17 Rdh10 (ENSPEMG00000026926) #18 Stau2 (ENSPEMG00000012104) #19 Ube2w (ENSPEMG00000019057) #20 ENSPEMG00000009658 #21 Tmem70 (ENSPEMG00000012641) #22 Ly96 (ENSPEMG00000015591) #23 Jph1 (ENSPEMG00000019130) Gdap1 (ENSPEMG00000028457) Pi15 (ENSPEMG00000011138) Crispld1 (ENSPEMG00000017885) Hnf4g (ENSPEMG00000000555) Zfhx4 (ENSPEMG00000017619) ENSPEMG00000030247 Pex2 (ENSPEMG00000016945) ENSPEMG00000016512 ENSPEMG00000016137 Pkia (ENSPEMG00000026223) Zc2hc1a (ENSPEMG00000015507) Il7 (ENSPEMG00000015008) ENSPEMG00000030639 Cricetinae ANCESTRAL SPECIES 31 ENSGT00950000183021.a.a.b ENSGT00900000143241 ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000155268 #14 ENSGT00390000008325.b.b #15 ENSGT00700000106212 #16 ENSGT00950000182878.b.a.c.a.b.w.a #17 ENSGT00940000157063 #18 ENSGT00940000154977 #19 ENSGT00940000156908 #20 ENSGT00390000011717.gc #21 ENSGT00390000018710 #22 ENSGT00390000000742 #23 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000158224 ENSGT00900000143810 ENSGT00940000159542 ENSGT00390000001846 ENSGT00840000130852.a.b ENSGT00530000064276 ENSGT00940000159419 ENSGT00390000004451 ENSGT01030000234597.a.b.b.e.a.a ENSGT00940000157068 Chinese hamster chok1gshd MODERN SPECIES 136 Xkr9 (ENSCGRG00001015492) ENSCGRG00001015809 Eya1 (ENSCGRG00001017253) Msc (ENSCGRG00001020363) ENSCGRG00001021021 Trpa1 (ENSCGRG00001000252) #10 Kcnb2 (ENSCGRG00001005381) #12 Terf1 (ENSCGRG00001011681) #14 Sbspon (ENSCGRG00001013329) #15 4930444P10Rik (ENSCGRG00001020570) #16 ENSCGRG00001021333 #17 Rdh10 (ENSCGRG00001022234) #18 Stau2 (ENSCGRG00001006522) #19 ENSCGRG00001022923 #20 Eloc (ENSCGRG00001001449) #21 Tmem70 (ENSCGRG00001018216) #22 Ly96 (ENSCGRG00001019128) #23 Jph1 (ENSCGRG00001020008) Gdap1 (ENSCGRG00001020654) ENSCGRG00001021316 Pi15 (ENSCGRG00001022091) Crispld1 (ENSCGRG00001023292) Hnf4g (ENSCGRG00001005690) ENSCGRG00001015146 Zfhx4 (ENSCGRG00001011235) PEX2 (ENSCGRG00001015243) ENSCGRG00001015435 Pkia (ENSCGRG00001014887) Zc2hc1a (ENSCGRG00001015367) Il7 (ENSCGRG00001016068) Stmn2 (ENSCGRG00001016949)