Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182944.D #22
Sarcopterygii	ANCESTRAL SPECIES	798																ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110
Tetrapoda	ANCESTRAL SPECIES	113		ENSGT01060000248544.a.b.b	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.a.a.b	ENSGT00390000013846.a.b	ENSGT00950000183161.a.a	ENSGT00390000016199	ENSGT00390000001026	ENSGT01000000215801	ENSGT00940000160769 #31	ENSGT00390000002843	ENSGT00940000154708 #30	ENSGT00550000074977 #29	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605 #17	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00980000198705	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10
Amniota	ANCESTRAL SPECIES	66	ENSGT00390000008658	ENSGT00940000158480	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00940000161757	ENSGT00940000154370	ENSGT00560000077232.A	ENSGT00390000003213	ENSGT00940000159733	ENSGT00940000159890	ENSGT00940000158605.eb.b ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT00390000010806	ENSGT00940000163974	ENSGT00940000157642	ENSGT00930000152259	ENSGT00390000018500.a
Mammalia	ANCESTRAL SPECIES	57	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000000752 #33	ENSGT00390000015960 #36	ENSGT00940000160908 #37	ENSGT00390000003781.e.b	ENSGT00390000003292	ENSGT00390000009270
Theria	ANCESTRAL SPECIES	4	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.a.a #36	ENSGT00940000160908 #37	ENSGT00390000003781.e.b
Eutheria	ANCESTRAL SPECIES	33	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a #36
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.a.a.b #36
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Primates	ANCESTRAL SPECIES	5	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459.a #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.n	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459.a #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.n	ENSGT00940000161215.m	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Lemuriformes_a	ANCESTRAL SPECIES	76	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459.a #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.n	ENSGT00940000161215.m	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Coquerels sifaka	MODERN SPECIES	576	PPT2 (ENSPCOG00000021664) #7	PRRT1 (ENSPCOG00000016826) #8	ATF6B (ENSPCOG00000020781) #9	TNXB (ENSPCOG00000021738) #10	CYP21A2 (ENSPCOG00000026091) #11	ENSPCOG00000023318 #12	STK19 (ENSPCOG00000016856) #13	DXO (ENSPCOG00000016641) #14	SKIC2 (ENSPCOG00000010308) #15	NELFE (ENSPCOG00000024944) #16	CFB (ENSPCOG00000027745) #17	C2 (ENSPCOG00000018194) #18	ZBTB12 (ENSPCOG00000013160) #19	EHMT2 (ENSPCOG00000012310) #20	SLC44A4 (ENSPCOG00000025102) #21	NEU1 (ENSPCOG00000016799) #22	ENSPCOG00000016806 #23	HSPA1L (ENSPCOG00000013421) #24	LSM2 (ENSPCOG00000020134) #25	VARS1 (ENSPCOG00000010942) #26	VWA7 (ENSPCOG00000028056) #27	SAPCD1 (ENSPCOG00000017625) #28	MSH5 (ENSPCOG00000022829) #29	CLIC1 (ENSPCOG00000025628) #30	DDAH2 (ENSPCOG00000020625) #31	MPIG6B (ENSPCOG00000024968) #32	LY6G6C (ENSPCOG00000016840) #33	LY6G6D (ENSPCOG00000026710) #34	ENSPCOG00000017500 #35	LY6G6F (ENSPCOG00000021015) #36	ABHD16A (ENSPCOG00000025650) #37
Greater bamboo lemur	MODERN SPECIES	805	PRRT1 (ENSPSMG00000020425) #8	FKBPL (ENSPSMG00000020420)	ATF6B (ENSPSMG00000020293) #9	ENSPSMG00000020107 #10	ENSPSMG00000020099 #10	CYP21A2 (ENSPSMG00000020058) #11	ENSPSMG00000019797 #12	STK19 (ENSPSMG00000019401) #13	DXO (ENSPSMG00000019388) #14	SKIC2 (ENSPSMG00000019200) #15	NELFE (ENSPSMG00000019060) #16	CFB (ENSPSMG00000018848) #17	ZBTB12 (ENSPSMG00000018713) #19	EHMT2 (ENSPSMG00000018654) #20	SLC44A4 (ENSPSMG00000018499) #21	NEU1 (ENSPSMG00000018471) #22	ENSPSMG00000018399	ENSPSMG00000018374	ENSPSMG00000018369	HSPA1L (ENSPSMG00000018352) #24	LSM2 (ENSPSMG00000018346) #25	VARS1 (ENSPSMG00000018332) #26	VWA7 (ENSPSMG00000018308) #27	ENSPSMG00000018285	SAPCD1 (ENSPSMG00000018279) #28	MSH5 (ENSPSMG00000018256) #29	CLIC1 (ENSPSMG00000018200) #30	DDAH2 (ENSPSMG00000018176) #31	MPIG6B (ENSPSMG00000018151) #32	LY6G6C (ENSPSMG00000018106) #33	LY6G6F (ENSPSMG00000018087) #36
Mouse lemur	MODERN SPECIES	28	PRRT1 (ENSMICG00000032288) #8	ATF6B (ENSMICG00000047519) #9	ENSMICG00000016667 #10	ENSMICG00000046247 #10	CYP21A2 (ENSMICG00000016652) #11	ENSMICG00000016626 #12	STK19 (ENSMICG00000016610) #13	DXO (ENSMICG00000016605) #14	SKIC2 (ENSMICG00000046331) #15	NELFE (ENSMICG00000003287) #16	CFB (ENSMICG00000043004) #17	C2 (ENSMICG00000003602) #18	ZBTB12 (ENSMICG00000003600) #19	EHMT2 (ENSMICG00000003583) #20	SLC44A4 (ENSMICG00000044872) #21	NEU1 (ENSMICG00000003563) #22	HSPA1L (ENSMICG00000026585) #24	LSM2 (ENSMICG00000046764) #25	ENSMICG00000034824 #25	VARS1 (ENSMICG00000003548) #26	VWA7 (ENSMICG00000003535) #27	SAPCD1 (ENSMICG00000030120) #28	MSH5 (ENSMICG00000003523) #29	CLIC1 (ENSMICG00000033421) #30	DDAH2 (ENSMICG00000036019) #31	MPIG6B (ENSMICG00000036583) #32	LY6G6C (ENSMICG00000031779) #33	ENSMICG00000012720 #35	LY6G6F (ENSMICG00000028884) #36	ABHD16A (ENSMICG00000005816) #37	LY6G5C (ENSMICG00000045037)
Bushbaby	MODERN SPECIES	146	PPT2 (ENSOGAG00000010185) #7	PRRT1 (ENSOGAG00000010181) #8	FKBPL (ENSOGAG00000030316)	ATF6B (ENSOGAG00000032721) #9	TNXB (ENSOGAG00000009624) #10	CYP21A2 (ENSOGAG00000009619) #11	ENSOGAG00000009603 #12	STK19 (ENSOGAG00000009593) #13	DXO (ENSOGAG00000009590) #14	SKIC2 (ENSOGAG00000009578) #15	NELFE (ENSOGAG00000009574) #16	CFB (ENSOGAG00000009568) #17	ZBTB12 (ENSOGAG00000031042) #19	EHMT2 (ENSOGAG00000014177) #20	SLC44A4 (ENSOGAG00000014170) #21	NEU1 (ENSOGAG00000014167) #22	ENSOGAG00000030529	ENSOGAG00000030117	HSPA1L (ENSOGAG00000014154) #24	VARS1 (ENSOGAG00000007515) #26	VWA7 (ENSOGAG00000024868) #27	MSH5 (ENSOGAG00000010314) #29	CLIC1 (ENSOGAG00000031840) #30	DDAH2 (ENSOGAG00000010311) #31	MPIG6B (ENSOGAG00000010301) #32	LY6G6C (ENSOGAG00000031312) #33	ENSOGAG00000025486	LY6G6F (ENSOGAG00000010286) #36	ABHD16A (ENSOGAG00000010282) #37	LY6G5C (ENSOGAG00000027034)	LY6G5B (ENSOGAG00000030754)
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT01030000235045	ENSGT00940000158338.j #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000155565 #10	ENSGT00940000158338.j #11	ENSGT01030000235045	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418.g #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.a.a.b #36	ENSGT00390000007175 #35
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.j #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418.g #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.j #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418.g #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.a.a.b #36	ENSGT00390000007175 #35
Gorilla	MODERN SPECIES	19	ATF6B (ENSGGOG00000004870) #9	ENSGGOG00000012983 #10	ENSGGOG00000012976 #11	ENSGGOG00000043529 #12	ENSGGOG00000041546 #10	CYP21A2 (ENSGGOG00000042419) #11	ENSGGOG00000039460 #12	ENSGGOG00000002280 #13	DXO (ENSGGOG00000002277) #14	SKIC2 (ENSGGOG00000002270) #15	NELFE (ENSGGOG00000002265) #16	CFB (ENSGGOG00000002254) #17	ZBTB12 (ENSGGOG00000015638) #19	EHMT2 (ENSGGOG00000026532) #20	SLC44A4 (ENSGGOG00000008972) #21	NEU1 (ENSGGOG00000008963) #22	HSPA1L (ENSGGOG00000027934) #24	LSM2 (ENSGGOG00000011383) #25	VARS1 (ENSGGOG00000011364) #26	VWA7 (ENSGGOG00000011354) #27	SAPCD1 (ENSGGOG00000011351) #28	MSH5 (ENSGGOG00000011338) #29	CLIC1 (ENSGGOG00000011331) #30	DDAH2 (ENSGGOG00000011324) #31	MPIG6B (ENSGGOG00000005575) #32	LY6G6C (ENSGGOG00000022162) #33	LY6G6E (ENSGGOG00000009989) #35	ENSGGOG00000009984 #36	ABHD16A (ENSGGOG00000009970) #37	LY6G5C (ENSGGOG00000009963)	ENSGGOG00000005543
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.j #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418.g #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.a.a.b #36	ENSGT00390000007175 #35
Pan	ANCESTRAL SPECIES	5	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.j #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162418.g #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.a.b #36	ENSGT00390000007175 #35	ENSGT00940000160908 #37
Chimpanzee	MODERN SPECIES	19	ENSPTRG00000045997 #11	ENSPTRG00000052093 #10	ENSPTRG00000042453 #11	ENSPTRG00000044552 #12	ENSPTRG00000045611 #12	ENSPTRG00000045498 #14	ENSPTRG00000046780 #12	STK19 (ENSPTRG00000017999) #13	ENSPTRG00000052503 #14	SKIC2 (ENSPTRG00000017997) #15	NELFE (ENSPTRG00000017996) #16	C2 (ENSPTRG00000017994) #17	ZBTB12 (ENSPTRG00000017993) #19	EHMT2 (ENSPTRG00000017992) #20	SLC44A4 (ENSPTRG00000017991) #21	NEU1 (ENSPTRG00000017990) #22	ENSPTRG00000017989	ENSPTRG00000029753	HSPA1L (ENSPTRG00000029754) #24	LSM2 (ENSPTRG00000017986) #25	VARS1 (ENSPTRG00000017985) #26	VWA7 (ENSPTRG00000017984) #27	SAPCD1 (ENSPTRG00000033893) #28	MSH5 (ENSPTRG00000017983) #29	CLIC1 (ENSPTRG00000017982) #30	DDAH2 (ENSPTRG00000034085) #31	MPIG6B (ENSPTRG00000017980) #32	LY6G6C (ENSPTRG00000050859) #33	ENSPTRG00000017979 #35	ENSPTRG00000017978 #36	ABHD16A (ENSPTRG00000017977) #37
Bonobo	MODERN SPECIES	19	PPT2 (ENSPPAG00000043555) #7	PRRT1 (ENSPPAG00000033990) #8	FKBPL (ENSPPAG00000024362)	ATF6B (ENSPPAG00000033378) #9	ENSPPAG00000042311 #10	ENSPPAG00000043471 #11	ENSPPAG00000032907 #12	ENSPPAG00000036454 #13	DXO (ENSPPAG00000041236) #14	SKIC2 (ENSPPAG00000040211) #15	NELFE (ENSPPAG00000039942) #16	ENSPPAG00000043444 #17	ZBTB12 (ENSPPAG00000033581) #19	EHMT2 (ENSPPAG00000030744) #20	SLC44A4 (ENSPPAG00000039346) #21	NEU1 (ENSPPAG00000037534) #22	ENSPPAG00000029378	HSPA1L (ENSPPAG00000011707) #24	LSM2 (ENSPPAG00000032431) #25	VARS1 (ENSPPAG00000034012) #26	VWA7 (ENSPPAG00000036620) #27	SAPCD1 (ENSPPAG00000022561) #28	MSH5 (ENSPPAG00000040149) #29	CLIC1 (ENSPPAG00000032689) #30	DDAH2 (ENSPPAG00000020023) #31	MPIG6B (ENSPPAG00000039362) #32	LY6G6C (ENSPPAG00000024591) #33	ENSPPAG00000036869 #35	ENSPPAG00000035577 #36	ABHD16A (ENSPPAG00000040009) #37	LY6G5C (ENSPPAG00000043902)
Human	MODERN SPECIES	18	ATF6B (ENSG00000213676) #9	TNXB (ENSG00000168477) #10	CYP21A2 (ENSG00000231852) #11	C4B (ENSG00000224389) #12	C4A (ENSG00000244731) #12	STK19 (ENSG00000204344) #13	DXO (ENSG00000204348) #14	SKIC2 (ENSG00000204351) #15	NELFE (ENSG00000204356) #16	CFB (ENSG00000243649) #17	ENSG00000244255	ZBTB12 (ENSG00000204366) #19	C2 (ENSG00000166278) #18	EHMT2 (ENSG00000204371) #20	SLC44A4 (ENSG00000204385) #21	NEU1 (ENSG00000204386) #22	HSPA1B (ENSG00000204388)	HSPA1A (ENSG00000204389)	HSPA1L (ENSG00000204390) #24	LSM2 (ENSG00000204392) #25	VARS1 (ENSG00000204394) #26	VWA7 (ENSG00000204396) #27	SAPCD1 (ENSG00000228727) #28	MSH5 (ENSG00000204410) #29	CLIC1 (ENSG00000213719) #30	DDAH2 (ENSG00000213722) #31	LY6G6C (ENSG00000204421) #33	MPIG6B (ENSG00000204420) #32	LY6G6D (ENSG00000244355) #34	LY6G6F-LY6G6D (ENSG00000250641)	LY6G6F (ENSG00000204424) #36
Orangutan	MODERN SPECIES	19	ENSPPYG00000016481 #8	FKBPL (ENSPPYG00000016480)	ATF6B (ENSPPYG00000016479) #9	ENSPPYG00000016478 #10	ENSPPYG00000016476 #11	ENSPPYG00000040445	ENSPPYG00000016474 #13	DXO (ENSPPYG00000016473) #14	SKIC2 (ENSPPYG00000016472) #15	NELFE (ENSPPYG00000016471) #16	CFB (ENSPPYG00000016470) #17	C2 (ENSPPYG00000016469) #18	ZBTB12 (ENSPPYG00000016468) #19	EHMT2 (ENSPPYG00000016467) #20	SLC44A4 (ENSPPYG00000016466) #21	NEU1 (ENSPPYG00000036759) #22	ENSPPYG00000016463	HSPA1L (ENSPPYG00000016462) #24	LSM2 (ENSPPYG00000016461) #25	VARS1 (ENSPPYG00000016460) #26	VWA7 (ENSPPYG00000016459) #27	SAPCD1 (ENSPPYG00000016458) #28	MSH5 (ENSPPYG00000016457) #29	CLIC1 (ENSPPYG00000016456) #30	DDAH2 (ENSPPYG00000016455) #31	MPIG6B (ENSPPYG00000016454) #32	LY6G6C (ENSPPYG00000036278) #33	ENSPPYG00000016452 #35	ENSPPYG00000016451 #36	ABHD16A (ENSPPYG00000016450) #37	LY6G5C (ENSPPYG00000016449)
Gibbon	MODERN SPECIES	10	PRRT1 (ENSNLEG00000006574) #8	FKBPL (ENSNLEG00000006572)	ATF6B (ENSNLEG00000006562) #9	TNXB (ENSNLEG00000006421) #10	ENSNLEG00000006561 #11	ENSNLEG00000033059 #11	ENSNLEG00000006490 #12	ENSNLEG00000006480 #13	DXO (ENSNLEG00000006470) #14	SKIC2 (ENSNLEG00000006451) #15	NELFE (ENSNLEG00000006449) #16	ENSNLEG00000006427 #17	ZBTB12 (ENSNLEG00000034429) #19	EHMT2 (ENSNLEG00000034730) #20	SLC44A4 (ENSNLEG00000006406) #21	NEU1 (ENSNLEG00000006395) #22	ENSNLEG00000027425	ENSNLEG00000006374 #24	LSM2 (ENSNLEG00000035542) #25	VARS1 (ENSNLEG00000006351) #26	VWA7 (ENSNLEG00000035155) #27	SAPCD1 (ENSNLEG00000006328) #28	MSH5 (ENSNLEG00000006268) #29	ENSNLEG00000034114 #30	DDAH2 (ENSNLEG00000006253) #31	ENSNLEG00000006251 #32	LY6G6C (ENSNLEG00000006247) #33	ENSNLEG00000027097 #35	LY6G6F (ENSNLEG00000006240) #36	ABHD16A (ENSNLEG00000006226) #37	LY6G5C (ENSNLEG00000031008)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT01030000235045	ENSGT00940000158338.i.a.a #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00900000143760	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT01030000235045	ENSGT00940000158338.i.a.a #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00610000087497	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00900000143760	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Cercopithecinae_b	ANCESTRAL SPECIES	49	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37	ENSGT00390000011513
Cercopithecinae_d	ANCESTRAL SPECIES	104	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000158338.i.b #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37	ENSGT00390000011513
Sooty mangabey	MODERN SPECIES	407														EHMT2 (ENSCATG00000044327) #20	SLC44A4 (ENSCATG00000034509) #21	NEU1 (ENSCATG00000038835) #22	HSPA1L (ENSCATG00000022181) #24	LSM2 (ENSCATG00000013737) #25	VARS1 (ENSCATG00000022394) #26	VWA7 (ENSCATG00000033106) #27	SAPCD1 (ENSCATG00000033410) #28	ENSCATG00000022905	MSH5 (ENSCATG00000034981) #29	CLIC1 (ENSCATG00000039844) #30	DDAH2 (ENSCATG00000040243) #31	MPIG6B (ENSCATG00000041131) #32	LY6G6C (ENSCATG00000041931) #33	ENSCATG00000042114 #35	LY6G6F (ENSCATG00000042176) #36	ABHD16A (ENSCATG00000042679) #37	LY6G5C (ENSCATG00000038541)
Drill	MODERN SPECIES	1350					ENSMLEG00000043295 #11	ENSMLEG00000038256 #11	ENSMLEG00000039539	STK19 (ENSMLEG00000031586) #13	DXO (ENSMLEG00000035257) #14	SKIC2 (ENSMLEG00000030512) #15	NELFE (ENSMLEG00000030245) #16	CFB (ENSMLEG00000030056) #17	C2 (ENSMLEG00000041630) #18	EHMT2 (ENSMLEG00000041773) #20	SLC44A4 (ENSMLEG00000014458) #21	NEU1 (ENSMLEG00000038202) #22	HSPA1L (ENSMLEG00000021869) #24	LSM2 (ENSMLEG00000037369) #25	VARS1 (ENSMLEG00000039307) #26	VWA7 (ENSMLEG00000031243) #27	ENSMLEG00000008907	SAPCD1 (ENSMLEG00000027426) #28	MSH5 (ENSMLEG00000043091) #29	CLIC1 (ENSMLEG00000032517) #30	DDAH2 (ENSMLEG00000035438) #31	MPIG6B (ENSMLEG00000042946) #32	LY6G6C (ENSMLEG00000042386) #33	ENSMLEG00000031690 #35	LY6G6F (ENSMLEG00000028871) #36	ABHD16A (ENSMLEG00000032365) #37	LY6G5C (ENSMLEG00000031241)
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000155739.k #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00900000143760	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Pig-tailed macaque	MODERN SPECIES	259	PPT2 (ENSMNEG00000039844) #7	PRRT1 (ENSMNEG00000042871) #8	FKBPL (ENSMNEG00000004346)	ATF6B (ENSMNEG00000028753) #9	ENSMNEG00000040667 #10	ENSMNEG00000019225 #11	ENSMNEG00000041718 #12	STK19 (ENSMNEG00000040878) #13	DXO (ENSMNEG00000032201) #14	SKIC2 (ENSMNEG00000044474) #15	NELFE (ENSMNEG00000032542) #16	CFB (ENSMNEG00000043601) #17	ZBTB12 (ENSMNEG00000022456) #19	EHMT2 (ENSMNEG00000036008) #20	SLC44A4 (ENSMNEG00000039530) #21	NEU1 (ENSMNEG00000031390) #22	HSPA1L (ENSMNEG00000002074) #24	LSM2 (ENSMNEG00000045355) #25	VARS1 (ENSMNEG00000042072) #26	VWA7 (ENSMNEG00000032211) #27	SAPCD1 (ENSMNEG00000033869) #28	ENSMNEG00000017724	MSH5 (ENSMNEG00000036432) #29	CLIC1 (ENSMNEG00000043962) #30	DDAH2 (ENSMNEG00000038233) #31	MPIG6B (ENSMNEG00000044443) #32	LY6G6C (ENSMNEG00000033639) #33	LY6G6F (ENSMNEG00000042161) #36	ENSMNEG00000031923 #35	ABHD16A (ENSMNEG00000034721) #37	LY6G5C (ENSMNEG00000044640)
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.i.a.b #11	ENSGT00940000155739.k #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Rhesus	MODERN SPECIES	14	PRRT1 (ENSMMUG00000016647) #8	FKBPL (ENSMMUG00000015230)	ATF6B (ENSMMUG00000015229) #9	TNXB (ENSMMUG00000000758) #10	CYP21A2 (ENSMMUG00000000755) #11	ENSMMUG00000049499 #12	ENSMMUG00000059791 #12	STK19 (ENSMMUG00000000747) #13	SKIC2 (ENSMMUG00000000736) #15	DXO (ENSMMUG00000000741) #14	NELFE (ENSMMUG00000000735) #16	CFB (ENSMMUG00000000729) #17	ZBTB12 (ENSMMUG00000011683) #19	EHMT2 (ENSMMUG00000011679) #20	SLC44A4 (ENSMMUG00000021708) #21	NEU1 (ENSMMUG00000021707) #22	ENSMMUG00000064499	ENSMMUG00000041076	HSPA1L (ENSMMUG00000029822) #24	LSM2 (ENSMMUG00000006832) #25	VARS1 (ENSMMUG00000006828) #26	VWA7 (ENSMMUG00000006827) #27	SAPCD1 (ENSMMUG00000045974) #28	MSH5 (ENSMMUG00000009702) #29	CLIC1 (ENSMMUG00000029827) #30	DDAH2 (ENSMMUG00000044472) #31	MPIG6B (ENSMMUG00000015694) #32	ENSMMUG00000058534	LY6G6C (ENSMMUG00000015693) #33	LY6G6F (ENSMMUG00000053324) #36	ENSMMUG00000039268 #35
Crab-eating macaque	MODERN SPECIES	14	ENSMFAG00000002351 #10	ENSMFAG00000053747 #10	CYP21A2 (ENSMFAG00000002347) #11	ENSMFAG00000059643 #10	ENSMFAG00000063910 #11	ENSMFAG00000003345 #12	STK19 (ENSMFAG00000038817) #13	DXO (ENSMFAG00000042173) #14	SKIC2 (ENSMFAG00000034235) #15	NELFE (ENSMFAG00000036108) #16	CFB (ENSMFAG00000059371) #17	C2 (ENSMFAG00000002495) #18	ZBTB12 (ENSMFAG00000010877) #19	EHMT2 (ENSMFAG00000032125) #20	SLC44A4 (ENSMFAG00000041119) #21	NEU1 (ENSMFAG00000046189) #22	ENSMFAG00000053423	ENSMFAG00000039068	HSPA1L (ENSMFAG00000000455) #24	LSM2 (ENSMFAG00000001016) #25	VARS1 (ENSMFAG00000001032) #26	SAPCD1 (ENSMFAG00000054453) #28	VWA7 (ENSMFAG00000039665) #27	ENSMFAG00000000084	MSH5 (ENSMFAG00000033904) #29	ENSMFAG00000032315 #30	DDAH2 (ENSMFAG00000035624) #31	MPIG6B (ENSMFAG00000036544) #32	LY6G6C (ENSMFAG00000062054) #33	ENSMFAG00000053234 #34	ENSMFAG00000032622 #35
Vervet Monkey	MODERN SPECIES	8	AGPAT1 (ENSCSAG00000009289)	PPT2 (ENSCSAG00000009272) #7	PRRT1 (ENSCSAG00000009248) #8	FKBPL (ENSCSAG00000019309)	ATF6B (ENSCSAG00000009237) #9	TNXB (ENSCSAG00000009220) #10	CYP21A2 (ENSCSAG00000009155) #11	ENSCSAG00000009110 #12	STK19 (ENSCSAG00000009027) #13	DXO (ENSCSAG00000009007) #14	SKIC2 (ENSCSAG00000008988) #15	NELFE (ENSCSAG00000008969) #16	CFB (ENSCSAG00000008908) #17	EHMT2 (ENSCSAG00000008851) #20	SLC44A4 (ENSCSAG00000008833) #21	NEU1 (ENSCSAG00000008815) #22	ENSCSAG00000008807	ENSCSAG00000019310	HSPA1L (ENSCSAG00000019311) #24	LSM2 (ENSCSAG00000008800) #25	VARS1 (ENSCSAG00000008784) #26	VWA7 (ENSCSAG00000008740) #27	SAPCD1 (ENSCSAG00000008729) #28	MSH5 (ENSCSAG00000008713) #29	CLIC1 (ENSCSAG00000008687) #30	DDAH2 (ENSCSAG00000008675) #31	MPIG6B (ENSCSAG00000008668) #32	LY6G6C (ENSCSAG00000008659) #33	LY6G6F (ENSCSAG00000008648) #36	ABHD16A (ENSCSAG00000008633) #37	LY6G5C (ENSCSAG00000008618)
Rhinopithecus	ANCESTRAL SPECIES	123								ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917.c #16	ENSGT00940000158605.fb #17	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00390000012976.c.b.b.b.a.b.c.b	ENSGT00610000087497	ENSGT00940000162096 #24	ENSGT00390000016597.q.a #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00900000143760	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.a.b #36	ENSGT00390000007175 #35
Golden snub-nosed monkey	MODERN SPECIES	2414							ENSRROG00000033067	ENSRROG00000042148 #12	STK19 (ENSRROG00000040538) #13	DXO (ENSRROG00000035555) #14	SKIC2 (ENSRROG00000036429) #15	NELFE (ENSRROG00000041993) #16	CFB (ENSRROG00000031058) #17	EHMT2 (ENSRROG00000028913) #20	SLC44A4 (ENSRROG00000030634) #21	NEU1 (ENSRROG00000023915) #22	ENSRROG00000028785	ENSRROG00000045141	ENSRROG00000001634 #24	LSM2 (ENSRROG00000030345) #25	VARS1 (ENSRROG00000045490) #26	VWA7 (ENSRROG00000042330) #27	SAPCD1 (ENSRROG00000033563) #28	MSH5 (ENSRROG00000033293) #29	CLIC1 (ENSRROG00000024225) #30	DDAH2 (ENSRROG00000033495) #31	MPIG6B (ENSRROG00000043021) #32	LY6G6C (ENSRROG00000031504) #33	LY6G6F (ENSRROG00000034734) #36	ENSRROG00000009336 #35	ENSRROG00000040885
Black snub-nosed monkey	MODERN SPECIES	2001									STK19 (ENSRBIG00000031144) #13	DXO (ENSRBIG00000044693) #14	SKIC2 (ENSRBIG00000035485) #15	ENSRBIG00000028593 #16	CFB (ENSRBIG00000027009) #17	EHMT2 (ENSRBIG00000039842) #20	SLC44A4 (ENSRBIG00000030820) #21	NEU1 (ENSRBIG00000034622) #22	ENSRBIG00000042220	ENSRBIG00000031960	HSPA1L (ENSRBIG00000009659) #24	LSM2 (ENSRBIG00000010172) #25	VARS1 (ENSRBIG00000041669) #26	VWA7 (ENSRBIG00000039101) #27	SAPCD1 (ENSRBIG00000044186) #28	ENSRBIG00000004381	MSH5 (ENSRBIG00000027560) #29	CLIC1 (ENSRBIG00000042159) #30	DDAH2 (ENSRBIG00000023949) #31	MPIG6B (ENSRBIG00000041565) #32	LY6G6C (ENSRBIG00000039417) #33	LY6G6F (ENSRBIG00000028754) #36	ENSRBIG00000005265 #35
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Cebidae	ANCESTRAL SPECIES	39	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Marmoset	MODERN SPECIES	16	ENSCJAG00000001969	PRRT1 (ENSCJAG00000002001) #8	FKBPL (ENSCJAG00000002003)	ATF6B (ENSCJAG00000036009) #9	TNXB (ENSCJAG00000002050) #10	CYP21A2 (ENSCJAG00000002074) #11	ENSCJAG00000068335 #12	STK19 (ENSCJAG00000002228) #13	DXO (ENSCJAG00000002246) #14	NELFE (ENSCJAG00000002368) #16	SKIC2 (ENSCJAG00000002263) #15	C2 (ENSCJAG00000002416) #18	ZBTB12 (ENSCJAG00000044185) #19	EHMT2 (ENSCJAG00000037618) #20	SLC44A4 (ENSCJAG00000002493) #21	NEU1 (ENSCJAG00000036139) #22	ENSCJAG00000039800	ENSCJAG00000081949	LSM2 (ENSCJAG00000080887) #25	VARS1 (ENSCJAG00000002604) #26	VWA7 (ENSCJAG00000002647) #27	SAPCD1 (ENSCJAG00000042253) #28	MSH5 (ENSCJAG00000002698) #29	ENSCJAG00000002788 #30	DDAH2 (ENSCJAG00000002823) #31	LY6G6C (ENSCJAG00000053870) #33	MPIG6B (ENSCJAG00000002843) #32	ENSCJAG00000002898 #34	ENSCJAG00000053728 #35	LY6G6F (ENSCJAG00000045693) #36	ABHD16A (ENSCJAG00000002906) #37
Cebidae_a	ANCESTRAL SPECIES	80	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.eb.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Bolivian squirrel monkey	MODERN SPECIES	252	EGFL8 (ENSSBOG00000027721)	PPT2 (ENSSBOG00000021673) #7	ENSSBOG00000030972 #8	ATF6B (ENSSBOG00000021738) #9	TNXB (ENSSBOG00000010738) #10	CYP21A2 (ENSSBOG00000034162) #11	ENSSBOG00000021536 #12	STK19 (ENSSBOG00000033781) #13	DXO (ENSSBOG00000035395) #14	SKIC2 (ENSSBOG00000027920) #15	NELFE (ENSSBOG00000035865) #16	CFB (ENSSBOG00000025733) #17	C2 (ENSSBOG00000021309) #18	EHMT2 (ENSSBOG00000020490) #20	SLC44A4 (ENSSBOG00000031690) #21	NEU1 (ENSSBOG00000023611) #22	ENSSBOG00000028735	LSM2 (ENSSBOG00000018943) #25	VARS1 (ENSSBOG00000035402) #26	VWA7 (ENSSBOG00000020661) #27	SAPCD1 (ENSSBOG00000027091) #28	MSH5 (ENSSBOG00000031485) #29	CLIC1 (ENSSBOG00000020805) #30	DDAH2 (ENSSBOG00000024632) #31	MPIG6B (ENSSBOG00000019605) #32	LY6G6C (ENSSBOG00000035634) #33	ENSSBOG00000025224 #35	LY6G6F (ENSSBOG00000023678) #36	ABHD16A (ENSSBOG00000025562) #37	LY6G5C (ENSSBOG00000034599)	LY6G5B (ENSSBOG00000031755)
Capuchin	MODERN SPECIES	24	PRRT1 (ENSCCAG00000026817) #8	FKBPL (ENSCCAG00000020416)	ATF6B (ENSCCAG00000023021) #9	TNXB (ENSCCAG00000027168) #10	CYP21A2 (ENSCCAG00000024263) #11	ENSCCAG00000028298 #12	STK19 (ENSCCAG00000026720) #13	DXO (ENSCCAG00000036575) #14	SKIV2L (ENSCCAG00000026206) #15	NELFE (ENSCCAG00000014945) #16	CFB (ENSCCAG00000035631) #17	C2 (ENSCCAG00000028748) #18	ZBTB12 (ENSCCAG00000019304) #19	EHMT2 (ENSCCAG00000035929) #20	SLC44A4 (ENSCCAG00000024839) #21	NEU1 (ENSCCAG00000026584) #22	ENSCCAG00000027280	HSPA1L (ENSCCAG00000001666) #24	LSM2 (ENSCCAG00000024276) #25	VARS1 (ENSCCAG00000035656) #26	VWA7 (ENSCCAG00000017708) #27	ENSCCAG00000026876	SAPCD1 (ENSCCAG00000037431) #28	MSH5 (ENSCCAG00000034064) #29	ENSCCAG00000030637 #30	DDAH2 (ENSCCAG00000033427) #31	MPIG6B (ENSCCAG00000019265) #32	LY6G6C (ENSCCAG00000030503) #33	LY6G6D (ENSCCAG00000034557) #34	ENSCCAG00000031979 #35	LY6G6F (ENSCCAG00000021945) #36
Mas night monkey	MODERN SPECIES	1139	PRRT1 (ENSANAG00000033640) #8	FKBPL (ENSANAG00000018370)	ATF6B (ENSANAG00000036852) #9	TNXB (ENSANAG00000037382) #10	CYP21A2 (ENSANAG00000022107) #11	ENSANAG00000023102 #12	STK19 (ENSANAG00000035126) #13	DXO (ENSANAG00000020757) #14	SKIC2 (ENSANAG00000037992) #15	NELFE (ENSANAG00000038256) #16	CFB (ENSANAG00000024762) #17	C2 (ENSANAG00000029092) #18	ZBTB12 (ENSANAG00000019564) #19	EHMT2 (ENSANAG00000025041) #20	SLC44A4 (ENSANAG00000025696) #21	NEU1 (ENSANAG00000031154) #22	ENSANAG00000029391	HSPA1L (ENSANAG00000017246) #24	LSM2 (ENSANAG00000028372) #25	VARS1 (ENSANAG00000015453) #26	VWA7 (ENSANAG00000030320) #27	SAPCD1 (ENSANAG00000025920) #28	MSH5 (ENSANAG00000029188) #29	CLIC1 (ENSANAG00000032280) #30	DDAH2 (ENSANAG00000038278) #31	MPIG6B (ENSANAG00000023599) #32	LY6G6C (ENSANAG00000033037) #33	ENSANAG00000033731 #34	ENSANAG00000031985 #35	LY6G6F (ENSANAG00000035531) #36	ABHD16A (ENSANAG00000024153) #37
Tarsier	MODERN SPECIES	6303	EGFL8 (ENSTSYG00000019339)	PPT2 (ENSTSYG00000002885) #7	ENSTSYG00000031616 #8	ATF6B (ENSTSYG00000003325) #9	TNXB (ENSTSYG00000013164) #10	CYP21A2 (ENSTSYG00000013158) #11	ENSTSYG00000006110 #12	STK19 (ENSTSYG00000036103) #13	DXO (ENSTSYG00000037337) #14	SKIV2L (ENSTSYG00000012133) #15	NELFE (ENSTSYG00000012132) #16	CFB (ENSTSYG00000012131) #17	C2 (ENSTSYG00000012101) #18	EHMT2 (ENSTSYG00000034308) #20	SLC44A4 (ENSTSYG00000001852) #21	NEU1 (ENSTSYG00000001850) #22	ENSTSYG00000034529
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.a.a ##36
Tree shrew	MODERN SPECIES	5181																NEU1 (ENSTBEG00000011924) #22
Glires	ANCESTRAL SPECIES	5	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.a.a ##36
Lagomorpha	ANCESTRAL SPECIES	62	ENSGT00410000027091	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.a.a ##36	ENSGT00940000174223	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Pika	DUPLICATION
Pika	MODERN SPECIES	9768																ENSOPRG00000015026 #22
Pika	MODERN SPECIES	4594	RNF5 (ENSOPRG00000004366)	ENSOPRG00000004338 #7	ENSOPRG00000004308	FKBPL (ENSOPRG00000004299)	ATF6B (ENSOPRG00000019053) #9	ENSOPRG00000018833	TNXB (ENSOPRG00000004199) #10	CYP21A2 (ENSOPRG00000004173) #11	ENSOPRG00000004052 #12	SKIC2 (ENSOPRG00000003972) #15	NELFE (ENSOPRG00000003942) #16	CFB (ENSOPRG00000003908) #17	C2 (ENSOPRG00000003873) #18	EHMT2 (ENSOPRG00000003803) #20	SLC44A4 (ENSOPRG00000003759) #21	ENSOPRG00000003743 #22	ENSOPRG00000003716	LSM2 (ENSOPRG00000003668) #25	VARS1 (ENSOPRG00000003607) #26	VWA7 (ENSOPRG00000003559) #27	SAPCD1 (ENSOPRG00000018415) #28	MSH5 (ENSOPRG00000003510) #29	DDAH2 (ENSOPRG00000003489) #31	MPIG6B (ENSOPRG00000003466) #32	LY6G6C (ENSOPRG00000003454) #33	ENSOPRG00000003438	ENSOPRG00000003409 #36	ABHD16A (ENSOPRG00000003368) #37	ENSOPRG00000003317
Rodentia	ANCESTRAL SPECIES	6	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Muroidea	ANCESTRAL SPECIES	15	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36	ENSGT00940000160908 #37
Cricetinae	ANCESTRAL SPECIES	43	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36	ENSGT00940000160908 #37	ENSGT00390000003781.e.b
Chinese hamster chok1gshd	MODERN SPECIES	303	Fkbpl (ENSCGRG00001003151)	Atf6b (ENSCGRG00001012473) #9	Tnxb (ENSCGRG00001021481) #10	Cyp21a1 (ENSCGRG00001019003) #11	C4b (ENSCGRG00001019658) #12	Stk19 (ENSCGRG00001000387) #13	Dxo (ENSCGRG00001001718) #14	Skic2 (ENSCGRG00001008385) #15	Nelfe (ENSCGRG00001016608) #16	Cfb (ENSCGRG00001020632) #17	C2 (ENSCGRG00001005331) #18	ENSCGRG00001001109	Zbtb12 (ENSCGRG00001002052) #19	Ehmt2 (ENSCGRG00001022736) #20	Slc44a4 (ENSCGRG00001020159) #21	Neu1 (ENSCGRG00001010017) #22	Hspa1l (ENSCGRG00001000703) #24	Lsm2 (ENSCGRG00001013932) #25	Vars (ENSCGRG00001005686) #26	Vwa7 (ENSCGRG00001024017) #27	Sapcd1 (ENSCGRG00001001962) #28	Msh5 (ENSCGRG00001022358) #29	ENSCGRG00001005949 #30	Ddah2 (ENSCGRG00001013784) #31	Mpig6b (ENSCGRG00001000218) #32	Ly6g6c (ENSCGRG00001019394) #33	Ly6g6d (ENSCGRG00001009978) #34	Ly6g6e (ENSCGRG00001017928) #35	Ly6g6f (ENSCGRG00001009267) ##36	Abhd16a (ENSCGRG00001012878) #37	Csnk2b (ENSCGRG00001003014)
Golden Hamster	MODERN SPECIES	856	Agpat1 (ENSMAUG00000011278)	Egfl8 (ENSMAUG00000013647)	Ppt2 (ENSMAUG00000010078) #7	ENSMAUG00000019956 #8	ENSMAUG00000014704	Tnxb (ENSMAUG00000019386) #10	Cyp21a1 (ENSMAUG00000022007) #11	C4b (ENSMAUG00000015130) #12	Dxo (ENSMAUG00000022102) #14	Skic2 (ENSMAUG00000018613) #15	Nelfe (ENSMAUG00000016812) #16	Cfb (ENSMAUG00000005083) #17	Zbtb12 (ENSMAUG00000008051) #19	Ehmt2 (ENSMAUG00000021721) #20	Slc44a4 (ENSMAUG00000016147) #21	Neu1 (ENSMAUG00000006425) #22	ENSMAUG00000007504	Hspa1l (ENSMAUG00000015361) #24	Lsm2 (ENSMAUG00000021966) #25	Vars (ENSMAUG00000006715) #26	Vwa7 (ENSMAUG00000012692) #27	Sapcd1 (ENSMAUG00000012648) #28	Msh5 (ENSMAUG00000016112) #29	Clic1 (ENSMAUG00000021659) #30	Ddah2 (ENSMAUG00000000563) #31	Mpig6b (ENSMAUG00000000529) #32	Ly6g6c (ENSMAUG00000014579) #33	Ly6g6d (ENSMAUG00000009349) #34	Ly6g6f (ENSMAUG00000020056) ##36	Abhd16a (ENSMAUG00000012397) #37	Csnk2b (ENSMAUG00000021192)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36	ENSGT00940000160908 #37
Prairie vole	MODERN SPECIES	170	Egfl8 (ENSMOCG00000008165)	Ppt2 (ENSMOCG00000012081) #7	Prrt1 (ENSMOCG00000019137) #8	Fkbpl (ENSMOCG00000005479)	ENSMOCG00000000322	Tnxb (ENSMOCG00000010394) #10	Cyp21a1 (ENSMOCG00000016151) #11	Stk19 (ENSMOCG00000021590) #13	Dxo (ENSMOCG00000005928) #14	Skic2 (ENSMOCG00000014240) #15	Nelfe (ENSMOCG00000003723) #16	Cfb (ENSMOCG00000001320) #17	Zbtb12 (ENSMOCG00000002711) #19	Ehmt2 (ENSMOCG00000015390) #20	Slc44a4 (ENSMOCG00000016917) #21	Neu1 (ENSMOCG00000012259) #22	ENSMOCG00000005617	Hspa1l (ENSMOCG00000003223) #24	Lsm2 (ENSMOCG00000015306) #25	Vars (ENSMOCG00000015404) #26	Vwa7 (ENSMOCG00000010617) #27	Sapcd1 (ENSMOCG00000000928) #28	Msh5 (ENSMOCG00000022918) #29	Clic1 (ENSMOCG00000017714) #30	Ddah2 (ENSMOCG00000011844) #31	Mpig6b (ENSMOCG00000022391) #32	Ly6g6c (ENSMOCG00000016036) #33	Ly6g6d (ENSMOCG00000006983) #34	Ly6g6e (ENSMOCG00000004129) #35	Ly6g6f (ENSMOCG00000000339) ##36	Abhd16a (ENSMOCG00000011271) #37
Northern American deer mouse	MODERN SPECIES	13	Ppt2 (ENSPEMG00000008644) #7	Prrt1 (ENSPEMG00000016595) #8	Fkbpl (ENSPEMG00000017009)	Atf6b (ENSPEMG00000019061) #9	Tnxb (ENSPEMG00000004596) #10	Cyp21a1 (ENSPEMG00000014963) #11	Dxo (ENSPEMG00000009229) #14	Stk19 (ENSPEMG00000015476) #13	Skic2 (ENSPEMG00000019001) #15	Nelfe (ENSPEMG00000015423) #16	Cfb (ENSPEMG00000017834) #17	C2 (ENSPEMG00000031051) #18	Zbtb12 (ENSPEMG00000028249) #19	Ehmt2 (ENSPEMG00000011404) #20	Slc44a4 (ENSPEMG00000011491) #21	Neu1 (ENSPEMG00000009374) #22	ENSPEMG00000027556	ENSPEMG00000028093	Hspa1l (ENSPEMG00000010938) #24	Lsm2 (ENSPEMG00000026796) #25	Vars (ENSPEMG00000006639) #26	Vwa7 (ENSPEMG00000004592) #27	Sapcd1 (ENSPEMG00000030346) #28	Msh5 (ENSPEMG00000015565) #29	Clic1 (ENSPEMG00000016556) #30	Ddah2 (ENSPEMG00000009545) #31	Mpig6b (ENSPEMG00000009149) #32	Ly6g6c (ENSPEMG00000012722) #33	Ly6g6d (ENSPEMG00000006406) #34	Ly6g6e (ENSPEMG00000018140) #35	Ly6g6f (ENSPEMG00000007568) ##36
Murinae	ANCESTRAL SPECIES	18	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Mus	ANCESTRAL SPECIES	16	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Mus_A	ANCESTRAL SPECIES	10	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Mus_B	ANCESTRAL SPECIES	9	ENSGT00390000008726.h.b	ENSGT00940000162975	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00390000018295 #13	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Steppe mouse	MODERN SPECIES	2394									ENSMSIG00000029826 #14	Skic2 (ENSMSIG00000029811) #15	Nelfe (ENSMSIG00000029798) #16	Cfb (ENSMSIG00000029773) #17	C2 (ENSMSIG00000029738) #18	Ehmt2 (ENSMSIG00000016591) #20	Slc44a4 (ENSMSIG00000016390) #21	Neu1 (ENSMSIG00000016370) #22	ENSMSIG00000016339	ENSMSIG00000016335	ENSMSIG00000016326	ENSMSIG00000016321	ENSMSIG00000016268 #25	ENSMSIG00000016261	Vars (ENSMSIG00000006467) #26	Vwa7 (ENSMSIG00000006167) #27	Sapcd1 (ENSMSIG00000006135) #28	Msh5 (ENSMSIG00000006018) #29	Clic1 (ENSMSIG00000005986) #30	Ddah2 (ENSMSIG00000005953) #31	ENSMSIG00000005916 #32	Ly6g6c (ENSMSIG00000005875) #33	Ly6g6e (ENSMSIG00000005853) #35
spretus	MODERN SPECIES	8	Prrt1 (MGP_SPRETEiJ_G0022375) #8	Fkbpl (MGP_SPRETEiJ_G0022376)	Atf6b (MGP_SPRETEiJ_G0022377) #9	MGP_SPRETEiJ_G0022378 #12	MGP_SPRETEiJ_G0022379 #13	MGP_SPRETEiJ_G0022380 #11	Dxo (MGP_SPRETEiJ_G0022381) #14	Skic2 (MGP_SPRETEiJ_G0022382) #15	Nelfe (MGP_SPRETEiJ_G0022383) #16	MGP_SPRETEiJ_G0022384 #17	MGP_SPRETEiJ_G0022385 #17	C2 (MGP_SPRETEiJ_G0022386) #18	Zbtb12 (MGP_SPRETEiJ_G0022387) #19	Ehmt2 (MGP_SPRETEiJ_G0022388) #20	Slc44a4 (MGP_SPRETEiJ_G0022389) #21	Neu1 (MGP_SPRETEiJ_G0022390) #22	MGP_SPRETEiJ_G0022391	MGP_SPRETEiJ_G0022392	MGP_SPRETEiJ_G0022393	Hspa1l (MGP_SPRETEiJ_G0022394) #24	Lsm2 (MGP_SPRETEiJ_G0022395) #25	Vars (MGP_SPRETEiJ_G0022396) #26	Vwa7 (MGP_SPRETEiJ_G0022397) #27	Sapcd1 (MGP_SPRETEiJ_G0022398) #28	Msh5 (MGP_SPRETEiJ_G0022399) #29	Clic1 (MGP_SPRETEiJ_G0022400) #30	Ddah2 (MGP_SPRETEiJ_G0022401) #31	Mpig6b (MGP_SPRETEiJ_G0022402) #32	Ly6g6c (MGP_SPRETEiJ_G0022403) #33	Ly6g6d (MGP_SPRETEiJ_G0022404) #34	Ly6g6e (MGP_SPRETEiJ_G0022405) #35
Mouse	MODERN SPECIES	8	Fkbpl (ENSMUSG00000033739)	Atf6b (ENSMUSG00000015461) #9	Tnxb (ENSMUSG00000033327) #10	C4b (ENSMUSG00000073418) #12	Cyp21a1 (ENSMUSG00000024365) #11	Stk19 (ENSMUSG00000061207) #13	Dxo (ENSMUSG00000040482) #14	Skic2 (ENSMUSG00000040356) #15	Nelfe (ENSMUSG00000024369) #16	Cfb (ENSMUSG00000090231) #17	Gm20547 (ENSMUSG00000092511)	C2 (ENSMUSG00000024371) #18	Zbtb12 (ENSMUSG00000049823) #19	Ehmt2 (ENSMUSG00000013787) #20	Slc44a4 (ENSMUSG00000007034) #21	Neu1 (ENSMUSG00000007038) #22	Hspa1b (ENSMUSG00000090877)	Hspa1a (ENSMUSG00000091971)	Hspa1l (ENSMUSG00000007033) #24	Lsm2 (ENSMUSG00000007050) #25	Vars (ENSMUSG00000007029) #26	Vwa7 (ENSMUSG00000007030) #27	Sapcd1 (ENSMUSG00000036185) #28	Msh5 (ENSMUSG00000007035) #29	Clic1 (ENSMUSG00000007041) #30	Ddah2 (ENSMUSG00000007039) #31	Mpig6b (ENSMUSG00000073414) #32	Ly6g6c (ENSMUSG00000092586) #33	Ly6g6d (ENSMUSG00000073413) #34	Ly6g6e (ENSMUSG00000013766) #35	Ly6g6f (ENSMUSG00000034923) ##36
Ryukyu mouse	MODERN SPECIES	8	Fkbpl (MGP_CAROLIEiJ_G0021470)	Atf6b (MGP_CAROLIEiJ_G0021471) #9	Tnxb (MGP_CAROLIEiJ_G0021472) #10	Cyp21a1 (MGP_CAROLIEiJ_G0021473) #11	C4b (MGP_CAROLIEiJ_G0021474) #12	Stk19 (MGP_CAROLIEiJ_G0021475) #13	Dxo (MGP_CAROLIEiJ_G0021476) #14	Skic2 (MGP_CAROLIEiJ_G0021477) #15	Nelfe (MGP_CAROLIEiJ_G0021478) #16	MGP_CAROLIEiJ_G0021479 #17	MGP_CAROLIEiJ_G0021480 #17	C2 (MGP_CAROLIEiJ_G0021481) #18	Zbtb12 (MGP_CAROLIEiJ_G0021482) #19	Ehmt2 (MGP_CAROLIEiJ_G0021483) #20	Slc44a4 (MGP_CAROLIEiJ_G0021484) #21	Neu1 (MGP_CAROLIEiJ_G0021485) #22	MGP_CAROLIEiJ_G0021486	MGP_CAROLIEiJ_G0021487	MGP_CAROLIEiJ_G0021488	Hspa1l (MGP_CAROLIEiJ_G0021489) #24	Lsm2 (MGP_CAROLIEiJ_G0021490) #25	Vars (MGP_CAROLIEiJ_G0021491) #26	Vwa7 (MGP_CAROLIEiJ_G0021492) #27	Sapcd1 (MGP_CAROLIEiJ_G0021493) #28	Msh5 (MGP_CAROLIEiJ_G0021494) #29	Clic1 (MGP_CAROLIEiJ_G0021495) #30	Ddah2 (MGP_CAROLIEiJ_G0021496) #31	Mpig6b (MGP_CAROLIEiJ_G0021497) #32	Ly6g6c (MGP_CAROLIEiJ_G0021498) #33	Ly6g6d (MGP_CAROLIEiJ_G0021499) #34	Ly6g6e (MGP_CAROLIEiJ_G0021500) #35
Shrew mouse	MODERN SPECIES	9	Fkbpl (MGP_PahariEiJ_G0020465)	Atf6b (MGP_PahariEiJ_G0020466) #9	Tnxb (MGP_PahariEiJ_G0020467) #10	Cyp21a1 (MGP_PahariEiJ_G0020468) #11	C4b (MGP_PahariEiJ_G0020469) #12	Stk19 (MGP_PahariEiJ_G0020470) #13	Dxo (MGP_PahariEiJ_G0020471) #14	Skic2 (MGP_PahariEiJ_G0020472) #15	Nelfe (MGP_PahariEiJ_G0020473) #16	MGP_PahariEiJ_G0020474 #17	MGP_PahariEiJ_G0020475 #17	C2 (MGP_PahariEiJ_G0020476) #18	Zbtb12 (MGP_PahariEiJ_G0020477) #19	Ehmt2 (MGP_PahariEiJ_G0020478) #20	Slc44a4 (MGP_PahariEiJ_G0020479) #21	Neu1 (MGP_PahariEiJ_G0020480) #22	MGP_PahariEiJ_G0020481	MGP_PahariEiJ_G0020482	MGP_PahariEiJ_G0020483	Hspa1l (MGP_PahariEiJ_G0020484) #24	Lsm2 (MGP_PahariEiJ_G0020485) #25	Vars (MGP_PahariEiJ_G0020486) #26	Vwa7 (MGP_PahariEiJ_G0020487) #27	Sapcd1 (MGP_PahariEiJ_G0020488) #28	Msh5 (MGP_PahariEiJ_G0020489) #29	Clic1 (MGP_PahariEiJ_G0020490) #30	Ddah2 (MGP_PahariEiJ_G0020491) #31	Mpig6b (MGP_PahariEiJ_G0020492) #32	Ly6g6c (MGP_PahariEiJ_G0020493) #33	Ly6g6d (MGP_PahariEiJ_G0020494) #34	MGP_PahariEiJ_G0020495 #35
Rat	MODERN SPECIES	12	Egfl8 (ENSRNOG00000000436)	Ppt2 (ENSRNOG00000000435) #7	Prrt1 (ENSRNOG00000000433) #8	Fkbpl (ENSRNOG00000000432)	Atf6b (ENSRNOG00000000431) #9	AABR07044388.2 (ENSRNOG00000033581) #10	Cyp21a1 (ENSRNOG00000000428) #11	C4a (ENSRNOG00000066573) #12	Stk19 (ENSRNOG00000048929) #13	Dxo (ENSRNOG00000000422) #14	Skic2 (ENSRNOG00000000421) #15	Nelfe (ENSRNOG00000000420) #16	Cfb (ENSRNOG00000051235) #18	Ehmt2 (ENSRNOG00000030630) #20	Slc44a4 (ENSRNOG00000000878) #21	Neu1 (ENSRNOG00000032942) #22	ENSRNOG00000067018	Hspa1b (ENSRNOG00000050647)	Hspa1a (ENSRNOG00000045654)	Hspa1l (ENSRNOG00000047966) #24	Lsm2 (ENSRNOG00000048725) #25	Vars1 (ENSRNOG00000000867) #26	Vwa7 (ENSRNOG00000000860) #27	Sapcd1 (ENSRNOG00000000858) #28	Msh5 (ENSRNOG00000000857) #29	Ddah2 (ENSRNOG00000000842) #31	Clic1 (ENSRNOG00000029682) #30	Mpig6b (ENSRNOG00000026936) #32	Ly6g6c (ENSRNOG00000070605) #33	Ly6g6e (ENSRNOG00000027157) #35	Ly6g6d (ENSRNOG00000027225) ##36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1767	Prrt1 (ENSNGAG00000006079) #8	Fkbpl (ENSNGAG00000010616)	ENSNGAG00000023473 #9	ENSNGAG00000020837	Tnxb (ENSNGAG00000000974) #10	Cyp21a1 (ENSNGAG00000013887) #11	C4b (ENSNGAG00000012712) #12	Stk19 (ENSNGAG00000024026) #13	Dxo (ENSNGAG00000021244) #14	ENSNGAG00000024121 #15	Nelfe (ENSNGAG00000016248) #16	Cfb (ENSNGAG00000009653) #17	Zbtb12 (ENSNGAG00000011842) #19	Ehmt2 (ENSNGAG00000023439) #20	Slc44a4 (ENSNGAG00000021975) #21	Neu1 (ENSNGAG00000016139) #22	Hspa1l (ENSNGAG00000000836) #24	Lsm2 (ENSNGAG00000003997) #25	Vars (ENSNGAG00000012151) #26	Vwa7 (ENSNGAG00000005246) #27	Sapcd1 (ENSNGAG00000022475) #28	Msh5 (ENSNGAG00000018979) #29	Clic1 (ENSNGAG00000023302) #30	Ddah2 (ENSNGAG00000002913) #31	Mpig6b (ENSNGAG00000021859) #32	Ly6g6c (ENSNGAG00000023350) #33	Ly6g6d (ENSNGAG00000022523) #34	Ly6g6e (ENSNGAG00000001035) #35	Ly6g6f (ENSNGAG00000004827) ##36	Abhd16a (ENSNGAG00000016298) #37	Ly6g5c (ENSNGAG00000018931)
Lesser Egyptian jerboa	MODERN SPECIES	220	Ager (ENSJJAG00000019529)	Rnf5 (ENSJJAG00000019313)	Agpat1 (ENSJJAG00000018999)	Ppt2 (ENSJJAG00000018803) #7	Prrt1 (ENSJJAG00000018708) #8	Atf6b (ENSJJAG00000013700) #9	Tnxb (ENSJJAG00000011509) #10	C4b (ENSJJAG00000019955) #12	Stk19 (ENSJJAG00000016628) #13	Dxo (ENSJJAG00000016118) #14	ENSJJAG00000015952 #15	Nelfe (ENSJJAG00000014005) #16	Cfb (ENSJJAG00000020383) #17	Ehmt2 (ENSJJAG00000011038) #20	Slc44a4 (ENSJJAG00000017469) #21	Neu1 (ENSJJAG00000015681) #22	Or14j1 (ENSJJAG00000012525)	ENSJJAG00000013540	Gabbr1 (ENSJJAG00000010670)	Mog (ENSJJAG00000002510)	Rnf39 (ENSJJAG00000001427)	ENSJJAG00000000537	Trim10 (ENSJJAG00000000052)	Trim26 (ENSJJAG00000020786)	Trim39 (ENSJJAG00000020240)	Rpp21 (ENSJJAG00000011176)	Gnl1 (ENSJJAG00000010831)	Prr3 (ENSJJAG00000010607)	ENSJJAG00000010508	Ppp1r10 (ENSJJAG00000006676)	Mrps18b (ENSJJAG00000003794)
Kangaroo rat	MODERN SPECIES	519	Egfl8 (ENSDORG00000019824)	Ppt2 (ENSDORG00000029200) #7	Prrt1 (ENSDORG00000012924) #8	Fkbpl (ENSDORG00000004228)	Atf6b (ENSDORG00000004227) #9	ENSDORG00000009455 #10	ENSDORG00000009453 #11	C4b (ENSDORG00000011715) #12	Stk19 (ENSDORG00000011711) #13	Dxo (ENSDORG00000011708) #14	ENSDORG00000025296 #15	Nelfe (ENSDORG00000011705) #16	Cfb (ENSDORG00000011702) #17	Ehmt2 (ENSDORG00000011397) #20	Slc44a4 (ENSDORG00000011396) #21	Neu1 (ENSDORG00000011395) #22	ENSDORG00000016437	ENSDORG00000023875	Hspa1l (ENSDORG00000016436) #24	Lsm2 (ENSDORG00000026571) #25
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.s	ENSGT00390000006516	ENSGT00940000161215.t	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.s	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36	ENSGT00940000160908 #37
Guinea pig	MODERN SPECIES	15	ENSCPOG00000039598 #8	FKBPL (ENSCPOG00000039771)	ATF6B (ENSCPOG00000023551) #9	TNXB (ENSCPOG00000021313) #10	ENSCPOG00000002716 #11	ENSCPOG00000025944	ENSCPOG00000031422 #12	STK19 (ENSCPOG00000020451) #13	DXO (ENSCPOG00000015108) #14	SKIC2 (ENSCPOG00000001307) #15	NELFE (ENSCPOG00000031829) #16	CFB (ENSCPOG00000025340) #17	C2 (ENSCPOG00000021284) #18	EHMT2 (ENSCPOG00000014788) #20	SLC44A4 (ENSCPOG00000014782) #21	NEU1 (ENSCPOG00000014780) #22	ENSCPOG00000000974	ENSCPOG00000035597	HSPA1L (ENSCPOG00000035528) #24	LSM2 (ENSCPOG00000021053) #25	VARS1 (ENSCPOG00000000870) #26	VWA7 (ENSCPOG00000000869) #27	SAPCD1 (ENSCPOG00000024345) #28	MSH5 (ENSCPOG00000000868) #29	CLIC1 (ENSCPOG00000025841) #30	DDAH2 (ENSCPOG00000001824) #31	MPIG6B (ENSCPOG00000021071) #32	LY6G6C (ENSCPOG00000023366) #33	LY6G6D (ENSCPOG00000040085) #34	ENSCPOG00000039034 #35	ENSCPOG00000008520 ##36
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000158338 #11	ENSGT00940000155565 #10	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.s	ENSGT00940000162096 #24	ENSGT00390000016597.j #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36	ENSGT00940000160908 #37
Degu	MODERN SPECIES	46	PPT2 (ENSODEG00000017440) #7	ENSODEG00000017443 #8	ATF6B (ENSODEG00000017478) #9	ENSODEG00000020459	ENSODEG00000017498 #10	ENSODEG00000017692	STK19 (ENSODEG00000017509) #13	DXO (ENSODEG00000017552) #14	SKIC2 (ENSODEG00000017516) #15	NELFE (ENSODEG00000017670) #16	CFB (ENSODEG00000017537) #17	C2 (ENSODEG00000017792) #18	ZBTB12 (ENSODEG00000017709) #19	EHMT2 (ENSODEG00000017547) #20	SLC44A4 (ENSODEG00000017567) #21	NEU1 (ENSODEG00000017719) #22	ENSODEG00000020560	ENSODEG00000020564	HSPA1L (ENSODEG00000020501) #24	LSM2 (ENSODEG00000017583) #25	VARS1 (ENSODEG00000017681) #26	ENSODEG00000017700 #27	SAPCD1 (ENSODEG00000017689) #28	MSH5 (ENSODEG00000017644) #29	ENSODEG00000017682 #30	DDAH2 (ENSODEG00000017617) #31	MPIG6B (ENSODEG00000017842) #32	LY6G6C (ENSODEG00000017694) #33	LY6G6D (ENSODEG00000017755) #34	ENSODEG00000017710 #35	ENSODEG00000017678 ##36
Long-tailed chinchilla	MODERN SPECIES	144	FKBPL (ENSCLAG00000008369)	ATF6B (ENSCLAG00000007441) #9	CYP21A2 (ENSCLAG00000007939) #11	ENSCLAG00000008330 #10	ENSCLAG00000007618	ENSCLAG00000008416 #12	STK19 (ENSCLAG00000007097) #13	DXO (ENSCLAG00000006682) #14	SKIC2 (ENSCLAG00000007678) #15	NELFE (ENSCLAG00000009684) #16	CFB (ENSCLAG00000010397) #17	C2 (ENSCLAG00000007167) #18	ZBTB12 (ENSCLAG00000007108) #19	EHMT2 (ENSCLAG00000009673) #20	SLC44A4 (ENSCLAG00000006728) #21	NEU1 (ENSCLAG00000008497) #22	ENSCLAG00000018000	HSPA1L (ENSCLAG00000007254) #24	LSM2 (ENSCLAG00000008081) #25	VARS1 (ENSCLAG00000009470) #26	VWA7 (ENSCLAG00000007284) #27	SAPCD1 (ENSCLAG00000006758) #28	MSH5 (ENSCLAG00000011345) #29	CLIC1 (ENSCLAG00000008227) #30	MPIG6B (ENSCLAG00000007245) #32	DDAH2 (ENSCLAG00000006559) #31	LY6G6C (ENSCLAG00000009864) #33	ENSCLAG00000009432 #34	ENSCLAG00000008055 #35	ENSCLAG00000011200 ##36	ABHD16A (ENSCLAG00000011581) #37
Naked mole-rat female	MODERN SPECIES	4	AGPAT1 (ENSHGLG00000013956)	EGFL8 (ENSHGLG00000014379)	PPT2 (ENSHGLG00000016656) #7	PRRT1 (ENSHGLG00000016674) #8	FKBPL (ENSHGLG00000033526)	ATF6B (ENSHGLG00000016687) #9	ENSHGLG00000016534 #10	ENSHGLG00000016544 #10	STK19 (ENSHGLG00000016553) #13	DXO (ENSHGLG00000016572) #14	SKIC2 (ENSHGLG00000016596) #15	NELFE (ENSHGLG00000016601) #16	ENSHGLG00000042406 #18	EHMT2 (ENSHGLG00000019509) #20	SLC44A4 (ENSHGLG00000018523) #21	NEU1 (ENSHGLG00000046499) #22	ENSHGLG00000038683	ENSHGLG00000018564	HSPA1L (ENSHGLG00000034751) #24	LSM2 (ENSHGLG00000011299) #25	VWA7 (ENSHGLG00000012234) #27	ENSHGLG00000012415 #28	MSH5 (ENSHGLG00000012630) #29	CLIC1 (ENSHGLG00000012777) #30	DDAH2 (ENSHGLG00000039122) #31	ENSHGLG00000047674	ENSHGLG00000019251 #33	ENSHGLG00000040317 #34	ENSHGLG00000049061 #35	ENSHGLG00000005200	ENSHGLG00000037307
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.i.b #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Marmotini	ANCESTRAL SPECIES	18	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.i.b #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Marmotini_b	ANCESTRAL SPECIES	82	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00860000136229	ENSGT00940000162096 #24	ENSGT00390000016597.i.b #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.b.a ##36
Arctic ground squirrel	MODERN SPECIES	662	PRRT1 (ENSUPAG00010019711) #8	FKBPL (ENSUPAG00010019716)	ATF6B (ENSUPAG00010019718) #9	ENSUPAG00010019727 #10	ENSUPAG00010019731 #10	CYP21A2 (ENSUPAG00010019746) #11	ENSUPAG00010019979 #12	STK19 (ENSUPAG00010019994) #13	DXO (ENSUPAG00010019997) #14	SKIC2 (ENSUPAG00010020008) #15	NELFE (ENSUPAG00010020030) #16	CFB (ENSUPAG00010020047) #17	C2 (ENSUPAG00010020070) #18	ZBTB12 (ENSUPAG00010020115) #19	EHMT2 (ENSUPAG00010020118) #20	NEU1 (ENSUPAG00010020203) #22	ENSUPAG00010020208	ENSUPAG00010020209	HSPA1L (ENSUPAG00010020211) #24	ENSUPAG00010020214 #25	VARS1 (ENSUPAG00010020220) #26	VWA7 (ENSUPAG00010020234) #27	SAPCD1 (ENSUPAG00010020268) #28	MSH5 (ENSUPAG00010020275) #29	CLIC1 (ENSUPAG00010020314) #30	DDAH2 (ENSUPAG00010020318) #31	MPIG6B (ENSUPAG00010020337) #32	LY6G6C (ENSUPAG00010020345) #33	LY6G6D (ENSUPAG00010020352) #34	ENSUPAG00010020357 #35	ENSUPAG00010020367 ##36
Squirrel	MODERN SPECIES	327	PRRT1 (ENSSTOG00000026158) #8	FKBPL (ENSSTOG00000014716)	ATF6B (ENSSTOG00000027684) #9	TNXB (ENSSTOG00000024569) #10	CYP21A2 (ENSSTOG00000014662) #11	ENSSTOG00000014639 #12	STK19 (ENSSTOG00000014629) #13	DXO (ENSSTOG00000027075) #14	SKIC2 (ENSSTOG00000014596) #15	NELFE (ENSSTOG00000027409) #16	CFB (ENSSTOG00000014577) #17	C2 (ENSSTOG00000029554) #18	ZBTB12 (ENSSTOG00000027411) #19	EHMT2 (ENSSTOG00000020917) #20	SLC44A4 (ENSSTOG00000020040) #21	NEU1 (ENSSTOG00000013187) #22	ENSSTOG00000029617	ENSSTOG00000033750	HSPA1L (ENSSTOG00000029893) #24	LSM2 (ENSSTOG00000013144) #25	VARS1 (ENSSTOG00000013112) #26	VWA7 (ENSSTOG00000013089) #27	SAPCD1 (ENSSTOG00000020002) #28	MSH5 (ENSSTOG00000013079) #29	CLIC1 (ENSSTOG00000027220) #30	DDAH2 (ENSSTOG00000020601) #31	MPIG6B (ENSSTOG00000013076) #32	LY6G6C (ENSSTOG00000013066) #33	LY6G6D (ENSSTOG00000031597) #34	ENSSTOG00000020346 #35	ENSSTOG00000013043 ##36
Alpin marmot	MODERN SPECIES	20	PRRT1 (ENSMMMG00000017975) #8	FKBPL (ENSMMMG00000017964)	ATF6B (ENSMMMG00000017915) #9	TNXB (ENSMMMG00000017623) #10	CYP21A2 (ENSMMMG00000017250) #11	ENSMMMG00000017231 #12	STK19 (ENSMMMG00000017217) #13	DXO (ENSMMMG00000017202) #14	SKIC2 (ENSMMMG00000017173) #15	NELFE (ENSMMMG00000017122) #16	CFB (ENSMMMG00000017099) #17	C2 (ENSMMMG00000017046) #18	ZBTB12 (ENSMMMG00000017035) #19	EHMT2 (ENSMMMG00000010523) #20	SLC44A4 (ENSMMMG00000010455) #21	NEU1 (ENSMMMG00000010432) #22	ENSMMMG00000010423	HSPA1L (ENSMMMG00000010419) #24	LSM2 (ENSMMMG00000010414) #25	VARS1 (ENSMMMG00000010374) #26	VWA7 (ENSMMMG00000010320) #27	SAPCD1 (ENSMMMG00000010310) #28	MSH5 (ENSMMMG00000010239) #29	CLIC1 (ENSMMMG00000010225) #30	DDAH2 (ENSMMMG00000010203) #31	MPIG6B (ENSMMMG00000010181) #32	LY6G6C (ENSMMMG00000010168) #33	LY6G6D (ENSMMMG00000010160) #34	ENSMMMG00000010150 #35	ENSMMMG00000010039 ##36	ABHD16A (ENSMMMG00000010000) #37
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005009478	PRRT1 (ENSSVLG00005009624) #8	FKBPL (ENSSVLG00005009660)	ATF6B (ENSSVLG00005009694) #9	ENSSVLG00005009930 #10	ENSSVLG00005010039 #10	CYP21A2 (ENSSVLG00005010144) #11	ENSSVLG00005010830 #12	STK19 (ENSSVLG00005013398) #13	DXO (ENSSVLG00005013565) #14	SKIC2 (ENSSVLG00005013769) #15	NELFE (ENSSVLG00005013975) #16	ZBTB12 (ENSSVLG00005015684) #19	EHMT2 (ENSSVLG00005015794) #20	SLC44A4 (ENSSVLG00005016167) #21	NEU1 (ENSSVLG00005016819) #22	ENSSVLG00005016858	HSPA1L (ENSSVLG00005016879) #24	ENSSVLG00005016911 #25	VARS1 (ENSSVLG00005016986) #26	VWA7 (ENSSVLG00005017120) #27	SAPCD1 (ENSSVLG00005017335) #28	MSH5 (ENSSVLG00005017475) #29	CLIC1 (ENSSVLG00005018219) #30	DDAH2 (ENSSVLG00005018334) #31	MPIG6B (ENSSVLG00005018418) #32	LY6G6C (ENSSVLG00005018810) #33	LY6G6D (ENSSVLG00005018868) #34	ENSSVLG00005018920 #35	ENSSVLG00005019003 ##36	ABHD16A (ENSSVLG00005019075) #37
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.a.a.b #36
Eulipotyphla	ANCESTRAL SPECIES	1166															ENSGT00940000160576 #21	ENSGT00950000182944.D #22
Hedgehog	MODERN SPECIES	8519															SLC44A4 (ENSEEUG00000014909) #21	NEU1 (ENSEEUG00000014875) #22
Common shrew	MODERN SPECIES	7072															SLC44A4 (ENSSARG00000006770) #21	NEU1 (ENSSARG00000006749) #22	ENSSARG00000006697	ENSSARG00000006687
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Suina	ANCESTRAL SPECIES	17	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Pig	MODERN SPECIES	15	PRRT1 (ENSSSCG00000024403) #8	FKBPL (ENSSSCG00000001431)	ATF6B (ENSSSCG00000001430) #9	TNXB (ENSSSCG00000023611) #10	CYP21A2 (ENSSSCG00000001428) #11	C4A (ENSSSCG00000001427) #12	STK19 (ENSSSCG00000001426) #13	DXO (ENSSSCG00000001425) #14	SKIC2 (ENSSSCG00000001424) #15	NELFE (ENSSSCG00000001423) #16	CFB (ENSSSCG00000024914) #17	C2 (ENSSSCG00000001422) #18	ZBTB12 (ENSSSCG00000001421) #19	EHMT2 (ENSSSCG00000001420) #20	SLC44A4 (ENSSSCG00000001419) #21	NEU1 (ENSSSCG00000001418) #22	ENSSSCG00000029160	HSPA1L (ENSSSCG00000030368) #24	LSM2 (ENSSSCG00000039021) #25	VARS1 (ENSSSCG00000038950) #26	VWA7 (ENSSSCG00000036796) #27	SAPCD1 (ENSSSCG00000061053) #28	MSH5 (ENSSSCG00000035596) #29	ENSSSCG00000039071 #30	DDAH2 (ENSSSCG00000038514) #31	MPIG6B (ENSSSCG00000034664) #32	LY6G6C (ENSSSCG00000036566) #33	LY6G6D (ENSSSCG00000060949) #34	ENSSSCG00000040885 #35	LY6G6F (ENSSSCG00000033590) #36	ABHD16A (ENSSSCG00000034923) #37
Chacoan peccary	MODERN SPECIES	782	PRRT1 (ENSCWAG00000018228) #8	FKBPL (ENSCWAG00000018256)	ATF6B (ENSCWAG00000018282) #9	TNXB (ENSCWAG00000018517) #10	CYP21A2 (ENSCWAG00000019083) #11	ENSCWAG00000019207 #12	STK19 (ENSCWAG00000019629) #13	DXO (ENSCWAG00000019694) #14	SKIC2 (ENSCWAG00000019717) #15	NELFE (ENSCWAG00000019802) #16	CFB (ENSCWAG00000019872) #17	C2 (ENSCWAG00000019961) #18	ZBTB12 (ENSCWAG00000020206) #19	EHMT2 (ENSCWAG00000020250) #20	SLC44A4 (ENSCWAG00000020510) #21	NEU1 (ENSCWAG00000020642) #22	ENSCWAG00000020668	HSPA1L (ENSCWAG00000003666) #24	LSM2 (ENSCWAG00000003683) #25	VARS1 (ENSCWAG00000003706) #26	VWA7 (ENSCWAG00000003764) #27	ENSCWAG00000003822	SAPCD1 (ENSCWAG00000003859) #28	MSH5 (ENSCWAG00000003925) #29	CLIC1 (ENSCWAG00000004210) #30	DDAH2 (ENSCWAG00000004235) #31	MPIG6B (ENSCWAG00000004278) #32	LY6G6C (ENSCWAG00000004498) #33	ENSCWAG00000004529	ENSCWAG00000004566 #35	LY6G6F (ENSCWAG00000004637) #36
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000155779.a.b #7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Arabian camel	MODERN SPECIES	12	ENSCDRG00005021283 #8	FKBPL (ENSCDRG00005021280)	ATF6B (ENSCDRG00005021251) #9	ENSCDRG00005021242 #10	ENSCDRG00005021235 #10	CYP21A2 (ENSCDRG00005021227) #11	ENSCDRG00005013954 #12	STK19 (ENSCDRG00005013204) #13	DXO (ENSCDRG00005013148) #14	SKIC2 (ENSCDRG00005012836) #15	NELFE (ENSCDRG00005012632) #16	CFB (ENSCDRG00005012567) #17	C2 (ENSCDRG00005011879) #18	EHMT2 (ENSCDRG00005010474) #20	SLC44A4 (ENSCDRG00005009940) #21	NEU1 (ENSCDRG00005009842) #22	ENSCDRG00005009752	HSPA1L (ENSCDRG00005009726) #24	LSM2 (ENSCDRG00005009650) #25	VARS1 (ENSCDRG00005009449) #26	VWA7 (ENSCDRG00005009323) #27	SAPCD1 (ENSCDRG00005009171) #28	MSH5 (ENSCDRG00005008921) #29	CLIC1 (ENSCDRG00005008844) #30	DDAH2 (ENSCDRG00005020427) #31	MPIG6B (ENSCDRG00005020398) #32	LY6G6C (ENSCDRG00005020392) #33	LY6G6D (ENSCDRG00005020378) #34	ENSCDRG00005020367 #35	LY6G6F (ENSCDRG00005020359) #36	ABHD16A (ENSCDRG00005020342) #37
Alpaca	MODERN SPECIES	2781															ENSVPAG00000008107 #21	NEU1 (ENSVPAG00000008105) #22
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00900000143760	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT01030000235045	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Beluga whale	MODERN SPECIES	79	PPT2 (ENSDLEG00000018277) #7	PRRT1 (ENSDLEG00000018264) #8	FKBPL (ENSDLEG00000018254)	ATF6B (ENSDLEG00000018231) #9	ENSDLEG00000018118 #10	CYP21A2 (ENSDLEG00000018038) #11	ENSDLEG00000017976 #12	STK19 (ENSDLEG00000017929) #13	DXO (ENSDLEG00000017864) #14	SKIV2L (ENSDLEG00000017811) #15	NELFE (ENSDLEG00000017728) #16	CFB (ENSDLEG00000016539) #17	ZBTB12 (ENSDLEG00000016456) #19	EHMT2 (ENSDLEG00000016419) #20	SLC44A4 (ENSDLEG00000016245) #21	NEU1 (ENSDLEG00000016223) #22	ENSDLEG00000016206	HSPA1L (ENSDLEG00000016199) #24	ENSDLEG00000016191 #25	VARS (ENSDLEG00000016141) #26	VWA7 (ENSDLEG00000016096) #27	SAPCD1 (ENSDLEG00000016079) #28	MSH5 (ENSDLEG00000015373) #29	CLIC1 (ENSDLEG00000015325) #30	DDAH2 (ENSDLEG00000015311) #31	MPIG6B (ENSDLEG00000015272) #32	LY6G6C (ENSDLEG00000015263) #33	ENSDLEG00000015256 #35	LY6G6F (ENSDLEG00000015136) #36	ABHD16A (ENSDLEG00000015115) #37	LY6G5B (ENSDLEG00000015077)
Narwhal	MODERN SPECIES	310	ATF6B (ENSMMNG00015014753) #9	ENSMMNG00015014694 #10	ENSMMNG00015014671 #10	CYP21A2 (ENSMMNG00015014640) #11	ENSMMNG00015014625	ENSMMNG00015014582 #12	STK19 (ENSMMNG00015014556) #13	DXO (ENSMMNG00015014547) #14	SKIC2 (ENSMMNG00015014510) #15	NELFE (ENSMMNG00015014463) #16	CFB (ENSMMNG00015014427) #17	C2 (ENSMMNG00015014376) #18	ZBTB12 (ENSMMNG00015014331) #19	EHMT2 (ENSMMNG00015014231) #20	SLC44A4 (ENSMMNG00015014161) #21	NEU1 (ENSMMNG00015014127) #22	HSPA1L (ENSMMNG00015014107) #24	ENSMMNG00015014100 #25	VARS1 (ENSMMNG00015014071) #26	VWA7 (ENSMMNG00015013234) #27	SAPCD1 (ENSMMNG00015013215) #28	MSH5 (ENSMMNG00015013174) #29	CLIC1 (ENSMMNG00015013149) #30	DDAH2 (ENSMMNG00015013128) #31	MPIG6B (ENSMMNG00015013061) #32	LY6G6C (ENSMMNG00015013009) #33	ENSMMNG00015012996 #34	ENSMMNG00015012988 #35	LY6G6F (ENSMMNG00015012977) #36	ABHD16A (ENSMMNG00015012962) #37	LY6G5C (ENSMMNG00015012943)
Vaquita	MODERN SPECIES	2	PRRT1 (ENSPSNG00000016194) #8	FKBPL (ENSPSNG00000016258)	ATF6B (ENSPSNG00000016300) #9	TNXB (ENSPSNG00000016562) #10	CYP21A2 (ENSPSNG00000016707) #11	ENSPSNG00000017716 #12	STK19 (ENSPSNG00000022076) #13	DXO (ENSPSNG00000022097) #14	SKIC2 (ENSPSNG00000022137) #15	NELFE (ENSPSNG00000022223) #16	CFB (ENSPSNG00000022253) #17	C2 (ENSPSNG00000022293) #18	ZBTB12 (ENSPSNG00000022317) #19	EHMT2 (ENSPSNG00000022340) #20	SLC44A4 (ENSPSNG00000022406) #21	NEU1 (ENSPSNG00000022443) #22	ENSPSNG00000022462	HSPA1L (ENSPSNG00000022467) #24	ENSPSNG00000022469 #25	VARS1 (ENSPSNG00000022482) #26	VWA7 (ENSPSNG00000022500) #27	ENSPSNG00000022510	SAPCD1 (ENSPSNG00000022514) #28	MSH5 (ENSPSNG00000022523) #29	DDAH2 (ENSPSNG00000022530) #31	MPIG6B (ENSPSNG00000022539) #32	LY6G6C (ENSPSNG00000022555) #33	ENSPSNG00000022557 #34	ENSPSNG00000022559 #35	LY6G6F (ENSPSNG00000022561) #36	ABHD16A (ENSPSNG00000022566) #37
Dolphin	MODERN SPECIES	2748														EHMT2 (ENSTTRG00000014148) #20	SLC44A4 (ENSTTRG00000014144) #21	NEU1 (ENSTTRG00000014142) #22	ENSTTRG00000014139	ENSTTRG00000014138	HSPA1L (ENSTTRG00000014132) #24	LSM2 (ENSTTRG00000014131) #25	VARS1 (ENSTTRG00000014128) #26	VWA7 (ENSTTRG00000014125) #27	SAPCD1 (ENSTTRG00000014124) #28	MSH5 (ENSTTRG00000014113) #29	CLIC1 (ENSTTRG00000014110) #30	DDAH2 (ENSTTRG00000014108) #31	MPIG6B (ENSTTRG00000014107) #32	LY6G6C (ENSTTRG00000014106) #33	ABHD16A (ENSTTRG00000014105) #37	ENSTTRG00000014104	CSNK2B (ENSTTRG00000014103)
Sperm whale	MODERN SPECIES	9	PRRT1 (ENSPCTG00005006536) #8	ATF6B (ENSPCTG00005006590) #9	ENSPCTG00005006857 #10	ENSPCTG00005006895 #10	CYP21A2 (ENSPCTG00005006933) #11	ENSPCTG00005007209 #12	STK19 (ENSPCTG00005007999) #13	DXO (ENSPCTG00005008018) #14	SKIV2L (ENSPCTG00005008068) #15	NELFE (ENSPCTG00005008264) #16	CFB (ENSPCTG00005008443) #17	C2 (ENSPCTG00005008601) #18	ZBTB12 (ENSPCTG00005008961) #19	EHMT2 (ENSPCTG00005009060) #20	SLC44A4 (ENSPCTG00005010010) #21	NEU1 (ENSPCTG00005010808) #22	ENSPCTG00005010895	ENSPCTG00005010915	HSPA1L (ENSPCTG00005010962) #24	ENSPCTG00005010979 #25	VARS (ENSPCTG00005011043) #26	VWA7 (ENSPCTG00005011234) #27	SAPCD1 (ENSPCTG00005011374) #28	MSH5 (ENSPCTG00005011491) #29	CLIC1 (ENSPCTG00005011586) #30	DDAH2 (ENSPCTG00005011628) #31	MPIG6B (ENSPCTG00005011700) #32	LY6G6C (ENSPCTG00005012139) #33	ENSPCTG00005012184 #34	ENSPCTG00005012276 #35	LY6G6F (ENSPCTG00005012296) #36
Blue whale	MODERN SPECIES	2	FKBPL (ENSBMSG00010022055)	ATF6B (ENSBMSG00010022046) #9	ENSBMSG00010022037 #10	ENSBMSG00010022030 #10	CYP21A2 (ENSBMSG00010022029) #11	ENSBMSG00010019596 #12	STK19 (ENSBMSG00010018908) #13	DXO (ENSBMSG00010018892) #14	SKIC2 (ENSBMSG00010018842) #15	NELFE (ENSBMSG00010018730) #16	CFB (ENSBMSG00010018659) #17	C2 (ENSBMSG00010018380) #18	ZBTB12 (ENSBMSG00010018319) #19	EHMT2 (ENSBMSG00010018022) #20	SLC44A4 (ENSBMSG00010017609) #21	NEU1 (ENSBMSG00010017545) #22	ENSBMSG00010017521	ENSBMSG00010017486	ENSBMSG00010017443	HSPA1L (ENSBMSG00010017435) #24	LSM2 (ENSBMSG00010017420) #25	VARS1 (ENSBMSG00010017361) #26	VWA7 (ENSBMSG00010017271) #27	SAPCD1 (ENSBMSG00010017235) #28	MSH5 (ENSBMSG00010016985) #29	CLIC1 (ENSBMSG00010016956) #30	DDAH2 (ENSBMSG00010016929) #31	MPIG6B (ENSBMSG00010016519) #32	LY6G6C (ENSBMSG00010016444) #33	LY6G6D (ENSBMSG00010016411) #34	ENSBMSG00010016395
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT01010000225285	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Yarkand deer	MODERN SPECIES	30	PPT2 (ENSCHYG00000002395) #7	PRRT1 (ENSCHYG00000002421) #8	FKBPL (ENSCHYG00000002435)	ATF6B (ENSCHYG00000002484) #9	ENSCHYG00000002680 #10	ENSCHYG00000002703 #10	STK19 (ENSCHYG00000002722) #13	DXO (ENSCHYG00000002741) #14	SKIC2 (ENSCHYG00000002793) #15	NELFE (ENSCHYG00000002920) #16	CFB (ENSCHYG00000002990) #17	C2 (ENSCHYG00000003048) #18	ZBTB12 (ENSCHYG00000003144) #19	EHMT2 (ENSCHYG00000003209) #20	SLC44A4 (ENSCHYG00000003430) #21	NEU1 (ENSCHYG00000003513) #22	HSPA1L (ENSCHYG00000003544) #24	LSM2 (ENSCHYG00000003554) #25	VARS1 (ENSCHYG00000003595) #26	VWA7 (ENSCHYG00000003797) #27	SAPCD1 (ENSCHYG00000003856) #28	ENSCHYG00000003888	MSH5 (ENSCHYG00000003905) #29	CLIC1 (ENSCHYG00000003940) #30	DDAH2 (ENSCHYG00000003968) #31	ENSCHYG00000004019 #32	ENSCHYG00000004094 #34	ENSCHYG00000004101 #35	LY6G6F (ENSCHYG00000004155) #36	ABHD16A (ENSCHYG00000004122) #37	LY6G5C (ENSCHYG00000004169)
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00950000185097.b	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT01010000225285	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739.m #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00950000185097.b	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT01010000225285	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.h #11	ENSGT00940000155739.n #12	ENSGT00940000158338.g #11	ENSGT00940000155739.m #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00950000185097.b	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Rambouillet Sheep	MODERN SPECIES	12	ENSOARG00020006932 #10	ENSOARG00020007064 #11	ENSOARG00020007257 #12	ENSOARG00020007482 #12	ENSOARG00020009342 #11	ENSOARG00020009383 #12	STK19 (ENSOARG00020009501) #13	DXO (ENSOARG00020009576) #14	ENSOARG00020009635	NELFE (ENSOARG00020009711) #16	CFB (ENSOARG00020009870) #17	C2 (ENSOARG00020009981) #18	ZBTB12 (ENSOARG00020011099) #19	EHMT2 (ENSOARG00020011157) #20	SLC44A4 (ENSOARG00020011938) #21	NEU1 (ENSOARG00020012464) #22	ENSOARG00020012575	HSPA1A (ENSOARG00020012603)	ENSOARG00020012622	HSPA1L (ENSOARG00020012683) #24	LSM2 (ENSOARG00020012709) #25	VARS1 (ENSOARG00020012761) #26	VWA7 (ENSOARG00020012877) #27	SAPCD1 (ENSOARG00020013063) #28	MSH5 (ENSOARG00020013176) #29	CLIC1 (ENSOARG00020013786) #30	DDAH2 (ENSOARG00020013844) #31	MPIG6B (ENSOARG00020013921) #32	LY6G6C (ENSOARG00020014588) #33	LY6G6D (ENSOARG00020014636) #34	ENSOARG00020014696 #35
Goat	MODERN SPECIES	15	ENSCHIG00000022140 #10	ENSCHIG00000017158 #10	CYP21A1 (ENSCHIG00000010531) #11	ENSCHIG00000022212 #11	ENSCHIG00000023354 #12	ENSCHIG00000021630 #12	STK19 (ENSCHIG00000006985) #13	DXO (ENSCHIG00000024555) #14	SKIC2 (ENSCHIG00000012897) #15	NELFE (ENSCHIG00000013713) #16	CFB (ENSCHIG00000022942) #17	C2 (ENSCHIG00000014396) #18	ZBTB12 (ENSCHIG00000007636) #19	EHMT2 (ENSCHIG00000013309) #20	SLC44A4 (ENSCHIG00000022933) #21	NEU1 (ENSCHIG00000011024) #22	ENSCHIG00000022355	HSPA1L (ENSCHIG00000022996) #24	LSM2 (ENSCHIG00000016153) #25	VARS1 (ENSCHIG00000011008) #26	VWA7 (ENSCHIG00000017352) #27	SAPCD1 (ENSCHIG00000018682) #28	MSH5 (ENSCHIG00000019852) #29	CLIC1 (ENSCHIG00000024330) #30	DDAH2 (ENSCHIG00000026752) #31	MPIG6B (ENSCHIG00000014942) #32	LY6G6C (ENSCHIG00000007675) #33	LY6G6D (ENSCHIG00000011869) #34	ENSCHIG00000015667 #35	LY6G6F (ENSCHIG00000020017) #36	ABHD16A (ENSCHIG00000014665) #37
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739.m #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT01010000225285	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Bos	ANCESTRAL SPECIES	17	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.e #11	ENSGT00940000155739.m.b #12	ENSGT00940000158338.f #11	ENSGT00940000155739.m.a #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Bos_a	ANCESTRAL SPECIES	11	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.e #11	ENSGT00940000155739.m.a #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Domestic yak	MODERN SPECIES	16	PRRT1 (ENSBGRG00000015598) #8	ENSBGRG00000015556 #8	FKBPL (ENSBGRG00000015529)	ATF6B (ENSBGRG00000026072) #9	CYP21A2 (ENSBGRG00000025952) #11	ENSBGRG00000021276 #12	STK19 (ENSBGRG00000021014) #13	DXO (ENSBGRG00000020987) #14	SKIC2 (ENSBGRG00000020707) #15	NELFE (ENSBGRG00000020576) #16	CFB (ENSBGRG00000020465) #17	C2 (ENSBGRG00000019750) #18	ZBTB12 (ENSBGRG00000019708) #19	EHMT2 (ENSBGRG00000018575) #20	SLC44A4 (ENSBGRG00000017713) #21	NEU1 (ENSBGRG00000017601) #22	ENSBGRG00000017349	HSPA1L (ENSBGRG00000017307) #24	ENSBGRG00000017265 #25	VARS1 (ENSBGRG00000017116) #26	VWA7 (ENSBGRG00000016565) #27	ENSBGRG00000016515	SAPCD1 (ENSBGRG00000016355) #28	MSH5 (ENSBGRG00000016250) #29	CLIC1 (ENSBGRG00000016105) #30	DDAH2 (ENSBGRG00000016025) #31	MPIG6B (ENSBGRG00000015302) #32	LY6G6C (ENSBGRG00000015197) #33	LY6G6D (ENSBGRG00000015149) #34	ENSBGRG00000015047 #35	LY6G6F (ENSBGRG00000014933) #36
Wild yak	MODERN SPECIES	2883														EHMT2 (ENSBMUG00000004767) #20	SLC44A4 (ENSBMUG00000004437) #21	NEU1 (ENSBMUG00000004378) #22	ENSBMUG00000004330	ENSBMUG00000004299
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338.e #11	ENSGT00940000155739.m.b #12	ENSGT00940000158338.f #11	ENSGT00940000155739.m.a #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Cow	MODERN SPECIES	15	ATF6B (ENSBTAG00000008794) #9	TNXB (ENSBTAG00000001444) #10	CYP21A2 (ENSBTAG00000047039) #11	ENSBTAG00000006864 #12	CYP21A1P (ENSBTAG00000001443) #11	C4A (ENSBTAG00000037533) #12	STK19 (ENSBTAG00000005589) #13	DXO (ENSBTAG00000005588) #14	SKIC2 (ENSBTAG00000005587) #15	NELFE (ENSBTAG00000007453) #16	CFB (ENSBTAG00000046158) #17	C2 (ENSBTAG00000007450) #18	ZBTB12 (ENSBTAG00000032031) #19	EHMT2 (ENSBTAG00000005676) #20	SLC44A4 (ENSBTAG00000005675) #21	NEU1 (ENSBTAG00000005674) #22	HSPA1A (ENSBTAG00000025441)	HSPA1L (ENSBTAG00000025442) #24	LSM2 (ENSBTAG00000005634) #25	VARS1 (ENSBTAG00000005631) #26	VWA7 (ENSBTAG00000005630) #27	SAPCD1 (ENSBTAG00000039620) #28	MSH5 (ENSBTAG00000019790) #29	CLIC1 (ENSBTAG00000013533) #30	DDAH2 (ENSBTAG00000013530) #31	MPIG6B (ENSBTAG00000013525) #32	LY6G6C (ENSBTAG00000000585) #33	LY6G6D (ENSBTAG00000053561) #34	LY6G6E (ENSBTAG00000000582) #35	LY6G6F (ENSBTAG00000000580) #36	ABHD16A (ENSBTAG00000000578) #37
Hybrid Bos Indicus	MODERN SPECIES	15	ENSBIXG00005021584 #10	CYP21A2 (ENSBIXG00005003635) #11	ENSBIXG00005021336 #12	ENSBIXG00005021205 #12	ENSBIXG00005003217	ENSBIXG00005019660 #12	STK19 (ENSBIXG00005019611) #13	DXO (ENSBIXG00005019570) #14	SKIC2 (ENSBIXG00005019516) #15	NELFE (ENSBIXG00005019408) #16	CFB (ENSBIXG00005003136) #17	C2 (ENSBIXG00005019243) #18	ZBTB12 (ENSBIXG00005019019) #19	EHMT2 (ENSBIXG00005018977) #20	SLC44A4 (ENSBIXG00005018846) #21	NEU1 (ENSBIXG00005018604) #22	ENSBIXG00005018581	ENSBIXG00005006512	HSPA1L (ENSBIXG00005005515) #24	LSM2 (ENSBIXG00005018478) #25	VARS1 (ENSBIXG00005018440) #26	VWA7 (ENSBIXG00005018337) #27	SAPCD1 (ENSBIXG00005018319) #28	MSH5 (ENSBIXG00005018264) #29	CLIC1 (ENSBIXG00005018075) #30	DDAH2 (ENSBIXG00005018047) #31	MPIG6B (ENSBIXG00005018006) #32	LY6G6C (ENSBIXG00005017788) #33	LY6G6F (ENSBIXG00005017752) #36	ENSBIXG00005017698 #35	ABHD16A (ENSBIXG00005017656) #37
American bison	MODERN SPECIES	2855							ENSBBBG00000016686	STK19 (ENSBBBG00000000723) #13	DXO (ENSBBBG00000008507) #14	SKIC2 (ENSBBBG00000016993) #15	CFB (ENSBBBG00000017044) #17	C2 (ENSBBBG00000017192) #18	ZBTB12 (ENSBBBG00000017222) #19	EHMT2 (ENSBBBG00000017444) #20	SLC44A4 (ENSBBBG00000004359) #21	NEU1 (ENSBBBG00000017602) #22	HSPA1L (ENSBBBG00000017626) #24	LSM2 (ENSBBBG00000017635) #25	VARS1 (ENSBBBG00000017661) #26	VWA7 (ENSBBBG00000017695) #27	SAPCD1 (ENSBBBG00000017720) #28	ENSBBBG00000017722	MSH5 (ENSBBBG00000004388) #29	CLIC1 (ENSBBBG00000017854) #30	DDAH2 (ENSBBBG00000017876) #31	MPIG6B (ENSBBBG00000017879) #32	LY6G6C (ENSBBBG00000007580) #33	ENSBBBG00000017895 #34	ENSBBBG00000017900 #35	LY6G6F (ENSBBBG00000017908) #36	ABHD16A (ENSBBBG00000017936) #37
Siberian musk deer	MODERN SPECIES	355	FKBPL (ENSMMSG00000009704)	ATF6B (ENSMMSG00000009725) #9	ENSMMSG00000009851 #10	ENSMMSG00000009900 #10	CYP21A2 (ENSMMSG00000009963) #11	ENSMMSG00000010458 #12	STK19 (ENSMMSG00000014515) #13	DXO (ENSMMSG00000014558) #14	SKIC2 (ENSMMSG00000014624) #15	NELFE (ENSMMSG00000014969) #16	CFB (ENSMMSG00000015076) #17	C2 (ENSMMSG00000015140) #18	ZBTB12 (ENSMMSG00000015434) #19	EHMT2 (ENSMMSG00000015492) #20	SLC44A4 (ENSMMSG00000015784) #21	NEU1 (ENSMMSG00000015841) #22	ENSMMSG00000015888	ENSMMSG00000015911	ENSMMSG00000015929	HSPA1L (ENSMMSG00000015950) #24	ENSMMSG00000015966 #25	VARS1 (ENSMMSG00000016074) #26	VWA7 (ENSMMSG00000016221) #27	SAPCD1 (ENSMMSG00000016304) #28	MSH5 (ENSMMSG00000016363) #29	CLIC1 (ENSMMSG00000016415) #30	DDAH2 (ENSMMSG00000016445) #31	ENSMMSG00000016480 #32	LY6G6C (ENSMMSG00000016576) #33	ENSMMSG00000016617 #34	ENSMMSG00000016665 #35
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Ursidae	ANCESTRAL SPECIES	37	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769.b #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Ursus	ANCESTRAL SPECIES	97	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769.b #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
American black bear	MODERN SPECIES	3723				ENSUAMG00000022491 #10	CYP21A2 (ENSUAMG00000022492) #11	ENSUAMG00000022519 #12	STK19 (ENSUAMG00000024334) #13	DXO (ENSUAMG00000024335) #14	SKIC2 (ENSUAMG00000024336) #15	NELFE (ENSUAMG00000024338) #16	CFB (ENSUAMG00000024339) #17	C2 (ENSUAMG00000024346) #18	ZBTB12 (ENSUAMG00000024479) #19	EHMT2 (ENSUAMG00000024480) #20	SLC44A4 (ENSUAMG00000024481) #21	NEU1 (ENSUAMG00000024482) #22	ENSUAMG00000024486
Polar bear	MODERN SPECIES	469	PPT2 (ENSUMAG00000010142) #7	ENSUMAG00000010154 #8	FKBPL (ENSUMAG00000010157)	ATF6B (ENSUMAG00000010185) #9	TNXB (ENSUMAG00000010555) #10	CYP21A2 (ENSUMAG00000010639) #11	ENSUMAG00000010912 #12	STK19 (ENSUMAG00000012636) #13	DXO (ENSUMAG00000012641) #14	SKIC2 (ENSUMAG00000012666) #15	NELFE (ENSUMAG00000012674) #16	CFB (ENSUMAG00000012679) #17	C2 (ENSUMAG00000012708) #18	EHMT2 (ENSUMAG00000012898) #20	SLC44A4 (ENSUMAG00000013388) #21	NEU1 (ENSUMAG00000013402) #22	ENSUMAG00000013416	ENSUMAG00000013422	HSPA1L (ENSUMAG00000013424) #24	LSM2 (ENSUMAG00000013425) #25	VARS1 (ENSUMAG00000013486) #26	ENSUMAG00000014071	MSH5 (ENSUMAG00000014085) #29	CLIC1 (ENSUMAG00000014118) #30	DDAH2 (ENSUMAG00000014121) #31	MPIG6B (ENSUMAG00000014122) #32	LY6G6C (ENSUMAG00000014123) #33	LY6G6D (ENSUMAG00000014128) #34	LY6G6F (ENSUMAG00000014129) #36	ENSUMAG00000014132 #35	ENSUMAG00000014133
Giant Panda	MODERN SPECIES	15	FKBPL (ENSAMEG00000019442)	ATF6B (ENSAMEG00000002381) #9	ENSAMEG00000025736 #10	ENSAMEG00000002331 #10	CYP21A2 (ENSAMEG00000002318) #11	ENSAMEG00000002178 #12	STK19 (ENSAMEG00000002170) #13	DXO (ENSAMEG00000002151) #14	SKIC2 (ENSAMEG00000002078) #15	NELFE (ENSAMEG00000002062) #16	CFB (ENSAMEG00000001937) #17	C2 (ENSAMEG00000025602) #18	ZBTB12 (ENSAMEG00000012921) #19	EHMT2 (ENSAMEG00000012927) #20	SLC44A4 (ENSAMEG00000012956) #21	NEU1 (ENSAMEG00000013036) #22	ENSAMEG00000018827	HSPA1L (ENSAMEG00000018815) #24	LSM2 (ENSAMEG00000006483) #25	VARS1 (ENSAMEG00000006417) #26	VWA7 (ENSAMEG00000006372) #27	SAPCD1 (ENSAMEG00000006366) #28	MSH5 (ENSAMEG00000009116) #29	CLIC1 (ENSAMEG00000009132) #30	DDAH2 (ENSAMEG00000009165) #31	MPIG6B (ENSAMEG00000009186) #32	LY6G6C (ENSAMEG00000009191) #33	LY6G6D (ENSAMEG00000026669) #34	ENSAMEG00000027940 #35	LY6G6F (ENSAMEG00000023986) #36	ABHD16A (ENSAMEG00000009210) #37
Mustelinae	ANCESTRAL SPECIES	96	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
American mink	MODERN SPECIES	437	PRRT1 (ENSNVIG00000010048) #8	FKBPL (ENSNVIG00000010056)	ATF6B (ENSNVIG00000010066) #9	ENSNVIG00000010183 #10	ENSNVIG00000010239 #10	CYP21A2 (ENSNVIG00000010270) #11	ENSNVIG00000010426 #12	STK19 (ENSNVIG00000013399) #13	DXO (ENSNVIG00000013450) #14	SKIC2 (ENSNVIG00000013478) #15	NELFE (ENSNVIG00000013531) #16	CFB (ENSNVIG00000013549) #17	C2 (ENSNVIG00000013576) #18	EHMT2 (ENSNVIG00000013727) #20	SLC44A4 (ENSNVIG00000015028) #21	NEU1 (ENSNVIG00000015220) #22	HSPA1L (ENSNVIG00000015272) #24	VARS1 (ENSNVIG00000015283) #26	VWA7 (ENSNVIG00000015362) #27	SAPCD1 (ENSNVIG00000015392) #28	MSH5 (ENSNVIG00000015410) #29	CLIC1 (ENSNVIG00000015586) #30	DDAH2 (ENSNVIG00000015606) #31	MPIG6B (ENSNVIG00000015644) #32	LY6G6C (ENSNVIG00000015725) #33	LY6G6D (ENSNVIG00000015745) #34	ENSNVIG00000015755 #35	LY6G6F (ENSNVIG00000015765) #36	ABHD16A (ENSNVIG00000015779) #37	LY6G5C (ENSNVIG00000015806)	LY6G5B (ENSNVIG00000015818)
Ferret	MODERN SPECIES	536	AGPAT1 (ENSMPUG00000010227)	EGFL8 (ENSMPUG00000010273)	PPT2 (ENSMPUG00000010278) #7	PRRT1 (ENSMPUG00000010287) #8	FKBPL (ENSMPUG00000018356)	ATF6B (ENSMPUG00000010305) #9	TNXB (ENSMPUG00000010312) #10	ENSMPUG00000010539 #12	DXO (ENSMPUG00000010562) #14	SKIC2 (ENSMPUG00000010567) #15	NELFE (ENSMPUG00000010581) #16	CFB (ENSMPUG00000010632) #17	ZBTB12 (ENSMPUG00000018357) #19	EHMT2 (ENSMPUG00000010764) #20	SLC44A4 (ENSMPUG00000010774) #21	NEU1 (ENSMPUG00000010780) #22	ENSMPUG00000010814	HSPA1L (ENSMPUG00000018358) #24	ENSMPUG00000010816 #25	VARS1 (ENSMPUG00000010821) #26	VWA7 (ENSMPUG00000010944) #27	SAPCD1 (ENSMPUG00000010984) #28	MSH5 (ENSMPUG00000010999) #29	CLIC1 (ENSMPUG00000011018) #30	DDAH2 (ENSMPUG00000011029) #31	MPIG6B (ENSMPUG00000011087) #32	LY6G6C (ENSMPUG00000011101) #33	ENSMPUG00000011107 #35	LY6G6F (ENSMPUG00000011112) #36	ABHD16A (ENSMPUG00000011116) #37	LY6G5C (ENSMPUG00000011124)
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576.b #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.nb.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576.b #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708.nb.a.a #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Dingo	MODERN SPECIES	276	FKBPL (ENSCAFG00020001130)	ATF6B (ENSCAFG00020001119) #9	ENSCAFG00020001086 #10	ENSCAFG00020001047 #10	CYP21A2 (ENSCAFG00020000996) #11	ENSCAFG00020000974 #12	STK19 (ENSCAFG00020000957) #13	DXO (ENSCAFG00020000953) #14	SKIC2 (ENSCAFG00020000948) #15	NELFE (ENSCAFG00020000938) #16	CFB (ENSCAFG00020000930) #17	C2 (ENSCAFG00020000917) #18	ZBTB12 (ENSCAFG00020000911) #19	EHMT2 (ENSCAFG00020000444) #20	SLC44A4 (ENSCAFG00020000124) #21	NEU1 (ENSCAFG00020000108) #22	ENSCAFG00020020814	HSPA1L (ENSCAFG00020020809) #24	VARS1 (ENSCAFG00020020790) #26	VWA7 (ENSCAFG00020020763) #27	SAPCD1 (ENSCAFG00020020757) #28	MSH5 (ENSCAFG00020020751) #29	ENSCAFG00020020747 #30	DDAH2 (ENSCAFG00020020742) #31	MPIG6B (ENSCAFG00020020738) #32	LY6G6C (ENSCAFG00020020734) #33	LY6G6D (ENSCAFG00020020731) #34	ENSCAFG00020020728 #35	LY6G6F (ENSCAFG00020020724) #36	ABHD16A (ENSCAFG00020020720) #37	LY6G5C (ENSCAFG00020020715)
Dog	MODERN SPECIES	3	EGFL8 (ENSCAFG00845014787)	PPT2 (ENSCAFG00845014727) #7	PRRT1 (ENSCAFG00845014684) #8	FKBPL (ENSCAFG00845014657)	ATF6B (ENSCAFG00845014557) #9	ENSCAFG00845014483 #10	CYP21A2 (ENSCAFG00845014419) #11	DXO (ENSCAFG00845014369) #14	ENSCAFG00845014055 #12	NELFE (ENSCAFG00845013870) #16	CFB (ENSCAFG00845013817) #17	C2 (ENSCAFG00845013566) #18	ZBTB12 (ENSCAFG00845013446) #19	EHMT2 (ENSCAFG00845013373) #20	SLC44A4 (ENSCAFG00845013098) #21	NEU1 (ENSCAFG00845013021) #22	ENSCAFG00845012990	HSP70 (ENSCAFG00845012950)	HSPA1L (ENSCAFG00845012910) #24	LSM2 (ENSCAFG00845012870) #25	VARS1 (ENSCAFG00845012704) #26	ENSCAFG00845012611	VWA7 (ENSCAFG00845012577) #27	SAPCD1 (ENSCAFG00845012501) #28	MSH5 (ENSCAFG00845012274) #29	CLIC1 (ENSCAFG00845012196) #30	DDAH2 (ENSCAFG00845012152) #31	MPIG6B (ENSCAFG00845011979) #32	LY6G6C (ENSCAFG00845011914) #33	LY6G6D (ENSCAFG00845011897) #34	ENSCAFG00845011862 #35
Red fox	MODERN SPECIES	6	FKBPL (ENSVVUG00000024934)	ATF6B (ENSVVUG00000024847) #9	ENSVVUG00000024842 #10	ENSVVUG00000024838 #10	CYP21A2 (ENSVVUG00000024834) #11	ENSVVUG00000023467 #12	STK19 (ENSVVUG00000023292) #13	DXO (ENSVVUG00000023270) #14	SKIC2 (ENSVVUG00000022807) #15	NELFE (ENSVVUG00000022803) #16	CFB (ENSVVUG00000022795) #17	C2 (ENSVVUG00000022558) #18	ZBTB12 (ENSVVUG00000022537) #19	EHMT2 (ENSVVUG00000022521) #20	ENSVVUG00000022262 #21	NEU1 (ENSVVUG00000022244) #22	ENSVVUG00000022233	ENSVVUG00000022230	VARS (ENSVVUG00000021323) #26	VWA7 (ENSVVUG00000021192) #27	SAPCD1 (ENSVVUG00000021171) #28	MSH5 (ENSVVUG00000021091) #29	CLIC1 (ENSVVUG00000021081) #30	DDAH2 (ENSVVUG00000021073) #31	MPIG6B (ENSVVUG00000021067) #32	LY6G6C (ENSVVUG00000021063) #33	LY6G6D (ENSVVUG00000021061) #34	ENSVVUG00000021057 #35	LY6G6F (ENSVVUG00000021054) #36	ABHD16A (ENSVVUG00000020926) #37	LY6G5C (ENSVVUG00000020920)
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Panthera_a	ANCESTRAL SPECIES	49	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
lion	MODERN SPECIES	86					CYP21A2 (ENSPLOG00000021913) #11	ENSPLOG00000021976 #12	STK19 (ENSPLOG00000005871) #13	DXO (ENSPLOG00000005918) #14	SKIC2 (ENSPLOG00000005988) #15	NELFE (ENSPLOG00000006142) #16	CFB (ENSPLOG00000006217) #17	C2 (ENSPLOG00000006345) #18	ZBTB12 (ENSPLOG00000006567) #19	EHMT2 (ENSPLOG00000006669) #20	SLC44A4 (ENSPLOG00000007011) #21	NEU1 (ENSPLOG00000007193) #22	ENSPLOG00000007223	HSPA1L (ENSPLOG00000007243) #24	ENSPLOG00000007252 #25	VARS1 (ENSPLOG00000007286) #26	VWA7 (ENSPLOG00000007320) #27	SAPCD1 (ENSPLOG00000007372) #28	MSH5 (ENSPLOG00000007434) #29	CLIC1 (ENSPLOG00000007652) #30	DDAH2 (ENSPLOG00000007667) #31	MPIG6B (ENSPLOG00000007706) #32	LY6G6C (ENSPLOG00000007760) #33	LY6G6D (ENSPLOG00000007782) #34	ENSPLOG00000007823 #35	LY6G6F (ENSPLOG00000007854) #36	ABHD16A (ENSPLOG00000007886) #37
leopard	MODERN SPECIES	243	FKBPL (ENSPPRG00000022079)	ATF6B (ENSPPRG00000010646) #9	ENSPPRG00000010387 #10	ENSPPRG00000010194 #10	CYP21A1 (ENSPPRG00000009928) #11	ENSPPRG00000009491 #12	STK19 (ENSPPRG00000006513) #13	DXO (ENSPPRG00000005199) #14	SKIC2 (ENSPPRG00000005017) #15	NELFE (ENSPPRG00000004421) #16	CFB (ENSPPRG00000003761) #17	C2 (ENSPPRG00000002766) #18	ZBTB12 (ENSPPRG00000000449) #19	EHMT2 (ENSPPRG00000022615) #20	SLC44A4 (ENSPPRG00000024415) #21	NEU1 (ENSPPRG00000016768) #22	ENSPPRG00000021548	ENSPPRG00000016028	HSPA1L (ENSPPRG00000021499) #24	LSM2 (ENSPPRG00000015353) #25	VARS1 (ENSPPRG00000014855) #26	VWA7 (ENSPPRG00000013957) #27	SAPCD1 (ENSPPRG00000012516) #28	MSH5 (ENSPPRG00000010980) #29	ENSPPRG00000008716 #30	DDAH2 (ENSPPRG00000008197) #31	MPIG6B (ENSPPRG00000007507) #32	LY6G6C (ENSPPRG00000006955) #33	LY6G6D (ENSPPRG00000006927) #34	ENSPPRG00000006828 #35	LY6G6F (ENSPPRG00000006686) #36
Tiger	MODERN SPECIES	592				ENSPTIG00000014932 #10	CYP21A1 (ENSPTIG00000015168) #11	ENSPTIG00000015384	STK19 (ENSPTIG00000021459) #13	DXO (ENSPTIG00000021529) #14	SKIC2 (ENSPTIG00000021656) #15	NELFE (ENSPTIG00000003753) #16	CFB (ENSPTIG00000005658) #17	C2 (ENSPTIG00000006203) #18	ZBTB12 (ENSPTIG00000009624) #19	EHMT2 (ENSPTIG00000007133) #20	SLC44A4 (ENSPTIG00000008418) #21	NEU1 (ENSPTIG00000009705) #22	ENSPTIG00000009681	HSPA1L (ENSPTIG00000009701) #24	LSM2 (ENSPTIG00000010303) #25	VARS1 (ENSPTIG00000010462) #26	VWA7 (ENSPTIG00000011365) #27	SAPCD1 (ENSPTIG00000011539) #28	MSH5 (ENSPTIG00000011792) #29	CLIC1 (ENSPTIG00000012802) #30	DDAH2 (ENSPTIG00000013344) #31	MPIG6B (ENSPTIG00000013479) #32	LY6G6C (ENSPTIG00000013535) #33	LY6G6D (ENSPTIG00000013643) #34	ENSPTIG00000013669 #35	LY6G6F (ENSPTIG00000013713) #36	ABHD16A (ENSPTIG00000013746) #37
Cat	MODERN SPECIES	236	EGFL8 (ENSFCAG00000022700)	PPT2 (ENSFCAG00000004526) #7	PRRT1 (ENSFCAG00000042315) #8	FKBPL (ENSFCAG00000004524)	ATF6B (ENSFCAG00000018408) #9	ENSFCAG00000033978 #10	CYP21A2 (ENSFCAG00000004522) #11	ENSFCAG00000018602 #12	DXO (ENSFCAG00000004520) #14	SKIC2 (ENSFCAG00000004519) #15	NELFE (ENSFCAG00000004518) #16	CFB (ENSFCAG00000004517) #17	C2 (ENSFCAG00000038245) #18	ZBTB12 (ENSFCAG00000031296) #19	EHMT2 (ENSFCAG00000004515) #20	NEU1 (ENSFCAG00000024446) #22	ENSFCAG00000043383	HSPA1L (ENSFCAG00000004376) #24	LSM2 (ENSFCAG00000045887) #25	VARS1 (ENSFCAG00000004510) #26	VWA7 (ENSFCAG00000004509) #27	SAPCD1 (ENSFCAG00000025141) #28	MSH5 (ENSFCAG00000004508) #29	CLIC1 (ENSFCAG00000019049) #30	DDAH2 (ENSFCAG00000023516) #31	MPIG6B (ENSFCAG00000004507) #32	LY6G6C (ENSFCAG00000022395) #33	LY6G6D (ENSFCAG00000039838) #34	ENSFCAG00000031846 #35	LY6G6F (ENSFCAG00000007643) #36	ABHD16A (ENSFCAG00000004504) #37
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT01090000263312	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Equus	ANCESTRAL SPECIES	10	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT01090000263312	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36
Donkey	MODERN SPECIES	28	PRRT1 (ENSEASG00005014340) #8	FKBPL (ENSEASG00005014344)	ATF6B (ENSEASG00005014347) #9	TNXB (ENSEASG00005014360) #10	CYP21A2 (ENSEASG00005031351) #11	ENSEASG00005014465 #12	STK19 (ENSEASG00005015524) #13	DXO (ENSEASG00005015528) #14	SKIC2 (ENSEASG00005015534) #15	NELFE (ENSEASG00005015538) #16	CFB (ENSEASG00005015549) #17	C2 (ENSEASG00005015602) #18	ZBTB12 (ENSEASG00005015654) #19	EHMT2 (ENSEASG00005015655) #20	SLC44A4 (ENSEASG00005015659) #21	NEU1 (ENSEASG00005015661) #22	ENSEASG00005033759	ENSEASG00005031687	HSPA1L (ENSEASG00005015667) #24	ENSEASG00005029150 #25	VARS1 (ENSEASG00005015673) #26	SAPCD1 (ENSEASG00005035061) #28	VWA7 (ENSEASG00005015684) #27	MSH5 (ENSEASG00005015720) #29	CLIC1 (ENSEASG00005015748) #30	DDAH2 (ENSEASG00005015752) #31	MPIG6B (ENSEASG00005015758) #32	ENSEASG00005032389 #33	ENSEASG00005037844 #35	ENSEASG00005015762 #34	LY6G6F (ENSEASG00005015764) #36
Chiroptera	ANCESTRAL SPECIES	20	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Megabat	MODERN SPECIES	3236	ENSPVAG00000005146	FKBPL (ENSPVAG00000005145)	ATF6B (ENSPVAG00000005144) #9	TNXB (ENSPVAG00000005141) #10	CYP21A2 (ENSPVAG00000005140) #11	ENSPVAG00000005139 #12	STK19 (ENSPVAG00000005138) #13	DXO (ENSPVAG00000005137) #14	SKIC2 (ENSPVAG00000005136) #15	NELFE (ENSPVAG00000005135) #16	CFB (ENSPVAG00000005133) #17	C2 (ENSPVAG00000005131) #18	ZBTB12 (ENSPVAG00000005130) #19	EHMT2 (ENSPVAG00000005128) #20	SLC44A4 (ENSPVAG00000005126) #21	NEU1 (ENSPVAG00000005125) #22	ENSPVAG00000005124
Microchiroptera	ANCESTRAL SPECIES	21	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000007175 #35	ENSGT00390000015960.a.a.b #36	ENSGT00940000160908 #37
Greater horseshoe bat	MODERN SPECIES	21	PPT2 (ENSRFEG00010004670) #7	PRRT1 (ENSRFEG00010004649) #8	FKBPL (ENSRFEG00010004642)	ATF6B (ENSRFEG00010004612) #9	TNXB (ENSRFEG00010004576) #10	CYP21A2 (ENSRFEG00010004504) #11	ENSRFEG00010003936 #12	STK19 (ENSRFEG00010003603) #13	DXO (ENSRFEG00010003576) #14	SKIC2 (ENSRFEG00010003408) #15	NELFE (ENSRFEG00010003277) #16	C2 (ENSRFEG00010003161) #18	ZBTB12 (ENSRFEG00010003090) #19	EHMT2 (ENSRFEG00010002923) #20	SLC44A4 (ENSRFEG00010002777) #21	NEU1 (ENSRFEG00010002744) #22	ENSRFEG00010002706	HSPA1L (ENSRFEG00010002696) #24	LSM2 (ENSRFEG00010002680) #25	VARS1 (ENSRFEG00010002616) #26	VWA7 (ENSRFEG00010002527) #27	ENSRFEG00010002482 #28	MSH5 (ENSRFEG00010002383) #29	ENSRFEG00010002328 #30	DDAH2 (ENSRFEG00010002300) #31	MPIG6B (ENSRFEG00010002226) #32	LY6G6C (ENSRFEG00010002168) #33	LY6G6D (ENSRFEG00010002149) #34	ENSRFEG00010002132	LY6G6F (ENSRFEG00010002110) #36	ABHD16A (ENSRFEG00010002067) #37
Microbat	MODERN SPECIES	1516														ENSMLUG00000004908 #20	SLC44A4 (ENSMLUG00000004887) #21	NEU1 (ENSMLUG00000004882) #22	ENSMLUG00000013589	ENSMLUG00000004876	HSPA1L (ENSMLUG00000013157) #24	VARS1 (ENSMLUG00000013126) #26	VWA7 (ENSMLUG00000013115) #27	MSH5 (ENSMLUG00000013103) #29	CLIC1 (ENSMLUG00000029014) #30	DDAH2 (ENSMLUG00000009494) #31	MPIG6B (ENSMLUG00000009481) #32	LY6G6C (ENSMLUG00000009471) #33	LY6G6F (ENSMLUG00000009461) #36	ENSMLUG00000022636 #35	ABHD16A (ENSMLUG00000009427) #37	LY6G5C (ENSMLUG00000026524)	LY6G5B (ENSMLUG00000026027)
Atlantogenata	ANCESTRAL SPECIES	71	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000007175 #35	ENSGT00390000015960.a.a #36	ENSGT00940000160908 #37
Xenarthra	ANCESTRAL SPECIES	153	ENSGT00390000014107.a.b	ENSGT00390000008726.h.b	ENSGT00940000155779.a.b #7	ENSGT00940000160798 #9	ENSGT00940000162382 #8	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000162096 #24	ENSGT00390000016597 #25
Sloth	MODERN SPECIES	11968																NEU1 (ENSCHOG00000009912) #22
Armadillo	MODERN SPECIES	910	RNF5 (ENSDNOG00000033018)	AGPAT1 (ENSDNOG00000031697)	ENSDNOG00000024209 #7	ATF6B (ENSDNOG00000042135) #9	PRRT1 (ENSDNOG00000039982) #8	TNXB (ENSDNOG00000044250) #10	CYP21A2 (ENSDNOG00000043254) #11	ENSDNOG00000048858 #12	STK19 (ENSDNOG00000036273) #13	DXO (ENSDNOG00000038155) #14	SKIC2 (ENSDNOG00000037590) #15	ENSDNOG00000041886 #16	ENSDNOG00000042923 #17	EHMT2 (ENSDNOG00000045233) #20	SLC44A4 (ENSDNOG00000037836) #21	NEU1 (ENSDNOG00000043068) #22	HSPA1L (ENSDNOG00000002634) #24	LSM2 (ENSDNOG00000002633) #25
Afrotheria	ANCESTRAL SPECIES	128	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516
Afrotheria_a	ANCESTRAL SPECIES	78	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00500000046149	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215	ENSGT00390000006516	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00500000045192 #28	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000007175 #35	ENSGT00390000015960.a.a #36	ENSGT00940000160908 #37
Elephant	MODERN SPECIES	89	PRRT1 (ENSLAFG00000029048) #8	FKBPL (ENSLAFG00000014296)	ATF6B (ENSLAFG00000020739) #9	TNXB (ENSLAFG00000014268) #10	CYP21A2 (ENSLAFG00000029194) #11	ENSLAFG00000014252 #12	STK19 (ENSLAFG00000014246) #13	DXO (ENSLAFG00000014243) #14	SKIC2 (ENSLAFG00000014231) #15	NELFE (ENSLAFG00000028155) #16	CFB (ENSLAFG00000014225) #17	C2 (ENSLAFG00000014221) #18	ZBTB12 (ENSLAFG00000008173) #19	EHMT2 (ENSLAFG00000008169) #20	SLC44A4 (ENSLAFG00000008164) #21	NEU1 (ENSLAFG00000022690) #22	ENSLAFG00000025973	ENSLAFG00000031724	ENSLAFG00000029077	HSPA1L (ENSLAFG00000032136) #24	ENSLAFG00000028019	LSM2 (ENSLAFG00000016139) #25	VARS1 (ENSLAFG00000023090) #26	VWA7 (ENSLAFG00000016131) #27	SAPCD1 (ENSLAFG00000020972) #28	MSH5 (ENSLAFG00000016118) #29	CLIC1 (ENSLAFG00000021620) #30	DDAH2 (ENSLAFG00000026302) #31	MPIG6B (ENSLAFG00000027847) #32	LY6G6F (ENSLAFG00000005926) #36	ENSLAFG00000005927 #35
Hyrax	MODERN SPECIES	7122														EHMT2 (ENSPCAG00000000623) #20	SLC44A4 (ENSPCAG00000000558) #21	NEU1 (ENSPCAG00000000539) #22
Tenrec	MODERN SPECIES	9017												CFB (ENSETEG00000020244) #17	C2 (ENSETEG00000020242) #18	ENSETEG00000020238 #20	SLC44A4 (ENSETEG00000020235) #21	NEU1 (ENSETEG00000020232) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.l	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.b ##36	ENSGT00940000160908 #37	ENSGT00390000003781.e.b.w.a	ENSGT00390000003292
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.l	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.b ##36	ENSGT00940000160908 #37	ENSGT00390000003781.e.b.x	ENSGT00390000003781.e.b.w.b.b
Diprotodontia	ANCESTRAL SPECIES	42	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.l	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00550000074977 #29	ENSGT00940000154708 #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.b ##36	ENSGT00940000160908 #37	ENSGT00390000003781.e.b.w.b.b	ENSGT00390000003292
Diprotodontia_a	ANCESTRAL SPECIES	41	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT00940000158338 #11	ENSGT00940000155739 #12	ENSGT00390000018295 #13	ENSGT00390000006425 #14	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605.fb #17	ENSGT00940000162934 #18	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00950000182944.D #22	ENSGT00940000161215.l	ENSGT00940000162096 #24	ENSGT00390000016597 #25	ENSGT00940000157775 #26	ENSGT00390000011517.a.b #27	ENSGT00550000074977 #29	ENSGT00940000154708.rb #30	ENSGT00940000154708.sb #30	ENSGT00940000160769 #31	ENSGT00390000017793 #32	ENSGT00390000000752 #33	ENSGT00390000015960.a.b.b #34	ENSGT00390000015960.b ##36	ENSGT00940000160908 #37	ENSGT00520000060793
koala	MODERN SPECIES	254	PRRT1 (ENSPCIG00000033881) #8	FKBPL (ENSPCIG00000023355)	ATF6B (ENSPCIG00000023354) #9	ENSPCIG00000033698 #10	ENSPCIG00000034697 #10	CYP21A2 (ENSPCIG00000018796) #11	ENSPCIG00000018795 #12	STK19 (ENSPCIG00000018794) #13	DXO (ENSPCIG00000018793) #14	SKIC2 (ENSPCIG00000018792) #15	NELFE (ENSPCIG00000018791) #16	CFB (ENSPCIG00000018602) #17	C2 (ENSPCIG00000018577) #18	EHMT2 (ENSPCIG00000018573) #20	SLC44A4 (ENSPCIG00000018569) #21	NEU1 (ENSPCIG00000018566) #22	ENSPCIG00000036093	HSPA1L (ENSPCIG00000034441) #24	LSM2 (ENSPCIG00000018560) #25	VARS1 (ENSPCIG00000018553) #26	ENSPCIG00000031031 #27	MSH5 (ENSPCIG00000018524) #29	ENSPCIG00000018521 #30	DDAH2 (ENSPCIG00000018519) #31	ENSPCIG00000018517 #32	ENSPCIG00000018515 #33	ENSPCIG00000018513 ##36	ABHD16A (ENSPCIG00000018508) #37	ENSPCIG00000018510	ENSPCIG00000018506	GPANK1 (ENSPCIG00000018505)
Common wonbat	MODERN SPECIES	1047	PRRT1 (ENSVURG00010005333) #8	FKBPL (ENSVURG00010005327)	ATF6B (ENSVURG00010005308) #9	TNXB (ENSVURG00010005278) #10	CYP21A2 (ENSVURG00010004106) #11	ENSVURG00010004026 #12	ENSVURG00010004005 #13	DXO (ENSVURG00010003977) #14	SKIC2 (ENSVURG00010003919) #15	NELFE (ENSVURG00010003903) #16	CFB (ENSVURG00010003888) #17	C2 (ENSVURG00010003113) #18	ZBTB12 (ENSVURG00010003061) #19	ENSVURG00010003006 #20	ENSVURG00010002979 #21	ENSVURG00010002968 #22	LSM2 (ENSVURG00010002932) #25	VARS1 (ENSVURG00010002891) #26	VWA7 (ENSVURG00010002783) #27	MSH5 (ENSVURG00010002604) #29	ENSVURG00010002558 #30	DDAH2 (ENSVURG00010002525) #31	ENSVURG00010002510 #32	LY6G6C (ENSVURG00010002498) #33	ENSVURG00010002491 #34	ENSVURG00010002484 ##36	ABHD16A (ENSVURG00010002450) #37	ENSVURG00010002442	ENSVURG00010002434	ENSVURG00010002399	GPANK1 (ENSVURG00010002391)
Wallaby	MODERN SPECIES	10073														EHMT2 (ENSMEUG00000003673) #20	SLC44A4 (ENSMEUG00000003657) #21	NEU1 (ENSMEUG00000003645) #22
Tasmanian devil	MODERN SPECIES	3	EGFL8 (ENSSHAG00000010328)	PPT2 (ENSSHAG00000010290) #7	ENSSHAG00000024676 #8	FKBPL (ENSSHAG00000021705)	ATF6B (ENSSHAG00000010010) #9	TNXB (ENSSHAG00000009524) #10	CYP21A2 (ENSSHAG00000009476) #11	SKIC2 (ENSSHAG00000008963) #15	ENSSHAG00000009118 #12	DXO (ENSSHAG00000009052) #14	NELFE (ENSSHAG00000030731) #16	CFB (ENSSHAG00000008733) #17	C2 (ENSSHAG00000020551) #18	EHMT2 (ENSSHAG00000008173) #20	SLC44A4 (ENSSHAG00000008048) #21	ENSSHAG00000031809 #22	ENSSHAG00000022826 #24	ENSSHAG00000027136 #24	LSM2 (ENSSHAG00000023089) #25	VARS1 (ENSSHAG00000006937) #26	VWA7 (ENSSHAG00000024459) #27	MSH5 (ENSSHAG00000006612) #29	DDAH2 (ENSSHAG00000006438) #31	ENSSHAG00000006406 #32	ABHD16A (ENSSHAG00000002668) #37	CSNK2B (ENSSHAG00000001478)	BAG6 (ENSSHAG00000005423)	ENSSHAG00000027915	PRRC2A (ENSSHAG00000005204)	ENSSHAG00000020492	LTB (ENSSHAG00000004144)
Platypus	MODERN SPECIES	88	PPT2 (ENSOANG00000038201) #7	PRRT1 (ENSOANG00000042428) #8	FKBPL (ENSOANG00000036168)	ATF6B (ENSOANG00000043339) #9	ENSOANG00000014402 #10	ENSOANG00000000594 #10	CYP21A2 (ENSOANG00000000301) #11	ENSOANG00000043996 #12	STK19 (ENSOANG00000041085) #13	DXO (ENSOANG00000045425) #14	SKIC2 (ENSOANG00000043811) #15	NELFE (ENSOANG00000043127) #16	C2 (ENSOANG00000015604) #18	EHMT2 (ENSOANG00000045934) #20	SLC44A4 (ENSOANG00000043990) #21	NEU1 (ENSOANG00000050558) #22	ENSOANG00000005396 #24	ENSOANG00000039824 #24	ENSOANG00000005398 #25	VARS1 (ENSOANG00000005400) #26	VWA7 (ENSOANG00000004090) #27	MSH5 (ENSOANG00000004089) #29	CLIC1 (ENSOANG00000051271) #30	DDAH2 (ENSOANG00000048277) #31	ENSOANG00000048506 #33	ENSOANG00000002164 #36	ABHD16A (ENSOANG00000012820) #37	ENSOANG00000047546	GPANK1 (ENSOANG00000043588)	ENSOANG00000046320	BAG6 (ENSOANG00000030898)
Sauria	ANCESTRAL SPECIES	37	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00940000161757	ENSGT00940000154370	ENSGT00560000077232.A	ENSGT00390000003213	ENSGT00940000159733	ENSGT00390000014159	ENSGT00940000159890	ENSGT00940000158668.d.a.a.a	ENSGT00940000158605.eb.b ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.b.b	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b
Lepidosauria	ANCESTRAL SPECIES	93	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00980000198705	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.fb #17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b
Episquamata	ANCESTRAL SPECIES	27	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00980000198705	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.eb.a ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b
Toxicofera	ANCESTRAL SPECIES	38	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00980000198705	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.eb.a ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00390000011517.b ##27	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b
Elapidae	ANCESTRAL SPECIES	36	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.eb.a ##17	ENSGT00940000158605.eb.b ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00390000011517.b ##27	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b
Elapidae_a	ANCESTRAL SPECIES	96	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.eb.a ##17	ENSGT00940000158605.eb.b ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b	ENSGT00940000155534.u.b.a
Acanthophiinae	ANCESTRAL SPECIES	88	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.eb.a ##17	ENSGT00940000158605.eb.b ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b	ENSGT00940000155534.u.b.a
Eastern brown snake	MODERN SPECIES	131	ENSPTXG00000011850	ATF6B (ENSPTXG00000011849) #9	FKBPL (ENSPTXG00000011847)	PRRT1 (ENSPTXG00000011846) #8	ENSPTXG00000011845	PPT2 (ENSPTXG00000011843) #7	SLC44A4 (ENSPTXG00000011842) #21	EHMT2 (ENSPTXG00000011483) #20	ZBTB12 (ENSPTXG00000011467) #19	ENSPTXG00000011465 #18	ENSPTXG00000017693 ##17	NELFE (ENSPTXG00000017691) #16	SKIC2 (ENSPTXG00000017627) #15	DXO (ENSPTXG00000017615) #14	STK19 (ENSPTXG00000017614) #13	NEU1 (ENSPTXG00000017613) #22	ATP6V1G2 (ENSPTXG00000017612)	DDX39B (ENSPTXG00000017610)	ENSPTXG00000017609	APOM (ENSPTXG00000017608)	BAG6 (ENSPTXG00000017606)	AIF1 (ENSPTXG00000017604)	ENSPTXG00000017602	ENSPTXG00000017601	TNF (ENSPTXG00000017600)	NFKBIL1 (ENSPTXG00000017598)	GPANK1 (ENSPTXG00000017595)	CSNK2B (ENSPTXG00000017593)	ENSPTXG00000017592	ENSPTXG00000017565	ENSPTXG00000017562
Mainland tiger snake	MODERN SPECIES	311										ENSNSUG00000010314 ##17	ENSNSUG00000010271 ##17	NELFE (ENSNSUG00000010270) #16	SKIC2 (ENSNSUG00000009635) #15	DXO (ENSNSUG00000009634) #14	STK19 (ENSNSUG00000009633) #13	NEU1 (ENSNSUG00000009632) #22	ATP6V1G2 (ENSNSUG00000009631)	DDX39B (ENSNSUG00000009628)	ENSNSUG00000009627	APOM (ENSNSUG00000009626)	BAG6 (ENSNSUG00000009625)	PRRC2A (ENSNSUG00000009039)	AIF1 (ENSNSUG00000009037)
Blue-lipped sea krait	MODERN SPECIES	9207															STK19 (ENSLLTG00000015058) #13	NEU1 (ENSLLTG00000015051) #22
Indian cobra	MODERN SPECIES	1	ATF6B (ENSNNAG00000001480) #9	FKBPL (ENSNNAG00000001501)	PRRT1 (ENSNNAG00000001512) #8	ENSNNAG00000001525	PPT2 (ENSNNAG00000001552) #7	SLC44A4 (ENSNNAG00000001625) #21	EHMT2 (ENSNNAG00000001744) #20	ZBTB12 (ENSNNAG00000001795) #19	C2 (ENSNNAG00000001866) #18	ENSNNAG00000002061 ##17	ENSNNAG00000002171 ##17	NELFE (ENSNNAG00000002190) #16	SKIC2 (ENSNNAG00000002208) #15	DXO (ENSNNAG00000002235) #14	STK19 (ENSNNAG00000002241) #13	NEU1 (ENSNNAG00000002262) #22	ATP6V1G2 (ENSNNAG00000002325)	DDX39B (ENSNNAG00000002340)	ENSNNAG00000002353	APOM (ENSNNAG00000002361)	BAG6 (ENSNNAG00000002441)	ENSNNAG00000002777	ENSNNAG00000002793	AIF1 (ENSNNAG00000002799)	ENSNNAG00000002804 ##27	ENSNNAG00000002810	TNF (ENSNNAG00000002818)	ENSNNAG00000002822	ENSNNAG00000002827	NFKBIL1 (ENSNNAG00000002834)	GPANK1 (ENSNNAG00000002843)
Lizard	MODERN SPECIES	1	PRRT1 (ENSACAG00000010578) #8	ENSACAG00000010586	ENSACAG00000036289	ENSACAG00000010659 #7	ENSACAG00000033306	SLC44A4 (ENSACAG00000010687) #21	EHMT2 (ENSACAG00000010883) #20	ENSACAG00000038954	ZBTB12 (ENSACAG00000011189) #19	ENSACAG00000011208 ##17	ENSACAG00000039069 ##17	NELFE (ENSACAG00000011678) #16	SKIC2 (ENSACAG00000011746) #15	DXO (ENSACAG00000012071) #14	STK19 (ENSACAG00000012116) #13	ENSACAG00000012147 #22	ENSACAG00000012213	ENSACAG00000016372	ENSACAG00000012240	ENSACAG00000038743	APOM (ENSACAG00000012357)	ENSACAG00000012381	ENSACAG00000016031	ENSACAG00000043555	ENSACAG00000037150	ENSACAG00000042411	ENSACAG00000013747	ENSACAG00000038202	ENSACAG00000024467	ENSACAG00000007401	ENSACAG00000040969
Laterata	ANCESTRAL SPECIES	53	ENSGT00940000160798 #9	ENSGT00920000149187	ENSGT00940000162382 #8	ENSGT01060000248556.A.a.a.b	ENSGT00940000155779.a.b #7	ENSGT00980000198705	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00940000158605.eb.a ##17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380	ENSGT00940000154416.C.c.b	ENSGT01060000248544.a.b.a	ENSGT00940000173002	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b
Argentine black and white tegu	MODERN SPECIES	83	ATF6B (ENSSMRG00000016651) #9	FKBPL (ENSSMRG00000016650)	PRRT1 (ENSSMRG00000016649) #8	ENSSMRG00000016647	PPT2 (ENSSMRG00000016645) #7	ENSSMRG00000016644	SLC44A4 (ENSSMRG00000016643) #21	EHMT2 (ENSSMRG00000016642) #20	ZBTB12 (ENSSMRG00000016641) #19	C2 (ENSSMRG00000016640) #18	CFB (ENSSMRG00000016639) ##17	NELFE (ENSSMRG00000016638) #16	SKIC2 (ENSSMRG00000016208) #15	DXO (ENSSMRG00000016191) #14	STK19 (ENSSMRG00000016189) #13	NEU1 (ENSSMRG00000016188) #22	ATP6V1G2 (ENSSMRG00000016187)	DDX39B (ENSSMRG00000016183)	ENSSMRG00000016182	APOM (ENSSMRG00000016181)	BAG6 (ENSSMRG00000016179)	PRRC2A (ENSSMRG00000016176)	AIF1 (ENSSMRG00000016174)	ENSSMRG00000016172	ENSSMRG00000016170	ENSSMRG00000016166	ENSSMRG00000016164	ENSSMRG00000016162	TNF (ENSSMRG00000016159)	ENSSMRG00000016150	ENSSMRG00000016149
tuatara	MODERN SPECIES	1414										ENSSPUG00000012532	AIF1 (ENSSPUG00000012565)	ENSSPUG00000012649	BAG6 (ENSSPUG00000012706)	ENSSPUG00000012775	STK19 (ENSSPUG00000012782) #13	NEU1 (ENSSPUG00000012787) #22	ATP6V1G2 (ENSSPUG00000012795)	DDX39B (ENSSPUG00000012805)	DXO (ENSSPUG00000012861) #14	SKIC2 (ENSSPUG00000012945) #15	NELFE (ENSSPUG00000012971) #16	ENSSPUG00000012983 #17	C2 (ENSSPUG00000013008) #18	ZBTB12 (ENSSPUG00000013016) #19	EHMT2 (ENSSPUG00000013030) #20	SLC44A4 (ENSSPUG00000013135) #21	PPT2 (ENSSPUG00000013194) #7	ENSSPUG00000013297	PRRT1 (ENSSPUG00000013311) #8	ATF6B (ENSSPUG00000013318) #9	ENSSPUG00000013341
Archelosauria	ANCESTRAL SPECIES	56						ENSGT00390000014159	ENSGT00940000159890	ENSGT00940000158668.d.a.a.a	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00940000162934 #18	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.b.b	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b	ENSGT00940000155534.u.b
Cryptodira	ANCESTRAL SPECIES	80											ENSGT00940000158605.fb #17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.b.b	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b	ENSGT00940000155534.u.b
Testudinoidea	ANCESTRAL SPECIES	63											ENSGT00940000158605.fb #17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380.e	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.b.b	ENSGT00390000013929	ENSGT00390000003292	ENSGT00390000003781.e.b	ENSGT00940000155534.u.b
Emydidae	ANCESTRAL SPECIES	167											ENSGT00940000158605.fb #17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22
painted turtle	MODERN SPECIES	1138											CFB (ENSCPBG00000000208) #17	NELFE (ENSCPBG00000000225) #16	SKIC2 (ENSCPBG00000000343) #15	DXO (ENSCPBG00000001233) #14	STK19 (ENSCPBG00000001249) #13	NEU1 (ENSCPBG00000001280) #22	ENSCPBG00000001366	EHMT2 (ENSCPBG00000001809) #20	ZBTB12 (ENSCPBG00000012202) #19	C2 (ENSCPBG00000012206) #18	AGPAT1 (ENSCPBG00000012213)	ENSCPBG00000012216	ENSCPBG00000012224	ENSCPBG00000012226	ENSCPBG00000012227	ENSCPBG00000012229 #9	FKBPL (ENSCPBG00000012233)	PRRT1 (ENSCPBG00000012234) #8	ENSCPBG00000012236	PPT2 (ENSCPBG00000012239) #7	SLC44A4 (ENSCPBG00000012245) #21
Three-toed box turtle	MODERN SPECIES	225														C2 (ENSTMTG00000013693) #18	ENSTMTG00000015166 #17	NEU1 (ENSTMTG00000015175) #22
Testudinidae	ANCESTRAL SPECIES	80											ENSGT00940000158605.fb #17	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000160110	ENSGT01000000215801	ENSGT00390000001026	ENSGT00390000016199	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00950000185380.e	ENSGT01100000263475.d.a.e.a.a.a.a.a	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.b.b	ENSGT00390000013929	ENSGT01100000263475.d.a.e.b	ENSGT00950000185045	ENSGT00390000003292	ENSGT00390000003781.e.b
Abingdon island giant tortoise	MODERN SPECIES	94											C2 (ENSCABG00000023021) #18	NELFE (ENSCABG00000023022) #16	SKIC2 (ENSCABG00000023023) #15	DXO (ENSCABG00000023024) #14	STK19 (ENSCABG00000023025) #13	NEU1 (ENSCABG00000023026) #22	DDX39B (ENSCABG00000023027)	ENSCABG00000023028	APOM (ENSCABG00000023029)	BAG6 (ENSCABG00000023030)	ENSCABG00000023031	ENSCABG00000023032	AIF1 (ENSCABG00000023033)
Archosauria	ANCESTRAL SPECIES																	ENSGT00950000182944.D #22
Aves	ANCESTRAL SPECIES																	ENSGT00950000182944.D #22
Neognathae	ANCESTRAL SPECIES																	ENSGT00950000182944.D #22
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00950000182944.D #22
Neognathae_c	ANCESTRAL SPECIES																	ENSGT00950000182944.D #22
Kakapo	MODERN SPECIES	60	KCNN3 (ENSSHBG00005016916)	ADAR (ENSSHBG00005016925)	CHRNB2 (ENSSHBG00005016930)	UBE2Q1 (ENSSHBG00005016943)	SHE (ENSSHBG00005016951)	IL6R (ENSSHBG00005016959)	ATP8B2 (ENSSHBG00005017006)	AQP10 (ENSSHBG00005017184)	HAX1 (ENSSHBG00005017197)	UBAP2L (ENSSHBG00005017214)	TPM3 (ENSSHBG00005017226)	C1orf43 (ENSSHBG00005017235)	ENSSHBG00005017239	ENSSHBG00005017244	ENSSHBG00005017250	NEU1 (ENSSHBG00005017256) #22	ENSSHBG00005017259 #11	ENSSHBG00005017261	ENSSHBG00005017264	RAB13 (ENSSHBG00005017268)	RPS27 (ENSSHBG00005017273)	JTB (ENSSHBG00005017276)	CREB3L4 (ENSSHBG00005017279)	SLC39A1 (ENSSHBG00005017282)	ENSSHBG00005017285	INTS3 (ENSSHBG00005017291)	ENSSHBG00005017317	ILF2 (ENSSHBG00005017322)	ENSSHBG00005017325	ENSSHBG00005017328	CHTOP (ENSSHBG00005017334)
Anura	ANCESTRAL SPECIES	33	ENSGT00390000003781.f	ENSGT00390000003292	ENSGT01010000230144	ENSGT00390000013929	ENSGT01060000248544.a.b.b	ENSGT01060000248544.a.b.a	ENSGT01060000248544.a.a.a.b	ENSGT00940000154416.C.c.b	ENSGT00950000183161.a.a	ENSGT00390000016199	ENSGT00390000001026	ENSGT01000000215801	ENSGT00940000160110	ENSGT00390000006425 #14	ENSGT00390000018295 #13	ENSGT00950000182944.D #22	ENSGT00940000161280	ENSGT00940000158255 #15	ENSGT00630000089917 #16	ENSGT00940000158605 #17	ENSGT00940000162418 #19	ENSGT00940000159459 #20	ENSGT00940000160576 #21	ENSGT00980000198705	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000162382 #8	ENSGT00920000149187	ENSGT00940000160798 #9	ENSGT00940000155565 #10	ENSGT01100000263514.B
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000009783	NFKBIL1 (ENSLLEG00000009825)	ENSLLEG00000009863	ENSLLEG00000009884	TNF (ENSLLEG00000009912)	LTB (ENSLLEG00000009952)	ENSLLEG00000010004	ENSLLEG00000010106	BAG6 (ENSLLEG00000010208)	ENSLLEG00000011366	APOM (ENSLLEG00000011393)	ENSLLEG00000011489	ENSLLEG00000011536	DXO (ENSLLEG00000011604) #14	STK19 (ENSLLEG00000011665) #13	NEU1 (ENSLLEG00000011733) #22	ENSLLEG00000011856	ENSLLEG00000011936	ENSLLEG00000012307	ENSLLEG00000012340	GPR101 (ENSLLEG00000012390)	ENSLLEG00000012485	ENSLLEG00000012854	ARHGEF6 (ENSLLEG00000013180)	CD40LG (ENSLLEG00000013408)	ENSLLEG00000013485	VGLL1 (ENSLLEG00000013527)	HTATSF1 (ENSLLEG00000013582)	BRS3 (ENSLLEG00000013646)	ENSLLEG00000013680	MAP7D3 (ENSLLEG00000013700)
Frog	MODERN SPECIES	8	gpank1 (ENSXETG00000002509)	ENSXETG00000047292	nfkbil1 (ENSXETG00000038829)	ENSXETG00000042568	lta (ENSXETG00000030256)	tnf (ENSXETG00000002505)	ltb (ENSXETG00000002504)	ENSXETG00000048888	rgs3 (ENSXETG00000037672)	bag6 (ENSXETG00000002500)	apom (ENSXETG00000002499)	ENSXETG00000040898	ddx39b (ENSXETG00000002498)	dxo (ENSXETG00000027585) #14	stk19 (ENSXETG00000002497) #13	neu1 (ENSXETG00000002496) #22	prrc2a (ENSXETG00000002501)	cfb (ENSXETG00000039379) #17	skiv2l (ENSXETG00000010932) #15	nelfe (ENSXETG00000010931) #16	c2 (ENSXETG00000041348) #17	zbtb12 (ENSXETG00000037011) #19	ehmt2 (ENSXETG00000010928) #20	slc44a4 (ENSXETG00000010924) #21	ENSXETG00000040050	ppt2 (ENSXETG00000027741) #7	crat (ENSXETG00000005161)	prrt1 (ENSXETG00000005163)	FKBPL (ENSXETG00000038567)	ENSXETG00000045986	atf6b (ENSXETG00000005164) #9
Coelacanth	MODERN SPECIES	3461															ENSLACG00000003478 #17	NEU1 (ENSLACG00000003256) #22	ATP6V1G2 (ENSLACG00000002881)	DDX39B (ENSLACG00000002110)
Actinopterygii	ANCESTRAL SPECIES	1195															ENSGT00940000163299.B.a.b	ENSGT00950000182944.D #22
Neopterygii	ANCESTRAL SPECIES	982															ENSGT00940000163299.B.a.b	ENSGT00950000182944.D #22
Osteoglossocephalai	ANCESTRAL SPECIES	68	ENSGT00940000155565.b #10	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000165771	ENSGT01100000263531.A	ENSGT01060000248670	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000013846.a.b	ENSGT00390000003781.e.a	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146
Osteoglossiformes	ANCESTRAL SPECIES	9	ENSGT00940000155565.b #10	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000165771	ENSGT01100000263531.A	ENSGT01060000248670	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559.i	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00970000193610	ENSGT00390000001153	ENSGT00940000159890	ENSGT00530000063632.B.a
Asian bonytongue	MODERN SPECIES	15	ENSSFOG00015018269 #10	psmb10 (ENSSFOG00015018237)	selenoh (ENSSFOG00015018225)	ENSSFOG00015018219	ENSSFOG00015017767	ENSSFOG00015017462	RNF5 (ENSSFOG00015027460)	slc44a4 (ENSSFOG00015017173) #21	ENSSFOG00015017352	ehmt2 (ENSSFOG00015017107) #20	zbtb12.2 (ENSSFOG00015025199) #19	nelfe (ENSSFOG00015017039) #16	skic2 (ENSSFOG00015016930) #15	ENSSFOG00015028528	ENSSFOG00015016863	neu1 (ENSSFOG00015033143) #22	prrc2a (ENSSFOG00015029587)	csnk2b (ENSSFOG00015016772)	ENSSFOG00015028966	ENSSFOG00015031470	clic1 (ENSSFOG00015029114) #30	ENSSFOG00015028945	ddah2 (ENSSFOG00015016687) #31	rps5 (ENSSFOG00015027542)	ppt2b (ENSSFOG00015016412) #7	cratb (ENSSFOG00015016342)	ENSSFOG00015027042	nrm (ENSSFOG00015030283)	ENSSFOG00015016234	ppp1r11 (ENSSFOG00015025626)	vars2 (ENSSFOG00015016187)
P. kingsleyae	MODERN SPECIES	95	psmb10 (ENSPKIG00000012420)	selenoh (ENSPKIG00000012401)	ENSPKIG00000012376	ENSPKIG00000012320	ENSPKIG00000012271	ENSPKIG00000012260	RNF5 (ENSPKIG00000012249)	ENSPKIG00000012242	slc44a4 (ENSPKIG00000012220) #21	ehmt2 (ENSPKIG00000012135) #20	zbtb12.2 (ENSPKIG00000012101) #19	nelfe (ENSPKIG00000012048) #16	skic2 (ENSPKIG00000011876) #15	ENSPKIG00000011821	ENSPKIG00000011803	neu1 (ENSPKIG00000011781) #22	prrc2a (ENSPKIG00000011749)	csnk2b (ENSPKIG00000011726)	ENSPKIG00000011715	clic1 (ENSPKIG00000011700) #30	ENSPKIG00000011689	ddah2 (ENSPKIG00000011667) #31	rps5 (ENSPKIG00000011575)	ppt2b (ENSPKIG00000011551) #7	cratb (ENSPKIG00000011512)	ENSPKIG00000011475	nrm (ENSPKIG00000011453)	ENSPKIG00000011425	ppp1r11 (ENSPKIG00000011408)	vars2 (ENSPKIG00000011372)	mgat1b (ENSPKIG00000011357)
Clupeocephala	ANCESTRAL SPECIES	52	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000165771	ENSGT00980000199469	ENSGT01100000263531.A	ENSGT01060000248670	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Euteleosteomorpha	ANCESTRAL SPECIES	40	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT01030000235077	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Acanthomorphata	ANCESTRAL SPECIES	22	ENSGT00940000155321.d.a	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00940000155321.d.a	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Pinecone sodierfish	MODERN SPECIES	2	EXT1 (ENSMMDG00005001513)	med30 (ENSMMDG00005001535)	SLC30A8 (ENSMMDG00005001667)	ENSMMDG00005001672	rad21b (ENSMMDG00005001684)	utp23 (ENSMMDG00005001701)	RNF5 (ENSMMDG00005001708)	slc44a4 (ENSMMDG00005001814) #21	ENSMMDG00005004559	ehmt2 (ENSMMDG00005004595) #20	zbtb12.2 (ENSMMDG00005004964) #19	nelfe (ENSMMDG00005004973) #16	skic2 (ENSMMDG00005005055) #15	ENSMMDG00005005742 #8	ENSMMDG00005005750	neu1 (ENSMMDG00005005763) #22	ENSMMDG00005005769	prrc2a (ENSMMDG00005005775)	ENSMMDG00005005795	ENSMMDG00005005820	ENSMMDG00005005825	ENSMMDG00005005830	clic1 (ENSMMDG00005005840) #30	ENSMMDG00005005854	ddah2 (ENSMMDG00005005858) #31	rps5 (ENSMMDG00005005866)	ppt2b (ENSMMDG00005005981) #7	cratb (ENSMMDG00005006077)	ENSMMDG00005007924	nrm (ENSMMDG00005007925)	CDCP1 (ENSMMDG00005007928)
Percomorphaceae	ANCESTRAL SPECIES	10	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Tiger tail seahorse	MODERN SPECIES	179	med30 (ENSHCOG00000006939)	SLC30A8 (ENSHCOG00000006950)	ENSHCOG00000006963	ENSHCOG00000006987	utp23 (ENSHCOG00000007006)	RNF5 (ENSHCOG00000007019)	ENSHCOG00000007038	slc44a4 (ENSHCOG00000007053) #21	ENSHCOG00000007078 #20	ENSHCOG00000007099 #20	zbtb12.2 (ENSHCOG00000007111) #19	nelfe (ENSHCOG00000007147) #16	skic2 (ENSHCOG00000007191) #15	ENSHCOG00000007215	ENSHCOG00000000682	neu1 (ENSHCOG00000007293) #22	prrc2a (ENSHCOG00000007310)	CSNK2B (ENSHCOG00000007326)	ENSHCOG00000007335	ENSHCOG00000000245	ENSHCOG00000007358	clic1 (ENSHCOG00000007366) #30	ENSHCOG00000007376	ddah2 (ENSHCOG00000000246) #31	rps5 (ENSHCOG00000007396)	ppt2b (ENSHCOG00000007558) #7	cratb (ENSHCOG00000007632)	ENSHCOG00000007697	nrm (ENSHCOG00000007705)	ENSHCOG00000007738	CLEC3B (ENSHCOG00000007744)
Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144740	ENSGT00910000144759	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Atherinomorphae	ANCESTRAL SPECIES	12	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Oryzias	ANCESTRAL SPECIES	24	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a.d	ENSGT00910000144759.b	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Oryzias_a	ANCESTRAL SPECIES	42	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a.d	ENSGT00910000144759.b.b	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Chinese medaka	MODERN SPECIES	47	EXT1 (ENSOSIG00000000611)	med30 (ENSOSIG00000000651)	ENSOSIG00000000655	SLC30A8 (ENSOSIG00000000659)	ENSOSIG00000000661	utp23 (ENSOSIG00000000663)	RNF5 (ENSOSIG00000000665)	slc44a4 (ENSOSIG00000000737) #21	ENSOSIG00000004241	ehmt2 (ENSOSIG00000004263) #20	zbtb12.2 (ENSOSIG00000004615) #19	nelfe (ENSOSIG00000004620) #16	skic2 (ENSOSIG00000004654) #15	ENSOSIG00000005168	ENSOSIG00000005171	neu1 (ENSOSIG00000005176) #22	prrc2a (ENSOSIG00000005185)	CSNK2B (ENSOSIG00000005192)	ENSOSIG00000005205	ENSOSIG00000005209	ENSOSIG00000005207	ENSOSIG00000005212	ENSOSIG00000005213
Japanese Medaka HdrR	MODERN SPECIES	2	EXT1 (ENSORLG00000001724)	med30 (ENSORLG00000024450)	ENSORLG00000030323	SLC30A8 (ENSORLG00000022852)	ENSORLG00000024759	ENSORLG00000030195	utp23 (ENSORLG00000001784)	RNF5 (ENSORLG00000001805)	slc44a4 (ENSORLG00000001907) #21	ehmt2 (ENSORLG00000001915) #20	zbtb12.2 (ENSORLG00000026037) #19	nelfe (ENSORLG00000001948) #16	skic2 (ENSORLG00000002021) #15	ENSORLG00000002043	ENSORLG00000002034	neu1 (ENSORLG00000002057) #22	prrc2a (ENSORLG00000002072)	CSNK2B (ENSORLG00000002080)	ENSORLG00000029444	ENSORLG00000025577	ENSORLG00000002111	clic1 (ENSORLG00000002139) #30	ENSORLG00000002145	ddah2 (ENSORLG00000002161) #31	rps5 (ENSORLG00000022059)	ppt2b (ENSORLG00000028117) #7	cratb (ENSORLG00000002206)	ENSORLG00000030256	nrm (ENSORLG00000024949)	ENSORLG00000002231	CLEC3B (ENSORLG00000025933)
Oryzias_b	ANCESTRAL SPECIES	31	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a.c	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C
Indian medaka	MODERN SPECIES	29	SAMD12 (ENSOMEG00000008963)	EXT1 (ENSOMEG00000008910)	med30 (ENSOMEG00000008879)	SLC30A8 (ENSOMEG00000008832)	ENSOMEG00000008802	ENSOMEG00000008781	utp23 (ENSOMEG00000008767)	RNF5 (ENSOMEG00000008748)	slc44a4 (ENSOMEG00000008715) #21	ehmt2 (ENSOMEG00000008650) #20	zbtb12.2 (ENSOMEG00000008609) #19	nelfe (ENSOMEG00000008581) #16	skic2 (ENSOMEG00000008531) #15	ENSOMEG00000008454	ENSOMEG00000008437	neu1 (ENSOMEG00000008406) #22	ENSOMEG00000000206	CSNK2B (ENSOMEG00000008361)	ENSOMEG00000008337	clic1 (ENSOMEG00000008328) #30	ENSOMEG00000008312	ddah2 (ENSOMEG00000008293) #31	rps5 (ENSOMEG00000008257)	ppt2b (ENSOMEG00000008207) #7	cratb (ENSOMEG00000008192)	ENSOMEG00000008137	nrm (ENSOMEG00000008103)	ENSOMEG00000008048	CLEC3B (ENSOMEG00000008003)	exosc7 (ENSOMEG00000007979)	zdhhc3b (ENSOMEG00000007926)
Javanese ricefish	MODERN SPECIES	2	ENSOJAG00000002660	ENSOJAG00000002658	ENSOJAG00000002629	ENSOJAG00000002616	SAMD12 (ENSOJAG00000002607)	EXT1 (ENSOJAG00000002579)	med30 (ENSOJAG00000002562)	SLC30A8 (ENSOJAG00000002522)	ENSOJAG00000002506	utp23 (ENSOJAG00000002492)	RNF5 (ENSOJAG00000002479)	zbtb12.2 (ENSOJAG00000001989) #19	nelfe (ENSOJAG00000001968) #16	ENSOJAG00000001782 #8	ENSOJAG00000001773	neu1 (ENSOJAG00000001761) #22	ENSOJAG00000001721	ENSOJAG00000001700	ENSOJAG00000001685	ENSOJAG00000001673	mindy1 (ENSOJAG00000001655)	pi4kb (ENSOJAG00000016681)	ENSOJAG00000016664	psmb4 (ENSOJAG00000016563)	ENSOJAG00000016553	cdc42se1 (ENSOJAG00000016546)	mllt11 (ENSOJAG00000016522)	gabpb2a (ENSOJAG00000016513)	anp32e (ENSOJAG00000016493)	plekho1a (ENSOJAG00000016471)	ENSOJAG00000016462
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Aplocheiloidei	ANCESTRAL SPECIES	9	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C
Turquoise killifish	DUPLICATION
Turquoise killifish	MODERN SPECIES	1628	SAMD12 (ENSNFUG00015019075)	ENSNFUG00015019084	EXT1 (ENSNFUG00015019092)	SLC30A8 (ENSNFUG00015019103)	ENSNFUG00015019111	RAD21B (ENSNFUG00015019116)	UTP23 (ENSNFUG00015019130)	RNF5 (ENSNFUG00015019142)	slc44a4 (ENSNFUG00015019148) #21	ehmt2 (ENSNFUG00015019290) #20	ZBTB12.2 (ENSNFUG00015019411) #19	nelfe (ENSNFUG00015019416) #16	ENSNFUG00015019471	C19H9ORF91 (ENSNFUG00015019477)	neu1 (ENSNFUG00015011419) #22	neu1 (ENSNFUG00015011554) #22	prrc2a (ENSNFUG00015011564)	CSNK2B (ENSNFUG00015011601)	med30 (ENSNFUG00015011634)	ENSNFUG00015011662	ENSNFUG00015011677	ENSNFUG00015011684	ENSNFUG00015011692	ENSNFUG00015011699	ENSNFUG00015011715	CLIC1 (ENSNFUG00015011730) #30	ENSNFUG00015011751	DDAH2 (ENSNFUG00015011760) #31	PPT2 (ENSNFUG00015011780)	ppt2b (ENSNFUG00015011938) #7	cratb (ENSNFUG00015013164)
Turquoise killifish	MODERN SPECIES	1628	ENSNFUG00015019071	SAMD12 (ENSNFUG00015019075)	ENSNFUG00015019084	EXT1 (ENSNFUG00015019092)	SLC30A8 (ENSNFUG00015019103)	ENSNFUG00015019111	RAD21B (ENSNFUG00015019116)	UTP23 (ENSNFUG00015019130)	RNF5 (ENSNFUG00015019142)	slc44a4 (ENSNFUG00015019148) #21	ehmt2 (ENSNFUG00015019290) #20	ZBTB12.2 (ENSNFUG00015019411) #19	nelfe (ENSNFUG00015019416) #16	ENSNFUG00015019471	C19H9ORF91 (ENSNFUG00015019477)	neu1 (ENSNFUG00015011419) #22	neu1 (ENSNFUG00015011554) #22	prrc2a (ENSNFUG00015011564)	CSNK2B (ENSNFUG00015011601)	med30 (ENSNFUG00015011634)	ENSNFUG00015011662	ENSNFUG00015011677	ENSNFUG00015011684	ENSNFUG00015011692	ENSNFUG00015011699	ENSNFUG00015011715	CLIC1 (ENSNFUG00015011730) #30	ENSNFUG00015011751	DDAH2 (ENSNFUG00015011760) #31	PPT2 (ENSNFUG00015011780)	ppt2b (ENSNFUG00015011938) #7
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	2													ENSKMAG00000013259	ENSKMAG00000013240	neu1 (ENSKMAG00000013223) #22	neu1 (ENSKMAG00000013196) #22	prrc2a (ENSKMAG00000013153)	CSNK2B (ENSKMAG00000013109)	ENSKMAG00000013096	clic1 (ENSKMAG00000013078) #30	ENSKMAG00000013066	ddah2 (ENSKMAG00000013029) #31	rps5 (ENSKMAG00000012994)	ppt2b (ENSKMAG00000012970) #7	cratb (ENSKMAG00000012942)	ENSKMAG00000012916	nrm (ENSKMAG00000012900)	ENSKMAG00000012860	CLEC3B (ENSKMAG00000012838)	exosc7 (ENSKMAG00000012799)	zdhhc3b (ENSKMAG00000012772)
Mangrove rivulus	MODERN SPECIES	2														ENSKMAG00000013259	ENSKMAG00000013240	neu1 (ENSKMAG00000013223) #22	neu1 (ENSKMAG00000013196) #22	prrc2a (ENSKMAG00000013153)	CSNK2B (ENSKMAG00000013109)	ENSKMAG00000013096	clic1 (ENSKMAG00000013078) #30	ENSKMAG00000013066	ddah2 (ENSKMAG00000013029) #31	rps5 (ENSKMAG00000012994)	ppt2b (ENSKMAG00000012970) #7	cratb (ENSKMAG00000012942)	ENSKMAG00000012916	nrm (ENSKMAG00000012900)	ENSKMAG00000012860	CLEC3B (ENSKMAG00000012838)	exosc7 (ENSKMAG00000012799)
Cyprinodontoidei	ANCESTRAL SPECIES	11	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
NAME_4	ANCESTRAL SPECIES	61	ENSGT00940000155321.d.a	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Mummichog	MODERN SPECIES	2275	EXT1 (ENSFHEG00000008450)	med30 (ENSFHEG00000008476)	SLC30A8 (ENSFHEG00000008483)	ENSFHEG00000008500	ENSFHEG00000008517	rad21b (ENSFHEG00000008560)	utp23 (ENSFHEG00000008581)	RNF5 (ENSFHEG00000008602)	slc44a4 (ENSFHEG00000008615) #21	ehmt2 (ENSFHEG00000008631) #20	zbtb12.2 (ENSFHEG00000008640) #19	nelfe (ENSFHEG00000008694) #16	skic2 (ENSFHEG00000008853) #15	ENSFHEG00000008879	ENSFHEG00000008939	neu1 (ENSFHEG00000008980) #22	prrc2a (ENSFHEG00000009015)	CSNK2B (ENSFHEG00000009041)	ENSFHEG00000009051	ENSFHEG00000009059	clic1 (ENSFHEG00000009091) #30	ENSFHEG00000009103	ddah2 (ENSFHEG00000009112) #31	rps5 (ENSFHEG00000009134)	ppt2b (ENSFHEG00000009141) #7	cratb (ENSFHEG00000009180)	ENSFHEG00000009367	nrm (ENSFHEG00000009380)	ENSFHEG00000009392	ENSFHEG00000009477	CLEC3B (ENSFHEG00000009483)
Sheepshead minnow	MODERN SPECIES	256	med30 (ENSCVAG00000003245)	SLC30A8 (ENSCVAG00000003234)	ENSCVAG00000003225	ENSCVAG00000003220	rad21b (ENSCVAG00000003212)	utp23 (ENSCVAG00000003180)	RNF5 (ENSCVAG00000003174)	slc44a4 (ENSCVAG00000003161) #21	ehmt2 (ENSCVAG00000003143) #20	zbtb12.2 (ENSCVAG00000003107) #19	ENSCVAG00000003097	nelfe (ENSCVAG00000003087) #16	skic2 (ENSCVAG00000003072) #15	ENSCVAG00000000088	ENSCVAG00000002963	neu1 (ENSCVAG00000002939) #22	prrc2a (ENSCVAG00000002909)	CSNK2B (ENSCVAG00000002879)	ENSCVAG00000002857	ENSCVAG00000002855	ENSCVAG00000023250	ENSCVAG00000023239	clic1 (ENSCVAG00000023214) #30	ENSCVAG00000023184	ddah2 (ENSCVAG00000023176) #31	ENSCVAG00000023171	ppt2b (ENSCVAG00000023095) #7	cratb (ENSCVAG00000023088)	ENSCVAG00000023055	nrm (ENSCVAG00000023039)	ENSCVAG00000023032
Poeciliinae	ANCESTRAL SPECIES	18	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a.i	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Platyfish	MODERN SPECIES	4	EXT1 (ENSXMAG00000014016)	med30 (ENSXMAG00000014029)	SLC30A8 (ENSXMAG00000014032)	ENSXMAG00000026592	rad21b (ENSXMAG00000014043)	utp23 (ENSXMAG00000014058)	RNF5 (ENSXMAG00000014059)	slc44a4 (ENSXMAG00000014065) #21	ENSXMAG00000024488	ehmt2 (ENSXMAG00000008233) #20	zbtb12.2 (ENSXMAG00000021399) #19	nelfe (ENSXMAG00000014078) #16	skic2 (ENSXMAG00000014079) #15	ENSXMAG00000026922	ENSXMAG00000014138	neu1 (ENSXMAG00000027779) #22	prrc2a (ENSXMAG00000014148)	CSNK2B (ENSXMAG00000014152)	ENSXMAG00000025313	ENSXMAG00000020280	ENSXMAG00000014167	clic1 (ENSXMAG00000014171) #30	ENSXMAG00000014182	ddah2 (ENSXMAG00000014183) #31	rps5 (ENSXMAG00000014201)	ppt2b (ENSXMAG00000028693) #7	cratb (ENSXMAG00000014224)	nrm (ENSXMAG00000021945)	ENSXMAG00000014287	CLEC3B (ENSXMAG00000014294)	ENSXMAG00000026906
Poecilia	ANCESTRAL SPECIES	76	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a.i	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Guppy	MODERN SPECIES	441	zbtb22b (ENSPREG00000002563)	SAMD12 (ENSPREG00000002540)	EXT1 (ENSPREG00000002524)	med30 (ENSPREG00000002499)	SLC30A8 (ENSPREG00000002493)	ENSPREG00000002484	utp23 (ENSPREG00000002478)	RNF5 (ENSPREG00000002462)	slc44a4 (ENSPREG00000002439) #21	ehmt2 (ENSPREG00000002408) #20	zbtb12.2 (ENSPREG00000002370) #19	nelfe (ENSPREG00000002338) #16	skic2 (ENSPREG00000002277) #15	ENSPREG00000002261	ENSPREG00000002235	neu1 (ENSPREG00000002210) #22	ENSPREG00000002196	rad21b (ENSPREG00000002127)	CSNK2B (ENSPREG00000002085)	ENSPREG00000002077	ENSPREG00000002058	ENSPREG00000002048	ENSPREG00000002033	ENSPREG00000002012	clic1 (ENSPREG00000001983) #30	ddah2 (ENSPREG00000001955) #31	rps5 (ENSPREG00000001896)	ppt2b (ENSPREG00000001878) #7	cratb (ENSPREG00000001794)	ENSPREG00000001720	nrm (ENSPREG00000001695)
NAME_6	ANCESTRAL SPECIES	173	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a.i	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759.a	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Sailfin molly	MODERN SPECIES	1009				ENSPLAG00000017858	ENSPLAG00000017873	rad21b (ENSPLAG00000017908)	utp23 (ENSPLAG00000017925)	ENSPLAG00000017946	slc44a4 (ENSPLAG00000018097) #21	ehmt2 (ENSPLAG00000018122) #20	zbtb12.2 (ENSPLAG00000018130) #19	nelfe (ENSPLAG00000018174) #16	skic2 (ENSPLAG00000018304) #15	ENSPLAG00000018323	ENSPLAG00000018331	neu1 (ENSPLAG00000018363) #22	prrc2a (ENSPLAG00000018406)	CSNK2B (ENSPLAG00000018430)
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	58																neu1 (ENSPFOG00000010624) #22
Amazon molly	MODERN SPECIES	641					SLC30A8 (ENSPFOG00000003892)	rad21b (ENSPFOG00000003658)	utp23 (ENSPFOG00000003590)	RNF5 (ENSPFOG00000003526)	slc44a4 (ENSPFOG00000003315) #21	ehmt2 (ENSPFOG00000003160) #20	zbtb12.2 (ENSPFOG00000003120) #19	nelfe (ENSPFOG00000003019) #16	skic2 (ENSPFOG00000002424) #15	ENSPFOG00000002388	ENSPFOG00000002303	neu1 (ENSPFOG00000021747) #22	prrc2a (ENSPFOG00000002230)	CSNK2B (ENSPFOG00000002176)	ENSPFOG00000022167	ENSPFOG00000002164	ENSPFOG00000023435	ENSPFOG00000002158	clic1 (ENSPFOG00000002107) #30	ddah2 (ENSPFOG00000002067) #31	rps5 (ENSPFOG00000002010)	ppt2b (ENSPFOG00000001936) #7	cratb (ENSPFOG00000001611)	ENSPFOG00000001457	nrm (ENSPFOG00000001420)	ENSPFOG00000024108	ENSPFOG00000001318
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Pomacentridae	ANCESTRAL SPECIES	7	ENSGT00940000153675.a.a.a.a.a.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00390000013354.b.b	ENSGT01000000214413.b.a.b.a.b	ENSGT01030000234575.c.a.a.b	ENSGT00940000167426.b	ENSGT00940000167426.a	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a.k	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Pomacentridae_A	ANCESTRAL SPECIES	37	ENSGT00950000183052.b.c.b.b.a.a.b.a.b.b.a.a	ENSGT00940000155847.d	ENSGT00940000163996	ENSGT01100000263533.b.a.a.a	ENSGT00950000182774.b.a.b.a.b.a.a.a.b.b.c.a	ENSGT00940000167426.b	ENSGT00940000167426.a	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a.k	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Amphiprion	ANCESTRAL SPECIES	275															ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a.k	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31
Clown anemonefish	MODERN SPECIES	284															ENSAOCG00000024642	neu1 (ENSAOCG00000024640) #22	ENSAOCG00000024639
Orange clownfish	MODERN SPECIES	8	pi4kb (ENSAPEG00000003502)	ENSAPEG00000003575	psmb4 (ENSAPEG00000003592)	PRUNE1 (ENSAPEG00000003632)	ENSAPEG00000003706	ENSAPEG00000003737	GRIK5 (ENSAPEG00000003749)	ENSAPEG00000003845	ENSAPEG00000003885	RING1 (ENSAPEG00000003906)	rps18 (ENSAPEG00000003920)	VPS52 (ENSAPEG00000003975)	ENSAPEG00000004059	ENSAPEG00000004098 #9	ENSAPEG00000004163	neu1 (ENSAPEG00000004181) #22	prrc2a (ENSAPEG00000004231)	CSNK2B (ENSAPEG00000004320)	ENSAPEG00000004344	ENSAPEG00000004363	clic1 (ENSAPEG00000004376) #30	ENSAPEG00000004411	ddah2 (ENSAPEG00000004429) #31	ENSAPEG00000004455	ENSAPEG00000004472	ENSAPEG00000004484	tshz1 (ENSAPEG00000004494)	CSMD3 (ENSAPEG00000004568)	trps1 (ENSAPEG00000004813)	clptm1l (ENSAPEG00000004913)	rplp1 (ENSAPEG00000004985)
Spiny chromis	MODERN SPECIES	1774									ehmt2 (ENSAPOG00000008370) #20	ENSAPOG00000008298 #20	zbtb12.2 (ENSAPOG00000008278) #19	nelfe (ENSAPOG00000008274) #16	skic2 (ENSAPOG00000008257) #15	ENSAPOG00000008234	ENSAPOG00000008207	neu1 (ENSAPOG00000008167) #22
Bicolor damselfish	MODERN SPECIES	983														ENSSPAG00000005237	ENSSPAG00000005224	neu1 (ENSSPAG00000005216) #22	prrc2a (ENSSPAG00000005187)	ENSSPAG00000005170	ENSSPAG00000005153	ENSSPAG00000005142	clic1 (ENSSPAG00000005129) #30	ENSSPAG00000005120	ddah2 (ENSSPAG00000005116) #31	rps5 (ENSSPAG00000005082)	ppt2b (ENSSPAG00000005059) #7	cratb (ENSSPAG00000005009)	ENSSPAG00000004985	nrm (ENSSPAG00000004970)
Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
P. nyererei	MODERN SPECIES	521	EXT1 (ENSPNYG00000017483)	med30 (ENSPNYG00000017531)	SLC30A8 (ENSPNYG00000017553)	ENSPNYG00000017577	ENSPNYG00000017586	rad21b (ENSPNYG00000017598)	utp23 (ENSPNYG00000017636)	RNF5 (ENSPNYG00000017658)	slc44a4 (ENSPNYG00000017693) #21	ehmt2 (ENSPNYG00000017805) #20	zbtb12.2 (ENSPNYG00000017827) #19	nelfe (ENSPNYG00000017837) #16	skic2 (ENSPNYG00000017853) #15	ENSPNYG00000017908 #8	ENSPNYG00000017922	neu1 (ENSPNYG00000017966) #22	neu1 (ENSPNYG00000017972) #22	prrc2a (ENSPNYG00000017989)	CSNK2B (ENSPNYG00000018029)	ENSPNYG00000018050
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C
Eastern happy	MODERN SPECIES	13	daxx (ENSACLG00000006705)	ENSACLG00000006718	ENSACLG00000006721	zbtb22b (ENSACLG00000006727)	kifc1 (ENSACLG00000006737)	znf384a (ENSACLG00000006757)	FLOT1 (ENSACLG00000006791)	ENSACLG00000006812	ENSACLG00000006822	ENSACLG00000006834	zbtb12.2 (ENSACLG00000006841) #19	nelfe (ENSACLG00000006848) #16	skic2 (ENSACLG00000006886) #15	ENSACLG00000006990	ENSACLG00000006998	neu1 (ENSACLG00000007012) #22	neu1 (ENSACLG00000007026) #22	prrc2a (ENSACLG00000007033)	CSNK2B (ENSACLG00000007243)	ENSACLG00000007266	ENSACLG00000007272	ENSACLG00000007289	ddah2 (ENSACLG00000007297) #31	rps5 (ENSACLG00000007312)	ppt2b (ENSACLG00000007344) #7	cratb (ENSACLG00000007360)	nrm (ENSACLG00000007391)	ENSACLG00000007405	CLEC3B (ENSACLG00000007423)	exosc7 (ENSACLG00000007428)	zdhhc3b (ENSACLG00000007462)
Zebra mbuna	MODERN SPECIES	1104	EXT1 (ENSMZEG00005026388)	med30 (ENSMZEG00005026390)	SLC30A8 (ENSMZEG00005026391)	ENSMZEG00005026393	ENSMZEG00005026394	rad21b (ENSMZEG00005026396)	utp23 (ENSMZEG00005026398)	RNF5 (ENSMZEG00005026400)	slc44a4 (ENSMZEG00005026402) #21	ehmt2 (ENSMZEG00005026409) #20	zbtb12.2 (ENSMZEG00005026411) #19	nelfe (ENSMZEG00005026412) #16	skic2 (ENSMZEG00005026415) #15	ENSMZEG00005026421	ENSMZEG00005026422	neu1 (ENSMZEG00005026424) #22	neu1 (ENSMZEG00005026425) #22	prrc2a (ENSMZEG00005026426)	CSNK2B (ENSMZEG00005026427)	ENSMZEG00005026428	ENSMZEG00005026429	clic1 (ENSMZEG00005026431) #30	ENSMZEG00005026432	ddah2 (ENSMZEG00005026433) #31	rps5 (ENSMZEG00005026435)	ppt2b (ENSMZEG00005026441) #7	cratb (ENSMZEG00005026443)	nrm (ENSMZEG00005026446)	ENSMZEG00005026450	CLEC3B (ENSMZEG00005026453)	exosc7 (ENSMZEG00005026454)
Burton s mouthbrooder	MODERN SPECIES	470	EXT1 (ENSHBUG00000023186)	med30 (ENSHBUG00000023252)	SLC30A8 (ENSHBUG00000023276)	ENSHBUG00000023296	ENSHBUG00000023305	rad21b (ENSHBUG00000023358)	utp23 (ENSHBUG00000023376)	RNF5 (ENSHBUG00000023420)	slc44a4 (ENSHBUG00000023604) #21	ehmt2 (ENSHBUG00000023633) #20	zbtb12.2 (ENSHBUG00000023641) #19	nelfe (ENSHBUG00000023659) #16	skic2 (ENSHBUG00000000726) #15	ENSHBUG00000001657	ENSHBUG00000001675	neu1 (ENSHBUG00000001689) #22	neu1 (ENSHBUG00000001704) #22	prrc2a (ENSHBUG00000001725)	CSNK2B (ENSHBUG00000001738)	ENSHBUG00000001747
Lyretail cichlid	MODERN SPECIES	302									slc44a4 (ENSNBRG00000019010) #21	ENSNBRG00000018979 #20	zbtb12.2 (ENSNBRG00000018947) #19	nelfe (ENSNBRG00000018756) #16	skic2 (ENSNBRG00000018650) #15	ENSNBRG00000018621	ENSNBRG00000018602	neu1 (ENSNBRG00000018581) #22	neu1 (ENSNBRG00000018560) #22	prrc2a (ENSNBRG00000018524)	CSNK2B (ENSNBRG00000018509)	ENSNBRG00000018502	clic1 (ENSNBRG00000018485) #30	ENSNBRG00000018470	ddah2 (ENSNBRG00000018450) #31	rps5 (ENSNBRG00000018402)	ppt2b (ENSNBRG00000018366) #7	cratb (ENSNBRG00000018329)	ENSNBRG00000018296	nrm (ENSNBRG00000018283)	ENSNBRG00000018262	CLEC3B (ENSNBRG00000018249)	exosc7 (ENSNBRG00000018223)
Nile tilapia	MODERN SPECIES	13	EXT1 (ENSONIG00000007199)	med30 (ENSONIG00000013534)	SLC30A8 (ENSONIG00000013533)	ENSONIG00000037092	rad21b (ENSONIG00000013526)	utp23 (ENSONIG00000034452)	RNF5 (ENSONIG00000013523)	slc44a4 (ENSONIG00000013519) #21	ENSONIG00000040915	ehmt2 (ENSONIG00000013517) #20	zbtb12.2 (ENSONIG00000013516) #19	nelfe (ENSONIG00000013513) #16	skic2 (ENSONIG00000013500) #15	ENSONIG00000039529 #8	tmem268 (ENSONIG00000013498)	neu1 (ENSONIG00000013493) #22	CSNK2B (ENSONIG00000042521)	ENSONIG00000013490	ENSONIG00000029538	ENSONIG00000013488	ENSONIG00000043001	ENSONIG00000035151	ENSONIG00000033290	clic1 (ENSONIG00000019656) #30	rps5 (ENSONIG00000019659)	ENSONIG00000019657	ddah2 (ENSONIG00000032060) #31	ppt2b (ENSONIG00000036654) #7	cratb (ENSONIG00000019660)	ENSONIG00000030188	nrm (ENSONIG00000019661)
Midas cichlid	MODERN SPECIES	1156						RNF5 (ENSACIG00000016941)	slc44a4 (ENSACIG00000016903) #21	ENSACIG00000016889 #21	ENSACIG00000016856 #20	ENSACIG00000016829 #20	zbtb12.2 (ENSACIG00000016821) #19	nelfe (ENSACIG00000016797) #16	skic2 (ENSACIG00000016719) #15	ENSACIG00000016705	ENSACIG00000016683	neu1 (ENSACIG00000016666) #22	neu1 (ENSACIG00000016650) #22	ENSACIG00000016633	CSNK2B (ENSACIG00000016620)	ENSACIG00000016607
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C
Burton s mouthbrooder	MODERN SPECIES	470	med30 (ENSHBUG00000023252)	SLC30A8 (ENSHBUG00000023276)	ENSHBUG00000023296	ENSHBUG00000023305	rad21b (ENSHBUG00000023358)	utp23 (ENSHBUG00000023376)	RNF5 (ENSHBUG00000023420)	slc44a4 (ENSHBUG00000023604) #21	ehmt2 (ENSHBUG00000023633) #20	zbtb12.2 (ENSHBUG00000023641) #19	nelfe (ENSHBUG00000023659) #16	skic2 (ENSHBUG00000000726) #15	ENSHBUG00000001657	ENSHBUG00000001675	neu1 (ENSHBUG00000001689) #22	neu1 (ENSHBUG00000001704) #22	prrc2a (ENSHBUG00000001725)	CSNK2B (ENSHBUG00000001738)	ENSHBUG00000001747
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.g #22	ENSGT00950000182944.D.h #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C	ENSGT00940000155721.b.a
Eastern happy	MODERN SPECIES	13	ENSACLG00000006718	ENSACLG00000006721	zbtb22b (ENSACLG00000006727)	kifc1 (ENSACLG00000006737)	znf384a (ENSACLG00000006757)	FLOT1 (ENSACLG00000006791)	ENSACLG00000006812	ENSACLG00000006822	ENSACLG00000006834	zbtb12.2 (ENSACLG00000006841) #19	nelfe (ENSACLG00000006848) #16	skic2 (ENSACLG00000006886) #15	ENSACLG00000006990	ENSACLG00000006998	neu1 (ENSACLG00000007012) #22	neu1 (ENSACLG00000007026) #22	prrc2a (ENSACLG00000007033)	CSNK2B (ENSACLG00000007243)	ENSACLG00000007266	ENSACLG00000007272	ENSACLG00000007289	ddah2 (ENSACLG00000007297) #31	rps5 (ENSACLG00000007312)	ppt2b (ENSACLG00000007344) #7	cratb (ENSACLG00000007360)	nrm (ENSACLG00000007391)	ENSACLG00000007405	CLEC3B (ENSACLG00000007423)	exosc7 (ENSACLG00000007428)	zdhhc3b (ENSACLG00000007462)	TMEM42 (ENSACLG00000007471)
Zebra mbuna	MODERN SPECIES	1104	med30 (ENSMZEG00005026390)	SLC30A8 (ENSMZEG00005026391)	ENSMZEG00005026393	ENSMZEG00005026394	rad21b (ENSMZEG00005026396)	utp23 (ENSMZEG00005026398)	RNF5 (ENSMZEG00005026400)	slc44a4 (ENSMZEG00005026402) #21	ehmt2 (ENSMZEG00005026409) #20	zbtb12.2 (ENSMZEG00005026411) #19	nelfe (ENSMZEG00005026412) #16	skic2 (ENSMZEG00005026415) #15	ENSMZEG00005026421	ENSMZEG00005026422	neu1 (ENSMZEG00005026424) #22	neu1 (ENSMZEG00005026425) #22	prrc2a (ENSMZEG00005026426)	CSNK2B (ENSMZEG00005026427)	ENSMZEG00005026428	ENSMZEG00005026429	clic1 (ENSMZEG00005026431) #30	ENSMZEG00005026432	ddah2 (ENSMZEG00005026433) #31	rps5 (ENSMZEG00005026435)	ppt2b (ENSMZEG00005026441) #7	cratb (ENSMZEG00005026443)	nrm (ENSMZEG00005026446)	ENSMZEG00005026450	CLEC3B (ENSMZEG00005026453)	exosc7 (ENSMZEG00005026454)	zdhhc3b (ENSMZEG00005026457)
P. nyererei	MODERN SPECIES	521	med30 (ENSPNYG00000017531)	SLC30A8 (ENSPNYG00000017553)	ENSPNYG00000017577	ENSPNYG00000017586	rad21b (ENSPNYG00000017598)	utp23 (ENSPNYG00000017636)	RNF5 (ENSPNYG00000017658)	slc44a4 (ENSPNYG00000017693) #21	ehmt2 (ENSPNYG00000017805) #20	zbtb12.2 (ENSPNYG00000017827) #19	nelfe (ENSPNYG00000017837) #16	skic2 (ENSPNYG00000017853) #15	ENSPNYG00000017908 #8	ENSPNYG00000017922	neu1 (ENSPNYG00000017966) #22	neu1 (ENSPNYG00000017972) #22	prrc2a (ENSPNYG00000017989)	CSNK2B (ENSPNYG00000018029)	ENSPNYG00000018050
Lyretail cichlid	MODERN SPECIES	302								slc44a4 (ENSNBRG00000019010) #21	ENSNBRG00000018979 #20	zbtb12.2 (ENSNBRG00000018947) #19	nelfe (ENSNBRG00000018756) #16	skic2 (ENSNBRG00000018650) #15	ENSNBRG00000018621	ENSNBRG00000018602	neu1 (ENSNBRG00000018581) #22	neu1 (ENSNBRG00000018560) #22	prrc2a (ENSNBRG00000018524)	CSNK2B (ENSNBRG00000018509)	ENSNBRG00000018502	clic1 (ENSNBRG00000018485) #30	ENSNBRG00000018470	ddah2 (ENSNBRG00000018450) #31	rps5 (ENSNBRG00000018402)	ppt2b (ENSNBRG00000018366) #7	cratb (ENSNBRG00000018329)	ENSNBRG00000018296	nrm (ENSNBRG00000018283)	ENSNBRG00000018262	CLEC3B (ENSNBRG00000018249)	exosc7 (ENSNBRG00000018223)	TMEM42 (ENSNBRG00000018206)
Midas cichlid	MODERN SPECIES	1156					RNF5 (ENSACIG00000016941)	slc44a4 (ENSACIG00000016903) #21	ENSACIG00000016889 #21	ENSACIG00000016856 #20	ENSACIG00000016829 #20	zbtb12.2 (ENSACIG00000016821) #19	nelfe (ENSACIG00000016797) #16	skic2 (ENSACIG00000016719) #15	ENSACIG00000016705	ENSACIG00000016683	neu1 (ENSACIG00000016666) #22	neu1 (ENSACIG00000016650) #22	ENSACIG00000016633	CSNK2B (ENSACIG00000016620)	ENSACIG00000016607
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Zig-zag eel	MODERN SPECIES	2	SAMD12 (ENSMAMG00000003413)	EXT1 (ENSMAMG00000003396)	med30 (ENSMAMG00000003389)	SLC30A8 (ENSMAMG00000003358)	ENSMAMG00000003338	RAD21 (ENSMAMG00000003286)	UTP23 (ENSMAMG00000003259)	RNF5 (ENSMAMG00000003231)	ENSMAMG00000003151 #21	ehmt2 (ENSMAMG00000003077) #20	zbtb12.2 (ENSMAMG00000003046) #19	nelfe (ENSMAMG00000003031) #16	skic2 (ENSMAMG00000002927) #15	ENSMAMG00000002916	ENSMAMG00000002901	neu1 (ENSMAMG00000002880) #22	prrc2a (ENSMAMG00000002867)	ENSMAMG00000002844	ENSMAMG00000002833	ENSMAMG00000026891	ENSMAMG00000028185	ENSMAMG00000002822 #30	ENSMAMG00000027113	ddah2 (ENSMAMG00000002793) #31	ENSMAMG00000002747	ENSMAMG00000002733 #7	ENSMAMG00000002644	ENSMAMG00000002625	ENSMAMG00000002576	CLEC3B (ENSMAMG00000002568)	exosc7 (ENSMAMG00000002527)
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d	ENSGT00950000183130.C
Climbing perch	MODERN SPECIES	2	EXT1 (ENSATEG00000007374)	med30 (ENSATEG00000007379)	SLC30A8 (ENSATEG00000007400)	ENSATEG00000028774	RAD21 (ENSATEG00000007463)	UTP23 (ENSATEG00000028966)	RNF5 (ENSATEG00000025983)	ENSATEG00000007521 #21	ENSATEG00000028705	ehmt2 (ENSATEG00000029645) #20	zbtb12.2 (ENSATEG00000007566) #19	nelfe (ENSATEG00000030164) #16	skic2 (ENSATEG00000007601) #15	ENSATEG00000027316	ENSATEG00000007762	neu1 (ENSATEG00000007771) #22	ENSATEG00000007805	ENSATEG00000025178	ENSATEG00000028161	ENSATEG00000027438 #30	ENSATEG00000007886	ddah2 (ENSATEG00000007911) #31	ENSATEG00000027193	ENSATEG00000007948 #7	ENSATEG00000007961	ENSATEG00000008025	ENSATEG00000008049	ENSATEG00000008076	CLEC3B (ENSATEG00000008127)	exosc7 (ENSATEG00000008157)	zdhhc3b (ENSATEG00000008193)
Siamese fighting fish	MODERN SPECIES	2	SAMD12 (ENSBSLG00000018609)	EXT1 (ENSBSLG00000018504)	med30 (ENSBSLG00000018491)	SLC30A8 (ENSBSLG00000018479)	ENSBSLG00000018473	rad21b (ENSBSLG00000018427)	utp23 (ENSBSLG00000018419)	RNF5 (ENSBSLG00000018396)	slc44a4 (ENSBSLG00000014825) #21	ENSBSLG00000012621	zbtb12.2 (ENSBSLG00000012521) #19	nelfe (ENSBSLG00000012422) #16	skic2 (ENSBSLG00000011455) #15	ENSBSLG00000011440 #8	ENSBSLG00000011435	neu1 (ENSBSLG00000011391) #22	prrc2a (ENSBSLG00000011355)	CSNK2B (ENSBSLG00000011344)	ENSBSLG00000011342	ENSBSLG00000011339	clic1 (ENSBSLG00000011327) #30	ENSBSLG00000011322	ddah2 (ENSBSLG00000011316) #31	rps5 (ENSBSLG00000011291)	ppt2b (ENSBSLG00000011235) #7	cratb (ENSBSLG00000010910)	nrm (ENSBSLG00000010865)	ENSBSLG00000010822	CLEC3B (ENSBSLG00000010790)	exosc7 (ENSBSLG00000010718)	zdhhc3b (ENSBSLG00000010634)
Carangaria	ANCESTRAL SPECIES	14	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Pleuronectoidei	ANCESTRAL SPECIES	33	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Tongue sole	MODERN SPECIES	9	srd5a1 (ENSCSEG00000011484)	TENT4A (ENSCSEG00000011470)	med30 (ENSCSEG00000011459)	SLC30A8 (ENSCSEG00000011449)	ENSCSEG00000011444	rad21b (ENSCSEG00000011414)	utp23 (ENSCSEG00000011409)	RNF5 (ENSCSEG00000011404)	slc44a4 (ENSCSEG00000011388) #21	ehmt2 (ENSCSEG00000011369) #20	zbtb12.2 (ENSCSEG00000011365) #19	nelfe (ENSCSEG00000011352) #16	skic2 (ENSCSEG00000011326) #15	ENSCSEG00000011318	ENSCSEG00000011296	neu1 (ENSCSEG00000011291) #22	prrc2a (ENSCSEG00000011254)	CSNK2B (ENSCSEG00000011237)	ENSCSEG00000011232	ENSCSEG00000011228	clic1 (ENSCSEG00000011213) #30	ENSCSEG00000011221	cratb (ENSCSEG00000011178)	ppt2b (ENSCSEG00000011166) #7	rps5 (ENSCSEG00000011153)	ddah2 (ENSCSEG00000011148) #31	ENSCSEG00000011140	nrm (ENSCSEG00000011135)	ENSCSEG00000011099	CLEC3B (ENSCSEG00000011090)	exosc7 (ENSCSEG00000011080)
Turbot	MODERN SPECIES	14	ENSSMAG00000019879	ENSSMAG00000019890	ENSSMAG00000019959	ENSSMAG00000020065	TGFBR2 (ENSSMAG00000020096)	ENSSMAG00000020105	OSBPL10 (ENSSMAG00000020123)	ENSSMAG00000030367	zdhhc3b (ENSSMAG00000020136)	ENSSMAG00000020152 #20	zbtb12.2 (ENSSMAG00000024236) #19	nelfe (ENSSMAG00000020170) #16	skic2 (ENSSMAG00000020185) #15	ENSSMAG00000033775 #8	ENSSMAG00000020258	neu1 (ENSSMAG00000020263) #22	prrc2a (ENSSMAG00000020267)	ENSSMAG00000020301	ENSSMAG00000033794	ENSSMAG00000034574	ENSSMAG00000020309 #30	ENSSMAG00000020315	ddah2 (ENSSMAG00000037123) #31	ENSSMAG00000027758	ENSSMAG00000027538 #7	ENSSMAG00000020333	ENSSMAG00000020342	ENSSMAG00000020352	ENSSMAG00000020353	ENSSMAG00000020360	exosc7 (ENSSMAG00000020361)
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418.e #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Barramundi perch	MODERN SPECIES	468															ENSLCAG00010015352	neu1 (ENSLCAG00010015360) #22	ENSLCAG00010015365	ENSLCAG00010015371	CSNK2B (ENSLCAG00010015382)	ENSLCAG00010015389	ENSLCAG00010015390	ENSLCAG00010015391	clic1 (ENSLCAG00010015394) #30	ENSLCAG00010015397	ddah2 (ENSLCAG00010015401) #31	rps5 (ENSLCAG00010015426)	ppt2b (ENSLCAG00010015447) #7	cratb (ENSLCAG00010015467)	nrm (ENSLCAG00010015534)	ENSLCAG00010015535	ENSLCAG00010015537
Seriola	ANCESTRAL SPECIES	12	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418.e #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Greater amberjack	MODERN SPECIES	48	EXT1 (ENSSDUG00000020360)	med30 (ENSSDUG00000020346)	SLC30A8 (ENSSDUG00000020331)	ENSSDUG00000020320	ENSSDUG00000020310	rad21b (ENSSDUG00000020284)	utp23 (ENSSDUG00000020272)	RNF5 (ENSSDUG00000020248)	slc44a4 (ENSSDUG00000020183) #21	ehmt2 (ENSSDUG00000020109) #20	zbtb12.2 (ENSSDUG00000020096) #19	nelfe (ENSSDUG00000020062) #16	skic2 (ENSSDUG00000019977) #15	ENSSDUG00000019963	ENSSDUG00000019924	neu1 (ENSSDUG00000019908) #22	prrc2a (ENSSDUG00000019857)	CSNK2B (ENSSDUG00000019826)	ENSSDUG00000019815	ENSSDUG00000019811	ENSSDUG00000019801	clic1 (ENSSDUG00000019787) #30	ENSSDUG00000019764	ddah2 (ENSSDUG00000019740) #31	rps5 (ENSSDUG00000019721)	ppt2b (ENSSDUG00000019706) #7	cratb (ENSSDUG00000019682)	ENSSDUG00000019672	nrm (ENSSDUG00000019663)	ENSSDUG00000019620	CLEC3B (ENSSDUG00000019605)
Yellowtail amberjack	MODERN SPECIES	2459											ENSSLDG00000024420 #19	nelfe (ENSSLDG00000024412) #16	skic2 (ENSSLDG00000024382) #15	ENSSLDG00000024369	ENSSLDG00000024363	neu1 (ENSSLDG00000024355) #22	prrc2a (ENSSLDG00000024282)	CSNK2B (ENSSLDG00000024262)	ENSSLDG00000024260	ENSSLDG00000024256	ENSSLDG00000024251	clic1 (ENSSLDG00000024232) #30	ENSSLDG00000024229	ddah2 (ENSSLDG00000024202) #31	rps5 (ENSSLDG00000024207)	ppt2b (ENSSLDG00000024194) #7	cratb (ENSSLDG00000024175)	ENSSLDG00000024166	nrm (ENSSLDG00000024161)	ENSSLDG00000024130	CLEC3B (ENSSLDG00000024119)
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000180503	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Tetraodontidae	ANCESTRAL SPECIES	80				ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000180503	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255.f #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00390000008146
Fugu	MODERN SPECIES	3	trhrb (ENSTRUG00000028750)	nudcd1 (ENSTRUG00000031263)	ENY2 (ENSTRUG00000030468)	ENSTRUG00000030141	ENSTRUG00000022343	utp23 (ENSTRUG00000029642)	RNF5 (ENSTRUG00000003187)	ENSTRUG00000025400	slc44a4 (ENSTRUG00000002050) #21	ehmt2 (ENSTRUG00000001392) #20	zbtb12.2 (ENSTRUG00000028925) #19	nelfe (ENSTRUG00000029079) #16	skic2 (ENSTRUG00000000966) #15	ENSTRUG00000022529	ENSTRUG00000019830	neu1 (ENSTRUG00000000899) #22	CSNK2B (ENSTRUG00000000811)	ENSTRUG00000000809	ENSTRUG00000030962	clic1 (ENSTRUG00000029528) #30	ENSTRUG00000030780	ddah2 (ENSTRUG00000022274) #31	rps5 (ENSTRUG00000023565)	ppt2b (ENSTRUG00000025823) #7	cratb (ENSTRUG00000001748)	nrm (ENSTRUG00000002919)	HERPUD2 (ENSTRUG00000003161)	b4galt6 (ENSTRUG00000005318)	SLC4A7 (ENSTRUG00000003693)	eomesa (ENSTRUG00000005361)	ENSTRUG00000007482
Tetraodon	MODERN SPECIES	26	nr2f1a (ENSTNIG00000004157)	loxl5b (ENSTNIG00000000510)	nmrk2 (ENSTNIG00000000297)	ATCAY (ENSTNIG00000004156)	ENSTNIG00000004155	ENSTNIG00000004154	PRDM15 (ENSTNIG00000004148)	bcap31 (ENSTNIG00000004147)	plxna3 (ENSTNIG00000004146)	ENSTNIG00000004145	GGA1 (ENSTNIG00000004144)	ENSTNIG00000002437	ENSTNIG00000004143	pdk2b (ENSTNIG00000004142)	ENSTNIG00000001595	neu1 (ENSTNIG00000004137) #22	ENSTNIG00000001251	ENSTNIG00000004128	ENSTNIG00000001551	ENSTNIG00000001627	nlk2 (ENSTNIG00000004124)	ENSTNIG00000004116	ENSTNIG00000004115	poli (ENSTNIG00000004113)	RAB27B (ENSTNIG00000004112)	ST8SIA3 (ENSTNIG00000004111)	CCNG2 (ENSTNIG00000004110)	ENSTNIG00000000212	gnb3b (ENSTNIG00000004096)	CHD4 (ENSTNIG00000004095)	ENSTNIG00000004089
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00940000176888	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1096														ENSLBEG00000019957	ENSLBEG00000019985	neu1 (ENSLBEG00000020038) #22	prrc2a (ENSLBEG00000020103)
Ballan wrasse	MODERN SPECIES	3644																neu1 (ENSLBEG00000008858) #22
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Perciformes	ANCESTRAL SPECIES	11	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000177553	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146
Pike perch	MODERN SPECIES	13	SAMD12 (ENSSLUG00000013785)	EXT1 (ENSSLUG00000013790)	med30 (ENSSLUG00000013801)	SLC30A8 (ENSSLUG00000013837)	ENSSLUG00000013845	rad21b (ENSSLUG00000013857)	utp23 (ENSSLUG00000013889)	RNF5 (ENSSLUG00000013897)	slc44a4 (ENSSLUG00000014023) #21	ehmt2 (ENSSLUG00000016446) #20	zbtb12.2 (ENSSLUG00000016800) #19	nelfe (ENSSLUG00000016809) #16	skic2 (ENSSLUG00000016902) #15	ENSSLUG00000018232 #8	ENSSLUG00000005072	neu1 (ENSSLUG00000005089) #22	prrc2a (ENSSLUG00000005116)	CSNK2B (ENSSLUG00000005147)	ENSSLUG00000005170	ENSSLUG00000005177	ENSSLUG00000005181	ENSSLUG00000005188	clic1 (ENSSLUG00000005193) #30	ENSSLUG00000005210	ddah2 (ENSSLUG00000005223) #31	rps5 (ENSSLUG00000005247)	ppt2b (ENSSLUG00000005386) #7	cratb (ENSSLUG00000005548)	ENSSLUG00000006589	nrm (ENSSLUG00000006595)	ENSSLUG00000006600
Channel bull blenny	MODERN SPECIES	2	cyp51 (ENSCGOG00000001577)	krit1 (ENSCGOG00000001842)	rpz2 (ENSCGOG00000002092)	si:dkey-266f7.9 (ENSCGOG00000002093)	ENSCGOG00000002096	ENSCGOG00000002099	prcc (ENSCGOG00000002100)	RNF5 (ENSCGOG00000002102)	slc44a4 (ENSCGOG00000002109) #21	ehmt2 (ENSCGOG00000002267) #20	zbtb12.2 (ENSCGOG00000005417) #19	nelfe (ENSCGOG00000005425) #16	skic2 (ENSCGOG00000005492) #15	ENSCGOG00000006118 #8	ENSCGOG00000006119	neu1 (ENSCGOG00000006122) #22	prrc2a (ENSCGOG00000006123)	CSNK2B (ENSCGOG00000006127)	ENSCGOG00000006184	ENSCGOG00000006186	ENSCGOG00000006188	ENSCGOG00000006189	clic1 (ENSCGOG00000006191) #30	ENSCGOG00000006198	ddah2 (ENSCGOG00000006200) #31	rps5 (ENSCGOG00000006206)	ppt2b (ENSCGOG00000006299) #7	cratb (ENSCGOG00000006473)	ENSCGOG00000007525	nrm (ENSCGOG00000007527)	ENSCGOG00000007528
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Lumpfish	MODERN SPECIES	2	SAMD12 (ENSCLMG00005001370)	EXT1 (ENSCLMG00005001450)	med30 (ENSCLMG00005001856)	SLC30A8 (ENSCLMG00005001905)	ENSCLMG00005001927	RAD21 (ENSCLMG00005001929)	utp23 (ENSCLMG00005001933)	RNF5 (ENSCLMG00005001935)	slc44a4 (ENSCLMG00005002004) #21	ehmt2 (ENSCLMG00005009291) #20	zbtb12.2 (ENSCLMG00005012451) #19	nelfe (ENSCLMG00005012452) #16	skic2 (ENSCLMG00005012457) #15	ENSCLMG00005012491 #8	ENSCLMG00005012493	neu1 (ENSCLMG00005012494) #22	prrc2a (ENSCLMG00005012495)	CSNK2B (ENSCLMG00005012499)	ENSCLMG00005012509	ENSCLMG00005012512	ENSCLMG00005012514	ENSCLMG00005012516	clic1 (ENSCLMG00005012518) #30	ENSCLMG00005012520	ENSCLMG00005012521	ddah2 (ENSCLMG00005012522) #31	rps5 (ENSCLMG00005012523)	ppt2b (ENSCLMG00005012558) #7	cratb (ENSCLMG00005012585)	ENSCLMG00005014243	nrm (ENSCLMG00005014244)
Stickleback	MODERN SPECIES	9	angpt1 (ENSGACG00000003020)	EXT1 (ENSGACG00000003017)	med30 (ENSGACG00000003014)	SLC30A8 (ENSGACG00000002999)	ENSGACG00000002989	rad21b (ENSGACG00000002984)	utp23 (ENSGACG00000002979)	RNF5 (ENSGACG00000002972)	slc44a4 (ENSGACG00000002956) #21	ehmt2 (ENSGACG00000002946) #20	zbtb12.2 (ENSGACG00000002943) #19	nelfe (ENSGACG00000002935) #16	skic2 (ENSGACG00000002927) #15	PRRT1 (ENSGACG00000002923) #8	ENSGACG00000002916	neu1 (ENSGACG00000002914) #22	ENSGACG00000002910	CSNK2B (ENSGACG00000002898)	ENSGACG00000002897	ENSGACG00000002895	clic1 (ENSGACG00000002885) #30	ENSGACG00000002884	ddah2 (ENSGACG00000002872) #31	rps5 (ENSGACG00000002835)	ppt2b (ENSGACG00000002811) #7	cratb (ENSGACG00000002769)	ENSGACG00000002768	nrm (ENSGACG00000002754)	ENSGACG00000002741	zgc:114119 (ENSGACG00000002740)	ENSGACG00000002738
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT00390000008161.a.b	ENSGT00940000155321.d.b	ENSGT00390000010887.a	ENSGT00940000160706	ENSGT00990000203789	ENSGT00940000154655.a.i.b	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a	ENSGT00950000183186.B.b.d
European seabass	MODERN SPECIES	22	abrab (ENSDLAG00005027756)	SAMD12 (ENSDLAG00005033702)	EXT1 (ENSDLAG00005030185)	med30 (ENSDLAG00005012901)	SLC30A8 (ENSDLAG00005012517)	ENSDLAG00005035069	RAD21 (ENSDLAG00005029796)	UTP23 (ENSDLAG00005028087)	ENSDLAG00005030177	ENSDLAG00005011618 #21	ehmt2 (ENSDLAG00005007748) #20	zbtb12.2 (ENSDLAG00005029533) #19	nelfe (ENSDLAG00005029599) #16	skic2 (ENSDLAG00005007147) #15	ENSDLAG00005007104	neu1 (ENSDLAG00005007092) #22	prrc2a (ENSDLAG00005007056)	ENSDLAG00005007036	ENSDLAG00005007023	ENSDLAG00005007015	ENSDLAG00005006984	ENSDLAG00005006997	ENSDLAG00005006991	clic1 (ENSDLAG00005030110) #30	ENSDLAG00005029255	ENSDLAG00005006875	ENSDLAG00005027318 #7	ENSDLAG00005005970	ENSDLAG00005005921	ENSDLAG00005029307	CDCP1 (ENSDLAG00005005889)
Large yellow croaker	MODERN SPECIES	484	pip4p2 (ENSLCRG00005019190)	necab1 (ENSLCRG00005019198)	tmem64 (ENSLCRG00005003016)	tdp2b (ENSLCRG00005003027)	acot13 (ENSLCRG00005003036)	zgc:111986 (ENSLCRG00005003041)	gmnn (ENSLCRG00005003047)	RNF5 (ENSLCRG00005003053)	slc44a4 (ENSLCRG00005003471) #21	ehmt2 (ENSLCRG00005005745) #20	zbtb12.2 (ENSLCRG00005008202) #19	nelfe (ENSLCRG00005008210) #16	skic2 (ENSLCRG00005008310) #15	ENSLCRG00005009060	ENSLCRG00005009069	neu1 (ENSLCRG00005009074) #22	prrc2a (ENSLCRG00005009082)	CSNK2B (ENSLCRG00005009110)	ENSLCRG00005009120	ENSLCRG00005009121	ENSLCRG00005009123	clic1 (ENSLCRG00005009131) #30	ENSLCRG00005009156	ddah2 (ENSLCRG00005009167) #31	rps5 (ENSLCRG00005009187)	ppt2b (ENSLCRG00005009282) #7	cratb (ENSLCRG00005009486)	ENSLCRG00005010257	nrm (ENSLCRG00005010259)	CDCP1 (ENSLCRG00005010261)	CLEC3B (ENSLCRG00005010268)
Gilthead seabream	MODERN SPECIES	17	SLC30A8 (ENSSAUG00010012681)	ENSSAUG00010012686	ENSSAUG00010012690	ENSSAUG00010012693	ENSSAUG00010012695	rad21b (ENSSAUG00010012701)	utp23 (ENSSAUG00010012762)	RNF5 (ENSSAUG00010012764)	slc44a4 (ENSSAUG00010012789) #21	ehmt2 (ENSSAUG00010014649) #20	zbtb12.2 (ENSSAUG00010017424) #19	nelfe (ENSSAUG00010017428) #16	skic2 (ENSSAUG00010017486) #15	ENSSAUG00010018406 #8	ENSSAUG00010018408	neu1 (ENSSAUG00010018410) #22	prrc2a (ENSSAUG00010018412)	CSNK2B (ENSSAUG00010018414)	ENSSAUG00010018417	ENSSAUG00010018418	ENSSAUG00010018420	clic1 (ENSSAUG00010018422) #30	ENSSAUG00010018424	ddah2 (ENSSAUG00010018425) #31	ppt2b (ENSSAUG00010018429) #7	cratb (ENSSAUG00010018476)	ENSSAUG00010020071	nrm (ENSSAUG00010020074)	ENSSAUG00010020083	CLEC3B (ENSSAUG00010020089)	exosc7 (ENSSAUG00010020096)
Cod	MODERN SPECIES	14	ENSGMOG00000023708	med30 (ENSGMOG00000003964)	ENSGMOG00000004007	SLC30A8 (ENSGMOG00000016895)	ENSGMOG00000035379	ENSGMOG00000028439	ENSGMOG00000015475	ENSGMOG00000009529	ENSGMOG00000004191 #21	ehmt2 (ENSGMOG00000006007) #20	zbtb12.2 (ENSGMOG00000028530) #19	nelfe (ENSGMOG00000005973) #16	skic2 (ENSGMOG00000005926) #15	ENSGMOG00000034638 #8	ENSGMOG00000029128	neu1 (ENSGMOG00000005871) #22	ENSGMOG00000027105	ENSGMOG00000005830	ENSGMOG00000036885	ENSGMOG00000024033	ENSGMOG00000025005	ENSGMOG00000030608	ENSGMOG00000019244 #30	ENSGMOG00000016558	ENSGMOG00000036860	ENSGMOG00000031797	anxa14 (ENSGMOG00000015108)	ENSGMOG00000005873	ENSGMOG00000024846	ENSGMOG00000022403	cdca8 (ENSGMOG00000009567)
Protacanthopterygii	ANCESTRAL SPECIES		ENSGT00390000010887.a.j.b	ENSGT00940000160706	ENSGT01030000235077	ENSGT00940000154655.a.i.b	ENSGT00940000169609	ENSGT00940000153117.A	ENSGT00390000014107.a.b	ENSGT00940000180503	ENSGT00940000160576 #21	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00940000177553	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00390000008146	ENSGT00390000010209.c.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	186	ENSGT00940000155321.d.b.b	ENSGT00390000010887.a.i.a	ENSGT00940000160706.l	ENSGT01030000235077	ENSGT00940000154655.a.i.b.d	ENSGT00940000153117.A.`b	ENSGT00940000159459.bb #20	ENSGT00940000160576.e.a #21	ENSGT00940000180503	ENSGT00390000014107.a.b.bb	ENSGT00940000162418.c #19	ENSGT00630000089917.l #16	ENSGT00940000158255.c #15	ENSGT00940000166893.b	ENSGT00390000011559.g	ENSGT00950000182944.D.k #22	ENSGT00950000183161.a.a.e	ENSGT00390000003781.e.b.a	ENSGT00510000049347.h.c	ENSGT00910000144740	ENSGT00910000144759	ENSGT00940000154708.b #30	ENSGT00940000160769.e #31	ENSGT00390000010806.ic	ENSGT00940000155779.a.b.e #7	ENSGT01060000248556.A.a.a.b.m	ENSGT00940000170244.b	ENSGT00390000008146	ENSGT00940000159019.w	ENSGT00390000010209.c.a.g	ENSGT00950000183130.C
Huchen	MODERN SPECIES	70	EXT1 (ENSHHUG00000031470)	med30 (ENSHHUG00000031498)	SLC30A8 (ENSHHUG00000031505)	ENSHHUG00000031518	rad21b (ENSHHUG00000031523)	utp23 (ENSHHUG00000031570)	ehmt2 (ENSHHUG00000031576) #20	slc44a4 (ENSHHUG00000031696) #21	RNF5 (ENSHHUG00000031940)	ZBTB12 (ENSHHUG00000031948) #19	nelfe (ENSHHUG00000031949) #16	skic2 (ENSHHUG00000031956) #15	ENSHHUG00000032077	ENSHHUG00000032081	ENSHHUG00000032085	neu1 (ENSHHUG00000032087) #22	prrc2a (ENSHHUG00000032094)	ENSHHUG00000032096	ENSHHUG00000032170	ENSHHUG00000032171	clic1 (ENSHHUG00000032172) #30	ddah2 (ENSHHUG00000032184) #31	rps5 (ENSHHUG00000032206)	ppt2b (ENSHHUG00000032416) #7	cratb (ENSHHUG00000032450)	ENSHHUG00000032590	CLEC3B (ENSHHUG00000032601)	zdhhc3b (ENSHHUG00000032604)	TMEM42 (ENSHHUG00000032611)	OSBPL10 (ENSHHUG00000032615)	STT3B (ENSHHUG00000032620)
Salmoninae_a	ANCESTRAL SPECIES	48	ENSGT00940000155321.d.b.b	ENSGT00390000010887.a.i.a	ENSGT00940000160706.l	ENSGT01030000235077	ENSGT00940000154655.a.i.b.d	ENSGT00940000153117.A.`b	ENSGT00940000159459.bb #20	ENSGT00940000160576.e.a #21	ENSGT00940000180503	ENSGT00390000014107.a.b.bb	ENSGT00940000162418.c #19	ENSGT00630000089917.l #16	ENSGT00940000158255.c #15	ENSGT00940000166893.b	ENSGT00390000011559.g	ENSGT00950000182944.D.k #22	ENSGT00950000183161.a.a.e	ENSGT00390000003781.e.b.a	ENSGT00510000049347.h.c	ENSGT00910000144740	ENSGT00910000144759.j	ENSGT00940000154708.b #30	ENSGT00940000160769.e #31	ENSGT00390000010806.ic	ENSGT00940000155779.a.b.e #7	ENSGT01060000248556.A.a.a.b.m	ENSGT00940000170244.b	ENSGT00390000008146	ENSGT00390000010209.c.a.g	ENSGT00950000183130.C	ENSGT00940000155721.b.a.f
Salmo	ANCESTRAL SPECIES	2	ENSGT00390000008161.a.b.c	ENSGT00940000155321.d.b.b	ENSGT00390000010887.a.i.a	ENSGT00940000160706.l	ENSGT01030000235077	ENSGT00940000154655.a.i.b.d	ENSGT00940000153117.A.`b	ENSGT00940000159459.bb #20	ENSGT00940000160576.e.a #21	ENSGT00390000014107.a.b.bb	ENSGT00940000162418.c #19	ENSGT00630000089917.l #16	ENSGT00940000158255.c #15	ENSGT00940000166893.b	ENSGT00390000011559.g	ENSGT00950000182944.D.k #22	ENSGT00950000183161.a.a.e	ENSGT00390000003781.e.b.a	ENSGT00510000049347.h.c	ENSGT00910000144740.k	ENSGT00910000144759.j	ENSGT00940000154708.b #30	ENSGT00940000160769.e #31	ENSGT00390000010806.ic	ENSGT00940000155779.a.b.e #7	ENSGT01060000248556.A.a.a.b.m	ENSGT00940000170244.b	ENSGT00390000008146.j	ENSGT00390000010209.c.a.h	ENSGT00950000183186.B.b.d	ENSGT00940000155721.b.a.e
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000097363	med30 (ENSSSAG00000075597)	SLC30A8 (ENSSSAG00000092703)	ENSSSAG00000097566	utp23 (ENSSSAG00000075589)	ehmt2 (ENSSSAG00000074873) #20	ENSSSAG00000073979 #21	ENSSSAG00000120859	ZBTB12 (ENSSSAG00000073938) #19	nelfe (ENSSSAG00000073936) #16	skic2 (ENSSSAG00000073865) #15	ENSSSAG00000117894	ENSSSAG00000073848	ENSSSAG00000073845	ENSSSAG00000085981	neu1 (ENSSSAG00000073842) #22	prrc2a (ENSSSAG00000073828)	ENSSSAG00000073825	spaca4l (ENSSSAG00000094685)	ENSSSAG00000101947	ENSSSAG00000093392	ENSSSAG00000073819	ENSSSAG00000073817	ENSSSAG00000073816	ENSSSAG00000073807 #30	ddah2 (ENSSSAG00000073802) #31	ENSSSAG00000073777	ENSSSAG00000111391 #7	ENSSSAG00000071895	ENSSSAG00000071826	ENSSSAG00000071822
River trout	MODERN SPECIES	29	med30 (ENSSTUG00000023874)	SLC30A8 (ENSSTUG00000023896)	ENSSTUG00000023915	rad21b (ENSSTUG00000023926)	utp23 (ENSSTUG00000023970)	ehmt2 (ENSSTUG00000024086) #20	slc44a4 (ENSSTUG00000027811) #21	ENSSTUG00000028348	ZBTB12 (ENSSTUG00000028370) #19	nelfe (ENSSTUG00000028378) #16	skic2 (ENSSTUG00000028488) #15	ENSSTUG00000031058	ENSSTUG00000031066	ENSSTUG00000031081	ENSSTUG00000031084	neu1 (ENSSTUG00000031092) #22	prrc2a (ENSSTUG00000031096)	CSNK2B (ENSSTUG00000031103)	ENSSTUG00000031115	ENSSTUG00000031131	ENSSTUG00000031136	ENSSTUG00000031139	ENSSTUG00000031144	clic1 (ENSSTUG00000031154) #30	ddah2 (ENSSTUG00000031174) #31	rps5 (ENSSTUG00000031195)	ppt2b (ENSSTUG00000031365) #7	cratb (ENSSTUG00000031486)	ENSSTUG00000032366	nrm (ENSSTUG00000032376)	CDCP1 (ENSSTUG00000032408)
Oncorhynchus	ANCESTRAL SPECIES	40	ENSGT00940000155321.d.b.b	ENSGT00390000010887.a.i.a	ENSGT00940000160706.l	ENSGT01030000235077	ENSGT00940000154655.a.i.b.d	ENSGT00940000153117.A.`b	ENSGT00940000159459.bb #20	ENSGT00940000160576.e.a #21	ENSGT00940000180503	ENSGT00390000014107.a.b.bb	ENSGT00940000162418.c #19	ENSGT00630000089917.l #16	ENSGT00940000158255.c #15	ENSGT00940000166893.b	ENSGT00390000011559.g	ENSGT00950000182944.D.k #22	ENSGT00950000183161.a.a.e	ENSGT00390000003781.e.b.a	ENSGT00510000049347.h.c	ENSGT00910000144740	ENSGT00910000144759.j	ENSGT00940000154708.b #30	ENSGT00390000002843.b.d	ENSGT00940000160769.e #31	ENSGT00390000010806.ic	ENSGT00940000155779.a.b.e #7	ENSGT01060000248556.A.a.a.b.m	ENSGT00390000010209.c.a.h	ENSGT00950000183186.B.b.d	ENSGT00940000155721.b.a.e	ENSGT00390000012690.b.b
Oncorhynchus_a	ANCESTRAL SPECIES	45	ENSGT00940000155321.d.b.b	ENSGT00390000010887.a.i.a	ENSGT00940000160706.l	ENSGT01030000235077	ENSGT00940000154655.a.i.b.d	ENSGT00940000153117.A.`b	ENSGT00940000159459.bb #20	ENSGT00940000160576.e.a #21	ENSGT00940000180503	ENSGT00390000014107.a.b.bb	ENSGT00940000162418.c #19	ENSGT00630000089917.l #16	ENSGT00940000158255.c #15	ENSGT00940000166893.b	ENSGT00390000011559.g	ENSGT00950000182944.D.k #22	ENSGT00950000183161.a.a.e	ENSGT00390000003781.e.b.a	ENSGT00510000049347.h.c	ENSGT00910000144740	ENSGT00910000144759.j	ENSGT00940000154708.b #30	ENSGT00390000002843.b.d	ENSGT00940000160769.e #31	ENSGT00390000010806.ic.b	ENSGT00390000010806.ic.a	ENSGT00940000155779.a.b.e #7	ENSGT01060000248556.A.a.a.b.m	ENSGT00390000010209.c.a.h	ENSGT00950000183186.B.b.d	ENSGT00940000155721.b.a.e
Chinook salmon	MODERN SPECIES	24	med30 (ENSOTSG00005029776)	SLC30A8 (ENSOTSG00005029777)	ENSOTSG00005029778	rad21b (ENSOTSG00005029779)	utp23 (ENSOTSG00005029804)	ehmt2 (ENSOTSG00005029823) #20	slc44a4 (ENSOTSG00005031075) #21	ENSOTSG00005032058	ENSOTSG00005032059	ZBTB12 (ENSOTSG00005032060) #19	nelfe (ENSOTSG00005032061) #16	skic2 (ENSOTSG00005032064) #15	ENSOTSG00005032820	ENSOTSG00005032821	ENSOTSG00005032822	neu1 (ENSOTSG00005032823) #22	prrc2a (ENSOTSG00005032824)	ENSOTSG00005032826	ENSOTSG00005032834	ENSOTSG00005032835	ENSOTSG00005032837	clic1 (ENSOTSG00005032839) #30	ENSOTSG00005032840	ddah2 (ENSOTSG00005032841) #31	rps5 (ENSOTSG00005032846)	ppt2b (ENSOTSG00005032993) #7	cratb (ENSOTSG00005033008)	ENSOTSG00005037300	CLEC3B (ENSOTSG00005037302)	zdhhc3b (ENSOTSG00005037303)	TMEM42 (ENSOTSG00005037305)
Coho salmon	MODERN SPECIES	5	SLC30A8 (ENSOKIG00005013980)	ENSOKIG00005013969	RAD21 (ENSOKIG00005013935)	utp23 (ENSOKIG00005013929)	ehmt2 (ENSOKIG00005011758) #20	slc44a4 (ENSOKIG00005011019) #21	ENSOKIG00005010955	RNF5 (ENSOKIG00005010933)	ZBTB12 (ENSOKIG00005010927) #19	nelfe (ENSOKIG00005010919) #16	skic2 (ENSOKIG00005009139) #15	ENSOKIG00005009057	ENSOKIG00005009050	ENSOKIG00005009041	ENSOKIG00005009035	neu1 (ENSOKIG00005009026) #22	prrc2a (ENSOKIG00005009017)	CSNK2B (ENSOKIG00005008998)	ENSOKIG00005008977	ENSOKIG00005008964	ENSOKIG00005008949	CLIC1 (ENSOKIG00005008932) #30	ENSOKIG00005008924	ddah2 (ENSOKIG00005008919) #31	rps5 (ENSOKIG00005008714)	ppt2b (ENSOKIG00005008611) #7	cratb (ENSOKIG00005007311)	CDCP1 (ENSOKIG00005007231)	CLEC3B (ENSOKIG00005007225)	zdhhc3b (ENSOKIG00005007216)	TMEM42 (ENSOKIG00005007211)
Rainbow trout	MODERN SPECIES	24	ENSOMYG00000010121	ENSOMYG00000071260	ENSOMYG00000070545	RAD21 (ENSOMYG00000010140)	UTP23 (ENSOMYG00000063849)	ehmt2 (ENSOMYG00000021424) #20	ENSOMYG00000050000	ENSOMYG00000009077 #21	ENSOMYG00000039298	ZBTB12 (ENSOMYG00000077422) #19	nelfe (ENSOMYG00000040631) #16	skic2 (ENSOMYG00000040677) #15	ENSOMYG00000040688 #8	ENSOMYG00000010477	ENSOMYG00000010484	neu1 (ENSOMYG00000010434) #22	prrc2a (ENSOMYG00000010352)	ENSOMYG00000010502	ENSOMYG00000060153	ENSOMYG00000010530	ENSOMYG00000072044	ENSOMYG00000070987	ENSOMYG00000010576	ENSOMYG00000010592 #30	ENSOMYG00000021217	ddah2 (ENSOMYG00000008033) #31	rs5 (ENSOMYG00000038712)	ENSOMYG00000010707 #7	ENSOMYG00000010794	ENSOMYG00000058796	ENSOMYG00000068479
Salmoninae	ANCESTRAL SPECIES	430			ENSGT00940000155321.d.b.a	ENSGT00390000010887.a.j.b	ENSGT00940000160706.k	ENSGT00940000154655.a.i.b.c	ENSGT00940000153117.A.z	ENSGT00390000014107.a.b.cb	ENSGT00940000160576.e.b #21	ENSGT00940000159459.cb #20	ENSGT00940000162418.d #19	ENSGT00630000089917.k #16	ENSGT00940000158255.d #15	ENSGT00940000166893.a	ENSGT00390000011559.h	ENSGT00950000182944.D.l #22	ENSGT00950000183161.a.a.f	ENSGT00390000003781.e.b.b	ENSGT00510000049347.h.d	ENSGT00940000177553	ENSGT00940000154708.a #30	ENSGT00390000002843.b	ENSGT00940000160769.f #31	ENSGT00390000010806.hc.b	ENSGT00940000155779.a.b.f #7	ENSGT01060000248556.A.a.a.b.n	ENSGT00940000170244.a
Salmoninae_a	ANCESTRAL SPECIES	5	ENSGT00390000015984.d	ENSGT00390000008161.a.b.d	ENSGT00940000155321.d.b.a	ENSGT00390000010887.a.j.b	ENSGT00940000160706.k	ENSGT00940000154655.a.i.b.c	ENSGT00940000153117.A.z	ENSGT00390000014107.a.b.cb	ENSGT00940000160576.e.b #21	ENSGT00940000159459.cb #20	ENSGT00940000162418.d #19	ENSGT00630000089917.k #16	ENSGT00940000158255.d #15	ENSGT00940000166893.a	ENSGT00390000011559.h	ENSGT00950000182944.D.l #22	ENSGT00940000166158.a.a.b	ENSGT00940000163756.c.a.a	ENSGT01050000244883.A.b	ENSGT01010000223632.b	ENSGT00390000003308.a.b	ENSGT00940000165835.b.e	ENSGT00940000158616.k.a	ENSGT00390000015518	ENSGT00940000155256.d.b.b.a	ENSGT00990000203527.b	ENSGT00990000203527.a.a.a.e.b	ENSGT00390000007227.a.j	ENSGT00390000018560.a.a.a.a.b.j.a	ENSGT00390000018560.a.a.a.a.b.i	ENSGT00940000160991.b.d
Oncorhynchus	ANCESTRAL SPECIES	16	ENSGT00390000015984.d	ENSGT00390000008161.a.b.d	ENSGT00940000155321.d.b.a	ENSGT00390000010887.a.j.b	ENSGT00940000160706.k	ENSGT00940000154655.a.i.b.c	ENSGT00940000153117.A.z	ENSGT00390000014107.a.b.cb	ENSGT00940000160576.e.b #21	ENSGT00940000159459.cb #20	ENSGT00940000162418.d #19	ENSGT00630000089917.k #16	ENSGT00940000158255.d #15	ENSGT00940000166893.a	ENSGT00390000011559.h	ENSGT00950000182944.D.l #22	ENSGT00940000166158.a.a.b	ENSGT00940000163756.c.a.a	ENSGT01050000244883.A.b	ENSGT01010000223632.b	ENSGT00940000164807.G.a.b.e.a.a.a.a.b	ENSGT00390000003308.a.b	ENSGT00940000165835.b.e	ENSGT00940000158616.k.a	ENSGT00390000015518	ENSGT00940000155256.d.b.b.a	ENSGT00390000018560.a.a.a.a.b.j.a.a	ENSGT00390000018560.a.a.a.a.b.i	ENSGT00390000018560.a.a.a.a.b.j.a.b	ENSGT00940000160991.b.c.b	ENSGT00390000014772.k
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00390000015984.d	ENSGT00390000008161.a.b.d	ENSGT00940000155321.d.b.a	ENSGT00390000010887.a.j.b	ENSGT00940000160706.k	ENSGT00940000154655.a.i.b.c	ENSGT00940000153117.A.z	ENSGT00390000014107.a.b.cb	ENSGT00940000160576.e.b #21	ENSGT00940000159459.cb #20	ENSGT00940000162418.d #19	ENSGT00630000089917.k #16	ENSGT00940000158255.d #15	ENSGT00940000166893.a	ENSGT00390000011559.h	ENSGT00950000182944.D.l #22	ENSGT00940000166158.a.a.b	ENSGT00940000163756.c.a.a	ENSGT01050000244883.A.b	ENSGT01010000223632.b	ENSGT00940000164807.G.a.b.e.a.a.a.a.b	ENSGT00390000003308.a.b	ENSGT00940000165835.b.e	ENSGT00940000158616.k.a	ENSGT00390000015518	ENSGT00940000155256.d.b.b.a	ENSGT00390000018560.a.a.a.a.b.j.a.a	ENSGT00390000018560.a.a.a.a.b.i	ENSGT00390000018560.a.a.a.a.b.j.a.b	ENSGT00940000160991.b.c.b	ENSGT00390000014772.k
Coho salmon	MODERN SPECIES	8	abrab (ENSOKIG00005049064)	SAMD12 (ENSOKIG00005014439)	EXT1 (ENSOKIG00005014462)	med30 (ENSOKIG00005014493)	SLC30A8 (ENSOKIG00005014511)	rad21b (ENSOKIG00005014520)	UTP23 (ENSOKIG00005014619)	RNF5 (ENSOKIG00005014629)	SLC44A4 (ENSOKIG00005014729) #21	ehmt2 (ENSOKIG00005016197) #20	ENSOKIG00005017017 #19	nelfe (ENSOKIG00005017023) #16	skic2 (ENSOKIG00005017068) #15	ENSOKIG00005017264	ENSOKIG00005017267	neu1 (ENSOKIG00005017281) #22	ENSOKIG00005017285	ENSOKIG00005017292	ENSOKIG00005017296	ENSOKIG00005017305	ENSOKIG00005017326	ENSOKIG00005017332	ENSOKIG00005017340	ENSOKIG00005017343	ENSOKIG00005017352	ENSOKIG00005017360	ENSOKIG00005017435	SLC9A3 (ENSOKIG00005017580)	olah (ENSOKIG00005018159)	ENSOKIG00005018226	si:dkey-211g8.7 (ENSOKIG00005018837)
Chinook salmon	MODERN SPECIES	4	sdc2 (ENSOTSG00005010158)	angpt1 (ENSOTSG00005010160)	SAMD12 (ENSOTSG00005010170)	EXT1 (ENSOTSG00005010171)	med30 (ENSOTSG00005010172)	SLC30A8 (ENSOTSG00005010173)	rad21b (ENSOTSG00005010177)	utp23 (ENSOTSG00005010229)	slc44a4 (ENSOTSG00005010231) #21	ehmt2 (ENSOTSG00005010237) #20	ENSOTSG00005011977 #19	nelfe (ENSOTSG00005011978) #16	skic2 (ENSOTSG00005011981) #15	ENSOTSG00005012001	ENSOTSG00005012004	neu1 (ENSOTSG00005012005) #22	ENSOTSG00005012007	ENSOTSG00005012008	ENSOTSG00005012011	ENSOTSG00005012017	ENSOTSG00005012018	ENSOTSG00005012019	ENSOTSG00005012031	naa40 (ENSOTSG00005012702)	b3gat3 (ENSOTSG00005012703)	ENSOTSG00005012705	arl2 (ENSOTSG00005001670)	ENSOTSG00005001987	ENSOTSG00005002079	ENSOTSG00005002288	ENSOTSG00005002292
Rainbow trout	MODERN SPECIES	9	EXT1 (ENSOMYG00000034235)	med30 (ENSOMYG00000034230)	SLC30A8 (ENSOMYG00000034219)	ENSOMYG00000063545	RAD21 (ENSOMYG00000044284)	ENSOMYG00000077010	ENSOMYG00000044269	ENSOMYG00000043772 #21	ehmt2 (ENSOMYG00000043314) #20	ENSOMYG00000043229 #19	nelfe (ENSOMYG00000043224) #16	ENSOMYG00000043220	skic2 (ENSOMYG00000042947) #15	ENSOMYG00000042902 #8	ENSOMYG00000042896	neu1 (ENSOMYG00000042892) #22	ENSOMYG00000054238	ENSOMYG00000070826	ENSOMYG00000042884	ENSOMYG00000042871	ENSOMYG00000042861	ENSOMYG00000042856	ENSOMYG00000031915	ENSOMYG00000042762	ENSOMYG00000056564	ENSOMYG00000042138	ENSOMYG00000041685	olah (ENSOMYG00000041629)	ENSOMYG00000041450	ENSOMYG00000041396	si:dkey-211g8.7 (ENSOMYG00000041393)
Salmo	ANCESTRAL SPECIES	40	ENSGT00390000008161.a.b.d	ENSGT00940000155321.d.b.a	ENSGT00390000010887.a.j.b	ENSGT00940000160706.k	ENSGT00940000154655.a.i.b.c	ENSGT00940000153117.A.z.b	ENSGT00940000153117.A.z.a	ENSGT00390000014107.a.b.cb	ENSGT00940000160576.e.b #21	ENSGT00940000159459.cb #20	ENSGT00940000162418.d #19	ENSGT00630000089917.k #16	ENSGT00940000158255.d #15	ENSGT00940000166893.a	ENSGT00390000011559.h	ENSGT00950000182944.D.l #22	ENSGT00940000166158.a.a.b	ENSGT00940000163756.c.a.a	ENSGT01050000244883.A.b	ENSGT01010000223632.b	ENSGT00390000003308.a.b	ENSGT00940000165835.b.e	ENSGT00940000158616.k.a	ENSGT00390000015518	ENSGT00940000155256.d.b.b.a	ENSGT00990000203527.b	ENSGT00990000203527.a.a.a.e.b	ENSGT00390000007227.a.j	ENSGT00390000018560.a.a.a.a.b.j.a	ENSGT00390000018560.a.a.a.a.b.i	ENSGT00940000160991.b.d
Atlantic salmon	MODERN SPECIES	19	EXT1 (ENSSSAG00000077414)	MED30 (ENSSSAG00000077408)	ENSSSAG00000094054	SLC30A8 (ENSSSAG00000097259)	RAD21 (ENSSSAG00000077390)	UTP23 (ENSSSAG00000099529)	ENSSSAG00000099917	ENSSSAG00000076394 #21	ehmt2 (ENSSSAG00000074324) #20	ENSSSAG00000111552 #19	nelfe (ENSSSAG00000074255) #16	ENSSSAG00000090541	skic2 (ENSSSAG00000074121) #15	ENSSSAG00000074101	ENSSSAG00000100949	neu1 (ENSSSAG00000074099) #22	ENSSSAG00000074093	ENSSSAG00000092974	ENSSSAG00000086842	ENSSSAG00000074079	ENSSSAG00000073944	ENSSSAG00000073663	ENSSSAG00000073642	ENSSSAG00000047065	ENSSSAG00000069128	ENSSSAG00000069124	ENSSSAG00000096305	ENSSSAG00000069114	ENSSSAG00000069095	ENSSSAG00000084326	ENSSSAG00000069086
River trout	MODERN SPECIES	27	ENSSTUG00000041546	SAMD12 (ENSSTUG00000041519)	EXT1 (ENSSTUG00000041500)	med30 (ENSSTUG00000041472)	SLC30A8 (ENSSTUG00000041428)	rad21b (ENSSTUG00000041259)	utp23 (ENSSTUG00000041237)	RNF5 (ENSSTUG00000041200)	slc44a4 (ENSSTUG00000039279) #21	ehmt2 (ENSSTUG00000037884) #20	ENSSTUG00000037821 #19	nelfe (ENSSTUG00000037788) #16	skic2 (ENSSTUG00000037168) #15	ENSSTUG00000037121	ENSSTUG00000050401	neu1 (ENSSTUG00000050400) #22	ENSSTUG00000050398	ENSSTUG00000050393	ENSSTUG00000050285	ENSSTUG00000050275	ENSSTUG00000050266	ENSSTUG00000050251	SLC9A3 (ENSSTUG00000050247)	olah (ENSSTUG00000050243)	ago3b (ENSSTUG00000050129)	ENSSTUG00000050117	si:dkey-211g8.7 (ENSSTUG00000050116)	si:dkey-211g8.6 (ENSSTUG00000050114)	naxe (ENSSTUG00000050106)	scn1bb (ENSSTUG00000050099)	scn1bb (ENSSTUG00000050090)
Huchen	MODERN SPECIES	218					SLC30A8 (ENSHHUG00000027808)	rad21b (ENSHHUG00000027805)	utp23 (ENSHHUG00000027801)	ENSHHUG00000027799	slc44a4 (ENSHHUG00000027647) #21	ehmt2 (ENSHHUG00000027335) #20	ENSHHUG00000027322 #19	nelfe (ENSHHUG00000027299) #16	skic2 (ENSHHUG00000026851) #15	ENSHHUG00000026824	ENSHHUG00000026811	neu1 (ENSHHUG00000026803) #22	CSNK2B (ENSHHUG00000026740)	clic1 (ENSHHUG00000026728) #30	ENSHHUG00000026725	ddah2 (ENSHHUG00000026720) #31	rps5 (ENSHHUG00000026524)	ppt2b (ENSHHUG00000026446) #7	ENSHHUG00000026440	nrm (ENSHHUG00000026438)	ENSHHUG00000026435	ENSHHUG00000026427	ENSHHUG00000026422	exosc7 (ENSHHUG00000026405)	zdhhc3b (ENSHHUG00000026395)	TMEM42 (ENSHHUG00000026390)	OSBPL10 (ENSHHUG00000026376)
Northern pike	MODERN SPECIES	9	s100a10a (ENSELUG00000029139)	ENSELUG00000008197	snx27a (ENSELUG00000008184)	chrna11 (ENSELUG00000008156)	ENSELUG00000008074	RPS27 (ENSELUG00000007964)	scamp3 (ENSELUG00000007922)	ENSELUG00000007883	ash1l (ENSELUG00000007838)	ENSELUG00000026674	lrrc71 (ENSELUG00000007788)	crabp2 (ENSELUG00000007739)	mrps21 (ENSELUG00000025966)	FEL (ENSELUG00000007697)	ENSELUG00000032909	neu1 (ENSELUG00000007673) #22	prrc2a (ENSELUG00000001569)	CSNK2B (ENSELUG00000007616)	ENSELUG00000007598	ENSELUG00000030117	ENSELUG00000029130	ENSELUG00000029911	ENSELUG00000027731	ENSELUG00000025843	clic1 (ENSELUG00000007585) #30	ENSELUG00000007567	ddah2 (ENSELUG00000007555) #31	rs5 (ENSELUG00000007427)	ppt2b (ENSELUG00000007295) #7	cratb (ENSELUG00000007268)	ENSELUG00000000263
Otomorpha	ANCESTRAL SPECIES	129	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000165771	ENSGT00980000199469	ENSGT01100000263531.A	ENSGT01060000248670	ENSGT00390000014107.a.b	ENSGT00940000160576 #21	ENSGT00940000180503	ENSGT00940000159459 #20	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.b	ENSGT00510000049347.h	ENSGT00910000144759	ENSGT00910000144740	ENSGT00940000154708 #30	ENSGT00390000002843.b	ENSGT00940000160769 #31	ENSGT00390000010806	ENSGT00940000155779.a.b #7	ENSGT01060000248556.A.a.a.b	ENSGT00940000170244	ENSGT00530000064035.a	ENSGT00390000008146	ENSGT00390000010209.c.a
Clupeiformes	ANCESTRAL SPECIES	219				ENSGT00570000079224.f	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00530000063631.a.k	ENSGT00390000010779.a.b.a	ENSGT00950000182944.D #22	ENSGT00440000035378.c.a	ENSGT00940000154994.b	ENSGT00940000158569	ENSGT00940000154928.c.b	ENSGT01030000234513.A.a.a.a.b.c.a	ENSGT01030000234513.A.a.a.a.a.f	ENSGT00390000004700.a.h	ENSGT00940000158110	ENSGT00940000165764	ENSGT00390000015159.a.a	ENSGT00390000015214	ENSGT00940000158613.k	ENSGT00390000005318.b.b.b.b	ENSGT00390000005131	ENSGT00390000002390.b.f
Denticle herring	MODERN SPECIES	12	tatdn1 (ENSDCDG00000013258)	ndufb9 (ENSDCDG00000013244)	MTSS1 (ENSDCDG00000013094)	SCGN (ENSDCDG00000013013)	ENSDCDG00000006936	ENSDCDG00000005732	ENSDCDG00000031735	ENPP2 (ENSDCDG00000029486)	ENSDCDG00000029411	pard6gb (ENSDCDG00000029408)	bloc1s4 (ENSDCDG00000029407)	nutf2l (ENSDCDG00000029405)	adnp2b (ENSDCDG00000029404)	ENSDCDG00000029402	ENSDCDG00000029401	neu1 (ENSDCDG00000029399) #22	fuca1.2 (ENSDCDG00000029397)	zbtb8b (ENSDCDG00000029396)	heyl (ENSDCDG00000029395)	ENSDCDG00000029394	zgc:91944 (ENSDCDG00000029390)	ENSDCDG00000029388	ENSDCDG00000029383	tmem54b (ENSDCDG00000029370)	hpca (ENSDCDG00000029366)	fam49al (ENSDCDG00000029346)	trit1 (ENSDCDG00000029327)	myclb (ENSDCDG00000029317)	DHRS13 (ENSDCDG00000029314)	mfsd2ab (ENSDCDG00000028662)	glmp (ENSDCDG00000028639)
Atlantic herring	MODERN SPECIES	10	ENSCHAG00000017601	ENSCHAG00000017615	ENSCHAG00000017917	ENSCHAG00000017936	dtnbp1b (ENSCHAG00000017960)	jarid2b (ENSCHAG00000017979)	ENSCHAG00000018450	ENSCHAG00000018452	pard6gb (ENSCHAG00000018474)	bloc1s4 (ENSCHAG00000018499)	nutf2l (ENSCHAG00000018518)	ENSCHAG00000018527 #21	adnp2b (ENSCHAG00000018534)	txnl4a (ENSCHAG00000018540)	txnl4a (ENSCHAG00000018567)	neu1 (ENSCHAG00000018601) #22	zbtb8b (ENSCHAG00000018608)	ENSCHAG00000018637	ENSCHAG00000018653	ENSCHAG00000018662	ENSCHAG00000018669	zgc:91944 (ENSCHAG00000018717)	ENSCHAG00000002461	ENSCHAG00000002489	tmem54b (ENSCHAG00000002544)	hpca (ENSCHAG00000002570)	nt5c1aa (ENSCHAG00000002728)	hpcal4 (ENSCHAG00000002790)	fam49al (ENSCHAG00000002900)	trit1 (ENSCHAG00000004147)	mfsd2ab (ENSCHAG00000004248)
Otophysi	ANCESTRAL SPECIES	95	ENSGT00390000001153	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029	ENSGT00940000164651.a.a.c
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	51	ENSGT00390000001153	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.m #22	ENSGT00950000182944.D.n #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029
Channel catfish	MODERN SPECIES	3	Vars2 (ENSIPUG00000015573)	MGAT1 (ENSIPUG00000015700)	DDX39B (ENSIPUG00000015733)	polr1h (ENSIPUG00000015845)	gtf2h4 (ENSIPUG00000015859)	sh3bp5l (ENSIPUG00000015879)	ENSIPUG00000015916	ENSIPUG00000015929	tnfa (ENSIPUG00000016025)	sacm1la (ENSIPUG00000016062)	nelfe (ENSIPUG00000016138) #16	zbtb12 (ENSIPUG00000016219) #19	skiv2l (ENSIPUG00000016263) #15	ENSIPUG00000016397	tmem268 (ENSIPUG00000016417)	neu1 (ENSIPUG00000016457) #22	neu1 (ENSIPUG00000016511) #22	prrc2a (ENSIPUG00000016528)	csnk2b (ENSIPUG00000016575)	pdia8 (ENSIPUG00000016619)	ENSIPUG00000016655	ENSIPUG00000016661	ints3 (ENSIPUG00000016699)	npr1a (ENSIPUG00000016873)	mylipa (ENSIPUG00000016917)	ENSIPUG00000016954	ENSIPUG00000016973	ENSIPUG00000017062	ENSIPUG00000017109	ENSIPUG00000017142	ENSIPUG00000017158
Characiphysae_b	ANCESTRAL SPECIES	126	ENSGT00390000001153	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.m #22	ENSGT00950000182944.D.n #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029
Electric eel	MODERN SPECIES	340						gtf2h4 (ENSEEEG00000008603)	SH3BP5L (ENSEEEG00000008710)	GABBR1 (ENSEEEG00000008714)	tnfa (ENSEEEG00000008761)	sacm1la (ENSEEEG00000008781)	zbtb12.2 (ENSEEEG00000009000) #19	nelfe (ENSEEEG00000009001) #16	skic2 (ENSEEEG00000009013) #15	PRRT1 (ENSEEEG00000009110) #8	ENSEEEG00000009111	neu1 (ENSEEEG00000009113) #22	neu1 (ENSEEEG00000009118) #22	prrc2a (ENSEEEG00000009124)	csnk2b (ENSEEEG00000009126)	pdia8 (ENSEEEG00000009135)	ints3 (ENSEEEG00000009222)	npr1a (ENSEEEG00000009232)	mylipa (ENSEEEG00000009249)	ENSEEEG00000009251	dtnbp1b (ENSEEEG00000009252)	jarid2b (ENSEEEG00000009253)
Characoidei	ANCESTRAL SPECIES	79	ENSGT00390000001153	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.m #22	ENSGT00950000182944.D.n #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994.c	ENSGT00390000002457.c	ENSGT00390000010029
Red-bellied piranha	MODERN SPECIES	861									pane1 (ENSPNAG00000006721)	zgc:158803 (ENSPNAG00000001926)	zbtb12.2 (ENSPNAG00000001931) #19	nelfe (ENSPNAG00000011802) #16	skic2 (ENSPNAG00000011823) #15	ENSPNAG00000001953	ENSPNAG00000011859	neu1 (ENSPNAG00000011888) #22	neu1 (ENSPNAG00000011900) #22
Mexicana tetra	MODERN SPECIES	15	bloc1s4 (ENSAMXG00000043143)	pard6gb (ENSAMXG00000035492)	ENSAMXG00000030067	jarid2b (ENSAMXG00000011370)	dtnbp1b (ENSAMXG00000042125)	ENSAMXG00000031196	mylipa (ENSAMXG00000036650)	npr1a (ENSAMXG00000011429)	ints3 (ENSAMXG00000011437)	ENSAMXG00000036053	pdia8 (ENSAMXG00000011486)	nelfe (ENSAMXG00000011495) #16	skic2 (ENSAMXG00000011517) #15	ENSAMXG00000035594	ENSAMXG00000011562	neu1 (ENSAMXG00000042543) #22	neu1 (ENSAMXG00000030289) #22	prrc2a (ENSAMXG00000011586)	csnk2b (ENSAMXG00000011597)	zbtb12.2 (ENSAMXG00000011602) #19	sacm1la (ENSAMXG00000011609)	tnfa (ENSAMXG00000011611)	GABBR1 (ENSAMXG00000011615)	SH3BP5L (ENSAMXG00000017912)	gtf2h4 (ENSAMXG00000017868)	polr1h (ENSAMXG00000017854)	ddx39b (ENSAMXG00000017837)	mgat1b (ENSAMXG00000029611)	vars2 (ENSAMXG00000017773)	ppp1r11 (ENSAMXG00000017736)	ENSAMXG00000029531
Characiphysae	ANCESTRAL SPECIES	51	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.m #22	ENSGT00950000182944.D.n #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029	ENSGT00940000164651.a.a.c
Channel catfish	MODERN SPECIES	3	MGAT1 (ENSIPUG00000015700)	DDX39B (ENSIPUG00000015733)	polr1h (ENSIPUG00000015845)	gtf2h4 (ENSIPUG00000015859)	sh3bp5l (ENSIPUG00000015879)	ENSIPUG00000015916	ENSIPUG00000015929	tnfa (ENSIPUG00000016025)	sacm1la (ENSIPUG00000016062)	nelfe (ENSIPUG00000016138) #16	zbtb12 (ENSIPUG00000016219) #19	skiv2l (ENSIPUG00000016263) #15	ENSIPUG00000016397	tmem268 (ENSIPUG00000016417)	neu1 (ENSIPUG00000016457) #22	neu1 (ENSIPUG00000016511) #22	prrc2a (ENSIPUG00000016528)	csnk2b (ENSIPUG00000016575)	pdia8 (ENSIPUG00000016619)	ENSIPUG00000016655	ENSIPUG00000016661	ints3 (ENSIPUG00000016699)	npr1a (ENSIPUG00000016873)	mylipa (ENSIPUG00000016917)	ENSIPUG00000016954	ENSIPUG00000016973	ENSIPUG00000017062	ENSIPUG00000017109	ENSIPUG00000017142	ENSIPUG00000017158	ptp4a3a (ENSIPUG00000017176)
Characiphysae_b	ANCESTRAL SPECIES	126	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.m #22	ENSGT00950000182944.D.n #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029	ENSGT00940000164651.a.a.c
Characoidei	ANCESTRAL SPECIES	79	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418 #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000166893	ENSGT00390000011559	ENSGT00950000182944.D.m #22	ENSGT00950000182944.D.n #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b	ENSGT00390000006790.b	ENSGT00390000001994.c	ENSGT00390000002457.c	ENSGT00390000010029	ENSGT00940000164651.a.a.c
Red-bellied piranha	MODERN SPECIES	861								pane1 (ENSPNAG00000006721)	zgc:158803 (ENSPNAG00000001926)	zbtb12.2 (ENSPNAG00000001931) #19	nelfe (ENSPNAG00000011802) #16	skic2 (ENSPNAG00000011823) #15	ENSPNAG00000001953	ENSPNAG00000011859	neu1 (ENSPNAG00000011888) #22	neu1 (ENSPNAG00000011900) #22
Mexicana tetra	MODERN SPECIES	15	pard6gb (ENSAMXG00000035492)	ENSAMXG00000030067	jarid2b (ENSAMXG00000011370)	dtnbp1b (ENSAMXG00000042125)	ENSAMXG00000031196	mylipa (ENSAMXG00000036650)	npr1a (ENSAMXG00000011429)	ints3 (ENSAMXG00000011437)	ENSAMXG00000036053	pdia8 (ENSAMXG00000011486)	nelfe (ENSAMXG00000011495) #16	skic2 (ENSAMXG00000011517) #15	ENSAMXG00000035594	ENSAMXG00000011562	neu1 (ENSAMXG00000042543) #22	neu1 (ENSAMXG00000030289) #22	prrc2a (ENSAMXG00000011586)	csnk2b (ENSAMXG00000011597)	zbtb12.2 (ENSAMXG00000011602) #19	sacm1la (ENSAMXG00000011609)	tnfa (ENSAMXG00000011611)	GABBR1 (ENSAMXG00000011615)	SH3BP5L (ENSAMXG00000017912)	gtf2h4 (ENSAMXG00000017868)	polr1h (ENSAMXG00000017854)	ddx39b (ENSAMXG00000017837)	mgat1b (ENSAMXG00000029611)	vars2 (ENSAMXG00000017773)	ppp1r11 (ENSAMXG00000017736)	ENSAMXG00000029531	atat1 (ENSAMXG00000030845)
Electric eel	MODERN SPECIES	340					gtf2h4 (ENSEEEG00000008603)	SH3BP5L (ENSEEEG00000008710)	GABBR1 (ENSEEEG00000008714)	tnfa (ENSEEEG00000008761)	sacm1la (ENSEEEG00000008781)	zbtb12.2 (ENSEEEG00000009000) #19	nelfe (ENSEEEG00000009001) #16	skic2 (ENSEEEG00000009013) #15	PRRT1 (ENSEEEG00000009110) #8	ENSEEEG00000009111	neu1 (ENSEEEG00000009113) #22	neu1 (ENSEEEG00000009118) #22	prrc2a (ENSEEEG00000009124)	csnk2b (ENSEEEG00000009126)	pdia8 (ENSEEEG00000009135)	ints3 (ENSEEEG00000009222)	npr1a (ENSEEEG00000009232)	mylipa (ENSEEEG00000009249)	ENSEEEG00000009251	dtnbp1b (ENSEEEG00000009252)	jarid2b (ENSEEEG00000009253)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	15	ENSGT00940000159890	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418.a #19	ENSGT00940000162418.b #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D.o #22	ENSGT00950000182944.D.p #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b.a	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	273	ENSGT00530000063632.B.a.c.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159.m	ENSGT00390000014159.n	ENSGT00390000018500.a.c.h	ENSGT00940000157642.h.j	ENSGT01060000248544.a.b.b.b.a	ENSGT00940000155579.b.f	ENSGT00940000162418.a.b #19	ENSGT00940000162418.b #19	ENSGT00630000089917.i #16	ENSGT00940000158255.b #15	ENSGT00940000162382.n #8	ENSGT00390000011559.c	ENSGT00950000182944.D.o.a #22	ENSGT00950000182944.D.p.b #22	ENSGT00950000183161.a.a.d	ENSGT00390000003781.e.a.n	ENSGT00940000164105.b.e	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.a.a.a.a.a.b	ENSGT00390000014184.j	ENSGT00940000156985.h.j	ENSGT00940000156206.e.a	ENSGT00940000156479.b.c	ENSGT00940000159220.d.a	ENSGT00950000183211.a.b.b.a.a.a	ENSGT00390000006790.b.j	ENSGT00390000001994.e
Cyprininae_a	ANCESTRAL SPECIES	387							ENSGT00390000014159.n	ENSGT00390000018500.a.c.h	ENSGT00940000157642.h.j	ENSGT00940000155579.b.f	ENSGT00940000162418.a.b #19	ENSGT00940000162418.b #19	ENSGT00630000089917.i #16	ENSGT00940000158255.b #15	ENSGT00390000011559.c	ENSGT00950000182944.D.o.a #22	ENSGT00950000182944.D.p.b #22	ENSGT00950000183161.a.a.d	ENSGT00390000003781.e.a.n	ENSGT00940000166438	ENSGT00940000164105.b.e	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.a.a.a.a.a.b	ENSGT00390000014184.j	ENSGT00940000156985.h.j	ENSGT00940000156206.e.a	ENSGT00940000156479.b.c	ENSGT00940000159220.d.a	ENSGT00950000183211.a.b.b.a.b	ENSGT00950000183211.a.b.b.a.a.a	ENSGT00390000006790.b.j	ENSGT00390000001994.e
Common carp reference	MODERN SPECIES	12	ENSCCRG00000064157	ENSCCRG00000044587	ppp1r11 (ENSCCRG00000044591)	vars2 (ENSCCRG00000071995)	mgat1b (ENSCCRG00000042880)	gtf2h4 (ENSCCRG00000042922)	ENSCCRG00000056326	ENSCCRG00000040672	ENSCCRG00000067828	tnfa (ENSCCRG00000040666)	sacm1la (ENSCCRG00000005120)	zbtb12.2 (ENSCCRG00000013639) #19	nelfe (ENSCCRG00000013642) #16	skic2 (ENSCCRG00000013648) #15	ENSCCRG00000009271	neu1 (ENSCCRG00000009275) #22	ENSCCRG00000041421 #22	prrc2a (ENSCCRG00000056887)	csnk2b (ENSCCRG00000074499)	pdia8 (ENSCCRG00000003319)	ENSCCRG00000046022	ENSCCRG00000054375	ints3 (ENSCCRG00000003855)	npr1a (ENSCCRG00000050084)	mylipa (ENSCCRG00000074532)	dtnbp1b (ENSCCRG00000006924)	jarid2b (ENSCCRG00000006920)	ENSCCRG00000067869	pard6gb (ENSCCRG00000056069)	bloc1s4 (ENSCCRG00000054452)	asns (ENSCCRG00000039238)
Golden-line barbel	MODERN SPECIES	57	ENSSGRG00000023060	ENSSGRG00000023061	ENSSGRG00000023066	ppp1r11 (ENSSGRG00000023069)	vars2 (ENSSGRG00000023072)	ddx39b (ENSSGRG00000023076)	gtf2h4 (ENSSGRG00000023326)	SH3BP5L (ENSSGRG00000023335)	ENSSGRG00000023347	sacm1la (ENSSGRG00000024361)	zbtb12.2 (ENSSGRG00000024738) #19	ENSSGRG00000024739 #19	nelfe (ENSSGRG00000024740) #16	ENSSGRG00000024745	PRRT1 (ENSSGRG00000024746) #8	neu1 (ENSSGRG00000024749) #22	ENSSGRG00000024752 #22	prrc2a (ENSSGRG00000024755)	csnk2b (ENSSGRG00000024772)	pdia8 (ENSSGRG00000024826)	ints3 (ENSSGRG00000025103)	ENSSGRG00000025153	mylipa (ENSSGRG00000025154)	ENSSGRG00000025155
Goldfish	MODERN SPECIES	10	ENSCARG00000042999	ppp1r11 (ENSCARG00000042986)	vars2 (ENSCARG00000042590)	mgat1b (ENSCARG00000042520)	polr1h (ENSCARG00000042456)	gtf2h4 (ENSCARG00000042211)	SH3BP5L (ENSCARG00000042099)	GABBR1 (ENSCARG00000038566)	tnfa (ENSCARG00000038434)	sacm1la (ENSCARG00000036414)	zbtb12.2 (ENSCARG00000036368) #19	nelfe (ENSCARG00000036317) #16	skic2 (ENSCARG00000034564) #15	ENSCARG00000034460 #8	ENSCARG00000034449	neu1 (ENSCARG00000034417) #22	NEU1 (ENSCARG00000034327) #22	prrc2a (ENSCARG00000033994)	csnk2b (ENSCARG00000033880)	ENSCARG00000033040	ENSCARG00000033008	ints3 (ENSCARG00000032720)	ENSCARG00000032689	npr1a (ENSCARG00000032180)	mylipa (ENSCARG00000032126)	dtnbp1b (ENSCARG00000032117)	jarid2b (ENSCARG00000031463)	pard6gb (ENSCARG00000031355)	bloc1s4 (ENSCARG00000031319)	asns (ENSCARG00000031261)	tac1 (ENSCARG00000031237)
Cyprininae	ANCESTRAL SPECIES	304							ENSGT00390000018500.a.c.g	ENSGT00940000157642.h.i	ENSGT01060000248544.a.b.b.b.b	ENSGT00940000155579.b.e	ENSGT00940000162418.a.a #19	ENSGT00630000089917.j #16	ENSGT00940000158255.a #15	ENSGT00940000162382.m #8	ENSGT00390000011559.d	ENSGT00950000182944.D.o.b #22	ENSGT00950000182944.D.p.a #22	ENSGT00950000183161.a.a.c	ENSGT00390000003781.e.a.m	ENSGT00940000166438	ENSGT00940000164105.b.f	ENSGT00390000014184.i	ENSGT00940000156985.h.i	ENSGT00940000156206.e.b	ENSGT00940000156479.b.d	ENSGT00940000159220.d.b	ENSGT00950000183211.a.b.b.a.a.b	ENSGT00390000006790.b.i	ENSGT00390000001994.f	ENSGT00390000002457.c	ENSGT00390000010029.k.a
Goldfish	MODERN SPECIES	983	ENSCARG00000050879	ppp1r11 (ENSCARG00000050896)	mgat1b (ENSCARG00000050900)	ddx39b (ENSCARG00000050917)	polr1h (ENSCARG00000051072)	gtf2h4 (ENSCARG00000051135)	SH3BP5L (ENSCARG00000051357)	GABBR1 (ENSCARG00000051615)	tnfa (ENSCARG00000055161)	sacm1la (ENSCARG00000055212)	zbtb12.2 (ENSCARG00000055664) #19	ENSCARG00000055690	skic2 (ENSCARG00000055728) #15	ENSCARG00000055909 #8	ENSCARG00000055928	neu1 (ENSCARG00000055936) #22	NEU1 (ENSCARG00000055964) #22	NEU1 (ENSCARG00000055973) #22	ENSCARG00000055981	ENSCARG00000055993	prrc2a (ENSCARG00000056006)	csnk2b (ENSCARG00000056053)	pdia8 (ENSCARG00000056117)	ENSCARG00000056181	ints3 (ENSCARG00000056316)	npr1a (ENSCARG00000057484)	mylipa (ENSCARG00000058594)	dtnbp1b (ENSCARG00000058635)	jarid2b (ENSCARG00000058671)	pard6gb (ENSCARG00000058732)	bloc1s4 (ENSCARG00000058757)
Cyprininae_a	ANCESTRAL SPECIES	147	ENSGT00940000159890.c	ENSGT00530000063632.B.a.c.b	ENSGT00530000063632.B.a.c.a	ENSGT00940000160110.c	ENSGT00390000008126	ENSGT00390000014159.m	ENSGT00390000018500.a.c.g	ENSGT00940000157642.h.i	ENSGT01060000248544.a.b.b.b.b	ENSGT00940000155579.b.e	ENSGT00940000162418.a.a #19	ENSGT00630000089917.j #16	ENSGT00940000158255.a #15	ENSGT00940000162382.m #8	ENSGT00390000011559.d	ENSGT00950000182944.D.o.b #22	ENSGT00950000182944.D.p.a #22	ENSGT00950000183161.a.a.c	ENSGT00390000003781.e.a.m	ENSGT00940000164105.b.f	ENSGT00390000014184.i	ENSGT00940000156985.h.i	ENSGT00940000156206.e.b	ENSGT00940000156479.b.d	ENSGT00940000159220.d.b	ENSGT00950000183211.a.b.b.a.a.b	ENSGT00390000006790.b.i	ENSGT00390000001994.f	ENSGT00390000010029.k.b	ENSGT00940000164651.a.a.c.a	ENSGT00940000165423.b
Golden-line barbel	MODERN SPECIES	3771																neu1 (ENSSGRG00000005853) #22
Common carp reference	MODERN SPECIES	31	CFAP90 (ENSCCRG00000069317)	ENSCCRG00000044529	atat1 (ENSCCRG00000044562)	ppp1r11 (ENSCCRG00000055468)	mgat1b (ENSCCRG00000076869)	ddx39b (ENSCCRG00000042890)	polr1h (ENSCCRG00000007162)	ENSCCRG00000064855	ENSCCRG00000007182	tnfa (ENSCCRG00000038973)	sacm1la (ENSCCRG00000053168)	zbtb12.2 (ENSCCRG00000060675) #19	skic2 (ENSCCRG00000011803) #15	ENSCCRG00000011810	ENSCCRG00000011808 #8	neu1 (ENSCCRG00000011776) #22	ENSCCRG00000056124	prrc2a (ENSCCRG00000077516)	csnk2b (ENSCCRG00000036079)	ENSCCRG00000003202	ints3 (ENSCCRG00000002797)	npr1a (ENSCCRG00000038385)	ENSCCRG00000064029	mylipa (ENSCCRG00000012480)	dtnbp1b (ENSCCRG00000011037)	jarid2b (ENSCCRG00000011039)	pard6gb (ENSCCRG00000072354)	bloc1s4 (ENSCCRG00000062706)	asns (ENSCCRG00000065194)	sdhaf3 (ENSCCRG00000074655)	c1galt1a (ENSCCRG00000081575)
Zebrafish	MODERN SPECIES	10	vars2 (ENSDARG00000056717)	mgat1b (ENSDARG00000036065)	ddx39b (ENSDARG00000036069)	polr1h (ENSDARG00000036070)	gtf2h4 (ENSDARG00000036071)	SH3BP5L (ENSDARG00000007136)	ENSDARG00000016667	tnfa (ENSDARG00000009511)	sacm1la (ENSDARG00000015290)	zbtb12.2 (ENSDARG00000070658) #19	ENSDARG00000103949 #19	nelfe (ENSDARG00000004343) #16	skic2 (ENSDARG00000062206) #15	ENSDARG00000062208	ENSDARG00000087611	neu1 (ENSDARG00000008832) #22	prrc2a (ENSDARG00000031494)	csnk2b (ENSDARG00000077776)	pdia8 (ENSDARG00000033599)	ENSDARG00000056847	ints3 (ENSDARG00000016811)	npr1a (ENSDARG00000031751)	mylipa (ENSDARG00000008859)	dtnbp1b (ENSDARG00000055206)	jarid2b (ENSDARG00000062268)	pard6gb (ENSDARG00000036090)	bloc1s4 (ENSDARG00000007597)	asns (ENSDARG00000016375)	tac1 (ENSDARG00000014490)	sdhaf3 (ENSDARG00000036092)	c1galt1a (ENSDARG00000062278)
Cyprinoidei	ANCESTRAL SPECIES	15	ENSGT00530000063632.B.a	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159	ENSGT00390000018500.a.c	ENSGT00940000157642.h	ENSGT01060000248544.a.b.b.b	ENSGT00940000155579.b	ENSGT00940000162418.a #19	ENSGT00940000162418.b #19	ENSGT00630000089917 #16	ENSGT00940000158255 #15	ENSGT00940000162382 #8	ENSGT00390000011559	ENSGT00950000182944.D.o #22	ENSGT00950000182944.D.p #22	ENSGT00950000183161.a.a	ENSGT00390000003781.e.a	ENSGT00940000166438	ENSGT00940000164105.b	ENSGT00390000014184	ENSGT00940000156985.h	ENSGT00940000156206.e	ENSGT00940000156479.b	ENSGT00940000159220.d	ENSGT00950000183211.a.b.b.a	ENSGT00390000006790.b	ENSGT00390000001994	ENSGT00390000002457.c	ENSGT00390000010029	ENSGT00940000164651.a.a.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	304						ENSGT00390000018500.a.c.g	ENSGT00940000157642.h.i	ENSGT01060000248544.a.b.b.b.b	ENSGT00940000155579.b.e	ENSGT00940000162418.a.a #19	ENSGT00630000089917.j #16	ENSGT00940000158255.a #15	ENSGT00940000162382.m #8	ENSGT00390000011559.d	ENSGT00950000182944.D.o.b #22	ENSGT00950000182944.D.p.a #22	ENSGT00950000183161.a.a.c	ENSGT00390000003781.e.a.m	ENSGT00940000166438	ENSGT00940000164105.b.f	ENSGT00390000014184.i	ENSGT00940000156985.h.i	ENSGT00940000156206.e.b	ENSGT00940000156479.b.d	ENSGT00940000159220.d.b	ENSGT00950000183211.a.b.b.a.a.b	ENSGT00390000006790.b.i	ENSGT00390000001994.f	ENSGT00390000002457.c	ENSGT00390000010029.k.a	ENSGT00940000164651.a.a.c.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	983	ppp1r11 (ENSCARG00000050896)	mgat1b (ENSCARG00000050900)	ddx39b (ENSCARG00000050917)	polr1h (ENSCARG00000051072)	gtf2h4 (ENSCARG00000051135)	SH3BP5L (ENSCARG00000051357)	GABBR1 (ENSCARG00000051615)	tnfa (ENSCARG00000055161)	sacm1la (ENSCARG00000055212)	zbtb12.2 (ENSCARG00000055664) #19	ENSCARG00000055690	skic2 (ENSCARG00000055728) #15	ENSCARG00000055909 #8	ENSCARG00000055928	neu1 (ENSCARG00000055936) #22	NEU1 (ENSCARG00000055964) #22	NEU1 (ENSCARG00000055973) #22	ENSCARG00000055981	ENSCARG00000055993	prrc2a (ENSCARG00000056006)	csnk2b (ENSCARG00000056053)	pdia8 (ENSCARG00000056117)	ENSCARG00000056181	ints3 (ENSCARG00000056316)	npr1a (ENSCARG00000057484)	mylipa (ENSCARG00000058594)	dtnbp1b (ENSCARG00000058635)	jarid2b (ENSCARG00000058671)	pard6gb (ENSCARG00000058732)	bloc1s4 (ENSCARG00000058757)	asns (ENSCARG00000058813)
Goldfish	MODERN SPECIES	983	mgat1b (ENSCARG00000050900)	ddx39b (ENSCARG00000050917)	polr1h (ENSCARG00000051072)	gtf2h4 (ENSCARG00000051135)	SH3BP5L (ENSCARG00000051357)	GABBR1 (ENSCARG00000051615)	tnfa (ENSCARG00000055161)	sacm1la (ENSCARG00000055212)	zbtb12.2 (ENSCARG00000055664) #19	ENSCARG00000055690	skic2 (ENSCARG00000055728) #15	ENSCARG00000055909 #8	ENSCARG00000055928	neu1 (ENSCARG00000055936) #22	NEU1 (ENSCARG00000055964) #22	NEU1 (ENSCARG00000055973) #22	ENSCARG00000055981	ENSCARG00000055993	prrc2a (ENSCARG00000056006)	csnk2b (ENSCARG00000056053)	pdia8 (ENSCARG00000056117)	ENSCARG00000056181	ints3 (ENSCARG00000056316)	npr1a (ENSCARG00000057484)	mylipa (ENSCARG00000058594)	dtnbp1b (ENSCARG00000058635)	jarid2b (ENSCARG00000058671)	pard6gb (ENSCARG00000058732)	bloc1s4 (ENSCARG00000058757)	asns (ENSCARG00000058813)	tac1 (ENSCARG00000030384)
Cyprininae_a	ANCESTRAL SPECIES	147	ENSGT00530000063632.B.a.c.b	ENSGT00530000063632.B.a.c.a	ENSGT00940000160110.c	ENSGT00390000008126	ENSGT00390000014159.m	ENSGT00390000018500.a.c.g	ENSGT00940000157642.h.i	ENSGT01060000248544.a.b.b.b.b	ENSGT00940000155579.b.e	ENSGT00940000162418.a.a #19	ENSGT00630000089917.j #16	ENSGT00940000158255.a #15	ENSGT00940000162382.m #8	ENSGT00390000011559.d	ENSGT00950000182944.D.o.b #22	ENSGT00950000182944.D.p.a #22	ENSGT00950000183161.a.a.c	ENSGT00390000003781.e.a.m	ENSGT00940000164105.b.f	ENSGT00390000014184.i	ENSGT00940000156985.h.i	ENSGT00940000156206.e.b	ENSGT00940000156479.b.d	ENSGT00940000159220.d.b	ENSGT00950000183211.a.b.b.a.a.b	ENSGT00390000006790.b.i	ENSGT00390000001994.f	ENSGT00390000010029.k.b	ENSGT00940000164651.a.a.c.a	ENSGT00940000165423.b	ENSGT00390000002457.c
Golden-line barbel	MODERN SPECIES	204	ppp1r11 (ENSSGRG00000014817)	vars2 (ENSSGRG00000014772)	mgat1b (ENSSGRG00000014769)	polr1h (ENSSGRG00000014768)	ddx39b (ENSSGRG00000014740)	gtf2h4 (ENSSGRG00000014738)	SH3BP5L (ENSSGRG00000014737)	ENSSGRG00000014054	tnfa (ENSSGRG00000014041)	sacm1la (ENSSGRG00000013957)	zbtb12.2 (ENSSGRG00000013952) #19	nelfe (ENSSGRG00000013912) #16	skic2 (ENSSGRG00000013780) #15	ENSSGRG00000013777 #8	ENSSGRG00000013776	ENSSGRG00000013772 #22	prrc2a (ENSSGRG00000013725)	csnk2b (ENSSGRG00000013710)	ENSSGRG00000013707	ints3 (ENSSGRG00000013661)	npr1a (ENSSGRG00000012299)	mylipa (ENSSGRG00000012288)
Cyprininae	ANCESTRAL SPECIES	273	ENSGT00940000160110	ENSGT00390000008126	ENSGT00390000014159.m	ENSGT00390000014159.n	ENSGT00390000018500.a.c.h	ENSGT00940000157642.h.j	ENSGT01060000248544.a.b.b.b.a	ENSGT00940000155579.b.f	ENSGT00940000162418.a.b #19	ENSGT00940000162418.b #19	ENSGT00630000089917.i #16	ENSGT00940000158255.b #15	ENSGT00940000162382.n #8	ENSGT00390000011559.c	ENSGT00950000182944.D.o.a #22	ENSGT00950000182944.D.p.b #22	ENSGT00950000183161.a.a.d	ENSGT00390000003781.e.a.n	ENSGT00940000164105.b.e	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.a.a.a.a.a.b	ENSGT00390000014184.j	ENSGT00940000156985.h.j	ENSGT00940000156206.e.a	ENSGT00940000156479.b.c	ENSGT00940000159220.d.a	ENSGT00950000183211.a.b.b.a.a.a	ENSGT00390000006790.b.j	ENSGT00390000001994.e
Goldfish	MODERN SPECIES	10	ppp1r11 (ENSCARG00000042986)	vars2 (ENSCARG00000042590)	mgat1b (ENSCARG00000042520)	polr1h (ENSCARG00000042456)	gtf2h4 (ENSCARG00000042211)	SH3BP5L (ENSCARG00000042099)	GABBR1 (ENSCARG00000038566)	tnfa (ENSCARG00000038434)	sacm1la (ENSCARG00000036414)	zbtb12.2 (ENSCARG00000036368) #19	nelfe (ENSCARG00000036317) #16	skic2 (ENSCARG00000034564) #15	ENSCARG00000034460 #8	ENSCARG00000034449	neu1 (ENSCARG00000034417) #22	NEU1 (ENSCARG00000034327) #22	prrc2a (ENSCARG00000033994)	csnk2b (ENSCARG00000033880)	ENSCARG00000033040	ENSCARG00000033008	ints3 (ENSCARG00000032720)	ENSCARG00000032689	npr1a (ENSCARG00000032180)	mylipa (ENSCARG00000032126)	dtnbp1b (ENSCARG00000032117)	jarid2b (ENSCARG00000031463)	pard6gb (ENSCARG00000031355)	bloc1s4 (ENSCARG00000031319)	asns (ENSCARG00000031261)	tac1 (ENSCARG00000031237)	sdhaf3 (ENSCARG00000031223)
Cyprininae_a	ANCESTRAL SPECIES	387						ENSGT00390000014159.n	ENSGT00390000018500.a.c.h	ENSGT00940000157642.h.j	ENSGT00940000155579.b.f	ENSGT00940000162418.a.b #19	ENSGT00940000162418.b #19	ENSGT00630000089917.i #16	ENSGT00940000158255.b #15	ENSGT00390000011559.c	ENSGT00950000182944.D.o.a #22	ENSGT00950000182944.D.p.b #22	ENSGT00950000183161.a.a.d	ENSGT00390000003781.e.a.n	ENSGT00940000166438	ENSGT00940000164105.b.e	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.a.a.a.a.a.b	ENSGT00390000014184.j	ENSGT00940000156985.h.j	ENSGT00940000156206.e.a	ENSGT00940000156479.b.c	ENSGT00940000159220.d.a	ENSGT00950000183211.a.b.b.a.b	ENSGT00950000183211.a.b.b.a.a.a	ENSGT00390000006790.b.j	ENSGT00390000001994.e
Common carp reference	MODERN SPECIES	12	ENSCCRG00000044587	ppp1r11 (ENSCCRG00000044591)	vars2 (ENSCCRG00000071995)	mgat1b (ENSCCRG00000042880)	gtf2h4 (ENSCCRG00000042922)	ENSCCRG00000056326	ENSCCRG00000040672	ENSCCRG00000067828	tnfa (ENSCCRG00000040666)	sacm1la (ENSCCRG00000005120)	zbtb12.2 (ENSCCRG00000013639) #19	nelfe (ENSCCRG00000013642) #16	skic2 (ENSCCRG00000013648) #15	ENSCCRG00000009271	neu1 (ENSCCRG00000009275) #22	ENSCCRG00000041421 #22	prrc2a (ENSCCRG00000056887)	csnk2b (ENSCCRG00000074499)	pdia8 (ENSCCRG00000003319)	ENSCCRG00000046022	ENSCCRG00000054375	ints3 (ENSCCRG00000003855)	npr1a (ENSCCRG00000050084)	mylipa (ENSCCRG00000074532)	dtnbp1b (ENSCCRG00000006924)	jarid2b (ENSCCRG00000006920)	ENSCCRG00000067869	pard6gb (ENSCCRG00000056069)	bloc1s4 (ENSCCRG00000054452)	asns (ENSCCRG00000039238)	tac1 (ENSCCRG00000039211)
Golden-line barbel	MODERN SPECIES	57	ENSSGRG00000023061	ENSSGRG00000023066	ppp1r11 (ENSSGRG00000023069)	vars2 (ENSSGRG00000023072)	ddx39b (ENSSGRG00000023076)	gtf2h4 (ENSSGRG00000023326)	SH3BP5L (ENSSGRG00000023335)	ENSSGRG00000023347	sacm1la (ENSSGRG00000024361)	zbtb12.2 (ENSSGRG00000024738) #19	ENSSGRG00000024739 #19	nelfe (ENSSGRG00000024740) #16	ENSSGRG00000024745	PRRT1 (ENSSGRG00000024746) #8	neu1 (ENSSGRG00000024749) #22	ENSSGRG00000024752 #22	prrc2a (ENSSGRG00000024755)	csnk2b (ENSSGRG00000024772)	pdia8 (ENSSGRG00000024826)	ints3 (ENSSGRG00000025103)	ENSSGRG00000025153	mylipa (ENSSGRG00000025154)	ENSSGRG00000025155
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	358															ENSLOCG00000000637	ENSLOCG00000000666 #22
Spotted gar	MODERN SPECIES	675	tmx2b (ENSLOCG00000008046)	med19a (ENSLOCG00000008028)	slc43a1b (ENSLOCG00000008020)	rtn4rl2b (ENSLOCG00000008003)	slc43a3a (ENSLOCG00000007982)	ENSLOCG00000007975	cabp2a (ENSLOCG00000007961)	ENSLOCG00000007942	ENSLOCG00000007932	timm10 (ENSLOCG00000007919)	unc93b1 (ENSLOCG00000007905)	cryba1l2 (ENSLOCG00000007888)	crybb1l2 (ENSLOCG00000007867)	mpeg1.2 (ENSLOCG00000007854)	ENSLOCG00000007834	NEU1 (ENSLOCG00000007818) #22	ENSLOCG00000018122	tmem17 (ENSLOCG00000007806)	ENSLOCG00000007794	THNSL1 (ENSLOCG00000018121)	GPR158 (ENSLOCG00000007776)	ENSLOCG00000007759	myo3a (ENSLOCG00000007720)	gad2 (ENSLOCG00000007705)	ENSLOCG00000007691	apbb1ip (ENSLOCG00000007664)	pdss1 (ENSLOCG00000007637)	abi1a (ENSLOCG00000007606)	acbd5a (ENSLOCG00000007590)	mastl (ENSLOCG00000007561)	YME1L1 (ENSLOCG00000007535)
Reedfish	MODERN SPECIES		ENSECRG00000000349	vars1 (ENSECRG00000000350) #26	ENSECRG00000000351	ENSECRG00000000352	ENSECRG00000000353	ENSECRG00000000354	ENSECRG00000000355	ptges (ENSECRG00000000356)	ENSECRG00000000357	bag6l (ENSECRG00000000358)	ENSECRG00000000359	ENSECRG00000000360	ENSECRG00000000361	ENSECRG00000000362	ENSECRG00000000363	neu1 (ENSECRG00000000364) #22	ATP6V1G2 (ENSECRG00000000365)	ENSECRG00000000366	ENSECRG00000000367	GABBR1 (ENSECRG00000000368)	ENSECRG00000000369	ilrun (ENSECRG00000000370)	sh3bp5la (ENSECRG00000000371)	gtf2h4 (ENSECRG00000000372)	ppp1r11 (ENSECRG00000000373)	polr1h (ENSECRG00000000374)	ENSECRG00000000375	vars2 (ENSECRG00000000376)	mgat1b (ENSECRG00000000377)	ENSECRG00000000378	ENSECRG00000000379