Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D
Glires	ANCESTRAL SPECIES	10	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT00950000185117 #30	ENSGT00940000166733	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT00950000185117 #30	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b	ENSGT01040000240444.A.a.a.a.b
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000162668	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00940000163888	ENSGT00390000003732	ENSGT00940000163848	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000155271	ENSGT00390000013236	ENSGT00940000160536	ENSGT00390000018596.A.b	ENSGT00940000159977	ENSGT00940000159566
Upper Galilee mountains blind mole rat	MODERN SPECIES	503					ENSNGAG00000021206 #11	Klhl4 (ENSNGAG00000023295) #12	Dach2 (ENSNGAG00000023673) #13	Chm (ENSNGAG00000011917) #14	Pof1b (ENSNGAG00000024266) #15	Zfp711 (ENSNGAG00000015585) #16	Apool (ENSNGAG00000023555) #17	4933403O08Rik (ENSNGAG00000001929) #18	ENSNGAG00000007069 #19	ENSNGAG00000020473 #20	Hdx (ENSNGAG00000022021) #21	Rps6ka6 (ENSNGAG00000013321) #22	Pou3f4 (ENSNGAG00000013024) #23	ENSNGAG00000018747 #24	ENSNGAG00000023856 #25	Sh3bgrl (ENSNGAG00000008553) #26	ENSNGAG00000018332 #27	ENSNGAG00000021355 #28	Brwd3 (ENSNGAG00000021381) #29	ENSNGAG00000024238 #30	Chmp1b2 (ENSNGAG00000023090) #31	Tbx22 (ENSNGAG00000023862) #32	ENSNGAG00000014283 #33
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000162668	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00940000163888	ENSGT00390000003732	ENSGT00940000163848	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00900000141059.y.a.a	ENSGT00900000141059.y.b	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a
Cricetidae_B	ANCESTRAL SPECIES	47	ENSGT00940000158335	ENSGT00940000162668	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a
Prairie vole	MODERN SPECIES	96	ENSMOCG00000014742	Klhl4 (ENSMOCG00000008772) #12	Dach2 (ENSMOCG00000011776) #13	Chm (ENSMOCG00000020359) #14	ENSMOCG00000015094	ENSMOCG00000000578	Pof1b (ENSMOCG00000014928) #15	Zfp711 (ENSMOCG00000003046) #16	2010106E10Rik (ENSMOCG00000017647)	Satl1 (ENSMOCG00000003777)	Apool (ENSMOCG00000019380) #17	4933403O08Rik (ENSMOCG00000010080) #18	Tex16 (ENSMOCG00000016239) #19	ENSMOCG00000012225 #20	Hdx (ENSMOCG00000016956) #21	Rps6ka6 (ENSMOCG00000000070) #22	Cylc1 (ENSMOCG00000002144)	Pou3f4 (ENSMOCG00000001063) #23	ENSMOCG00000001887	Sh3bgrl (ENSMOCG00000002612) #26	ENSMOCG00000001614	Brwd3 (ENSMOCG00000018113) #29	ENSMOCG00000004335	Chmp1b2 (ENSMOCG00000010933) #31	Tbx22 (ENSMOCG00000001712) #32	Itm2a (ENSMOCG00000020928)	Gpr174 (ENSMOCG00000022431)
Northern American deer mouse	MODERN SPECIES	475	Cpxcr1 (ENSPEMG00000026829)	ENSPEMG00000029835	Klhl4 (ENSPEMG00000019669) #12	Gm773 (ENSPEMG00000019841)	Dach2 (ENSPEMG00000011157) #13	ENSPEMG00000025540	Chm (ENSPEMG00000019556) #14	Pof1b (ENSPEMG00000023660) #15	Zfp711 (ENSPEMG00000028793) #16	2010106E10Rik (ENSPEMG00000015852)	ENSPEMG00000026639	Apool (ENSPEMG00000024018) #17	ENSPEMG00000022787	4933403O08Rik (ENSPEMG00000025473) #18	Hdx (ENSPEMG00000011250) #21	Rps6ka6 (ENSPEMG00000015736) #22	Cylc1 (ENSPEMG00000017301)	Pou3f4 (ENSPEMG00000003663) #23	ENSPEMG00000025843	Gm6377 (ENSPEMG00000023246)	ENSPEMG00000024318	Sh3bgrl (ENSPEMG00000027781) #26	Brwd3 (ENSPEMG00000022305) #29	ENSPEMG00000031328	Wmp (ENSPEMG00000027638)	Tent5d (ENSPEMG00000031184)	Chmp1b2 (ENSPEMG00000022335) #31	Tbx22 (ENSPEMG00000023383) #32	Itm2a (ENSPEMG00000023946)	Gpr174 (ENSPEMG00000005742)	ENSPEMG00000004229
Cricetinae	ANCESTRAL SPECIES	17				ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00940000163888	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT01030000235438	ENSGT00940000161429 #23	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b
Golden Hamster	MODERN SPECIES	758	Klhl4 (ENSMAUG00000014371) #12	ENSMAUG00000016494	Dach2 (ENSMAUG00000010782) #13	Chm (ENSMAUG00000017065) #14	ENSMAUG00000016526	Pof1b (ENSMAUG00000012853) #15	Zfp711 (ENSMAUG00000012277) #16	2010106E10Rik (ENSMAUG00000012995)	Satl1 (ENSMAUG00000016111)	Apool (ENSMAUG00000014048) #17	4933403O08Rik (ENSMAUG00000009376) #18	ENSMAUG00000016626	Tex16 (ENSMAUG00000006556) #19	ENSMAUG00000018096 #20	Hdx (ENSMAUG00000000922) #21	Rps6ka6 (ENSMAUG00000001357) #22	ENSMAUG00000007023	Pou3f4 (ENSMAUG00000016709) #23	ENSMAUG00000010933	ENSMAUG00000008750	Sh3bgrl (ENSMAUG00000000433) #26	Brwd3 (ENSMAUG00000012244) #29	ENSMAUG00000011241	ENSMAUG00000013651	Wmp (ENSMAUG00000016661)	Chmp1b2 (ENSMAUG00000011550) #31
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001004881	Klhl4 (ENSCGRG00001016767) #12	ENSCGRG00001006882	Dach2 (ENSCGRG00001023530) #13	Tpm3-rs7 (ENSCGRG00001006979)	Chm (ENSCGRG00001006793) #14	Pof1b (ENSCGRG00001015632) #15	Zfp711 (ENSCGRG00001010150) #16	2010106E10Rik (ENSCGRG00001018464)	ENSCGRG00001000138	ENSCGRG00001000206 #17	4933403O08Rik (ENSCGRG00001018687) #18	ENSCGRG00001007339	Tex16 (ENSCGRG00001020189) #19	Hdx (ENSCGRG00001001736) #21	Rps6ka6 (ENSCGRG00001019587) #22	Cylc1 (ENSCGRG00001014177)	ENSCGRG00001016928	Pou3f4 (ENSCGRG00001011962) #23	ENSCGRG00001024450	Gm6377 (ENSCGRG00001012169)	ENSCGRG00001011016	Sh3bgrl (ENSCGRG00001000603) #26	Hmgn5 (ENSCGRG00001013973)	Brwd3 (ENSCGRG00001016099) #29	ENSCGRG00001004740	Wmp (ENSCGRG00001017986)	Tent5d (ENSCGRG00001012351)	Chmp1b2 (ENSCGRG00001005877) #31	Tbx22 (ENSCGRG00001019725) #32	ENSCGRG00001000247
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00940000163888	ENSGT00390000003732	ENSGT00940000163848	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D
Mus	ANCESTRAL SPECIES	9	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000163020	ENSGT00940000162668	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000163888.e	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000163848	ENSGT00940000163020.o	ENSGT00390000003732	ENSGT00940000163888.e	ENSGT00940000163888.f	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a
Mus_C	ANCESTRAL SPECIES	22	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163020.o	ENSGT00940000163888.e	ENSGT00940000163888.f	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000182962.b.b.a	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a
spretus	MODERN SPECIES	19	Cpxcr1 (MGP_SPRETEiJ_G0034531)	MGP_SPRETEiJ_G0034530	Ube2dnl2 (MGP_SPRETEiJ_G0034529)	Ube2dnl1 (MGP_SPRETEiJ_G0034528)	Klhl4 (MGP_SPRETEiJ_G0034527) #12	Dach2 (MGP_SPRETEiJ_G0034526) #13	Chm (MGP_SPRETEiJ_G0034525) #14	Pof1b (MGP_SPRETEiJ_G0034524) #15	Zfp711 (MGP_SPRETEiJ_G0034523) #16	2010106E10Rik (MGP_SPRETEiJ_G0034522)	Satl1 (MGP_SPRETEiJ_G0034521)	Apool (MGP_SPRETEiJ_G0034520) #17	4933403O08Rik (MGP_SPRETEiJ_G0034519) #18	Hdx (MGP_SPRETEiJ_G0034517) #21	MGP_SPRETEiJ_G0034516	Rps6ka6 (MGP_SPRETEiJ_G0034515) #22	MGP_SPRETEiJ_G0034514	Cylc1 (MGP_SPRETEiJ_G0034513)	Pou3f4 (MGP_SPRETEiJ_G0034512) #23	Gm6377 (MGP_SPRETEiJ_G0034511)	Sh3bgrl (MGP_SPRETEiJ_G0034510) #26	MGP_SPRETEiJ_G0034509	MGP_SPRETEiJ_G0034508 #29	MGP_SPRETEiJ_G0034507	MGP_SPRETEiJ_G0034506	Tent5d (MGP_SPRETEiJ_G0034505)	Chmp1b2 (MGP_SPRETEiJ_G0034504) #31	Tbx22 (MGP_SPRETEiJ_G0034503) #32	Itm2a (MGP_SPRETEiJ_G0034502)	Gpr174 (MGP_SPRETEiJ_G0034501)	P2ry10b (MGP_SPRETEiJ_G0034500)
Steppe mouse	MODERN SPECIES	1817																Rps6ka6 (ENSMSIG00000028049) #22
Mouse	MODERN SPECIES	37	Cpxcr1 (ENSMUSG00000072995)	Ube2dnl2 (ENSMUSG00000047079)	Ube2dnl1 (ENSMUSG00000050435)	Klhl4 (ENSMUSG00000025597) #12	Dach2 (ENSMUSG00000025592) #13	Chm (ENSMUSG00000025531) #14	Pof1b (ENSMUSG00000034607) #15	Zfp711 (ENSMUSG00000025529) #16	2010106E10Rik (ENSMUSG00000025528)	Satl1 (ENSMUSG00000025527)	Apool (ENSMUSG00000025525) #17	4933403O08Rik (ENSMUSG00000079460) #18	Tex16 (ENSMUSG00000034555) #19	Gm45194 (ENSMUSG00000109156)	Hdx (ENSMUSG00000034551) #21	Rps6ka6 (ENSMUSG00000025665) #22	Cylc1 (ENSMUSG00000073001)	Pou3f4 (ENSMUSG00000056854) #23	Gm6377 (ENSMUSG00000048621)	Sh3bgrl (ENSMUSG00000031246) #26	Hmgn5 (ENSMUSG00000031245)	Brwd3 (ENSMUSG00000063663) #29	Wmp (ENSMUSG00000073006)	Tent5d (ENSMUSG00000073007)	Chmp1b2 (ENSMUSG00000031242) #31	Tbx22 (ENSMUSG00000031241) #32	Itm2a (ENSMUSG00000031239)	Gpr174 (ENSMUSG00000073008)	P2ry10b (ENSMUSG00000054293)	P2ry10 (ENSMUSG00000050921)	Lpar4 (ENSMUSG00000049929)
Ryukyu mouse	MODERN SPECIES	19	MGP_CAROLIEiJ_G0033365	Cpxcr1 (MGP_CAROLIEiJ_G0033364)	MGP_CAROLIEiJ_G0033363	MGP_CAROLIEiJ_G0033362	Klhl4 (MGP_CAROLIEiJ_G0033361) #12	Dach2 (MGP_CAROLIEiJ_G0033360) #13	Chm (MGP_CAROLIEiJ_G0033359) #14	Pof1b (MGP_CAROLIEiJ_G0033358) #15	Zfp711 (MGP_CAROLIEiJ_G0033357) #16	2010106E10Rik (MGP_CAROLIEiJ_G0033356)	Satl1 (MGP_CAROLIEiJ_G0033355)	Apool (MGP_CAROLIEiJ_G0033354) #17	4933403O08Rik (MGP_CAROLIEiJ_G0033353) #18	MGP_CAROLIEiJ_G0033352 #19	Hdx (MGP_CAROLIEiJ_G0033351) #21	Rps6ka6 (MGP_CAROLIEiJ_G0033350) #22	Cylc1 (MGP_CAROLIEiJ_G0033349)	Pou3f4 (MGP_CAROLIEiJ_G0033348) #23	Gm6377 (MGP_CAROLIEiJ_G0033347)	Sh3bgrl (MGP_CAROLIEiJ_G0033346) #26	MGP_CAROLIEiJ_G0033345	Brwd3 (MGP_CAROLIEiJ_G0033344) #29	MGP_CAROLIEiJ_G0033343	Wmp (MGP_CAROLIEiJ_G0033342)	Tent5d (MGP_CAROLIEiJ_G0033341)	Chmp1b2 (MGP_CAROLIEiJ_G0033340) #31	Tbx22 (MGP_CAROLIEiJ_G0033339) #32	Itm2a (MGP_CAROLIEiJ_G0033338)	Gpr174 (MGP_CAROLIEiJ_G0033337)	P2ry10b (MGP_CAROLIEiJ_G0033336)	P2ry10 (MGP_CAROLIEiJ_G0033335)
Shrew mouse	MODERN SPECIES	23	MGP_PahariEiJ_G0031905	MGP_PahariEiJ_G0031904	MGP_PahariEiJ_G0031903	MGP_PahariEiJ_G0031902	Klhl4 (MGP_PahariEiJ_G0031901) #12	Dach2 (MGP_PahariEiJ_G0031900) #13	Chm (MGP_PahariEiJ_G0031899) #14	Pof1b (MGP_PahariEiJ_G0031898) #15	Zfp711 (MGP_PahariEiJ_G0031897) #16	2010106E10Rik (MGP_PahariEiJ_G0031896)	Satl1 (MGP_PahariEiJ_G0031895)	Apool (MGP_PahariEiJ_G0031894) #17	4933403O08Rik (MGP_PahariEiJ_G0031893) #18	MGP_PahariEiJ_G0031892 #19	Hdx (MGP_PahariEiJ_G0031891) #21	Rps6ka6 (MGP_PahariEiJ_G0031890) #22	MGP_PahariEiJ_G0031889	Pou3f4 (MGP_PahariEiJ_G0031888) #23	MGP_PahariEiJ_G0031887	MGP_PahariEiJ_G0031885	MGP_PahariEiJ_G0031886	MGP_PahariEiJ_G0031884	Gm6377 (MGP_PahariEiJ_G0031883)	Sh3bgrl (MGP_PahariEiJ_G0031882) #26	Hmgn5 (MGP_PahariEiJ_G0031881)	Brwd3 (MGP_PahariEiJ_G0031880) #29	MGP_PahariEiJ_G0031879	Wmp (MGP_PahariEiJ_G0031878)	Tent5d (MGP_PahariEiJ_G0031877)	Chmp1b2 (MGP_PahariEiJ_G0031876) #31	Tbx22 (MGP_PahariEiJ_G0031875) #32
Rat	MODERN SPECIES	46	LOC120099227 (ENSRNOG00000029497)	RGD1561582 (ENSRNOG00000065209)	Klhl4 (ENSRNOG00000005215) #12	Dach2 (ENSRNOG00000004869) #13	Chm (ENSRNOG00000000161) #14	ENSRNOG00000064035	Pof1b (ENSRNOG00000004795) #15	Zfp711 (ENSRNOG00000022391) #16	RGD1561958 (ENSRNOG00000022411)	Satl1 (ENSRNOG00000022476)	Apool (ENSRNOG00000004512) #17	4933403O08Rik (ENSRNOG00000042394) #18	Ube2d4l1 (ENSRNOG00000065297)	LOC100363993 (ENSRNOG00000067650) #19	Hdx (ENSRNOG00000037799) #21	Rps6ka6 (ENSRNOG00000002592) #22	Cylc1 (ENSRNOG00000056740)	Ankra2 (ENSRNOG00000016622)	Pou3f4 (ENSRNOG00000002784) #23	LOC102554937 (ENSRNOG00000068802)	LOC681325 (ENSRNOG00000023005)	RGD1562039 (ENSRNOG00000030519)	Sh3bgrl (ENSRNOG00000069303) #26	Hmgn5 (ENSRNOG00000029078)	Brwd3 (ENSRNOG00000002291) #29	LOC103690878 (ENSRNOG00000031283)	RGD1562871 (ENSRNOG00000033458)	Rfk-ps1 (ENSRNOG00000066048)	RGD1561552 (ENSRNOG00000037827)	Tent5d (ENSRNOG00000023637)	Chmp1b2 (ENSRNOG00000002323) #31
Lesser Egyptian jerboa	MODERN SPECIES	173						Klhl4 (ENSJJAG00000000299) #12	ENSJJAG00000000038	Dach2 (ENSJJAG00000014515) #13	Chm (ENSJJAG00000012459) #14	Pof1b (ENSJJAG00000010917) #15	Zfp711 (ENSJJAG00000010450) #16	ENSJJAG00000009900	Apool (ENSJJAG00000007396) #17	4933403O08Rik (ENSJJAG00000005323) #18	Hdx (ENSJJAG00000004610) #21	Rps6ka6 (ENSJJAG00000023727) #22	ENSJJAG00000022602	ENSJJAG00000022439	ENSJJAG00000022322	Pou3f4 (ENSJJAG00000012452) #23	ENSJJAG00000022040	ENSJJAG00000021895 #26	Brwd3 (ENSJJAG00000022949) #29
Kangaroo rat	MODERN SPECIES	399	ENSDORG00000029858	Pcdh11x (ENSDORG00000011507)	ENSDORG00000023362	ENSDORG00000028193	Klhl4 (ENSDORG00000013698) #12	Dach2 (ENSDORG00000005499) #13	ENSDORG00000029836	Chm (ENSDORG00000011463) #14	ENSDORG00000026546	Pof1b (ENSDORG00000012012) #15	Zfp711 (ENSDORG00000012010) #16	Apool (ENSDORG00000011045) #17	4933403O08Rik (ENSDORG00000027967) #18	ENSDORG00000029968 #20	Hdx (ENSDORG00000012098) #21	Rps6ka6 (ENSDORG00000008579) #22	Pou3f4 (ENSDORG00000006273) #23	Sh3bgrl (ENSDORG00000029190) #26	Brwd3 (ENSDORG00000003314) #29
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000154426.b.a	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b
Sciuridae	ANCESTRAL SPECIES	35	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00940000163888.n	ENSGT00390000003732	ENSGT00940000163848	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b
Marmotini	ANCESTRAL SPECIES	78	ENSGT00950000183164.D	ENSGT00950000183164.C	ENSGT00940000153412.C.c	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00530000067269 #18	ENSGT00940000163888.m	ENSGT00940000163888.n	ENSGT00390000002792.cb #19	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b
Marmotini_b	ANCESTRAL SPECIES	121	ENSGT00940000153412.A.v	ENSGT00950000183164.D	ENSGT00950000183164.C.g	ENSGT00940000153412.C.c	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a #17	ENSGT00940000163888.n	ENSGT00390000002792.cb #19	ENSGT01000000216433 #20	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00940000161429 #23	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT00390000015930.e.b	ENSGT00940000162488	ENSGT00940000166733	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b
Squirrel	MODERN SPECIES	147	ENSSTOG00000027481	ENSSTOG00000016142	TCEAL7 (ENSSTOG00000005945)	ENSSTOG00000008144	ENSSTOG00000029794	DACH2 (ENSSTOG00000006685) #13	CHM (ENSSTOG00000022111) #14	POF1B (ENSSTOG00000011717) #15	ZNF711 (ENSSTOG00000008918) #16	ENSSTOG00000029673	APOOL (ENSSTOG00000005067) #17	ENSSTOG00000023046 #18	ENSSTOG00000027226	ENSSTOG00000033550 #20	HDX (ENSSTOG00000015440) #21	RPS6KA6 (ENSSTOG00000002290) #22	POU3F4 (ENSSTOG00000026467) #23	ENSSTOG00000026305	SH3BGRL (ENSSTOG00000013216) #26	ENSSTOG00000030741	BRWD3 (ENSSTOG00000004508) #29	ENSSTOG00000032417	TENT5D (ENSSTOG00000000603)	ENSSTOG00000031325	TBX22 (ENSSTOG00000003725) #32	ENSSTOG00000034456	ITM2A (ENSSTOG00000010140)	GPR174 (ENSSTOG00000010269)	P2RY10 (ENSSTOG00000000139)	LPAR4 (ENSSTOG00000014696)	RTL3 (ENSSTOG00000027152)
Arctic ground squirrel	MODERN SPECIES	459															HDX (ENSUPAG00010010763) #21	RPS6KA6 (ENSUPAG00010010784) #22	CYLC1 (ENSUPAG00010010852)
Alpin marmot	MODERN SPECIES	78	ENSMMMG00000010721	ENSMMMG00000010744	BEX4 (ENSMMMG00000010757)	ENSMMMG00000010766	ENSMMMG00000010770	TCEAL7 (ENSMMMG00000010775)	BEX3 (ENSMMMG00000010779)	DACH2 (ENSMMMG00000010801) #13	CHM (ENSMMMG00000010964) #14	POF1B (ENSMMMG00000011075) #15	ENSMMMG00000011100 #16	ENSMMMG00000011112	APOOL (ENSMMMG00000011126) #17	ENSMMMG00000011171 #19	HDX (ENSMMMG00000011191) #21	RPS6KA6 (ENSMMMG00000011222) #22	CYLC1 (ENSMMMG00000011257)	ENSMMMG00000011302	ENSMMMG00000011315	ENSMMMG00000011323	SH3BGRL (ENSMMMG00000011328) #26	ENSMMMG00000011334	ENSMMMG00000011351	TENT5D (ENSMMMG00000011385)	ENSMMMG00000011394 #31	TBX22 (ENSMMMG00000011419) #32	ENSMMMG00000011488	ENSMMMG00000011489	ITM2A (ENSMMMG00000011491)	GPR174 (ENSMMMG00000011530)	ENSMMMG00000011538
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005023291	ENSSVLG00005023323	ENSSVLG00005023341	KLHL4 (ENSSVLG00005023401) #12	DACH2 (ENSSVLG00005023583) #13	ENSSVLG00005023891 #14	POF1B (ENSSVLG00005023983) #15	ZNF711 (ENSSVLG00005024106) #16	ENSSVLG00005024140	ENSSVLG00005024204	APOOL (ENSSVLG00005024251) #17	ENSSVLG00005024287	ENSSVLG00005024295	ENSSVLG00005024315 #19	HDX (ENSSVLG00005024346) #21	RPS6KA6 (ENSSVLG00005024442) #22	CYLC1 (ENSSVLG00005024602)	POU3F4 (ENSSVLG00005024640) #23	ENSSVLG00005024677	ENSSVLG00005010323	ENSSVLG00005010356	ENSSVLG00005010369	SH3BGRL (ENSSVLG00005010419) #26	ENSSVLG00005010444	BRWD3 (ENSSVLG00005010574) #29	ENSSVLG00005010912	TENT5D (ENSSVLG00005010945)	ENSSVLG00005010961	ENSSVLG00005010993	TBX22 (ENSSVLG00005011035) #32	ITM2A (ENSSVLG00005011136)
Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00730000111097.e	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00530000063666.a #17	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000156017 #26	ENSGT00950000183107.a.b.b #29	ENSGT00940000162488	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b	ENSGT01100000263536.B.c.b	ENSGT00940000161697	ENSGT00390000008820.e.b #24
Hystricomorpha_a	ANCESTRAL SPECIES	51				ENSGT00730000111097.e	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00530000063666.a #17	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000156017 #26	ENSGT00950000183107.a.b.b #29	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b	ENSGT01100000263536.B.c.b	ENSGT00940000161697	ENSGT00390000008820.e.b #24	ENSGT00940000159568
Hystricomorpha_b	ANCESTRAL SPECIES	113				ENSGT00730000111097.e	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000163888	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00520000059318	ENSGT00530000063666.a #17	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000011425.A	ENSGT00940000156017 #26	ENSGT00950000183107.a.b.b #29	ENSGT00950000182832.D.b #31	ENSGT00940000161206 #32
Long-tailed chinchilla	MODERN SPECIES	236										POF1B (ENSCLAG00000001445) #15	ZNF711 (ENSCLAG00000006726) #16	ENSCLAG00000005441	APOOL (ENSCLAG00000005248) #17	HDX (ENSCLAG00000004931) #21	ENSCLAG00000004827	RPS6KA6 (ENSCLAG00000008786) #22	ENSCLAG00000007791	POU3F4 (ENSCLAG00000017671) #23	ENSCLAG00000007431	ENSCLAG00000007047	ENSCLAG00000006755	SH3BGRL (ENSCLAG00000006693) #26	ENSCLAG00000002689	BRWD3 (ENSCLAG00000002311) #29	ENSCLAG00000002120 #31	TBX22 (ENSCLAG00000001961) #32	ENSCLAG00000001888
Degu	MODERN SPECIES	144	ENSODEG00000000810	KLHL4 (ENSODEG00000000734) #12	ENSODEG00000000679	ENSODEG00000000657	DACH2 (ENSODEG00000000554) #13	ENSODEG00000018560	CHM (ENSODEG00000001208) #14	ENSODEG00000001180	POF1B (ENSODEG00000001140) #15	ZNF711 (ENSODEG00000001046) #16	ENSODEG00000001004	ENSODEG00000000990	APOOL (ENSODEG00000000970) #17	ENSODEG00000000866	HDX (ENSODEG00000000832) #21	RPS6KA6 (ENSODEG00000003590) #22	POU3F4 (ENSODEG00000019055) #23	ENSODEG00000003430	ENSODEG00000003422	SH3BGRL (ENSODEG00000003326) #26	BRWD3 (ENSODEG00000003272) #29	ENSODEG00000003179	ENSODEG00000001423 #31	TBX22 (ENSODEG00000001209) #32	ENSODEG00000001116
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000049697	ENSHGLG00000002543 #12	ENSHGLG00000034462	ENSHGLG00000020892	DACH2 (ENSHGLG00000008869) #13	CHM (ENSHGLG00000002772) #14	ENSHGLG00000041349	ENSHGLG00000033497	POF1B (ENSHGLG00000003095) #15	ZNF711 (ENSHGLG00000003254) #16	ENSHGLG00000003516	APOOL (ENSHGLG00000003635) #17	ENSHGLG00000035970	ENSHGLG00000045926	HDX (ENSHGLG00000003945) #21	RPS6KA6 (ENSHGLG00000004511) #22	ENSHGLG00000037398	ENSHGLG00000040597	ENSHGLG00000050316 #23	ENSHGLG00000050061	ENSHGLG00000005940	ENSHGLG00000020202	ENSHGLG00000020488	ENSHGLG00000007062	ENSHGLG00000007722 #26	ENSHGLG00000037295	BRWD3 (ENSHGLG00000002063) #29	ENSHGLG00000041421	TENT5D (ENSHGLG00000020434)	ENSHGLG00000000868 #31	TBX22 (ENSHGLG00000001099) #32
Lagomorpha	ANCESTRAL SPECIES	95	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000159818 #12	ENSGT00390000001134.b #13	ENSGT00950000182994.A.n.a #14	ENSGT00390000000141 #15	ENSGT00940000159611 #16	ENSGT00950000183121.b.b.b.a	ENSGT00520000059318	ENSGT00530000063666.a #17	ENSGT00940000163888	ENSGT00530000067269 #18	ENSGT00390000008591 #21	ENSGT00940000159242 #22	ENSGT00730000111075.b	ENSGT00940000161429 #23	ENSGT00390000017581.a	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000165353	ENSGT00940000156017 #26	ENSGT00730000111570	ENSGT00950000183107.a.b.b #29	ENSGT01050000244948.d	ENSGT00950000183115.b.b	ENSGT01030000234518.D	ENSGT01100000263536.A.a.a.a	ENSGT01100000263536.A.a.a.b	ENSGT01100000263536.B.c.b
Rabbit	DUPLICATION
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	1401	ENSOCUG00000029146	ENSOCUG00000001826 #12	ENSOCUG00000023763	DACH2 (ENSOCUG00000004513) #13	CHM (ENSOCUG00000012819) #14	ENSOCUG00000036844	ENSOCUG00000025426	POF1B (ENSOCUG00000008812) #15	ZNF711 (ENSOCUG00000023926) #16	ENSOCUG00000010085	ENSOCUG00000034512	APOOL (ENSOCUG00000003369) #17	ENSOCUG00000031808	ENSOCUG00000027774 #18	HDX (ENSOCUG00000000903) #21	ENSOCUG00000006428 #22	CYLC1 (ENSOCUG00000005157)	POU3F4 (ENSOCUG00000010927) #23	ENSOCUG00000021892	ENSOCUG00000005222	ENSOCUG00000029757	ENSOCUG00000027690	ENSOCUG00000025499	ENSOCUG00000028103	SH3BGRL (ENSOCUG00000014035) #26	HMGN5 (ENSOCUG00000029345)	ENSOCUG00000038725	BRWD3 (ENSOCUG00000005170) #29	ENSOCUG00000026656	ENSOCUG00000031557	ENSOCUG00000022541
Rabbit	MODERN SPECIES	6	ENSOCUG00000031712	ENSOCUG00000037044	ENSOCUG00000023919	TACR3 (ENSOCUG00000009581)	ENSOCUG00000015536	ENSOCUG00000034203	ENSOCUG00000037821	ENSOCUG00000026448	ENSOCUG00000021908	TET2 (ENSOCUG00000007098)	PPA2 (ENSOCUG00000005941)	ARHGEF38 (ENSOCUG00000027996)	INTS12 (ENSOCUG00000011321)	GSTCD (ENSOCUG00000003884)	NPNT (ENSOCUG00000012530)	ENSOCUG00000032155 #22	TBCK (ENSOCUG00000008514)	AIMP1 (ENSOCUG00000002043)	GIMD1 (ENSOCUG00000026543)	DKK2 (ENSOCUG00000001765)	PAPSS1 (ENSOCUG00000004622)	SGMS2 (ENSOCUG00000009998)	CYP2U1 (ENSOCUG00000002281)	HADH (ENSOCUG00000014271)	LEF1 (ENSOCUG00000010436)	ENSOCUG00000024066	ENSOCUG00000021006	ENSOCUG00000029357	ENSOCUG00000011056	ETNPPL (ENSOCUG00000015610)	COL25A1 (ENSOCUG00000000201)
Rabbit	MODERN SPECIES	1401	PFKFB1 (ENSOCUG00000001716)	ALAS2 (ENSOCUG00000013603)	ENSOCUG00000033823	USP51 (ENSOCUG00000022810)	MAGEH1 (ENSOCUG00000011207)	RRAGB (ENSOCUG00000008666)	KLF8 (ENSOCUG00000005068)	UBQLN2 (ENSOCUG00000025886)	ENSOCUG00000005727	ENSOCUG00000008428	ENSOCUG00000004874	ENSOCUG00000039678	ENSOCUG00000009671	ENSOCUG00000026457	FAAH2 (ENSOCUG00000029015)	ENSOCUG00000032805 #22	ENSOCUG00000003505	ENSOCUG00000022866	SPIN4 (ENSOCUG00000017930)	ENSOCUG00000029401	ENSOCUG00000031797	ENSOCUG00000027796	ENSOCUG00000011267	ENSOCUG00000030864	AMER1 (ENSOCUG00000001613)	ASB12 (ENSOCUG00000023698)	MTMR8 (ENSOCUG00000001617)	ENSOCUG00000023259	ENSOCUG00000029232	ZC4H2 (ENSOCUG00000013393)	ZC3H12B (ENSOCUG00000006130)
Tree shrew	MODERN SPECIES	3779																RPS6KA6 (ENSTBEG00000014770) #22