Sarcopterygii	ANCESTRAL SPECIES	58															ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000158082.a.a ##37	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00390000009899.b	ENSGT00940000155263	ENSGT00940000154380.a	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00390000014443	ENSGT00530000063347.B #20	ENSGT00940000159926 #19	ENSGT00940000165748	ENSGT00940000160243 #17	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000158082.a.a ##37	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Amniota	ANCESTRAL SPECIES	45	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162777	ENSGT00940000156551	ENSGT00940000160284	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37
Mammalia	ANCESTRAL SPECIES	36	ENSGT00730000111591	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000168513
Theria	ANCESTRAL SPECIES		ENSGT00730000111591	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Eutheria	ANCESTRAL SPECIES	1	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00390000014201	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Primates	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d.n.a #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00730000111591	ENSGT00940000154156.d.n.a.b #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.u #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.u #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Macaca	ANCESTRAL SPECIES	3	ENSGT00730000111591	ENSGT00940000154156.d.n.a.b #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.u #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.q.a.c
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00730000111591	ENSGT00940000154156.d.n.a.b #7	ENSGT00940000163244.d.b.a.b.b.b.b.a.b.a #8	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.u #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT01100000263539.b.a.a.a.a.b.a.b.a.b #29	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Rhesus	MODERN SPECIES	13	IMPDH1 (ENSMMUG00000014509) #7	ENSMMUG00000059386 #8	GARIN1A (ENSMMUG00000014512) #9	GARIN1B (ENSMMUG00000009612) #10	CALU (ENSMMUG00000009616) #11	OPN1SW (ENSMMUG00000060185) #12	CCDC136 (ENSMMUG00000009625) #13	FLNC (ENSMMUG00000006296) #14	ENSMMUG00000039360 #15	ATP6V1FNB (ENSMMUG00000054920) #16	KCP (ENSMMUG00000006306) #17	ENSMMUG00000058562 #18	IRF5 (ENSMMUG00000018478) #19	TNPO3 (ENSMMUG00000004311) #20	TSPAN33 (ENSMMUG00000012109) #21	SMO (ENSMMUG00000012110) #22	AHCYL2 (ENSMMUG00000019358) #23	STRIP2 (ENSMMUG00000019359) #24	SMKR1 (ENSMMUG00000058224) #25	NRF1 (ENSMMUG00000041919) #26	UBE2H (ENSMMUG00000017542) #27	ZC3HC1 (ENSMMUG00000006155) #28	ENSMMUG00000061007 #29	KLHDC10 (ENSMMUG00000009325) #30	TMEM209 (ENSMMUG00000030170) #31	SSMEM1 (ENSMMUG00000010060) #32	CPA2 (ENSMMUG00000061752) #33	ENSMMUG00000063777 #34	CPA4 (ENSMMUG00000019377) #35	CPA5 (ENSMMUG00000009494) #36	CPA1 (ENSMMUG00000009495) #37
Crab-eating macaque	MODERN SPECIES	13	GARIN1A (ENSMFAG00000045927) #9	GARIN1B (ENSMFAG00000000842) #10	CALU (ENSMFAG00000033268) #11	OPN1SW (ENSMFAG00000036697) #12	CCDC136 (ENSMFAG00000001602) #13	FLNC (ENSMFAG00000001934) #18	ENSMFAG00000049671 #15	ATP6V1FNB (ENSMFAG00000038017) #16	KCP (ENSMFAG00000035427) #17	ENSMFAG00000037942	IRF5 (ENSMFAG00000043616) #19	TNPO3 (ENSMFAG00000032385) #20	ENSMFAG00000052465	TSPAN33 (ENSMFAG00000038610) #21	ENSMFAG00000054840	SMO (ENSMFAG00000045402) #22	AHCYL2 (ENSMFAG00000039128) #23	STRIP2 (ENSMFAG00000041411) #24	SMKR1 (ENSMFAG00000039339) #25	NRF1 (ENSMFAG00000004077) #26	UBE2H (ENSMFAG00000059963) #27	ZC3HC1 (ENSMFAG00000030176) #28	ENSMFAG00000055632 #29	ENSMFAG00000063679	KLHDC10 (ENSMFAG00000041650) #30	TMEM209 (ENSMFAG00000046068) #31	SSMEM1 (ENSMFAG00000031766) #32	CPA2 (ENSMFAG00000042924) #33	CPA4 (ENSMFAG00000033972) #35	CPA5 (ENSMFAG00000045025) #36	CEP41 (ENSMFAG00000002202)
Pig-tailed macaque	MODERN SPECIES	479										ATP6V1F (ENSMNEG00000043397) #15	ATP6V1FNB (ENSMNEG00000028875) #16	KCP (ENSMNEG00000032049) #17	TNPO3 (ENSMNEG00000045277) #20	ENSMNEG00000034493	TSPAN33 (ENSMNEG00000030658) #21	SMO (ENSMNEG00000034127) #22	AHCYL2 (ENSMNEG00000036585) #23	STRIP2 (ENSMNEG00000029488) #24	SMKR1 (ENSMNEG00000030136) #25	NRF1 (ENSMNEG00000041338) #26	UBE2H (ENSMNEG00000039257) #27	ZC3HC1 (ENSMNEG00000011833) #28	KLHDC10 (ENSMNEG00000045353) #30	TMEM209 (ENSMNEG00000030003) #31	SSMEM1 (ENSMNEG00000032593) #32	CPA2 (ENSMNEG00000038670) #33	CPA4 (ENSMNEG00000032910) #35	CPA5 (ENSMNEG00000029973) #36	CPA1 (ENSMNEG00000039515) #37	CEP41 (ENSMNEG00000036663)	ENSMNEG00000043981
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.u #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Cercopithecinae_d	ANCESTRAL SPECIES	24	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.u #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.q.a.c
Sooty mangabey	MODERN SPECIES	283	GARIN1A (ENSCATG00000035689) #9	GARIN1B (ENSCATG00000040551) #10	CALU (ENSCATG00000045109) #11	OPN1SW (ENSCATG00000036352) #12	CCDC136 (ENSCATG00000044881) #13	FLNC (ENSCATG00000045130) #18	ATP6V1F (ENSCATG00000033101) #15	ATP6V1FNB (ENSCATG00000045123) #16	KCP (ENSCATG00000041916) #17	ENSCATG00000043121 #18	IRF5 (ENSCATG00000042022) #19	TNPO3 (ENSCATG00000030018) #20	ENSCATG00000033314	ENSCATG00000040381	TSPAN33 (ENSCATG00000032115) #21	SMO (ENSCATG00000033618) #22	AHCYL2 (ENSCATG00000039735) #23	STRIP2 (ENSCATG00000038915) #24	SMKR1 (ENSCATG00000036171) #25	NRF1 (ENSCATG00000042516) #26	UBE2H (ENSCATG00000030074) #27	ZC3HC1 (ENSCATG00000023130) #28	KLHDC10 (ENSCATG00000045133) #30	TMEM209 (ENSCATG00000035807) #31	SSMEM1 (ENSCATG00000031046) #32	CPA2 (ENSCATG00000010458) #33	CPA4 (ENSCATG00000044137) #35	CPA5 (ENSCATG00000033540) #36	CPA1 (ENSCATG00000038938) #37	CEP41 (ENSCATG00000036827)	ENSCATG00000026831
Drill	MODERN SPECIES	1191	HILPDA (ENSMLEG00000027323)	ENSMLEG00000035321 #9	GARIN1B (ENSMLEG00000036468) #10	CALU (ENSMLEG00000043790) #11	OPN1SW (ENSMLEG00000031571) #12	CCDC136 (ENSMLEG00000028513) #13	FLNC (ENSMLEG00000042309) #18	ATP6V1F (ENSMLEG00000037581) #15	ATP6V1FNB (ENSMLEG00000038182) #16	KCP (ENSMLEG00000044089) #17	IRF5 (ENSMLEG00000030409) #19	TNPO3 (ENSMLEG00000037881) #20	ENSMLEG00000007953	ENSMLEG00000035786	TSPAN33 (ENSMLEG00000034615) #21	SMO (ENSMLEG00000014098) #22	AHCYL2 (ENSMLEG00000043174) #23	STRIP2 (ENSMLEG00000036316) #24	SMKR1 (ENSMLEG00000030285) #25	NRF1 (ENSMLEG00000044405) #26	UBE2H (ENSMLEG00000041153) #27	ZC3HC1 (ENSMLEG00000027328) #28	KLHDC10 (ENSMLEG00000043186) #30	TMEM209 (ENSMLEG00000014963) #31	SSMEM1 (ENSMLEG00000042413) #32	CPA2 (ENSMLEG00000030622) #33	CPA4 (ENSMLEG00000034794) #35	CPA5 (ENSMLEG00000040564) #36	CPA1 (ENSMLEG00000036340) #37	CEP41 (ENSMLEG00000034767)	MEST (ENSMLEG00000005938)
Olive baboon	MODERN SPECIES	14	PRRT4 (ENSPANG00000048387)	IMPDH1 (ENSPANG00000011996) #7	ENSPANG00000043463	GARIN1A (ENSPANG00000022684) #9	GARIN1B (ENSPANG00000021952) #10	CALU (ENSPANG00000019818) #11	OPN1SW (ENSPANG00000010444) #12	CCDC136 (ENSPANG00000018192) #13	FLNC (ENSPANG00000025046) #18	ENSPANG00000021225 #15	ATP6V1FNB (ENSPANG00000030450) #16	KCP (ENSPANG00000021951) #17	IRF5 (ENSPANG00000018384) #19	TNPO3 (ENSPANG00000022226) #20	TSPAN33 (ENSPANG00000000813) #21	SMO (ENSPANG00000000814) #22	AHCYL2 (ENSPANG00000014474) #23	STRIP2 (ENSPANG00000001240) #24	SMKR1 (ENSPANG00000019785) #25	NRF1 (ENSPANG00000020183) #26	UBE2H (ENSPANG00000025045) #27	ENSPANG00000041876 ##29	ZC3HC1 (ENSPANG00000014229) #28	KLHDC10 (ENSPANG00000021002) #30	ENSPANG00000044722	TMEM209 (ENSPANG00000021722) #31	SSMEM1 (ENSPANG00000014473) #32	CPA2 (ENSPANG00000032358) #33	CPA4 (ENSPANG00000015021) #35	CPA5 (ENSPANG00000006518) #36	CPA1 (ENSPANG00000009821) #37
Vervet Monkey	MODERN SPECIES	13	RBM28 (ENSCSAG00000010161)	PRRT4 (ENSCSAG00000010151)	IMPDH1 (ENSCSAG00000010128) #7	HILPDA (ENSCSAG00000010075)	GARIN1A (ENSCSAG00000010068) #9	GARIN1B (ENSCSAG00000010065) #10	CALU (ENSCSAG00000010054) #11	OPN1SW (ENSCSAG00000010043) #12	CCDC136 (ENSCSAG00000010021) #13	FLNC (ENSCSAG00000009985) #18	ATP6V1F (ENSCSAG00000009973) #15	IRF5 (ENSCSAG00000009970) #19	TNPO3 (ENSCSAG00000009966) #20	ENSCSAG00000019138	TSPAN33 (ENSCSAG00000009943) #21	SMO (ENSCSAG00000009935) #22	AHCYL2 (ENSCSAG00000009928) #23	STRIP2 (ENSCSAG00000009916) #24	SMKR1 (ENSCSAG00000009896) #25	ENSCSAG00000019139	NRF1 (ENSCSAG00000009893) #26	UBE2H (ENSCSAG00000009886) #27	ZC3HC1 (ENSCSAG00000009881) #28	KLHDC10 (ENSCSAG00000009874) #30	TMEM209 (ENSCSAG00000009864) #31	SSMEM1 (ENSCSAG00000009851) #32	CPA2 (ENSCSAG00000009833) #33	CPA4 (ENSCSAG00000009806) #35	CPA5 (ENSCSAG00000009783) #36	CPA1 (ENSCSAG00000009744) #37	CEP41 (ENSCSAG00000009738)
Rhinopithecus	ANCESTRAL SPECIES	90	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00910000147710	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00390000018316.b.a.a.a	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37
Black snub-nosed monkey	MODERN SPECIES	1271	GARIN1A (ENSRBIG00000039139) #9	GARIN1B (ENSRBIG00000030558) #10	CALU (ENSRBIG00000032938) #11	OPN1SW (ENSRBIG00000037951) #12	CCDC136 (ENSRBIG00000044440) #13	FLNC (ENSRBIG00000026980) #18	ATP6V1F (ENSRBIG00000042625) #15	ATP6V1FNB (ENSRBIG00000008769) #16	KCP (ENSRBIG00000039481) #17	ENSRBIG00000031121 #18	IRF5 (ENSRBIG00000044839) #19	TNPO3 (ENSRBIG00000042549) #20	ENSRBIG00000041904	ENSRBIG00000014871	TSPAN33 (ENSRBIG00000039156) #21	SMO (ENSRBIG00000044020) #22	AHCYL2 (ENSRBIG00000041432) #23
Golden snub-nosed monkey	MODERN SPECIES	2112	HILPDA (ENSRROG00000022886)	GARIN1A (ENSRROG00000035800) #9	GARIN1B (ENSRROG00000045564) #10	CALU (ENSRROG00000039876) #11	OPN1SW (ENSRROG00000035396) #12	CCDC136 (ENSRROG00000039714) #13	FLNC (ENSRROG00000027456) #18	ATP6V1F (ENSRROG00000041403) #15	ATP6V1FNB (ENSRROG00000045325) #16	KCP (ENSRROG00000041604) #17	IRF5 (ENSRROG00000030142) #19	TNPO3 (ENSRROG00000039264) #20	ENSRROG00000002587	ENSRROG00000044830	TSPAN33 (ENSRROG00000030869) #21	SMO (ENSRROG00000030252) #22	AHCYL2 (ENSRROG00000036535) #23	STRIP2 (ENSRROG00000024509) #24	SMKR1 (ENSRROG00000044193) #25	NRF1 (ENSRROG00000030640) #26	UBE2H (ENSRROG00000038940) #27	ENSRROG00000041566	ENSRROG00000023853	ENSRROG00000044803	ZC3HC1 (ENSRROG00000041831) #28	ENSRROG00000026563	KLHDC10 (ENSRROG00000030633) #30	TMEM209 (ENSRROG00000024947) #31	SSMEM1 (ENSRROG00000037968) #32	CPA2 (ENSRROG00000043354) #33	CPA4 (ENSRROG00000035616) #35
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00730000111591	ENSGT00940000154156.d.n.a.b #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00510000046985.h.b.a.a.a	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Hominidae	ANCESTRAL SPECIES	11	ENSGT00730000111591	ENSGT00940000154156.d.n.a.b #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.y.a #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00510000046985.h.b.a.a.a	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00960000190858	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.y.a #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000153487.b.a.f	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00510000046985.h.b.a.a.a	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00910000147710	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Gorilla	MODERN SPECIES	20	GARIN1A (ENSGGOG00000026799) #9	ENSGGOG00000004895 #10	CALU (ENSGGOG00000005817) #11	OPN1SW (ENSGGOG00000005822) #12	CCDC136 (ENSGGOG00000005828) #13	FLNC (ENSGGOG00000002420) #18	ATP6V1F (ENSGGOG00000023527) #15	ATP6V1FNB (ENSGGOG00000038602) #16	KCP (ENSGGOG00000015103) #17	IRF5 (ENSGGOG00000012013) #19	TNPO3 (ENSGGOG00000008339) #20	ENSGGOG00000023221	ENSGGOG00000036972	ENSGGOG00000027737	TSPAN33 (ENSGGOG00000007835) #21	SMO (ENSGGOG00000003227) #22	AHCYL2 (ENSGGOG00000025074) #23	STRIP2 (ENSGGOG00000016807) #24	ENSGGOG00000022169	SMKR1 (ENSGGOG00000038256) #25	NRF1 (ENSGGOG00000010726) #26	UBE2H (ENSGGOG00000042613) #27	ENSGGOG00000039406	ZC3HC1 (ENSGGOG00000015504) #28	KLHDC10 (ENSGGOG00000000677) #30	TMEM209 (ENSGGOG00000034882) #31	SSMEM1 (ENSGGOG00000038460) #32	CPA2 (ENSGGOG00000002408) #33	CPA4 (ENSGGOG00000040989) #35	CPA5 (ENSGGOG00000002414) #36	CPA1 (ENSGGOG00000002419) #37
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.y.a.a #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000153487.b.a.f	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00910000147710	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37
Pan	ANCESTRAL SPECIES	13	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.y.a.a #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000153487.b.a.f	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00910000147710	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	GARIN1A (ENSPTRG00000028396) #9	GARIN1B (ENSPTRG00000019667) #10	CALU (ENSPTRG00000050961) #11	OPN1SW (ENSPTRG00000019669) #12	CCDC136 (ENSPTRG00000019670) #13	FLNC (ENSPTRG00000019671) #18	ATP6V1F (ENSPTRG00000019672) #15	ATP6V1FNB (ENSPTRG00000050196) #16	KCP (ENSPTRG00000045199) #17	IRF5 (ENSPTRG00000019675) #19	TNPO3 (ENSPTRG00000019676) #20	ENSPTRG00000050813	ENSPTRG00000043840	ENSPTRG00000042432	TSPAN33 (ENSPTRG00000019678) #21	SMO (ENSPTRG00000019680) #22	AHCYL2 (ENSPTRG00000019681) #23	STRIP2 (ENSPTRG00000019682) #24	ENSPTRG00000048623 #25	NRF1 (ENSPTRG00000019683) #26	UBE2H (ENSPTRG00000041671) #27	ENSPTRG00000050994	ZC3HC1 (ENSPTRG00000019685) #28	KLHDC10 (ENSPTRG00000019687) #30	TMEM209 (ENSPTRG00000019691) #31	SSMEM1 (ENSPTRG00000019692) #32	CPA2 (ENSPTRG00000019693) #33	CPA4 (ENSPTRG00000019694) #35	CPA5 (ENSPTRG00000019695) #36	CPA1 (ENSPTRG00000019696) #37	CEP41 (ENSPTRG00000052638)
Chimpanzee	MODERN SPECIES	571													ENSPTRG00000048391	ENSPTRG00000050269	ENSPTRG00000047489 #21	ENSPTRG00000047167 #22	ENSPTRG00000052110	ENSPTRG00000051713 #23	ENSPTRG00000046573 #24	ENSPTRG00000052315 #25
Bonobo	MODERN SPECIES	20	ENSPPAG00000041977	GARIN1A (ENSPPAG00000036357) #9	ENSPPAG00000041706 #10	CALU (ENSPPAG00000028481) #11	OPN1SW (ENSPPAG00000040601) #12	CCDC136 (ENSPPAG00000038709) #13	FLNC (ENSPPAG00000035541) #18	ENSPPAG00000027671 #15	ATP6V1FNB (ENSPPAG00000034113) #16	KCP (ENSPPAG00000001412) #17	IRF5 (ENSPPAG00000031382) #19	TNPO3 (ENSPPAG00000034975) #20	ENSPPAG00000010380	ENSPPAG00000026536	TSPAN33 (ENSPPAG00000029860) #21	SMO (ENSPPAG00000032237) #22	AHCYL2 (ENSPPAG00000039508) #23	STRIP2 (ENSPPAG00000036173) #24	NRF1 (ENSPPAG00000040353) #26	UBE2H (ENSPPAG00000040966) #27	ENSPPAG00000043329	ZC3HC1 (ENSPPAG00000043172) #28	KLHDC10 (ENSPPAG00000035194) #30	TMEM209 (ENSPPAG00000029839) #31	SSMEM1 (ENSPPAG00000029778) #32	CPA2 (ENSPPAG00000042610) #33	CPA4 (ENSPPAG00000024844) #35	CPA5 (ENSPPAG00000028093) #36	CPA1 (ENSPPAG00000038156) #37	CEP41 (ENSPPAG00000027998)	MEST (ENSPPAG00000042166)
Human	MODERN SPECIES	19	IMPDH1 (ENSG00000106348) #7	HILPDA (ENSG00000135245)	METTL2B (ENSG00000165055)	GARIN1A (ENSG00000205085) #9	GARIN1B (ENSG00000135248) #10	CALU (ENSG00000128595) #11	OPN1SW (ENSG00000128617) #12	CCDC136 (ENSG00000128596) #13	FLNC (ENSG00000128591) #18	KCP (ENSG00000135253) #17	ATP6V1F (ENSG00000128524) #15	ATP6V1FNB (ENSG00000272899) #16	IRF5 (ENSG00000128604) #19	TNPO3 (ENSG00000064419) #20	TSPAN33 (ENSG00000158457) #21	SMO (ENSG00000128602) #22	AHCYL2 (ENSG00000158467) #23	STRIP2 (ENSG00000128578) #24	SMKR1 (ENSG00000240204) #25	NRF1 (ENSG00000106459) #26	UBE2H (ENSG00000186591) #27	ZC3HC1 (ENSG00000091732) #28	KLHDC10 (ENSG00000128607) #30	TMEM209 (ENSG00000146842) #31	SSMEM1 (ENSG00000165120) #32	CPA2 (ENSG00000158516) #33	CPA4 (ENSG00000128510) #35	CPA5 (ENSG00000158525) #36	CPA1 (ENSG00000091704) #37	CEP41 (ENSG00000106477)	MEST (ENSG00000106484)
Orangutan	MODERN SPECIES	20	ENSPPYG00000037429	ENSPPYG00000033487	ENSPPYG00000035564	GARIN1A (ENSPPYG00000017980) #9	GARIN1B (ENSPPYG00000017981) #10	CALU (ENSPPYG00000017982) #11	OPN1SW (ENSPPYG00000017983) #12	CCDC136 (ENSPPYG00000017984) #13	FLNC (ENSPPYG00000017985) #18	ATP6V1F (ENSPPYG00000017986) #15	ATP6V1FNB (ENSPPYG00000031385) #16	KCP (ENSPPYG00000017988) #17	IRF5 (ENSPPYG00000017989) #19	TNPO3 (ENSPPYG00000017990) #20	TSPAN33 (ENSPPYG00000017992) #21	SMO (ENSPPYG00000017993) #22	AHCYL2 (ENSPPYG00000017994) #23	STRIP2 (ENSPPYG00000017995) #24	SMKR1 (ENSPPYG00000040980) #25	NRF1 (ENSPPYG00000017996) #26	UBE2H (ENSPPYG00000039929) #27	ZC3HC1 (ENSPPYG00000017998) #28	KLHDC10 (ENSPPYG00000017999) #30	ENSPPYG00000039352	TMEM209 (ENSPPYG00000018000) #31	SSMEM1 (ENSPPYG00000018001) #32	CPA2 (ENSPPYG00000018002) #33	CPA4 (ENSPPYG00000033802) #35	CPA5 (ENSPPYG00000018003) #36	CPA1 (ENSPPYG00000018004) #37	CEP41 (ENSPPYG00000018005)
Gibbon	MODERN SPECIES	3	ENSNLEG00000012374 #10	CALU (ENSNLEG00000012380) #11	OPN1SW (ENSNLEG00000012417) #12	CCDC136 (ENSNLEG00000012424) #13	FLNC (ENSNLEG00000012428) #18	ATP6V1F (ENSNLEG00000012442) #15	ATP6V1FNB (ENSNLEG00000012447) #16	KCP (ENSNLEG00000012449) #17	IRF5 (ENSNLEG00000012454) #19	TNPO3 (ENSNLEG00000012491) #20	ENSNLEG00000027686	ENSNLEG00000031882	ENSNLEG00000028436	ENSNLEG00000012555	TSPAN33 (ENSNLEG00000012558) #21	SMO (ENSNLEG00000012575) #22	AHCYL2 (ENSNLEG00000012581) #23	STRIP2 (ENSNLEG00000012629) #24	ENSNLEG00000031314	SMKR1 (ENSNLEG00000018605) #25	NRF1 (ENSNLEG00000012659) #26	UBE2H (ENSNLEG00000012685) #27	ZC3HC1 (ENSNLEG00000012698) #28	KLHDC10 (ENSNLEG00000012718) #30	ENSNLEG00000029386	TMEM209 (ENSNLEG00000012732) #31	SSMEM1 (ENSNLEG00000012746) #32	CPA2 (ENSNLEG00000012753) #33	CPA4 (ENSNLEG00000012761) #35	CPA5 (ENSNLEG00000012777) #36	CPA1 (ENSNLEG00000012802) #37
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00730000111591	ENSGT00940000154156.d.m ##7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222.m
Cebidae	ANCESTRAL SPECIES	9	ENSGT00730000111591	ENSGT00940000154156.d.m ##7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222.m	ENSGT00510000047602.o
Marmoset	MODERN SPECIES	20	ENSCJAG00000072209	GARIN1A (ENSCJAG00000017814) #9	ENSCJAG00000070472 ##29	GARIN1B (ENSCJAG00000017818) #10	CALU (ENSCJAG00000017825) #11	OPN1SW (ENSCJAG00000017852) #12	CCDC136 (ENSCJAG00000017866) #13	FLNC (ENSCJAG00000017889) #18	ATP6V1F (ENSCJAG00000046281) #15	ATP6V1FNB (ENSCJAG00000045477) #16	ENSCJAG00000078135	KCP (ENSCJAG00000018035) #17	IRF5 (ENSCJAG00000018061) #19	TNPO3 (ENSCJAG00000018085) #20	TSPAN33 (ENSCJAG00000010295) #21	SMO (ENSCJAG00000010304) #22	ENSCJAG00000085310	AHCYL2 (ENSCJAG00000010323) #23	STRIP2 (ENSCJAG00000010399) #24	SMKR1 (ENSCJAG00000043602) #25	NRF1 (ENSCJAG00000010505) #26	ENSCJAG00000010520 #27	ENSCJAG00000081810	ZC3HC1 (ENSCJAG00000010536) #28	KLHDC10 (ENSCJAG00000044282) #30	TMEM209 (ENSCJAG00000010584) #31	SSMEM1 (ENSCJAG00000010598) #32	CPA4 (ENSCJAG00000010655) #35	CPA5 (ENSCJAG00000010683) #36	CPA2 (ENSCJAG00000010612) #33	CEP41 (ENSCJAG00000010737)
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d.m ##7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222.m	ENSGT00510000047602.o
Capuchin	MODERN SPECIES	219	RBM28 (ENSCCAG00000035105)	PRRT4 (ENSCCAG00000024784)	IMPDH (ENSCCAG00000020872) ##7	FAM71F2 (ENSCCAG00000028902) #9	FAM71F1 (ENSCCAG00000032023) #10	CALU (ENSCCAG00000037513) #11	OPN1SW (ENSCCAG00000037669) #12	CCDC136 (ENSCCAG00000034758) #13	FLNC (ENSCCAG00000022550) #18	ENSCCAG00000034897 #15	ATP6V1FNB (ENSCCAG00000033294) #16	KCP (ENSCCAG00000024511) #17	IRF5 (ENSCCAG00000027172) #19	TNPO3 (ENSCCAG00000033826) #20	TSPAN33 (ENSCCAG00000016865) #21	SMO (ENSCCAG00000014906) #22	AHCYL2 (ENSCCAG00000024928) #23	ENSCCAG00000030747	STRIP2 (ENSCCAG00000034944) #24	SMKR1 (ENSCCAG00000035007) #25
Bolivian squirrel monkey	MODERN SPECIES	44	RBM28 (ENSSBOG00000012308)	PRRT4 (ENSSBOG00000025268)	ENSSBOG00000002650 ##7	ENSSBOG00000022858 #9	GARIN1B (ENSSBOG00000031604) #10	CALU (ENSSBOG00000025729) #11	OPN1SW (ENSSBOG00000022139) #12	CCDC136 (ENSSBOG00000028704) #13	FLNC (ENSSBOG00000025708) #18	ATP6V1F (ENSSBOG00000029644) #15	ATP6V1FNB (ENSSBOG00000021896) #16	KCP (ENSSBOG00000024349) #17	IRF5 (ENSSBOG00000024381) #19	TNPO3 (ENSSBOG00000029642) #20	TSPAN33 (ENSSBOG00000026557) #21	SMO (ENSSBOG00000034649) #22	AHCYL2 (ENSSBOG00000027053) #23	STRIP2 (ENSSBOG00000026530) #24	SMKR1 (ENSSBOG00000023260) #25	NRF1 (ENSSBOG00000022785) #26	ENSSBOG00000016230	UBE2H (ENSSBOG00000003551) #27	ZC3HC1 (ENSSBOG00000032787) #28	KLHDC10 (ENSSBOG00000023838) #30	TMEM209 (ENSSBOG00000034815) #31	SSMEM1 (ENSSBOG00000018209) #32	CPA2 (ENSSBOG00000035827) #33	CPA4 (ENSSBOG00000031999) #35	CPA5 (ENSSBOG00000024319) #36	CPA1 (ENSSBOG00000021629) #37	CEP41 (ENSSBOG00000020133)
Mas night monkey	MODERN SPECIES	299	ENSANAG00000037340 ##7	ENSANAG00000025900	GARIN1A (ENSANAG00000029574) #9	GARIN1B (ENSANAG00000027825) #10	CALU (ENSANAG00000035615) #11	OPN1SW (ENSANAG00000021023) #12	CCDC136 (ENSANAG00000022224) #13	FLNC (ENSANAG00000026943) #18	ATP6V1F (ENSANAG00000030314) #15	ATP6V1FNB (ENSANAG00000037209) #16	KCP (ENSANAG00000037944) #17	ENSANAG00000038296	IRF5 (ENSANAG00000038213) #19	TNPO3 (ENSANAG00000037940) #20	TSPAN33 (ENSANAG00000036420) #21	SMO (ENSANAG00000020298) #22	ENSANAG00000029950	AHCYL2 (ENSANAG00000037152) #23	STRIP2 (ENSANAG00000018966) #24	NRF1 (ENSANAG00000023619) #26	UBE2H (ENSANAG00000037214) #27	ZC3HC1 (ENSANAG00000022213) #28	KLHDC10 (ENSANAG00000037633) #30	TMEM209 (ENSANAG00000037913) #31	SSMEM1 (ENSANAG00000022613) #32	CPA2 (ENSANAG00000025802) #33	CPA4 (ENSANAG00000019610) #35	CPA5 (ENSANAG00000035744) #36	CPA1 (ENSANAG00000038343) #37	ENSANAG00000026861	ENSANAG00000030052
Tarsier	MODERN SPECIES	5404			FAM71F2 (ENSTSYG00000013591) #9	GARIN1B (ENSTSYG00000012829) #10	CALU (ENSTSYG00000009674) #11	OPN1SW (ENSTSYG00000009677) #12	CCDC136 (ENSTSYG00000004111) #13	FLNC (ENSTSYG00000012835) #18	ATP6V1F (ENSTSYG00000001415) #15	ATP6V1FNB (ENSTSYG00000033671) #16	KCP (ENSTSYG00000031612) #17	IRF5 (ENSTSYG00000032877) #19	ENSTSYG00000036632	TNPO3 (ENSTSYG00000002989) #20	TSPAN33 (ENSTSYG00000004914) #21	SMO (ENSTSYG00000033887) #22	ASPHD2 (ENSTSYG00000008057)	SEZ6L (ENSTSYG00000011898)	MYO18B (ENSTSYG00000002448)	GRK3 (ENSTSYG00000007859)
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Lemuriformes_a	ANCESTRAL SPECIES	111	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.q #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Greater bamboo lemur	MODERN SPECIES	154											ENSPSMG00000001277	IRF5 (ENSPSMG00000001189) #19	ENSPSMG00000001113	TNPO3 (ENSPSMG00000000710) #20	TSPAN33 (ENSPSMG00000000433) #21	SMO (ENSPSMG00000000418) #22	AHCYL2 (ENSPSMG00000000353) #23	STRIP2 (ENSPSMG00000000155) #24	SMKR1 (ENSPSMG00000000049) #25	NRF1 (ENSPSMG00000025903) #26	UBE2H (ENSPSMG00000025898) #27	ZC3HC1 (ENSPSMG00000025897) #28	KLHDC10 (ENSPSMG00000025896) #30	TMEM209 (ENSPSMG00000025895) #31	SSMEM1 (ENSPSMG00000025893) #32	CPA2 (ENSPSMG00000025892) #33	CPA4 (ENSPSMG00000025890) #35	CPA5 (ENSPSMG00000025889) #36	CPA1 (ENSPSMG00000025887) #37	CEP41 (ENSPSMG00000025885)
Coquerels sifaka	MODERN SPECIES	1007	PRRT4 (ENSPCOG00000014989)	IMPDH1 (ENSPCOG00000017804) #7	GARIN1A (ENSPCOG00000026970) #9	GARIN1B (ENSPCOG00000019037) #10	CALU (ENSPCOG00000027459) #11	OPN1SW (ENSPCOG00000020982) #12	CCDC136 (ENSPCOG00000019053) #13	FLNC (ENSPCOG00000017493) #18	ATP6V1F (ENSPCOG00000015785) #15	ATP6V1FNB (ENSPCOG00000021691) #16	KCP (ENSPCOG00000017217) #17	IRF5 (ENSPCOG00000011325) #19	TNPO3 (ENSPCOG00000023901) #20	ENSPCOG00000016900	TSPAN33 (ENSPCOG00000018235) #21	SMO (ENSPCOG00000026716) #22	AHCYL2 (ENSPCOG00000019538) #23	STRIP2 (ENSPCOG00000027430) #24	SMKR1 (ENSPCOG00000022145) #25	NRF1 (ENSPCOG00000025682) #26	UBE2H (ENSPCOG00000023838) #27	ZC3HC1 (ENSPCOG00000017354) #28	KLHDC10 (ENSPCOG00000028330) #30	TMEM209 (ENSPCOG00000012849) #31	SSMEM1 (ENSPCOG00000005182) #32	CPA2 (ENSPCOG00000006189) #33	CPA4 (ENSPCOG00000018447) #35	CPA5 (ENSPCOG00000027698) #36	CPA1 (ENSPCOG00000019820) #37	CEP41 (ENSPCOG00000013617)	MEST (ENSPCOG00000016024)
Mouse lemur	MODERN SPECIES	2	RBM28 (ENSMICG00000000107)	PRRT4 (ENSMICG00000027302)	IMPDH1 (ENSMICG00000000111) #7	GARIN1A (ENSMICG00000000114) #9	GARIN1B (ENSMICG00000036122) #10	CALU (ENSMICG00000000120) #11	OPN1SW (ENSMICG00000045275) #12	CCDC136 (ENSMICG00000000123) #13	FLNC (ENSMICG00000000126) #18	ATP6V1F (ENSMICG00000046492) #15	ATP6V1FNB (ENSMICG00000041907) #16	KCP (ENSMICG00000000136) #17	IRF5 (ENSMICG00000000138) #19	TNPO3 (ENSMICG00000000140) #20	TSPAN33 (ENSMICG00000015338) #21	SMO (ENSMICG00000015350) #22	AHCYL2 (ENSMICG00000015985) #23	STRIP2 (ENSMICG00000015996) #24	SMKR1 (ENSMICG00000045930) #25	ENSMICG00000047458	NRF1 (ENSMICG00000004218) #26	UBE2H (ENSMICG00000044025) #27	ENSMICG00000045781	ZC3HC1 (ENSMICG00000009167) #28	KLHDC10 (ENSMICG00000009171) #30	TMEM209 (ENSMICG00000035291) #31	SSMEM1 (ENSMICG00000035748) #32	CPA2 (ENSMICG00000047308) #33	CPA4 (ENSMICG00000006103) #35	CPA5 (ENSMICG00000006108) #36	CPA1 (ENSMICG00000006118) #37
Bushbaby	MODERN SPECIES	152	RBM28 (ENSOGAG00000006011)	PRRT4 (ENSOGAG00000026147)	IMPDH1 (ENSOGAG00000009795) #7	GARIN1A (ENSOGAG00000009804) #9	GARIN1B (ENSOGAG00000009808) #10	CALU (ENSOGAG00000009814) #11	CCDC136 (ENSOGAG00000009819) #13	FLNC (ENSOGAG00000009823) #18	ATP6V1F (ENSOGAG00000009831) #15	ATP6V1FNB (ENSOGAG00000026715) #16	KCP (ENSOGAG00000032295) #17	ENSOGAG00000032759 #18	IRF5 (ENSOGAG00000009608) #19	TNPO3 (ENSOGAG00000015340) #20	TSPAN33 (ENSOGAG00000013694) #21	SMO (ENSOGAG00000013697) #22	AHCYL2 (ENSOGAG00000013701) #23	STRIP2 (ENSOGAG00000013704) #24
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Tree shrew	MODERN SPECIES	4520																ENSTBEG00000004998 #22	AHCYL2 (ENSTBEG00000005265) #23
Glires	ANCESTRAL SPECIES	18	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Rodentia	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Hystricomorpha_a	ANCESTRAL SPECIES	43	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Hystricomorpha_b	ANCESTRAL SPECIES	85	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Long-tailed chinchilla	MODERN SPECIES	186	PRRT4 (ENSCLAG00000003937)	IMPDH1 (ENSCLAG00000004262) #7	ENSCLAG00000005074	GARIN1A (ENSCLAG00000005230) #9	GARIN1B (ENSCLAG00000005300) #10	CALU (ENSCLAG00000005800) #11	OPN1SW (ENSCLAG00000006304) #12	ENSCLAG00000006490 #13	FLNC (ENSCLAG00000004512) #18	ATP6V1F (ENSCLAG00000007944) #15	ATP6V1FNB (ENSCLAG00000008131) #16	KCP (ENSCLAG00000008238) #17	IRF5 (ENSCLAG00000010292) #19	TNPO3 (ENSCLAG00000016298) #20	TSPAN33 (ENSCLAG00000015056) #21	SMO (ENSCLAG00000012672) #22	AHCYL2 (ENSCLAG00000010097) #23	ENSCLAG00000005979	STRIP2 (ENSCLAG00000006452) #24	NRF1 (ENSCLAG00000011653) #26	UBE2H (ENSCLAG00000014785) #27	ENSCLAG00000014939	ZC3HC1 (ENSCLAG00000008260) #28	KLHDC10 (ENSCLAG00000008109) #30	TMEM209 (ENSCLAG00000009413) #31	SSMEM1 (ENSCLAG00000008476) #32	CPA2 (ENSCLAG00000008527) #33	CPA4 (ENSCLAG00000008944) #35	CPA5 (ENSCLAG00000006107) #36	CPA1 (ENSCLAG00000006324) #37	CEP41 (ENSCLAG00000006602)
Degu	MODERN SPECIES	201	PRRT4 (ENSODEG00000013465)	IMPDH1 (ENSODEG00000013707) #7	GARIN1A (ENSODEG00000012901) #9	GARIN1B (ENSODEG00000011956) #10	CALU (ENSODEG00000011897) #11	OPN1SW (ENSODEG00000013213) #12	ENSODEG00000013040 #13	FLNC (ENSODEG00000012609) #18	ATP6V1F (ENSODEG00000013471) #15	ATP6V1FNB (ENSODEG00000012220) #16	KCP (ENSODEG00000012598) #17	IRF5 (ENSODEG00000013467) #19	TNPO3 (ENSODEG00000012826) #20	ENSODEG00000013695	TSPAN33 (ENSODEG00000012549) #21	SMO (ENSODEG00000012811) #22	ENSODEG00000012926	ENSODEG00000020155	ENSODEG00000020258	AHCYL2 (ENSODEG00000014499) #23	STRIP2 (ENSODEG00000014429) #24	NRF1 (ENSODEG00000013841) #26	UBE2H (ENSODEG00000014391) #27	ZC3HC1 (ENSODEG00000014604) #28	KLHDC10 (ENSODEG00000013850) #30	ENSODEG00000012667 #31	SSMEM1 (ENSODEG00000014078) #32	ENSODEG00000020048	ENSODEG00000020051	CPA2 (ENSODEG00000013927) #33	ENSODEG00000012655
Guinea pig	MODERN SPECIES	11	IMPDH1 (ENSCPOG00000006264) #7	HILPDA (ENSCPOG00000037851)	ENSCPOG00000037525	GARIN1A (ENSCPOG00000020934) #9	GARIN1B (ENSCPOG00000003688) #10	CALU (ENSCPOG00000010201) #11	OPN1SW (ENSCPOG00000010209) #12	CCDC136 (ENSCPOG00000007170) #13	FLNC (ENSCPOG00000001395) #18	ATP6V1F (ENSCPOG00000040466) #15	ATP6V1FNB (ENSCPOG00000038022) #16	KCP (ENSCPOG00000025035) #17	IRF5 (ENSCPOG00000000246) #19	TNPO3 (ENSCPOG00000039784) #20	TSPAN33 (ENSCPOG00000026557) #21	SMO (ENSCPOG00000013127) #22	AHCYL2 (ENSCPOG00000021923) #23	STRIP2 (ENSCPOG00000025878) #24	NRF1 (ENSCPOG00000009384) #26	UBE2H (ENSCPOG00000030275) #27	ZC3HC1 (ENSCPOG00000014034) #28	KLHDC10 (ENSCPOG00000003674) #30	TMEM209 (ENSCPOG00000005795) #31	SSMEM1 (ENSCPOG00000023824) #32	CPA2 (ENSCPOG00000008445) #33	CPA4 (ENSCPOG00000035526) #35	CPA5 (ENSCPOG00000014746) #36	CPA1 (ENSCPOG00000032659) #37	ENSCPOG00000014753	MEST (ENSCPOG00000004663)
Naked mole-rat female	MODERN SPECIES	5	PRRT4 (ENSHGLG00000004653)	ENSHGLG00000003834 #7	ENSHGLG00000045038	GARIN1A (ENSHGLG00000013393) #9	GARIN1B (ENSHGLG00000014946) #10	OPN1SW (ENSHGLG00000012102) #12	ENSHGLG00000017204 #11	CCDC136 (ENSHGLG00000010818) #13	FLNC (ENSHGLG00000007789) #18	ENSHGLG00000003789 #15	ATP6V1FNB (ENSHGLG00000045075) #16	IRF5 (ENSHGLG00000008448) #19	TNPO3 (ENSHGLG00000004463) #20	ENSHGLG00000032102	TSPAN33 (ENSHGLG00000004629) #21	SMO (ENSHGLG00000004118) #22	AHCYL2 (ENSHGLG00000007569) #23	STRIP2 (ENSHGLG00000003806) #24	ENSHGLG00000026519 #25	NRF1 (ENSHGLG00000005939) #26	UBE2H (ENSHGLG00000033292) #27	ZC3HC1 (ENSHGLG00000005085) #28	ENSHGLG00000004200	KLHDC10 (ENSHGLG00000039550) #30	TMEM209 (ENSHGLG00000007175) #31	SSMEM1 (ENSHGLG00000005378) #32	CPA2 (ENSHGLG00000004207) #33	CPA4 (ENSHGLG00000003441) #35	CPA5 (ENSHGLG00000007985) #36	CPA1 (ENSHGLG00000015959) #37	CEP41 (ENSHGLG00000018237)
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Marmotini	ANCESTRAL SPECIES	32													ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Marmotini_b	ANCESTRAL SPECIES	132													ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086.g #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Arctic ground squirrel	MODERN SPECIES	109													IRF5 (ENSUPAG00010001403) #19	TNPO3 (ENSUPAG00010001442) #20	TSPAN33 (ENSUPAG00010001630) #21	SMO (ENSUPAG00010001658) #22	AHCYL2 (ENSUPAG00010001678) #23	STRIP2 (ENSUPAG00010002118) #24	SMKR1 (ENSUPAG00010002197) #25	NRF1 (ENSUPAG00010002199) #26	UBE2H (ENSUPAG00010002460) #27	ZC3HC1 (ENSUPAG00010002473) #28	KLHDC10 (ENSUPAG00010002515) #30	TMEM209 (ENSUPAG00010002549) #31	SSMEM1 (ENSUPAG00010002633) #32	CPA2 (ENSUPAG00010002638) #33	CPA4 (ENSUPAG00010002661) #35	CPA5 (ENSUPAG00010002674) #36	CPA1 (ENSUPAG00010002706) #37	CEP41 (ENSUPAG00010002725)	ENSUPAG00010002772
Squirrel	MODERN SPECIES	179													IRF5 (ENSSTOG00000004858) #19	TNPO3 (ENSSTOG00000004885) #20	TSPAN33 (ENSSTOG00000011422) #21	SMO (ENSSTOG00000011435) #22	ENSSTOG00000033240	ENSSTOG00000005314 #23	STRIP2 (ENSSTOG00000005346) #24	SMKR1 (ENSSTOG00000027079) #25	ENSSTOG00000033916	ENSSTOG00000030292	NRF1 (ENSSTOG00000008238) #26	UBE2H (ENSSTOG00000023894) #27	ENSSTOG00000015389 #28	KLHDC10 (ENSSTOG00000015393) #30	TMEM209 (ENSSTOG00000009206) #31	CPA2 (ENSSTOG00000009214) #33	CPA4 (ENSSTOG00000009222) #35	CPA5 (ENSSTOG00000009234) #36	CPA1 (ENSSTOG00000009248) #37
Alpin marmot	MODERN SPECIES	35														IRF5 (ENSMMMG00000014159) #19	TNPO3 (ENSMMMG00000014093) #20	SMO (ENSMMMG00000014036) #22	AHCYL2 (ENSMMMG00000013818) #23	ENSMMMG00000013797	STRIP2 (ENSMMMG00000013720) #24	SMKR1 (ENSMMMG00000013716) #25	ENSMMMG00000013703	NRF1 (ENSMMMG00000013648) #26	UBE2H (ENSMMMG00000013629) #27	ZC3HC1 (ENSMMMG00000013589) #28	KLHDC10 (ENSMMMG00000013575) #30	TMEM209 (ENSMMMG00000013452) #31	SSMEM1 (ENSMMMG00000013444) #32	CPA2 (ENSMMMG00000013424) #33	CPA4 (ENSMMMG00000013409) #35	CPA5 (ENSMMMG00000013373) #36	CPA1 (ENSMMMG00000013359) #37
Eurasian red squirrel	MODERN SPECIES	17	IMPDH1 (ENSSVLG00005006574) #7	ENSSVLG00005006479	HILPDA (ENSSVLG00005006462)	GARIN1A (ENSSVLG00005006434) #9	GARIN1B (ENSSVLG00005006383) #10	ENSSVLG00005006280 #11	OPN1SW (ENSSVLG00005006222) #12	CCDC136 (ENSSVLG00005006165) #13	FLNC (ENSSVLG00005006076) #18	ATP6V1F (ENSSVLG00005006014) #15	ATP6V1FNB (ENSSVLG00005005988) #16	KCP (ENSSVLG00005005808) #17	IRF5 (ENSSVLG00005005731) #19	TNPO3 (ENSSVLG00005005607) #20	TSPAN33 (ENSSVLG00005005565) #21	SMO (ENSSVLG00005005533) #22	AHCYL2 (ENSSVLG00005005255) #23	STRIP2 (ENSSVLG00005005033) #24	SMKR1 (ENSSVLG00005004987) #25	ENSSVLG00005004972	ENSSVLG00005004958	MORN2 (ENSSVLG00005004940)	ENSSVLG00005004882 #26	ENSSVLG00005004823 #27	ZC3HC1 (ENSSVLG00005004754) #28	KLHDC10 (ENSSVLG00005004710) #30	TMEM209 (ENSSVLG00005004655) #31	SSMEM1 (ENSSVLG00005004627) #32	CPA2 (ENSSVLG00005004576) #33	CPA4 (ENSSVLG00005023082) #35	CPA5 (ENSSVLG00005022953) #36
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Muroidea	ANCESTRAL SPECIES	8	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Chinese hamster chok1gshd	MODERN SPECIES	54	Prrt4 (ENSCGRG00001020242)	Impdh1 (ENSCGRG00001000560) #7	Hilpda (ENSCGRG00001012150)	Garin1a (ENSCGRG00001000260) #9	Garin1b (ENSCGRG00001009768) #10	Calu (ENSCGRG00001002862) #11	Opn1sw (ENSCGRG00001021579) #12	Ccdc136 (ENSCGRG00001020446) #13	Flnc (ENSCGRG00001005204) #18	Atp6v1f (ENSCGRG00001000425) #15	Atp6v1fnb (ENSCGRG00001009659) #16	Kcp (ENSCGRG00001000457) #17	Irf5 (ENSCGRG00001024087) #19	Tnpo3 (ENSCGRG00001015925) #20	Tspan33 (ENSCGRG00001009176) #21	Smo (ENSCGRG00001018496) #22	ENSCGRG00001020487	Ahcyl2 (ENSCGRG00001022625) #23	Strip2 (ENSCGRG00001010227) #24	Nrf1 (ENSCGRG00001000193) #26	Ube2h (ENSCGRG00001022582) #27	Zc3hc1 (ENSCGRG00001018805) #28	Klhdc10 (ENSCGRG00001004463) #30	Tmem209 (ENSCGRG00001002879) #31	Ssmem1 (ENSCGRG00001010106) #32	Cpa2 (ENSCGRG00001017999) #33	Cpa4 (ENSCGRG00001018769) #35	Cpa5 (ENSCGRG00001017275) #36	Cpa1 (ENSCGRG00001015239) #37	Cep41 (ENSCGRG00001003484)	Copg2 (ENSCGRG00001020010)
Golden Hamster	MODERN SPECIES	696	ENSMAUG00000003832	Lep (ENSMAUG00000020902)	Rbm28 (ENSMAUG00000002263)	Prrt4 (ENSMAUG00000017303)	Impdh1 (ENSMAUG00000000330) #7	Hilpda (ENSMAUG00000007190)	Garin1a (ENSMAUG00000017274) #9	Garin1b (ENSMAUG00000006473) #10	Calu (ENSMAUG00000021758) #11	Ccdc136 (ENSMAUG00000018087) #13	Flnc (ENSMAUG00000020611) #18	Kcp (ENSMAUG00000000549) #17	Irf5 (ENSMAUG00000021057) #19	Tnpo3 (ENSMAUG00000013463) #20	Tspan33 (ENSMAUG00000000982) #21	Smo (ENSMAUG00000010178) #22	ENSMAUG00000000831	Ahcyl2 (ENSMAUG00000020224) #23	Strip2 (ENSMAUG00000010657) #24	Nrf1 (ENSMAUG00000006206) #26	Ube2h (ENSMAUG00000021238) #27	Zc3hc1 (ENSMAUG00000017032) #28
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Northern American deer mouse	MODERN SPECIES	16	Rbm28 (ENSPEMG00000020673)	Prrt4 (ENSPEMG00000016516)	Impdh1 (ENSPEMG00000014779) #7	Hilpda (ENSPEMG00000027655)	Garin1b (ENSPEMG00000020844) #10	Calu (ENSPEMG00000000768) #11	Opn1sw (ENSPEMG00000013155) #12	Ccdc136 (ENSPEMG00000020774) #13	Flnc (ENSPEMG00000021414) #18	Atp6v1f (ENSPEMG00000020693) #15	Atp6v1fnb (ENSPEMG00000022286) #16	ENSPEMG00000026469	Irf5 (ENSPEMG00000020544) #19	Tnpo3 (ENSPEMG00000000422) #20	Tspan33 (ENSPEMG00000020688) #21	Smo (ENSPEMG00000021296) #22	Ahcyl2 (ENSPEMG00000022072) #23	Strip2 (ENSPEMG00000020937) #24	ENSPEMG00000030083 #25	Nrf1 (ENSPEMG00000023041) #26	Ube2h (ENSPEMG00000022383) #27	Zc3hc1 (ENSPEMG00000000514) #28	Klhdc10 (ENSPEMG00000031304) #30	Tmem209 (ENSPEMG00000021645) #31	Ssmem1 (ENSPEMG00000022855) #32	Cpa2 (ENSPEMG00000021462) #33	Cpa4 (ENSPEMG00000022530) #35	Cpa5 (ENSPEMG00000022348) #36	Cpa1 (ENSPEMG00000022863) #37	Cep41 (ENSPEMG00000022114)	Mest (ENSPEMG00000000992)
Prairie vole	MODERN SPECIES	87	Prrt4 (ENSMOCG00000020766)	Impdh1 (ENSMOCG00000008218) #7	Hilpda (ENSMOCG00000001096)	Garin1a (ENSMOCG00000010184) #9	Garin1b (ENSMOCG00000017381) #10	Calu (ENSMOCG00000015931) #11	Opn1sw (ENSMOCG00000018662) #12	Ccdc136 (ENSMOCG00000007022) #13	Flnc (ENSMOCG00000009597) #18	ENSMOCG00000000103 #15	Atp6v1fnb (ENSMOCG00000013967) #16	Kcp (ENSMOCG00000008202) #17	Irf5 (ENSMOCG00000003344) #19	Tnpo3 (ENSMOCG00000013264) #20	Tspan33 (ENSMOCG00000021014) #21	Smo (ENSMOCG00000019933) #22	Ahcyl2 (ENSMOCG00000016157) #23	Strip2 (ENSMOCG00000012799) #24	Nrf1 (ENSMOCG00000011585) #26	Ube2h (ENSMOCG00000017439) #27	Zc3hc1 (ENSMOCG00000015239) #28	Klhdc10 (ENSMOCG00000021616) #30	Tmem209 (ENSMOCG00000023011) #31	Ssmem1 (ENSMOCG00000015403) #32	Cpa2 (ENSMOCG00000019742) #33	Cpa4 (ENSMOCG00000020370) #35	Cpa5 (ENSMOCG00000004361) #36	Cpa1 (ENSMOCG00000002910) #37	Cep41 (ENSMOCG00000013323)	ENSMOCG00000012216	Copg2 (ENSMOCG00000022112)
Murinae	ANCESTRAL SPECIES	4	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Mus	ANCESTRAL SPECIES	20	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Mus_A	ANCESTRAL SPECIES	7	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Mus_B	ANCESTRAL SPECIES	20	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Mus_C	ANCESTRAL SPECIES	19	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
spretus	MODERN SPECIES	15	Prrt4 (MGP_SPRETEiJ_G0029163)	Impdh1 (MGP_SPRETEiJ_G0029164) #7	Hilpda (MGP_SPRETEiJ_G0029165)	Garin1a (MGP_SPRETEiJ_G0029166) #9	Garin1b (MGP_SPRETEiJ_G0029167) #10	Calu (MGP_SPRETEiJ_G0029168) #11	Opn1sw (MGP_SPRETEiJ_G0029169) #12	Ccdc136 (MGP_SPRETEiJ_G0029170) #13	Flnc (MGP_SPRETEiJ_G0029171) #18	Atp6v1f (MGP_SPRETEiJ_G0029172) #15	Atp6v1fnb (MGP_SPRETEiJ_G0029173) #16	Kcp (MGP_SPRETEiJ_G0029174) #17	Irf5 (MGP_SPRETEiJ_G0029175) #19	Tnpo3 (MGP_SPRETEiJ_G0029176) #20	Tspan33 (MGP_SPRETEiJ_G0029177) #21	Smo (MGP_SPRETEiJ_G0029178) #22	Ahcyl2 (MGP_SPRETEiJ_G0029179) #23	Strip2 (MGP_SPRETEiJ_G0029180) #24	Nrf1 (MGP_SPRETEiJ_G0029181) #26	Ube2h (MGP_SPRETEiJ_G0029182) #27	Zc3hc1 (MGP_SPRETEiJ_G0029183) #28	Klhdc10 (MGP_SPRETEiJ_G0029184) #30	Tmem209 (MGP_SPRETEiJ_G0029185) #31	Ssmem1 (MGP_SPRETEiJ_G0029186) #32	Cpa2 (MGP_SPRETEiJ_G0029187) #33	Cpa4 (MGP_SPRETEiJ_G0029188) #35	Cpa5 (MGP_SPRETEiJ_G0029189) #36	Cpa1 (MGP_SPRETEiJ_G0029190) #37	Cep41 (MGP_SPRETEiJ_G0029191)	Mest (MGP_SPRETEiJ_G0029192)	Copg2 (MGP_SPRETEiJ_G0029193)
Steppe mouse	MODERN SPECIES	3280	Rbm28 (ENSMSIG00000025020)	Prrt4 (ENSMSIG00000025011)	Impdh1 (ENSMSIG00000024596) #7	Hilpda (ENSMSIG00000024578)	Garin1a (ENSMSIG00000024563) #9	Garin1b (ENSMSIG00000024512) #10	Calu (ENSMSIG00000024426) #11	Opn1sw (ENSMSIG00000024409) #12	Ccdc136 (ENSMSIG00000024178) #13	Flnc (ENSMSIG00000024004) #18	Atp6v1f (ENSMSIG00000023998) #15	Atp6v1fnb (ENSMSIG00000023991) #16	Irf5 (ENSMSIG00000023744) #19	Tnpo3 (ENSMSIG00000023671) #20	Tspan33 (ENSMSIG00000023646) #21	Smo (ENSMSIG00000023624) #22	Ahcyl2 (ENSMSIG00000023522) #23	Strip2 (ENSMSIG00000023355) #24	ENSMSIG00000023350 #25	Nrf1 (ENSMSIG00000022240) #26	Ube2h (ENSMSIG00000022142) #27	Zc3hc1 (ENSMSIG00000021880) #28	Klhdc10 (ENSMSIG00000021851) #30	Tmem209 (ENSMSIG00000021763) #31	Ssmem1 (ENSMSIG00000021722) #32	Cpa2 (ENSMSIG00000021716) #33	Cpa4 (ENSMSIG00000021689) #35	Cpa5 (ENSMSIG00000021613) #36	Cpa1 (ENSMSIG00000021603) #37	Cep41 (ENSMSIG00000021536)	Mest (ENSMSIG00000021483)
Mouse	MODERN SPECIES	15	Prrt4 (ENSMUSG00000079654)	Impdh1 (ENSMUSG00000003500) #7	Hilpda (ENSMUSG00000043421)	Garin1a (ENSMUSG00000079652) #9	Garin1b (ENSMUSG00000039742) #10	Calu (ENSMUSG00000029767) #11	Opn1sw (ENSMUSG00000058831) #12	Ccdc136 (ENSMUSG00000029769) #13	Flnc (ENSMUSG00000068699) #18	Atp6v1f (ENSMUSG00000004285) #15	Atp6v1fnb (ENSMUSG00000090685) #16	Kcp (ENSMUSG00000059022) #17	Irf5 (ENSMUSG00000029771) #19	Tnpo3 (ENSMUSG00000012535) #20	Tspan33 (ENSMUSG00000001763) #21	Smo (ENSMUSG00000001761) #22	Ahcyl2 (ENSMUSG00000029772) #23	Strip2 (ENSMUSG00000039629) #24	Nrf1 (ENSMUSG00000058440) #26	Ube2h (ENSMUSG00000039159) #27	Zc3hc1 (ENSMUSG00000039130) #28	Klhdc10 (ENSMUSG00000029775) #30	Tmem209 (ENSMUSG00000029782) #31	Ssmem1 (ENSMUSG00000029784) #32	Cpa2 (ENSMUSG00000071553) #33	Cpa4 (ENSMUSG00000039070) #35	Cpa5 (ENSMUSG00000029788) #36	Cpa1 (ENSMUSG00000054446) #37	Cep41 (ENSMUSG00000029790)	Mest (ENSMUSG00000051855)	Copg2 (ENSMUSG00000025607)
Ryukyu mouse	MODERN SPECIES	15	Prrt4 (MGP_CAROLIEiJ_G0028163)	Impdh1 (MGP_CAROLIEiJ_G0028164) #7	Hilpda (MGP_CAROLIEiJ_G0028165)	Garin1a (MGP_CAROLIEiJ_G0028166) #9	Garin1b (MGP_CAROLIEiJ_G0028167) #10	Calu (MGP_CAROLIEiJ_G0028168) #11	Opn1sw (MGP_CAROLIEiJ_G0028169) #12	Ccdc136 (MGP_CAROLIEiJ_G0028170) #13	Flnc (MGP_CAROLIEiJ_G0028171) #18	Atp6v1f (MGP_CAROLIEiJ_G0028172) #15	Atp6v1fnb (MGP_CAROLIEiJ_G0028173) #16	Kcp (MGP_CAROLIEiJ_G0028174) #17	Irf5 (MGP_CAROLIEiJ_G0028175) #19	Tnpo3 (MGP_CAROLIEiJ_G0028176) #20	Tspan33 (MGP_CAROLIEiJ_G0028177) #21	Smo (MGP_CAROLIEiJ_G0028178) #22	Ahcyl2 (MGP_CAROLIEiJ_G0028179) #23	Strip2 (MGP_CAROLIEiJ_G0028180) #24	Nrf1 (MGP_CAROLIEiJ_G0028181) #26	Ube2h (MGP_CAROLIEiJ_G0028182) #27	Zc3hc1 (MGP_CAROLIEiJ_G0028183) #28	Klhdc10 (MGP_CAROLIEiJ_G0028184) #30	Tmem209 (MGP_CAROLIEiJ_G0028185) #31	Ssmem1 (MGP_CAROLIEiJ_G0028186) #32	Cpa2 (MGP_CAROLIEiJ_G0028187) #33	Cpa4 (MGP_CAROLIEiJ_G0028188) #35	Cpa5 (MGP_CAROLIEiJ_G0028189) #36	Cpa1 (MGP_CAROLIEiJ_G0028190) #37	Cep41 (MGP_CAROLIEiJ_G0028191)	Mest (MGP_CAROLIEiJ_G0028192)	Copg2 (MGP_CAROLIEiJ_G0028193)
Shrew mouse	MODERN SPECIES	11	Hilpda (MGP_PahariEiJ_G0021923)	Garin1a (MGP_PahariEiJ_G0021924) #9	Garin1b (MGP_PahariEiJ_G0021925) #10	Calu (MGP_PahariEiJ_G0021926) #11	Opn1sw (MGP_PahariEiJ_G0021927) #12	Ccdc136 (MGP_PahariEiJ_G0021928) #13	Flnc (MGP_PahariEiJ_G0021929) #18	Atp6v1f (MGP_PahariEiJ_G0021930) #15	Atp6v1fnb (MGP_PahariEiJ_G0021931) #16	Kcp (MGP_PahariEiJ_G0021932) #17	Irf5 (MGP_PahariEiJ_G0021933) #19	Tnpo3 (MGP_PahariEiJ_G0021934) #20	Tspan33 (MGP_PahariEiJ_G0021935) #21	MGP_PahariEiJ_G0002043	MGP_PahariEiJ_G0002044	Smo (MGP_PahariEiJ_G0021936) #22	Ahcyl2 (MGP_PahariEiJ_G0021937) #23	Strip2 (MGP_PahariEiJ_G0021938) #24	Nrf1 (MGP_PahariEiJ_G0021939) #26	Ube2h (MGP_PahariEiJ_G0021940) #27	Zc3hc1 (MGP_PahariEiJ_G0021941) #28	Klhdc10 (MGP_PahariEiJ_G0021942) #30	Tmem209 (MGP_PahariEiJ_G0021943) #31	Ssmem1 (MGP_PahariEiJ_G0021944) #32	Cpa2 (MGP_PahariEiJ_G0021945) #33	Cpa4 (MGP_PahariEiJ_G0021946) #35	Cpa5 (MGP_PahariEiJ_G0021947) #36	Cpa1 (MGP_PahariEiJ_G0021948) #37	Cep41 (MGP_PahariEiJ_G0021949)	Mest (MGP_PahariEiJ_G0021950)	Copg2 (MGP_PahariEiJ_G0021951)
Rat	MODERN SPECIES	14	Rbm28 (ENSRNOG00000005468)	Prrt4 (ENSRNOG00000039388)	Impdh1 (ENSRNOG00000020032) #7	Garin1a (ENSRNOG00000039383) #9	Garin1b (ENSRNOG00000006132) #10	Calu (ENSRNOG00000006197) #11	Opn1sw (ENSRNOG00000006874) #12	Ccdc136 (ENSRNOG00000007100) #13	Flnc (ENSRNOG00000007281) #18	Atp6v1fnb (ENSRNOG00000063021) #16	ENSRNOG00000065235 #15	Kcp (ENSRNOG00000021855) #17	Irf5 (ENSRNOG00000007437) #19	Tnpo3 (ENSRNOG00000021758) #20	Tspan33 (ENSRNOG00000007900) #21	Smo (ENSRNOG00000008332) #22	Ahcyl2 (ENSRNOG00000039300) #23	Strip2 (ENSRNOG00000057729) #24	Smkr1 (ENSRNOG00000070702) #25	Nrf1 (ENSRNOG00000008752) #26	Ube2h (ENSRNOG00000048205) #27	Zc3hc1 (ENSRNOG00000010154) #28	Klhdc10 (ENSRNOG00000010267) #30	Tmem209 (ENSRNOG00000028219) #31	Ssmem1 (ENSRNOG00000010345) #32	Cpa2 (ENSRNOG00000028092) #33	Cpa4 (ENSRNOG00000010463) #35	Cpa5 (ENSRNOG00000010467) #36	Cpa1 (ENSRNOG00000010725) #37	Cep41 (ENSRNOG00000010950)	Mest (ENSRNOG00000048088)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1325	Prrt4 (ENSNGAG00000018200)	Impdh1 (ENSNGAG00000005531) #7	Hilpda (ENSNGAG00000016167)	Garin1a (ENSNGAG00000010614) #9	Garin1b (ENSNGAG00000007899) #10	Calu (ENSNGAG00000004067) #11	Opn1sw (ENSNGAG00000018986) #12	Ccdc136 (ENSNGAG00000000731) #13	Flnc (ENSNGAG00000002362) #18	ENSNGAG00000016731 #15	Atp6v1fnb (ENSNGAG00000015077) #16	Kcp (ENSNGAG00000013806) #17	Irf5 (ENSNGAG00000016077) #19	Tnpo3 (ENSNGAG00000008722) #20	Tspan33 (ENSNGAG00000002066) #21	Smo (ENSNGAG00000019312) #22	Ahcyl2 (ENSNGAG00000018717) #23	Strip2 (ENSNGAG00000016151) #24	Nrf1 (ENSNGAG00000010100) #26	Ube2h (ENSNGAG00000011195) #27	Zc3hc1 (ENSNGAG00000019014) #28	Klhdc10 (ENSNGAG00000015572) #30	Tmem209 (ENSNGAG00000005025) #31	Ssmem1 (ENSNGAG00000011433) #32	Cpa2 (ENSNGAG00000013955) #33	Cpa4 (ENSNGAG00000000324) #35	Cpa5 (ENSNGAG00000016083) #36	Cpa1 (ENSNGAG00000014263) #37	ENSNGAG00000018926	ENSNGAG00000010883	Mest (ENSNGAG00000003658)
Lesser Egyptian jerboa	MODERN SPECIES	81						Garin1b (ENSJJAG00000011943) #10	Calu (ENSJJAG00000019710) #11	Opn1sw (ENSJJAG00000000331) #12	ENSJJAG00000023327 #13	Flnc (ENSJJAG00000017159) #18	Atp6v1f (ENSJJAG00000023984) #15	Atp6v1fnb (ENSJJAG00000023149) #16	Irf5 (ENSJJAG00000018231) #19	Tnpo3 (ENSJJAG00000013530) #20	Tspan33 (ENSJJAG00000002952) #21	Smo (ENSJJAG00000000655) #22	Ahcyl2 (ENSJJAG00000009214) #23	Strip2 (ENSJJAG00000021639) #24	ENSJJAG00000008041 #26	Klhdc10 (ENSJJAG00000012472) #30	ENSJJAG00000012506 #31	Ssmem1 (ENSJJAG00000023921) #32	Cpa4 (ENSJJAG00000000289) #35	Cep41 (ENSJJAG00000017848)	Klf14 (ENSJJAG00000022216)	ENSJJAG00000020373	ENSJJAG00000017895	ENSJJAG00000012178	Plxna4 (ENSJJAG00000003212)	Chchd3 (ENSJJAG00000018487)	Exoc4 (ENSJJAG00000012752)
Kangaroo rat	MODERN SPECIES	367	ENSDORG00000028147	Prrt4 (ENSDORG00000028011)	Impdh1 (ENSDORG00000015870) #7	Garin1a (ENSDORG00000010506) #9	Garin1b (ENSDORG00000007174) #10	Calu (ENSDORG00000015990) #11	Opn1sw (ENSDORG00000015986) #12	Ccdc136 (ENSDORG00000011103) #13	Flnc (ENSDORG00000011105) #18	Atp6v1f (ENSDORG00000028428) #15	Atp6v1fnb (ENSDORG00000026486) #16	Kcp (ENSDORG00000015865) #17	Irf5 (ENSDORG00000010627) #19	Tnpo3 (ENSDORG00000002433) #20	Tspan33 (ENSDORG00000006516) #21	Smo (ENSDORG00000005306) #22	ENSDORG00000027273	Ahcyl2 (ENSDORG00000013584) #23	Strip2 (ENSDORG00000004127) #24	Nrf1 (ENSDORG00000016661) #26
Lagomorpha	ANCESTRAL SPECIES	24	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.`b #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Rabbit	MODERN SPECIES	18	HILPDA (ENSOCUG00000011823)	ENSOCUG00000013266	GARIN1A (ENSOCUG00000013274) #9	GARIN1B (ENSOCUG00000008160) #10	CALU (ENSOCUG00000008167) #11	OPN1SW (ENSOCUG00000008173) #12	CCDC136 (ENSOCUG00000008182) #13	FLNC (ENSOCUG00000011942) #18	ENSOCUG00000014136 #15	ATP6V1FNB (ENSOCUG00000032998) #16	KCP (ENSOCUG00000017565) #17	IRF5 (ENSOCUG00000010101) #19	TNPO3 (ENSOCUG00000010105) #20	TSPAN33 (ENSOCUG00000013168) #21	ENSOCUG00000027421	SMO (ENSOCUG00000013176) #22	AHCYL2 (ENSOCUG00000011749) #23	STRIP2 (ENSOCUG00000008316) #24	ENSOCUG00000037307	SMKR1 (ENSOCUG00000036751) #25	NRF1 (ENSOCUG00000012174) #26	UBE2H (ENSOCUG00000013054) #27	ZC3HC1 (ENSOCUG00000017137) #28	KLHDC10 (ENSOCUG00000001699) #30	TMEM209 (ENSOCUG00000010253) #31	SSMEM1 (ENSOCUG00000000151) #32	CPA2 (ENSOCUG00000006983) #33	CPA4 (ENSOCUG00000029139) #35	CPA5 (ENSOCUG00000006993) #36	CPA1 (ENSOCUG00000007001) #37	CEP41 (ENSOCUG00000007004)
Pika	MODERN SPECIES	2522															ENSOPRG00000009005 #21	SMO (ENSOPRG00000009021) #22
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00390000014201	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Eulipotyphla	DUPLICATION
Eulipotyphla	ANCESTRAL SPECIES	282															ENSGT00940000159484 #21	ENSGT00940000157206.m #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24
Common shrew	MODERN SPECIES	4020															ENSSARG00000014482 #21	ENSSARG00000014486 #22	ENSSARG00000014489 #23
Hedgehog	MODERN SPECIES	2646																SMO (ENSEEUG00000000874) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157206.n #22
Common shrew	MODERN SPECIES	6949																ENSSARG00000009131 #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00390000014201	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Suina	ANCESTRAL SPECIES	19	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Pig	MODERN SPECIES	9	IMPDH1 (ENSSSCG00000016585) #7	HILPDA (ENSSSCG00000031109)	GARIN1A (ENSSSCG00000016583) #9	GARIN1B (ENSSSCG00000016582) #10	CALU (ENSSSCG00000016581) #11	OPN1SW (ENSSSCG00000016580) #12	CCDC136 (ENSSSCG00000016579) #13	FLNC (ENSSSCG00000016578) #18	ATP6V1F (ENSSSCG00000016577) #15	ATP6V1FNB (ENSSSCG00000023540) #16	KCP (ENSSSCG00000016574) #17	IRF5 (ENSSSCG00000016573) #19	ENSSSCG00000016571	TNPO3 (ENSSSCG00000016572) #20	TSPAN33 (ENSSSCG00000016570) #21	SMO (ENSSSCG00000016569) #22	AHCYL2 (ENSSSCG00000016568) #23	STRIP2 (ENSSSCG00000016567) #24	SMKR1 (ENSSSCG00000062966) #25	NRF1 (ENSSSCG00000016566) #26	UBE2H (ENSSSCG00000016564) #27	ZC3HC1 (ENSSSCG00000016565) #28	KLHDC10 (ENSSSCG00000027131) #30	TMEM209 (ENSSSCG00000016563) #31	SSMEM1 (ENSSSCG00000016562) #32	CPA2 (ENSSSCG00000016559) #33	CPA4 (ENSSSCG00000016555) #35	CPA5 (ENSSSCG00000054055) #36	CPA1 (ENSSSCG00000016557) #37	CEP41 (ENSSSCG00000016556)	MEST (ENSSSCG00000016554)
Chacoan peccary	MODERN SPECIES	72	PRRT4 (ENSCWAG00000003635)	IMPDH1 (ENSCWAG00000003659) #7	ENSCWAG00000003747	GARIN1A (ENSCWAG00000003763) #9	GARIN1B (ENSCWAG00000003788) #10	CALU (ENSCWAG00000003815) #11	OPN1SW (ENSCWAG00000003868) #12	CCDC136 (ENSCWAG00000003906) #13	FLNC (ENSCWAG00000004035) #18	ATP6V1F (ENSCWAG00000004495) #15	ATP6V1FNB (ENSCWAG00000004520) #16	KCP (ENSCWAG00000004551) #17	IRF5 (ENSCWAG00000004691) #19	TNPO3 (ENSCWAG00000004965) #20	TSPAN33 (ENSCWAG00000005089) #21	SMO (ENSCWAG00000005138) #22	AHCYL2 (ENSCWAG00000005284) #23	STRIP2 (ENSCWAG00000006015) #24	ENSCWAG00000006167 #25	NRF1 (ENSCWAG00000006180) #26	UBE2H (ENSCWAG00000006246) #27	ZC3HC1 (ENSCWAG00000006305) #28	KLHDC10 (ENSCWAG00000006359) #30	TMEM209 (ENSCWAG00000006430) #31	SSMEM1 (ENSCWAG00000006579) #32	CPA2 (ENSCWAG00000006613) #33	CPA4 (ENSCWAG00000006673) #35	CPA5 (ENSCWAG00000006868) #36	CPA1 (ENSCWAG00000007000) #37	CEP41 (ENSCWAG00000007078)	MEST (ENSCWAG00000007152)
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Camelidae	ANCESTRAL SPECIES	2	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Alpaca	MODERN SPECIES	1344															TSPAN33 (ENSVPAG00000004734) #21	SMO (ENSVPAG00000004735) #22	AHCYL2 (ENSVPAG00000004736) #23	STRIP2 (ENSVPAG00000004738) #24	NRF1 (ENSVPAG00000004741) #26
Arabian camel	MODERN SPECIES	33	ENSCDRG00005005987	IMPDH1 (ENSCDRG00005006025) #7	ENSCDRG00005006285	GARIN1A (ENSCDRG00005006296) #9	GARIN1B (ENSCDRG00005006342) #10	CALU (ENSCDRG00005006437) #11	OPN1SW (ENSCDRG00005006689) #12	CCDC136 (ENSCDRG00005006752) #13	FLNC (ENSCDRG00005006906) #18	ATP6V1F (ENSCDRG00005007832) #15	ATP6V1FNB (ENSCDRG00005007847) #16	KCP (ENSCDRG00005007916) #17	IRF5 (ENSCDRG00005009623) #19	TNPO3 (ENSCDRG00005009872) #20	TSPAN33 (ENSCDRG00005000117) #21	ENSCDRG00005000133 #22	AHCYL2 (ENSCDRG00005000196) #23	STRIP2 (ENSCDRG00005000481) #24	SMKR1 (ENSCDRG00005000557) #25	NRF1 (ENSCDRG00005000576) #26	UBE2H (ENSCDRG00005000616) #27	ZC3HC1 (ENSCDRG00005000669) #28	KLHDC10 (ENSCDRG00005000735) #30	TMEM209 (ENSCDRG00005000793) #31	SSMEM1 (ENSCDRG00005000869) #32	CPA2 (ENSCDRG00005000890) #33	CPA4 (ENSCDRG00005000947) #35	CPA5 (ENSCDRG00005001058) #36	CPA1 (ENSCDRG00005001124) #37	CEP41 (ENSCDRG00005001191)	MEST (ENSCDRG00005001231)
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Cetacea	ANCESTRAL SPECIES	13	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.s
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.s
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.s
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.s	ENSGT00390000016313.a.a
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602.s.a	ENSGT00390000016313.a.a
Narwhal	MODERN SPECIES	306	ENSMMNG00015005468 #7	HILPDA (ENSMMNG00015005632)	GARIN1A (ENSMMNG00015005649) #9	GARIN1B (ENSMMNG00015005673) #10	CALU (ENSMMNG00015005726) #11	OPN1SW (ENSMMNG00015005791) #12	ENSMMNG00015005806	CCDC136 (ENSMMNG00015005873) #13	FLNC (ENSMMNG00015005978) #18	ATP6V1F (ENSMMNG00015006017) #15	ATP6V1FNB (ENSMMNG00015006027) #16	KCP (ENSMMNG00015006151) #17	IRF5 (ENSMMNG00015006384) #19	TNPO3 (ENSMMNG00015006506) #20	TSPAN33 (ENSMMNG00015006647) #21	SMO (ENSMMNG00015006671) #22	AHCYL2 (ENSMMNG00015006702) #23	STRIP2 (ENSMMNG00015006760) #24	SMKR1 (ENSMMNG00015006808) #25	NRF1 (ENSMMNG00015006846) #26	UBE2H (ENSMMNG00015006891) #27	ZC3HC1 (ENSMMNG00015006920) #28	KLHDC10 (ENSMMNG00015006953) #30	TMEM209 (ENSMMNG00015006971) #31	SSMEM1 (ENSMMNG00015007008) #32	CPA4 (ENSMMNG00015007033) #35	CPA5 (ENSMMNG00015007069) #36	CPA1 (ENSMMNG00015007177) #37	CEP41 (ENSMMNG00015007217)	ENSMMNG00015007263	COPG2 (ENSMMNG00015007333)
Beluga whale	MODERN SPECIES	72	PRRT4 (ENSDLEG00000012610)	ENSDLEG00000012587 #7	HILPDA (ENSDLEG00000012580)	GARIN1A (ENSDLEG00000012559) #9	FAM71F1 (ENSDLEG00000012548) #10	CALU (ENSDLEG00000012533) #11	OPN1SW (ENSDLEG00000012508) #12	CCDC136 (ENSDLEG00000012339) #13	FLNC (ENSDLEG00000012226) #18	ATP6V1F (ENSDLEG00000012202) #15	ATP6V1FNB (ENSDLEG00000012188) #16	KCP (ENSDLEG00000011415) #17	IRF5 (ENSDLEG00000011208) #19	TNPO3 (ENSDLEG00000011142) #20	TSPAN33 (ENSDLEG00000011119) #21	SMO (ENSDLEG00000011091) #22	AHCYL2 (ENSDLEG00000011027) #23	STRIP2 (ENSDLEG00000010900) #24	SMKR1 (ENSDLEG00000010881) #25	NRF1 (ENSDLEG00000010842) #26	UBE2H (ENSDLEG00000010770) #27	ZC3HC1 (ENSDLEG00000010726) #28	KLHDC10 (ENSDLEG00000010694) #30	TMEM209 (ENSDLEG00000010651) #31	SSMEM1 (ENSDLEG00000010634) #32	ENSDLEG00000010627 #35	CPA5 (ENSDLEG00000010545) #36	CPA1 (ENSDLEG00000010485) #37	CEP41 (ENSDLEG00000010461)	ENSDLEG00000010367	COPG2 (ENSDLEG00000010081)
Vaquita	MODERN SPECIES	20	PRRT4 (ENSPSNG00000019177)	ENSPSNG00000018846 #7	GARIN1A (ENSPSNG00000018600) #9	GARIN1B (ENSPSNG00000018506) #10	CALU (ENSPSNG00000018358) #11	OPN1SW (ENSPSNG00000018263) #12	ENSPSNG00000018193 #13	ENSPSNG00000018084 #13	FLNC (ENSPSNG00000017209) #18	ATP6V1F (ENSPSNG00000017061) #15	ATP6V1FNB (ENSPSNG00000017030) #16	KCP (ENSPSNG00000015668) #17	IRF5 (ENSPSNG00000015055) #19	TNPO3 (ENSPSNG00000014853) #20	TSPAN33 (ENSPSNG00000014660) #21	SMO (ENSPSNG00000014582) #22	AHCYL2 (ENSPSNG00000014033) #23	STRIP2 (ENSPSNG00000013854) #24	SMKR1 (ENSPSNG00000013780) #25	NRF1 (ENSPSNG00000013708) #26	UBE2H (ENSPSNG00000013546) #27	ZC3HC1 (ENSPSNG00000013318) #28	KLHDC10 (ENSPSNG00000013164) #30	TMEM209 (ENSPSNG00000012918) #31	SSMEM1 (ENSPSNG00000012794) #32	CPA4 (ENSPSNG00000012667) #35	CPA5 (ENSPSNG00000012409) #36	CPA1 (ENSPSNG00000012240) #37	CEP41 (ENSPSNG00000012101)	ENSPSNG00000011939	COPG2 (ENSPSNG00000011753)
Dolphin	MODERN SPECIES	1278															TSPAN33 (ENSTTRG00000008432) #21	SMO (ENSTTRG00000008437) #22	AHCYL2 (ENSTTRG00000008443) #23	STRIP2 (ENSTTRG00000008451) #24	NRF1 (ENSTTRG00000008455) #26	UBE2H (ENSTTRG00000008457) #27	ZC3HC1 (ENSTTRG00000008458) #28
Sperm whale	MODERN SPECIES	16	ENSPCTG00005002338	SND1 (ENSPCTG00005001983)	LEP (ENSPCTG00005001874)	ENSPCTG00005001867	RBM28 (ENSPCTG00005001842)	PRRT4 (ENSPCTG00005001828)	IMPDH1 (ENSPCTG00005001748) #7	HILPDA (ENSPCTG00005001716)	GARIN1A (ENSPCTG00005001694) #9	GARIN1B (ENSPCTG00005001671) #10	CALU (ENSPCTG00005001613) #11	OPN1SW (ENSPCTG00005001574) #12	ENSPCTG00005001560 #13	TNPO3 (ENSPCTG00005001428) #20	TSPAN33 (ENSPCTG00005001375) #21	SMO (ENSPCTG00005001356) #22	ENSPCTG00005001339	AHCYL2 (ENSPCTG00005001116) #23	STRIP2 (ENSPCTG00005001003) #24	SMKR1 (ENSPCTG00005000964) #25	NRF1 (ENSPCTG00005000937) #26	UBE2H (ENSPCTG00005000914) #27	ZC3HC1 (ENSPCTG00005000871) #28	KLHDC10 (ENSPCTG00005000848) #30	TMEM209 (ENSPCTG00005000822) #31	SSMEM1 (ENSPCTG00005000796) #32	CPA2 (ENSPCTG00005000773) #33	CPA4 (ENSPCTG00005000752) #35	CPA5 (ENSPCTG00005000705) #36	CPA1 (ENSPCTG00005000655) #37	CEP41 (ENSPCTG00005000570)
Blue whale	MODERN SPECIES	20	ENSBMSG00010005580	PRRT4 (ENSBMSG00010005567)	IMPDH1 (ENSBMSG00010005499) #7	GARIN1A (ENSBMSG00010005458) #9	GARIN1B (ENSBMSG00010005451) #10	CALU (ENSBMSG00010005429) #11	OPN1SW (ENSBMSG00010005408) #12	CCDC136 (ENSBMSG00010005379) #13	FLNC (ENSBMSG00010005264) #18	ATP6V1F (ENSBMSG00010005201) #15	ATP6V1FNB (ENSBMSG00010005193) #16	KCP (ENSBMSG00010005056) #17	IRF5 (ENSBMSG00010021438) #19	TNPO3 (ENSBMSG00010021371) #20	TSPAN33 (ENSBMSG00010021341) #21	SMO (ENSBMSG00010021316) #22	AHCYL2 (ENSBMSG00010021103) #23	STRIP2 (ENSBMSG00010021060) #24	SMKR1 (ENSBMSG00010021051) #25	NRF1 (ENSBMSG00010020977) #26	UBE2H (ENSBMSG00010020928) #27	ZC3HC1 (ENSBMSG00010020881) #28	KLHDC10 (ENSBMSG00010020845) #30	TMEM209 (ENSBMSG00010020795) #31	ENSBMSG00010020767 #32	CPA4 (ENSBMSG00010020743) #35	CPA5 (ENSBMSG00010020701) #36	CPA1 (ENSBMSG00010020661) #37	ENSBMSG00010020649	MEST (ENSBMSG00010020395)	COPG2 (ENSBMSG00010020346)
Pecora	ANCESTRAL SPECIES	11	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Percora_a	ANCESTRAL SPECIES	11	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Bovidae	ANCESTRAL SPECIES	12	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Caprinae	ANCESTRAL SPECIES	10	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Goat	MODERN SPECIES	23	IMPDH1 (ENSCHIG00000017941) #7	HILPDA (ENSCHIG00000009991)	GARIN1A (ENSCHIG00000018576) #9	GARIN1B (ENSCHIG00000023839) #10	CALU (ENSCHIG00000025549) #11	OPN1SW (ENSCHIG00000017473) #12	CCDC136 (ENSCHIG00000001208) #13	FLNC (ENSCHIG00000021055) #18	ENSCHIG00000008493 #15	ATP6V1FNB (ENSCHIG00000019543) #16	ENSCHIG00000008503	KCP (ENSCHIG00000011656) #17	IRF5 (ENSCHIG00000021193) #19	TNPO3 (ENSCHIG00000011721) #20	TSPAN33 (ENSCHIG00000021150) #21	SMO (ENSCHIG00000023137) #22	ENSCHIG00000023411	ENSCHIG00000022603	AHCYL2 (ENSCHIG00000019042) #23	STRIP2 (ENSCHIG00000008721) #24	SMKR1 (ENSCHIG00000008143) #25	NRF1 (ENSCHIG00000011640) #26	ENSCHIG00000022729 #27	ZC3HC1 (ENSCHIG00000014103) #28	KLHDC10 (ENSCHIG00000022726) #30	TMEM209 (ENSCHIG00000016704) #31	SSMEM1 (ENSCHIG00000010938) #32	CPA4 (ENSCHIG00000022208) #35	CPA5 (ENSCHIG00000016698) #36	CPA1 (ENSCHIG00000009711) #37	CEP41 (ENSCHIG00000015511)
Rambouillet Sheep	MODERN SPECIES	20	RBM28 (ENSOARG00020005071)	PRRT4 (ENSOARG00020005155)	IMPDH1 (ENSOARG00020005183) #7	HILPDA (ENSOARG00020005363)	FAM71F2 (ENSOARG00020005377) #9	GARIN1B (ENSOARG00020005402) #10	CALU (ENSOARG00020005456) #11	OPN1SW (ENSOARG00020005641) #12	FLNC (ENSOARG00020005793) #18	ATP6V1F (ENSOARG00020005878) #15	ATP6V1FNB (ENSOARG00020005898) #16	KCP (ENSOARG00020005935) #17	IRF5 (ENSOARG00020006152) #19	TNPO3 (ENSOARG00020006396) #20	TSPAN33 (ENSOARG00020006705) #21	SMO (ENSOARG00020006736) #22	AHCYL2 (ENSOARG00020006912) #23	STRIP2 (ENSOARG00020007865) #24	NRF1 (ENSOARG00020008138) #26	UBE2H (ENSOARG00020000266) #27	ZC3HC1 (ENSOARG00020000306) #28	KLHDC10 (ENSOARG00020000341) #30	TMEM209 (ENSOARG00020000377) #31	SSMEM1 (ENSOARG00020000408) #32	CPA4 (ENSOARG00020000441) #35	CPA5 (ENSOARG00020000544) #36	CPA1 (ENSOARG00020000624) #37	CEP41 (ENSOARG00020000683)	MEST (ENSOARG00020000738)	COPG2 (ENSOARG00020000807)	TSGA13 (ENSOARG00020000839)
Bovinae	ANCESTRAL SPECIES	8	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00940000154431.f.c.b	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000005102.f	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Bos	ANCESTRAL SPECIES	8	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027.b #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.ob #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00940000154431.f.c.b	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000005102.f	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.a.a.a.a	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37
Bos_a	ANCESTRAL SPECIES	12	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027.b #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.ob #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000005102.f	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.a.a.a.a	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Wild yak	MODERN SPECIES	1761					GARIN1B (ENSBMUG00000022914) #10	CALU (ENSBMUG00000022990) #11	OPN1SW (ENSBMUG00000022998) #12	CCDC136 (ENSBMUG00000023016) #13	FLNC (ENSBMUG00000023112) #18	ENSBMUG00000023139 #15	ATP6V1FNB (ENSBMUG00000023140) #16	KCP (ENSBMUG00000023263) #17	IRF5 (ENSBMUG00000023320) #19	TNPO3 (ENSBMUG00000023399) #20	TSPAN33 (ENSBMUG00000023441) #21	SMO (ENSBMUG00000023453) #22	AHCYL2 (ENSBMUG00000023493) #23	STRIP2 (ENSBMUG00000023516) #24	SMKR1 (ENSBMUG00000023521) #25	NRF1 (ENSBMUG00000023541) #26	ENSBMUG00000023568	UBE2H (ENSBMUG00000023579) #27	ZC3HC1 (ENSBMUG00000023629) #28	KLHDC10 (ENSBMUG00000023680) #30	TMEM209 (ENSBMUG00000023740) #31	SSMEM1 (ENSBMUG00000023749) #32	CPA4 (ENSBMUG00000023800) #35	CPA5 (ENSBMUG00000023849) #36	CPA1 (ENSBMUG00000023868) #37	CEP41 (ENSBMUG00000023916)	MEST (ENSBMUG00000023981)
Domestic yak	MODERN SPECIES	23	IMPDH1 (ENSBGRG00000022841) #7	ENSBGRG00000022825	ENSBGRG00000022817 #9	ENSBGRG00000022771 #9	GARIN1B (ENSBGRG00000022749) #10	CALU (ENSBGRG00000022337) #11	OPN1SW (ENSBGRG00000022278) #12	CCDC136 (ENSBGRG00000022169) #13	FLNC (ENSBGRG00000011802) #18	ENSBGRG00000011477 #15	ATP6V1FNB (ENSBGRG00000011423) #16	KCP (ENSBGRG00000010458) #17	IRF5 (ENSBGRG00000010195) #19	TNPO3 (ENSBGRG00000009809) #20	TSPAN33 (ENSBGRG00000009713) #21	SMO (ENSBGRG00000009570) #22	ENSBGRG00000009523	AHCYL2 (ENSBGRG00000008318) #23	STRIP2 (ENSBGRG00000008162) #24	SMKR1 (ENSBGRG00000008134) #25	NRF1 (ENSBGRG00000008004) #26	ENSBGRG00000007949	UBE2H (ENSBGRG00000007819) #27	ZC3HC1 (ENSBGRG00000007498) #28	KLHDC10 (ENSBGRG00000007183) #30	ENSBGRG00000006705	TMEM209 (ENSBGRG00000006532) #31	SSMEM1 (ENSBGRG00000006487) #32	ENSBGRG00000006475	CPA4 (ENSBGRG00000006101) #35	CPA5 (ENSBGRG00000005976) #36
Bos_b	ANCESTRAL SPECIES	7	ENSGT00730000111591	ENSGT00530000064743	ENSGT00940000154156.d #7	ENSGT00940000162027.b #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208.ob #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00940000154431.f.c.b	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000005102.f	ENSGT00390000004852.a.b #27	ENSGT00390000006086.a #28	ENSGT00940000155977 #30	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.a.a.a.a	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Hybrid Bos Indicus	MODERN SPECIES	23	PRRT4 (ENSBIXG00005023455)	ENSBIXG00005004012	IMPDH1 (ENSBIXG00005023654) #7	ENSBIXG00005004057	GARIN1A (ENSBIXG00005006904) #9	OPN1SW (ENSBIXG00005023745) #12	ENSBIXG00005024008 #10	CCDC136 (ENSBIXG00005024099) #13	FLNC (ENSBIXG00005024221) #18	ENSBIXG00005024244 #15	ATP6V1FNB (ENSBIXG00005024258) #16	KCP (ENSBIXG00005024276) #17	IRF5 (ENSBIXG00005024387) #19	TNPO3 (ENSBIXG00005024544) #20	TSPAN33 (ENSBIXG00005024609) #21	SMO (ENSBIXG00005004209) #22	ENSBIXG00005024648	AHCYL2 (ENSBIXG00005024776) #23	STRIP2 (ENSBIXG00005024926) #24	NRF1 (ENSBIXG00005025039) #26	ENSBIXG00005025101	ENSBIXG00005025153 #27	ENSBIXG00005025251 #28	KLHDC10 (ENSBIXG00005025331) #30	ENSBIXG00005025353	TMEM209 (ENSBIXG00005025529) #31	SSMEM1 (ENSBIXG00005007193) #32	CPA4 (ENSBIXG00005025635) #35	CPA5 (ENSBIXG00005025741) #36	CPA1 (ENSBIXG00005025764) #37	CEP41 (ENSBIXG00005025834)
Cow	MODERN SPECIES	23	PRRT4 (ENSBTAG00000047482)	ENSBTAG00000031866	IMPDH1 (ENSBTAG00000000296) #7	GARIN1A (ENSBTAG00000024291) #9	GARIN1B (ENSBTAG00000009867) #10	CALU (ENSBTAG00000016481) #11	OPN1SW (ENSBTAG00000016485) #12	CCDC136 (ENSBTAG00000011002) #13	FLNC (ENSBTAG00000006253) #18	ATP6V1F (ENSBTAG00000007572) #15	ATP6V1FNB (ENSBTAG00000045645) #16	KCP (ENSBTAG00000003449) #17	IRF5 (ENSBTAG00000004989) #19	TNPO3 (ENSBTAG00000004992) #20	TSPAN33 (ENSBTAG00000007253) #21	SMO (ENSBTAG00000013287) #22	AHCYL2 (ENSBTAG00000001754) #23	ENSBTAG00000051697	STRIP2 (ENSBTAG00000007206) #24	NRF1 (ENSBTAG00000014273) #26	ENSBTAG00000047845	UBE2H (ENSBTAG00000000911) #27	ZC3HC1 (ENSBTAG00000011247) #28	KLHDC10 (ENSBTAG00000000548) #30	TMEM209 (ENSBTAG00000015588) #31	ENSBTAG00000055228	SSMEM1 (ENSBTAG00000013473) #32	CPA4 (ENSBTAG00000046648) #35	CPA5 (ENSBTAG00000013476) #36	CPA1 (ENSBTAG00000046169) #37	CEP41 (ENSBTAG00000007413)
American bison	MODERN SPECIES	3374	PRRT4 (ENSBBBG00000013673)	IMPDH1 (ENSBBBG00000002924) #7	ENSBBBG00000002928	GARIN1A (ENSBBBG00000013741) #9	GARIN1B (ENSBBBG00000013746) #10	CALU (ENSBBBG00000002950) #11	OPN1SW (ENSBBBG00000013791) #12	ENSBBBG00000002958 #13	FLNC (ENSBBBG00000003024) #18	ATP6V1F (ENSBBBG00000013933) #15	ATP6V1FNB (ENSBBBG00000013937) #16	KCP (ENSBBBG00000003212) #17	IRF5 (ENSBBBG00000003226) #19	TNPO3 (ENSBBBG00000003272) #20	ENSBBBG00000001413 #21	SMO (ENSBBBG00000014370) #22	ENSBBBG00000001412	AHCYL2 (ENSBBBG00000003347) #23	STRIP2 (ENSBBBG00000014505) #24	SMKR1 (ENSBBBG00000014511) #25	NRF1 (ENSBBBG00000014541) #26	ENSBBBG00000014555	UBE2H (ENSBBBG00000008909) #27	ZC3HC1 (ENSBBBG00000008289) #28	KLHDC10 (ENSBBBG00000003482) #30	TMEM209 (ENSBBBG00000014646) #31	SSMEM1 (ENSBBBG00000014667) #32	CPA4 (ENSBBBG00000014707) #35	CPA5 (ENSBBBG00000014792) #36	CPA1 (ENSBBBG00000014815) #37	CEP41 (ENSBBBG00000014879)
Siberian musk deer	MODERN SPECIES	84	ENSMMSG00000020426	HILPDA (ENSMMSG00000020415)	GARIN1A (ENSMMSG00000020388) #9	GARIN1B (ENSMMSG00000020348) #10	CALU (ENSMMSG00000020199) #11	OPN1SW (ENSMMSG00000020155) #12	CCDC136 (ENSMMSG00000019946) #13	FLNC (ENSMMSG00000019492) #18	ATP6V1F (ENSMMSG00000019428) #15	ATP6V1FNB (ENSMMSG00000019402) #16	KCP (ENSMMSG00000018961) #17	IRF5 (ENSMMSG00000018827) #19	ENSMMSG00000018787	TNPO3 (ENSMMSG00000018649) #20	TSPAN33 (ENSMMSG00000018592) #21	SMO (ENSMMSG00000018531) #22	AHCYL2 (ENSMMSG00000018231) #23	STRIP2 (ENSMMSG00000018129) #24	SMKR1 (ENSMMSG00000018106) #25	NRF1 (ENSMMSG00000018044) #26	UBE2H (ENSMMSG00000017959) #27	ENSMMSG00000017936	ZC3HC1 (ENSMMSG00000017666) #28	KLHDC10 (ENSMMSG00000017588) #30	TMEM209 (ENSMMSG00000017357) #31	SSMEM1 (ENSMMSG00000017319) #32	CPA4 (ENSMMSG00000017188) #35	CPA5 (ENSMMSG00000017074) #36	CPA1 (ENSMMSG00000016989) #37	CEP41 (ENSMMSG00000016930)	MEST (ENSMMSG00000016390)
Yarkand deer	MODERN SPECIES	9	ENSCHYG00000015549	IMPDH1 (ENSCHYG00000015595) #7	ENSCHYG00000015886	GARIN1A (ENSCHYG00000015992) #9	GARIN1B (ENSCHYG00000016076) #10	CALU (ENSCHYG00000016210) #11	OPN1SW (ENSCHYG00000016509) #12	CCDC136 (ENSCHYG00000016583) #13	FLNC (ENSCHYG00000016957) #18	ATP6V1F (ENSCHYG00000018387) #15	ATP6V1FNB (ENSCHYG00000018427) #16	KCP (ENSCHYG00000018473) #17	IRF5 (ENSCHYG00000019113) #19	TNPO3 (ENSCHYG00000019439) #20	TSPAN33 (ENSCHYG00000019736) #21	SMO (ENSCHYG00000019882) #22	AHCYL2 (ENSCHYG00000019988) #23	STRIP2 (ENSCHYG00000020354) #24	SMKR1 (ENSCHYG00000020757) #25	NRF1 (ENSCHYG00000020814) #26	UBE2H (ENSCHYG00000021029) #27	ZC3HC1 (ENSCHYG00000021177) #28	KLHDC10 (ENSCHYG00000021307) #30	TMEM209 (ENSCHYG00000021505) #31	SSMEM1 (ENSCHYG00000021732) #32	CPA5 (ENSCHYG00000021815) #36	CPA1 (ENSCHYG00000022245) #37	CEP41 (ENSCHYG00000022356)	MEST (ENSCHYG00000022590)	COPG2 (ENSCHYG00000022977)	TSGA13 (ENSCHYG00000023089)
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00390000014201	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Ursidae	ANCESTRAL SPECIES	12	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121.f #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b.b #37	ENSGT00390000002222	ENSGT00510000047602
Ursus	ANCESTRAL SPECIES	82	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000168340	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121.f #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b.b #37	ENSGT00390000002222	ENSGT00510000047602
American black bear	MODERN SPECIES	1204					CALU (ENSUAMG00000022373) #11	OPN1SW (ENSUAMG00000022372) #12	CCDC136 (ENSUAMG00000022367) #13	FLNC (ENSUAMG00000021311) #18	ATP6V1F (ENSUAMG00000021295) #15	ATP6V1FNB (ENSUAMG00000021294) #16	KCP (ENSUAMG00000021291) #17	ENSUAMG00000021288	IRF5 (ENSUAMG00000021285) #19	TNPO3 (ENSUAMG00000021281) #20	TSPAN33 (ENSUAMG00000021280) #21	SMO (ENSUAMG00000021232) #22
Polar bear	MODERN SPECIES	281	RBM28 (ENSUMAG00000005997)	IMPDH1 (ENSUMAG00000006045) #7	GARIN1A (ENSUMAG00000006328) #9	GARIN1B (ENSUMAG00000006332) #10	CALU (ENSUMAG00000006337) #11	OPN1SW (ENSUMAG00000006346) #12	CCDC136 (ENSUMAG00000006415) #13	FLNC (ENSUMAG00000006701) #18	ATP6V1F (ENSUMAG00000006749) #15	ATP6V1FNB (ENSUMAG00000006753) #16	KCP (ENSUMAG00000006764) #17	ENSUMAG00000006860	IRF5 (ENSUMAG00000006864) #19	TNPO3 (ENSUMAG00000006882) #20	TSPAN33 (ENSUMAG00000006916) #21	SMO (ENSUMAG00000006946) #22	AHCYL2 (ENSUMAG00000007310) #23	STRIP2 (ENSUMAG00000009078) #24	SMKR1 (ENSUMAG00000009222) #25	NRF1 (ENSUMAG00000009234) #26	UBE2H (ENSUMAG00000009264) #27	ZC3HC1 (ENSUMAG00000009268) #28	KLHDC10 (ENSUMAG00000009283) #30	TMEM209 (ENSUMAG00000009292) #31	SSMEM1 (ENSUMAG00000009296) #32	CPA2 (ENSUMAG00000009302) #33	ENSUMAG00000009308 #35	ENSUMAG00000009314 #35	CPA5 (ENSUMAG00000009321) #36	CPA1 (ENSUMAG00000009335) #37	ENSUMAG00000009354
Giant Panda	MODERN SPECIES		RBM28 (ENSAMEG00000004776)	IMPDH1 (ENSAMEG00000004824) #7	ENSAMEG00000004871	GARIN1A (ENSAMEG00000004872) #9	GARIN1B (ENSAMEG00000004877) #10	CALU (ENSAMEG00000004885) #11	OPN1SW (ENSAMEG00000004922) #12	CCDC136 (ENSAMEG00000004945) #13	FLNC (ENSAMEG00000004952) #18	ATP6V1F (ENSAMEG00000005090) #15	ATP6V1FNB (ENSAMEG00000005091) #16	KCP (ENSAMEG00000005092) #17	IRF5 (ENSAMEG00000005109) #19	TNPO3 (ENSAMEG00000005135) #20	TSPAN33 (ENSAMEG00000005167) #21	SMO (ENSAMEG00000005185) #22	AHCYL2 (ENSAMEG00000005214) #23	STRIP2 (ENSAMEG00000005285) #24	SMKR1 (ENSAMEG00000025309) #25	NRF1 (ENSAMEG00000005353) #26	UBE2H (ENSAMEG00000029524) #27	ZC3HC1 (ENSAMEG00000005425) #28	KLHDC10 (ENSAMEG00000005455) #30	TMEM209 (ENSAMEG00000005471) #31	SSMEM1 (ENSAMEG00000005500) #32	ENSAMEG00000005506 #33	CPA4 (ENSAMEG00000005510) #35	CPA5 (ENSAMEG00000005521) #36	CPA1 (ENSAMEG00000005552) #37	CEP41 (ENSAMEG00000005624)	MEST (ENSAMEG00000005659)
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
American mink	MODERN SPECIES	3	PRRT4 (ENSNVIG00000000314)	IMPDH1 (ENSNVIG00000000252) #7	ENSNVIG00000000238	GARIN1A (ENSNVIG00000000229) #9	GARIN1B (ENSNVIG00000000204) #10	CALU (ENSNVIG00000000059) #11	OPN1SW (ENSNVIG00000000043) #12	CCDC136 (ENSNVIG00000023245) #13	FLNC (ENSNVIG00000023149) #18	ATP6V1F (ENSNVIG00000023142) #15	ATP6V1FNB (ENSNVIG00000023138) #16	KCP (ENSNVIG00000023112) #17	IRF5 (ENSNVIG00000023089) #19	TNPO3 (ENSNVIG00000023041) #20	TSPAN33 (ENSNVIG00000023035) #21	SMO (ENSNVIG00000023033) #22	AHCYL2 (ENSNVIG00000023011) #23	STRIP2 (ENSNVIG00000023005) #24	NRF1 (ENSNVIG00000022959) #26	UBE2H (ENSNVIG00000022946) #27	ZC3HC1 (ENSNVIG00000022938) #28	KLHDC10 (ENSNVIG00000022934) #30	TMEM209 (ENSNVIG00000022922) #31	SSMEM1 (ENSNVIG00000022917) #32	CPA2 (ENSNVIG00000022912) #33	CBPA4 (ENSNVIG00000022882) #35	CPA5 (ENSNVIG00000022861) #36	CPA1 (ENSNVIG00000022855) #37	CEP41 (ENSNVIG00000022835)	MEST (ENSNVIG00000022825)	COPG2 (ENSNVIG00000022817)
Ferret	MODERN SPECIES	168	ENSMPUG00000006497	IMPDH1 (ENSMPUG00000006480) #7	ENSMPUG00000006475	GARIN1A (ENSMPUG00000006446) #9	GARIN1B (ENSMPUG00000006404) #10	CALU (ENSMPUG00000006394) #11	OPN1SW (ENSMPUG00000006323) #12	CCDC136 (ENSMPUG00000006305) #13	FLNC (ENSMPUG00000006260) #18	ATP6V1F (ENSMPUG00000006253) #15	KCP (ENSMPUG00000006115) #17	IRF5 (ENSMPUG00000006034) #19	TNPO3 (ENSMPUG00000006021) #20	ENSMPUG00000006013	TSPAN33 (ENSMPUG00000005894) #21	SMO (ENSMPUG00000005883) #22	AHCYL2 (ENSMPUG00000005673) #23	STRIP2 (ENSMPUG00000005438) #24	SMKR1 (ENSMPUG00000005431) #25	ENSMPUG00000018741	NRF1 (ENSMPUG00000005319) #26	UBE2H (ENSMPUG00000005309) #27	ZC3HC1 (ENSMPUG00000005297) #28	KLHDC10 (ENSMPUG00000005288) #30	TMEM209 (ENSMPUG00000005210) #31	SSMEM1 (ENSMPUG00000005203) #32	CPA2 (ENSMPUG00000005196) #33	CPA4 (ENSMPUG00000005188) #35	CPA5 (ENSMPUG00000005109) #36	CPA1 (ENSMPUG00000005102) #37	CEP41 (ENSMPUG00000005094)
Canidae	ANCESTRAL SPECIES	22	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Dog	MODERN SPECIES	5	IMPDH (ENSCAFG00845024195) #7	ENSCAFG00845024069	GARIN1A (ENSCAFG00845024028) #9	FAM71F1 (ENSCAFG00845023982) #10	CALU (ENSCAFG00845023757) #11	OPN1SW (ENSCAFG00845023668) #12	CCDC136 (ENSCAFG00845023460) #13	FLNC (ENSCAFG00845022554) #18	ATP6V1F (ENSCAFG00845022337) #15	ATP6V1FNB (ENSCAFG00845022312) #16	ENSCAFG00845021771 #17	IRF5 (ENSCAFG00845021435) #19	ENSCAFG00845021349	TNPO3 (ENSCAFG00845020947) #20	TSPAN33 (ENSCAFG00845020805) #21	SMO (ENSCAFG00845020728) #22	ENSCAFG00845020690	AHCYL2 (ENSCAFG00845020537) #23	SMKR1 (ENSCAFG00845020464) #25	STRIP2 (ENSCAFG00845020214) #24	NRF1 (ENSCAFG00845019891) #26	UBE2H (ENSCAFG00845019678) #27	ZC3HC1 (ENSCAFG00845019379) #28	KLHDC10 (ENSCAFG00845019195) #30	TMEM209 (ENSCAFG00845018990) #31	SSMEM1 (ENSCAFG00845018910) #32	CPA2 (ENSCAFG00845018693) #33	CPA1 (ENSCAFG00845018477) #35	CPA5 (ENSCAFG00845018311) #36	CPA1 (ENSCAFG00845018212) #37	ENSCAFG00845018162
Dingo	MODERN SPECIES	203	IMPDH1 (ENSCAFG00020021650) #7	ENSCAFG00020021651	ENSCAFG00020021652	GARIN1A (ENSCAFG00020021653) #9	GARIN1B (ENSCAFG00020021654) #10	CALU (ENSCAFG00020021663) #11	OPN1SW (ENSCAFG00020021669) #12	CCDC136 (ENSCAFG00020021687) #13	FLNC (ENSCAFG00020021914) #18	ATP6V1F (ENSCAFG00020022430) #15	ATP6V1FNB (ENSCAFG00020022431) #16	KCP (ENSCAFG00020022439) #17	IRF5 (ENSCAFG00020022461) #19	TNPO3 (ENSCAFG00020022462) #20	ENSCAFG00020022605	SMO (ENSCAFG00020022606) #22	ENSCAFG00020022607	ENSCAFG00020022609	AHCYL2 (ENSCAFG00020022647) #23	STRIP2 (ENSCAFG00020023266) #24	SMKR1 (ENSCAFG00020023320) #25	NRF1 (ENSCAFG00020023321) #26	UBE2H (ENSCAFG00020023330) #27	ENSCAFG00020023333 #28	KLHDC10 (ENSCAFG00020023356) #30	TMEM209 (ENSCAFG00020023363) #31	SSMEM1 (ENSCAFG00020023366) #32	CPA2 (ENSCAFG00020023371) #33	CPA4 (ENSCAFG00020023373) #35	CPA5 (ENSCAFG00020023378) #36	CPA1 (ENSCAFG00020023388) #37
Red fox	MODERN SPECIES	83	IMPDH1 (ENSVVUG00000007352) #7	ENSVVUG00000010368	ENSVVUG00000010373	GARIN1A (ENSVVUG00000010379) #9	GARIN1B (ENSVVUG00000010383) #10	CALU (ENSVVUG00000010389) #11	OPN1SW (ENSVVUG00000010402) #12	CCDC136 (ENSVVUG00000010413) #13	FLNC (ENSVVUG00000010437) #18	ATP6V1F (ENSVVUG00000010470) #15	ATP6V1FNB (ENSVVUG00000010471) #16	KCP (ENSVVUG00000010493) #17	IRF5 (ENSVVUG00000010949) #19	TNPO3 (ENSVVUG00000011004) #20	TSPAN33 (ENSVVUG00000012208) #21	SMO (ENSVVUG00000012217) #22	AHCYL2 (ENSVVUG00000012272) #23	ENSVVUG00000012297	STRIP2 (ENSVVUG00000012302) #24	SMKR1 (ENSVVUG00000012317) #25	NRF1 (ENSVVUG00000012330) #26	UBE2H (ENSVVUG00000012372) #27	ZC3HC1 (ENSVVUG00000012386) #28	KLHDC10 (ENSVVUG00000012395) #30	TMEM209 (ENSVVUG00000012416) #31	SSMEM1 (ENSVVUG00000012439) #32	CPA2 (ENSVVUG00000012445) #33	CPA4 (ENSVVUG00000012475) #35	CPA5 (ENSVVUG00000012489) #36	ENSVVUG00000012510 #37	CEP41 (ENSVVUG00000012513)
Felidae	ANCESTRAL SPECIES	13	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Panthera	ANCESTRAL SPECIES	1	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00960000187999	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Panthera_a	ANCESTRAL SPECIES		ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914.a	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00960000187999	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
leopard	MODERN SPECIES	23	LEP (ENSPPRG00000004465)	RBM28 (ENSPPRG00000004420)	PRRT4 (ENSPPRG00000004214)	IMPDH1 (ENSPPRG00000004153) #7	GARIN1A (ENSPPRG00000003232) #9	GARIN1B (ENSPPRG00000003211) #10	CALU (ENSPPRG00000002880) #11	OPN1SW (ENSPPRG00000002803) #12	ENSPPRG00000002789 #13	FLNC (ENSPPRG00000002721) #18	ATP6V1F (ENSPPRG00000002543) #15	ATP6V1FNB (ENSPPRG00000002532) #16	IRF5 (ENSPPRG00000002195) #19	TNPO3 (ENSPPRG00000002050) #20	TSPAN33 (ENSPPRG00000001477) #21	SMO (ENSPPRG00000001467) #22	AHCYL2 (ENSPPRG00000001412) #23	STRIP2 (ENSPPRG00000001272) #24	SMKR1 (ENSPPRG00000001247) #25	ENSPPRG00000001236	ENSPPRG00000001228	NRF1 (ENSPPRG00000001152) #26	UBE2H (ENSPPRG00000001068) #27	ZC3HC1 (ENSPPRG00000001004) #28	KLHDC10 (ENSPPRG00000000875) #30	TMEM209 (ENSPPRG00000000844) #31	SSMEM1 (ENSPPRG00000000727) #32	CPA2 (ENSPPRG00000000717) #33	CPA4 (ENSPPRG00000000704) #35	CPA5 (ENSPPRG00000000542) #36	CPA1 (ENSPPRG00000000517) #37
lion	MODERN SPECIES	2	PRRT4 (ENSPLOG00000012122)	IMPDH1 (ENSPLOG00000012239) #7	ENSPLOG00000012531	GARIN1A (ENSPLOG00000012554) #9	GARIN1B (ENSPLOG00000012642) #10	CALU (ENSPLOG00000012712) #11	OPN1SW (ENSPLOG00000012745) #12	CCDC136 (ENSPLOG00000012842) #13	FLNC (ENSPLOG00000013283) #18	ATP6V1F (ENSPLOG00000014078) #15	ATP6V1FNB (ENSPLOG00000014108) #16	ENSPLOG00000014143	IRF5 (ENSPLOG00000014206) #19	TNPO3 (ENSPLOG00000014381) #20	TSPAN33 (ENSPLOG00000015074) #21	SMO (ENSPLOG00000015145) #22	AHCYL2 (ENSPLOG00000015366) #23	STRIP2 (ENSPLOG00000015863) #24	SMKR1 (ENSPLOG00000016163) #25	NRF1 (ENSPLOG00000016212) #26	ENSPLOG00000016280	UBE2H (ENSPLOG00000016346) #27	ZC3HC1 (ENSPLOG00000016422) #28	KLHDC10 (ENSPLOG00000016715) #30	TMEM209 (ENSPLOG00000016876) #31	SSMEM1 (ENSPLOG00000017139) #32	CPA2 (ENSPLOG00000017188) #33	CPA4 (ENSPLOG00000017313) #35	CPA5 (ENSPLOG00000017556) #36	CPA1 (ENSPLOG00000017728) #37	CEP41 (ENSPLOG00000017870)
Tiger	MODERN SPECIES	109	LEP (ENSPTIG00000008315)	RBM28 (ENSPTIG00000008550)	ENSPTIG00000011837	IMPDH1 (ENSPTIG00000012727) #7	GARIN1A (ENSPTIG00000016417) #9	GARIN1B (ENSPTIG00000017013) #10	CALU (ENSPTIG00000018066) #11	OPN1SW (ENSPTIG00000000315) #12	ENSPTIG00000002833 #13	FLNC (ENSPTIG00000008651) #18	ATP6V1F (ENSPTIG00000015589) #15	ATP6V1FNB (ENSPTIG00000016205) #16	IRF5 (ENSPTIG00000011636) #19	TNPO3 (ENSPTIG00000016167) #20	TSPAN33 (ENSPTIG00000005418) #21	SMO (ENSPTIG00000008685) #22	AHCYL2 (ENSPTIG00000010641) #23	STRIP2 (ENSPTIG00000017007) #24	SMKR1 (ENSPTIG00000020786) #25	ENSPTIG00000021137	NRF1 (ENSPTIG00000021708) #26	UBE2H (ENSPTIG00000006312) #27	ZC3HC1 (ENSPTIG00000007823) #28	KLHDC10 (ENSPTIG00000011828) #30	TMEM209 (ENSPTIG00000012844) #31	SSMEM1 (ENSPTIG00000016226) #32	CPA2 (ENSPTIG00000016384) #33	CPA4 (ENSPTIG00000017667) #35	CPA5 (ENSPTIG00000019072) #36	CPA1 (ENSPTIG00000006360) #37	CEP41 (ENSPTIG00000008103)
Cat	MODERN SPECIES	1	PRRT4 (ENSFCAG00000028746)	IMPDH1 (ENSFCAG00000000949) #7	ENSFCAG00000023233	GARIN1A (ENSFCAG00000000950) #9	GARIN1B (ENSFCAG00000008096) #10	CALU (ENSFCAG00000034966) #11	OPN1SW (ENSFCAG00000000952) #12	CCDC136 (ENSFCAG00000043434) #13	FLNC (ENSFCAG00000000954) #18	ATP6V1F (ENSFCAG00000000364) #15	ATP6V1FNB (ENSFCAG00000030475) #16	KCP (ENSFCAG00000027848) #17	IRF5 (ENSFCAG00000000956) #19	TNPO3 (ENSFCAG00000018186) #20	TSPAN33 (ENSFCAG00000014547) #21	SMO (ENSFCAG00000026041) #22	AHCYL2 (ENSFCAG00000028700) #23	STRIP2 (ENSFCAG00000023901) #24	SMKR1 (ENSFCAG00000039173) #25	NRF1 (ENSFCAG00000010212) #26	UBE2H (ENSFCAG00000044906) #27	ZC3HC1 (ENSFCAG00000010429) #28	KLHDC10 (ENSFCAG00000003334) #30	TMEM209 (ENSFCAG00000027403) #31	SSMEM1 (ENSFCAG00000030507) #32	CPA2 (ENSFCAG00000009321) #33	CPA4 (ENSFCAG00000009326) #35	CPA5 (ENSFCAG00000009330) #36	CPA1 (ENSFCAG00000014234) #37	CEP41 (ENSFCAG00000014235)	MEST (ENSFCAG00000022984)
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Chiroptera	ANCESTRAL SPECIES	41	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Microchiroptera	ANCESTRAL SPECIES	23	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000169914	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Greater horseshoe bat	MODERN SPECIES	18	PRRT4 (ENSRFEG00010020096)	IMPDH1 (ENSRFEG00010019831) #7	ENSRFEG00010019793	ENSRFEG00010019784	GARIN1A (ENSRFEG00010019736) #9	GARIN1B (ENSRFEG00010019702) #10	CALU (ENSRFEG00010019415) #11	CCDC136 (ENSRFEG00010019309) #13	FLNC (ENSRFEG00010018516) #18	ATP6V1F (ENSRFEG00010018431) #15	ATP6V1FNB (ENSRFEG00010018398) #16	KCP (ENSRFEG00010016719) #17	IRF5 (ENSRFEG00010016501) #19	TNPO3 (ENSRFEG00010016344) #20	TSPAN33 (ENSRFEG00010016275) #21	SMO (ENSRFEG00010016219) #22	AHCYL2 (ENSRFEG00010015829) #23	STRIP2 (ENSRFEG00010015748) #24	SMKR1 (ENSRFEG00010015718) #25	NRF1 (ENSRFEG00010015646) #26	UBE2H (ENSRFEG00010015520) #27	ZC3HC1 (ENSRFEG00010015210) #28	KLHDC10 (ENSRFEG00010015124) #30	TMEM209 (ENSRFEG00010014808) #31	SSMEM1 (ENSRFEG00010014725) #32	CPA2 (ENSRFEG00010014664) #33	CPA4 (ENSRFEG00010014194) #35	CPA5 (ENSRFEG00010013818) #36	CPA1 (ENSRFEG00010013736) #37	CEP41 (ENSRFEG00010013530)	MEST (ENSRFEG00010013405)
Microbat	MODERN SPECIES	983			ENSMLUG00000026420 #10	CALU (ENSMLUG00000001309) #11	OPN1SW (ENSMLUG00000001320) #12	CCDC136 (ENSMLUG00000001322) #13	FLNC (ENSMLUG00000001339) #18	ENSMLUG00000001392 #15	ATP6V1FNB (ENSMLUG00000027620) #16	KCP (ENSMLUG00000001394) #17	IRF5 (ENSMLUG00000001406) #19	ENSMLUG00000026557	TNPO3 (ENSMLUG00000000947) #20	ENSMLUG00000030322	TSPAN33 (ENSMLUG00000000974) #21	SMO (ENSMLUG00000000966) #22	ENSMLUG00000029505	ENSMLUG00000023124	ENSMLUG00000023097	AHCYL2 (ENSMLUG00000017565) #23	STRIP2 (ENSMLUG00000007265) #24	ENSMLUG00000023935	SMKR1 (ENSMLUG00000027572) #25	ENSMLUG00000028002	ENSMLUG00000003100 #26	UBE2H (ENSMLUG00000000102) #27	ENSMLUG00000000063 #28	KLHDC10 (ENSMLUG00000025634) #30	TMEM209 (ENSMLUG00000015369) #31	SSMEM1 (ENSMLUG00000015383) #32	CPA2 (ENSMLUG00000015389) #33
Megabat	MODERN SPECIES	1617															TSPAN33 (ENSPVAG00000003376) #21	SMO (ENSPVAG00000003377) #22	AHCYL2 (ENSPVAG00000003378) #23	STRIP2 (ENSPVAG00000003381) #24
Equus	ANCESTRAL SPECIES	13	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Horse	MODERN SPECIES	25	LEP (ENSECAG00000030283)	RBM28 (ENSECAG00000007745)	PRRT4 (ENSECAG00000037532)	IMPDH1 (ENSECAG00000015391) #7	ENSECAG00000003049	GARIN1A (ENSECAG00000047048) #9	GARIN1B (ENSECAG00000022119) #10	CALU (ENSECAG00000055523) #11	OPN1SW (ENSECAG00000023205) #12	CCDC136 (ENSECAG00000004534) #13	FLNC (ENSECAG00000010052) #18	KCP (ENSECAG00000024406) #17	IRF5 (ENSECAG00000009902) #19	TNPO3 (ENSECAG00000012815) #20	TSPAN33 (ENSECAG00000019800) #21	SMO (ENSECAG00000004904) #22	AHCYL2 (ENSECAG00000014138) #23	STRIP2 (ENSECAG00000023334) #24	ENSECAG00000029629 #25	NRF1 (ENSECAG00000012837) #26	UBE2H (ENSECAG00000015420) #27	KLHDC10 (ENSECAG00000007654) #30	ZC3HC1 (ENSECAG00000017886) #28	TMEM209 (ENSECAG00000012438) #31	SSMEM1 (ENSECAG00000036570) #32	ENSECAG00000031336 #33	CPA4 (ENSECAG00000018730) #35	CPA5 (ENSECAG00000029504) #36	CPA1 (ENSECAG00000019641) #37	CEP41 (ENSECAG00000016501)	MEST (ENSECAG00000021689)
Donkey	MODERN SPECIES		RBM28 (ENSEASG00005008528)	PRRT4 (ENSEASG00005038080)	IMPDH1 (ENSEASG00005008533) #7	HILPDA (ENSEASG00005008537)	GARIN1A (ENSEASG00005008539) #9	GARIN1B (ENSEASG00005008541) #10	CALU (ENSEASG00005008542) #11	OPN1SW (ENSEASG00005008544) #12	CCDC136 (ENSEASG00005008548) #13	FLNC (ENSEASG00005008563) #18	ATP6V1FNB (ENSEASG00005026227) #16	KCP (ENSEASG00005008620) #17	IRF5 (ENSEASG00005008667) #19	TNPO3 (ENSEASG00005008677) #20	TSPAN33 (ENSEASG00005008685) #21	SMO (ENSEASG00005008716) #22	AHCYL2 (ENSEASG00005008764) #23	STRIP2 (ENSEASG00005008770) #24	SMKR1 (ENSEASG00005037203) #25	NRF1 (ENSEASG00005008777) #26	UBE2H (ENSEASG00005008786) #27	ZC3HC1 (ENSEASG00005008789) #28	KLHDC10 (ENSEASG00005008795) #30	TMEM209 (ENSEASG00005008802) #31	SSMEM1 (ENSEASG00005008808) #32	CPA2 (ENSEASG00005008812) #33	CPA4 (ENSEASG00005008819) #35	CPA5 (ENSEASG00005008824) #36	CPA1 (ENSEASG00005008833) #37	ENSEASG00005024331	CEP41 (ENSEASG00005008839)
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00390000014201	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Xenarthra	ANCESTRAL SPECIES	114								ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Armadillo	MODERN SPECIES	2008						CALU (ENSDNOG00000036017) #11	CCDC136 (ENSDNOG00000011397) #13	FLNC (ENSDNOG00000011452) #18	ENSDNOG00000044329 #15	ATP6V1FNB (ENSDNOG00000048101) #16	ENSDNOG00000035753	KCP (ENSDNOG00000036019) #17	IRF5 (ENSDNOG00000013370) #19	TNPO3 (ENSDNOG00000002556) #20	ENSDNOG00000033728 #21	SMO (ENSDNOG00000030731) #22	AHCYL2 (ENSDNOG00000034119) #23	STRIP2 (ENSDNOG00000007065) #24	SMKR1 (ENSDNOG00000034218) #25	NRF1 (ENSDNOG00000014243) #26	UBE2H (ENSDNOG00000001189) #27	ZC3HC1 (ENSDNOG00000045016) #28	KLHDC10 (ENSDNOG00000002060) #30	TMEM209 (ENSDNOG00000014834) #31	SSMEM1 (ENSDNOG00000047906) #32	CPA4 (ENSDNOG00000008530) #35	CPA5 (ENSDNOG00000008551) #36	CPA1 (ENSDNOG00000010540) #37	CEP41 (ENSDNOG00000033202)
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00390000011772	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36	ENSGT00940000158082.b #37	ENSGT00390000002222
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00390000011772	ENSGT00550000074976	ENSGT00730000111591	ENSGT00940000154156.d #7	ENSGT00940000162027 #9	ENSGT00940000161477 #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Elephant	MODERN SPECIES	428	LEP (ENSLAFG00000010714)	RBM28 (ENSLAFG00000010717)	ENSLAFG00000030090	IMPDH1 (ENSLAFG00000008090) #7	GARIN1A (ENSLAFG00000029416) #9	GARIN1B (ENSLAFG00000003795) #10	CALU (ENSLAFG00000003798) #11	OPN1SW (ENSLAFG00000003803) #12	CCDC136 (ENSLAFG00000003804) #13	FLNC (ENSLAFG00000008705) #18	ATP6V1F (ENSLAFG00000008724) #15	KCP (ENSLAFG00000014260) #17	IRF5 (ENSLAFG00000021568) #19	TNPO3 (ENSLAFG00000002738) #20	TSPAN33 (ENSLAFG00000025948) #21	SMO (ENSLAFG00000013328) #22	AHCYL2 (ENSLAFG00000005481) #23	STRIP2 (ENSLAFG00000021474) #24	NRF1 (ENSLAFG00000003500) #26	UBE2H (ENSLAFG00000007810) #27	ZC3HC1 (ENSLAFG00000001292) #28	KLHDC10 (ENSLAFG00000005526) #30	TMEM209 (ENSLAFG00000005527) #31	SSMEM1 (ENSLAFG00000028169) #32	CPA2 (ENSLAFG00000005532) #33	CPA4 (ENSLAFG00000005538) #35	CPA5 (ENSLAFG00000005542) #36	CEP41 (ENSLAFG00000012145)	MEST (ENSLAFG00000006066)
Hyrax	MODERN SPECIES	10511																SMO (ENSPCAG00000011928) #22
Tenrec	MODERN SPECIES	2541																SMO (ENSETEG00000009128) #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000161477.b #10	ENSGT00940000161477.a #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Marsupialia_b	ANCESTRAL SPECIES	10	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000161477.b #10	ENSGT00940000161477.a #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Diprotodontia	ANCESTRAL SPECIES	28	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000161477.b #10	ENSGT00940000161477.a #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Diprotodontia_a	ANCESTRAL SPECIES	27	ENSGT00940000154156.d #7	ENSGT00950000185983	ENSGT00940000169914	ENSGT00940000161477.b #10	ENSGT00940000161477.a #10	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000161774 #35	ENSGT00940000161666 #36
Common wonbat	MODERN SPECIES	1071	LEP (ENSVURG00010003614)	RBM28 (ENSVURG00010003624)	PRRT4 (ENSVURG00010003660)	IMPDH1 (ENSVURG00010003732) #7	ENSVURG00010004265	GARIN1B (ENSVURG00010004277) #10	CALU (ENSVURG00010004310) #11	OPN1SW (ENSVURG00010004385) #12	ENSVURG00010004398 #13	FLNC (ENSVURG00010004413) #18	ENSVURG00010004428 #15	ATP6V1FNB (ENSVURG00010004431) #16	IRF5 (ENSVURG00010004438) #19	TNPO3 (ENSVURG00010004478) #20	TSPAN33 (ENSVURG00010004797) #21	SMO (ENSVURG00010004827) #22	ENSVURG00010004854	AHCYL2 (ENSVURG00010004886) #23	STRIP2 (ENSVURG00010004937) #24	SMKR1 (ENSVURG00010004988) #25	NRF1 (ENSVURG00010005027) #26	UBE2H (ENSVURG00010005072) #27	ZC3HC1 (ENSVURG00010005087) #28	ENSVURG00010005110	KLHDC10 (ENSVURG00010005127) #30	TMEM209 (ENSVURG00010005164) #31	ENSVURG00010005258 #32	CPA2 (ENSVURG00010005265) #33
koala	MODERN SPECIES	96	ENSPCIG00000012805	ENSPCIG00000012804 #10	ENSPCIG00000012803 #10	CALU (ENSPCIG00000012771) #11	OPN1SW (ENSPCIG00000012769) #12	ENSPCIG00000036887 #13	ENSPCIG00000011585 #18	ENSPCIG00000032966 #18	ATP6V1F (ENSPCIG00000011494) #15	ATP6V1FNB (ENSPCIG00000011493) #16	KCP (ENSPCIG00000011394) #17	ENSPCIG00000011377	IRF5 (ENSPCIG00000033269) #19	TNPO3 (ENSPCIG00000011366) #20	TSPAN33 (ENSPCIG00000011364) #21	SMO (ENSPCIG00000011357) #22	AHCYL2 (ENSPCIG00000000784) #23	STRIP2 (ENSPCIG00000028495) #24	SMKR1 (ENSPCIG00000028737) #25	NRF1 (ENSPCIG00000020610) #26	UBE2H (ENSPCIG00000006524) #27	ZC3HC1 (ENSPCIG00000020619) #28	KLHDC10 (ENSPCIG00000020722) #30	ENSPCIG00000020728	TMEM209 (ENSPCIG00000020752) #31	ENSPCIG00000020754 #32	ENSPCIG00000020755	CPA4 (ENSPCIG00000030803) #35	CPA5 (ENSPCIG00000027460) #36	CPA1 (ENSPCIG00000027465) #37	CEP41 (ENSPCIG00000027466)
Wallaby	MODERN SPECIES	3456																SMO (ENSMEUG00000003121) #22
Tasmanian devil	MODERN SPECIES	4	RBM28 (ENSSHAG00000017017)	PRRT4 (ENSSHAG00000029521)	IMPDH1 (ENSSHAG00000024079) #7	ENSSHAG00000022514	GARIN1B (ENSSHAG00000021537) #10	CALU (ENSSHAG00000002536) #11	OPN1SW (ENSSHAG00000021418) #12	FLNC (ENSSHAG00000004623) #18	ENSSHAG00000003962 #13	ATP6V1F (ENSSHAG00000021210) #15	ATP6V1FNB (ENSSHAG00000005474) #16	KCP (ENSSHAG00000005683) #17	IRF5 (ENSSHAG00000006683) #19	TNPO3 (ENSSHAG00000006837) #20	TSPAN33 (ENSSHAG00000025493) #21	SMO (ENSSHAG00000008843) #22	AHCYL2 (ENSSHAG00000009906) #23	STRIP2 (ENSSHAG00000010279) #24	NRF1 (ENSSHAG00000011427) #26	UBE2H (ENSSHAG00000027272) #27	ZC3HC1 (ENSSHAG00000002529) #28	KLHDC10 (ENSSHAG00000004388) #30	ENSSHAG00000005179	TMEM209 (ENSSHAG00000002210) #31	SSMEM1 (ENSSHAG00000003192) #32	ENSSHAG00000004010 #33	ENSSHAG00000004415 #33	ENSSHAG00000031014 #35	ENSSHAG00000004168 #35	CPA5 (ENSSHAG00000006574) #36	CPA1 (ENSSHAG00000022446) #37
Opossum	MODERN SPECIES	7	IMPDH1 (ENSMODG00000015140) #7	ENSMODG00000038899	ENSMODG00000029529 #10	ENSMODG00000015091 #10	CALU (ENSMODG00000015080) #11	OPN1SW (ENSMODG00000015071) #12	ENSMODG00000015065 #13	FLNC (ENSMODG00000015048) #18	ATP6V1F (ENSMODG00000049684) #15	ATP6V1FNB (ENSMODG00000029411) #16	ENSMODG00000031839	ENSMODG00000049892 #19	TNPO3 (ENSMODG00000014700) #20	ENSMODG00000038571	TSPAN33 (ENSMODG00000014684) #21	SMO (ENSMODG00000014680) #22	ENSMODG00000014672 #23	ENSMODG00000024483	STRIP2 (ENSMODG00000014664) #24	SMKR1 (ENSMODG00000041471) #25	ENSMODG00000024477	NRF1 (ENSMODG00000014645) #26	UBE2H (ENSMODG00000014636) #27	ZC3HC1 (ENSMODG00000014630) #28	KLHDC10 (ENSMODG00000014616) #30	TMEM209 (ENSMODG00000014603) #31	SSMEM1 (ENSMODG00000014561) #32	CPA4 (ENSMODG00000014554) #35	CPA5 (ENSMODG00000014548) #36	CPA1 (ENSMODG00000014538) #37	CEP41 (ENSMODG00000014526)
Platypus	MODERN SPECIES	1	SND1 (ENSOANG00000000817)	LRRC4 (ENSOANG00000050749)	LEP (ENSOANG00000000816)	ENSOANG00000000815	IMPDH1 (ENSOANG00000000814) #7	ENSOANG00000031572 #10	CALU (ENSOANG00000011440) #11	ENSOANG00000011442 #13	FLNC (ENSOANG00000011443) #18	ATP6V1F (ENSOANG00000011447) #15	ATP6V1FNB (ENSOANG00000043187) #16	KCP (ENSOANG00000014620) #17	IRF5 (ENSOANG00000011449) #19	TNPO3 (ENSOANG00000011451) #20	TSPAN33 (ENSOANG00000011453) #21	SMO (ENSOANG00000011454) #22	AHCYL2 (ENSOANG00000011456) #23	STRIP2 (ENSOANG00000011457) #24	SMKR1 (ENSOANG00000011455) #25	NRF1 (ENSOANG00000011458) #26	UBE2H (ENSOANG00000011459) #27	ZC3HC1 (ENSOANG00000011460) #28	KLHDC10 (ENSOANG00000011461) #30	ENSOANG00000011462	TMEM209 (ENSOANG00000011463) #31	ENSOANG00000011464 #32	CPA2 (ENSOANG00000011465) #33	CPA4 (ENSOANG00000011466) #35	ENSOANG00000011467	CPA1 (ENSOANG00000011468) #37	CEP41 (ENSOANG00000011470)
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000156551	ENSGT00940000173712	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00940000160243 #17	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37
Lepidosauria	ANCESTRAL SPECIES	3						ENSGT00940000160243 #17	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00390000014443	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Laterata	ANCESTRAL SPECIES	50									ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Common wall lizard	MODERN SPECIES	1	ENSPMRG00000014060	ENSPMRG00000014046	ENSPMRG00000014031	ENSPMRG00000015750	ENSPMRG00000015732	ATP6V1FNB (ENSPMRG00000015731) #16	ATP6V1F (ENSPMRG00000015729) #15	FLNC (ENSPMRG00000014781) #18	ENSPMRG00000014658 #13	OPN1SW (ENSPMRG00000014651) #12	CALU (ENSPMRG00000014645) #11	IRF5 (ENSPMRG00000014637) #19	TNPO3 (ENSPMRG00000014622) #20	ENSPMRG00000014617	TSPAN33 (ENSPMRG00000014611) #21	SMO (ENSPMRG00000014552) #22	ENSPMRG00000014541	AHCYL2 (ENSPMRG00000014538) #23	STRIP2 (ENSPMRG00000014533) #24	SMKR1 (ENSPMRG00000014530) #25	NRF1 (ENSPMRG00000014522) #26	UBE2H (ENSPMRG00000014518) #27	ZC3HC1 (ENSPMRG00000014510) #28	KLHDC10 (ENSPMRG00000014505) #30	ENSPMRG00000014461	TMEM209 (ENSPMRG00000014456) #31	CPA2 (ENSPMRG00000014450) #33	CPA1 (ENSPMRG00000014436) #37	CEP41 (ENSPMRG00000014428)	MEST (ENSPMRG00000014420)	COPG2 (ENSPMRG00000014403)
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000013584	ENSSMRG00000013583	ENSSMRG00000013581	ENSSMRG00000013580	ENSSMRG00000013578	GARIN1B (ENSSMRG00000013577) #10	ENSSMRG00000013576	ENSSMRG00000013575	FLNC (ENSSMRG00000013567) #18	ENSSMRG00000013564 #13	OPN1SW (ENSSMRG00000013555) #12	CALU (ENSSMRG00000013554) #11	IRF5 (ENSSMRG00000013552) #19	TNPO3 (ENSSMRG00000013551) #20	TSPAN33 (ENSSMRG00000013550) #21	SMO (ENSSMRG00000013549) #22	AHCYL2 (ENSSMRG00000013548) #23	STRIP2 (ENSSMRG00000013547) #24	SMKR1 (ENSSMRG00000013546) #25	NRF1 (ENSSMRG00000013545) #26	UBE2H (ENSSMRG00000013542) #27	ZC3HC1 (ENSSMRG00000013541) #28	KLHDC10 (ENSSMRG00000013540) #30	ENSSMRG00000013480	ENSSMRG00000013477	TMEM209 (ENSSMRG00000013475) #31	CPA2 (ENSSMRG00000013472) #33	ENSSMRG00000013470	ENSSMRG00000013469 #37	ENSSMRG00000013190 #37	CEP41 (ENSSMRG00000013189)
Toxicofera	ANCESTRAL SPECIES	32	ENSGT00940000156551	ENSGT00940000173712	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.e.a ##23	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Elapidae	ANCESTRAL SPECIES	33	ENSGT00940000173712	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00950000182946.cb	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT01010000222360.E.c.l #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c.k #11	ENSGT00940000159926.a #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.e.a ##23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00970000194206	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a	ENSGT00940000154457.b.bb.b
Elapidae_a	ANCESTRAL SPECIES	270															ENSGT00940000159484 #21	ENSGT00940000157206 #22
Blue-lipped sea krait	MODERN SPECIES	6393															TSPAN33 (ENSLLTG00000004702) #21	SMO (ENSLLTG00000004678) #22
Indian cobra	MODERN SPECIES	6	MIOX (ENSNNAG00000018018)	ENSNNAG00000018017	ENSNNAG00000018013	ENSNNAG00000018011	ENSNNAG00000018003	ENSNNAG00000017998	ENSNNAG00000017994	ENSNNAG00000017990	ENSNNAG00000017983	ATP6V1FNB (ENSNNAG00000017978) #16	ATP6V1F (ENSNNAG00000017974) #15	FLNC (ENSNNAG00000008778) #18	ENSNNAG00000008061 #11	ENSNNAG00000008012 #11	ENSNNAG00000007987 #19	SMO (ENSNNAG00000007908) #22	AHCYL2 (ENSNNAG00000007765) ##23	STRIP2 (ENSNNAG00000007642) #24	UBE2H (ENSNNAG00000011870) #27	ENSNNAG00000011852 #28	ENSNNAG00000011841	KLHDC10 (ENSNNAG00000011635) #30	TMEM209 (ENSNNAG00000011563) #31	CPA2 (ENSNNAG00000011289) #33	CEP41 (ENSNNAG00000010922)	MEST (ENSNNAG00000010812)	COPG2 (ENSNNAG00000010588)	ENSNNAG00000010547	NET1 (ENSNNAG00000010474)	ENSNNAG00000010458	ENSNNAG00000010393
Lizard	MODERN SPECIES	1259																SMO (ENSACAG00000000255) #22	ENSACAG00000000251	ENSACAG00000000248	AHCYL2 (ENSACAG00000014330) #23	STRIP2 (ENSACAG00000014209) #24	SMKR1 (ENSACAG00000041190) #25	ENSACAG00000028394	NRF1 (ENSACAG00000014124) #26
tuatara	MODERN SPECIES	51													ENSSPUG00000016398	ENSSPUG00000000001 #21	ENSSPUG00000000004 #21	SMO (ENSSPUG00000000005) #22	AHCYL2 (ENSSPUG00000000037) #23	STRIP2 (ENSSPUG00000000699) #24	NRF1 (ENSSPUG00000000758) #26	UBE2H (ENSSPUG00000000771) #27	ZC3HC1 (ENSSPUG00000000778) #28	KLHDC10 (ENSSPUG00000000803) #30	ENSSPUG00000000824	TMEM209 (ENSSPUG00000001002) #31	CPA2 (ENSSPUG00000001039) #33	ENSSPUG00000001137	CPA1 (ENSSPUG00000001161) #37	CEP41 (ENSSPUG00000001190)	MEST (ENSSPUG00000001293)	COPG2 (ENSSPUG00000001313)	TSGA13 (ENSSPUG00000001324)
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000160284	ENSGT01100000263561.A	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00940000160243 #17	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000160284	ENSGT01100000263561.A	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00940000165748	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Aves	ANCESTRAL SPECIES	1	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000160284	ENSGT01100000263561.A	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00940000165748	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Neognathae	ANCESTRAL SPECIES	3	ENSGT00660000097187	ENSGT00940000153772.A	ENSGT00940000156878	ENSGT00940000165441	ENSGT00940000161709	ENSGT00510000047270	ENSGT00940000159260	ENSGT00940000165748	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00390000005529.b	ENSGT00940000181929	ENSGT00940000153772.A	ENSGT00940000156878	ENSGT00940000165441	ENSGT00940000161709	ENSGT00510000047270	ENSGT00940000159260	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602
Passeriformes	ANCESTRAL SPECIES	3												ENSGT00940000157610.m	ENSGT00940000162777.a.b.b.b	ENSGT00940000162430.c	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00990000204718	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Great tit	MODERN SPECIES	10	FBH1 (ENSPMJG00000013099)	ANKRD16 (ENSPMJG00000013098)	GDI2 (ENSPMJG00000013097)	ENSPMJG00000013096	ENSPMJG00000013094	CALML3 (ENSPMJG00000013093)	NET1 (ENSPMJG00000013092)	ENSPMJG00000013090	UCN3 (ENSPMJG00000013089)	ENSPMJG00000013088	SLC35B4 (ENSPMJG00000013087)	ENSPMJG00000013086	ENSPMJG00000013085	ENSPMJG00000013083	TSPAN33 (ENSPMJG00000013082) #21	SMO (ENSPMJG00000013079) #22	AHCYL2 (ENSPMJG00000013078) #23	ENSPMJG00000013077	STRIP2 (ENSPMJG00000012452) #24	ENSPMJG00000012449	NRF1 (ENSPMJG00000012446) #26	UBE2H (ENSPMJG00000012444) #27	ZC3HC1 (ENSPMJG00000012440) #28	KLHDC10 (ENSPMJG00000012437) #30	ENSPMJG00000012435	TMEM209 (ENSPMJG00000012433) #31	CPA2 (ENSPMJG00000012431) #33	ENSPMJG00000012430	CPA1 (ENSPMJG00000012428) #37	CEP41 (ENSPMJG00000012425)	MEST (ENSPMJG00000012423)
Passeriformes_d	ANCESTRAL SPECIES	3												ENSGT00940000157610.m	ENSGT00940000162777.a.b.b.b	ENSGT00940000162430.c	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00990000204718	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Flycatcher	MODERN SPECIES	10	PPP6R2 (ENSFALG00000011363)	ENSFALG00000026422	ENSFALG00000024927	ENSFALG00000025152	ENSFALG00000026926	MAPK8IP2 (ENSFALG00000007266)	ENSFALG00000011971	ENSFALG00000027503	ENSFALG00000028603	ENSFALG00000001602	ENSFALG00000027389	ENSFALG00000023693	ENSFALG00000024173	TSPAN33 (ENSFALG00000001616) #21	ENSFALG00000022869	SMO (ENSFALG00000001622) #22	AHCYL2 (ENSFALG00000028499) #23	ENSFALG00000025776	STRIP2 (ENSFALG00000004945) #24	ENSFALG00000014096	NRF1 (ENSFALG00000028889) #26	UBE2H (ENSFALG00000004997) #27	ZC3HC1 (ENSFALG00000005006) #28	ENSFALG00000026110	KLHDC10 (ENSFALG00000023600) #30	TMEM209 (ENSFALG00000005065) #31	CPA2 (ENSFALG00000005078) #33	ENSFALG00000005091	CEP41 (ENSFALG00000005116)	MEST (ENSFALG00000024137)	COPG2 (ENSFALG00000005148)
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT01030000234937.b	ENSGT00390000009250	ENSGT00390000004323.a	ENSGT00390000014443	ENSGT00530000063702.a	ENSGT00390000016211	ENSGT00940000175182	ENSGT00940000155263	ENSGT00390000009899.b.d	ENSGT00390000005529.b	ENSGT00940000181929	ENSGT00940000153772.A	ENSGT00940000162777.a.b.b.b	ENSGT00940000157610.m	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00990000204718	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Medium ground finch	MODERN SPECIES	133													ENSGFOG00000003710	ENSGFOG00000003703	TSPAN33 (ENSGFOG00000003681) #21	SMO (ENSGFOG00000003352) #22	AHCYL2 (ENSGFOG00000002101) #23	STRIP2 (ENSGFOG00000001962) #24	ENSGFOG00000001937	NET1 (ENSGFOG00000001856)	ENSGFOG00000001820	ASB13 (ENSGFOG00000011710)	ENSGFOG00000011706	ENSGFOG00000011703	GDI2 (ENSGFOG00000011698)	ANKRD16 (ENSGFOG00000011690)	FBH1 (ENSGFOG00000011682)	ENSGFOG00000011677	COPG2 (ENSGFOG00000011670)	MEST (ENSGFOG00000011528)	CEP41 (ENSGFOG00000011497)
Passeroidea	ANCESTRAL SPECIES	59	ENSGT01030000234937.b	ENSGT00390000009250	ENSGT00390000004323.a	ENSGT00390000014443	ENSGT00530000063702.a	ENSGT00390000016211	ENSGT00940000175182	ENSGT00940000155263	ENSGT00390000009899.b.d	ENSGT00390000005529.b	ENSGT00940000181929	ENSGT00940000153772.A	ENSGT00940000162777.a.b.b.b	ENSGT00940000157610.m	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00990000204718	ENSGT00390000006835 #26
Zebra finch	MODERN SPECIES	72	SCO2 (ENSTGUG00000028468)	LMF2 (ENSTGUG00000016093)	MIOX (ENSTGUG00000020556)	ENSTGUG00000028280	ENSTGUG00000028543	ENSTGUG00000025539	ENSTGUG00000022109	ENSTGUG00000016248	ENSTGUG00000016228	ENSTGUG00000023454	ENSTGUG00000025712	ENSTGUG00000016050	ENSTGUG00000019072	ENSTGUG00000020961	TSPAN33 (ENSTGUG00000027289) #21	SMO (ENSTGUG00000001868) #22	AHCYL2 (ENSTGUG00000023593) #23	STRIP2 (ENSTGUG00000001874) #24	ENSTGUG00000025312	ENSTGUG00000019529	ENSTGUG00000024981	ENSTGUG00000019760	ENSTGUG00000024153	ENSTGUG00000029261	ENSTGUG00000027231	ENSTGUG00000029708	ENSTGUG00000024938
Common canary	MODERN SPECIES	332															TSPAN33 (ENSSCAG00000007763) #21	SMO (ENSSCAG00000007766) #22
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000154380.a	ENSGT00940000155263	ENSGT00390000009899.b	ENSGT00390000005529.b	ENSGT00940000153772.A	ENSGT00940000156878	ENSGT00940000165441	ENSGT00940000161709	ENSGT00510000047270	ENSGT00940000159260	ENSGT01030000234549.a.a.a.a.b #12	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Kakapo	MODERN SPECIES	20										ENSSHBG00005012269	OPN1SW (ENSSHBG00005012285) #12	CALU (ENSSHBG00005012307) #11	IRF5 (ENSSHBG00005012323) #19	TNPO3 (ENSSHBG00005012339) #20	TSPAN33 (ENSSHBG00005012359) #21	SMO (ENSSHBG00005012379) #22	AHCYL2 (ENSSHBG00005012421) #23	STRIP2 (ENSSHBG00005012450) #24	SMKR1 (ENSSHBG00005012493) #25	NRF1 (ENSSHBG00005012509) #26	UBE2H (ENSSHBG00005012549) #27	ZC3HC1 (ENSSHBG00005012560) #28	KLHDC10 (ENSSHBG00005012575) #30	TMEM209 (ENSSHBG00005012589) #31	CPA2 (ENSSHBG00005012601) #33	ENSSHBG00005012613	CPA1 (ENSSHBG00005012633) #37	CEP41 (ENSSHBG00005000103)	MEST (ENSSHBG00005000120)	COPG2 (ENSSHBG00005000133)	ENSSHBG00005000149
Golden eagle	MODERN SPECIES	21	GCC1 (ENSACCG00020000751)	ENSACCG00020000771	PAX4 (ENSACCG00020000810)	SND1 (ENSACCG00020000852)	ENSACCG00020000929	LRRC4 (ENSACCG00020000969)	ENSACCG00020000984	ENSACCG00020000999	ATP6V1F (ENSACCG00020001014) #15	ENSACCG00020002182	OPN1SW (ENSACCG00020002213) #12	CALU (ENSACCG00020002256) #11	IRF5 (ENSACCG00020002280) #19	TNPO3 (ENSACCG00020002315) #20	TSPAN33 (ENSACCG00020002331) #21	SMO (ENSACCG00020002346) #22	AHCYL2 (ENSACCG00020002382) #23	STRIP2 (ENSACCG00020002417) #24	SMKR1 (ENSACCG00020002441) #25	NRF1 (ENSACCG00020002465) #26	UBE2H (ENSACCG00020002503) #27	ZC3HC1 (ENSACCG00020002532) #28	KLHDC10 (ENSACCG00020002560) #30	TMEM209 (ENSACCG00020002593) #31	ENSACCG00020002618 #32	CPA2 (ENSACCG00020002634) #33	ENSACCG00020002649	CPA1 (ENSACCG00020002666) #37	CEP41 (ENSACCG00020002691)	MEST (ENSACCG00020002705)	COPG2 (ENSACCG00020002731)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000153772.A	ENSGT00660000097187	ENSGT00390000005529.b	ENSGT00390000009899.b	ENSGT00940000155263	ENSGT00940000154380.a	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00390000009250	ENSGT01010000222360.E.c #11	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000162777.a.i	ENSGT00940000153561.b.b	ENSGT00940000161709	ENSGT00940000165441	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00390000009899.b	ENSGT00940000155263	ENSGT00940000154380.a	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Phasianidae_b	ANCESTRAL SPECIES	9		ENSGT00940000161709	ENSGT00940000165441	ENSGT00940000156878	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00390000009899.b	ENSGT00940000155263	ENSGT00940000154380.a	ENSGT00390000016211	ENSGT00530000063702.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00940000159926 #19	ENSGT00530000063347.B #20	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a
Chicken	MODERN SPECIES		ENSGALG00010006267	ENSGALG00010006271	ARF5 (ENSGALG00010006288)	GCC1 (ENSGALG00010006300)	DENND6B (ENSGALG00010006327)	PPP6R2 (ENSGALG00010006347)	SBF1 (ENSGALG00010006372)	ADM2 (ENSGALG00010006410)	MIOX (ENSGALG00010007888)	LMF2 (ENSGALG00010006421)	NCAPH2 (ENSGALG00010006457)	SCO2 (ENSGALG00010006463)	IRF5 (ENSGALG00010005486) #19	TNPO3 (ENSGALG00010005492) #20	ENSGALG00010005496	SMO (ENSGALG00010005498) #22	AHCYL2 (ENSGALG00010005511) #23	STRIP2 (ENSGALG00010005524) #24	SMKR1 (ENSGALG00010007597) #25	NRF1 (ENSGALG00010005546) #26	UBE2H (ENSGALG00010006496) #27	ZC3HC1 (ENSGALG00010006528) #28	KLHDC10 (ENSGALG00010006532) #30	ENSGALG00010006536	TMEM209 (ENSGALG00010006548) #31	CPA2 (ENSGALG00010006552) #33	ENSGALG00010006563 #32	CPA5 (ENSGALG00010006566)	CPA1 (ENSGALG00010006574) #37	CEP41 (ENSGALG00010006581)	MEST (ENSGALG00010006603)
Turkey	MODERN SPECIES		ENSMGAG00000007116	ENSMGAG00000011441	ENSMGAG00000008311	ENSMGAG00000020647	ENSMGAG00000019721	ENSMGAG00000008562	ENSMGAG00000002631	DENND6B (ENSMGAG00000002574)	PPP6R2 (ENSMGAG00000004437)	SBF1 (ENSMGAG00000002514)	MIOX (ENSMGAG00000002742)	LMF2 (ENSMGAG00000002735)	NCAPH2 (ENSMGAG00000002891)	IRF5 (ENSMGAG00000022799) #19	TNPO3 (ENSMGAG00000002839) #20	SMO (ENSMGAG00000002781) #22	AHCYL2 (ENSMGAG00000002746) #23	STRIP2 (ENSMGAG00000002686) #24	NRF1 (ENSMGAG00000002652) #26	UBE2H (ENSMGAG00000002957) #27	ZC3HC1 (ENSMGAG00000002977) #28	KLHDC10 (ENSMGAG00000003019) #30	ENSMGAG00000003044	TMEM209 (ENSMGAG00000003060) #31	CPA2 (ENSMGAG00000003101) #33	ENSMGAG00000017747	CPA1 (ENSMGAG00000003148) #37	CEP41 (ENSMGAG00000003164)	MEST (ENSMGAG00000003275)	COPG2 (ENSMGAG00000003305)	ENSMGAG00000019908
Japanese quail	MODERN SPECIES		ENSCJPG00005000305	ENSCJPG00005000310	ENSCJPG00005000311	ENSCJPG00005000316	GCC1 (ENSCJPG00005000323)	DENND6B (ENSCJPG00005000338)	PPP6R2 (ENSCJPG00005000356)	SBF1 (ENSCJPG00005000380)	ENSCJPG00005000440	MIOX (ENSCJPG00005000444)	LMF2 (ENSCJPG00005000449)	NCAPH2 (ENSCJPG00005000460)	SCO2 (ENSCJPG00005000464)	IRF5 (ENSCJPG00005000471) #19	TNPO3 (ENSCJPG00005000477) #20	SMO (ENSCJPG00005000486) #22	AHCYL2 (ENSCJPG00005000499) #23	ENSCJPG00005000517	STRIP2 (ENSCJPG00005000519) #24	SMKR1 (ENSCJPG00005000523) #25	NRF1 (ENSCJPG00005000527) #26	UBE2H (ENSCJPG00005000542) #27	ZC3HC1 (ENSCJPG00005000551) #28	KLHDC10 (ENSCJPG00005000554) #30	TMEM209 (ENSCJPG00005000558) #31	CPA2 (ENSCJPG00005000563) #33	ENSCJPG00005000571	CPA1 (ENSCJPG00005000583) #37	CEP41 (ENSCJPG00005000597)	MEST (ENSCJPG00005000602)	COPG2 (ENSCJPG00005000679)
Anatidae	ANCESTRAL SPECIES	28															ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222	ENSGT00510000047602	ENSGT00390000016313.a.a	ENSGT00960000189028
Pink-footed goose	MODERN SPECIES	6															TSPAN33 (ENSABRG00000006691) #21	SMO (ENSABRG00000006696) #22	STRIP2 (ENSABRG00000006719) #24	AHCYL2 (ENSABRG00000006738) #23	ENSABRG00000006747	SMKR1 (ENSABRG00000006769) #25	NRF1 (ENSABRG00000006783) #26	UBE2H (ENSABRG00000006816) #27	ZC3HC1 (ENSABRG00000006835) #28	KLHDC10 (ENSABRG00000006842) #30	ENSABRG00000006909	TMEM209 (ENSABRG00000006915) #31	CPA2 (ENSABRG00000006926) #33	ENSABRG00000006941	ENSABRG00000006947 #37	CPA1 (ENSABRG00000006952) #37	CEP41 (ENSABRG00000006958)
Duck	MODERN SPECIES	1602																SMO (ENSAPLG00000007726) #22
Australian saltwater crocodile	MODERN SPECIES	49	ENSCPRG00005005456 #10	GCC1 (ENSCPRG00005005451)	DENND6B (ENSCPRG00005005431)	PPP6R2 (ENSCPRG00005005098)	SBF1 (ENSCPRG00005003782)	ADM2 (ENSCPRG00005003636)	MIOX (ENSCPRG00005003628)	LMF2 (ENSCPRG00005003619)	NCAPH2 (ENSCPRG00005003616)	SCO2 (ENSCPRG00005003614)	TYMP (ENSCPRG00005003609)	ODF3B (ENSCPRG00005003599)	ENSCPRG00005003597	IRF5 (ENSCPRG00005003592) #19	TNPO3 (ENSCPRG00005003583) #20	SMO (ENSCPRG00005003575) #22	AHCYL2 (ENSCPRG00005002992) #23	STRIP2 (ENSCPRG00005002397) #24	SMKR1 (ENSCPRG00005002340) #25	NRF1 (ENSCPRG00005002334) #26	UBE2H (ENSCPRG00005002316) #27	ZC3HC1 (ENSCPRG00005002312) #28	KLHDC10 (ENSCPRG00005002307) #30	ENSCPRG00005002297	TMEM209 (ENSCPRG00005002290) #31	SSMEM1 (ENSCPRG00005002279) #32	CPA2 (ENSCPRG00005002274) #33	CPA1 (ENSCPRG00005002262) #37	CEP41 (ENSCPRG00005002252)	MEST (ENSCPRG00005002243)	COPG2 (ENSCPRG00005002198)
Cryptodira	ANCESTRAL SPECIES	11						ENSGT00530000063347.B #20	ENSGT00940000159926 #19	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222
Testudinoidea	ANCESTRAL SPECIES	4						ENSGT00530000063347.B #20	ENSGT00940000159926 #19	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b.a #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222.e
Testudinidae	ANCESTRAL SPECIES	12						ENSGT00530000063347.B #20	ENSGT00940000159926 #19	ENSGT01010000222360.E.c #11	ENSGT01030000234549.a.a.a.a.b #12	ENSGT00940000159122 #13	ENSGT00940000153588.a.b.a #18	ENSGT00390000013208 #15	ENSGT00390000003224.B #16	ENSGT00940000160243 #17	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222.e	ENSGT00510000047602
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005012039	ENSGEVG00005011824	ENSGEVG00005011748	ENSGEVG00005011660	ENSGEVG00005011590	TNPO3 (ENSGEVG00005011559) #20	IRF5 (ENSGEVG00005011520) #19	CALU (ENSGEVG00005011482) #11	OPN1SW (ENSGEVG00005011418) #12	ENSGEVG00005011240 #13	FLNC (ENSGEVG00005008504) #18	ATP6V1F (ENSGEVG00005007853) #15	ATP6V1FNB (ENSGEVG00005007839) #16	KCP (ENSGEVG00005007588) #17	TSPAN33 (ENSGEVG00005007520) #21	SMO (ENSGEVG00005007448) #22	AHCYL2 (ENSGEVG00005006985) #23	STRIP2 (ENSGEVG00005006654) #24	ENSGEVG00005006597	NRF1 (ENSGEVG00005006539) #26	UBE2H (ENSGEVG00005006498) #27	ZC3HC1 (ENSGEVG00005006460) #28	KLHDC10 (ENSGEVG00005006423) #30	TMEM209 (ENSGEVG00005006382) #31	ENSGEVG00005006368 #32	CPA2 (ENSGEVG00005006274) #33	ENSGEVG00005006173	CPA1 (ENSGEVG00005006035) #37	CEP41 (ENSGEVG00005005997)	MEST (ENSGEVG00005005959)	COPG2 (ENSGEVG00005005912)
Abingdon island giant tortoise	MODERN SPECIES	764														ENSCABG00000010172	TSPAN33 (ENSCABG00000010170) #21	SMO (ENSCABG00000010168) #22	ENSCABG00000010167	AHCYL2 (ENSCABG00000010141) #23	STRIP2 (ENSCABG00000010140) #24	SMKR1 (ENSCABG00000010138) #25	NRF1 (ENSCABG00000010137) #26	UBE2H (ENSCABG00000010132) #27	ZC3HC1 (ENSCABG00000010047) #28	KLHDC10 (ENSCABG00000010041) #30	TMEM209 (ENSCABG00000010040) #31	SSMEM1 (ENSCABG00000010039) #32	CPA2 (ENSCABG00000010038) #33	ENSCABG00000010036	CPA1 (ENSCABG00000010035) #37	ENSCABG00000010032
Emydidae	ANCESTRAL SPECIES	53															ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a.f #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00390000015907 #32	ENSGT00940000160121 #33	ENSGT00940000168513	ENSGT00940000158082.b #37	ENSGT00390000002222.e	ENSGT00510000047602
Three-toed box turtle	MODERN SPECIES	28															TSPAN33 (ENSTMTG00000004762) #21	SMO (ENSTMTG00000004795) #22	AHCYL2 (ENSTMTG00000004826) #23	STRIP2 (ENSTMTG00000004877) #24	SMKR1 (ENSTMTG00000004911) #25	NRF1 (ENSTMTG00000004925) #26	UBE2H (ENSTMTG00000004997) #27	ZC3HC1 (ENSTMTG00000005015) #28	KLHDC10 (ENSTMTG00000005040) #30	TMEM209 (ENSTMTG00000005086) #31	CPA2 (ENSTMTG00000005293) #33	ENSTMTG00000005353	CPA1 (ENSTMTG00000005400) #37	CEP41 (ENSTMTG00000005462)	MEST (ENSTMTG00000005760)	COPG2 (ENSTMTG00000005795)	FBH1 (ENSTMTG00000005845)
painted turtle	MODERN SPECIES	882														ENSCPBG00000017548	TSPAN33 (ENSCPBG00000017547) #21	SMO (ENSCPBG00000017534) #22	AHCYL2 (ENSCPBG00000017527) #23	STRIP2 (ENSCPBG00000017526) #24	SMKR1 (ENSCPBG00000017525) #25	NRF1 (ENSCPBG00000017524) #26	UBE2H (ENSCPBG00000017520) #27	ZC3HC1 (ENSCPBG00000017519) #28	KLHDC10 (ENSCPBG00000017517) #30	ENSCPBG00000017515	TMEM209 (ENSCPBG00000017512) #31	ENSCPBG00000017511 #32	CPA2 (ENSCPBG00000017508) #33	ENSCPBG00000017507	CPA1 (ENSCPBG00000017506) #37	CEP41 (ENSCPBG00000017505)	MEST (ENSCPBG00000017503)
Chinese turtle	MODERN SPECIES	869	ENSPSIG00000012208	ENSPSIG00000001443	MKLN1 (ENSPSIG00000012017)	PODXL (ENSPSIG00000012013)	PLXNA4 (ENSPSIG00000010715)	ENSPSIG00000010702	CHCHD3 (ENSPSIG00000010445)	EXOC4 (ENSPSIG00000009498)	LRGUK (ENSPSIG00000009482)	SLC35B4 (ENSPSIG00000008790)	ENSPSIG00000008769	ENSPSIG00000007861	ENSPSIG00000007836	UCN3 (ENSPSIG00000001434)	TSPAN33 (ENSPSIG00000007096) #21	SMO (ENSPSIG00000006958) #22	AHCYL2 (ENSPSIG00000006422) #23	STRIP2 (ENSPSIG00000017120) #24	NRF1 (ENSPSIG00000016969) #26	ENSPSIG00000001426	UBE2H (ENSPSIG00000016829) #27	ZC3HC1 (ENSPSIG00000016646) #28	ENSPSIG00000016635	KLHDC10 (ENSPSIG00000016603) #30	ENSPSIG00000016577	TMEM209 (ENSPSIG00000016482) #31	CPA2 (ENSPSIG00000016153) #33	ENSPSIG00000016147 #37	ENSPSIG00000016145 #37	CEP41 (ENSPSIG00000015804)	MEST (ENSPSIG00000015798)
Anura	ANCESTRAL SPECIES	5	ENSGT00940000159260	ENSGT00390000011772	ENSGT00550000074976	ENSGT00530000064743	ENSGT00730000111591	ENSGT00390000008126	ENSGT00530000063347.B #20	ENSGT00940000159926 #19	ENSGT00940000165748	ENSGT00940000160243 #17	ENSGT00390000003224.B #16	ENSGT00390000013208 #15	ENSGT00940000153588.a.b #18	ENSGT00940000159122 #13	ENSGT00940000159484 #21	ENSGT00940000157206 #22	ENSGT00950000182981.b.f.a #23	ENSGT00400000022095.a #24	ENSGT00640000091917 #25	ENSGT00390000006835 #26	ENSGT00390000004852.a.b #27	ENSGT00390000006086 #28	ENSGT00940000155977 #30	ENSGT00390000016897	ENSGT00390000013963 #31	ENSGT00940000160121 #33	ENSGT00390000002222	ENSGT00940000158082.b #37	ENSGT00510000047602	ENSGT00390000016313.a.a	ENSGT00940000160568
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000026768	TNPO3 (ENSLLEG00000026939) #20	IRF5 (ENSLLEG00000027385) #19	ENSLLEG00000027487	ENSLLEG00000027521	ENSLLEG00000027732	KCP (ENSLLEG00000027772) #17	ATP6V1FNB (ENSLLEG00000027986) #16	ENSLLEG00000028030 #15	ENSLLEG00000028064 #15	FLNC (ENSLLEG00000028182) #18	ENSLLEG00000029059	ENSLLEG00000029067 #13	ENSLLEG00000029092	TSPAN33 (ENSLLEG00000029115) #21	SMO (ENSLLEG00000029156) #22	AHCYL2 (ENSLLEG00000029233) #23	STRIP2 (ENSLLEG00000029585) #24	SMKR1 (ENSLLEG00000029652) #25	NRF1 (ENSLLEG00000029679) #26	UBE2H (ENSLLEG00000029719) #27	ZC3HC1 (ENSLLEG00000029750) #28	ENSLLEG00000029793 #30	ENSLLEG00000029982	MCOLN1 (ENSLLEG00000030164)	PGLYRP2 (ENSLLEG00000030198)	RASAL3 (ENSLLEG00000030225)	WIZ (ENSLLEG00000030262)	AKAP8L (ENSLLEG00000030326)	ENSLLEG00000030372	ENSLLEG00000030385
Frog	MODERN SPECIES	3	lep (ENSXETG00000042746)	rbm28 (ENSXETG00000009271)	XB5749398 [provisional] (ENSXETG00000027673)	prrt4 (ENSXETG00000034558)	polr1h (ENSXETG00000040925)	ENSXETG00000047103	tnpo3 (ENSXETG00000015009) #20	irf5 (ENSXETG00000015005) #19	ENSXETG00000037895	kcp (ENSXETG00000014993) #17	ATP6V1FNB (ENSXETG00000033291) #16	atp6v1f (ENSXETG00000041460) #15	flnc (ENSXETG00000014956) #18	ccdc136 (ENSXETG00000014950) #13	tspan33 (ENSXETG00000014947) #21	smo (ENSXETG00000014939) #22	ahcyl2 (ENSXETG00000014902) #23	strip2 (ENSXETG00000033390) #24	nrf1 (ENSXETG00000016306) #26	ENSXETG00000048728	ube2h (ENSXETG00000025415) #27	zc3hc1 (ENSXETG00000033900) #28	klhdc10 (ENSXETG00000016301) #30	XB5937757 [provisional] (ENSXETG00000021421)	fchsd2 (ENSXETG00000016299) #31	cep41 (ENSXETG00000030628)	cpa1 (ENSXETG00000016293) #37	mest (ENSXETG00000025413)	copg2 (ENSXETG00000016290)	ucn3 (ENSXETG00000016289)	ENSXETG00000038527
Coelacanth	MODERN SPECIES	1151										ENSLACG00000013171	ENSLACG00000012133	ENSLACG00000009423	ENSLACG00000008045	ENSLACG00000006764	TSPAN33 (ENSLACG00000003967) #21	SMO (ENSLACG00000002467) #22	ENSLACG00000001522