Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Glires	ANCESTRAL SPECIES	2	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00940000164942 #18	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Eurasian red squirrel	MODERN SPECIES	1	PARP9 (ENSSVLG00005006786) #7	KPNA1 (ENSSVLG00005006713) #8	WDR5B (ENSSVLG00005006686) #9	ENSSVLG00005006652 #10	FAM162A (ENSSVLG00005006569) #11	MIX23 (ENSSVLG00005006490) #12	CSTA (ENSSVLG00005006443) #13	CASR (ENSSVLG00005006344) #14	CD86 (ENSSVLG00005006311) #15	ILDR1 (ENSSVLG00005006124) #16	SLC15A2 (ENSSVLG00005005862) #17	ENSSVLG00005005791 #18	EAF2 (ENSSVLG00005005767) #19	IQCB1 (ENSSVLG00005005618) #20	GOLGB1 (ENSSVLG00005005470) #21	HCLS1 (ENSSVLG00005005312) #22	FBXO40 (ENSSVLG00005005263) #23	ENSSVLG00005005253 #24	ENSSVLG00005005232 #25	POLQ (ENSSVLG00005005121) #26	STXBP5L (ENSSVLG00005004686) #27	ENSSVLG00005004540 #28	RABL3 (ENSSVLG00005014450) #29	HGD (ENSSVLG00005014290) #30	NDUFB4 (ENSSVLG00005014222) #31	FSTL1 (ENSSVLG00005013992) #32	LRRC58 (ENSSVLG00005013737) #33	GPR156 (ENSSVLG00005013678) #34	ENSSVLG00005013550 #35	GSK3B (ENSSVLG00005013429) #36	NR1I2 (ENSSVLG00005013118) #37
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00940000164942 #18	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Marmotini_b	ANCESTRAL SPECIES	36	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00940000164942 #18	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.`b #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Arctic ground squirrel	MODERN SPECIES	5	ENSUPAG00010020572 #7	ENSUPAG00010020569 #7	ENSUPAG00010020563 #8	WDR5B (ENSUPAG00010020556) #9	FAM162A (ENSUPAG00010020548) #11	MIX23 (ENSUPAG00010020528) #12	CSTA (ENSUPAG00010020512) #13	CASR (ENSUPAG00010020494) #14	ENSUPAG00010020488 #15	ILDR1 (ENSUPAG00010020459) #16	SLC15A2 (ENSUPAG00010020373) #17	ENSUPAG00010020361 #18	EAF2 (ENSUPAG00010020354) #19	IQCB1 (ENSUPAG00010020333) #20	GOLGB1 (ENSUPAG00010020323) #21	HCLS1 (ENSUPAG00010020307) #22	FBXO40 (ENSUPAG00010020299) #23	POLQ (ENSUPAG00010020281) #26	STXBP5L (ENSUPAG00010020087) #27	ENSUPAG00010020082 #28	RABL3 (ENSUPAG00010020073) #29	HGD (ENSUPAG00010020051) #30	NDUFB4 (ENSUPAG00010020045) #31	FSTL1 (ENSUPAG00010020040) #32	LRRC58 (ENSUPAG00010020027) #33	GPR156 (ENSUPAG00010020021) #34	GSK3B (ENSUPAG00010020003) #36	NR1I2 (ENSUPAG00010019993) #37	CFAP91 (ENSUPAG00010019983)	POPDC2 (ENSUPAG00010019975)	PLA1A (ENSUPAG00010019964)
Squirrel	MODERN SPECIES	136	PARP14 (ENSSTOG00000019423)	DTX3L (ENSSTOG00000013445)	PARP9 (ENSSTOG00000013438) #7	KPNA1 (ENSSTOG00000026751) #8	WDR5B (ENSSTOG00000027025) #9	FAM162A (ENSSTOG00000004432) #11	MIX23 (ENSSTOG00000004419) #12	CSTA (ENSSTOG00000028515) #13	CASR (ENSSTOG00000004400) #14	ENSSTOG00000002652 #15	ILDR1 (ENSSTOG00000010082) #16	SLC15A2 (ENSSTOG00000010060) #17	EAF2 (ENSSTOG00000019911) #19	IQCB1 (ENSSTOG00000010040) #20	GOLGB1 (ENSSTOG00000010027) #21	HCLS1 (ENSSTOG00000010016) #22	FBXO40 (ENSSTOG00000021524) #23	POLQ (ENSSTOG00000009954) #26	STXBP5L (ENSSTOG00000009925) #27	GTF2E1 (ENSSTOG00000015735) #28	RABL3 (ENSSTOG00000019452) #29	HGD (ENSSTOG00000015729) #30	ENSSTOG00000020092 #31	FSTL1 (ENSSTOG00000001471) #32	LRRC58 (ENSSTOG00000022670) #33	GPR156 (ENSSTOG00000026101) #34	GSK3B (ENSSTOG00000014997) #36	NR1I2 (ENSSTOG00000014988) #37	CFAP91 (ENSSTOG00000014975)	COX17 (ENSSTOG00000032615)	POPDC2 (ENSSTOG00000023809)
Alpin marmot	MODERN SPECIES	19	DTX3L (ENSMMMG00000013433)	PARP9 (ENSMMMG00000013448) #7	KPNA1 (ENSMMMG00000013462) #8	WDR5B (ENSMMMG00000013487) #9	ENSMMMG00000013490 #11	MIX23 (ENSMMMG00000013503) #12	CSTA (ENSMMMG00000013578) #13	CASR (ENSMMMG00000013617) #14	CD86 (ENSMMMG00000013662) #15	ILDR1 (ENSMMMG00000013668) #16	SLC15A2 (ENSMMMG00000013727) #17	ENSMMMG00000013888 #18	ENSMMMG00000013892	IQCB1 (ENSMMMG00000013895) #20	GOLGB1 (ENSMMMG00000013920) #21	HCLS1 (ENSMMMG00000013942) #22	FBXO40 (ENSMMMG00000013972) #23	POLQ (ENSMMMG00000013983) #26	STXBP5L (ENSMMMG00000014091) #27	GTF2E1 (ENSMMMG00000014676) #28	RABL3 (ENSMMMG00000014685) #29	HGD (ENSMMMG00000014696) #30	NDUFB4 (ENSMMMG00000014710) #31	FSTL1 (ENSMMMG00000014715) #32	ENSMMMG00000014738 #33	WWTR1 (ENSMMMG00000014742)	ENSMMMG00000014753	COMMD2 (ENSMMMG00000014762)	ANKUB1 (ENSMMMG00000014769)	ENSMMMG00000014779	ENSMMMG00000014788
Hystricomorpha	ANCESTRAL SPECIES	18	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Hystricomorpha_a	ANCESTRAL SPECIES	36	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.l.b #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Guinea pig	MODERN SPECIES	35							ENSCPOG00000026689	ENSCPOG00000033142 #13	CASR (ENSCPOG00000013000) #14	CD86 (ENSCPOG00000020973) #15	ILDR1 (ENSCPOG00000013173) #16	SLC15A2 (ENSCPOG00000006934) #17	EAF2 (ENSCPOG00000006427) #19	IQCB1 (ENSCPOG00000006419) #20	GOLGB1 (ENSCPOG00000006405) #21	HCLS1 (ENSCPOG00000006399) #22	FBXO40 (ENSCPOG00000013228) #23	ENSCPOG00000026454	STXBP5L (ENSCPOG00000008283) #27	GTF2E1 (ENSCPOG00000009651) #28	ENSCPOG00000022678	RABL3 (ENSCPOG00000009645) #29	HGD (ENSCPOG00000022275) #30	NDUFB4 (ENSCPOG00000035194) #31	FSTL1 (ENSCPOG00000033880) #32	ENSCPOG00000040381	LRRC58 (ENSCPOG00000007047) #33	GPR156 (ENSCPOG00000020772) #34	GSK3B (ENSCPOG00000014311) #36	NR1I2 (ENSCPOG00000020161) #37	CFAP91 (ENSCPOG00000015496)
Hystricomorpha_b	ANCESTRAL SPECIES	32	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.l.b #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Long-tailed chinchilla	MODERN SPECIES	134	KPNA1 (ENSCLAG00000010516) #8	WDR5B (ENSCLAG00000017883) #9	FAM162A (ENSCLAG00000013224) #11	MIX23 (ENSCLAG00000011614) #12	CSTA (ENSCLAG00000012262) #13	ENSCLAG00000010972	CASR (ENSCLAG00000014611) #14	CD86 (ENSCLAG00000011396) #15	ILDR1 (ENSCLAG00000010123) #16	SLC15A2 (ENSCLAG00000014172) #17	ENSCLAG00000016737	ENSCLAG00000014988	EAF2 (ENSCLAG00000014487) #19	IQCB1 (ENSCLAG00000014748) #20	GOLGB1 (ENSCLAG00000011762) #21	HCLS1 (ENSCLAG00000013865) #22	FBXO40 (ENSCLAG00000012408) #23	POLQ (ENSCLAG00000008388) #26	STXBP5L (ENSCLAG00000008959) #27	GTF2E1 (ENSCLAG00000013201) #28	RABL3 (ENSCLAG00000010855) #29	HGD (ENSCLAG00000009244) #30	NDUFB4 (ENSCLAG00000015299) #31	FSTL1 (ENSCLAG00000009617) #32	ENSCLAG00000013373	LRRC58 (ENSCLAG00000013874) #33	GPR156 (ENSCLAG00000011487) #34	GSK3B (ENSCLAG00000010847) #36	NR1I2 (ENSCLAG00000012141) #37	CFAP91 (ENSCLAG00000012737)	COX17 (ENSCLAG00000009645)
Degu	MODERN SPECIES	188	DTX3L (ENSODEG00000008507)	PARP9 (ENSODEG00000010249) #7	KPNA1 (ENSODEG00000008059) #8	ENSODEG00000019490	WDR5B (ENSODEG00000019471) #9	FAM162A (ENSODEG00000008867) #11	ENSODEG00000008197 #12	CSTA (ENSODEG00000007909) #13	CASR (ENSODEG00000009812) #14	ENSODEG00000019503	ILDR1 (ENSODEG00000007516) #16	SLC15A2 (ENSODEG00000010727) #17	EAF2 (ENSODEG00000007603) #19	IQCB1 (ENSODEG00000007907) #20	GOLGB1 (ENSODEG00000007972) #21	HCLS1 (ENSODEG00000009049) #22	ENSODEG00000008646	FBXO40 (ENSODEG00000008932) #23	POLQ (ENSODEG00000007851) #26	STXBP5L (ENSODEG00000007458) #27
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000001892	DTX3L (ENSHGLG00000001868)	ENSHGLG00000001733 #8	WDR5B (ENSHGLG00000047370) #9	FAM162A (ENSHGLG00000048091) #11	CCDC58 (ENSHGLG00000040686) #12	ENSHGLG00000045666	CSTA (ENSHGLG00000050326) #13	CASR (ENSHGLG00000001536) #14	CD86 (ENSHGLG00000001437) #15	ILDR1 (ENSHGLG00000001288) #16	SLC15A2 (ENSHGLG00000001129) #17	EAF2 (ENSHGLG00000019361) #19	IQCB1 (ENSHGLG00000019300) #20	GOLGB1 (ENSHGLG00000014378) #21	HCLS1 (ENSHGLG00000019092) #22	FBXO40 (ENSHGLG00000010736) #23	ENSHGLG00000012935 #26	ENSHGLG00000043147	STXBP5L (ENSHGLG00000016821) #27	ENSHGLG00000011218	ENSHGLG00000048017	ENSHGLG00000049436	GTF2E1 (ENSHGLG00000014027) #28	RABL3 (ENSHGLG00000014491) #29	HGD (ENSHGLG00000011483) #30	ENSHGLG00000021124	ENSHGLG00000039134	ENSHGLG00000046072 #31	FSTL1 (ENSHGLG00000042537) #32	ENSHGLG00000016072
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Kangaroo rat	MODERN SPECIES	364	Hspbap1 (ENSDORG00000001682)	Parp14 (ENSDORG00000000690)	Dtx3l (ENSDORG00000003173)	Parp9 (ENSDORG00000003171) #7	Kpna1 (ENSDORG00000003170) #8	Wdr5b (ENSDORG00000003169) #9	Fam162a (ENSDORG00000003168) #11	Ccdc58 (ENSDORG00000003167) #12	ENSDORG00000003164 #13	Casr (ENSDORG00000003162) #14	Ildr1 (ENSDORG00000027522) #16	Slc15a2 (ENSDORG00000001116) #17	Eaf2 (ENSDORG00000001115) #19	Iqcb1 (ENSDORG00000001113) #20	Golgb1 (ENSDORG00000002423) #21	Hcls1 (ENSDORG00000002422) #22	Fbxo40 (ENSDORG00000002421) #23	Polq (ENSDORG00000002416) #26	Stxbp5l (ENSDORG00000007287) #27	Gtf2e1 (ENSDORG00000007285) #28	ENSDORG00000007284	Hgd (ENSDORG00000014504) #30	Ndufb4 (ENSDORG00000014502) #31	Fstl1 (ENSDORG00000002235) #32	Btnl12 (ENSDORG00000029670)	Lrrc58 (ENSDORG00000008401) #33	Gpr156 (ENSDORG00000006062) #34	Gsk3b (ENSDORG00000023434) #36	Nr1i2 (ENSDORG00000003966) #37	Cfap91 (ENSDORG00000011559)	Popdc2 (ENSDORG00000009735)
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Lesser Egyptian jerboa	MODERN SPECIES	137		Dtx3l (ENSJJAG00000023333)	Parp9 (ENSJJAG00000023676) #7	Kpna1 (ENSJJAG00000000134) #8	Wdr5b (ENSJJAG00000000297) #9	Fam162a (ENSJJAG00000000903) #11	ENSJJAG00000003637 #12	ENSJJAG00000005528 #13	Casr (ENSJJAG00000009683) #14	ENSJJAG00000010789 #15	Ildr1 (ENSJJAG00000011606) #16	Slc15a2 (ENSJJAG00000013093) #17	ENSJJAG00000014936	Iqcb1 (ENSJJAG00000015154) #20	Golgb1 (ENSJJAG00000016394) #21	Hcls1 (ENSJJAG00000015789) #22	Fbxo40 (ENSJJAG00000016012) #23	Stxbp5l (ENSJJAG00000019547) #27	Gtf2e1 (ENSJJAG00000023373) #28	Rabl3 (ENSJJAG00000023553) #29	Hgd (ENSJJAG00000000068) #30	Ndufb4 (ENSJJAG00000000112) #31	Fstl1 (ENSJJAG00000000598) #32	Btnl12 (ENSJJAG00000003184)	Lrrc58 (ENSJJAG00000005130) #33	Gpr156 (ENSJJAG00000007798) #34	Gsk3b (ENSJJAG00000010506) #36	Nr1i2 (ENSJJAG00000011379) #37	Cfap91 (ENSJJAG00000012537)	Cox17 (ENSJJAG00000012774)	Popdc2 (ENSJJAG00000013185)
Muroidea	ANCESTRAL SPECIES	11	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Upper Galilee mountains blind mole rat	MODERN SPECIES	1215	Parp14 (ENSNGAG00000024058)	Dtx3l (ENSNGAG00000024127)	Parp9 (ENSNGAG00000013531) #7	Kpna1 (ENSNGAG00000019753) #8	Wdr5b (ENSNGAG00000013754) #9	Fam162a (ENSNGAG00000024111) #11	Ccdc58 (ENSNGAG00000021453) #12	ENSNGAG00000000990 #13	Casr (ENSNGAG00000015593) #14	ENSNGAG00000012890 #15	Ildr1 (ENSNGAG00000013791) #16	Slc15a2 (ENSNGAG00000020032) #17	Eaf2 (ENSNGAG00000018733) #19	Iqcb1 (ENSNGAG00000024265) #20	Golgb1 (ENSNGAG00000020167) #21	Hcls1 (ENSNGAG00000022704) #22	Fbxo40 (ENSNGAG00000004209) #23	Polq (ENSNGAG00000024216) #26	Stxbp5l (ENSNGAG00000015316) #27	Gtf2e1 (ENSNGAG00000018181) #28	Rabl3 (ENSNGAG00000001939) #29	Hgd (ENSNGAG00000021388) #30	Ndufb4 (ENSNGAG00000019446) #31	Fstl1 (ENSNGAG00000009480) #32	Btnl12 (ENSNGAG00000023554)	Lrrc58 (ENSNGAG00000023258) #33	Gpr156 (ENSNGAG00000010795) #34	Gsk3b (ENSNGAG00000002108) #36	Nr1i2 (ENSNGAG00000023122) #37	Cfap91 (ENSNGAG00000022679)	Cox17 (ENSNGAG00000024232)
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Murinae	ANCESTRAL SPECIES	13	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.i.a #13	ENSGT00940000155717.i.b.a.a.b.b #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Mus	ANCESTRAL SPECIES	13	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.i.a #13	ENSGT00940000155717.i.b.a.a.b.b #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Mus_A	ANCESTRAL SPECIES	18	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.i.a #13	ENSGT00940000155717.i.b.a.a.b.b #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.x #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Mus_B	ANCESTRAL SPECIES	18	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.i.a #13	ENSGT00940000155717.i.b.a.a.b.a #13	ENSGT00940000155717.i.b.a.a.b.b #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.x #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Mus_C	ANCESTRAL SPECIES	12	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.i.a #13	ENSGT00940000155717.i.b.a.a.b.a #13	ENSGT00940000155717.i.b.a.a.b.b #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.x #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133.h #31	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37
Steppe mouse	MODERN SPECIES	19							Casr (ENSMSIG00000016850) #14	ENSMSIG00000016961	ENSMSIG00000016968	Cd86 (ENSMSIG00000016983) #15	Ildr1 (ENSMSIG00000017015) #16	Slc15a2 (ENSMSIG00000017096) #17	Eaf2 (ENSMSIG00000017229) #19	Iqcb1 (ENSMSIG00000017244) #20	Golgb1 (ENSMSIG00000017297) #21	Hcls1 (ENSMSIG00000017414) #22	Fbxo40 (ENSMSIG00000017504) #23	Polq (ENSMSIG00000017530) #26	ENSMSIG00000017745	Stxbp5l (ENSMSIG00000017754) #27	ENSMSIG00000018266	Gtf2e1 (ENSMSIG00000018274) #28	Rabl3 (ENSMSIG00000018289) #29	ENSMSIG00000018320	Hgd (ENSMSIG00000018328) #30	ENSMSIG00000018377 #31	ENSMSIG00000018386	Fstl1 (ENSMSIG00000018393) #32	Btnl12 (ENSMSIG00000018429)	Lrrc58 (ENSMSIG00000018454) #33	Gpr156 (ENSMSIG00000018477) #34
spretus	MODERN SPECIES	7	Kpna1 (MGP_SPRETEiJ_G0021607) #8	Wdr5b (MGP_SPRETEiJ_G0021608) #9	Fam162a (MGP_SPRETEiJ_G0021609) #11	Ccdc58 (MGP_SPRETEiJ_G0021610) #12	MGP_SPRETEiJ_G0021611 #13	MGP_SPRETEiJ_G0021612 #13	MGP_SPRETEiJ_G0021613 #13	Stfa3 (MGP_SPRETEiJ_G0021615) #13	Casr (MGP_SPRETEiJ_G0021616) #14	Cd86 (MGP_SPRETEiJ_G0021617) #15	Ildr1 (MGP_SPRETEiJ_G0021618) #16	Slc15a2 (MGP_SPRETEiJ_G0021619) #17	Eaf2 (MGP_SPRETEiJ_G0021620) #19	Iqcb1 (MGP_SPRETEiJ_G0021621) #20	Golgb1 (MGP_SPRETEiJ_G0021622) #21	Hcls1 (MGP_SPRETEiJ_G0021623) #22	Fbxo40 (MGP_SPRETEiJ_G0021624) #23	Polq (MGP_SPRETEiJ_G0021625) #26	Stxbp5l (MGP_SPRETEiJ_G0021626) #27	Gtf2e1 (MGP_SPRETEiJ_G0021627) #28	Rabl3 (MGP_SPRETEiJ_G0021628) #29	Hgd (MGP_SPRETEiJ_G0021629) #30	Ndufb4 (MGP_SPRETEiJ_G0021630) #31	Fstl1 (MGP_SPRETEiJ_G0021631) #32	Btnl12 (MGP_SPRETEiJ_G0021632)	Lrrc58 (MGP_SPRETEiJ_G0021633) #33	Gpr156 (MGP_SPRETEiJ_G0021634) #34	Gsk3b (MGP_SPRETEiJ_G0021635) #36	Nr1i2 (MGP_SPRETEiJ_G0021636) #37	Cfap91 (MGP_SPRETEiJ_G0021637)	MGP_SPRETEiJ_G0021638
Mouse	MODERN SPECIES	7	Cstdc4 (ENSMUSG00000079597) #13	Csta3 (ENSMUSG00000094733) #13	Csta2 (ENSMUSG00000095620) #13	Stfa1 (ENSMUSG00000071562) #13	Cstdc6 (ENSMUSG00000079594) #13	Cstdc5 (ENSMUSG00000071561) #13	Stfa2 (ENSMUSG00000022902) #13	Stfa3 (ENSMUSG00000054905) #13	Casr (ENSMUSG00000051980) #14	Cd86 (ENSMUSG00000022901) #15	Ildr1 (ENSMUSG00000022900) #16	Slc15a2 (ENSMUSG00000022899) #17	Eaf2 (ENSMUSG00000022838) #19	Iqcb1 (ENSMUSG00000022837) #20	Golgb1 (ENSMUSG00000034243) #21	Hcls1 (ENSMUSG00000022831) #22	Fbxo40 (ENSMUSG00000047746) #23	Polq (ENSMUSG00000034206) #26	Stxbp5l (ENSMUSG00000022829) #27	Gtf2e1 (ENSMUSG00000022828) #28	Rabl3 (ENSMUSG00000022827) #29	Hgd (ENSMUSG00000022821) #30	Ndufb4 (ENSMUSG00000022820) #31	Fstl1 (ENSMUSG00000022816) #32	Btnl12 (ENSMUSG00000108763)	Lrrc58 (ENSMUSG00000034158) #33	Gpr156 (ENSMUSG00000046961) #34	Gsk3b (ENSMUSG00000022812) #36	Nr1i2 (ENSMUSG00000022809) #37	Cfap91 (ENSMUSG00000022805)	Cox17 (ENSMUSG00000046516)
Ryukyu mouse	MODERN SPECIES	7	Parp9 (MGP_CAROLIEiJ_G0020708) #7	Kpna1 (MGP_CAROLIEiJ_G0020709) #8	Wdr5b (MGP_CAROLIEiJ_G0020710) #9	Fam162a (MGP_CAROLIEiJ_G0020711) #11	Ccdc58 (MGP_CAROLIEiJ_G0020712) #12	MGP_CAROLIEiJ_G0020713 #13	MGP_CAROLIEiJ_G0020714	Stfa3 (MGP_CAROLIEiJ_G0020715) #13	Casr (MGP_CAROLIEiJ_G0020716) #14	Cd86 (MGP_CAROLIEiJ_G0020717) #15	Ildr1 (MGP_CAROLIEiJ_G0020718) #16	Slc15a2 (MGP_CAROLIEiJ_G0020719) #17	Eaf2 (MGP_CAROLIEiJ_G0020720) #19	Iqcb1 (MGP_CAROLIEiJ_G0020721) #20	Golgb1 (MGP_CAROLIEiJ_G0020722) #21	Hcls1 (MGP_CAROLIEiJ_G0020723) #22	Fbxo40 (MGP_CAROLIEiJ_G0020724) #23	Polq (MGP_CAROLIEiJ_G0020725) #26	MGP_CAROLIEiJ_G0020726 #27	MGP_CAROLIEiJ_G0020727 #28	Rabl3 (MGP_CAROLIEiJ_G0020728) #29	Hgd (MGP_CAROLIEiJ_G0020729) #30	Ndufb4 (MGP_CAROLIEiJ_G0020730) #31	Fstl1 (MGP_CAROLIEiJ_G0020731) #32	Btnl12 (MGP_CAROLIEiJ_G0020732)	MGP_CAROLIEiJ_G0020733 #33	MGP_CAROLIEiJ_G0020734 #33	Gpr156 (MGP_CAROLIEiJ_G0020735) #34	Gsk3b (MGP_CAROLIEiJ_G0020736) #36	Nr1i2 (MGP_CAROLIEiJ_G0020737) #37	Cfap91 (MGP_CAROLIEiJ_G0020738)
Shrew mouse	MODERN SPECIES	3	Parp14 (MGP_PahariEiJ_G0016409)	Dtx3l (MGP_PahariEiJ_G0016410)	MGP_PahariEiJ_G0016411 #7	Kpna1 (MGP_PahariEiJ_G0016412) #8	Wdr5b (MGP_PahariEiJ_G0016413) #9	Fam162a (MGP_PahariEiJ_G0016414) #11	Ccdc58 (MGP_PahariEiJ_G0016415) #12	MGP_PahariEiJ_G0016416	Casr (MGP_PahariEiJ_G0016417) #14	Cd86 (MGP_PahariEiJ_G0016418) #15	Ildr1 (MGP_PahariEiJ_G0016419) #16	Slc15a2 (MGP_PahariEiJ_G0016420) #17	Eaf2 (MGP_PahariEiJ_G0016421) #19	Iqcb1 (MGP_PahariEiJ_G0016422) #20	Golgb1 (MGP_PahariEiJ_G0016423) #21	Hcls1 (MGP_PahariEiJ_G0016424) #22	Fbxo40 (MGP_PahariEiJ_G0016425) #23	Polq (MGP_PahariEiJ_G0016426) #26	Stxbp5l (MGP_PahariEiJ_G0016427) #27	Gtf2e1 (MGP_PahariEiJ_G0016428) #28	Rabl3 (MGP_PahariEiJ_G0016429) #29	Hgd (MGP_PahariEiJ_G0016430) #30	Ndufb4 (MGP_PahariEiJ_G0016431) #31	Fstl1 (MGP_PahariEiJ_G0016432) #32	Btnl12 (MGP_PahariEiJ_G0016433)	Lrrc58 (MGP_PahariEiJ_G0016434) #33	Gpr156 (MGP_PahariEiJ_G0016435) #34	Gsk3b (MGP_PahariEiJ_G0016436) #36	Nr1i2 (MGP_PahariEiJ_G0016437) #37	Cfap91 (MGP_PahariEiJ_G0016438)	MGP_PahariEiJ_G0016439
Rat	MODERN SPECIES	2	Stfa2 (ENSRNOG00000064199) #13	LOC120095659 (ENSRNOG00000068561) #13	Stfa2l2 (ENSRNOG00000063669) #13	Cstdc4 (ENSRNOG00000063692)	Stfa2l1 (ENSRNOG00000033929) #13	ENSRNOG00000066258 #13	LOC689230 (ENSRNOG00000068554) #13	Stfa3 (ENSRNOG00000033933) #13	Casr (ENSRNOG00000002265) #14	Cd86 (ENSRNOG00000038835) #15	Slc15a2 (ENSRNOG00000002305) #17	Ildr1 (ENSRNOG00000002289) #16	Eaf2 (ENSRNOG00000002350) #19	Iqcb1 (ENSRNOG00000038868) #20	Golgb1 (ENSRNOG00000030314) #21	Hcls1 (ENSRNOG00000038881) #22	Fbxo40 (ENSRNOG00000002459) #23	Gng10-ps1 (ENSRNOG00000070865)	Polq (ENSRNOG00000002471) #26	Stxbp5l (ENSRNOG00000002496) #27	ENSRNOG00000068521	Gtf2e1 (ENSRNOG00000026008) #28	Rabl3 (ENSRNOG00000026085) #29	Hgd (ENSRNOG00000002701) #30	Ndufb4 (ENSRNOG00000002721) #31	LOC102552404 (ENSRNOG00000068993)	Lrrc58 (ENSRNOG00000027151) #33	ENSRNOG00000064655	Fstl1 (ENSRNOG00000002746) #32	Gpr156 (ENSRNOG00000002797) #34	Gsk3b (ENSRNOG00000002833) #36
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a.h #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.h #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a.h #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.h #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Chinese hamster chok1gshd	MODERN SPECIES	382	Parp14 (ENSCGRG00001006699)	ENSCGRG00001019002	Parp9 (ENSCGRG00001020003) #7	Kpna1 (ENSCGRG00001022843) #8	ENSCGRG00001004715	ENSCGRG00001002066 #11	Ccdc58 (ENSCGRG00001007596) #12	ENSCGRG00001013254 #13	Casr (ENSCGRG00001016487) #14	Cd86 (ENSCGRG00001021687) #15	Ildr1 (ENSCGRG00001002658) #16	Slc15a2 (ENSCGRG00001019056) #17	Eaf2 (ENSCGRG00001001162) #19	Iqcb1 (ENSCGRG00001004386) #20	Golgb1 (ENSCGRG00001012572) #21	Hcls1 (ENSCGRG00001024176) #22	Fbxo40 (ENSCGRG00001023973) #23	Polq (ENSCGRG00001013184) #26	Stxbp5l (ENSCGRG00001011397) #27	Gtf2e1 (ENSCGRG00001013030) #28	Rabl3 (ENSCGRG00001021537) #29	Hgd (ENSCGRG00001019124) #30	ENSCGRG00001016366 #31	Fstl1 (ENSCGRG00001019352) #32	Btnl12 (ENSCGRG00001009585)	Lrrc58 (ENSCGRG00001011907) #33	Gpr156 (ENSCGRG00001018982) #34	ENSCGRG00001024473	Gsk3b (ENSCGRG00001011596) #36	Nr1i2 (ENSCGRG00001015366) #37	Cfap91 (ENSCGRG00001012643)
Golden Hamster	MODERN SPECIES	645	ENSMAUG00000021258	Dtx3l (ENSMAUG00000017541)	Parp9 (ENSMAUG00000002664) #7	ENSMAUG00000020889 #8	Wdr5b (ENSMAUG00000007468) #9	Fam162a (ENSMAUG00000022254) #11	Ccdc58 (ENSMAUG00000020065) #12	ENSMAUG00000011953 #13	Casr (ENSMAUG00000007398) #14	Cd86 (ENSMAUG00000019431) #15	Ildr1 (ENSMAUG00000003496) #16	ENSMAUG00000017415 #17	Eaf2 (ENSMAUG00000019901) #19	Iqcb1 (ENSMAUG00000005080) #20	Golgb1 (ENSMAUG00000015772) #21	ENSMAUG00000014613 #22	ENSMAUG00000015080 #26	Stxbp5l (ENSMAUG00000001984) #27	Gtf2e1 (ENSMAUG00000020149) #28	Rabl3 (ENSMAUG00000013022) #29	Hgd (ENSMAUG00000016960) #30	Ndufb4 (ENSMAUG00000013448) #31	Fstl1 (ENSMAUG00000002118) #32	Btnl12 (ENSMAUG00000010510)	Lrrc58 (ENSMAUG00000014544) #33	Gpr156 (ENSMAUG00000014863) #34	Gsk3b (ENSMAUG00000015683) #36	Nr1i2 (ENSMAUG00000011479) #37	Cfap91 (ENSMAUG00000008338)	Cox17 (ENSMAUG00000020841)	ENSMAUG00000020930
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a.h #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.h #31	ENSGT00390000007133.g.b #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Northern American deer mouse	MODERN SPECIES	3	Parp14 (ENSPEMG00000008286)	Dtx3l (ENSPEMG00000009226)	Parp9 (ENSPEMG00000010239) #7	Kpna1 (ENSPEMG00000018248) #8	Wdr5b (ENSPEMG00000004447) #9	ENSPEMG00000005712 #11	Ccdc58 (ENSPEMG00000017093) #12	ENSPEMG00000003391 #13	Casr (ENSPEMG00000008816) #14	Cd86 (ENSPEMG00000001872) #15	Ildr1 (ENSPEMG00000001729) #16	Slc15a2 (ENSPEMG00000018398) #17	Eaf2 (ENSPEMG00000023833) #19	Iqcb1 (ENSPEMG00000007062) #20	Golgb1 (ENSPEMG00000023907) #21	Hcls1 (ENSPEMG00000000520) #22	Fbxo40 (ENSPEMG00000010564) #23	Polq (ENSPEMG00000017429) #26	Stxbp5l (ENSPEMG00000004327) #27	Gtf2e1 (ENSPEMG00000017575) #28	Rabl3 (ENSPEMG00000016913) #29	Hgd (ENSPEMG00000011187) #30	ENSPEMG00000017143 #31	Fstl1 (ENSPEMG00000001577) #32	Btnl12 (ENSPEMG00000018750)	ENSPEMG00000025730 #33	Gpr156 (ENSPEMG00000010041) #34	Gsk3b (ENSPEMG00000013248) #36	Nr1i2 (ENSPEMG00000011080) #37	Cfap91 (ENSPEMG00000012934)	Cox17 (ENSPEMG00000021484)
Prairie vole	MODERN SPECIES	7	Col8a1 (ENSMOCG00000012701)	Cmss1 (ENSMOCG00000021937)	Filip1l (ENSMOCG00000007107)	ENSMOCG00000013599	Tmem30c (ENSMOCG00000015756)	ENSMOCG00000001124	Tbc1d23 (ENSMOCG00000016619)	Nit2 (ENSMOCG00000018553)	Tomm70a (ENSMOCG00000021240)	ENSMOCG00000021737	Lnp1 (ENSMOCG00000013183)	ENSMOCG00000009243	Tmem45a (ENSMOCG00000010510)	Adgrg7 (ENSMOCG00000021146)	ENSMOCG00000013742	ENSMOCG00000022104 #22	Fbxo40 (ENSMOCG00000008639) #23	Polq (ENSMOCG00000016969) #26	Stxbp5l (ENSMOCG00000000855) #27	ENSMOCG00000020694 #28	Rabl3 (ENSMOCG00000015237) #29	Hgd (ENSMOCG00000002971) #30	Ndufb4 (ENSMOCG00000017175) #31	Fstl1 (ENSMOCG00000019386) #32	Btnl12 (ENSMOCG00000013857)	Lrrc58 (ENSMOCG00000021625) #33	Gpr156 (ENSMOCG00000011836) #34	Gsk3b (ENSMOCG00000003748) #36	Nr1i2 (ENSMOCG00000010007) #37	Cfap91 (ENSMOCG00000022057)	ENSMOCG00000015088
Lagomorpha	ANCESTRAL SPECIES	9	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Rabbit	MODERN SPECIES	5	KPNA1 (ENSOCUG00000002694) #8	WDR5B (ENSOCUG00000030198) #9	FAM162A (ENSOCUG00000002686) #11	ENSOCUG00000021647	MIX23 (ENSOCUG00000002682) #12	ENSOCUG00000027176	CSTA (ENSOCUG00000029025) #13	CASR (ENSOCUG00000005085) #14	CD86 (ENSOCUG00000011550) #15	ILDR1 (ENSOCUG00000011541) #16	SLC15A2 (ENSOCUG00000001853) #17	EAF2 (ENSOCUG00000007081) #19	ENSOCUG00000005913	IQCB1 (ENSOCUG00000009145) #20	GOLGB1 (ENSOCUG00000012457) #21	HCLS1 (ENSOCUG00000012449) #22	FBXO40 (ENSOCUG00000012444) #23	POLQ (ENSOCUG00000008077) #26	STXBP5L (ENSOCUG00000005835) #27	GTF2E1 (ENSOCUG00000002784) #28	HGD (ENSOCUG00000009008) #30	ENSOCUG00000029140 #31	ENSOCUG00000012731	FSTL1 (ENSOCUG00000005247) #32	ENSOCUG00000029307	LRRC58 (ENSOCUG00000025190) #33	ENSOCUG00000026225	GPR156 (ENSOCUG00000006705) #34	GSK3B (ENSOCUG00000014932) #36	NR1I2 (ENSOCUG00000006125) #37	CFAP91 (ENSOCUG00000009467)
Pika	MODERN SPECIES	4230													EAF2 (ENSOPRG00000006122) #19	IQCB1 (ENSOPRG00000006109) #20	GOLGB1 (ENSOPRG00000006091) #21	HCLS1 (ENSOPRG00000006078) #22	POLQ (ENSOPRG00000006048) #26	ENSOPRG00000006016 #27
Tree shrew	MODERN SPECIES	5562										CD86 (ENSTBEG00000011199) #15	ILDR1 (ENSTBEG00000010625) #16	SLC15A2 (ENSTBEG00000009693) #17	EAF2 (ENSTBEG00000017542) #19	IQCB1 (ENSTBEG00000017231) #20	GOLGB1 (ENSTBEG00000016367) #21	HCLS1 (ENSTBEG00000015923) #22	FBXO40 (ENSTBEG00000015825) #23	ARGFX (ENSTBEG00000015401)
Primates	ANCESTRAL SPECIES	1	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.u #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Hominidae	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.u.b #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000166143.A.a.b.a.b.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.u.b #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00940000166143.A.a.b.a.b.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.u.b #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Pan	ANCESTRAL SPECIES	2	ENSGT00940000166143.A.a.b.a.b.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.u.b #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Chimpanzee	MODERN SPECIES	16	ENSPTRG00000050279	DTX3L (ENSPTRG00000015295)	PARP9 (ENSPTRG00000015294) #7	KPNA1 (ENSPTRG00000015293) #8	WDR5B (ENSPTRG00000030152) #9	FAM162A (ENSPTRG00000015292) #11	MIX23 (ENSPTRG00000043778) #12	CSTA (ENSPTRG00000015290) #13	CASR (ENSPTRG00000015289) #14	CD86 (ENSPTRG00000015288) #15	ILDR1 (ENSPTRG00000015285) #16	SLC15A2 (ENSPTRG00000015284) #17	EAF2 (ENSPTRG00000015282) #19	IQCB1 (ENSPTRG00000015281) #20	GOLGB1 (ENSPTRG00000015280) #21	HCLS1 (ENSPTRG00000015279) #22	FBXO40 (ENSPTRG00000015278) #23	ARGFX (ENSPTRG00000015277)	ENSPTRG00000044655	POLQ (ENSPTRG00000015276) #26	STXBP5L (ENSPTRG00000015274) #27	GTF2E1 (ENSPTRG00000015273) #28	RABL3 (ENSPTRG00000015272) #29	HGD (ENSPTRG00000015271) #30	NDUFB4 (ENSPTRG00000015270) #31	FSTL1 (ENSPTRG00000015269) #32	LRRC58 (ENSPTRG00000015268) #33	GPR156 (ENSPTRG00000015267) #34	GSK3B (ENSPTRG00000015264) #36	NR1I2 (ENSPTRG00000015263) #37	CFAP91 (ENSPTRG00000015262)
Bonobo	MODERN SPECIES	16	ENSPPAG00000014687	DTX3L (ENSPPAG00000025871)	PARP9 (ENSPPAG00000043447) #7	KPNA1 (ENSPPAG00000038484) #8	WDR5B (ENSPPAG00000023737) #9	FAM162A (ENSPPAG00000029084) #11	MIX23 (ENSPPAG00000028374) #12	CSTA (ENSPPAG00000042804) #13	CASR (ENSPPAG00000036287) #14	CD86 (ENSPPAG00000033813) #15	ILDR1 (ENSPPAG00000042213) #16	SLC15A2 (ENSPPAG00000037252) #17	EAF2 (ENSPPAG00000042010) #19	IQCB1 (ENSPPAG00000020920) #20	GOLGB1 (ENSPPAG00000032862) #21	HCLS1 (ENSPPAG00000016859) #22	FBXO40 (ENSPPAG00000043031) #23	ARGFX (ENSPPAG00000029106)	POLQ (ENSPPAG00000027313) #26	STXBP5L (ENSPPAG00000036564) #27	GTF2E1 (ENSPPAG00000030846) #28	RABL3 (ENSPPAG00000036997) #29	HGD (ENSPPAG00000031410) #30	NDUFB4 (ENSPPAG00000027750) #31	FSTL1 (ENSPPAG00000029345) #32	LRRC58 (ENSPPAG00000026667) #33	GPR156 (ENSPPAG00000026940) #34	GSK3B (ENSPPAG00000040976) #36	NR1I2 (ENSPPAG00000028796) #37	CFAP91 (ENSPPAG00000028499)	ENSPPAG00000039098
Human	MODERN SPECIES	15	PARP15 (ENSG00000173200)	DTX3L (ENSG00000163840)	PARP9 (ENSG00000138496) #7	KPNA1 (ENSG00000114030) #8	WDR5B (ENSG00000196981) #9	FAM162A (ENSG00000114023) #11	MIX23 (ENSG00000160124) #12	CSTA (ENSG00000121552) #13	CASR (ENSG00000036828) #14	CD86 (ENSG00000114013) #15	ILDR1 (ENSG00000145103) #16	SLC15A2 (ENSG00000163406) #17	EAF2 (ENSG00000145088) #19	IQCB1 (ENSG00000173226) #20	GOLGB1 (ENSG00000173230) #21	HCLS1 (ENSG00000180353) #22	FBXO40 (ENSG00000163833) #23	ARGFX (ENSG00000186103)	POLQ (ENSG00000051341) #26	STXBP5L (ENSG00000145087) #27	GTF2E1 (ENSG00000153767) #28	RABL3 (ENSG00000144840) #29	HGD (ENSG00000113924) #30	NDUFB4 (ENSG00000065518) #31	FSTL1 (ENSG00000163430) #32	LRRC58 (ENSG00000163428) #33	GPR156 (ENSG00000175697) #34	GSK3B (ENSG00000082701) #36	NR1I2 (ENSG00000144852) #37	ENSG00000285585	CFAP91 (ENSG00000183833)
Gorilla	MODERN SPECIES	16	ENSGGOG00000039543	DTX3L (ENSGGOG00000015979)	PARP9 (ENSGGOG00000015971) #7	KPNA1 (ENSGGOG00000015957) #8	WDR5B (ENSGGOG00000003266) #9	FAM162A (ENSGGOG00000022758) #11	MIX23 (ENSGGOG00000001964) #12	CSTA (ENSGGOG00000024959) #13	CASR (ENSGGOG00000002159) #14	CD86 (ENSGGOG00000008578) #15	ILDR1 (ENSGGOG00000002958) #16	SLC15A2 (ENSGGOG00000011601) #17	EAF2 (ENSGGOG00000011594) #19	IQCB1 (ENSGGOG00000028124) #20	GOLGB1 (ENSGGOG00000010257) #21	HCLS1 (ENSGGOG00000016791) #22	FBXO40 (ENSGGOG00000016785) #23	ARGFX (ENSGGOG00000005362)	ENSGGOG00000038094	POLQ (ENSGGOG00000011565) #26	STXBP5L (ENSGGOG00000034916) #27	GTF2E1 (ENSGGOG00000022773) #28	RABL3 (ENSGGOG00000006059) #29	HGD (ENSGGOG00000009039) #30	NDUFB4 (ENSGGOG00000013923) #31	ENSGGOG00000036304	ENSGGOG00000002305 #32	LRRC58 (ENSGGOG00000006581) #33	GPR156 (ENSGGOG00000005597) #34	GSK3B (ENSGGOG00000007367) #36	NR1I2 (ENSGGOG00000007361) #37
Orangutan	MODERN SPECIES	16	PARP15 (ENSPPYG00000013480)	DTX3L (ENSPPYG00000013481)	PARP9 (ENSPPYG00000013482) #7	KPNA1 (ENSPPYG00000013483) #8	WDR5B (ENSPPYG00000013484) #9	FAM162A (ENSPPYG00000013485) #11	MIX23 (ENSPPYG00000013486) #12	CSTA (ENSPPYG00000013487) #13	CASR (ENSPPYG00000013489) #14	CD86 (ENSPPYG00000013490) #15	ILDR1 (ENSPPYG00000013491) #16	SLC15A2 (ENSPPYG00000013492) #17	EAF2 (ENSPPYG00000013493) #19	IQCB1 (ENSPPYG00000013494) #20	GOLGB1 (ENSPPYG00000029668) #21	HCLS1 (ENSPPYG00000013495) #22	FBXO40 (ENSPPYG00000013496) #23	ARGFX (ENSPPYG00000013497)	POLQ (ENSPPYG00000013498) #26	STXBP5L (ENSPPYG00000013499) #27	GTF2E1 (ENSPPYG00000013500) #28	RABL3 (ENSPPYG00000013501) #29	HGD (ENSPPYG00000013502) #30	NDUFB4 (ENSPPYG00000013503) #31	FSTL1 (ENSPPYG00000013504) #32	LRRC58 (ENSPPYG00000013505) #33	ENSPPYG00000037160	GPR156 (ENSPPYG00000013506) #34	GSK3B (ENSPPYG00000013507) #36	NR1I2 (ENSPPYG00000013508) #37	CFAP91 (ENSPPYG00000013509)
Gibbon	MODERN SPECIES	13	ENSNLEG00000035299	DTX3L (ENSNLEG00000034825)	PARP9 (ENSNLEG00000000303) #7	KPNA1 (ENSNLEG00000000296) #8	WDR5B (ENSNLEG00000018651) #9	FAM162A (ENSNLEG00000000293) #11	MIX23 (ENSNLEG00000000291) #12	CSTA (ENSNLEG00000000289) #13	CASR (ENSNLEG00000000284) #14	CD86 (ENSNLEG00000000277) #15	ILDR1 (ENSNLEG00000000266) #16	SLC15A2 (ENSNLEG00000000236) #17	EAF2 (ENSNLEG00000000228) #19	IQCB1 (ENSNLEG00000000202) #20	GOLGB1 (ENSNLEG00000000187) #21	HCLS1 (ENSNLEG00000000180) #22	FBXO40 (ENSNLEG00000000176) #23	ARGFX (ENSNLEG00000013255)	ENSNLEG00000015545	ENSNLEG00000032065	ENSNLEG00000011888	ROBO1 (ENSNLEG00000011861)	GBE1 (ENSNLEG00000011827)	ENSNLEG00000029461	CADM2 (ENSNLEG00000033517)	VGLL3 (ENSNLEG00000011790)	ENSNLEG00000028318	CHMP2B (ENSNLEG00000027188)	POU1F1 (ENSNLEG00000011761)	ENSNLEG00000033668	HTR1F (ENSNLEG00000018632)
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00940000153095.g.b.a.a.a.a	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00910000148071	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00940000161696.c.a.c	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36
Rhinopithecus	ANCESTRAL SPECIES	99	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00940000153095.g.b.a.a.a.a	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00910000148071	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00940000161696.c.a.c	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37
Golden snub-nosed monkey	MODERN SPECIES	1514	DTX3L (ENSRROG00000036307)	PARP9 (ENSRROG00000044224) #7	KPNA1 (ENSRROG00000019521) #8	WDR5B (ENSRROG00000013553) #9	FAM162A (ENSRROG00000032837) #11	MIX23 (ENSRROG00000045510) #12	CSTA (ENSRROG00000042404) #13	CASR (ENSRROG00000028094) #14	CD86 (ENSRROG00000028663) #15	ILDR1 (ENSRROG00000041988) #16	SLC15A2 (ENSRROG00000042924) #17	EAF2 (ENSRROG00000030183) #19	IQCB1 (ENSRROG00000036172) #20	ENSRROG00000017055	GOLGB1 (ENSRROG00000032348) #21	HCLS1 (ENSRROG00000042649) #22	FBXO40 (ENSRROG00000002095) #23	ARGFX (ENSRROG00000034121)	POLQ (ENSRROG00000045280) #26
Black snub-nosed monkey	MODERN SPECIES	116								CASR (ENSRBIG00000027082) #14	CD86 (ENSRBIG00000032849) #15	ILDR1 (ENSRBIG00000040069) #16	SLC15A2 (ENSRBIG00000027861) #17	EAF2 (ENSRBIG00000043640) #19	IQCB1 (ENSRBIG00000040113) #20	ENSRBIG00000037400	GOLGB1 (ENSRBIG00000037187) #21	HCLS1 (ENSRBIG00000015356) #22	ENSRBIG00000036098	FBXO40 (ENSRBIG00000040355) #23	ENSRBIG00000038038	POLQ (ENSRBIG00000023391) #26	STXBP5L (ENSRBIG00000040973) #27	ENSRBIG00000043061	GTF2E1 (ENSRBIG00000038747) #28	RABL3 (ENSRBIG00000040941) #29	HGD (ENSRBIG00000041495) #30	NDUFB4 (ENSRBIG00000042955) #31	FSTL1 (ENSRBIG00000035867) #32	LRRC58 (ENSRBIG00000001268) #33	ENSRBIG00000036153	GPR156 (ENSRBIG00000028090) #34	GSK3B (ENSRBIG00000036074) #36
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00940000153095.g.b.a.a.a.a	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00910000148071	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00940000161696.c.a.c	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00910000148071	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00940000161696.c.a.c	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36
Macaca	ANCESTRAL SPECIES	5	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.s #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Pig-tailed macaque	MODERN SPECIES	453	DTX3L (ENSMNEG00000038749)	PARP9 (ENSMNEG00000033549) #7	KPNA1 (ENSMNEG00000040844) #8	WDR5B (ENSMNEG00000018966) #9	FAM162A (ENSMNEG00000036945) #11	MIX23 (ENSMNEG00000041513) #12	CSTA (ENSMNEG00000035064) #13	ENSMNEG00000038539	CASR (ENSMNEG00000035840) #14	CD86 (ENSMNEG00000031802) #15	ILDR1 (ENSMNEG00000031854) #16	SLC15A2 (ENSMNEG00000033273) #17	EAF2 (ENSMNEG00000036190) #19	IQCB1 (ENSMNEG00000039511) #20	GOLGB1 (ENSMNEG00000043119) #21	HCLS1 (ENSMNEG00000041239) #22	FBXO40 (ENSMNEG00000041676) #23	ENSMNEG00000029929	ARGFX (ENSMNEG00000031585)	POLQ (ENSMNEG00000035186) #26	STXBP5L (ENSMNEG00000032136) #27	GTF2E1 (ENSMNEG00000028897) #28	RABL3 (ENSMNEG00000043980) #29	HGD (ENSMNEG00000035035) #30	NDUFB4 (ENSMNEG00000034340) #31	ENSMNEG00000009924	FSTL1 (ENSMNEG00000040132) #32	LRRC58 (ENSMNEG00000045148) #33	ENSMNEG00000037258	GPR156 (ENSMNEG00000030384) #34	GSK3B (ENSMNEG00000026988) #36
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.s #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Crab-eating macaque	MODERN SPECIES	11	ENSMFAG00000033728	PARP15 (ENSMFAG00000026206)	KPNA1 (ENSMFAG00000046020) #8	DTX3L (ENSMFAG00000031102)	PARP9 (ENSMFAG00000030796) #7	FAM162A (ENSMFAG00000031641) #11	MIX23 (ENSMFAG00000028753) #12	CSTA (ENSMFAG00000044624) #13	CASR (ENSMFAG00000039832) #14	CD86 (ENSMFAG00000001459) #15	ILDR1 (ENSMFAG00000039518) #16	SLC15A2 (ENSMFAG00000032143) #17	EAF2 (ENSMFAG00000046362) #19	IQCB1 (ENSMFAG00000025425) #20	GOLGB1 (ENSMFAG00000031026) #21	HCLS1 (ENSMFAG00000039904) #22	FBXO40 (ENSMFAG00000043265) #23	ARGFX (ENSMFAG00000002211)	POLQ (ENSMFAG00000001627) #26	STXBP5L (ENSMFAG00000002402) #27	ENSMFAG00000060129	ENSMFAG00000002539 #28	RABL3 (ENSMFAG00000031923) #29	HGD (ENSMFAG00000041993) #30	NDUFB4 (ENSMFAG00000038344) #31	FSTL1 (ENSMFAG00000036133) #32	LRRC58 (ENSMFAG00000003454) #33	GPR156 (ENSMFAG00000000407) #34	GSK3B (ENSMFAG00000002620) #36	NR1I2 (ENSMFAG00000041037) #37	CFAP91 (ENSMFAG00000024362)
Rhesus	MODERN SPECIES	11	PARP9 (ENSMMUG00000016381) #7	KPNA1 (ENSMMUG00000016379) #8	WDR5B (ENSMMUG00000016378) #9	FAM162A (ENSMMUG00000016377) #11	MIX23 (ENSMMUG00000047586) #12	CSTA (ENSMMUG00000056258) #13	CASR (ENSMMUG00000007886) #14	CD86 (ENSMMUG00000000912) #15	ILDR1 (ENSMMUG00000000911) #16	ENSMMUG00000065284	SLC15A2 (ENSMMUG00000001049) #17	EAF2 (ENSMMUG00000001048) #19	IQCB1 (ENSMMUG00000001045) #20	GOLGB1 (ENSMMUG00000013546) #21	ENSMMUG00000050100	HCLS1 (ENSMMUG00000013545) #22	FBXO40 (ENSMMUG00000013543) #23	POLQ (ENSMMUG00000007973) #26	STXBP5L (ENSMMUG00000011161) #27	ENSMMUG00000064431	GTF2E1 (ENSMMUG00000001596) #28	RABL3 (ENSMMUG00000001594) #29	HGD (ENSMMUG00000001593) #30	NDUFB4 (ENSMMUG00000001592) #31	ENSMMUG00000052213	FSTL1 (ENSMMUG00000002925) #32	LRRC58 (ENSMMUG00000000075) #33	GPR156 (ENSMMUG00000001981) #34	GSK3B (ENSMMUG00000001980) #36	NR1I2 (ENSMMUG00000001976) #37	CFAP91 (ENSMMUG00000000907)
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00910000148071	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00940000161696.c.a.c	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36
Olive baboon	MODERN SPECIES	11	ENSPANG00000033749	PARP15 (ENSPANG00000022333)	DTX3L (ENSPANG00000023613)	PARP9 (ENSPANG00000022289) #7	KPNA1 (ENSPANG00000023614) #8	WDR5B (ENSPANG00000015873) #9	FAM162A (ENSPANG00000019143) #11	MIX23 (ENSPANG00000007394) #12	CSTA (ENSPANG00000050465) #13	CASR (ENSPANG00000019728) #14	CD86 (ENSPANG00000019725) #15	ILDR1 (ENSPANG00000019975) #16	SLC15A2 (ENSPANG00000005241) #17	IQCB1 (ENSPANG00000008985) #20	GOLGB1 (ENSPANG00000019976) #21	HCLS1 (ENSPANG00000007786) #22	FBXO40 (ENSPANG00000007138) #23	POLQ (ENSPANG00000000759) #26	STXBP5L (ENSPANG00000005242) #27	ENSPANG00000025526	GTF2E1 (ENSPANG00000007012) #28	RABL3 (ENSPANG00000001339) #29	HGD (ENSPANG00000022365) #30	NDUFB4 (ENSPANG00000017762) #31	FSTL1 (ENSPANG00000011991) #32	LRRC58 (ENSPANG00000023829) #33	GPR156 (ENSPANG00000001001) #34	ENSPANG00000041383	GSK3B (ENSPANG00000006079) #36	NR1I2 (ENSPANG00000004760) #37	CFAP91 (ENSPANG00000009687)
Cercopithecinae_d	ANCESTRAL SPECIES	58	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00910000148218	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00910000148071	ENSGT00950000183204.a #23	ENSGT00730000111572.a.a	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00940000161696.c.a.c	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36
Drill	MODERN SPECIES	282	DTX3L (ENSMLEG00000028223)	PARP9 (ENSMLEG00000037849) #7	KPNA1 (ENSMLEG00000030179) #8	ENSMLEG00000025131	WDR5B (ENSMLEG00000027036) #9	FAM162A (ENSMLEG00000033101) #11	MIX23 (ENSMLEG00000035666) #12	CSTA (ENSMLEG00000032600) #13	CASR (ENSMLEG00000028566) #14	CD86 (ENSMLEG00000040063) #15	ILDR1 (ENSMLEG00000039139) #16	SLC15A2 (ENSMLEG00000013372) #17	EAF2 (ENSMLEG00000039716) #19	IQCB1 (ENSMLEG00000039855) #20	GOLGB1 (ENSMLEG00000035907) #21	HCLS1 (ENSMLEG00000029140) #22	ENSMLEG00000037001	FBXO40 (ENSMLEG00000029856) #23	ARGFX (ENSMLEG00000033782)	POLQ (ENSMLEG00000032728) #26	STXBP5L (ENSMLEG00000039302) #27	ENSMLEG00000042332	GTF2E1 (ENSMLEG00000029434) #28	RABL3 (ENSMLEG00000028177) #29	ENSMLEG00000038919	HGD (ENSMLEG00000021037) #30	NDUFB4 (ENSMLEG00000037981) #31
Sooty mangabey	MODERN SPECIES	149	DTX3L (ENSCATG00000038398)	PARP9 (ENSCATG00000033365) #7	ENSCATG00000038570	KPNA1 (ENSCATG00000039950) #8	WDR5B (ENSCATG00000002794) #9	FAM162A (ENSCATG00000032959) #11	MIX23 (ENSCATG00000033011) #12	CSTA (ENSCATG00000037381) #13	CASR (ENSCATG00000037595) #14	CD86 (ENSCATG00000033649) #15	ILDR1 (ENSCATG00000030468) #16	SLC15A2 (ENSCATG00000031629) #17	EAF2 (ENSCATG00000029521) #19	IQCB1 (ENSCATG00000029985) #20	GOLGB1 (ENSCATG00000029546) #21	HCLS1 (ENSCATG00000041184) #22	FBXO40 (ENSCATG00000029647) #23	ARGFX (ENSCATG00000026923)	ENSCATG00000037854	POLQ (ENSCATG00000014007) #26	STXBP5L (ENSCATG00000033294) #27	ENSCATG00000000823	GTF2E1 (ENSCATG00000015158) #28	RABL3 (ENSCATG00000032561) #29	ENSCATG00000037087	HGD (ENSCATG00000033112) #30	NDUFB4 (ENSCATG00000043235) #31	FSTL1 (ENSCATG00000042936) #32	LRRC58 (ENSCATG00000029315) #33	GPR156 (ENSCATG00000036077) #34	GSK3B (ENSCATG00000034546) #36
Vervet Monkey	MODERN SPECIES	14	DTX3L (ENSCSAG00000007418)	PARP9 (ENSCSAG00000007401) #7	KPNA1 (ENSCSAG00000007394) #8	WDR5B (ENSCSAG00000018716) #9	FAM162A (ENSCSAG00000007388) #11	MIX23 (ENSCSAG00000007385) #12	CSTA (ENSCSAG00000007377) #13	CASR (ENSCSAG00000007371) #14	CD86 (ENSCSAG00000007366) #15	ILDR1 (ENSCSAG00000007351) #16	SLC15A2 (ENSCSAG00000007326) #17	EAF2 (ENSCSAG00000007313) #19	IQCB1 (ENSCSAG00000007306) #20	ENSCSAG00000018717	GOLGB1 (ENSCSAG00000007292) #21	HCLS1 (ENSCSAG00000007278) #22	FBXO40 (ENSCSAG00000007268) #23	POLQ (ENSCSAG00000007239) #26	STXBP5L (ENSCSAG00000007174) #27	GTF2E1 (ENSCSAG00000007159) #28	RABL3 (ENSCSAG00000007155) #29	HGD (ENSCSAG00000007149) #30	ENSCSAG00000007142 #31	FSTL1 (ENSCSAG00000007135) #32	LRRC58 (ENSCSAG00000007132) #33	GPR156 (ENSCSAG00000007128) #34	GSK3B (ENSCSAG00000007111) #36	ENSCSAG00000007102	NR1I2 (ENSCSAG00000007092) #37	CFAP91 (ENSCSAG00000007085)	COX17 (ENSCSAG00000007074)
Platyrrhini	ANCESTRAL SPECIES	37	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Cebidae	ANCESTRAL SPECIES	35	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Marmoset	MODERN SPECIES	6	PARP15 (ENSCJAG00000007967)	DTX3L (ENSCJAG00000007986)	PARP9 (ENSCJAG00000008000) #7	KPNA1 (ENSCJAG00000008033) #8	WDR5B (ENSCJAG00000022130) #9	FAM162A (ENSCJAG00000008116) #11	ENSCJAG00000008132 #12	CSTA (ENSCJAG00000039985) #13	CASR (ENSCJAG00000008145) #14	CD86 (ENSCJAG00000008181) #15	ILDR1 (ENSCJAG00000008227) #16	SLC15A2 (ENSCJAG00000008258) #17	EAF2 (ENSCJAG00000008358) #19	IQCB1 (ENSCJAG00000008369) #20	GOLGB1 (ENSCJAG00000008408) #21	HCLS1 (ENSCJAG00000008451) #22	POLQ (ENSCJAG00000008508) #26	ARGFX (ENSCJAG00000008507)	STXBP5L (ENSCJAG00000008529) #27	ENSCJAG00000077120	GTF2E1 (ENSCJAG00000008605) #28	RABL3 (ENSCJAG00000008611) #29	HGD (ENSCJAG00000008626) #30	NDUFB4 (ENSCJAG00000008695) #31	FSTL1 (ENSCJAG00000008700) #32	ENSCJAG00000078663	LRRC58 (ENSCJAG00000008751) #33	GPR156 (ENSCJAG00000038418) #34	GSK3B (ENSCJAG00000008783) #36	NR1I2 (ENSCJAG00000008854) #37	CFAP91 (ENSCJAG00000008891)
Cebidae_a	ANCESTRAL SPECIES	99	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053.f #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572
Capuchin	MODERN SPECIES	387	DTX3L (ENSCCAG00000017964)	PARP9 (ENSCCAG00000036930) #7	KPNA1 (ENSCCAG00000034116) #8	WDR5B (ENSCCAG00000000075) #9	FAM162A (ENSCCAG00000026814) #11	MIX23 (ENSCCAG00000037781) #12	CSTA (ENSCCAG00000034510) #13	ENSCCAG00000024387	CASR (ENSCCAG00000029942) #14	CD86 (ENSCCAG00000022590) #15	ILDR1 (ENSCCAG00000034838) #16	SLC15A2 (ENSCCAG00000031646) #17	EAF2 (ENSCCAG00000037719) #19	IQCB1 (ENSCCAG00000020188) #20	GOLGB1 (ENSCCAG00000029327) #21	HCLS1 (ENSCCAG00000033158) #22	FBXO40 (ENSCCAG00000029163) #23	ARGFX (ENSCCAG00000037179)
Bolivian squirrel monkey	MODERN SPECIES	191	PARP15 (ENSSBOG00000019346)	DTX3L (ENSSBOG00000025291)	PARP9 (ENSSBOG00000024211) #7	KPNA1 (ENSSBOG00000027857) #8	WDR5B (ENSSBOG00000009156) #9	FAM162A (ENSSBOG00000033920) #11	MIX23 (ENSSBOG00000017668) #12	CSTA (ENSSBOG00000032240) #13	CASR (ENSSBOG00000034337) #14	CD86 (ENSSBOG00000021428) #15	ILDR1 (ENSSBOG00000029380) #16	SLC15A2 (ENSSBOG00000029048) #17	EAF2 (ENSSBOG00000030373) #19	IQCB1 (ENSSBOG00000024058) #20	GOLGB1 (ENSSBOG00000025470) #21	HCLS1 (ENSSBOG00000021050) #22	FBXO40 (ENSSBOG00000001222) #23	ARGFX (ENSSBOG00000033338)	POLQ (ENSSBOG00000031950) #26
Mas night monkey	MODERN SPECIES	763															GOLGB1 (ENSANAG00000022718) #21	HCLS1 (ENSANAG00000027389) #22	FBXO40 (ENSANAG00000020395) #23	ARGFX (ENSANAG00000021156)	POLQ (ENSANAG00000024407) #26	ENSANAG00000022191	ENSANAG00000024851
Tarsier	MODERN SPECIES	4679																HCLS1 (ENSTSYG00000012897) #22	FBXO40 (ENSTSYG00000036030) #23	POLQ (ENSTSYG00000009550) #26
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Mouse lemur	MODERN SPECIES		ENSMICG00000049115	KPNA1 (ENSMICG00000048988) #8	WDR5B (ENSMICG00000049311) #9	FAM162A (ENSMICG00000049452) #11	MIX23 (ENSMICG00000049469) #12	ENSMICG00000049409 #13	ENSMICG00000049550 #13	ENSMICG00000049119 #13	CASR (ENSMICG00000049579) #14	CD86 (ENSMICG00000049554) #15	ILDR1 (ENSMICG00000049269) #16	SLC15A2 (ENSMICG00000049070) #17	EAF2 (ENSMICG00000048552) #19	IQCB1 (ENSMICG00000049588) #20	GOLGB1 (ENSMICG00000048527) #21	HCLS1 (ENSMICG00000049096) #22	FBXO40 (ENSMICG00000049444) #23	POLQ (ENSMICG00000049493) #26	STXBP5L (ENSMICG00000049262) #27	ENSMICG00000049228	GTF2E1 (ENSMICG00000049416) #28	RABL3 (ENSMICG00000049288) #29	HGD (ENSMICG00000049553) #30	NDUFB4 (ENSMICG00000049509) #31	FSTL1 (ENSMICG00000049203) #32	LRRC58 (ENSMICG00000049536) #33	GPR156 (ENSMICG00000049051) #34	GSK3B (ENSMICG00000049060) #36	NR1I2 (ENSMICG00000049095) #37	CFAP91 (ENSMICG00000049028)	COX17 (ENSMICG00000049148)
Lemuriformes_a	ANCESTRAL SPECIES	9	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Greater bamboo lemur	MODERN SPECIES	1408			ENSPSMG00000005941	KPNA1 (ENSPSMG00000005929) #8	WDR5B (ENSPSMG00000005910) #9	FAM162A (ENSPSMG00000005906) #11	MIX23 (ENSPSMG00000005898) #12	CSTA (ENSPSMG00000005879) #13	CASR (ENSPSMG00000005858) #14	CD86 (ENSPSMG00000005812) #15	ILDR1 (ENSPSMG00000005754) #16	SLC15A2 (ENSPSMG00000005619) #17	EAF2 (ENSPSMG00000005569) #19	IQCB1 (ENSPSMG00000005549) #20	GOLGB1 (ENSPSMG00000005268) #21	HCLS1 (ENSPSMG00000005051) #22	FBXO40 (ENSPSMG00000004950) #23	POLQ (ENSPSMG00000004941) #26
Coquerels sifaka	MODERN SPECIES	51	PARP15 (ENSPCOG00000025615)	DTX3L (ENSPCOG00000014270)	PARP9 (ENSPCOG00000023556) #7	KPNA1 (ENSPCOG00000004538) #8	WDR5B (ENSPCOG00000003115) #9	FAM162A (ENSPCOG00000024148) #11	MIX23 (ENSPCOG00000026503) #12	ENSPCOG00000016710 #13	CASR (ENSPCOG00000016201) #14	CD86 (ENSPCOG00000021882) #15	ILDR1 (ENSPCOG00000013181) #16	SLC15A2 (ENSPCOG00000009645) #17	EAF2 (ENSPCOG00000027591) #19	IQCB1 (ENSPCOG00000024683) #20	GOLGB1 (ENSPCOG00000008937) #21	HCLS1 (ENSPCOG00000019776) #22	FBXO40 (ENSPCOG00000026519) #23	POLQ (ENSPCOG00000024680) #26	STXBP5L (ENSPCOG00000018919) #27	ENSPCOG00000025486	GTF2E1 (ENSPCOG00000026236) #28	RABL3 (ENSPCOG00000022230) #29	ENSPCOG00000018784	HGD (ENSPCOG00000028747) #30	NDUFB4 (ENSPCOG00000028746) #31	FSTL1 (ENSPCOG00000011818) #32	LRRC58 (ENSPCOG00000003421) #33	GPR156 (ENSPCOG00000025801) #34	ENSPCOG00000022587	GSK3B (ENSPCOG00000023535) #36	NR1I2 (ENSPCOG00000025084) #37
Bushbaby	MODERN SPECIES	204	ENSOGAG00000006235	ENSOGAG00000028654	PARP9 (ENSOGAG00000001801) #7	KPNA1 (ENSOGAG00000003198) #8	WDR5B (ENSOGAG00000033502) #9	FAM162A (ENSOGAG00000003194) #11	MIX23 (ENSOGAG00000003190) #12	CSTA (ENSOGAG00000032747) #13	CASR (ENSOGAG00000003188) #14	CD86 (ENSOGAG00000000801) #15	ILDR1 (ENSOGAG00000000797) #16	SLC15A2 (ENSOGAG00000000794) #17	EAF2 (ENSOGAG00000000793) #19	IQCB1 (ENSOGAG00000004271) #20	GOLGB1 (ENSOGAG00000024169) #21	HCLS1 (ENSOGAG00000005785) #22	FBXO40 (ENSOGAG00000017238) #23	ENSOGAG00000002406	POLQ (ENSOGAG00000015795) #26	STXBP5L (ENSOGAG00000015785) #27	GTF2E1 (ENSOGAG00000026188) #28	RABL3 (ENSOGAG00000005961) #29	HGD (ENSOGAG00000005957) #30	NDUFB4 (ENSOGAG00000005956) #31	FSTL1 (ENSOGAG00000004636) #32	LRRC58 (ENSOGAG00000004634) #33	GPR156 (ENSOGAG00000006028) #34	GSK3B (ENSOGAG00000006019) #36	NR1I2 (ENSOGAG00000006017) #37	CFAP91 (ENSOGAG00000005048)	COX17 (ENSOGAG00000005047)
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37
Eulipotyphla	ANCESTRAL SPECIES	79															ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27
Hedgehog	MODERN SPECIES	6838															GOLGB1 (ENSEEUG00000001192) #21	HCLS1 (ENSEEUG00000001183) #22	FBXO40 (ENSEEUG00000001173) #23
Common shrew	MODERN SPECIES	3185															GOLGB1 (ENSSARG00000002101) #21	HCLS1 (ENSSARG00000002064) #22	FBXO40 (ENSSARG00000002057) #23	ENSSARG00000002039	POLQ (ENSSARG00000001970) #26	STXBP5L (ENSSARG00000001911) #27
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Caniformia	ANCESTRAL SPECIES		ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00390000018829.f.b	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Ursidae	ANCESTRAL SPECIES	1	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00390000018829.f.b	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Giant Panda	MODERN SPECIES		ENSAMEG00000004886	DTX3L (ENSAMEG00000014401)	PARP9 (ENSAMEG00000014386) #7	ENSAMEG00000026146 #8	WDR5B (ENSAMEG00000019768) #9	FAM162A (ENSAMEG00000014316) #11	MIX23 (ENSAMEG00000014299) #12	ENSAMEG00000014297 #13	CASR (ENSAMEG00000014276) #14	CD86 (ENSAMEG00000014263) #15	ILDR1 (ENSAMEG00000014245) #16	SLC15A2 (ENSAMEG00000014194) #17	EAF2 (ENSAMEG00000014180) #19	IQCB1 (ENSAMEG00000015044) #20	GOLGB1 (ENSAMEG00000015002) #21	HCLS1 (ENSAMEG00000014955) #22	FBXO40 (ENSAMEG00000014952) #23	POLQ (ENSAMEG00000014870) #26	STXBP5L (ENSAMEG00000026792) #27	GTF2E1 (ENSAMEG00000004829) #28	RABL3 (ENSAMEG00000004809) #29	HGD (ENSAMEG00000004767) #30	NDUFB4 (ENSAMEG00000027332) #31	FSTL1 (ENSAMEG00000006917) #32	LRRC58 (ENSAMEG00000006946) #33	GPR156 (ENSAMEG00000006958) #34	GSK3B (ENSAMEG00000006975) #36	NR1I2 (ENSAMEG00000007006) #37	CFAP91 (ENSAMEG00000007087)	COX17 (ENSAMEG00000029657)	POPDC2 (ENSAMEG00000007148)
Ursus	ANCESTRAL SPECIES	44	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00390000018829.f.b	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Polar bear	MODERN SPECIES	313	ENSUMAG00000025218	DTX3L (ENSUMAG00000025219)	PARP9 (ENSUMAG00000025220) #7	KPNA1 (ENSUMAG00000025221) #8	WDR5B (ENSUMAG00000025222) #9	ENSUMAG00000025223 #11	MIX23 (ENSUMAG00000025224) #12	ENSUMAG00000025225 #13	CASR (ENSUMAG00000025226) #14	CD86 (ENSUMAG00000025229) #15	ENSUMAG00000025230	SLC15A2 (ENSUMAG00000025231) #17	EAF2 (ENSUMAG00000025232) #19	IQCB1 (ENSUMAG00000025233) #20	GOLGB1 (ENSUMAG00000025234) #21	HCLS1 (ENSUMAG00000025248) #22	FBXO40 (ENSUMAG00000025249) #23	ENSUMAG00000025250	POLQ (ENSUMAG00000025251) #26	STXBP5L (ENSUMAG00000025252) #27	GTF2E1 (ENSUMAG00000025255) #28	RABL3 (ENSUMAG00000025256) #29	HGD (ENSUMAG00000025257) #30	NDUFB4 (ENSUMAG00000025258) #31	FSTL1 (ENSUMAG00000025259) #32	LRRC58 (ENSUMAG00000025261) #33	GPR156 (ENSUMAG00000025262) #34	GSK3B (ENSUMAG00000025264) #36	NR1I2 (ENSUMAG00000025266) #37	CFAP91 (ENSUMAG00000025267)	COX17 (ENSUMAG00000025268)
Mustelinae	ANCESTRAL SPECIES	20	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b.a #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00390000018829.f.b	ENSGT00940000158694 #26
American mink	MODERN SPECIES	620															GOLGB1 (ENSNVIG00000008197) #21	HCLS1 (ENSNVIG00000008095) #22	FBXO40 (ENSNVIG00000008079) #23	ENSNVIG00000008053	POLQ (ENSNVIG00000007713) #26
Ferret	MODERN SPECIES	176	PARP15 (ENSMPUG00000004730)	DTX3L (ENSMPUG00000004741)	PARP9 (ENSMPUG00000004750) #7	KPNA1 (ENSMPUG00000004757) #8	FAM162A (ENSMPUG00000004773) #11	WDR5B (ENSMPUG00000018896) #9	MIX23 (ENSMPUG00000004777) #12	CSTA (ENSMPUG00000004783) #13	CASR (ENSMPUG00000004798) #14	CD86 (ENSMPUG00000004803) #15	ILDR1 (ENSMPUG00000004808) #16	SLC15A2 (ENSMPUG00000004818) #17	EAF2 (ENSMPUG00000004844) #19	IQCB1 (ENSMPUG00000004852) #20	GOLGB1 (ENSMPUG00000004867) #21	HCLS1 (ENSMPUG00000004886) #22	FBXO40 (ENSMPUG00000004973) #23	POLQ (ENSMPUG00000004980) #26	TRIM42 (ENSMPUG00000004993)	ENSMPUG00000018902	CLSTN2 (ENSMPUG00000004999)
Canidae	ANCESTRAL SPECIES	35	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Canis_lupus	ANCESTRAL SPECIES	31	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a.m #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Dingo	MODERN SPECIES	65	PARP15 (ENSCAFG00020005735)	DTX3L (ENSCAFG00020005740)	PARP9 (ENSCAFG00020005744) #7	KPNA1 (ENSCAFG00020005751) #8	WDR5B (ENSCAFG00020005756) #9	FAM162A (ENSCAFG00020005763) #11	MIX23 (ENSCAFG00020005773) #12	CSTA (ENSCAFG00020005785) #13	CASR (ENSCAFG00020005795) #14	CD86 (ENSCAFG00020005830) #15	ILDR1 (ENSCAFG00020005836) #16	SLC15A2 (ENSCAFG00020005845) #17	EAF2 (ENSCAFG00020005884) #19	IQCB1 (ENSCAFG00020005889) #20	GOLGB1 (ENSCAFG00020005894) #21	HCLS1 (ENSCAFG00020005905) #22	FBXO40 (ENSCAFG00020005920) #23	POLQ (ENSCAFG00020005928) #26	STXBP5L (ENSCAFG00020005993) #27	GTF2E1 (ENSCAFG00020006391) #28	RABL3 (ENSCAFG00020006397) #29	HGD (ENSCAFG00020006416) #30	NDUFB4 (ENSCAFG00020006504) #31	ENSCAFG00020006505	FSTL1 (ENSCAFG00020006511) #32	LRRC58 (ENSCAFG00020006515) #33	GPR156 (ENSCAFG00020006519) #34	GSK3B (ENSCAFG00020006540) #36	NR1I2 (ENSCAFG00020006550) #37	ENSCAFG00020006572	ENSCAFG00020006574
Dog	MODERN SPECIES	26	PARP15 (ENSCAFG00845024135)	DTX3L (ENSCAFG00845023939)	PARP9 (ENSCAFG00845023649) #7	WDR5B (ENSCAFG00845023565) #9	KPNA1 (ENSCAFG00845023382) #8	FAM162A (ENSCAFG00845023253) #11	CCDC58 (ENSCAFG00845023125) #12	CSTA (ENSCAFG00845023052) #13	CASR (ENSCAFG00845022950) #14	CD86 (ENSCAFG00845022561) #15	ILDR1 (ENSCAFG00845022373) #16	SLC15A2 (ENSCAFG00845022167) #17	EAF2 (ENSCAFG00845022054) #19	IQCB1 (ENSCAFG00845021876) #20	GOLGB1 (ENSCAFG00845021329) #21	HCLS1 (ENSCAFG00845020698) #22	FBXO40 (ENSCAFG00845020486) #23	POLQ (ENSCAFG00845020313) #26	STXBP5L (ENSCAFG00845019533) #27	GTF2E1 (ENSCAFG00845019430) #28	HGD (ENSCAFG00845018928) #30	NDUFB4 (ENSCAFG00845018723) #31	FSTL1 (ENSCAFG00845018268) #32	LRRC58 (ENSCAFG00845018072) #33	GPR156 (ENSCAFG00845017899) #34	GSK3B (ENSCAFG00845017754) #36	NR1I2 (ENSCAFG00845017664) #37	ENSCAFG00845017584	CFAP91 (ENSCAFG00845017391)	COX17 (ENSCAFG00845017310)	POPDC2 (ENSCAFG00845017206)
Red fox	MODERN SPECIES	6	DTX3L (ENSVVUG00000022529)	PARP9 (ENSVVUG00000022523) #7	KPNA1 (ENSVVUG00000022509) #8	FAM162A (ENSVVUG00000022501) #11	MIX23 (ENSVVUG00000022499) #12	CSTA (ENSVVUG00000022498) #13	CASR (ENSVVUG00000022486) #14	CD86 (ENSVVUG00000022471) #15	ILDR1 (ENSVVUG00000022466) #16	ENSVVUG00000022463	SLC15A2 (ENSVVUG00000022457) #17	ENSVVUG00000022454	EAF2 (ENSVVUG00000022448) #19	IQCB1 (ENSVVUG00000022443) #20	GOLGB1 (ENSVVUG00000022437) #21	HCLS1 (ENSVVUG00000022434) #22	ENSVVUG00000022430	FBXO40 (ENSVVUG00000022425) #23	POLQ (ENSVVUG00000022390) #26	STXBP5L (ENSVVUG00000022321) #27	GTF2E1 (ENSVVUG00000022305) #28	RABL3 (ENSVVUG00000022300) #29	ENSVVUG00000022298	HGD (ENSVVUG00000022291) #30	NDUFB4 (ENSVVUG00000022287) #31	ENSVVUG00000022285	ENSVVUG00000022282	FSTL1 (ENSVVUG00000022275) #32	LRRC58 (ENSVVUG00000022270) #33	GPR156 (ENSVVUG00000022267) #34	GSK3B (ENSVVUG00000022258) #36
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Panthera	ANCESTRAL SPECIES	17	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Panthera_a	ANCESTRAL SPECIES	21	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
leopard	MODERN SPECIES	15	DTX3L (ENSPPRG00000006373)	PARP9 (ENSPPRG00000009678) #7	KPNA1 (ENSPPRG00000010308) #8	WDR5B (ENSPPRG00000018618) #9	FAM162A (ENSPPRG00000011296) #11	MIX23 (ENSPPRG00000012735) #12	CSTA (ENSPPRG00000012891) #13	CASR (ENSPPRG00000014081) #14	ENSPPRG00000015375	CD86 (ENSPPRG00000016126) #15	ILDR1 (ENSPPRG00000019114) #16	SLC15A2 (ENSPPRG00000000860) #17	EAF2 (ENSPPRG00000001483) #19	IQCB1 (ENSPPRG00000002414) #20	GOLGB1 (ENSPPRG00000003483) #21	HCLS1 (ENSPPRG00000005291) #22	FBXO40 (ENSPPRG00000005750) #23	POLQ (ENSPPRG00000007014) #26	STXBP5L (ENSPPRG00000014151) #27	GTF2E1 (ENSPPRG00000015486) #28	RABL3 (ENSPPRG00000016325) #29	HGD (ENSPPRG00000017055) #30	ENSPPRG00000017598 #31	FSTL1 (ENSPPRG00000000812) #32	LRRC58 (ENSPPRG00000000972) #33	GPR156 (ENSPPRG00000003852) #34	GSK3B (ENSPPRG00000005066) #36	NR1I2 (ENSPPRG00000006305) #37	CFAP91 (ENSPPRG00000007429)	COX17 (ENSPPRG00000007758)	POPDC2 (ENSPPRG00000008619)
lion	MODERN SPECIES	9	DTX3L (ENSPLOG00000009845)	PARP9 (ENSPLOG00000009942) #7	KPNA1 (ENSPLOG00000010094) #8	WDR5B (ENSPLOG00000010123) #9	FAM162A (ENSPLOG00000010147) #11	MIX23 (ENSPLOG00000010210) #12	CSTA (ENSPLOG00000010302) #13	CASR (ENSPLOG00000010370) #14	ENSPLOG00000010552	CD86 (ENSPLOG00000010604) #15	ILDR1 (ENSPLOG00000010775) #16	SLC15A2 (ENSPLOG00000010963) #17	EAF2 (ENSPLOG00000011045) #19	IQCB1 (ENSPLOG00000011182) #20	GOLGB1 (ENSPLOG00000011283) #21	HCLS1 (ENSPLOG00000011526) #22	FBXO40 (ENSPLOG00000011625) #23	POLQ (ENSPLOG00000011699) #26	STXBP5L (ENSPLOG00000012229) #27	GTF2E1 (ENSPLOG00000013622) #28	RABL3 (ENSPLOG00000013672) #29	ENSPLOG00000013824	HGD (ENSPLOG00000013856) #30	ENSPLOG00000014040 #31	FSTL1 (ENSPLOG00000014135) #32	LRRC58 (ENSPLOG00000014323) #33	GPR156 (ENSPLOG00000014357) #34	GSK3B (ENSPLOG00000014540) #36	NR1I2 (ENSPLOG00000014646) #37	CFAP91 (ENSPLOG00000014979)	COX17 (ENSPLOG00000015215)
Tiger	MODERN SPECIES	584	PARP15 (ENSPTIG00000011576)	DTX3L (ENSPTIG00000012095)	PARP9 (ENSPTIG00000012502) #7	KPNA1 (ENSPTIG00000013177) #8	WDR5B (ENSPTIG00000009752) #9	FAM162A (ENSPTIG00000013653) #11	MIX23 (ENSPTIG00000013929) #12	CSTA (ENSPTIG00000014105) #13	CASR (ENSPTIG00000014260) #14	CD86 (ENSPTIG00000014681) #15	ILDR1 (ENSPTIG00000015063) #16	SLC15A2 (ENSPTIG00000015276) #17	EAF2 (ENSPTIG00000015608) #19	IQCB1 (ENSPTIG00000015820) #20	GOLGB1 (ENSPTIG00000016334) #21	HCLS1 (ENSPTIG00000016695) #22	FBXO40 (ENSPTIG00000016859) #23	POLQ (ENSPTIG00000017074) #26	STXBP5L (ENSPTIG00000017356) #27	GTF2E1 (ENSPTIG00000017960) #28	RABL3 (ENSPTIG00000018021) #29	HGD (ENSPTIG00000018099) #30	NDUFB4 (ENSPTIG00000018212) #31	FSTL1 (ENSPTIG00000018305) #32	LRRC58 (ENSPTIG00000018937) #33	GPR156 (ENSPTIG00000018960) #34	GSK3B (ENSPTIG00000019009) #36	NR1I2 (ENSPTIG00000019087) #37	CFAP91 (ENSPTIG00000019203)	COX17 (ENSPTIG00000019444)	POPDC2 (ENSPTIG00000019463)
Cat	MODERN SPECIES	240	PARP15 (ENSFCAG00000000929)	DTX3L (ENSFCAG00000000928)	PARP9 (ENSFCAG00000000557) #7	KPNA1 (ENSFCAG00000042340) #8	WDR5B (ENSFCAG00000005778) #9	FAM162A (ENSFCAG00000045838) #11	MIX23 (ENSFCAG00000025006) #12	CSTA (ENSFCAG00000008718) #13	CASR (ENSFCAG00000008717) #14	CD86 (ENSFCAG00000008716) #15	ILDR1 (ENSFCAG00000008713) #16	SLC15A2 (ENSFCAG00000008709) #17	EAF2 (ENSFCAG00000018226) #19	IQCB1 (ENSFCAG00000024558) #20	GOLGB1 (ENSFCAG00000025182) #21	HCLS1 (ENSFCAG00000015524) #22	FBXO40 (ENSFCAG00000015523) #23	POLQ (ENSFCAG00000023397) #26	STXBP5L (ENSFCAG00000015517) #27	GTF2E1 (ENSFCAG00000029289) #28	RABL3 (ENSFCAG00000031879) #29	ENSFCAG00000053064	ENSFCAG00000052566	HGD (ENSFCAG00000031534) #30	NDUFB4 (ENSFCAG00000024854) #31	FSTL1 (ENSFCAG00000029075) #32	LRRC58 (ENSFCAG00000025394) #33	GPR156 (ENSFCAG00000010273) #34	GSK3B (ENSFCAG00000040420) #36	NR1I2 (ENSFCAG00000006092) #37	CFAP91 (ENSFCAG00000006090)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.f #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717.f #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Greater horseshoe bat	MODERN SPECIES	11	PARP15 (ENSRFEG00010003726)	DTX3L (ENSRFEG00010003606)	PARP9 (ENSRFEG00010003581) #7	KPNA1 (ENSRFEG00010003555) #8	WDR5B (ENSRFEG00010003535) #9	FAM162A (ENSRFEG00010003513) #11	ENSRFEG00010003469 #12	CSTA (ENSRFEG00010003427) #13	CASR (ENSRFEG00010003395) #14	CD86 (ENSRFEG00010003352) #15	ILDR1 (ENSRFEG00010003293) #16	SLC15A2 (ENSRFEG00010003208) #17	EAF2 (ENSRFEG00010003167) #19	IQCB1 (ENSRFEG00010003132) #20	GOLGB1 (ENSRFEG00010003020) #21	HCLS1 (ENSRFEG00010002892) #22	FBXO40 (ENSRFEG00010002843) #23	POLQ (ENSRFEG00010002788) #26	STXBP5L (ENSRFEG00010002716) #27	GTF2E1 (ENSRFEG00010002637) #28	RABL3 (ENSRFEG00010002592) #29	HGD (ENSRFEG00010002548) #30	ENSRFEG00010002517 #31	FSTL1 (ENSRFEG00010002472) #32	LRRC58 (ENSRFEG00010002442) #33	GPR156 (ENSRFEG00010002420) #34	GSK3B (ENSRFEG00010002338) #36	NR1I2 (ENSRFEG00010002273) #37	CFAP91 (ENSRFEG00010002249)	ENSRFEG00010002225	POPDC2 (ENSRFEG00010002211)
Microbat	MODERN SPECIES	1021	ENSMLUG00000000507	PARP9 (ENSMLUG00000006438) #7	ENSMLUG00000007657	KPNA1 (ENSMLUG00000000950) #8	WDR5B (ENSMLUG00000000949) #9	FAM162A (ENSMLUG00000000941) #11	CSTA (ENSMLUG00000009066) #13	CASR (ENSMLUG00000009054) #14	ENSMLUG00000029244	CD86 (ENSMLUG00000015334) #15	ILDR1 (ENSMLUG00000015320) #16	SLC15A2 (ENSMLUG00000015306) #17	EAF2 (ENSMLUG00000027320) #19	IQCB1 (ENSMLUG00000015293) #20	GOLGB1 (ENSMLUG00000024533) #21	HCLS1 (ENSMLUG00000007751) #22	FBXO40 (ENSMLUG00000007745) #23	ENSMLUG00000011532	POLQ (ENSMLUG00000007687) #26	STXBP5L (ENSMLUG00000017088) #27	GTF2E1 (ENSMLUG00000008821) #28	RABL3 (ENSMLUG00000014113) #29	HGD (ENSMLUG00000014106) #30	NDUFB4 (ENSMLUG00000027951) #31	FSTL1 (ENSMLUG00000008852) #32	LRRC58 (ENSMLUG00000016088) #33	GPR156 (ENSMLUG00000009359) #34	GSK3B (ENSMLUG00000002885) #36	NR1I2 (ENSMLUG00000002877) #37	CFAP91 (ENSMLUG00000000045)	COX17 (ENSMLUG00000008085)
Megabat	MODERN SPECIES	2844															GOLGB1 (ENSPVAG00000006245) #21	HCLS1 (ENSPVAG00000006240) #22	FBXO40 (ENSPVAG00000006239) #23	ARGFX (ENSPVAG00000006237)
Equus	ANCESTRAL SPECIES	19	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00910000147904	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036.f	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Horse	MODERN SPECIES	10	PARP9 (ENSECAG00000012331) #7	ENSECAG00000053139	ENSECAG00000059947	KPNA1 (ENSECAG00000017694) #8	MIX23 (ENSECAG00000023743) #12	WDR5B (ENSECAG00000046836) #9	FAM162A (ENSECAG00000020415) #11	CSTA (ENSECAG00000024043) #13	CASR (ENSECAG00000024712) #14	CD86 (ENSECAG00000012128) #15	ILDR1 (ENSECAG00000014188) #16	SLC15A2 (ENSECAG00000017315) #17	EAF2 (ENSECAG00000015083) #19	IQCB1 (ENSECAG00000019106) #20	GOLGB1 (ENSECAG00000009513) #21	HCLS1 (ENSECAG00000015460) #22	FBXO40 (ENSECAG00000013546) #23	POLQ (ENSECAG00000014314) #26	STXBP5L (ENSECAG00000010725) #27	ENSECAG00000055088	ENSECAG00000057906	ENSECAG00000045072	GTF2E1 (ENSECAG00000020441) #28	RABL3 (ENSECAG00000023059) #29	ENSECAG00000040980	HGD (ENSECAG00000023083) #30	NDUFB4 (ENSECAG00000015610) #31	FSTL1 (ENSECAG00000017891) #32	ENSECAG00000028122	LRRC58 (ENSECAG00000000010) #33	GPR156 (ENSECAG00000024669) #34
Donkey	MODERN SPECIES	25	ENSEASG00005032663	ENSEASG00005026341	DTX3L (ENSEASG00005016541)	PARP9 (ENSEASG00005016538) #7	KPNA1 (ENSEASG00005015533) #8	MIX23 (ENSEASG00005015468) #12	FAM162A (ENSEASG00005015469) #11	CSTA (ENSEASG00005031611) #13	CASR (ENSEASG00005015466) #14	CD86 (ENSEASG00005015465) #15	ILDR1 (ENSEASG00005015464) #16	SLC15A2 (ENSEASG00005015215) #17	EAF2 (ENSEASG00005015156) #19	IQCB1 (ENSEASG00005015142) #20	ENSEASG00005029374 #21	HCLS1 (ENSEASG00005014348) #22	FBXO40 (ENSEASG00005014328) #23	POLQ (ENSEASG00005014326) #26	STXBP5L (ENSEASG00005012678) #27	GTF2E1 (ENSEASG00005012545) #28	RABL3 (ENSEASG00005012543) #29	ENSEASG00005037141	HGD (ENSEASG00005012531) #30	NDUFB4 (ENSEASG00005033589) #31	FSTL1 (ENSEASG00005012526) #32	LRRC58 (ENSEASG00005028750) #33	GPR156 (ENSEASG00005012520) #34	GSK3B (ENSEASG00005012514) #36	NR1I2 (ENSEASG00005012507) #37	CFAP91 (ENSEASG00005012500)	COX17 (ENSEASG00005038393)
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000154399.a.b	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT01010000228776	ENSGT00940000161118 #37	ENSGT00390000003024
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000154399.a.b	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT01010000228776	ENSGT00940000161118 #37	ENSGT00390000003024
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00390000012138.a.a.j	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.q #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT01010000228776	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00390000012138.a.a.j	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.q #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT01010000228776	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000012138.a.a.j	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696.q #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT01010000228776	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Narwhal	MODERN SPECIES	297	ENSMMNG00015005518	DTX3L (ENSMMNG00015005502)	PARP9 (ENSMMNG00015005477) #7	KPNA1 (ENSMMNG00015005449) #8	WDR5B (ENSMMNG00015005437) #9	FAM162A (ENSMMNG00015005417) #11	MIX23 (ENSMMNG00015005386) #12	CSTA (ENSMMNG00015005369) #13	CASR (ENSMMNG00015005362) #14	CD86 (ENSMMNG00015005321) #15	ILDR1 (ENSMMNG00015005290) #16	SLC15A2 (ENSMMNG00015005192) #17	EAF2 (ENSMMNG00015005168) #19	IQCB1 (ENSMMNG00015005149) #20	GOLGB1 (ENSMMNG00015005080) #21	HCLS1 (ENSMMNG00015005036) #22	FBXO40 (ENSMMNG00015005024) #23	POLQ (ENSMMNG00015004975) #26	STXBP5L (ENSMMNG00015004874) #27	GTF2E1 (ENSMMNG00015004841) #28	RABL3 (ENSMMNG00015004833) #29	HGD (ENSMMNG00015004827) #30	ENSMMNG00015004823 #31	ENSMMNG00015004821	FSTL1 (ENSMMNG00015004817) #32	LRRC58 (ENSMMNG00015004813) #33	GPR156 (ENSMMNG00015011308) #34	ENSMMNG00015011288	ENSMMNG00015011274	ENSMMNG00015011267	GSK3B (ENSMMNG00015011227) #36
Beluga whale	MODERN SPECIES	111	ENSDLEG00000010816	DTX3L (ENSDLEG00000010794)	PARP9 (ENSDLEG00000010772) #7	KPNA1 (ENSDLEG00000010738) #8	WDR5B (ENSDLEG00000010730) #9	FAM162A (ENSDLEG00000010716) #11	CCDC58 (ENSDLEG00000010690) #12	CSTA (ENSDLEG00000010674) #13	CASR (ENSDLEG00000010648) #14	CD86 (ENSDLEG00000010604) #15	ILDR1 (ENSDLEG00000010557) #16	SLC15A2 (ENSDLEG00000010488) #17	EAF2 (ENSDLEG00000010464) #19	IQCB1 (ENSDLEG00000010437) #20	GOLGB1 (ENSDLEG00000010229) #21	HCLS1 (ENSDLEG00000010160) #22	FBXO40 (ENSDLEG00000010124) #23	POLQ (ENSDLEG00000009816) #26	STXBP5L (ENSDLEG00000009518) #27	GTF2E1 (ENSDLEG00000009415) #28	RABL3 (ENSDLEG00000009391) #29	HGD (ENSDLEG00000009358) #30	ENSDLEG00000009345 #31	FSTL1 (ENSDLEG00000009282) #32	LRRC58 (ENSDLEG00000009270) #33	GPR156 (ENSDLEG00000009225) #34	ENSDLEG00000009196	ENSDLEG00000009189	ENSDLEG00000009167	GSK3B (ENSDLEG00000009106) #36	ENSDLEG00000009059 #37
Vaquita	MODERN SPECIES	15	ENSPSNG00000008285	DTX3L (ENSPSNG00000008319)	PARP9 (ENSPSNG00000008365) #7	KPNA1 (ENSPSNG00000008414) #8	ENSPSNG00000008472 #11	WDR5B (ENSPSNG00000008522) #9	MIX23 (ENSPSNG00000008563) #12	CSTA (ENSPSNG00000008625) #13	CASR (ENSPSNG00000008682) #14	CD86 (ENSPSNG00000008792) #15	ILDR1 (ENSPSNG00000008974) #16	SLC15A2 (ENSPSNG00000009269) #17	EAF2 (ENSPSNG00000009409) #19	IQCB1 (ENSPSNG00000009466) #20	GOLGB1 (ENSPSNG00000009542) #21	HCLS1 (ENSPSNG00000009720) #22	FBXO40 (ENSPSNG00000010016) #23	POLQ (ENSPSNG00000010089) #26	STXBP5L (ENSPSNG00000010549) #27	ENSPSNG00000011986 #28	RABL3 (ENSPSNG00000012142) #29	HGD (ENSPSNG00000012244) #30	ENSPSNG00000012398 #31	FSTL1 (ENSPSNG00000012493) #32	LRRC58 (ENSPSNG00000012569) #33	GPR156 (ENSPSNG00000012616) #34	GSK3B (ENSPSNG00000012811) #36	ENSPSNG00000012868	ENSPSNG00000012914 #37	CFAP91 (ENSPSNG00000013123)	POPDC2 (ENSPSNG00000013229)
Dolphin	MODERN SPECIES	1476										CD86 (ENSTTRG00000011520) #15	ILDR1 (ENSTTRG00000011519) #16	SLC15A2 (ENSTTRG00000011518) #17	EAF2 (ENSTTRG00000011517) #19	IQCB1 (ENSTTRG00000011516) #20	GOLGB1 (ENSTTRG00000011515) #21	HCLS1 (ENSTTRG00000011514) #22	FBXO40 (ENSTTRG00000011513) #23
Sperm whale	MODERN SPECIES		DTX3L (ENSPCTG00005007151)	PARP9 (ENSPCTG00005007217) #7	KPNA1 (ENSPCTG00005007272) #8	WDR5B (ENSPCTG00005007311) #9	FAM162A (ENSPCTG00005007327) #11	CCDC58 (ENSPCTG00005007365) #12	CSTA (ENSPCTG00005007431) #13	ENSPCTG00005007464	CASR (ENSPCTG00005007486) #14	CD86 (ENSPCTG00005007594) #15	ILDR1 (ENSPCTG00005007804) #16	SLC15A2 (ENSPCTG00005007982) #17	EAF2 (ENSPCTG00005008161) #19	IQCB1 (ENSPCTG00005008178) #20	GOLGB1 (ENSPCTG00005008303) #21	HCLS1 (ENSPCTG00005008835) #22	FBXO40 (ENSPCTG00005009108) #23	POLQ (ENSPCTG00005009193) #26	STXBP5L (ENSPCTG00005009787) #27	GTF2E1 (ENSPCTG00005011398) #28	RABL3 (ENSPCTG00005011446) #29	HGD (ENSPCTG00005011479) #30	NDUFB4 (ENSPCTG00005011638) #31	FSTL1 (ENSPCTG00005000217) #32	LRRC58 (ENSPCTG00005000235) #33	ENSPCTG00005000246	GPR156 (ENSPCTG00005000273) #34	GSK3B (ENSPCTG00005000333) #36	ENSPCTG00005000356	ENSPCTG00005000375	NR1I2 (ENSPCTG00005000415) #37
Blue whale	MODERN SPECIES	15	ENSBMSG00010005761	DTX3L (ENSBMSG00010005778)	PARP9 (ENSBMSG00010005809) #7	KPNA1 (ENSBMSG00010005822) #8	WDR5B (ENSBMSG00010005836) #9	FAM162A (ENSBMSG00010005850) #11	MIX23 (ENSBMSG00010005871) #12	CSTA (ENSBMSG00010005884) #13	CASR (ENSBMSG00010005910) #14	CD86 (ENSBMSG00010005973) #15	ILDR1 (ENSBMSG00010006089) #16	SLC15A2 (ENSBMSG00010006152) #17	EAF2 (ENSBMSG00010006200) #19	IQCB1 (ENSBMSG00010006219) #20	GOLGB1 (ENSBMSG00010006250) #21	HCLS1 (ENSBMSG00010006290) #22	FBXO40 (ENSBMSG00010006320) #23	ENSBMSG00010006331 #26	STXBP5L (ENSBMSG00010006447) #27	GTF2E1 (ENSBMSG00010006848) #28	RABL3 (ENSBMSG00010000075) #29	HGD (ENSBMSG00010000092) #30	ENSBMSG00010000116 #31	ENSBMSG00010000135	ENSBMSG00010000140	FSTL1 (ENSBMSG00010000173) #32	LRRC58 (ENSBMSG00010000218) #33	ENSBMSG00010000228	GPR156 (ENSBMSG00010000240) #34	GSK3B (ENSBMSG00010000277) #36	ENSBMSG00010000330
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Percora_a	ANCESTRAL SPECIES	7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00990000210901	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Bovidae	ANCESTRAL SPECIES	9	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00990000210901	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329
Caprinae	ANCESTRAL SPECIES	8	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00990000210901	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329.t	ENSGT00390000002563.b.a.b
Rambouillet Sheep	MODERN SPECIES		WDR5B (ENSOARG00020009162) #9	ENSOARG00020009132	FAM162A (ENSOARG00020009080) #11	MIX23 (ENSOARG00020008933) #12	CSTA (ENSOARG00020008867) #13	ENSOARG00020008856	CASR (ENSOARG00020008720) #14	CD86 (ENSOARG00020008439) #15	ILDR1 (ENSOARG00020008051) #16	ENSOARG00020004743 #17	ENSOARG00020004306 #17	EAF2 (ENSOARG00020004257) #19	ENSOARG00020004222	IQCB1 (ENSOARG00020004195) #20	GOLGB1 (ENSOARG00020004009) #21	HCLS1 (ENSOARG00020003906) #22	FBXO40 (ENSOARG00020003874) #23	ENSOARG00020003858	POLQ (ENSOARG00020003708) #26	STXBP5L (ENSOARG00020002489) #27	GTF2E1 (ENSOARG00020002411) #28	RABL3 (ENSOARG00020002395) #29	HGD (ENSOARG00020002382) #30	NDUFB4 (ENSOARG00020002367) #31	FSTL1 (ENSOARG00020002313) #32	LRRC58 (ENSOARG00020002291) #33	GSK3B (ENSOARG00020002145) #36	NR1I2 (ENSOARG00020002112) #37	MAATS1 (ENSOARG00020002045)	ENSOARG00020002013	POPDC2 (ENSOARG00020001991)
Goat	MODERN SPECIES		PARP9 (ENSCHIG00000016137) #7	KPNA1 (ENSCHIG00000026483) #8	WDR5B (ENSCHIG00000015357) #9	FAM162A (ENSCHIG00000024927) #11	MIX23 (ENSCHIG00000010750) #12	CSTA (ENSCHIG00000017256) #13	CASR (ENSCHIG00000026972) #14	CD86 (ENSCHIG00000016051) #15	ILDR1 (ENSCHIG00000011737) #16	ENSCHIG00000015326 #17	ENSCHIG00000016787 #17	EAF2 (ENSCHIG00000026173) #19	ENSCHIG00000012844	IQCB1 (ENSCHIG00000020033) #20	ENSCHIG00000027245 #21	HCLS1 (ENSCHIG00000026512) #22	FBXO40 (ENSCHIG00000015913) #23	POLQ (ENSCHIG00000013841) #26	STXBP5L (ENSCHIG00000021826) #27	GTF2E1 (ENSCHIG00000010996) #28	RABL3 (ENSCHIG00000017365) #29	HGD (ENSCHIG00000026560) #30	NDUFB4 (ENSCHIG00000014038) #31	FSTL1 (ENSCHIG00000019503) #32	LRRC58 (ENSCHIG00000025792) #33	GPR156 (ENSCHIG00000021430) #34	GSK3B (ENSCHIG00000014577) #36	NR1I2 (ENSCHIG00000011418) #37	CFAP91 (ENSCHIG00000019072)	COX17 (ENSCHIG00000026140)	POPDC2 (ENSCHIG00000014963)
Bovinae	ANCESTRAL SPECIES	6	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.ib.a.a #31	ENSGT00960000190801	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00960000192753
Bos	ANCESTRAL SPECIES	7	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT01020000230819	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.ib.a.a #31	ENSGT00960000190801	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00960000192753
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000164270.a.b	ENSGT01020000230819	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.ib.a.a #31	ENSGT00960000190801	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Wild yak	MODERN SPECIES	775													EAF2 (ENSBMUG00000004560) #19	IQCB1 (ENSBMUG00000004605) #20	GOLGB1 (ENSBMUG00000004808) #21	HCLS1 (ENSBMUG00000004975) #22	FBXO40 (ENSBMUG00000004998) #23	POLQ (ENSBMUG00000005052) #26	STXBP5L (ENSBMUG00000005409) #27
Domestic yak	MODERN SPECIES		KPNA1 (ENSBGRG00000007217) #8	WDR5B (ENSBGRG00000007190) #9	ENSBGRG00000007133	ENSBGRG00000005048	FAM162A (ENSBGRG00000005022) #11	MIX23 (ENSBGRG00000004919) #12	ENSBGRG00000004879 #13	ENSBGRG00000004863	CASR (ENSBGRG00000004818) #14	CD86 (ENSBGRG00000004781) #15	ILDR1 (ENSBGRG00000004730) #16	SLC15A2 (ENSBGRG00000004479) #17	EAF2 (ENSBGRG00000004433) #19	IQCB1 (ENSBGRG00000004390) #20	GOLGB1 (ENSBGRG00000003446) #21	HCLS1 (ENSBGRG00000003280) #22	FBXO40 (ENSBGRG00000003263) #23	ENSBGRG00000003256	POLQ (ENSBGRG00000002979) #26	STXBP5L (ENSBGRG00000002895) #27	GTF2E1 (ENSBGRG00000002850) #28	RABL3 (ENSBGRG00000002799) #29	HGD (ENSBGRG00000002735) #30	ENSBGRG00000002707 #31	ENSBGRG00000002696	FSTL1 (ENSBGRG00000002621) #32	LRRC58 (ENSBGRG00000002589) #33	GPR156 (ENSBGRG00000002541) #34	GSK3B (ENSBGRG00000002466) #36	NR1I2 (ENSBGRG00000002432) #37	CFAP91 (ENSBGRG00000002380)
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT01020000230819	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507.d #17	ENSGT00940000156507.c #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133.ib.a.a #31	ENSGT00960000190801	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00960000192753	ENSGT00390000003024
Cow	MODERN SPECIES		PARP9 (ENSBTAG00000021791) #7	KPNA1 (ENSBTAG00000011143) #8	WDR5B (ENSBTAG00000054326) #9	FAM162A (ENSBTAG00000011140) #11	MIX23 (ENSBTAG00000054520) #12	CSTA (ENSBTAG00000010688) #13	ENSBTAG00000014133	CASR (ENSBTAG00000003865) #14	CD86 (ENSBTAG00000013118) #15	ILDR1 (ENSBTAG00000004705) #16	ENSBTAG00000001442 #17	ENSBTAG00000033166 #17	EAF2 (ENSBTAG00000013070) #19	IQCB1 (ENSBTAG00000013069) #20	GOLGB1 (ENSBTAG00000008862) #21	HCLS1 (ENSBTAG00000001009) #22	FBXO40 (ENSBTAG00000014508) #23	POLQ (ENSBTAG00000001920) #26	STXBP5L (ENSBTAG00000001918) #27	GTF2E1 (ENSBTAG00000016848) #28	RABL3 (ENSBTAG00000015898) #29	HGD (ENSBTAG00000015895) #30	NDUFB4 (ENSBTAG00000015892) #31	ENSBTAG00000048370	FSTL1 (ENSBTAG00000022155) #32	LRRC58 (ENSBTAG00000033170) #33	GPR156 (ENSBTAG00000001464) #34	GSK3B (ENSBTAG00000048057) #36	NR1I2 (ENSBTAG00000019557) #37	ENSBTAG00000053648	CFAP91 (ENSBTAG00000001293)
Hybrid Bos Indicus	MODERN SPECIES		WDR5B (ENSBIXG00005006775) #9	FAM162A (ENSBIXG00005010576) #11	MIX23 (ENSBIXG00005010630) #12	CSTA (ENSBIXG00005010645) #13	ENSBIXG00005010673	CASR (ENSBIXG00005010724) #14	ENSBIXG00005010732	CD86 (ENSBIXG00005010771) #15	ILDR1 (ENSBIXG00005010834) #16	ENSBIXG00005010860	ENSBIXG00005001005 #17	ENSBIXG00005006204	EAF2 (ENSBIXG00005011098) #19	IQCB1 (ENSBIXG00005000543) #20	GOLGB1 (ENSBIXG00005011387) #21	HCLS1 (ENSBIXG00005011592) #22	FBXO40 (ENSBIXG00005006109) #23	POLQ (ENSBIXG00005011744) #26	STXBP5L (ENSBIXG00005011853) #27	GTF2E1 (ENSBIXG00005011917) #28	RABL3 (ENSBIXG00005011954) #29	HGD (ENSBIXG00005007473) #30	ENSBIXG00005011993 #31	FSTL1 (ENSBIXG00005012192) #32	LRRC58 (ENSBIXG00005012232) #33	GPR156 (ENSBIXG00005012249) #34	ENSBIXG00005012259	GSK3B (ENSBIXG00005005384) #36	NR1I2 (ENSBIXG00005005385) #37	ENSBIXG00005000372	ENSBIXG00005012326
American bison	MODERN SPECIES	3132													EAF2 (ENSBBBG00000015210) #19	IQCB1 (ENSBBBG00000015247) #20	GOLGB1 (ENSBBBG00000001400) #21	HCLS1 (ENSBBBG00000001352) #22	FBXO40 (ENSBBBG00000001339) #23	POLQ (ENSBBBG00000001292) #26	STXBP5L (ENSBBBG00000015534) #27	GTF2E1 (ENSBBBG00000015570) #28	RABL3 (ENSBBBG00000000791) #29	HGD (ENSBBBG00000003893) #30	ENSBBBG00000015609 #31	ENSBBBG00000015613	FSTL1 (ENSBBBG00000003439) #32	LRRC58 (ENSBBBG00000015618) #33	GPR156 (ENSBBBG00000003904) #34	GSK3B (ENSBBBG00000003911) #36	NR1I2 (ENSBBBG00000015694) #37	ENSBBBG00000002645	ENSBBBG00000015706
Siberian musk deer	MODERN SPECIES	138	FAM162A (ENSMMSG00000015960) #11	MIX23 (ENSMMSG00000015851) #12	CSTA (ENSMMSG00000015826) #13	ENSMMSG00000015816	CASR (ENSMMSG00000015755) #14	CD86 (ENSMMSG00000015699) #15	ILDR1 (ENSMMSG00000015655) #16	ENSMMSG00000015475 #17	ENSMMSG00000015451	ENSMMSG00000015437	ENSMMSG00000015419	ENSMMSG00000015360 #17	EAF2 (ENSMMSG00000015318) #19	IQCB1 (ENSMMSG00000015271) #20	GOLGB1 (ENSMMSG00000015000) #21	HCLS1 (ENSMMSG00000014862) #22	FBXO40 (ENSMMSG00000014845) #23	POLQ (ENSMMSG00000014775) #26	STXBP5L (ENSMMSG00000013838) #27	GTF2E1 (ENSMMSG00000013738) #28	RABL3 (ENSMMSG00000013700) #29	HGD (ENSMMSG00000013668) #30	NDUFB4 (ENSMMSG00000013638) #31	FSTL1 (ENSMMSG00000013565) #32	LRRC58 (ENSMMSG00000013548) #33	GPR156 (ENSMMSG00000013492) #34	GSK3B (ENSMMSG00000013438) #36	NR1I2 (ENSMMSG00000013379) #37	CFAP91 (ENSMMSG00000013329)	COX17 (ENSMMSG00000013312)	POPDC2 (ENSMMSG00000013284)
Yarkand deer	MODERN SPECIES	10	DTX3L (ENSCHYG00000008340)	PARP9 (ENSCHYG00000008198) #7	KPNA1 (ENSCHYG00000008125) #8	WDR5B (ENSCHYG00000008111) #9	FAM162A (ENSCHYG00000008033) #11	MIX23 (ENSCHYG00000007933) #12	CSTA (ENSCHYG00000007882) #13	CASR (ENSCHYG00000007820) #14	CD86 (ENSCHYG00000007758) #15	ILDR1 (ENSCHYG00000007677) #16	SLC15A2 (ENSCHYG00000007501) #17	EAF2 (ENSCHYG00000007440) #19	ENSCHYG00000007418	IQCB1 (ENSCHYG00000007370) #20	GOLGB1 (ENSCHYG00000007048) #21	HCLS1 (ENSCHYG00000006945) #22	FBXO40 (ENSCHYG00000006909) #23	ENSCHYG00000006896	POLQ (ENSCHYG00000006699) #26	STXBP5L (ENSCHYG00000006523) #27	ENSCHYG00000006478	GTF2E1 (ENSCHYG00000006448) #28	RABL3 (ENSCHYG00000006369) #29	HGD (ENSCHYG00000006320) #30	NDUFB4 (ENSCHYG00000006263) #31	FSTL1 (ENSCHYG00000006072) #32	LRRC58 (ENSCHYG00000006018) #33	GPR156 (ENSCHYG00000005936) #34	GSK3B (ENSCHYG00000005810) #36	NR1I2 (ENSCHYG00000005717) #37	CFAP91 (ENSCHYG00000005544)
Camelidae	ANCESTRAL SPECIES		ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Arabian camel	MODERN SPECIES		DTX3L (ENSCDRG00005006821)	PARP9 (ENSCDRG00005006932) #7	KPNA1 (ENSCDRG00005006961) #8	WDR5B (ENSCDRG00005007033) #9	FAM162A (ENSCDRG00005007051) #11	MIX23 (ENSCDRG00005007105) #12	CSTA (ENSCDRG00005007175) #13	ENSCDRG00005007199	CASR (ENSCDRG00005007236) #14	CD86 (ENSCDRG00005007380) #15	ILDR1 (ENSCDRG00005007584) #16	SLC15A2 (ENSCDRG00005007797) #17	EAF2 (ENSCDRG00005007901) #19	IQCB1 (ENSCDRG00005008000) #20	GOLGB1 (ENSCDRG00005008124) #21	HCLS1 (ENSCDRG00005008645) #22	FBXO40 (ENSCDRG00005008889) #23	POLQ (ENSCDRG00005009042) #26	STXBP5L (ENSCDRG00005009380) #27	GTF2E1 (ENSCDRG00005009907) #28	RABL3 (ENSCDRG00005009963) #29	HGD (ENSCDRG00005010063) #30	NDUFB4 (ENSCDRG00005010214) #31	FSTL1 (ENSCDRG00005010316) #32	LRRC58 (ENSCDRG00005010565) #33	GPR156 (ENSCDRG00005010598) #34	GSK3B (ENSCDRG00005010672) #36	NR1I2 (ENSCDRG00005010792) #37	CFAP91 (ENSCDRG00005011002)	COX17 (ENSCDRG00005011051)	POPDC2 (ENSCDRG00005011064)
Alpaca	MODERN SPECIES	2934												SLC15A2 (ENSVPAG00000003786) #17	EAF2 (ENSVPAG00000003785) #19	IQCB1 (ENSVPAG00000003784) #20	GOLGB1 (ENSVPAG00000003783) #21	ENSVPAG00000003782 #22	FBXO40 (ENSVPAG00000003781) #23	ENSVPAG00000003780	POLQ (ENSVPAG00000003779) #26	STXBP5L (ENSVPAG00000003778) #27	GTF2E1 (ENSVPAG00000003777) #28	RABL3 (ENSVPAG00000003776) #29	HGD (ENSVPAG00000003775) #30	NDUFB4 (ENSVPAG00000003774) #31	FSTL1 (ENSVPAG00000003772) #32	LRRC58 (ENSVPAG00000003771) #33	GPR156 (ENSVPAG00000003770) #34	GSK3B (ENSVPAG00000003769) #36	CFAP91 (ENSVPAG00000003768)	COX17 (ENSVPAG00000003767)	POPDC2 (ENSVPAG00000003766)
Suina	ANCESTRAL SPECIES	1	ENSGT00940000163672	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b
Pig	MODERN SPECIES	4	KPNA1 (ENSSSCG00000028475) #8	WDR5B (ENSSSCG00000053171) #9	FAM162A (ENSSSCG00000026990) #11	MIX23 (ENSSSCG00000025107) #12	ENSSSCG00000053320 #13	ENSSSCG00000028871 #13	ENSSSCG00000037882	ENSSSCG00000029661	CASR (ENSSSCG00000011878) #14	CD86 (ENSSSCG00000011877) #15	ILDR1 (ENSSSCG00000025436) #16	SLC15A2 (ENSSSCG00000030305) #17	EAF2 (ENSSSCG00000011880) #19	IQCB1 (ENSSSCG00000011881) #20	GOLGB1 (ENSSSCG00000011882) #21	HCLS1 (ENSSSCG00000011884) #22	FBXO40 (ENSSSCG00000011885) #23	ENSSSCG00000035362	POLQ (ENSSSCG00000036613) #26	STXBP5L (ENSSSCG00000039888) #27	ENSSSCG00000055930	GTF2E1 (ENSSSCG00000063377) #28	RABL3 (ENSSSCG00000035258) #29	HGD (ENSSSCG00000021227) #30	NDUFB4 (ENSSSCG00000031913) #31	FSTL1 (ENSSSCG00000039426) #32	LRRC58 (ENSSSCG00000034616) #33	ENSSSCG00000059521	GPR156 (ENSSSCG00000011888) #34	GSK3B (ENSSSCG00000011889) #36	NR1I2 (ENSSSCG00000011890) #37
Chacoan peccary	MODERN SPECIES	944	ENSCWAG00000021574	DTX3L (ENSCWAG00000021586)	PARP9 (ENSCWAG00000021593) #7	KPNA1 (ENSCWAG00000021602) #8	WDR5B (ENSCWAG00000021606) #9	FAM162A (ENSCWAG00000021610) #11	MIX23 (ENSCWAG00000021615) #12	ENSCWAG00000021622 #13	CASR (ENSCWAG00000021630) #14	CD86 (ENSCWAG00000021646) #15	ILDR1 (ENSCWAG00000021661) #16	SLC15A2 (ENSCWAG00000021676) #17	EAF2 (ENSCWAG00000021684) #19	IQCB1 (ENSCWAG00000021689) #20	GOLGB1 (ENSCWAG00000021695) #21	ENSCWAG00000021699 #22	FBXO40 (ENSCWAG00000021700) #23	POLQ (ENSCWAG00000021704) #26	ENSCWAG00000021711	STXBP5L (ENSCWAG00000011896) #27	GTF2E1 (ENSCWAG00000014156) #28	RABL3 (ENSCWAG00000014195) #29	HGD (ENSCWAG00000014292) #30	NDUFB4 (ENSCWAG00000014423) #31	FSTL1 (ENSCWAG00000014472) #32	LRRC58 (ENSCWAG00000014577) #33	GPR156 (ENSCWAG00000014620) #34	GSK3B (ENSCWAG00000014772) #36	NR1I2 (ENSCWAG00000014829) #37	CFAP91 (ENSCWAG00000014977)	COX17 (ENSCWAG00000015015)
Atlantogenata	ANCESTRAL SPECIES	19	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Afrotheria	ANCESTRAL SPECIES	17	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Afrotheria_a	ANCESTRAL SPECIES	16	ENSGT00940000154311.a.b	ENSGT00940000154578.A.d	ENSGT00940000158837 #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000154143.f #9	ENSGT00640000091497.a #11	ENSGT00390000011053 #12	ENSGT00940000155717 #13	ENSGT00940000157596 #14	ENSGT00940000161500 #15	ENSGT00950000183058.A.b #16	ENSGT00940000156507 #17	ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Elephant	MODERN SPECIES	261	ENSLAFG00000028871	ENSLAFG00000017413	PARP9 (ENSLAFG00000017406) #7	KPNA1 (ENSLAFG00000002804) #8	WDR5B (ENSLAFG00000016063) #9	FAM162A (ENSLAFG00000016057) #11	MIX23 (ENSLAFG00000016049) #12	CSTA (ENSLAFG00000016046) #13	CASR (ENSLAFG00000007493) #14	ENSLAFG00000010871 #15	ILDR1 (ENSLAFG00000015278) #16	SLC15A2 (ENSLAFG00000015265) #17	EAF2 (ENSLAFG00000014878) #19	IQCB1 (ENSLAFG00000014875) #20	GOLGB1 (ENSLAFG00000014857) #21	HCLS1 (ENSLAFG00000014847) #22	FBXO40 (ENSLAFG00000008444) #23	ARGFX (ENSLAFG00000027648)	POLQ (ENSLAFG00000011574) #26	ENSLAFG00000028209	STXBP5L (ENSLAFG00000005764) #27	GTF2E1 (ENSLAFG00000009912) #28	RABL3 (ENSLAFG00000003711) #29	HGD (ENSLAFG00000003707) #30	NDUFB4 (ENSLAFG00000021459) #31	FSTL1 (ENSLAFG00000017756) #32	ENSLAFG00000031210	LRRC58 (ENSLAFG00000017752) #33	GPR156 (ENSLAFG00000013634) #34	GSK3B (ENSLAFG00000007833) #36	NR1I2 (ENSLAFG00000007829) #37
Hyrax	MODERN SPECIES	4674															GOLGB1 (ENSPCAG00000005295) #21	HCLS1 (ENSPCAG00000005184) #22	FBXO40 (ENSPCAG00000005148) #23
Tenrec	MODERN SPECIES	7182																HCLS1 (ENSETEG00000000660) #22
Xenarthra	ANCESTRAL SPECIES	49													ENSGT00390000017724.a.b #19	ENSGT00390000002188 #20	ENSGT00730000111007.a.a #21	ENSGT00940000158997 #22	ENSGT00950000183204.a #23	ENSGT00730000111572	ENSGT00940000158694 #26	ENSGT00950000182906.b.b #27	ENSGT00390000016696 #28	ENSGT00390000007467 #29	ENSGT00390000004601 #30	ENSGT00390000007133 #31	ENSGT00940000157784 #32	ENSGT00940000163036	ENSGT00940000156556 #33	ENSGT00940000159755 #34	ENSGT00520000055635.c.a #36	ENSGT00940000161118 #37	ENSGT00390000003024
Sloth	MODERN SPECIES	6479															GOLGB1 (ENSCHOG00000011909) #21	ENSCHOG00000011892 #22
Armadillo	MODERN SPECIES	4198													EAF2 (ENSDNOG00000042536) #19	IQCB1 (ENSDNOG00000018398) #20	GOLGB1 (ENSDNOG00000044840) #21	HCLS1 (ENSDNOG00000049207) #22	FBXO40 (ENSDNOG00000048461) #23	ARGFX (ENSDNOG00000031231)	ENSDNOG00000048437	POLQ (ENSDNOG00000009810) #26	STXBP5L (ENSDNOG00000008810) #27	GTF2E1 (ENSDNOG00000046763) #28	RABL3 (ENSDNOG00000008174) #29	HGD (ENSDNOG00000023792) #30	NDUFB4 (ENSDNOG00000035843) #31	ENSDNOG00000041310	FSTL1 (ENSDNOG00000038834) #32	ENSDNOG00000033916	LRRC58 (ENSDNOG00000031178) #33	GPR156 (ENSDNOG00000036453) #34	GSK3B (ENSDNOG00000006774) #36