Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00940000154612.m.a.g.b #11	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Canidae	ANCESTRAL SPECIES	17	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00940000154612.m.a.g.b #11	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00940000154612.m.a.g.b #11	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049.w #23	ENSGT00940000163113 #24	ENSGT00940000162049.x #25	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413
Dingo	MODERN SPECIES	231	DNAJB13 (ENSCAFG00020002188) #7	UCP2 (ENSCAFG00020002181) #8	UCP3 (ENSCAFG00020002165) #9	C2CD3 (ENSCAFG00020002084) #10	ENSCAFG00020002068 #11	PPME1 (ENSCAFG00020002049) #12	P4HA3 (ENSCAFG00020001895) #13	PGM2L1 (ENSCAFG00020001866) #14	KCNE3 (ENSCAFG00020001859) #15	LIPT2 (ENSCAFG00020001852) #16	POLD3 (ENSCAFG00020001837) #17	CHRDL2 (ENSCAFG00020001765) #18	RNF169 (ENSCAFG00020001748) #19	XRRA1 (ENSCAFG00020001674) #20	SPCS2 (ENSCAFG00020001665) #21	NEU3 (ENSCAFG00020001651) #22	ENSCAFG00020001644 #23	OR2AT4 (ENSCAFG00020001640) #24	ENSCAFG00020001631 #25	SLCO2B1 (ENSCAFG00020001612) #26	TPBGL (ENSCAFG00020001595) #27	ARRB1 (ENSCAFG00020001583) #28
Dog	MODERN SPECIES	13	PAAF1 (ENSCAFG00845007324)	DNAJB13 (ENSCAFG00845007267) #7	UCP2 (ENSCAFG00845007207) #8	UCP3 (ENSCAFG00845007137) #9	C2CD3 (ENSCAFG00845006752) #10	PPME1 (ENSCAFG00845006643) #12	P4HA3 (ENSCAFG00845006494) #13	PGM2L1 (ENSCAFG00845006417) #14	KCNE3 (ENSCAFG00845006390) #15	LIPT2 (ENSCAFG00845006375) #16	ENSCAFG00845006319	CHRDL2 (ENSCAFG00845006210) #18	RNF169 (ENSCAFG00845006177) #19	XRRA1 (ENSCAFG00845006118) #20	SPCS2 (ENSCAFG00845006071) #21	NEU3 (ENSCAFG00845006035) #22	OR2AT2 (ENSCAFG00845012453) #23	OR2AT2B (ENSCAFG00845012435) #24	ENSCAFG00845012420 #25	SLCO2B1 (ENSCAFG00845012322) #26	ENSCAFG00845012257	ARRB1 (ENSCAFG00845011997) #28	RPS3 (ENSCAFG00845011844)	KLHL35 (ENSCAFG00845011797)	GDPD5 (ENSCAFG00845011562)	SERPINH1 (ENSCAFG00845011365)	MAP6 (ENSCAFG00845011305)	MOGAT2 (ENSCAFG00845011232)	DGAT2 (ENSCAFG00845011120)	UVRAG (ENSCAFG00845010859)	WNT11 (ENSCAFG00845010773)
Red fox	MODERN SPECIES	81	PAAF1 (ENSVVUG00000024532)	DNAJB13 (ENSVVUG00000024528) #7	UCP2 (ENSVVUG00000024525) #8	UCP3 (ENSVVUG00000024520) #9	C2CD3 (ENSVVUG00000024492) #10	PPME1 (ENSVVUG00000024480) #12	P4HA3 (ENSVVUG00000024443) #13	PGM2L1 (ENSVVUG00000024420) #14	KCNE3 (ENSVVUG00000024415) #15	LIPT2 (ENSVVUG00000024412) #16	POLD3 (ENSVVUG00000024403) #17	CHRDL2 (ENSVVUG00000024393) #18	RNF169 (ENSVVUG00000024386) #19	XRRA1 (ENSVVUG00000024378) #20	SPCS2 (ENSVVUG00000024376) #21	NEU3 (ENSVVUG00000024375) #22	ENSVVUG00000024373 #23	OR2AT4 (ENSVVUG00000024372) #24	ENSVVUG00000024368 #23	SLCO2B1 (ENSVVUG00000024363) #26	ARRB1 (ENSVVUG00000024357) #28	RPS3 (ENSVVUG00000024353)	KLHL35 (ENSVVUG00000024352)	GDPD5 (ENSVVUG00000024349)	SERPINH1 (ENSVVUG00000024343)	MAP6 (ENSVVUG00000024341)	MOGAT2 (ENSVVUG00000024340)	DGAT2 (ENSVVUG00000024339)	UVRAG (ENSVVUG00000024337)	WNT11 (ENSVVUG00000024336)	THAP12 (ENSVVUG00000024332)
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00940000154612.m.a.g.b #11	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Ursidae	ANCESTRAL SPECIES	15	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00940000154612.m.a.g.b #11	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000264679	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.a	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d
Ursus	ANCESTRAL SPECIES	36	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000264679	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049.ab #23	ENSGT00940000163113 #24	ENSGT00940000162049.`b.a #23	ENSGT01080000257336.a.c.a #26	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.a	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Polar bear	MODERN SPECIES	302	ENSUMAG00000010356	DNAJB13 (ENSUMAG00000010357) #7	ENSUMAG00000010361 #8	UCP3 (ENSUMAG00000010364) #9	C2CD3 (ENSUMAG00000010411) #10	PPME1 (ENSUMAG00000010578) #12	ENSUMAG00000010596 #11	P4HA3 (ENSUMAG00000010611) #13	PGM2L1 (ENSUMAG00000010658) #14	KCNE3 (ENSUMAG00000010667) #15	ENSUMAG00000010676	CHRDL2 (ENSUMAG00000010688) #18	ENSUMAG00000010704 #20	ENSUMAG00000010705 #20	SPCS2 (ENSUMAG00000010706) #21	NEU3 (ENSUMAG00000010711) #22	ENSUMAG00000010715 #23	OR2AT4 (ENSUMAG00000010718) #24	ENSUMAG00000010723 #23	SLCO2B1 (ENSUMAG00000010739) #26	ARRB1 (ENSUMAG00000010806) #28	ENSUMAG00000010808	ENSUMAG00000010819	GDPD5 (ENSUMAG00000010823)	SERPINH1 (ENSUMAG00000010838)	MOGAT2 (ENSUMAG00000010842)	DGAT2 (ENSUMAG00000010859)	UVRAG (ENSUMAG00000010891)	ENSUMAG00000010943	GVQW3 (ENSUMAG00000010946)	EMSY (ENSUMAG00000010950)
American black bear	MODERN SPECIES	6090											ENSUAMG00000012924 #19	ENSUAMG00000012926 #20	ENSUAMG00000012928 #20	ENSUAMG00000012931	ENSUAMG00000012933	NEU3 (ENSUAMG00000012937) #22
Giant Panda	MODERN SPECIES	18	DNAJB13 (ENSAMEG00000017254) #7	UCP2 (ENSAMEG00000017239) #8	UCP3 (ENSAMEG00000017226) #9	C2CD3 (ENSAMEG00000017216) #10	ENSAMEG00000025260 #11	PPME1 (ENSAMEG00000017200) #12	P4HA3 (ENSAMEG00000017190) #13	PGM2L1 (ENSAMEG00000017168) #14	KCNE3 (ENSAMEG00000020287) #15	LIPT2 (ENSAMEG00000017166) #16	ENSAMEG00000017155	CHRDL2 (ENSAMEG00000017149) #18	RNF169 (ENSAMEG00000017148) #19	XRRA1 (ENSAMEG00000017132) #20	SPCS2 (ENSAMEG00000017127) #21	NEU3 (ENSAMEG00000017126) #22	OR2AT4 (ENSAMEG00000020286) #24	SLCO2B1 (ENSAMEG00000017088) #26	ARRB1 (ENSAMEG00000017062) #28	RPS3 (ENSAMEG00000017051)	KLHL35 (ENSAMEG00000017048)	GDPD5 (ENSAMEG00000017024)	SERPINH1 (ENSAMEG00000017004)	MAP6 (ENSAMEG00000016992)	MOGAT2 (ENSAMEG00000016976)	DGAT2 (ENSAMEG00000016958)	UVRAG (ENSAMEG00000016944)	WNT11 (ENSAMEG00000016932)	THAP12 (ENSAMEG00000016926)	GVQW3 (ENSAMEG00000020284)	EMSY (ENSAMEG00000016911)
Mustelinae	ANCESTRAL SPECIES	25	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d
American mink	MODERN SPECIES	6	ENSNVIG00000021953	DNAJB13 (ENSNVIG00000021956) #7	UCP2 (ENSNVIG00000021964) #8	UCP3 (ENSNVIG00000021995) #9	C2CD3 (ENSNVIG00000022016) #10	PPME1 (ENSNVIG00000022146) #12	P4HA3 (ENSNVIG00000022190) #13	PGM2L1 (ENSNVIG00000022233) #14	KCNE3 (ENSNVIG00000022255) #15	LIPT2 (ENSNVIG00000022257) #16	POLD3 (ENSNVIG00000022266) #17	CRDL2 (ENSNVIG00000022284) #18	RNF169 (ENSNVIG00000022325) #19	XRRA1 (ENSNVIG00000022332) #20	SPCS2 (ENSNVIG00000022377) #21	NEU3 (ENSNVIG00000022399) #22	OR2AT4 (ENSNVIG00000022405) #24	SLCO2B1 (ENSNVIG00000022418) #26	TPBGL (ENSNVIG00000022489) #27	ARRB1 (ENSNVIG00000022499) #28	RPS3 (ENSNVIG00000022524)	KLHL35 (ENSNVIG00000000027)	GDPD5 (ENSNVIG00000000058)	SERPINH1 (ENSNVIG00000000240)	MAP6 (ENSNVIG00000000278)	MOGAT2 (ENSNVIG00000000300)	DGAT2 (ENSNVIG00000000310)	UVRAG (ENSNVIG00000000349)	WNT11 (ENSNVIG00000000391)	ENSNVIG00000000416	GVQW3 (ENSNVIG00000000425)
Ferret	MODERN SPECIES	294	PAAF1 (ENSMPUG00000009602)	DNAJB13 (ENSMPUG00000009521) #7	UCP2 (ENSMPUG00000009517) #8	UCP3 (ENSMPUG00000009444) #9	C2CD3 (ENSMPUG00000009422) #10	PPME1 (ENSMPUG00000009348) #12	P4HA3 (ENSMPUG00000009330) #13	PGM2L1 (ENSMPUG00000009319) #14	KCNE3 (ENSMPUG00000019533) #15	LIPT2 (ENSMPUG00000009304) #16	POLD3 (ENSMPUG00000009299) #17	CHRDL2 (ENSMPUG00000009291) #18	RNF169 (ENSMPUG00000009279) #19	XRRA1 (ENSMPUG00000009266) #20	SPCS2 (ENSMPUG00000009261) #21	NEU3 (ENSMPUG00000009248) #22	OR2AT4 (ENSMPUG00000019531) #24	SLCO2B1 (ENSMPUG00000009234) #26	TPBGL (ENSMPUG00000019529) #27	ARRB1 (ENSMPUG00000009213) #28	RPS3 (ENSMPUG00000009197)	KLHL35 (ENSMPUG00000009085)	GDPD5 (ENSMPUG00000009066)	SERPINH1 (ENSMPUG00000009062)	MAP6 (ENSMPUG00000009054)	MOGAT2 (ENSMPUG00000009005)	DGAT2 (ENSMPUG00000008926)	UVRAG (ENSMPUG00000008808)	WNT11 (ENSMPUG00000008789)	THAP12 (ENSMPUG00000008784)	EMSY (ENSMPUG00000008766)
Felidae	ANCESTRAL SPECIES		ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Panthera	ANCESTRAL SPECIES	23	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Tiger	MODERN SPECIES	152	PAAF1 (ENSPTIG00000014005)	DNAJB13 (ENSPTIG00000012650) #7	UCP2 (ENSPTIG00000011528) #8	UCP3 (ENSPTIG00000010500) #9	C2CD3 (ENSPTIG00000006117) #10	PPME1 (ENSPTIG00000019950) #12	P4HA3 (ENSPTIG00000019317) #13	ENSPTIG00000006901	PGM2L1 (ENSPTIG00000018629) #14	KCNE3 (ENSPTIG00000006865) #15	POLD3 (ENSPTIG00000016047) #17	CHRDL2 (ENSPTIG00000013187) #18	RNF169 (ENSPTIG00000012006) #19	XRRA1 (ENSPTIG00000006459) #20	SPCS2 (ENSPTIG00000002921) #21	NEU3 (ENSPTIG00000019876) #22	SLCO2B1 (ENSPTIG00000017944) #26	ARRB1 (ENSPTIG00000016095) #28	RPS3 (ENSPTIG00000012777)	ENSPTIG00000012295	GDPD5 (ENSPTIG00000008012)	ENSPTIG00000007424	ENSPTIG00000007135	MOGAT2 (ENSPTIG00000005726)	DGAT2 (ENSPTIG00000021220)	ENSPTIG00000020523
Panthera_a	ANCESTRAL SPECIES	24	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00910000147753	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
lion	MODERN SPECIES	10	DNAJB13 (ENSPLOG00000008016) #7	UCP2 (ENSPLOG00000007959) #8	UCP3 (ENSPLOG00000007899) #9	C2CD3 (ENSPLOG00000007682) #10	PPME1 (ENSPLOG00000007494) #12	P4HA3 (ENSPLOG00000007413) #13	PGM2L1 (ENSPLOG00000007360) #14	ENSPLOG00000007335	KCNE3 (ENSPLOG00000007327) #15	LIPT2 (ENSPLOG00000007304) #16	POLD3 (ENSPLOG00000007284) #17	CHRDL2 (ENSPLOG00000007211) #18	RNF169 (ENSPLOG00000007163) #19	XRRA1 (ENSPLOG00000007091) #20	SPCS2 (ENSPLOG00000006952) #21	NEU3 (ENSPLOG00000006924) #22	ENSPLOG00000006910 #23	OR2AT4 (ENSPLOG00000006896) #24	SLCO2B1 (ENSPLOG00000006678) #26	TPBGL (ENSPLOG00000006600) #27	ARRB1 (ENSPLOG00000006514) #28	RPS3 (ENSPLOG00000006386)	KLHL35 (ENSPLOG00000006330)	GDPD5 (ENSPLOG00000006203)	SERPINH1 (ENSPLOG00000006124)	MAP6 (ENSPLOG00000006086)	MOGAT2 (ENSPLOG00000006057)	DGAT2 (ENSPLOG00000005990)	UVRAG (ENSPLOG00000005912)	WNT11 (ENSPLOG00000005866)	THAP12 (ENSPLOG00000005843)
leopard	MODERN SPECIES	17	UCP2 (ENSPPRG00000005240) #8	UCP3 (ENSPPRG00000003873) #9	C2CD3 (ENSPPRG00000002156) #10	PPME1 (ENSPPRG00000019088) #12	P4HA3 (ENSPPRG00000016087) #13	ENSPPRG00000019390	PGM2L1 (ENSPPRG00000012685) #14	ENSPPRG00000019374	KCNE3 (ENSPPRG00000019344) #15	LIPT2 (ENSPPRG00000012003) #16	POLD3 (ENSPPRG00000011534) #17	CHRDL2 (ENSPPRG00000009765) #18	RNF169 (ENSPPRG00000008146) #19	XRRA1 (ENSPPRG00000007628) #20	SPCS2 (ENSPPRG00000005824) #21	NEU3 (ENSPPRG00000004096) #22	ENSPPRG00000018979 #23	SLCO2B1 (ENSPPRG00000002453) #26	TPBGL (ENSPPRG00000001225) #27	ARRB1 (ENSPPRG00000000797) #28	RPS3 (ENSPPRG00000021200)	KLHL35 (ENSPPRG00000016187)	GDPD5 (ENSPPRG00000014276)	SERPINH1 (ENSPPRG00000010542)	ENSPPRG00000010162	MOGAT2 (ENSPPRG00000009822)	DGAT2 (ENSPPRG00000009451)	UVRAG (ENSPPRG00000007658)	WNT11 (ENSPPRG00000006331)	THAP12 (ENSPPRG00000005378)	GVQW3 (ENSPPRG00000018362)
Cat	MODERN SPECIES	241	COA4 (ENSFCAG00000028250)	PAAF1 (ENSFCAG00000026583)	UCP2 (ENSFCAG00000005031) #9	C2CD3 (ENSFCAG00000028884) #10	PPME1 (ENSFCAG00000026344) #12	P4HA3 (ENSFCAG00000007938) #13	PGM2L1 (ENSFCAG00000007942) #14	ENSFCAG00000025621	KCNE3 (ENSFCAG00000007946) #15	LIPT2 (ENSFCAG00000005135) #16	POLD3 (ENSFCAG00000008169) #17	CHRDL2 (ENSFCAG00000008172) #18	RNF169 (ENSFCAG00000043917) #19	XRRA1 (ENSFCAG00000014638) #20	SPCS2 (ENSFCAG00000022532) #21	NEU3 (ENSFCAG00000033977) #22	ENSFCAG00000036568 #23	OR2AT4 (ENSFCAG00000029673) #24	SLCO2B1 (ENSFCAG00000011940) #26	ARRB1 (ENSFCAG00000011941) #28	RPS3 (ENSFCAG00000011942)	KLHL35 (ENSFCAG00000012545)	GDPD5 (ENSFCAG00000011943)	SERPINH1 (ENSFCAG00000011944)	MAP6 (ENSFCAG00000023444)	MOGAT2 (ENSFCAG00000004632)	DGAT2 (ENSFCAG00000040215)	UVRAG (ENSFCAG00000022180)	WNT11 (ENSFCAG00000025418)	THAP12 (ENSFCAG00000006764)	GVQW3 (ENSFCAG00000025300)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000163239	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000163239	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000163239	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Microbat	MODERN SPECIES	1250	DNAJB13 (ENSMLUG00000012101) #7	UCP2 (ENSMLUG00000012109) #8	ENSMLUG00000012118 #9	ENSMLUG00000022897	ENSMLUG00000012130 #10	PPME1 (ENSMLUG00000012151) #12	P4HA3 (ENSMLUG00000012162) #13	PGM2L1 (ENSMLUG00000025308) #14	KCNE3 (ENSMLUG00000013407) #15	LIPT2 (ENSMLUG00000028952) #16	ENSMLUG00000012843	CHRDL2 (ENSMLUG00000014447) #18	RNF169 (ENSMLUG00000014455) #19	XRRA1 (ENSMLUG00000014461) #20	SPCS2 (ENSMLUG00000014468) #21	NEU3 (ENSMLUG00000014473) #22	SLCO2B1 (ENSMLUG00000008962) #26
Greater horseshoe bat	MODERN SPECIES	2	DNAJB13 (ENSRFEG00010015817) #7	Ucp2 (ENSRFEG00010015998) #9	C2CD3 (ENSRFEG00010016160) #10	PPME1 (ENSRFEG00010016253) #12	P4HA3 (ENSRFEG00010016337) #13	PGM2L1 (ENSRFEG00010016411) #14	ENSRFEG00010016450	KCNE3 (ENSRFEG00010016472) #15	LIPT2 (ENSRFEG00010016489) #16	POLD3 (ENSRFEG00010016519) #17	ENSRFEG00010016605	CHRDL2 (ENSRFEG00010016638) #18	RNF169 (ENSRFEG00010016892) #19	XRRA1 (ENSRFEG00010016995) #20	SPCS2 (ENSRFEG00010017525) #21	NEU3 (ENSRFEG00010017632) #22	ENSRFEG00010017649 #24	ENSRFEG00010017695 #24	ENSRFEG00010017708 #23	ENSRFEG00010017732 #23	SLCO2B1 (ENSRFEG00010017798) #26	TPBGL (ENSRFEG00010018053) #27	ARRB1 (ENSRFEG00010018085) #28	RPS3 (ENSRFEG00010018171)	KLHL35 (ENSRFEG00010018271)	GDPD5 (ENSRFEG00010018359)	SERPINH1 (ENSRFEG00010018606)	MAP6 (ENSRFEG00010018658)	MOGAT2 (ENSRFEG00010018707)	DGAT2 (ENSRFEG00010018775)	UVRAG (ENSRFEG00010018929)
Megabat	MODERN SPECIES	2450	DNAJB13 (ENSPVAG00000006662) #7	UCP2 (ENSPVAG00000006666) #8	UCP3 (ENSPVAG00000006667) #9	ENSPVAG00000006668 #10	C2CD3 (ENSPVAG00000006669) #10	PPME1 (ENSPVAG00000006670) #12	P4HA3 (ENSPVAG00000006673) #13	PGM2L1 (ENSPVAG00000006674) #14	KCNE3 (ENSPVAG00000006675) #15	LIPT2 (ENSPVAG00000006676) #16	POLD3 (ENSPVAG00000006677) #17	CHRDL2 (ENSPVAG00000006678) #18	RNF169 (ENSPVAG00000006679) #19	XRRA1 (ENSPVAG00000006681) #20	SPCS2 (ENSPVAG00000006682) #21	NEU3 (ENSPVAG00000006683) #22
Equus	ANCESTRAL SPECIES	15	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000163239	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d
Horse	MODERN SPECIES	28	COA4 (ENSECAG00000022111)	UCP2 (ENSECAG00000018649) #8	UCP3 (ENSECAG00000017011) #9	DNAJB13 (ENSECAG00000018671) #7	C2CD3 (ENSECAG00000012038) #10	PPME1 (ENSECAG00000010756) #12	P4HA3 (ENSECAG00000006917) #13	PGM2L1 (ENSECAG00000018803) #14	KCNE3 (ENSECAG00000007379) #15	LIPT2 (ENSECAG00000017517) #16	POLD3 (ENSECAG00000012624) #17	CHRDL2 (ENSECAG00000011897) #18	RNF169 (ENSECAG00000010781) #19	XRRA1 (ENSECAG00000007758) #20	SPCS2 (ENSECAG00000007179) #21	NEU3 (ENSECAG00000006601) #22	ENSECAG00000059146 #23	TPBGL (ENSECAG00000059109) #27	SLCO2B1 (ENSECAG00000024423) #26	ARRB1 (ENSECAG00000017459) #28	RPS3 (ENSECAG00000013915)	KLHL35 (ENSECAG00000013664)	GDPD5 (ENSECAG00000010098)	SERPINH1 (ENSECAG00000004871)	MAP6 (ENSECAG00000004615)	MOGAT2 (ENSECAG00000025135)	DGAT2 (ENSECAG00000024847)	ENSECAG00000058058	ENSECAG00000018259	UVRAG (ENSECAG00000023818)	WNT11 (ENSECAG00000022188)
Donkey	MODERN SPECIES	12	UCP2 (ENSEASG00005017923) #8	DNAJB13 (ENSEASG00005017929) #7	UCP3 (ENSEASG00005017916) #9	ENSEASG00005017897 #10	ENSEASG00005028756 #10	PPME1 (ENSEASG00005017891) #12	P4HA3 (ENSEASG00005017878) #13	PGM2L1 (ENSEASG00005017865) #14	KCNE3 (ENSEASG00005038189) #15	LIPT2 (ENSEASG00005017860) #16	ENSEASG00005017856	CHRDL2 (ENSEASG00005017832) #18	RNF169 (ENSEASG00005038773) #19	XRRA1 (ENSEASG00005017820) #20	ENSEASG00005017816 #21	NEU3 (ENSEASG00005017815) #22	ENSEASG00005017814 #23	OR2AT4 (ENSEASG00005014267) #24	ENSEASG00005036702 #23	ENSEASG00005035225 #23	SLCO2B1 (ENSEASG00005014263) #26	TPBGL (ENSEASG00005025170) #27	ARRB1 (ENSEASG00005014253) #28	RPS3 (ENSEASG00005014248)	KLHL35 (ENSEASG00005014246)	GDPD5 (ENSEASG00005014243)	SERPINH1 (ENSEASG00005014240)	MAP6 (ENSEASG00005014238)	MOGAT2 (ENSEASG00005014230)	ENSEASG00005014228	UVRAG (ENSEASG00005014226)
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Suina	ANCESTRAL SPECIES	5	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Chacoan peccary	MODERN SPECIES	32	DNAJB13 (ENSCWAG00000002527) #7	UCP2 (ENSCWAG00000002493) #8	UCP3 (ENSCWAG00000002465) #9	C2CD3 (ENSCWAG00000002438) #10	ENSCWAG00000002417	PPME1 (ENSCWAG00000002394) #12	P4HA3 (ENSCWAG00000002379) #13	PGM2L1 (ENSCWAG00000002367) #14	KCNE3 (ENSCWAG00000002355) #15	LIPT2 (ENSCWAG00000002349) #16	ENSCWAG00000002330	CHRDL2 (ENSCWAG00000002300) #18	RNF169 (ENSCWAG00000002279) #19	XRRA1 (ENSCWAG00000002186) #20	SPCS2 (ENSCWAG00000002150) #21	NEU3 (ENSCWAG00000002122) #22	OR2AT4 (ENSCWAG00000002105) #24	SLCO2B1 (ENSCWAG00000002081) #26	TPBGL (ENSCWAG00000002069) #27	ARRB1 (ENSCWAG00000001998) #28	RPS3 (ENSCWAG00000001939)	KLHL35 (ENSCWAG00000001904)	GDPD5 (ENSCWAG00000001855)	SERPINH1 (ENSCWAG00000001819)	ENSCWAG00000001805	MOGAT2 (ENSCWAG00000001781)	DGAT2 (ENSCWAG00000001740)	UVRAG (ENSCWAG00000001705)	WNT11 (ENSCWAG00000001687)	THAP12 (ENSCWAG00000001677)	GVQW3 (ENSCWAG00000001671)
Pig	MODERN SPECIES	17	DNAJB13 (ENSSSCG00000014832) #7	UCP2 (ENSSSCG00000014833) #8	UCP3 (ENSSSCG00000014834) #9	C2CD3 (ENSSSCG00000014835) #10	PPME1 (ENSSSCG00000020856) #12	P4HA3 (ENSSSCG00000014840) #13	PGM2L1 (ENSSSCG00000014838) #14	ENSSSCG00000042110	KCNE3 (ENSSSCG00000029323) #15	LIPT2 (ENSSSCG00000024060) #16	POLD3 (ENSSSCG00000027506)	CHRDL2 (ENSSSCG00000014843) #18	RNF169 (ENSSSCG00000021822) #19	XRRA1 (ENSSSCG00000021702) #20	SPCS2 (ENSSSCG00000014850) #21	NEU3 (ENSSSCG00000021638) #22	OR2AT4 (ENSSSCG00000023029) #24	ENSSSCG00000025925 #23	SLCO2B1 (ENSSSCG00000014851) #26	ARRB1 (ENSSSCG00000014852) #28	RPS3 (ENSSSCG00000014855)	KLHL35 (ENSSSCG00000014854)	GDPD5 (ENSSSCG00000014853)	SERPINH1 (ENSSSCG00000039468)	MAP6 (ENSSSCG00000014860)	ENSSSCG00000014861	ENSSSCG00000061550	DGAT2 (ENSSSCG00000034102)	UVRAG (ENSSSCG00000028979)	WNT11 (ENSSSCG00000022347)	THAP12 (ENSSSCG00000040639)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B.h.b.a #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049.bb #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B.h.b.a #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049.bb #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01010000227694	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B.h.b.a #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049.bb #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01010000227694	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413
Dolphin	MODERN SPECIES	2055										LIPT2 (ENSTTRG00000005752) #16	POLD3 (ENSTTRG00000005758)	CHRDL2 (ENSTTRG00000005768) #18	RNF169 (ENSTTRG00000005774) #19	XRRA1 (ENSTTRG00000005818) #20	SPCS2 (ENSTTRG00000005830) #21	NEU3 (ENSTTRG00000005836) #22	SLCO2B1 (ENSTTRG00000005843) #26	ARRB1 (ENSTTRG00000005853) #28	RPS3 (ENSTTRG00000005858)	KLHL35 (ENSTTRG00000005860)	GDPD5 (ENSTTRG00000005863)
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B.h.b.a #15	ENSGT01000000221138	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049.bb #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01010000227694	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B.h.b.a #15	ENSGT01000000221138	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT01010000229934	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01010000227694	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413
Narwhal	MODERN SPECIES	314	COA4 (ENSMMNG00015020706)	PAAF1 (ENSMMNG00015020687)	DNAJB13 (ENSMMNG00015020642) #7	UCP2 (ENSMMNG00015020552) #8	UCP3 (ENSMMNG00015020523) #9	C2CD3 (ENSMMNG00015020457) #10	PPME1 (ENSMMNG00015020414) #12	PGM2L1 (ENSMMNG00015020391) #14	ENSMMNG00015020370 #15	LIPT2 (ENSMMNG00015020361) #16	ENSMMNG00015020343	CHRDL2 (ENSMMNG00015020311) #18	RNF169 (ENSMMNG00015020277) #19	XRRA1 (ENSMMNG00015020206) #20	ENSMMNG00015020124 #21	NEU3 (ENSMMNG00015020097) #22	SLCO2B1 (ENSMMNG00015019988) #26	TPBGL (ENSMMNG00015019934) #27	ARRB1 (ENSMMNG00015019886) #28	KLHL35 (ENSMMNG00015019832)	ENSMMNG00015019811	RPS3 (ENSMMNG00015019776)	GDPD5 (ENSMMNG00015019694)	SERPINH1 (ENSMMNG00015019659)	MAP6 (ENSMMNG00015019635)	ENSMMNG00015019612	MOGAT2 (ENSMMNG00015019582)	DGAT2 (ENSMMNG00015019561)	LSM4 (ENSMMNG00015019548)	UVRAG (ENSMMNG00015019516)	WNT11 (ENSMMNG00015019462)
Beluga whale	MODERN SPECIES	2	UCP3 (ENSDLEG00000002511) #9	C2CD3 (ENSDLEG00000002578) #10	PPME1 (ENSDLEG00000002797) #12	P4HA3 (ENSDLEG00000002804) #13	PGM2L1 (ENSDLEG00000002819) #14	KCNE3 (ENSDLEG00000002833) #15	ENSDLEG00000002840	LIPT2 (ENSDLEG00000002850) #16	POLD3 (ENSDLEG00000002858)	CHRDL2 (ENSDLEG00000002872) #18	RNF169 (ENSDLEG00000002883) #19	XRRA1 (ENSDLEG00000002903) #20	ENSDLEG00000002925 #20	ENSDLEG00000002932 #21	ENSDLEG00000002942 #21	NEU3 (ENSDLEG00000002947) #22	SLCO2B1 (ENSDLEG00000002954) #26	TPBGL (ENSDLEG00000002963) #27	ARRB1 (ENSDLEG00000002976) #28	RPS3 (ENSDLEG00000003018)	KLHL35 (ENSDLEG00000003032)	ENSDLEG00000003043	GDPD5 (ENSDLEG00000003060)	SERPINH1 (ENSDLEG00000003078)	MAP6 (ENSDLEG00000003085)	ENSDLEG00000003098	MOGAT2 (ENSDLEG00000003103)	DGAT2 (ENSDLEG00000003119)	LSM4 (ENSDLEG00000003159)	WNT11 (ENSDLEG00000003165)	THAP12 (ENSDLEG00000003173)
Vaquita	MODERN SPECIES	19	DNAJB13 (ENSPSNG00000007650) #7	UCP2 (ENSPSNG00000007594) #8	UCP3 (ENSPSNG00000007548) #9	C2CD3 (ENSPSNG00000007424) #10	PPME1 (ENSPSNG00000007333) #12	P4HA3 (ENSPSNG00000007275) #13	PGM2L1 (ENSPSNG00000007242) #14	ENSPSNG00000007219 #15	ENSPSNG00000007198	LIPT2 (ENSPSNG00000007174) #16	POLD3 (ENSPSNG00000007123) #17	CHRDL2 (ENSPSNG00000007083) #18	RNF169 (ENSPSNG00000007029) #19	XRRA1 (ENSPSNG00000006930) #20	ENSPSNG00000006830 #21	NEU3 (ENSPSNG00000006794) #22	ENSPSNG00000006780 #23	ENSPSNG00000006768 #23	SLCO2B1 (ENSPSNG00000006578) #26	TPBGL (ENSPSNG00000006486) #27	ARRB1 (ENSPSNG00000006320) #28	RPS3 (ENSPSNG00000006180)	KLHL35 (ENSPSNG00000006126)	GDPD5 (ENSPSNG00000005980)	SERPINH1 (ENSPSNG00000005838)	MAP6 (ENSPSNG00000005782)	MOGAT2 (ENSPSNG00000005741)	DGAT2 (ENSPSNG00000005697)	LSM4 (ENSPSNG00000005672)	UVRAG (ENSPSNG00000005649)	WNT11 (ENSPSNG00000005604)
Sperm whale	MODERN SPECIES	7	UCP2 (ENSPCTG00005015725) #8	UCP3 (ENSPCTG00005015578) #9	C2CD3 (ENSPCTG00005015258) #10	ENSPCTG00005015122 #12	P4HA3 (ENSPCTG00005015054) #13	PGM2L1 (ENSPCTG00005014991) #14	KCNE3 (ENSPCTG00005014974) #15	ENSPCTG00005014938	LIPT2 (ENSPCTG00005014884) #16	POLD3 (ENSPCTG00005014767) #17	CHRDL2 (ENSPCTG00005014720) #18	ENSPCTG00005014677	RNF169 (ENSPCTG00005014594) #19	XRRA1 (ENSPCTG00005014504) #20	SPCS2 (ENSPCTG00005014290) #21	NEU3 (ENSPCTG00005014228) #22	ENSPCTG00005014215 #23	SLCO2B1 (ENSPCTG00005013315) #26	TPBGL (ENSPCTG00005013251) #27	ARRB1 (ENSPCTG00005012837) #28	RPS3 (ENSPCTG00005012736)	KLHL35 (ENSPCTG00005012608)	GDPD5 (ENSPCTG00005012361)	SERPINH1 (ENSPCTG00005012284)	MAP6 (ENSPCTG00005012178)	ENSPCTG00005012145	MOGAT2 (ENSPCTG00005012047)	DGAT2 (ENSPCTG00005011874)	ENSPCTG00005011854	UVRAG (ENSPCTG00005011757)	WNT11 (ENSPCTG00005011701)
Blue whale	MODERN SPECIES	19	DNAJB13 (ENSBMSG00010014170) #7	UCP2 (ENSBMSG00010014121) #8	UCP3 (ENSBMSG00010014042) #9	C2CD3 (ENSBMSG00010013974) #10	PPME1 (ENSBMSG00010013879) #12	P4HA3 (ENSBMSG00010013836) #13	ENSBMSG00010007257	PGM2L1 (ENSBMSG00010007245) #14	ENSBMSG00010007235 #15	LIPT2 (ENSBMSG00010007226) #16	POLD3 (ENSBMSG00010007215) #17	CHRDL2 (ENSBMSG00010007185) #18	RNF169 (ENSBMSG00010007157) #19	XRRA1 (ENSBMSG00010007133) #20	ENSBMSG00010007104 #21	NEU3 (ENSBMSG00010007095) #22	ENSBMSG00010007063 #23	ENSBMSG00010007056 #23	SLCO2B1 (ENSBMSG00010006926) #26	TPBGL (ENSBMSG00010006875) #27	ARRB1 (ENSBMSG00010006812) #28	KLHL35 (ENSBMSG00010006735)	RPS3 (ENSBMSG00010006696)	GDPD5 (ENSBMSG00010006559)	SERPINH1 (ENSBMSG00010006487)	MAP6 (ENSBMSG00010006468)	MOGAT2 (ENSBMSG00010006441)	DGAT2 (ENSBMSG00010006424)	UVRAG (ENSBMSG00010006403)	WNT11 (ENSBMSG00010006371)	THAP12 (ENSBMSG00010006359)
Pecora	ANCESTRAL SPECIES	7	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01060000248648 #17	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT00970000197259	ENSGT01030000234582.e.b.g.b.a.a.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877
Yarkand deer	MODERN SPECIES		ENSCHYG00000003273	DNAJB13 (ENSCHYG00000003279) #7	UCP2 (ENSCHYG00000003304) #8	ENSCHYG00000003318	UCP3 (ENSCHYG00000003329) #9	C2CD3 (ENSCHYG00000003384) #10	PPME1 (ENSCHYG00000003704) #12	PGM2L1 (ENSCHYG00000003778) #14	KCNE3 (ENSCHYG00000003907) #15	LIPT2 (ENSCHYG00000003910) #16	POLD3 (ENSCHYG00000003916) #17	CHRDL2 (ENSCHYG00000003936) #18	RNF169 (ENSCHYG00000003956) #19	XRRA1 (ENSCHYG00000003983) #20	ENSCHYG00000004004 #21	NEU3 (ENSCHYG00000004022) #22	ENSCHYG00000004026 #23	OR2AT4 (ENSCHYG00000004032) #24	ENSCHYG00000004041 #23	ENSCHYG00000004045 #23	SLCO2B1 (ENSCHYG00000004067) #26	TPBGL (ENSCHYG00000004162) #27	ARRB1 (ENSCHYG00000004204) #28	RPS3 (ENSCHYG00000004407)	KLHL35 (ENSCHYG00000004438)	GDPD5 (ENSCHYG00000004461)	SERPINH1 (ENSCHYG00000004527)	MAP6 (ENSCHYG00000004581)	ENSCHYG00000004593	ENSCHYG00000004657	ENSCHYG00000004681
Percora_a	ANCESTRAL SPECIES	6	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT00970000197259	ENSGT01030000234582.e.b.g.b.a.a.a.a.b	ENSGT01030000234582.e.b.g.b.a.a.b	ENSGT01030000234582.e.b.g.a.a
Bovidae	ANCESTRAL SPECIES	6	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT00970000197259	ENSGT01030000234582.e.b.g.b.a.a.a.a.b	ENSGT01030000234582.e.b.g.b.a.a.b	ENSGT01030000234582.e.b.g.a.a
Caprinae	ANCESTRAL SPECIES	6	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT00940000163113 #24	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT01030000234582.e.b.g.b.b	ENSGT01030000234582.e.b.g.b.a.b	ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a	ENSGT01030000234582.e.b.g.b.a.a.b
Goat	MODERN SPECIES	6	DNAJB13 (ENSCHIG00000014945) #7	UCP2 (ENSCHIG00000016684) #8	UCP3 (ENSCHIG00000021029) #9	C2CD3 (ENSCHIG00000010366) #10	PPME1 (ENSCHIG00000013753) #12	P4HA3 (ENSCHIG00000021364) #13	PGM2L1 (ENSCHIG00000025872) #14	KCNE3 (ENSCHIG00000004672) #15	ENSCHIG00000008399	LIPT2 (ENSCHIG00000023926) #16	ENSCHIG00000023669	CHRDL2 (ENSCHIG00000015102) #18	RNF169 (ENSCHIG00000006555) #19	XRRA1 (ENSCHIG00000022337) #20	SPCS2 (ENSCHIG00000010577) #21	NEU3 (ENSCHIG00000025082) #22	ENSCHIG00000005983 #23	OR2AT4 (ENSCHIG00000006169) #24	SLCO2B1 (ENSCHIG00000008646) #26	ARRB1 (ENSCHIG00000013620) #28	RPS3 (ENSCHIG00000012342)	KLHL35 (ENSCHIG00000024312)	GDPD5 (ENSCHIG00000014683)	SERPINH1 (ENSCHIG00000002757)	MAP6 (ENSCHIG00000023796)	ENSCHIG00000022165	ENSCHIG00000016754	ENSCHIG00000017465	ENSCHIG00000016227	ENSCHIG00000025677	ENSCHIG00000015313
Rambouillet Sheep	MODERN SPECIES	6	PAAF1 (ENSOARG00020024109)	DNAJB13 (ENSOARG00020024172) #7	UCP2 (ENSOARG00020024218) #8	UCP3 (ENSOARG00020003230) #9	C2CD3 (ENSOARG00020003293) #10	PPME1 (ENSOARG00020003715) #12	P4HA3 (ENSOARG00020003763) #13	PGM2L1 (ENSOARG00020003843) #14	KCNE3 (ENSOARG00020003867) #15	LIPT2 (ENSOARG00020003884) #16	POLD3 (ENSOARG00020003908)	CHRDL2 (ENSOARG00020003968) #18	RNF169 (ENSOARG00020004047) #19	XRRA1 (ENSOARG00020004106) #20	SPCS2 (ENSOARG00020004400) #21	NEU3 (ENSOARG00020004457) #22	SLCO2B1 (ENSOARG00020004500) #26	ENSOARG00020004621 #23	OR2AT4 (ENSOARG00020004633) #24	ENSOARG00020004648 #23	ENSOARG00020004670 #23	TPBGL (ENSOARG00020004687) #27	ARRB1 (ENSOARG00020004714) #28	RPS3 (ENSOARG00020004797)	KLHL35 (ENSOARG00020004876)	GDPD5 (ENSOARG00020004944)	ENSOARG00020005102	SERPINH1 (ENSOARG00020005114)	MOGAT2 (ENSOARG00020005152)	ENSOARG00020005200	ENSOARG00020005275
Bovinae	ANCESTRAL SPECIES	26	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT01030000234582.e.b.g.b.b	ENSGT01030000234582.e.b.g.b.a.b	ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a	ENSGT00390000007473.d	ENSGT01030000234582.e.b.g.b.a.a.b
Bos	ANCESTRAL SPECIES	25	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00940000163089.b.x.b.b.d	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT01030000234582.e.b.g.b.b	ENSGT01030000234582.e.b.g.b.a.b	ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a	ENSGT00390000007473.d	ENSGT01030000234582.e.b.g.b.a.a.b
Bos_a	ANCESTRAL SPECIES	44	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT00970000197259
Domestic yak	MODERN SPECIES	4	ENSBGRG00000004527	C2CD3 (ENSBGRG00000004150) #10	PPME1 (ENSBGRG00000003915) #12	P4HA3 (ENSBGRG00000003823) #13	ENSBGRG00000003813	PGM2L1 (ENSBGRG00000003748) #14	ENSBGRG00000003710	KCNE3 (ENSBGRG00000024658) #15	LIPT2 (ENSBGRG00000024650) #16	ENSBGRG00000024546	CHRDL2 (ENSBGRG00000024469) #18	ENSBGRG00000024433	RNF169 (ENSBGRG00000024385) #19	XRRA1 (ENSBGRG00000024307) #20	SPCS2 (ENSBGRG00000024243) #21	NEU3 (ENSBGRG00000024225) #22	ENSBGRG00000024218 #23	OR2AT4 (ENSBGRG00000024199) #24	ENSBGRG00000024185 #23	ENSBGRG00000024166 #23	SLCO2B1 (ENSBGRG00000023872) #26	TPBGL (ENSBGRG00000023837) #27	ARRB1 (ENSBGRG00000023441) #28	RPS3 (ENSBGRG00000023214)	KLHL35 (ENSBGRG00000023155)	GDPD5 (ENSBGRG00000022949)	SERPINH1 (ENSBGRG00000022881)	ENSBGRG00000022851	ENSBGRG00000022776	ENSBGRG00000022758	ENSBGRG00000022742
Wild yak	MODERN SPECIES	1503		UCP3 (ENSBMUG00000002914) #9	C2CD3 (ENSBMUG00000003017) #10	ENSBMUG00000003074	PPME1 (ENSBMUG00000003100) #12	P4HA3 (ENSBMUG00000003124) #13	ENSBMUG00000003135	PGM2L1 (ENSBMUG00000003154) #14	KCNE3 (ENSBMUG00000003174) #15	LIPT2 (ENSBMUG00000003209) #16	ENSBMUG00000003228	CHRDL2 (ENSBMUG00000003270) #18	RNF169 (ENSBMUG00000003301) #19	XRRA1 (ENSBMUG00000003408) #20	SPCS2 (ENSBMUG00000003427) #21	NEU3 (ENSBMUG00000003443) #22	ENSBMUG00000003461 #23	OR2AT4 (ENSBMUG00000003471) #24	ENSBMUG00000003483 #23	ENSBMUG00000003492 #23	SLCO2B1 (ENSBMUG00000003583) #26	ARRB1 (ENSBMUG00000003695) #28	RPS3 (ENSBMUG00000003751)	KLHL35 (ENSBMUG00000003800)	GDPD5 (ENSBMUG00000003936)	SERPINH1 (ENSBMUG00000004021)	MAP6 (ENSBMUG00000004069)	ENSBMUG00000004128
Bos_b	ANCESTRAL SPECIES	40	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00940000163089.b.x.b.b.d	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT01100000263806	ENSGT00940000161241 #18	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00940000163536 #27	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b.h	ENSGT00970000197259	ENSGT01030000234582.e.b.g.b.b	ENSGT01030000234582.e.b.g.b.a.a.a.a.b	ENSGT01030000234582.e.b.g.b.a.a.b	ENSGT01030000234582.e.b.g.a.b
Hybrid Bos Indicus	MODERN SPECIES	6	UCP3 (ENSBIXG00005027973) #9	ENSBIXG00005028004	ENSBIXG00005028014	C2CD3 (ENSBIXG00005028267) #10	PPME1 (ENSBIXG00005028331) #12	P4HA3 (ENSBIXG00005004876) #13	PGM2L1 (ENSBIXG00005028456) #14	KCNE3 (ENSBIXG00005028481) #15	LIPT2 (ENSBIXG00005002463) #16	ENSBIXG00005004912	CHRDL2 (ENSBIXG00005028567) #18	ENSBIXG00005028580	RNF169 (ENSBIXG00005028615) #19	XRRA1 (ENSBIXG00005004977) #20	SPCS2 (ENSBIXG00005002321) #21	NEU3 (ENSBIXG00005028847) #22	SLCO2B1 (ENSBIXG00005028960) #26	TPBGL (ENSBIXG00005005103) #27	ARRB1 (ENSBIXG00005001993) #28	RPS3 (ENSBIXG00005005177)	KLHL35 (ENSBIXG00005001838)	GDPD5 (ENSBIXG00005029191)	SERPINH1 (ENSBIXG00005001605)	MAP6 (ENSBIXG00005001586)	ENSBIXG00005010753	ENSBIXG00005010772	ENSBIXG00005010874	ENSBIXG00005010894	ENSBIXG00005005811	ENSBIXG00005010939	ENSBIXG00005010950
Cow	MODERN SPECIES	6	C2CD3 (ENSBTAG00000002907) #10	C2CD3 (ENSBTAG00000054229) #10	ENSBTAG00000049655	PPME1 (ENSBTAG00000027612) #12	P4HA3 (ENSBTAG00000006579) #13	ENSBTAG00000027610	PGM2L1 (ENSBTAG00000000770) #14	KCNE3 (ENSBTAG00000011873) #15	LIPT2 (ENSBTAG00000008227) #16	POLD3 (ENSBTAG00000016869)	CHRDL2 (ENSBTAG00000021306) #18	RNF169 (ENSBTAG00000000727) #19	ENSBTAG00000054207	XRRA1 (ENSBTAG00000006610) #20	SPCS2 (ENSBTAG00000006644) #21	NEU3 (ENSBTAG00000025931) #22	OR2AT2C (ENSBTAG00000047344) #23	ENSBTAG00000048088 #23	SLCO2B1 (ENSBTAG00000015596) #26	TPBGL (ENSBTAG00000019622) #27	ARRB1 (ENSBTAG00000020485) #28	RPS3 (ENSBTAG00000005620)	KLHL35 (ENSBTAG00000015087)	GDPD5 (ENSBTAG00000031777)	SERPINH1 (ENSBTAG00000001027)	MAP6 (ENSBTAG00000001028)	MOGAT2 (ENSBTAG00000049519)	ENSBTAG00000053794	ENSBTAG00000047111	ENSBTAG00000017443	ENSBTAG00000015091
American bison	MODERN SPECIES	3168																NEU3 (ENSBBBG00000022546) #22	ENSBBBG00000022551 #23	OR2AT4 (ENSBBBG00000022555) #24	ENSBBBG00000022561 #23	SLCO2B1 (ENSBBBG00000005968) #26	TPBGL (ENSBBBG00000005974) #27	ARRB1 (ENSBBBG00000022736) #28	RPS3 (ENSBBBG00000022815)	ENSBBBG00000022826	GDPD5 (ENSBBBG00000022948)	SERPINH1 (ENSBBBG00000022977)	MAP6 (ENSBBBG00000023028)	ENSBBBG00000023058	ENSBBBG00000023066	ENSBBBG00000023073	ENSBBBG00000023075
Siberian musk deer	MODERN SPECIES	1173	DNAJB13 (ENSMMSG00000012170) #7	UCP2 (ENSMMSG00000012130) #8	ENSMMSG00000012118	UCP3 (ENSMMSG00000012079) #9	C2CD3 (ENSMMSG00000011889) #10	PPME1 (ENSMMSG00000011768) #12	P4HA3 (ENSMMSG00000011730) #13	PGM2L1 (ENSMMSG00000011704) #14	KCNE3 (ENSMMSG00000011690) #15	LIPT2 (ENSMMSG00000011677) #16	ENSMMSG00000011605	CHRDL2 (ENSMMSG00000011519) #18	RNF169 (ENSMMSG00000011474) #19	XRRA1 (ENSMMSG00000011230) #20	ENSMMSG00000011190 #21	NEU3 (ENSMMSG00000011174) #22	OR2AT4 (ENSMMSG00000011148) #24	ENSMMSG00000011132 #23	SLCO2B1 (ENSMMSG00000010784) #26	TPBGL (ENSMMSG00000010742) #27	ARRB1 (ENSMMSG00000010638) #28	RPS3 (ENSMMSG00000010456)	KLHL35 (ENSMMSG00000010389)	GDPD5 (ENSMMSG00000010257)	ENSMMSG00000010185	ENSMMSG00000010133	ENSMMSG00000010080	ENSMMSG00000010044	ENSMMSG00000010002	ENSMMSG00000009931
Camelidae	ANCESTRAL SPECIES	32	ENSGT00390000005948	ENSGT00940000158090 #7	ENSGT00940000159524 #8	ENSGT00940000161030 #9	ENSGT00510000048072 #10	ENSGT00390000004396 #12	ENSGT00940000158967 #13	ENSGT00940000158353 #14	ENSGT00940000155001.B #15	ENSGT00390000006450 #16	ENSGT00940000163239	ENSGT00940000161241 #18	ENSGT00940000153680.b #19	ENSGT00390000016048 #20	ENSGT00440000038181 #21	ENSGT00950000182944.A #22	ENSGT00940000163113 #24	ENSGT00940000162049 #23	ENSGT01080000257336.a.c.a #26	ENSGT00950000182887.C.a.b #28	ENSGT00390000008610.a.b.a.b	ENSGT00940000161093	ENSGT00940000159690	ENSGT00940000156163	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT00970000197259	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b
Alpaca	MODERN SPECIES	1706													RNF169 (ENSVPAG00000010938) #19	XRRA1 (ENSVPAG00000010942) #20	SPCS2 (ENSVPAG00000010946) #21	NEU3 (ENSVPAG00000010949) #22
Arabian camel	MODERN SPECIES	1	PAAF1 (ENSCDRG00005002435)	DNAJB13 (ENSCDRG00005002468) #7	ENSCDRG00005002493 #8	ENSCDRG00005002523 #9	C2CD3 (ENSCDRG00005002561) #10	PPME1 (ENSCDRG00005002613) #12	P4HA3 (ENSCDRG00005002632) #13	PGM2L1 (ENSCDRG00005002666) #14	KCNE3 (ENSCDRG00005002694) #15	LIPT2 (ENSCDRG00005002708) #16	ENSCDRG00005002729	CHRDL2 (ENSCDRG00005002767) #18	RNF169 (ENSCDRG00005002806) #19	XRRA1 (ENSCDRG00005002862) #20	SPCS2 (ENSCDRG00005002935) #21	NEU3 (ENSCDRG00005002967) #22	OR2AT4 (ENSCDRG00005002973) #24	ENSCDRG00005002994 #23	SLCO2B1 (ENSCDRG00005003073) #26	ARRB1 (ENSCDRG00005003177) #28	ENSCDRG00005003279	KLHL35 (ENSCDRG00005003311)	GDPD5 (ENSCDRG00005003371)	SERPINH1 (ENSCDRG00005003481)	MAP6 (ENSCDRG00005003550)	MOGAT2 (ENSCDRG00005003678)	ENSCDRG00005003755	DGAT2 (ENSCDRG00005003787)	UVRAG (ENSCDRG00005003820)	WNT11 (ENSCDRG00005003887)	THAP12 (ENSCDRG00005003929)
Eulipotyphla	ANCESTRAL SPECIES	2230															ENSGT00440000038181 #21	ENSGT00950000182944.A #22
Common shrew	MODERN SPECIES	12138																NEU3 (ENSSARG00000002350) #22
Hedgehog	MODERN SPECIES	6103															SPCS2 (ENSEEUG00000013108) #21	NEU3 (ENSEEUG00000013264) #22