Vertebrata ANCESTRAL SPECIES ENSGT00950000182944.A #22 Gnathostomata ANCESTRAL SPECIES 1515 ENSGT00950000182944.A #22 ENSGT00390000015701 Euteleostomi ANCESTRAL SPECIES 97 ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00390000015701 ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000175321 ENSGT00940000159817 ENSGT00940000157424 ENSGT00510000047611 ENSGT00940000168882 ENSGT00390000012961 ENSGT00940000161147 ENSGT00940000156576 ENSGT00950000183144.A ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b Sarcopterygii ANCESTRAL SPECIES 374 ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00390000016048 ENSGT00940000175321 ENSGT00940000153936.b ENSGT00950000182887.C.a.b Tetrapoda ANCESTRAL SPECIES 179 ENSGT00940000161241 ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00390000016048 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000175321 Amniota ANCESTRAL SPECIES 102 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000175321 Mammalia ANCESTRAL SPECIES 128 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00960000190186 Theria ANCESTRAL SPECIES 15 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a ENSGT00390000009554 Eutheria ANCESTRAL SPECIES 3 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Eulipotyphla ANCESTRAL SPECIES 2230 ENSGT00440000038181 ENSGT00950000182944.A #22 Common shrew MODERN SPECIES 12138 NEU3 (ENSSARG00000002350) #22 Hedgehog MODERN SPECIES 6103 SPCS2 (ENSEEUG00000013108) NEU3 (ENSEEUG00000013264) #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Artiodactyla ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Suina ANCESTRAL SPECIES 5 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Chacoan peccary MODERN SPECIES 32 DNAJB13 (ENSCWAG00000002527) UCP2 (ENSCWAG00000002493) UCP3 (ENSCWAG00000002465) C2CD3 (ENSCWAG00000002438) ENSCWAG00000002417 PPME1 (ENSCWAG00000002394) P4HA3 (ENSCWAG00000002379) PGM2L1 (ENSCWAG00000002367) KCNE3 (ENSCWAG00000002355) LIPT2 (ENSCWAG00000002349) ENSCWAG00000002330 CHRDL2 (ENSCWAG00000002300) RNF169 (ENSCWAG00000002279) XRRA1 (ENSCWAG00000002186) SPCS2 (ENSCWAG00000002150) NEU3 (ENSCWAG00000002122) #22 OR2AT4 (ENSCWAG00000002105) SLCO2B1 (ENSCWAG00000002081) TPBGL (ENSCWAG00000002069) ARRB1 (ENSCWAG00000001998) RPS3 (ENSCWAG00000001939) KLHL35 (ENSCWAG00000001904) GDPD5 (ENSCWAG00000001855) SERPINH1 (ENSCWAG00000001819) ENSCWAG00000001805 MOGAT2 (ENSCWAG00000001781) DGAT2 (ENSCWAG00000001740) UVRAG (ENSCWAG00000001705) WNT11 (ENSCWAG00000001687) THAP12 (ENSCWAG00000001677) GVQW3 (ENSCWAG00000001671) Pig MODERN SPECIES 17 DNAJB13 (ENSSSCG00000014832) UCP2 (ENSSSCG00000014833) UCP3 (ENSSSCG00000014834) C2CD3 (ENSSSCG00000014835) PPME1 (ENSSSCG00000020856) P4HA3 (ENSSSCG00000014840) PGM2L1 (ENSSSCG00000014838) ENSSSCG00000042110 KCNE3 (ENSSSCG00000029323) LIPT2 (ENSSSCG00000024060) POLD3 (ENSSSCG00000027506) CHRDL2 (ENSSSCG00000014843) RNF169 (ENSSSCG00000021822) XRRA1 (ENSSSCG00000021702) SPCS2 (ENSSSCG00000014850) NEU3 (ENSSSCG00000021638) #22 OR2AT4 (ENSSSCG00000023029) ENSSSCG00000025925 SLCO2B1 (ENSSSCG00000014851) ARRB1 (ENSSSCG00000014852) RPS3 (ENSSSCG00000014855) KLHL35 (ENSSSCG00000014854) GDPD5 (ENSSSCG00000014853) SERPINH1 (ENSSSCG00000039468) MAP6 (ENSSSCG00000014860) ENSSSCG00000014861 ENSSSCG00000061550 DGAT2 (ENSSSCG00000034102) UVRAG (ENSSSCG00000028979) WNT11 (ENSSSCG00000022347) THAP12 (ENSSSCG00000040639) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Cetacea ANCESTRAL SPECIES 4 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B.h.b.a ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b ENSGT00440000033232.d Odontoceti ANCESTRAL SPECIES 4 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B.h.b.a ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01010000227694 ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00610000086173.a.b ENSGT00390000012877 ENSGT00940000158413 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B.h.b.a ENSGT00390000006450 ENSGT01100000263806 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01010000227694 ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00610000086173.a.b ENSGT00390000012877 ENSGT00940000158413 Dolphin MODERN SPECIES 2055 LIPT2 (ENSTTRG00000005752) POLD3 (ENSTTRG00000005758) CHRDL2 (ENSTTRG00000005768) RNF169 (ENSTTRG00000005774) XRRA1 (ENSTTRG00000005818) SPCS2 (ENSTTRG00000005830) NEU3 (ENSTTRG00000005836) #22 SLCO2B1 (ENSTTRG00000005843) ARRB1 (ENSTTRG00000005853) RPS3 (ENSTTRG00000005858) KLHL35 (ENSTTRG00000005860) GDPD5 (ENSTTRG00000005863) Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B.h.b.a ENSGT01000000221138 ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01010000227694 ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00610000086173.a.b ENSGT00390000012877 ENSGT00940000158413 Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B.h.b.a ENSGT01000000221138 ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT01010000229934 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01010000227694 ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00610000086173.a.b ENSGT00390000012877 ENSGT00940000158413 Narwhal MODERN SPECIES 314 COA4 (ENSMMNG00015020706) PAAF1 (ENSMMNG00015020687) DNAJB13 (ENSMMNG00015020642) UCP2 (ENSMMNG00015020552) UCP3 (ENSMMNG00015020523) C2CD3 (ENSMMNG00015020457) PPME1 (ENSMMNG00015020414) PGM2L1 (ENSMMNG00015020391) ENSMMNG00015020370 LIPT2 (ENSMMNG00015020361) ENSMMNG00015020343 CHRDL2 (ENSMMNG00015020311) RNF169 (ENSMMNG00015020277) XRRA1 (ENSMMNG00015020206) ENSMMNG00015020124 NEU3 (ENSMMNG00015020097) #22 SLCO2B1 (ENSMMNG00015019988) TPBGL (ENSMMNG00015019934) ARRB1 (ENSMMNG00015019886) KLHL35 (ENSMMNG00015019832) ENSMMNG00015019811 RPS3 (ENSMMNG00015019776) GDPD5 (ENSMMNG00015019694) SERPINH1 (ENSMMNG00015019659) MAP6 (ENSMMNG00015019635) ENSMMNG00015019612 MOGAT2 (ENSMMNG00015019582) DGAT2 (ENSMMNG00015019561) LSM4 (ENSMMNG00015019548) UVRAG (ENSMMNG00015019516) WNT11 (ENSMMNG00015019462) Beluga whale MODERN SPECIES 2 UCP3 (ENSDLEG00000002511) C2CD3 (ENSDLEG00000002578) PPME1 (ENSDLEG00000002797) P4HA3 (ENSDLEG00000002804) PGM2L1 (ENSDLEG00000002819) KCNE3 (ENSDLEG00000002833) ENSDLEG00000002840 LIPT2 (ENSDLEG00000002850) POLD3 (ENSDLEG00000002858) CHRDL2 (ENSDLEG00000002872) RNF169 (ENSDLEG00000002883) XRRA1 (ENSDLEG00000002903) ENSDLEG00000002925 ENSDLEG00000002932 ENSDLEG00000002942 NEU3 (ENSDLEG00000002947) #22 SLCO2B1 (ENSDLEG00000002954) TPBGL (ENSDLEG00000002963) ARRB1 (ENSDLEG00000002976) RPS3 (ENSDLEG00000003018) KLHL35 (ENSDLEG00000003032) ENSDLEG00000003043 GDPD5 (ENSDLEG00000003060) SERPINH1 (ENSDLEG00000003078) MAP6 (ENSDLEG00000003085) ENSDLEG00000003098 MOGAT2 (ENSDLEG00000003103) DGAT2 (ENSDLEG00000003119) LSM4 (ENSDLEG00000003159) WNT11 (ENSDLEG00000003165) THAP12 (ENSDLEG00000003173) Vaquita MODERN SPECIES 19 DNAJB13 (ENSPSNG00000007650) UCP2 (ENSPSNG00000007594) UCP3 (ENSPSNG00000007548) C2CD3 (ENSPSNG00000007424) PPME1 (ENSPSNG00000007333) P4HA3 (ENSPSNG00000007275) PGM2L1 (ENSPSNG00000007242) ENSPSNG00000007219 ENSPSNG00000007198 LIPT2 (ENSPSNG00000007174) POLD3 (ENSPSNG00000007123) CHRDL2 (ENSPSNG00000007083) RNF169 (ENSPSNG00000007029) XRRA1 (ENSPSNG00000006930) ENSPSNG00000006830 NEU3 (ENSPSNG00000006794) #22 ENSPSNG00000006780 ENSPSNG00000006768 SLCO2B1 (ENSPSNG00000006578) TPBGL (ENSPSNG00000006486) ARRB1 (ENSPSNG00000006320) RPS3 (ENSPSNG00000006180) KLHL35 (ENSPSNG00000006126) GDPD5 (ENSPSNG00000005980) SERPINH1 (ENSPSNG00000005838) MAP6 (ENSPSNG00000005782) MOGAT2 (ENSPSNG00000005741) DGAT2 (ENSPSNG00000005697) LSM4 (ENSPSNG00000005672) UVRAG (ENSPSNG00000005649) WNT11 (ENSPSNG00000005604) Sperm whale MODERN SPECIES 7 UCP2 (ENSPCTG00005015725) UCP3 (ENSPCTG00005015578) C2CD3 (ENSPCTG00005015258) ENSPCTG00005015122 P4HA3 (ENSPCTG00005015054) PGM2L1 (ENSPCTG00005014991) KCNE3 (ENSPCTG00005014974) ENSPCTG00005014938 LIPT2 (ENSPCTG00005014884) POLD3 (ENSPCTG00005014767) CHRDL2 (ENSPCTG00005014720) ENSPCTG00005014677 RNF169 (ENSPCTG00005014594) XRRA1 (ENSPCTG00005014504) SPCS2 (ENSPCTG00005014290) NEU3 (ENSPCTG00005014228) #22 ENSPCTG00005014215 SLCO2B1 (ENSPCTG00005013315) TPBGL (ENSPCTG00005013251) ARRB1 (ENSPCTG00005012837) RPS3 (ENSPCTG00005012736) KLHL35 (ENSPCTG00005012608) GDPD5 (ENSPCTG00005012361) SERPINH1 (ENSPCTG00005012284) MAP6 (ENSPCTG00005012178) ENSPCTG00005012145 MOGAT2 (ENSPCTG00005012047) DGAT2 (ENSPCTG00005011874) ENSPCTG00005011854 UVRAG (ENSPCTG00005011757) WNT11 (ENSPCTG00005011701) Blue whale MODERN SPECIES 19 DNAJB13 (ENSBMSG00010014170) UCP2 (ENSBMSG00010014121) UCP3 (ENSBMSG00010014042) C2CD3 (ENSBMSG00010013974) PPME1 (ENSBMSG00010013879) P4HA3 (ENSBMSG00010013836) ENSBMSG00010007257 PGM2L1 (ENSBMSG00010007245) ENSBMSG00010007235 LIPT2 (ENSBMSG00010007226) POLD3 (ENSBMSG00010007215) CHRDL2 (ENSBMSG00010007185) RNF169 (ENSBMSG00010007157) XRRA1 (ENSBMSG00010007133) ENSBMSG00010007104 NEU3 (ENSBMSG00010007095) #22 ENSBMSG00010007063 ENSBMSG00010007056 SLCO2B1 (ENSBMSG00010006926) TPBGL (ENSBMSG00010006875) ARRB1 (ENSBMSG00010006812) KLHL35 (ENSBMSG00010006735) RPS3 (ENSBMSG00010006696) GDPD5 (ENSBMSG00010006559) SERPINH1 (ENSBMSG00010006487) MAP6 (ENSBMSG00010006468) MOGAT2 (ENSBMSG00010006441) DGAT2 (ENSBMSG00010006424) UVRAG (ENSBMSG00010006403) WNT11 (ENSBMSG00010006371) THAP12 (ENSBMSG00010006359) Pecora ANCESTRAL SPECIES 7 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.a.a.b ENSGT01030000234582.f.a.b ENSGT00390000012877 Yarkand deer MODERN SPECIES ENSCHYG00000003273 DNAJB13 (ENSCHYG00000003279) UCP2 (ENSCHYG00000003304) ENSCHYG00000003318 UCP3 (ENSCHYG00000003329) C2CD3 (ENSCHYG00000003384) PPME1 (ENSCHYG00000003704) PGM2L1 (ENSCHYG00000003778) KCNE3 (ENSCHYG00000003907) LIPT2 (ENSCHYG00000003910) POLD3 (ENSCHYG00000003916) CHRDL2 (ENSCHYG00000003936) RNF169 (ENSCHYG00000003956) XRRA1 (ENSCHYG00000003983) ENSCHYG00000004004 NEU3 (ENSCHYG00000004022) #22 ENSCHYG00000004026 OR2AT4 (ENSCHYG00000004032) ENSCHYG00000004041 ENSCHYG00000004045 SLCO2B1 (ENSCHYG00000004067) TPBGL (ENSCHYG00000004162) ARRB1 (ENSCHYG00000004204) RPS3 (ENSCHYG00000004407) KLHL35 (ENSCHYG00000004438) GDPD5 (ENSCHYG00000004461) SERPINH1 (ENSCHYG00000004527) MAP6 (ENSCHYG00000004581) ENSCHYG00000004593 ENSCHYG00000004657 ENSCHYG00000004681 Percora_a ANCESTRAL SPECIES 6 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.a.a.a.a.b ENSGT01030000234582.e.b.g.b.a.a.b ENSGT01030000234582.e.b.g.a.a Bovidae ANCESTRAL SPECIES 6 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.a.a.a.a.b ENSGT01030000234582.e.b.g.b.a.a.b ENSGT01030000234582.e.b.g.a.a Caprinae ANCESTRAL SPECIES 6 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT01030000234582.e.b.g.b.b ENSGT01030000234582.e.b.g.b.a.b ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a ENSGT01030000234582.e.b.g.b.a.a.b Goat MODERN SPECIES 6 DNAJB13 (ENSCHIG00000014945) UCP2 (ENSCHIG00000016684) UCP3 (ENSCHIG00000021029) C2CD3 (ENSCHIG00000010366) PPME1 (ENSCHIG00000013753) P4HA3 (ENSCHIG00000021364) PGM2L1 (ENSCHIG00000025872) KCNE3 (ENSCHIG00000004672) ENSCHIG00000008399 LIPT2 (ENSCHIG00000023926) ENSCHIG00000023669 CHRDL2 (ENSCHIG00000015102) RNF169 (ENSCHIG00000006555) XRRA1 (ENSCHIG00000022337) SPCS2 (ENSCHIG00000010577) NEU3 (ENSCHIG00000025082) #22 ENSCHIG00000005983 OR2AT4 (ENSCHIG00000006169) SLCO2B1 (ENSCHIG00000008646) ARRB1 (ENSCHIG00000013620) RPS3 (ENSCHIG00000012342) KLHL35 (ENSCHIG00000024312) GDPD5 (ENSCHIG00000014683) SERPINH1 (ENSCHIG00000002757) MAP6 (ENSCHIG00000023796) ENSCHIG00000022165 ENSCHIG00000016754 ENSCHIG00000017465 ENSCHIG00000016227 ENSCHIG00000025677 ENSCHIG00000015313 Rambouillet Sheep MODERN SPECIES 6 PAAF1 (ENSOARG00020024109) DNAJB13 (ENSOARG00020024172) UCP2 (ENSOARG00020024218) UCP3 (ENSOARG00020003230) C2CD3 (ENSOARG00020003293) PPME1 (ENSOARG00020003715) P4HA3 (ENSOARG00020003763) PGM2L1 (ENSOARG00020003843) KCNE3 (ENSOARG00020003867) LIPT2 (ENSOARG00020003884) POLD3 (ENSOARG00020003908) CHRDL2 (ENSOARG00020003968) RNF169 (ENSOARG00020004047) XRRA1 (ENSOARG00020004106) SPCS2 (ENSOARG00020004400) NEU3 (ENSOARG00020004457) #22 SLCO2B1 (ENSOARG00020004500) ENSOARG00020004621 OR2AT4 (ENSOARG00020004633) ENSOARG00020004648 ENSOARG00020004670 TPBGL (ENSOARG00020004687) ARRB1 (ENSOARG00020004714) RPS3 (ENSOARG00020004797) KLHL35 (ENSOARG00020004876) GDPD5 (ENSOARG00020004944) ENSOARG00020005102 SERPINH1 (ENSOARG00020005114) MOGAT2 (ENSOARG00020005152) ENSOARG00020005200 ENSOARG00020005275 Bovinae ANCESTRAL SPECIES 26 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT01030000234582.e.b.g.b.b ENSGT01030000234582.e.b.g.b.a.b ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a ENSGT00390000007473.d ENSGT01030000234582.e.b.g.b.a.a.b Bos ANCESTRAL SPECIES 25 ENSGT00940000159524 ENSGT00940000161030 ENSGT00940000163089.b.x.b.b.d ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT01030000234582.e.b.g.b.b ENSGT01030000234582.e.b.g.b.a.b ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a ENSGT00390000007473.d ENSGT01030000234582.e.b.g.b.a.a.b Bos_a ANCESTRAL SPECIES 44 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT00970000197259 Domestic yak MODERN SPECIES 4 ENSBGRG00000004527 C2CD3 (ENSBGRG00000004150) PPME1 (ENSBGRG00000003915) P4HA3 (ENSBGRG00000003823) ENSBGRG00000003813 PGM2L1 (ENSBGRG00000003748) ENSBGRG00000003710 KCNE3 (ENSBGRG00000024658) LIPT2 (ENSBGRG00000024650) ENSBGRG00000024546 CHRDL2 (ENSBGRG00000024469) ENSBGRG00000024433 RNF169 (ENSBGRG00000024385) XRRA1 (ENSBGRG00000024307) SPCS2 (ENSBGRG00000024243) NEU3 (ENSBGRG00000024225) #22 ENSBGRG00000024218 OR2AT4 (ENSBGRG00000024199) ENSBGRG00000024185 ENSBGRG00000024166 SLCO2B1 (ENSBGRG00000023872) TPBGL (ENSBGRG00000023837) ARRB1 (ENSBGRG00000023441) RPS3 (ENSBGRG00000023214) KLHL35 (ENSBGRG00000023155) GDPD5 (ENSBGRG00000022949) SERPINH1 (ENSBGRG00000022881) ENSBGRG00000022851 ENSBGRG00000022776 ENSBGRG00000022758 ENSBGRG00000022742 Wild yak MODERN SPECIES 1503 UCP3 (ENSBMUG00000002914) C2CD3 (ENSBMUG00000003017) ENSBMUG00000003074 PPME1 (ENSBMUG00000003100) P4HA3 (ENSBMUG00000003124) ENSBMUG00000003135 PGM2L1 (ENSBMUG00000003154) KCNE3 (ENSBMUG00000003174) LIPT2 (ENSBMUG00000003209) ENSBMUG00000003228 CHRDL2 (ENSBMUG00000003270) RNF169 (ENSBMUG00000003301) XRRA1 (ENSBMUG00000003408) SPCS2 (ENSBMUG00000003427) NEU3 (ENSBMUG00000003443) #22 ENSBMUG00000003461 OR2AT4 (ENSBMUG00000003471) ENSBMUG00000003483 ENSBMUG00000003492 SLCO2B1 (ENSBMUG00000003583) ARRB1 (ENSBMUG00000003695) RPS3 (ENSBMUG00000003751) KLHL35 (ENSBMUG00000003800) GDPD5 (ENSBMUG00000003936) SERPINH1 (ENSBMUG00000004021) MAP6 (ENSBMUG00000004069) ENSBMUG00000004128 Bos_b ANCESTRAL SPECIES 40 ENSGT00940000159524 ENSGT00940000161030 ENSGT00940000163089.b.x.b.b.d ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000263806 ENSGT00940000161241 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b.h ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.b ENSGT01030000234582.e.b.g.b.a.a.a.a.b ENSGT01030000234582.e.b.g.b.a.a.b ENSGT01030000234582.e.b.g.a.b Hybrid Bos Indicus MODERN SPECIES 6 UCP3 (ENSBIXG00005027973) ENSBIXG00005028004 ENSBIXG00005028014 C2CD3 (ENSBIXG00005028267) PPME1 (ENSBIXG00005028331) P4HA3 (ENSBIXG00005004876) PGM2L1 (ENSBIXG00005028456) KCNE3 (ENSBIXG00005028481) LIPT2 (ENSBIXG00005002463) ENSBIXG00005004912 CHRDL2 (ENSBIXG00005028567) ENSBIXG00005028580 RNF169 (ENSBIXG00005028615) XRRA1 (ENSBIXG00005004977) SPCS2 (ENSBIXG00005002321) NEU3 (ENSBIXG00005028847) #22 SLCO2B1 (ENSBIXG00005028960) TPBGL (ENSBIXG00005005103) ARRB1 (ENSBIXG00005001993) RPS3 (ENSBIXG00005005177) KLHL35 (ENSBIXG00005001838) GDPD5 (ENSBIXG00005029191) SERPINH1 (ENSBIXG00005001605) MAP6 (ENSBIXG00005001586) ENSBIXG00005010753 ENSBIXG00005010772 ENSBIXG00005010874 ENSBIXG00005010894 ENSBIXG00005005811 ENSBIXG00005010939 ENSBIXG00005010950 Cow MODERN SPECIES 6 C2CD3 (ENSBTAG00000002907) C2CD3 (ENSBTAG00000054229) ENSBTAG00000049655 PPME1 (ENSBTAG00000027612) P4HA3 (ENSBTAG00000006579) ENSBTAG00000027610 PGM2L1 (ENSBTAG00000000770) KCNE3 (ENSBTAG00000011873) LIPT2 (ENSBTAG00000008227) POLD3 (ENSBTAG00000016869) CHRDL2 (ENSBTAG00000021306) RNF169 (ENSBTAG00000000727) ENSBTAG00000054207 XRRA1 (ENSBTAG00000006610) SPCS2 (ENSBTAG00000006644) NEU3 (ENSBTAG00000025931) #22 OR2AT2C (ENSBTAG00000047344) ENSBTAG00000048088 SLCO2B1 (ENSBTAG00000015596) TPBGL (ENSBTAG00000019622) ARRB1 (ENSBTAG00000020485) RPS3 (ENSBTAG00000005620) KLHL35 (ENSBTAG00000015087) GDPD5 (ENSBTAG00000031777) SERPINH1 (ENSBTAG00000001027) MAP6 (ENSBTAG00000001028) MOGAT2 (ENSBTAG00000049519) ENSBTAG00000053794 ENSBTAG00000047111 ENSBTAG00000017443 ENSBTAG00000015091 American bison MODERN SPECIES 3168 NEU3 (ENSBBBG00000022546) #22 ENSBBBG00000022551 OR2AT4 (ENSBBBG00000022555) ENSBBBG00000022561 SLCO2B1 (ENSBBBG00000005968) TPBGL (ENSBBBG00000005974) ARRB1 (ENSBBBG00000022736) RPS3 (ENSBBBG00000022815) ENSBBBG00000022826 GDPD5 (ENSBBBG00000022948) SERPINH1 (ENSBBBG00000022977) MAP6 (ENSBBBG00000023028) ENSBBBG00000023058 ENSBBBG00000023066 ENSBBBG00000023073 ENSBBBG00000023075 Siberian musk deer MODERN SPECIES 1173 DNAJB13 (ENSMMSG00000012170) UCP2 (ENSMMSG00000012130) ENSMMSG00000012118 UCP3 (ENSMMSG00000012079) C2CD3 (ENSMMSG00000011889) PPME1 (ENSMMSG00000011768) P4HA3 (ENSMMSG00000011730) PGM2L1 (ENSMMSG00000011704) KCNE3 (ENSMMSG00000011690) LIPT2 (ENSMMSG00000011677) ENSMMSG00000011605 CHRDL2 (ENSMMSG00000011519) RNF169 (ENSMMSG00000011474) XRRA1 (ENSMMSG00000011230) ENSMMSG00000011190 NEU3 (ENSMMSG00000011174) #22 OR2AT4 (ENSMMSG00000011148) ENSMMSG00000011132 SLCO2B1 (ENSMMSG00000010784) TPBGL (ENSMMSG00000010742) ARRB1 (ENSMMSG00000010638) RPS3 (ENSMMSG00000010456) KLHL35 (ENSMMSG00000010389) GDPD5 (ENSMMSG00000010257) ENSMMSG00000010185 ENSMMSG00000010133 ENSMMSG00000010080 ENSMMSG00000010044 ENSMMSG00000010002 ENSMMSG00000009931 Camelidae ANCESTRAL SPECIES 32 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT00970000197259 ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Alpaca MODERN SPECIES 1706 RNF169 (ENSVPAG00000010938) XRRA1 (ENSVPAG00000010942) SPCS2 (ENSVPAG00000010946) NEU3 (ENSVPAG00000010949) #22 Arabian camel MODERN SPECIES 1 PAAF1 (ENSCDRG00005002435) DNAJB13 (ENSCDRG00005002468) ENSCDRG00005002493 ENSCDRG00005002523 C2CD3 (ENSCDRG00005002561) PPME1 (ENSCDRG00005002613) P4HA3 (ENSCDRG00005002632) PGM2L1 (ENSCDRG00005002666) KCNE3 (ENSCDRG00005002694) LIPT2 (ENSCDRG00005002708) ENSCDRG00005002729 CHRDL2 (ENSCDRG00005002767) RNF169 (ENSCDRG00005002806) XRRA1 (ENSCDRG00005002862) SPCS2 (ENSCDRG00005002935) NEU3 (ENSCDRG00005002967) #22 OR2AT4 (ENSCDRG00005002973) ENSCDRG00005002994 SLCO2B1 (ENSCDRG00005003073) ARRB1 (ENSCDRG00005003177) ENSCDRG00005003279 KLHL35 (ENSCDRG00005003311) GDPD5 (ENSCDRG00005003371) SERPINH1 (ENSCDRG00005003481) MAP6 (ENSCDRG00005003550) MOGAT2 (ENSCDRG00005003678) ENSCDRG00005003755 DGAT2 (ENSCDRG00005003787) UVRAG (ENSCDRG00005003820) WNT11 (ENSCDRG00005003887) THAP12 (ENSCDRG00005003929) Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Carnivora ANCESTRAL SPECIES 21 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Caniformia ANCESTRAL SPECIES 17 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00940000154612.m.a.g.b ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00940000154612.m.a.g.b ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Ursidae ANCESTRAL SPECIES 15 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00940000154612.m.a.g.b ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000264679 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00950000182887.C.a.b ENSGT00390000008610.a.a ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b ENSGT00440000033232.d Ursus ANCESTRAL SPECIES 36 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01100000264679 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.ab ENSGT00940000163113 ENSGT00940000162049.`b.a ENSGT01080000257336.a.c.a ENSGT00950000182887.C.a.b ENSGT00390000008610.a.a ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Polar bear MODERN SPECIES 302 ENSUMAG00000010356 DNAJB13 (ENSUMAG00000010357) ENSUMAG00000010361 UCP3 (ENSUMAG00000010364) C2CD3 (ENSUMAG00000010411) PPME1 (ENSUMAG00000010578) ENSUMAG00000010596 P4HA3 (ENSUMAG00000010611) PGM2L1 (ENSUMAG00000010658) KCNE3 (ENSUMAG00000010667) ENSUMAG00000010676 CHRDL2 (ENSUMAG00000010688) ENSUMAG00000010704 ENSUMAG00000010705 SPCS2 (ENSUMAG00000010706) NEU3 (ENSUMAG00000010711) #22 ENSUMAG00000010715 OR2AT4 (ENSUMAG00000010718) ENSUMAG00000010723 SLCO2B1 (ENSUMAG00000010739) ARRB1 (ENSUMAG00000010806) ENSUMAG00000010808 ENSUMAG00000010819 GDPD5 (ENSUMAG00000010823) SERPINH1 (ENSUMAG00000010838) MOGAT2 (ENSUMAG00000010842) DGAT2 (ENSUMAG00000010859) UVRAG (ENSUMAG00000010891) ENSUMAG00000010943 GVQW3 (ENSUMAG00000010946) EMSY (ENSUMAG00000010950) American black bear MODERN SPECIES 6090 ENSUAMG00000012924 ENSUAMG00000012926 ENSUAMG00000012928 ENSUAMG00000012931 ENSUAMG00000012933 NEU3 (ENSUAMG00000012937) #22 Giant Panda MODERN SPECIES 18 DNAJB13 (ENSAMEG00000017254) UCP2 (ENSAMEG00000017239) UCP3 (ENSAMEG00000017226) C2CD3 (ENSAMEG00000017216) ENSAMEG00000025260 PPME1 (ENSAMEG00000017200) P4HA3 (ENSAMEG00000017190) PGM2L1 (ENSAMEG00000017168) KCNE3 (ENSAMEG00000020287) LIPT2 (ENSAMEG00000017166) ENSAMEG00000017155 CHRDL2 (ENSAMEG00000017149) RNF169 (ENSAMEG00000017148) XRRA1 (ENSAMEG00000017132) SPCS2 (ENSAMEG00000017127) NEU3 (ENSAMEG00000017126) #22 OR2AT4 (ENSAMEG00000020286) SLCO2B1 (ENSAMEG00000017088) ARRB1 (ENSAMEG00000017062) RPS3 (ENSAMEG00000017051) KLHL35 (ENSAMEG00000017048) GDPD5 (ENSAMEG00000017024) SERPINH1 (ENSAMEG00000017004) MAP6 (ENSAMEG00000016992) MOGAT2 (ENSAMEG00000016976) DGAT2 (ENSAMEG00000016958) UVRAG (ENSAMEG00000016944) WNT11 (ENSAMEG00000016932) THAP12 (ENSAMEG00000016926) GVQW3 (ENSAMEG00000020284) EMSY (ENSAMEG00000016911) Mustelinae ANCESTRAL SPECIES 25 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b ENSGT00440000033232.d American mink MODERN SPECIES 6 ENSNVIG00000021953 DNAJB13 (ENSNVIG00000021956) UCP2 (ENSNVIG00000021964) UCP3 (ENSNVIG00000021995) C2CD3 (ENSNVIG00000022016) PPME1 (ENSNVIG00000022146) P4HA3 (ENSNVIG00000022190) PGM2L1 (ENSNVIG00000022233) KCNE3 (ENSNVIG00000022255) LIPT2 (ENSNVIG00000022257) POLD3 (ENSNVIG00000022266) CRDL2 (ENSNVIG00000022284) RNF169 (ENSNVIG00000022325) XRRA1 (ENSNVIG00000022332) SPCS2 (ENSNVIG00000022377) NEU3 (ENSNVIG00000022399) #22 OR2AT4 (ENSNVIG00000022405) SLCO2B1 (ENSNVIG00000022418) TPBGL (ENSNVIG00000022489) ARRB1 (ENSNVIG00000022499) RPS3 (ENSNVIG00000022524) KLHL35 (ENSNVIG00000000027) GDPD5 (ENSNVIG00000000058) SERPINH1 (ENSNVIG00000000240) MAP6 (ENSNVIG00000000278) MOGAT2 (ENSNVIG00000000300) DGAT2 (ENSNVIG00000000310) UVRAG (ENSNVIG00000000349) WNT11 (ENSNVIG00000000391) ENSNVIG00000000416 GVQW3 (ENSNVIG00000000425) Ferret MODERN SPECIES 294 PAAF1 (ENSMPUG00000009602) DNAJB13 (ENSMPUG00000009521) UCP2 (ENSMPUG00000009517) UCP3 (ENSMPUG00000009444) C2CD3 (ENSMPUG00000009422) PPME1 (ENSMPUG00000009348) P4HA3 (ENSMPUG00000009330) PGM2L1 (ENSMPUG00000009319) KCNE3 (ENSMPUG00000019533) LIPT2 (ENSMPUG00000009304) POLD3 (ENSMPUG00000009299) CHRDL2 (ENSMPUG00000009291) RNF169 (ENSMPUG00000009279) XRRA1 (ENSMPUG00000009266) SPCS2 (ENSMPUG00000009261) NEU3 (ENSMPUG00000009248) #22 OR2AT4 (ENSMPUG00000019531) SLCO2B1 (ENSMPUG00000009234) TPBGL (ENSMPUG00000019529) ARRB1 (ENSMPUG00000009213) RPS3 (ENSMPUG00000009197) KLHL35 (ENSMPUG00000009085) GDPD5 (ENSMPUG00000009066) SERPINH1 (ENSMPUG00000009062) MAP6 (ENSMPUG00000009054) MOGAT2 (ENSMPUG00000009005) DGAT2 (ENSMPUG00000008926) UVRAG (ENSMPUG00000008808) WNT11 (ENSMPUG00000008789) THAP12 (ENSMPUG00000008784) EMSY (ENSMPUG00000008766) Canidae ANCESTRAL SPECIES 17 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00940000154612.m.a.g.b ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Canis_lupus ANCESTRAL SPECIES 21 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00940000154612.m.a.g.b ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.w ENSGT00940000163113 ENSGT00940000162049.x ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Dog MODERN SPECIES 13 PAAF1 (ENSCAFG00845007324) DNAJB13 (ENSCAFG00845007267) UCP2 (ENSCAFG00845007207) UCP3 (ENSCAFG00845007137) C2CD3 (ENSCAFG00845006752) PPME1 (ENSCAFG00845006643) P4HA3 (ENSCAFG00845006494) PGM2L1 (ENSCAFG00845006417) KCNE3 (ENSCAFG00845006390) LIPT2 (ENSCAFG00845006375) ENSCAFG00845006319 CHRDL2 (ENSCAFG00845006210) RNF169 (ENSCAFG00845006177) XRRA1 (ENSCAFG00845006118) SPCS2 (ENSCAFG00845006071) NEU3 (ENSCAFG00845006035) #22 OR2AT2 (ENSCAFG00845012453) OR2AT2B (ENSCAFG00845012435) ENSCAFG00845012420 SLCO2B1 (ENSCAFG00845012322) ENSCAFG00845012257 ARRB1 (ENSCAFG00845011997) RPS3 (ENSCAFG00845011844) KLHL35 (ENSCAFG00845011797) GDPD5 (ENSCAFG00845011562) SERPINH1 (ENSCAFG00845011365) MAP6 (ENSCAFG00845011305) MOGAT2 (ENSCAFG00845011232) DGAT2 (ENSCAFG00845011120) UVRAG (ENSCAFG00845010859) WNT11 (ENSCAFG00845010773) Dingo MODERN SPECIES 231 DNAJB13 (ENSCAFG00020002188) UCP2 (ENSCAFG00020002181) UCP3 (ENSCAFG00020002165) C2CD3 (ENSCAFG00020002084) ENSCAFG00020002068 PPME1 (ENSCAFG00020002049) P4HA3 (ENSCAFG00020001895) PGM2L1 (ENSCAFG00020001866) KCNE3 (ENSCAFG00020001859) LIPT2 (ENSCAFG00020001852) POLD3 (ENSCAFG00020001837) CHRDL2 (ENSCAFG00020001765) RNF169 (ENSCAFG00020001748) XRRA1 (ENSCAFG00020001674) SPCS2 (ENSCAFG00020001665) NEU3 (ENSCAFG00020001651) #22 ENSCAFG00020001644 OR2AT4 (ENSCAFG00020001640) ENSCAFG00020001631 SLCO2B1 (ENSCAFG00020001612) TPBGL (ENSCAFG00020001595) ARRB1 (ENSCAFG00020001583) Red fox MODERN SPECIES 81 PAAF1 (ENSVVUG00000024532) DNAJB13 (ENSVVUG00000024528) UCP2 (ENSVVUG00000024525) UCP3 (ENSVVUG00000024520) C2CD3 (ENSVVUG00000024492) PPME1 (ENSVVUG00000024480) P4HA3 (ENSVVUG00000024443) PGM2L1 (ENSVVUG00000024420) KCNE3 (ENSVVUG00000024415) LIPT2 (ENSVVUG00000024412) POLD3 (ENSVVUG00000024403) CHRDL2 (ENSVVUG00000024393) RNF169 (ENSVVUG00000024386) XRRA1 (ENSVVUG00000024378) SPCS2 (ENSVVUG00000024376) NEU3 (ENSVVUG00000024375) #22 ENSVVUG00000024373 OR2AT4 (ENSVVUG00000024372) ENSVVUG00000024368 SLCO2B1 (ENSVVUG00000024363) ARRB1 (ENSVVUG00000024357) RPS3 (ENSVVUG00000024353) KLHL35 (ENSVVUG00000024352) GDPD5 (ENSVVUG00000024349) SERPINH1 (ENSVVUG00000024343) MAP6 (ENSVVUG00000024341) MOGAT2 (ENSVVUG00000024340) DGAT2 (ENSVVUG00000024339) UVRAG (ENSVVUG00000024337) WNT11 (ENSVVUG00000024336) THAP12 (ENSVVUG00000024332) Felidae ANCESTRAL SPECIES ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Panthera ANCESTRAL SPECIES 23 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Tiger MODERN SPECIES 152 PAAF1 (ENSPTIG00000014005) DNAJB13 (ENSPTIG00000012650) UCP2 (ENSPTIG00000011528) UCP3 (ENSPTIG00000010500) C2CD3 (ENSPTIG00000006117) PPME1 (ENSPTIG00000019950) P4HA3 (ENSPTIG00000019317) ENSPTIG00000006901 PGM2L1 (ENSPTIG00000018629) KCNE3 (ENSPTIG00000006865) POLD3 (ENSPTIG00000016047) CHRDL2 (ENSPTIG00000013187) RNF169 (ENSPTIG00000012006) XRRA1 (ENSPTIG00000006459) SPCS2 (ENSPTIG00000002921) NEU3 (ENSPTIG00000019876) #22 SLCO2B1 (ENSPTIG00000017944) ARRB1 (ENSPTIG00000016095) RPS3 (ENSPTIG00000012777) ENSPTIG00000012295 GDPD5 (ENSPTIG00000008012) ENSPTIG00000007424 ENSPTIG00000007135 MOGAT2 (ENSPTIG00000005726) DGAT2 (ENSPTIG00000021220) ENSPTIG00000020523 Panthera_a ANCESTRAL SPECIES 24 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b lion MODERN SPECIES 10 DNAJB13 (ENSPLOG00000008016) UCP2 (ENSPLOG00000007959) UCP3 (ENSPLOG00000007899) C2CD3 (ENSPLOG00000007682) PPME1 (ENSPLOG00000007494) P4HA3 (ENSPLOG00000007413) PGM2L1 (ENSPLOG00000007360) ENSPLOG00000007335 KCNE3 (ENSPLOG00000007327) LIPT2 (ENSPLOG00000007304) POLD3 (ENSPLOG00000007284) CHRDL2 (ENSPLOG00000007211) RNF169 (ENSPLOG00000007163) XRRA1 (ENSPLOG00000007091) SPCS2 (ENSPLOG00000006952) NEU3 (ENSPLOG00000006924) #22 ENSPLOG00000006910 OR2AT4 (ENSPLOG00000006896) SLCO2B1 (ENSPLOG00000006678) TPBGL (ENSPLOG00000006600) ARRB1 (ENSPLOG00000006514) RPS3 (ENSPLOG00000006386) KLHL35 (ENSPLOG00000006330) GDPD5 (ENSPLOG00000006203) SERPINH1 (ENSPLOG00000006124) MAP6 (ENSPLOG00000006086) MOGAT2 (ENSPLOG00000006057) DGAT2 (ENSPLOG00000005990) UVRAG (ENSPLOG00000005912) WNT11 (ENSPLOG00000005866) THAP12 (ENSPLOG00000005843) leopard MODERN SPECIES 17 UCP2 (ENSPPRG00000005240) UCP3 (ENSPPRG00000003873) C2CD3 (ENSPPRG00000002156) PPME1 (ENSPPRG00000019088) P4HA3 (ENSPPRG00000016087) ENSPPRG00000019390 PGM2L1 (ENSPPRG00000012685) ENSPPRG00000019374 KCNE3 (ENSPPRG00000019344) LIPT2 (ENSPPRG00000012003) POLD3 (ENSPPRG00000011534) CHRDL2 (ENSPPRG00000009765) RNF169 (ENSPPRG00000008146) XRRA1 (ENSPPRG00000007628) SPCS2 (ENSPPRG00000005824) NEU3 (ENSPPRG00000004096) #22 ENSPPRG00000018979 SLCO2B1 (ENSPPRG00000002453) TPBGL (ENSPPRG00000001225) ARRB1 (ENSPPRG00000000797) RPS3 (ENSPPRG00000021200) KLHL35 (ENSPPRG00000016187) GDPD5 (ENSPPRG00000014276) SERPINH1 (ENSPPRG00000010542) ENSPPRG00000010162 MOGAT2 (ENSPPRG00000009822) DGAT2 (ENSPPRG00000009451) UVRAG (ENSPPRG00000007658) WNT11 (ENSPPRG00000006331) THAP12 (ENSPPRG00000005378) GVQW3 (ENSPPRG00000018362) Cat MODERN SPECIES 241 COA4 (ENSFCAG00000028250) PAAF1 (ENSFCAG00000026583) UCP2 (ENSFCAG00000005031) C2CD3 (ENSFCAG00000028884) PPME1 (ENSFCAG00000026344) P4HA3 (ENSFCAG00000007938) PGM2L1 (ENSFCAG00000007942) ENSFCAG00000025621 KCNE3 (ENSFCAG00000007946) LIPT2 (ENSFCAG00000005135) POLD3 (ENSFCAG00000008169) CHRDL2 (ENSFCAG00000008172) RNF169 (ENSFCAG00000043917) XRRA1 (ENSFCAG00000014638) SPCS2 (ENSFCAG00000022532) NEU3 (ENSFCAG00000033977) #22 ENSFCAG00000036568 OR2AT4 (ENSFCAG00000029673) SLCO2B1 (ENSFCAG00000011940) ARRB1 (ENSFCAG00000011941) RPS3 (ENSFCAG00000011942) KLHL35 (ENSFCAG00000012545) GDPD5 (ENSFCAG00000011943) SERPINH1 (ENSFCAG00000011944) MAP6 (ENSFCAG00000023444) MOGAT2 (ENSFCAG00000004632) DGAT2 (ENSFCAG00000040215) UVRAG (ENSFCAG00000022180) WNT11 (ENSFCAG00000025418) THAP12 (ENSFCAG00000006764) GVQW3 (ENSFCAG00000025300) Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Microchiroptera ANCESTRAL SPECIES 2 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Microbat MODERN SPECIES 1250 DNAJB13 (ENSMLUG00000012101) UCP2 (ENSMLUG00000012109) ENSMLUG00000012118 ENSMLUG00000022897 ENSMLUG00000012130 PPME1 (ENSMLUG00000012151) P4HA3 (ENSMLUG00000012162) PGM2L1 (ENSMLUG00000025308) KCNE3 (ENSMLUG00000013407) LIPT2 (ENSMLUG00000028952) ENSMLUG00000012843 CHRDL2 (ENSMLUG00000014447) RNF169 (ENSMLUG00000014455) XRRA1 (ENSMLUG00000014461) SPCS2 (ENSMLUG00000014468) NEU3 (ENSMLUG00000014473) #22 SLCO2B1 (ENSMLUG00000008962) Greater horseshoe bat MODERN SPECIES 2 DNAJB13 (ENSRFEG00010015817) Ucp2 (ENSRFEG00010015998) C2CD3 (ENSRFEG00010016160) PPME1 (ENSRFEG00010016253) P4HA3 (ENSRFEG00010016337) PGM2L1 (ENSRFEG00010016411) ENSRFEG00010016450 KCNE3 (ENSRFEG00010016472) LIPT2 (ENSRFEG00010016489) POLD3 (ENSRFEG00010016519) ENSRFEG00010016605 CHRDL2 (ENSRFEG00010016638) RNF169 (ENSRFEG00010016892) XRRA1 (ENSRFEG00010016995) SPCS2 (ENSRFEG00010017525) NEU3 (ENSRFEG00010017632) #22 ENSRFEG00010017649 ENSRFEG00010017695 ENSRFEG00010017708 ENSRFEG00010017732 SLCO2B1 (ENSRFEG00010017798) TPBGL (ENSRFEG00010018053) ARRB1 (ENSRFEG00010018085) RPS3 (ENSRFEG00010018171) KLHL35 (ENSRFEG00010018271) GDPD5 (ENSRFEG00010018359) SERPINH1 (ENSRFEG00010018606) MAP6 (ENSRFEG00010018658) MOGAT2 (ENSRFEG00010018707) DGAT2 (ENSRFEG00010018775) UVRAG (ENSRFEG00010018929) Megabat MODERN SPECIES 2450 DNAJB13 (ENSPVAG00000006662) UCP2 (ENSPVAG00000006666) UCP3 (ENSPVAG00000006667) ENSPVAG00000006668 C2CD3 (ENSPVAG00000006669) PPME1 (ENSPVAG00000006670) P4HA3 (ENSPVAG00000006673) PGM2L1 (ENSPVAG00000006674) KCNE3 (ENSPVAG00000006675) LIPT2 (ENSPVAG00000006676) POLD3 (ENSPVAG00000006677) CHRDL2 (ENSPVAG00000006678) RNF169 (ENSPVAG00000006679) XRRA1 (ENSPVAG00000006681) SPCS2 (ENSPVAG00000006682) NEU3 (ENSPVAG00000006683) #22 Equus ANCESTRAL SPECIES 15 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b ENSGT00440000033232.d Horse MODERN SPECIES 28 COA4 (ENSECAG00000022111) UCP2 (ENSECAG00000018649) UCP3 (ENSECAG00000017011) DNAJB13 (ENSECAG00000018671) C2CD3 (ENSECAG00000012038) PPME1 (ENSECAG00000010756) P4HA3 (ENSECAG00000006917) PGM2L1 (ENSECAG00000018803) KCNE3 (ENSECAG00000007379) LIPT2 (ENSECAG00000017517) POLD3 (ENSECAG00000012624) CHRDL2 (ENSECAG00000011897) RNF169 (ENSECAG00000010781) XRRA1 (ENSECAG00000007758) SPCS2 (ENSECAG00000007179) NEU3 (ENSECAG00000006601) #22 ENSECAG00000059146 TPBGL (ENSECAG00000059109) SLCO2B1 (ENSECAG00000024423) ARRB1 (ENSECAG00000017459) RPS3 (ENSECAG00000013915) KLHL35 (ENSECAG00000013664) GDPD5 (ENSECAG00000010098) SERPINH1 (ENSECAG00000004871) MAP6 (ENSECAG00000004615) MOGAT2 (ENSECAG00000025135) DGAT2 (ENSECAG00000024847) ENSECAG00000058058 ENSECAG00000018259 UVRAG (ENSECAG00000023818) WNT11 (ENSECAG00000022188) Donkey MODERN SPECIES 12 UCP2 (ENSEASG00005017923) DNAJB13 (ENSEASG00005017929) UCP3 (ENSEASG00005017916) ENSEASG00005017897 ENSEASG00005028756 PPME1 (ENSEASG00005017891) P4HA3 (ENSEASG00005017878) PGM2L1 (ENSEASG00005017865) KCNE3 (ENSEASG00005038189) LIPT2 (ENSEASG00005017860) ENSEASG00005017856 CHRDL2 (ENSEASG00005017832) RNF169 (ENSEASG00005038773) XRRA1 (ENSEASG00005017820) ENSEASG00005017816 NEU3 (ENSEASG00005017815) #22 ENSEASG00005017814 OR2AT4 (ENSEASG00005014267) ENSEASG00005036702 ENSEASG00005035225 SLCO2B1 (ENSEASG00005014263) TPBGL (ENSEASG00005025170) ARRB1 (ENSEASG00005014253) RPS3 (ENSEASG00005014248) KLHL35 (ENSEASG00005014246) GDPD5 (ENSEASG00005014243) SERPINH1 (ENSEASG00005014240) MAP6 (ENSEASG00005014238) MOGAT2 (ENSEASG00005014230) ENSEASG00005014228 UVRAG (ENSEASG00005014226) Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Tree shrew MODERN SPECIES 3417 RNF169 (ENSTBEG00000003685) XRRA1 (ENSTBEG00000003860) SPCS2 (ENSTBEG00000003943) ENSTBEG00000004107 #22 Glires ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Rodentia ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Guinea pig MODERN SPECIES 103 PAAF1 (ENSCPOG00000013297) DNAJB13 (ENSCPOG00000010693) UCP2 (ENSCPOG00000010696) UCP3 (ENSCPOG00000005180) C2CD3 (ENSCPOG00000010703) PPME1 (ENSCPOG00000003599) P4HA3 (ENSCPOG00000003601) PGM2L1 (ENSCPOG00000014068) KCNE3 (ENSCPOG00000033408) LIPT2 (ENSCPOG00000025073) ENSCPOG00000007066 CHRDL2 (ENSCPOG00000007071) RNF169 (ENSCPOG00000025687) XRRA1 (ENSCPOG00000007269) SPCS2 (ENSCPOG00000033774) NEU3 (ENSCPOG00000006422) #22 OR2AT4 (ENSCPOG00000012056) SLCO2B1 (ENSCPOG00000015052) TPBGL (ENSCPOG00000015056) ARRB1 (ENSCPOG00000000209) RPS3 (ENSCPOG00000004665) KLHL35 (ENSCPOG00000010232) GDPD5 (ENSCPOG00000010246) SERPINH1 (ENSCPOG00000022994) ENSCPOG00000031687 Hystricomorpha_b ANCESTRAL SPECIES 5 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Degu MODERN SPECIES 90 CAPN5 (ENSODEG00000005118) B3GNT6 (ENSODEG00000005108) ENSODEG00000005077 ENSODEG00000005063 ACER3 (ENSODEG00000005051) PGM2L1 (ENSODEG00000004995) KCNE3 (ENSODEG00000019113) LIPT2 (ENSODEG00000004972) ENSODEG00000019096 ENSODEG00000004965 POLD3 (ENSODEG00000004735) CHRDL2 (ENSODEG00000004877) RNF169 (ENSODEG00000004854) XRRA1 (ENSODEG00000004727) SPCS2 (ENSODEG00000004684) NEU3 (ENSODEG00000004614) #22 ENSODEG00000019165 ENSODEG00000004518 OR2AT4 (ENSODEG00000004509) SLCO2B1 (ENSODEG00000004779) TPBGL (ENSODEG00000004759) ARRB1 (ENSODEG00000004633) ENSODEG00000004564 KLHL35 (ENSODEG00000004522) ENSODEG00000004513 SERPINH1 (ENSODEG00000004317) ENSODEG00000004327 MOGAT2 (ENSODEG00000004302) DGAT2 (ENSODEG00000004293) UVRAG (ENSODEG00000004147) WNT11 (ENSODEG00000003887) Long-tailed chinchilla MODERN SPECIES 121 PAAF1 (ENSCLAG00000013956) DNAJB13 (ENSCLAG00000015889) UCP2 (ENSCLAG00000014473) UCP3 (ENSCLAG00000016512) C2CD3 (ENSCLAG00000015900) PPME1 (ENSCLAG00000016482) P4HA3 (ENSCLAG00000016260) PGM2L1 (ENSCLAG00000015758) KCNE3 (ENSCLAG00000016222) LIPT2 (ENSCLAG00000016419) ENSCLAG00000014255 CHRDL2 (ENSCLAG00000016930) RNF169 (ENSCLAG00000015974) XRRA1 (ENSCLAG00000014397) SPCS2 (ENSCLAG00000016410) NEU3 (ENSCLAG00000015476) #22 SLCO2B1 (ENSCLAG00000013902) TPBGL (ENSCLAG00000016335) ARRB1 (ENSCLAG00000014486) RPS3 (ENSCLAG00000013819) KLHL35 (ENSCLAG00000015297) GDPD5 (ENSCLAG00000015415) SERPINH1 (ENSCLAG00000013718) ENSCLAG00000015204 DGAT2 (ENSCLAG00000015138) UVRAG (ENSCLAG00000016075) WNT11 (ENSCLAG00000014333) THAP12 (ENSCLAG00000014847) EMSY (ENSCLAG00000015699) LRRC32 (ENSCLAG00000016535) ENSCLAG00000014932 Naked mole-rat female MODERN SPECIES 24 UCP3 (ENSHGLG00000003428) C2CD3 (ENSHGLG00000011779) PPME1 (ENSHGLG00000003747) P4HA3 (ENSHGLG00000003386) PGM2L1 (ENSHGLG00000010209) KCNE3 (ENSHGLG00000037843) LIPT2 (ENSHGLG00000008316) POLD3 (ENSHGLG00000012230) ENSHGLG00000021193 CHRDL2 (ENSHGLG00000013117) RNF169 (ENSHGLG00000047439) ENSHGLG00000038136 ENSHGLG00000004932 SPCS2 (ENSHGLG00000044953) ENSHGLG00000042609 NEU3 (ENSHGLG00000018397) #22 ENSHGLG00000032512 ENSHGLG00000039039 ENSHGLG00000033098 OR2AT4 (ENSHGLG00000049134) SLCO2B1 (ENSHGLG00000015264) TPBGL (ENSHGLG00000021318) ARRB1 (ENSHGLG00000015558) RPS3 (ENSHGLG00000019339) KLHL35 (ENSHGLG00000004947) GDPD5 (ENSHGLG00000009912) SERPINH1 (ENSHGLG00000007288) MAP6 (ENSHGLG00000005485) ENSHGLG00000043050 MOGAT2 (ENSHGLG00000005337) DGAT2 (ENSHGLG00000003971) Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Marmotini ANCESTRAL SPECIES 28 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00390000009895.i.b.a ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Alpin marmot MODERN SPECIES 3 DNAJB13 (ENSMMMG00000010540) UCP2 (ENSMMMG00000010534) UCP3 (ENSMMMG00000010518) C2CD3 (ENSMMMG00000010449) PPME1 (ENSMMMG00000010421) P4HA3 (ENSMMMG00000010398) ENSMMMG00000010391 PGM2L1 (ENSMMMG00000010377) KCNE3 (ENSMMMG00000010356) ENSMMMG00000010334 CHRDL2 (ENSMMMG00000010297) ENSMMMG00000010292 RNF169 (ENSMMMG00000010273) XRRA1 (ENSMMMG00000010212) SPCS2 (ENSMMMG00000010185) NEU3 (ENSMMMG00000010144) #22 SLCO2B1 (ENSMMMG00000010020) ARRB1 (ENSMMMG00000009891) RPS3 (ENSMMMG00000009823) GDPD5 (ENSMMMG00000009761) SERPINH1 (ENSMMMG00000009745) MAP6 (ENSMMMG00000009732) MOGAT2 (ENSMMMG00000009708) DGAT2 (ENSMMMG00000009694) UVRAG (ENSMMMG00000009669) WNT11 (ENSMMMG00000009631) GVQW3 (ENSMMMG00000009582) EMSY (ENSMMMG00000009455) LRRC32 (ENSMMMG00000009408) ENSMMMG00000009326 TSKU (ENSMMMG00000009316) Marmotini_b ANCESTRAL SPECIES 13 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00390000009895.i.b.a ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Squirrel MODERN SPECIES 98 DNAJB13 (ENSSTOG00000010709) UCP2 (ENSSTOG00000010715) UCP3 (ENSSTOG00000004880) C2CD3 (ENSSTOG00000004903) PPME1 (ENSSTOG00000007881) P4HA3 (ENSSTOG00000007908) PGM2L1 (ENSSTOG00000012379) KCNE3 (ENSSTOG00000012391) LIPT2 (ENSSTOG00000026720) POLD3 (ENSSTOG00000000455) CHRDL2 (ENSSTOG00000000457) RNF169 (ENSSTOG00000000462) ENSSTOG00000034261 XRRA1 (ENSSTOG00000000466) SPCS2 (ENSSTOG00000012647) NEU3 (ENSSTOG00000012649) #22 ENSSTOG00000020894 OR2AT4 (ENSSTOG00000030885) SLCO2B1 (ENSSTOG00000012655) TPBGL (ENSSTOG00000027127) ARRB1 (ENSSTOG00000004545) ENSSTOG00000028813 KLHL35 (ENSSTOG00000027931) GDPD5 (ENSSTOG00000004596) SERPINH1 (ENSSTOG00000027738) ENSSTOG00000015949 ENSSTOG00000024696 MOGAT2 (ENSSTOG00000012010) DGAT2 (ENSSTOG00000012018) UVRAG (ENSSTOG00000016316) WNT11 (ENSSTOG00000029064) Rodentia_B ANCESTRAL SPECIES 33 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Myomorpha ANCESTRAL SPECIES 13 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Muroidea ANCESTRAL SPECIES 12 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Muroidea_A ANCESTRAL SPECIES ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Cricetidae ANCESTRAL SPECIES 1 ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877.d ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Cricetinae ANCESTRAL SPECIES 15 ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.g ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877.d ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Golden Hamster MODERN SPECIES 660 Coa4 (ENSMAUG00000018585) Dnajb13 (ENSMAUG00000007369) Ucp2 (ENSMAUG00000020681) Ucp3 (ENSMAUG00000006845) C2cd3 (ENSMAUG00000002400) Ppme1 (ENSMAUG00000010412) P4ha3 (ENSMAUG00000018103) Pgm2l1 (ENSMAUG00000017167) Kcne3 (ENSMAUG00000011451) Lipt2 (ENSMAUG00000019457) ENSMAUG00000014499 Chrdl2 (ENSMAUG00000017187) Rnf169 (ENSMAUG00000014501) Xrra1 (ENSMAUG00000021020) Spcs2 (ENSMAUG00000011785) Neu3 (ENSMAUG00000021349) #22 Or2at1 (ENSMAUG00000001599) ENSMAUG00000017960 Tpbgl (ENSMAUG00000008440) Arrb1 (ENSMAUG00000021854) ENSMAUG00000012031 Klhl35 (ENSMAUG00000021872) ENSMAUG00000015100 Serpinh1 (ENSMAUG00000019515) Map6 (ENSMAUG00000011744) Mogat2 (ENSMAUG00000012718) Dgat2 (ENSMAUG00000009895) Uvrag (ENSMAUG00000022039) Wnt11 (ENSMAUG00000008427) Thap12 (ENSMAUG00000000897) ENSMAUG00000013228 Chinese hamster chok1gshd MODERN SPECIES 101 ENSCGRG00001005081 Coa4 (ENSCGRG00001011670) Dnajb13 (ENSCGRG00001023569) Ucp2 (ENSCGRG00001005610) Ucp3 (ENSCGRG00001021497) C2cd3 (ENSCGRG00001023764) Ppme1 (ENSCGRG00001006185) P4ha3 (ENSCGRG00001020549) Pgm2l1 (ENSCGRG00001022200) Kcne3 (ENSCGRG00001006190) Lipt2 (ENSCGRG00001003966) Pold3 (ENSCGRG00001024887) Chrdl2 (ENSCGRG00001017085) Xrra1 (ENSCGRG00001021284) ENSCGRG00001018251 Neu3 (ENSCGRG00001022920) #22 ENSCGRG00001009618 ENSCGRG00001008790 Or2at4 (ENSCGRG00001009746) Slco2b1 (ENSCGRG00001015456) Tpbgl (ENSCGRG00001007068) Arrb1 (ENSCGRG00001007148) ENSCGRG00001013667 Klhl35 (ENSCGRG00001005839) Gdpd5 (ENSCGRG00001018824) Serpinh1 (ENSCGRG00001024167) Map6 (ENSCGRG00001012636) Mogat2 (ENSCGRG00001004764) Dgat2 (ENSCGRG00001020895) Uvrag (ENSCGRG00001006874) Wnt11 (ENSCGRG00001022788) Cricetidae_B ANCESTRAL SPECIES 26 ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877.d ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Prairie vole MODERN SPECIES 9 Coa4 (ENSMOCG00000017462) Dnajb13 (ENSMOCG00000017952) Ucp2 (ENSMOCG00000018146) Ucp3 (ENSMOCG00000020776) C2cd3 (ENSMOCG00000019104) Ppme1 (ENSMOCG00000008664) P4ha3 (ENSMOCG00000019829) Pgm2l1 (ENSMOCG00000003706) Kcne3 (ENSMOCG00000003845) Lipt2 (ENSMOCG00000017385) Pold3 (ENSMOCG00000018619) Chrdl2 (ENSMOCG00000010273) Rnf169 (ENSMOCG00000005688) Xrra1 (ENSMOCG00000008479) Spcs2 (ENSMOCG00000013765) Neu3 (ENSMOCG00000015363) #22 Or2at1 (ENSMOCG00000008347) Or2at4 (ENSMOCG00000007737) Slco2b1 (ENSMOCG00000022164) Tpbgl (ENSMOCG00000009503) Arrb1 (ENSMOCG00000013364) Rps3 (ENSMOCG00000007699) Klhl35 (ENSMOCG00000012414) ENSMOCG00000014147 Serpinh1 (ENSMOCG00000015514) Map6 (ENSMOCG00000021641) Mogat2 (ENSMOCG00000007716) Dgat2 (ENSMOCG00000012378) Uvrag (ENSMOCG00000016758) Wnt11 (ENSMOCG00000021029) Thap12 (ENSMOCG00000021908) Northern American deer mouse MODERN SPECIES Dnajb13 (ENSPEMG00000011854) Ucp2 (ENSPEMG00000022828) Ucp3 (ENSPEMG00000023921) C2cd3 (ENSPEMG00000020833) Ppme1 (ENSPEMG00000022717) P4ha3 (ENSPEMG00000023743) ENSPEMG00000021679 Pgm2l1 (ENSPEMG00000021465) Kcne3 (ENSPEMG00000024743) Lipt2 (ENSPEMG00000009699) Pold3 (ENSPEMG00000016686) Chrdl2 (ENSPEMG00000000436) Rnf169 (ENSPEMG00000009722) Xrra1 (ENSPEMG00000022936) Spcs2 (ENSPEMG00000021621) Neu3 (ENSPEMG00000022579) #22 Or2at1 (ENSPEMG00000001658) Or2at4 (ENSPEMG00000023224) Slco2b1 (ENSPEMG00000022027) Arrb1 (ENSPEMG00000024170) ENSPEMG00000027335 Rps3 (ENSPEMG00000021741) Klhl35 (ENSPEMG00000022958) Gdpd5 (ENSPEMG00000021717) Serpinh1 (ENSPEMG00000022342) Map6 (ENSPEMG00000007984) Mogat2 (ENSPEMG00000023232) Dgat2 (ENSPEMG00000021889) Uvrag (ENSPEMG00000028043) Wnt11 (ENSPEMG00000021569) Thap12 (ENSPEMG00000013204) Murinae ANCESTRAL SPECIES ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Mus ANCESTRAL SPECIES ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Mus_A ANCESTRAL SPECIES 1 ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Mus_B ANCESTRAL SPECIES ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Mus_C ANCESTRAL SPECIES 13 ENSGT00390000008503 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01070000253969 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.t Steppe mouse MODERN SPECIES 3349 Ucp2 (ENSMSIG00000027973) Ucp3 (ENSMSIG00000027961) C2cd3 (ENSMSIG00000027851) Ppme1 (ENSMSIG00000027833) P4ha3 (ENSMSIG00000027826) ENSMSIG00000027824 Pgm2l1 (ENSMSIG00000027814) Kcne3 (ENSMSIG00000027746) Lipt2 (ENSMSIG00000027742) Pold3 (ENSMSIG00000027730) ENSMSIG00000027727 Chrdl2 (ENSMSIG00000027712) Rnf169 (ENSMSIG00000027708) Xrra1 (ENSMSIG00000027684) Spcs2 (ENSMSIG00000027625) Neu3 (ENSMSIG00000027608) #22 ENSMSIG00000027598 ENSMSIG00000027596 Or2at1 (ENSMSIG00000027584) Or2at4 (ENSMSIG00000027555) Slco2b1 (ENSMSIG00000027516) Tpbgl (ENSMSIG00000027507) ENSMSIG00000027402 Rps3 (ENSMSIG00000027343) Klhl35 (ENSMSIG00000027326) Gdpd5 (ENSMSIG00000027274) Serpinh1 (ENSMSIG00000027236) Map6 (ENSMSIG00000027203) ENSMSIG00000027198 Mogat2 (ENSMSIG00000027187) Dgat2 (ENSMSIG00000027153) spretus MODERN SPECIES 16 Coa4 (MGP_SPRETEiJ_G0031160) Dnajb13 (MGP_SPRETEiJ_G0031159) Ucp2 (MGP_SPRETEiJ_G0031158) Ucp3 (MGP_SPRETEiJ_G0031157) C2cd3 (MGP_SPRETEiJ_G0031156) Ppme1 (MGP_SPRETEiJ_G0031155) P4ha3 (MGP_SPRETEiJ_G0031154) Pgm2l1 (MGP_SPRETEiJ_G0031153) Kcne3 (MGP_SPRETEiJ_G0031152) Lipt2 (MGP_SPRETEiJ_G0031151) Pold3 (MGP_SPRETEiJ_G0031150) Chrdl2 (MGP_SPRETEiJ_G0031149) Rnf169 (MGP_SPRETEiJ_G0031148) Xrra1 (MGP_SPRETEiJ_G0031147) Spcs2 (MGP_SPRETEiJ_G0031146) Neu3 (MGP_SPRETEiJ_G0031145) #22 MGP_SPRETEiJ_G0031144 MGP_SPRETEiJ_G0031143 Slco2b1 (MGP_SPRETEiJ_G0031142) Tpbgl (MGP_SPRETEiJ_G0031141) Arrb1 (MGP_SPRETEiJ_G0031140) Rps3 (MGP_SPRETEiJ_G0031139) Klhl35 (MGP_SPRETEiJ_G0031138) Gdpd5 (MGP_SPRETEiJ_G0031137) Serpinh1 (MGP_SPRETEiJ_G0031136) Map6 (MGP_SPRETEiJ_G0031135) Mogat2 (MGP_SPRETEiJ_G0031134) Dgat2 (MGP_SPRETEiJ_G0031133) Uvrag (MGP_SPRETEiJ_G0031132) Wnt11 (MGP_SPRETEiJ_G0031131) MGP_SPRETEiJ_G0031130 Mouse MODERN SPECIES 16 Coa4 (ENSMUSG00000044881) Dnajb13 (ENSMUSG00000030708) Ucp2 (ENSMUSG00000033685) Ucp3 (ENSMUSG00000032942) C2cd3 (ENSMUSG00000047248) Ppme1 (ENSMUSG00000030718) P4ha3 (ENSMUSG00000051048) Pgm2l1 (ENSMUSG00000030729) Kcne3 (ENSMUSG00000035165) Lipt2 (ENSMUSG00000030725) Pold3 (ENSMUSG00000030726) Chrdl2 (ENSMUSG00000030732) Rnf169 (ENSMUSG00000058761) Xrra1 (ENSMUSG00000035211) Spcs2 (ENSMUSG00000035227) Neu3 (ENSMUSG00000035239) #22 Or2at1 (ENSMUSG00000073997) Or2at4 (ENSMUSG00000073998) Slco2b1 (ENSMUSG00000030737) Tpbgl (ENSMUSG00000096606) Arrb1 (ENSMUSG00000018909) Rps3 (ENSMUSG00000030744) Klhl35 (ENSMUSG00000035298) Gdpd5 (ENSMUSG00000035314) Serpinh1 (ENSMUSG00000070436) Map6 (ENSMUSG00000055407) Mogat2 (ENSMUSG00000052396) Dgat2 (ENSMUSG00000030747) Uvrag (ENSMUSG00000035354) Wnt11 (ENSMUSG00000015957) Thap12 (ENSMUSG00000030753) Shrew mouse MODERN SPECIES Coa4 (MGP_PahariEiJ_G0013271) Dnajb13 (MGP_PahariEiJ_G0013270) Ucp2 (MGP_PahariEiJ_G0013269) Ucp3 (MGP_PahariEiJ_G0013268) C2cd3 (MGP_PahariEiJ_G0013267) Ppme1 (MGP_PahariEiJ_G0013266) P4ha3 (MGP_PahariEiJ_G0013265) Pgm2l1 (MGP_PahariEiJ_G0013264) Kcne3 (MGP_PahariEiJ_G0013263) Lipt2 (MGP_PahariEiJ_G0013262) Pold3 (MGP_PahariEiJ_G0013261) Chrdl2 (MGP_PahariEiJ_G0013260) Rnf169 (MGP_PahariEiJ_G0013259) Xrra1 (MGP_PahariEiJ_G0013258) Spcs2 (MGP_PahariEiJ_G0013257) Neu3 (MGP_PahariEiJ_G0013256) #22 MGP_PahariEiJ_G0013255 Or2at4 (MGP_PahariEiJ_G0013254) Slco2b1 (MGP_PahariEiJ_G0013253) Tpbgl (MGP_PahariEiJ_G0013252) Arrb1 (MGP_PahariEiJ_G0013251) Rps3 (MGP_PahariEiJ_G0013250) Klhl35 (MGP_PahariEiJ_G0013249) Gdpd5 (MGP_PahariEiJ_G0013248) Serpinh1 (MGP_PahariEiJ_G0013247) Map6 (MGP_PahariEiJ_G0013246) Mogat2 (MGP_PahariEiJ_G0013245) Dgat2 (MGP_PahariEiJ_G0013244) Uvrag (MGP_PahariEiJ_G0013243) Wnt11 (MGP_PahariEiJ_G0013242) Thap12 (MGP_PahariEiJ_G0013241) Rat MODERN SPECIES Dnajb13 (ENSRNOG00000017975) Ucp2 (ENSRNOG00000017854) Ucp3 (ENSRNOG00000017716) C2cd3 (ENSRNOG00000017608) Ppme1 (ENSRNOG00000017227) P4ha3 (ENSRNOG00000017118) Pgm2l1 (ENSRNOG00000017079) Lipt2 (ENSRNOG00000016906) Pold3 (ENSRNOG00000018411) Chrdl2 (ENSRNOG00000018394) Rnf169 (ENSRNOG00000026408) Xrra1 (ENSRNOG00000026503) Spcs2 (ENSRNOG00000018164) AABR07004876.1 (ENSRNOG00000018083) Or2at1 (ENSRNOG00000018078) Neu3 (ENSRNOG00000018106) #22 Olr36 (ENSRNOG00000068594) Olr35 (ENSRNOG00000030788) Slco2b1 (ENSRNOG00000017976) Tpbgl (ENSRNOG00000017922) Arrb1 (ENSRNOG00000030404) Rps3 (ENSRNOG00000017418) Klhl35 (ENSRNOG00000017365) Gdpd5 (ENSRNOG00000036859) Serpinh1 (ENSRNOG00000016831) Map6 (ENSRNOG00000027204) Mogat2 (ENSRNOG00000027228) Dgat2 (ENSRNOG00000016573) Uvrag (ENSRNOG00000016206) RGD1561870 (ENSRNOG00000042782) Wnt11 (ENSRNOG00000015982) Upper Galilee mountains blind mole rat MODERN SPECIES 1254 ENSNGAG00000013165 Chrdl2 (ENSNGAG00000000179) Rnf169 (ENSNGAG00000019560) Xrra1 (ENSNGAG00000012048) Spcs2 (ENSNGAG00000013220) Neu3 (ENSNGAG00000011806) #22 ENSNGAG00000016993 ENSNGAG00000016422 Slco2b1 (ENSNGAG00000001998) Tpbgl (ENSNGAG00000000289) Arrb1 (ENSNGAG00000010423) Rps3 (ENSNGAG00000015514) Klhl35 (ENSNGAG00000009818) ENSNGAG00000013714 Serpinh1 (ENSNGAG00000015539) Map6 (ENSNGAG00000013077) Mogat2 (ENSNGAG00000015554) Dgat2 (ENSNGAG00000012414) Uvrag (ENSNGAG00000018199) Wnt11 (ENSNGAG00000013425) ENSNGAG00000013016 Lesser Egyptian jerboa MODERN SPECIES 59 Dnajb13 (ENSJJAG00000002723) Ucp2 (ENSJJAG00000019788) Ucp3 (ENSJJAG00000015536) C2cd3 (ENSJJAG00000015746) Ppme1 (ENSJJAG00000007410) P4ha3 (ENSJJAG00000020207) Pgm2l1 (ENSJJAG00000022120) Kcne3 (ENSJJAG00000020890) ENSJJAG00000023707 Lipt2 (ENSJJAG00000017301) Pold3 (ENSJJAG00000017773) Chrdl2 (ENSJJAG00000016161) Rnf169 (ENSJJAG00000011953) Xrra1 (ENSJJAG00000008569) Spcs2 (ENSJJAG00000021065) Neu3 (ENSJJAG00000017819) #22 ENSJJAG00000021660 Tpbgl (ENSJJAG00000010465) Arrb1 (ENSJJAG00000004361) Rps3 (ENSJJAG00000018981) Klhl35 (ENSJJAG00000013370) ENSJJAG00000007355 Serpinh1 (ENSJJAG00000023536) Map6 (ENSJJAG00000014715) Mogat2 (ENSJJAG00000023310) Dgat2 (ENSJJAG00000019379) Uvrag (ENSJJAG00000004695) Wnt11 (ENSJJAG00000014979) ENSJJAG00000013737 Emsy (ENSJJAG00000022026) Lrrc32 (ENSJJAG00000000443) Kangaroo rat MODERN SPECIES 341 ENSDORG00000000645 Dnajb13 (ENSDORG00000010103) Ucp2 (ENSDORG00000010105) Ucp3 (ENSDORG00000003664) C2cd3 (ENSDORG00000011059) Ppme1 (ENSDORG00000011061) P4ha3 (ENSDORG00000011067) Pgm2l1 (ENSDORG00000001675) Kcne3 (ENSDORG00000028654) Lipt2 (ENSDORG00000015519) ENSDORG00000008335 Chrdl2 (ENSDORG00000005504) Rnf169 (ENSDORG00000009674) Xrra1 (ENSDORG00000009675) Spcs2 (ENSDORG00000009679) Neu3 (ENSDORG00000023952) #22 Or2at1 (ENSDORG00000002748) Or2at4 (ENSDORG00000023720) ENSDORG00000006523 Arrb1 (ENSDORG00000004398) Rps3 (ENSDORG00000002974) Klhl35 (ENSDORG00000002975) ENSDORG00000002976 ENSDORG00000002978 ENSDORG00000025798 Dgat2 (ENSDORG00000015911) Uvrag (ENSDORG00000015912) Wnt11 (ENSDORG00000005892) ENSDORG00000030214 Emsy (ENSDORG00000008129) Lrrc32 (ENSDORG00000027997) Lagomorpha ANCESTRAL SPECIES 5 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.h ENSGT00940000156163.g.b ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Pika MODERN SPECIES 1257 ENSOPRG00000013871 RNF169 (ENSOPRG00000013894) XRRA1 (ENSOPRG00000013915) SPCS2 (ENSOPRG00000013938) ENSOPRG00000013950 #22 Rabbit MODERN SPECIES DNAJB13 (ENSOCUG00000012583) UCP2 (ENSOCUG00000012591) UCP3 (ENSOCUG00000034991) ENSOCUG00000034963 C2CD3 (ENSOCUG00000004011) ENSOCUG00000026735 P4HA3 (ENSOCUG00000010111) PGM2L1 (ENSOCUG00000005709) ENSOCUG00000016447 POLD3 (ENSOCUG00000002523) CHRDL2 (ENSOCUG00000022782) RNF169 (ENSOCUG00000001789) ENSOCUG00000026028 XRRA1 (ENSOCUG00000012514) ENSOCUG00000038071 NEU3 (ENSOCUG00000012531) #22 ENSOCUG00000036432 OR2AT4 (ENSOCUG00000027488) SLCO2B1 (ENSOCUG00000014225) TPBGL (ENSOCUG00000014231) ARRB1 (ENSOCUG00000026291) RPS3 (ENSOCUG00000022412) KLHL35 (ENSOCUG00000012395) GDPD5 (ENSOCUG00000026378) ENSOCUG00000032044 ENSOCUG00000026029 ENSOCUG00000003302 MOGAT2 (ENSOCUG00000014215) ENSOCUG00000033370 UVRAG (ENSOCUG00000014223) WNT11 (ENSOCUG00000001726) Primates ANCESTRAL SPECIES ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.m ENSGT00940000163113 ENSGT00940000162049.n ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.m ENSGT00940000163113 ENSGT00940000162049.n ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Lemuriformes_a ANCESTRAL SPECIES 50 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.m ENSGT00940000163113 ENSGT00940000162049.n ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Greater bamboo lemur MODERN SPECIES 276 DNAJB13 (ENSPSMG00000003602) UCP2 (ENSPSMG00000003586) UCP3 (ENSPSMG00000003575) C2CD3 (ENSPSMG00000003561) PPME1 (ENSPSMG00000003532) P4HA3 (ENSPSMG00000003508) PGM2L1 (ENSPSMG00000003486) KCNE3 (ENSPSMG00000003468) LIPT2 (ENSPSMG00000003465) POLD3 (ENSPSMG00000003441) CHRDL2 (ENSPSMG00000003418) RNF169 (ENSPSMG00000003387) XRRA1 (ENSPSMG00000003365) SPCS2 (ENSPSMG00000003324) NEU3 (ENSPSMG00000003293) #22 ENSPSMG00000003281 OR2AT4 (ENSPSMG00000003274) ENSPSMG00000003266 SLCO2B1 (ENSPSMG00000003254) TPBGL (ENSPSMG00000003242) ARRB1 (ENSPSMG00000003120) ENSPSMG00000002960 KLHL35 (ENSPSMG00000002917) GDPD5 (ENSPSMG00000002722) SERPINH1 (ENSPSMG00000002607) Coquerels sifaka MODERN SPECIES 338 PAAF1 (ENSPCOG00000017138) DNAJB13 (ENSPCOG00000025099) UCP2 (ENSPCOG00000027332) UCP3 (ENSPCOG00000018463) C2CD3 (ENSPCOG00000017962) PPME1 (ENSPCOG00000012571) P4HA3 (ENSPCOG00000010138) PGM2L1 (ENSPCOG00000026248) LIPT2 (ENSPCOG00000018043) POLD3 (ENSPCOG00000024555) ENSPCOG00000020966 CHRDL2 (ENSPCOG00000012970) RNF169 (ENSPCOG00000016721) XRRA1 (ENSPCOG00000020432) ENSPCOG00000017986 NEU3 (ENSPCOG00000014477) #22 ENSPCOG00000026765 ENSPCOG00000004225 ENSPCOG00000026342 SLCO2B1 (ENSPCOG00000026296) ARRB1 (ENSPCOG00000020960) RPS3 (ENSPCOG00000028750) KLHL35 (ENSPCOG00000012453) GDPD5 (ENSPCOG00000023523) SERPINH1 (ENSPCOG00000016388) MAP6 (ENSPCOG00000028415) MOGAT2 (ENSPCOG00000017739) DGAT2 (ENSPCOG00000019069) UVRAG (ENSPCOG00000020635) WNT11 (ENSPCOG00000014058) ENSPCOG00000027615 Mouse lemur MODERN SPECIES 27 UCP2 (ENSMICG00000012689) ENSMICG00000037420 UCP3 (ENSMICG00000012710) C2CD3 (ENSMICG00000012725) ENSMICG00000006164 ENSMICG00000031367 PPME1 (ENSMICG00000002244) P4HA3 (ENSMICG00000002249) ENSMICG00000002256 LIPT2 (ENSMICG00000045741) POLD3 (ENSMICG00000011102) CHRDL2 (ENSMICG00000011134) RNF169 (ENSMICG00000046917) XRRA1 (ENSMICG00000027081) ENSMICG00000011153 NEU3 (ENSMICG00000046723) #22 ENSMICG00000029787 ENSMICG00000035272 ENSMICG00000032041 ENSMICG00000038601 SLCO2B1 (ENSMICG00000011163) ARRB1 (ENSMICG00000011177) RPS3 (ENSMICG00000030910) KLHL35 (ENSMICG00000045018) GDPD5 (ENSMICG00000011193) SERPINH1 (ENSMICG00000015249) MAP6 (ENSMICG00000015256) MOGAT2 (ENSMICG00000015272) DGAT2 (ENSMICG00000015277) UVRAG (ENSMICG00000015281) WNT11 (ENSMICG00000015306) Bushbaby MODERN SPECIES 116 PAAF1 (ENSOGAG00000004775) DNAJB13 (ENSOGAG00000024128) UCP2 (ENSOGAG00000001700) UCP3 (ENSOGAG00000002906) C2CD3 (ENSOGAG00000001704) PPME1 (ENSOGAG00000001708) P4HA3 (ENSOGAG00000001712) PGM2L1 (ENSOGAG00000008333) KCNE3 (ENSOGAG00000032594) LIPT2 (ENSOGAG00000015602) POLD3 (ENSOGAG00000015605) CHRDL2 (ENSOGAG00000015608) RNF169 (ENSOGAG00000015611) XRRA1 (ENSOGAG00000015617) SPCS2 (ENSOGAG00000015621) NEU3 (ENSOGAG00000015623) #22 ENSOGAG00000026432 OR2AT4 (ENSOGAG00000024992) ENSOGAG00000034601 ENSOGAG00000030028 ENSOGAG00000002927 SLCO2B1 (ENSOGAG00000011545) ARRB1 (ENSOGAG00000011549) RPS3 (ENSOGAG00000005318) KLHL35 (ENSOGAG00000005323) GDPD5 (ENSOGAG00000027265) SERPINH1 (ENSOGAG00000032244) MAP6 (ENSOGAG00000005329) MOGAT2 (ENSOGAG00000000329) DGAT2 (ENSOGAG00000000330) UVRAG (ENSOGAG00000025371) Haplorrhini ANCESTRAL SPECIES ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Simiiformes ANCESTRAL SPECIES ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.a.a ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Hominoidea ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.b ENSGT00950000182944.A #22 ENSGT00940000162049.q ENSGT00940000163113 ENSGT00940000162049.r ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 Hominidae ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.b ENSGT00950000182944.A #22 ENSGT00940000162049.q ENSGT00940000163113 ENSGT00940000162049.r ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.b ENSGT00950000182944.A #22 ENSGT00940000162049.q ENSGT00940000163113 ENSGT00940000162049.r ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Gorilla MODERN SPECIES 2 ENSGGOG00000014071 DNAJB13 (ENSGGOG00000015952) UCP2 (ENSGGOG00000003854) UCP3 (ENSGGOG00000000344) C2CD3 (ENSGGOG00000000345) PPME1 (ENSGGOG00000000347) P4HA3 (ENSGGOG00000007853) PGM2L1 (ENSGGOG00000007865) KCNE3 (ENSGGOG00000041355) ENSGGOG00000005892 POLD3 (ENSGGOG00000012878) CHRDL2 (ENSGGOG00000012629) RNF169 (ENSGGOG00000014493) XRRA1 (ENSGGOG00000014505) SPCS2 (ENSGGOG00000014500) NEU3 (ENSGGOG00000014507) #22 OR2AT4 (ENSGGOG00000023922) SLCO2B1 (ENSGGOG00000007327) ARRB1 (ENSGGOG00000009699) RPS3 (ENSGGOG00000006519) KLHL35 (ENSGGOG00000015839) GDPD5 (ENSGGOG00000015848) SERPINH1 (ENSGGOG00000005397) MAP6 (ENSGGOG00000005400) DGAT2 (ENSGGOG00000002910) UVRAG (ENSGGOG00000002911) WNT11 (ENSGGOG00000015024) THAP12 (ENSGGOG00000006152) GVQW3 (ENSGGOG00000027994) EMSY (ENSGGOG00000012926) LRRC32 (ENSGGOG00000001727) Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.b ENSGT00950000182944.A #22 ENSGT00940000162049.q ENSGT00940000163113 ENSGT00940000162049.r ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Pan ANCESTRAL SPECIES 1 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.b ENSGT00950000182944.A #22 ENSGT00940000162049.q ENSGT00940000163113 ENSGT00940000162049.r ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Bonobo MODERN SPECIES 2 DNAJB13 (ENSPPAG00000035553) UCP2 (ENSPPAG00000005846) UCP3 (ENSPPAG00000043137) ENSPPAG00000042813 PPME1 (ENSPPAG00000036326) P4HA3 (ENSPPAG00000041975) PGM2L1 (ENSPPAG00000029213) KCNE3 (ENSPPAG00000022031) LIPT2 (ENSPPAG00000034746) POLD3 (ENSPPAG00000042261) CHRDL2 (ENSPPAG00000028622) RNF169 (ENSPPAG00000020912) XRRA1 (ENSPPAG00000041615) ENSPPAG00000043856 SPCS2 (ENSPPAG00000030175) NEU3 (ENSPPAG00000040988) #22 ENSPPAG00000042780 OR2AT4 (ENSPPAG00000043903) ENSPPAG00000015262 SLCO2B1 (ENSPPAG00000031133) ARRB1 (ENSPPAG00000040868) RPS3 (ENSPPAG00000029211) KLHL35 (ENSPPAG00000010945) GDPD5 (ENSPPAG00000042473) ENSPPAG00000041483 ENSPPAG00000040024 MOGAT2 (ENSPPAG00000012175) DGAT2 (ENSPPAG00000015345) UVRAG (ENSPPAG00000027735) WNT11 (ENSPPAG00000010959) ENSPPAG00000030327 Chimpanzee MODERN SPECIES 2 ENSPTRG00000049877 DNAJB13 (ENSPTRG00000047842) UCP2 (ENSPTRG00000004055) UCP3 (ENSPTRG00000004056) C2CD3 (ENSPTRG00000004058) PPME1 (ENSPTRG00000004061) P4HA3 (ENSPTRG00000004063) PGM2L1 (ENSPTRG00000004064) KCNE3 (ENSPTRG00000038909) LIPT2 (ENSPTRG00000004066) POLD3 (ENSPTRG00000004067) CHRDL2 (ENSPTRG00000004069) RNF169 (ENSPTRG00000049248) XRRA1 (ENSPTRG00000004071) SPCS2 (ENSPTRG00000004073) NEU3 (ENSPTRG00000043132) #22 ENSPTRG00000043832 OR2AT4 (ENSPTRG00000004076) ENSPTRG00000047698 SLCO2B1 (ENSPTRG00000004078) TPBGL (ENSPTRG00000052868) ARRB1 (ENSPTRG00000004079) RPS3 (ENSPTRG00000048574) KLHL35 (ENSPTRG00000004081) GDPD5 (ENSPTRG00000046453) SERPINH1 (ENSPTRG00000004083) MAP6 (ENSPTRG00000004085) MOGAT2 (ENSPTRG00000004086) DGAT2 (ENSPTRG00000004087) UVRAG (ENSPTRG00000004088) WNT11 (ENSPTRG00000004090) Human MODERN SPECIES 2 PAAF1 (ENSG00000175575) DNAJB13 (ENSG00000187726) UCP2 (ENSG00000175567) UCP3 (ENSG00000175564) C2CD3 (ENSG00000168014) PPME1 (ENSG00000214517) P4HA3 (ENSG00000149380) PGM2L1 (ENSG00000165434) KCNE3 (ENSG00000175538) LIPT2 (ENSG00000175536) POLD3 (ENSG00000077514) CHRDL2 (ENSG00000054938) RNF169 (ENSG00000166439) XRRA1 (ENSG00000166435) SPCS2 (ENSG00000118363) NEU3 (ENSG00000162139) #22 OR2AT4 (ENSG00000171561) SLCO2B1 (ENSG00000137491) TPBGL (ENSG00000261594) ARRB1 (ENSG00000137486) RPS3 (ENSG00000149273) KLHL35 (ENSG00000149243) GDPD5 (ENSG00000158555) SERPINH1 (ENSG00000149257) MAP6 (ENSG00000171533) MOGAT2 (ENSG00000166391) DGAT2 (ENSG00000062282) UVRAG (ENSG00000198382) WNT11 (ENSG00000085741) THAP12 (ENSG00000137492) GVQW3 (ENSG00000179240) Orangutan MODERN SPECIES 2 DNAJB13 (ENSPPYG00000003667) UCP2 (ENSPPYG00000003668) UCP3 (ENSPPYG00000003669) C2CD3 (ENSPPYG00000003670) PPME1 (ENSPPYG00000003671) P4HA3 (ENSPPYG00000003673) PGM2L1 (ENSPPYG00000003674) KCNE3 (ENSPPYG00000003675) LIPT2 (ENSPPYG00000003676) POLD3 (ENSPPYG00000003677) CHRDL2 (ENSPPYG00000003678) RNF169 (ENSPPYG00000003680) XRRA1 (ENSPPYG00000003681) ENSPPYG00000034798 SPCS2 (ENSPPYG00000003682) NEU3 (ENSPPYG00000033538) #22 SLCO2B1 (ENSPPYG00000003684) TPBGL (ENSPPYG00000003686) ARRB1 (ENSPPYG00000039190) RPS3 (ENSPPYG00000003688) KLHL35 (ENSPPYG00000003689) GDPD5 (ENSPPYG00000003690) SERPINH1 (ENSPPYG00000003691) MAP6 (ENSPPYG00000003692) MOGAT2 (ENSPPYG00000003693) DGAT2 (ENSPPYG00000003694) UVRAG (ENSPPYG00000003695) WNT11 (ENSPPYG00000003696) ENSPPYG00000040892 THAP12 (ENSPPYG00000003697) ENSPPYG00000003698 Gibbon MODERN SPECIES 5 UCP2 (ENSNLEG00000017073) UCP3 (ENSNLEG00000017067) C2CD3 (ENSNLEG00000017035) ENSNLEG00000017034 PPME1 (ENSNLEG00000029165) P4HA3 (ENSNLEG00000017017) PGM2L1 (ENSNLEG00000017008) KCNE3 (ENSNLEG00000028730) LIPT2 (ENSNLEG00000017004) POLD3 (ENSNLEG00000016988) CHRDL2 (ENSNLEG00000016982) RNF169 (ENSNLEG00000016979) ENSNLEG00000035901 XRRA1 (ENSNLEG00000016958) ENSNLEG00000034374 NEU3 (ENSNLEG00000016947) #22 ENSNLEG00000016946 SLCO2B1 (ENSNLEG00000033859) TPBGL (ENSNLEG00000018145) ARRB1 (ENSNLEG00000016918) ENSNLEG00000036221 ENSNLEG00000016911 ENSNLEG00000016910 GDPD5 (ENSNLEG00000028251) SERPINH1 (ENSNLEG00000016882) MAP6 (ENSNLEG00000016878) MOGAT2 (ENSNLEG00000028048) DGAT2 (ENSNLEG00000016866) UVRAG (ENSNLEG00000027301) WNT11 (ENSNLEG00000016841) ENSNLEG00000032732 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.a.a ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048.b ENSGT00440000038181.eb.a.a.b ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048.b ENSGT00440000038181.eb.a.a.b ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00510000046985.h.b.a.b ENSGT00390000006485.c ENSGT00910000146972 ENSGT00390000008610.a.a ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e Macaca ANCESTRAL SPECIES 2 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048.b ENSGT00440000038181.eb.a.a.b ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113.b ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.a ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Pig-tailed macaque MODERN SPECIES 423 C2CD3 (ENSMNEG00000043159) PPME1 (ENSMNEG00000031477) P4HA3 (ENSMNEG00000034504) ENSMNEG00000003571 ENSMNEG00000025468 PGM2L1 (ENSMNEG00000030625) KCNE3 (ENSMNEG00000026796) LIPT2 (ENSMNEG00000029656) ENSMNEG00000035237 ENSMNEG00000036818 ENSMNEG00000043787 CHRDL2 (ENSMNEG00000033501) RNF169 (ENSMNEG00000011250) XRRA1 (ENSMNEG00000041388) ENSMNEG00000040433 NEU3 (ENSMNEG00000036089) #22 ENSMNEG00000031819 OR2AT4 (ENSMNEG00000004250) ENSMNEG00000043807 ENSMNEG00000030448 SLCO2B1 (ENSMNEG00000042734) TPBGL (ENSMNEG00000021296) ARRB1 (ENSMNEG00000040641) ENSMNEG00000032069 KLHL35 (ENSMNEG00000038478) GDPD5 (ENSMNEG00000040623) SERPINH1 (ENSMNEG00000034292) MAP6 (ENSMNEG00000028588) MOGAT2 (ENSMNEG00000017020) DGAT2 (ENSMNEG00000045455) UVRAG (ENSMNEG00000036116) Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000166824 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048.b ENSGT00440000038181.eb.a.a.b ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113.b ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.a ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Crab-eating macaque MODERN SPECIES 5 DNAJB13 (ENSMFAG00000035964) UCP2 (ENSMFAG00000003662) UCP3 (ENSMFAG00000001176) C2CD3 (ENSMFAG00000027579) PPME1 (ENSMFAG00000031619) PGM2L1 (ENSMFAG00000031326) KCNE3 (ENSMFAG00000028410) LIPT2 (ENSMFAG00000038446) ENSMFAG00000049105 ENSMFAG00000003267 ENSMFAG00000001432 CHRDL2 (ENSMFAG00000042027) RNF169 (ENSMFAG00000031265) XRRA1 (ENSMFAG00000002984) ENSMFAG00000040665 NEU3 (ENSMFAG00000034589) #22 ENSMFAG00000062063 ENSMFAG00000035199 OR2AT4 (ENSMFAG00000015937) ENSMFAG00000049841 SLCO2B1 (ENSMFAG00000042845) ARRB1 (ENSMFAG00000042650) ENSMFAG00000000525 KLHL35 (ENSMFAG00000031078) GDPD5 (ENSMFAG00000043053) SERPINH1 (ENSMFAG00000043814) MAP6 (ENSMFAG00000064715) MOGAT2 (ENSMFAG00000032272) DGAT2 (ENSMFAG00000042930) UVRAG (ENSMFAG00000001657) WNT11 (ENSMFAG00000043196) Rhesus MODERN SPECIES 5 UCP2 (ENSMMUG00000002605) UCP3 (ENSMMUG00000051795) C2CD3 (ENSMMUG00000010321) PPME1 (ENSMMUG00000017398) P4HA3 (ENSMMUG00000017399) PGM2L1 (ENSMMUG00000017402) ENSMMUG00000056316 KCNE3 (ENSMMUG00000052952) LIPT2 (ENSMMUG00000013094) ENSMMUG00000013093 POLD3 (ENSMMUG00000020643) CHRDL2 (ENSMMUG00000020644) RNF169 (ENSMMUG00000052870) XRRA1 (ENSMMUG00000021039) SPCS2 (ENSMMUG00000010685) NEU3 (ENSMMUG00000010686) #22 ENSMMUG00000064190 SLCO2B1 (ENSMMUG00000009126) OR2AT4 (ENSMMUG00000010688) ENSMMUG00000047594 TPBGL (ENSMMUG00000045580) ARRB1 (ENSMMUG00000017529) ENSMMUG00000060246 RPS3 (ENSMMUG00000009019) KLHL35 (ENSMMUG00000063403) GDPD5 (ENSMMUG00000009022) SERPINH1 (ENSMMUG00000007675) MAP6 (ENSMMUG00000007676) MOGAT2 (ENSMMUG00000000506) DGAT2 (ENSMMUG00000000185) UVRAG (ENSMMUG00000000187) Cercopithecinae_b ANCESTRAL SPECIES 32 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048.b ENSGT00440000038181.eb.a.a.b ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00390000006485.c ENSGT00910000146972 ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b Cercopithecinae_d ANCESTRAL SPECIES 27 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00910000147753 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048.b ENSGT00440000038181.eb.a.a.b ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00390000006485.c ENSGT00910000146972 ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b Drill MODERN SPECIES 1404 ENSMLEG00000036513 ENSMLEG00000037619 NEU3 (ENSMLEG00000036085) #22 ENSMLEG00000028250 OR2AT4 (ENSMLEG00000028367) SLCO2B1 (ENSMLEG00000040970) ARRB1 (ENSMLEG00000038818) ENSMLEG00000001141 RPS3 (ENSMLEG00000027047) ENSMLEG00000029117 GDPD5 (ENSMLEG00000038219) SERPINH1 (ENSMLEG00000029842) MAP6 (ENSMLEG00000003608) MOGAT2 (ENSMLEG00000031977) DGAT2 (ENSMLEG00000043052) UVRAG (ENSMLEG00000043625) Sooty mangabey MODERN SPECIES 545 DNAJB13 (ENSCATG00000031572) UCP2 (ENSCATG00000039292) UCP3 (ENSCATG00000037582) C2CD3 (ENSCATG00000044098) PPME1 (ENSCATG00000033372) P4HA3 (ENSCATG00000035672) ENSCATG00000011991 PGM2L1 (ENSCATG00000029770) LIPT2 (ENSCATG00000029187) ENSCATG00000000611 ENSCATG00000043513 CHRDL2 (ENSCATG00000018972) RNF169 (ENSCATG00000043238) XRRA1 (ENSCATG00000039406) ENSCATG00000039999 NEU3 (ENSCATG00000029743) #22 ENSCATG00000019868 OR2AT4 (ENSCATG00000009927) ENSCATG00000029708 SLCO2B1 (ENSCATG00000028037) TPBGL (ENSCATG00000010167) ARRB1 (ENSCATG00000039690) RPS3 (ENSCATG00000035348) KLHL35 (ENSCATG00000042763) ENSCATG00000041303 GDPD5 (ENSCATG00000030069) SERPINH1 (ENSCATG00000043530) MAP6 (ENSCATG00000044768) MOGAT2 (ENSCATG00000038955) DGAT2 (ENSCATG00000001407) UVRAG (ENSCATG00000039451) Olive baboon DUPLICATION Olive baboon MODERN SPECIES 3 ENSPANG00000037152 ENSPANG00000042947 ENSPANG00000038227 XRRA1 (ENSPANG00000017794) RNF169 (ENSPANG00000005996) CHRDL2 (ENSPANG00000011367) ENSPANG00000034020 ENSPANG00000040935 ENSPANG00000051353 ENSPANG00000014355 ENSPANG00000045204 ENSPANG00000050947 ENSPANG00000037679 ENSPANG00000049173 ENSPANG00000034355 ENSPANG00000010014 #22 ENSPANG00000048808 ENSPANG00000042782 SLCO2B1 (ENSPANG00000005995) TPBGL (ENSPANG00000050172) ARRB1 (ENSPANG00000011945) RPS3 (ENSPANG00000016549) KLHL35 (ENSPANG00000033783) ENSPANG00000042578 GDPD5 (ENSPANG00000011141) SERPINH1 (ENSPANG00000033081) MAP6 (ENSPANG00000048934) MOGAT2 (ENSPANG00000008371) DGAT2 (ENSPANG00000005994) UVRAG (ENSPANG00000012471) WNT11 (ENSPANG00000014353) Olive baboon MODERN SPECIES 100 ENSPANG00000040323 ENSPANG00000046209 ENSPANG00000046333 ENSPANG00000045786 #22 ENSPANG00000046385 ENSPANG00000044001 Vervet Monkey MODERN SPECIES ENSCSAG00000000623 DNAJB13 (ENSCSAG00000004053) UCP2 (ENSCSAG00000004051) UCP3 (ENSCSAG00000004048) C2CD3 (ENSCSAG00000004043) PPME1 (ENSCSAG00000004025) P4HA3 (ENSCSAG00000004019) PGM2L1 (ENSCSAG00000004011) KCNE3 (ENSCSAG00000000622) LIPT2 (ENSCSAG00000004004) ENSCSAG00000004000 CHRDL2 (ENSCSAG00000003992) RNF169 (ENSCSAG00000003988) XRRA1 (ENSCSAG00000003983) ENSCSAG00000003967 NEU3 (ENSCSAG00000003960) #22 OR2AT4 (ENSCSAG00000000621) SLCO2B1 (ENSCSAG00000003953) TPBGL (ENSCSAG00000000620) ARRB1 (ENSCSAG00000003950) RPS3 (ENSCSAG00000003937) ENSCSAG00000000619 ENSCSAG00000003917 GDPD5 (ENSCSAG00000003915) SERPINH1 (ENSCSAG00000003909) MAP6 (ENSCSAG00000003908) MOGAT2 (ENSCSAG00000003906) DGAT2 (ENSCSAG00000003904) UVRAG (ENSCSAG00000003902) WNT11 (ENSCSAG00000003899) THAP12 (ENSCSAG00000003894) Rhinopithecus ANCESTRAL SPECIES 21 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00910000148066 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181.eb.a.a ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163.e ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b.y.a Black snub-nosed monkey MODERN SPECIES 775 UCP2 (ENSRBIG00000028444) UCP3 (ENSRBIG00000032946) C2CD3 (ENSRBIG00000036054) PPME1 (ENSRBIG00000032741) P4HA3 (ENSRBIG00000034204) ENSRBIG00000002437 PGM2L1 (ENSRBIG00000043298) LIPT2 (ENSRBIG00000031912) ENSRBIG00000001091 ENSRBIG00000011853 ENSRBIG00000044531 CHRDL2 (ENSRBIG00000028182) RNF169 (ENSRBIG00000035895) XRRA1 (ENSRBIG00000036115) ENSRBIG00000011964 NEU3 (ENSRBIG00000040960) #22 ENSRBIG00000043933 OR2AT4 (ENSRBIG00000036161) ENSRBIG00000037921 SLCO2B1 (ENSRBIG00000035476) ARRB1 (ENSRBIG00000041523) RPS3 (ENSRBIG00000044916) KLHL35 (ENSRBIG00000036873) GDPD5 (ENSRBIG00000037527) SERPINH1 (ENSRBIG00000028537) MAP6 (ENSRBIG00000032932) Golden snub-nosed monkey MODERN SPECIES 1304 C2CD3 (ENSRROG00000036372) PPME1 (ENSRROG00000031513) P4HA3 (ENSRROG00000030733) ENSRROG00000025736 PGM2L1 (ENSRROG00000035061) KCNE3 (ENSRROG00000008117) LIPT2 (ENSRROG00000044982) ENSRROG00000018216 ENSRROG00000040083 ENSRROG00000031930 ENSRROG00000041045 CHRDL2 (ENSRROG00000029406) RNF169 (ENSRROG00000034271) XRRA1 (ENSRROG00000038284) ENSRROG00000009662 NEU3 (ENSRROG00000029086) #22 ENSRROG00000007318 OR2AT4 (ENSRROG00000042697) ENSRROG00000038845 SLCO2B1 (ENSRROG00000029185) ARRB1 (ENSRROG00000037258) RPS3 (ENSRROG00000009870) KLHL35 (ENSRROG00000042922) GDPD5 (ENSRROG00000032119) SERPINH1 (ENSRROG00000034821) ENSRROG00000033527 MOGAT2 (ENSRROG00000018289) DGAT2 (ENSRROG00000029306) UVRAG (ENSRROG00000038883) WNT11 (ENSRROG00000031068) THAP12 (ENSRROG00000026238) Platyrrhini ANCESTRAL SPECIES 3 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Cebidae ANCESTRAL SPECIES ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Cebidae_a ANCESTRAL SPECIES 10 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00630000089910.ib.b.a ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00910000148220 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b ENSGT00440000033232.d Capuchin MODERN SPECIES 79 PAAF1 (ENSCCAG00000031610) DNAJB13 (ENSCCAG00000030909) UCP2 (ENSCCAG00000037001) UCP3 (ENSCCAG00000031398) C2CD3 (ENSCCAG00000030238) PPME1 (ENSCCAG00000026198) P4HA3 (ENSCCAG00000020903) PGM2L1 (ENSCCAG00000036451) ENSCCAG00000021883 LIPT2 (ENSCCAG00000036486) POLD3 (ENSCCAG00000020511) CHRDL2 (ENSCCAG00000022957) RNF169 (ENSCCAG00000033395) XRRA1 (ENSCCAG00000028930) SPCS2 (ENSCCAG00000021321) NEU3 (ENSCCAG00000030531) #22 SLCO2B1 (ENSCCAG00000020122) TPBGL (ENSCCAG00000020228) ARRB1 (ENSCCAG00000022418) RPS3 (ENSCCAG00000022155) KLHL35 (ENSCCAG00000024110) GDPD5 (ENSCCAG00000037483) SERPINH1 (ENSCCAG00000036630) MAP6 (ENSCCAG00000038045) ENSCCAG00000019602 MOGAT2 (ENSCCAG00000033399) DGAT2 (ENSCCAG00000025871) UVRAG (ENSCCAG00000004406) WNT11 (ENSCCAG00000006507) THAP12 (ENSCCAG00000030247) GVQW3 (ENSCCAG00000017675) Bolivian squirrel monkey MODERN SPECIES 50 UCP2 (ENSSBOG00000028197) UCP3 (ENSSBOG00000019272) C2CD3 (ENSSBOG00000023741) PPME1 (ENSSBOG00000031236) P4HA3 (ENSSBOG00000021114) PGM2L1 (ENSSBOG00000021467) ENSSBOG00000029238 ENSSBOG00000026074 ENSSBOG00000016069 LIPT2 (ENSSBOG00000028686) POLD3 (ENSSBOG00000026466) CHRDL2 (ENSSBOG00000030089) RNF169 (ENSSBOG00000025127) XRRA1 (ENSSBOG00000023521) ENSSBOG00000018610 NEU3 (ENSSBOG00000032626) #22 SLCO2B1 (ENSSBOG00000029587) ARRB1 (ENSSBOG00000027344) RPS3 (ENSSBOG00000021847) KLHL35 (ENSSBOG00000032736) GDPD5 (ENSSBOG00000029684) ENSSBOG00000015754 SERPINH1 (ENSSBOG00000023324) MAP6 (ENSSBOG00000034653) MOGAT2 (ENSSBOG00000028341) DGAT2 (ENSSBOG00000034703) UVRAG (ENSSBOG00000029244) WNT11 (ENSSBOG00000020772) GVQW3 (ENSSBOG00000031479) EMSY (ENSSBOG00000035462) LRRC32 (ENSSBOG00000034148) Marmoset MODERN SPECIES 2 ENSCJAG00000083255 C2CD3 (ENSCJAG00000015764) PPME1 (ENSCJAG00000015734) P4HA3 (ENSCJAG00000015710) ENSCJAG00000073784 PGM2L1 (ENSCJAG00000015692) KCNE3 (ENSCJAG00000042738) LIPT2 (ENSCJAG00000038278) ENSCJAG00000053703 POLD3 (ENSCJAG00000015657) CHRDL2 (ENSCJAG00000015616) RNF169 (ENSCJAG00000015610) ENSCJAG00000083650 XRRA1 (ENSCJAG00000015587) SPCS2 (ENSCJAG00000015576) NEU3 (ENSCJAG00000015573) #22 ENSCJAG00000067324 ENSCJAG00000022088 OR2AT4 (ENSCJAG00000015558) SLCO2B1 (ENSCJAG00000015525) TPBGL (ENSCJAG00000022087) ARRB1 (ENSCJAG00000015459) ENSCJAG00000072627 RPS3 (ENSCJAG00000015424) KLHL35 (ENSCJAG00000015421) GDPD5 (ENSCJAG00000015399) SERPINH1 (ENSCJAG00000015377) MAP6 (ENSCJAG00000015365) MOGAT2 (ENSCJAG00000015357) DGAT2 (ENSCJAG00000015337) UVRAG (ENSCJAG00000015319) Mas night monkey MODERN SPECIES 575 KCNE3 (ENSANAG00000014115) ENSANAG00000020663 POLD3 (ENSANAG00000030270) CHRDL2 (ENSANAG00000025866) RNF169 (ENSANAG00000025789) XRRA1 (ENSANAG00000037118) ENSANAG00000035609 NEU3 (ENSANAG00000031004) #22 ENSANAG00000033225 SLCO2B1 (ENSANAG00000027304) TPBGL (ENSANAG00000022236) ARRB1 (ENSANAG00000037078) RPS3 (ENSANAG00000027669) KLHL35 (ENSANAG00000029592) GDPD5 (ENSANAG00000029652) SERPINH1 (ENSANAG00000002099) ENSANAG00000028881 ENSANAG00000025561 MOGAT2 (ENSANAG00000030684) DGAT2 (ENSANAG00000033159) UVRAG (ENSANAG00000037389) WNT11 (ENSANAG00000023221) THAP12 (ENSANAG00000034553) Tarsier MODERN SPECIES 5056 ENSTSYG00000002493 SPCS2 (ENSTSYG00000028071) NEU3 (ENSTSYG00000003175) #22 ENSTSYG00000012446 Atlantogenata ANCESTRAL SPECIES 35 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.c.b Afrotheria ANCESTRAL SPECIES 41 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.d Afrotheria_a ANCESTRAL SPECIES 71 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049 ENSGT00940000163113 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a.d Elephant MODERN SPECIES 563 PAAF1 (ENSLAFG00000003807) DNAJB13 (ENSLAFG00000032032) UCP2 (ENSLAFG00000015866) UCP3 (ENSLAFG00000005399) ENSLAFG00000005407 PPME1 (ENSLAFG00000005421) P4HA3 (ENSLAFG00000022200) PGM2L1 (ENSLAFG00000002883) KCNE3 (ENSLAFG00000022215) LIPT2 (ENSLAFG00000012749) ENSLAFG00000004098 CHRDL2 (ENSLAFG00000009783) RNF169 (ENSLAFG00000005991) XRRA1 (ENSLAFG00000005994) SPCS2 (ENSLAFG00000005996) NEU3 (ENSLAFG00000016015) #22 ENSLAFG00000031826 OR2AT4 (ENSLAFG00000022125) ENSLAFG00000026465 ENSLAFG00000029633 ENSLAFG00000026542 SLCO2B1 (ENSLAFG00000018182) TPBGL (ENSLAFG00000026034) ARRB1 (ENSLAFG00000022589) RPS3 (ENSLAFG00000004297) KLHL35 (ENSLAFG00000021869) GDPD5 (ENSLAFG00000001164) SERPINH1 (ENSLAFG00000003780) MAP6 (ENSLAFG00000003783) MOGAT2 (ENSLAFG00000011173) DGAT2 (ENSLAFG00000003799) Hyrax MODERN SPECIES 8582 NEU3 (ENSPCAG00000013559) #22 Tenrec MODERN SPECIES 5917 NEU3 (ENSETEG00000012991) #22 Xenarthra ANCESTRAL SPECIES 289 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000155001.B.f ENSGT00390000006450 ENSGT01060000248648 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000163113 ENSGT00940000162049 Armadillo MODERN SPECIES 4480 UCP3 (ENSDNOG00000024593) C2CD3 (ENSDNOG00000016716) ENSDNOG00000008960 P4HA3 (ENSDNOG00000008987) KCNE3 (ENSDNOG00000016060) LIPT2 (ENSDNOG00000008392) POLD3 (ENSDNOG00000010554) CHRDL2 (ENSDNOG00000004316) RNF169 (ENSDNOG00000003895) XRRA1 (ENSDNOG00000018998) SPCS2 (ENSDNOG00000017406) NEU3 (ENSDNOG00000039722) #22 OR2AT4 (ENSDNOG00000005086) ENSDNOG00000034071 ENSDNOG00000042687 Sloth MODERN SPECIES 4816 NEU3 (ENSCHOG00000002567) #22 Marsupialia ANCESTRAL SPECIES 28 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.yb ENSGT00940000162049.xb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT01100000263754 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Marsupialia_b ANCESTRAL SPECIES 20 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.yb ENSGT00940000162049.xb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT01100000263754 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Diprotodontia ANCESTRAL SPECIES 24 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.yb ENSGT00940000162049.xb ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT01100000263754 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 Diprotodontia_a ANCESTRAL SPECIES 25 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524.n ENSGT00940000161030 ENSGT00510000048072 ENSGT00390000004396 ENSGT00940000158967 ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000162049.yb ENSGT00940000162049.xb.c ENSGT00940000162049.xb.d ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00950000182887.C.a.b ENSGT00390000008610.a.b.a.b ENSGT00940000161093 ENSGT00940000159690 ENSGT00940000156163 ENSGT01100000263754 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 koala MODERN SPECIES 35 PAAF1 (ENSPCIG00000021816) ENSPCIG00000033407 DNAJB13 (ENSPCIG00000021818) ENSPCIG00000021820 UCP3 (ENSPCIG00000021821) C2CD3 (ENSPCIG00000021823) PPME1 (ENSPCIG00000021824) P4HA3 (ENSPCIG00000021825) PGM2L1 (ENSPCIG00000021827) KCNE3 (ENSPCIG00000021830) LIPT2 (ENSPCIG00000021831) ENSPCIG00000021832 CHRDL2 (ENSPCIG00000021833) ENSPCIG00000021835 SPCS2 (ENSPCIG00000021840) NEU3 (ENSPCIG00000021841) #22 ENSPCIG00000021843 ENSPCIG00000024126 ENSPCIG00000024125 SLCO2B1 (ENSPCIG00000024128) ENSPCIG00000024142 ARRB1 (ENSPCIG00000024137) ENSPCIG00000024144 KLHL35 (ENSPCIG00000024150) ENSPCIG00000024154 ENSPCIG00000031819 SERPINH1 (ENSPCIG00000031151) ENSPCIG00000009765 ENSPCIG00000009766 MOGAT2 (ENSPCIG00000009767) DGAT2 (ENSPCIG00000009770) Common wonbat MODERN SPECIES 342 COA4 (ENSVURG00010017934) PAAF1 (ENSVURG00010017927) DNAJB13 (ENSVURG00010017923) ENSVURG00010017918 UCP3 (ENSVURG00010017912) C2CD3 (ENSVURG00010017401) PPME1 (ENSVURG00010017299) P4HA3 (ENSVURG00010017249) PGM2L1 (ENSVURG00010017230) KCNE3 (ENSVURG00010017220) LIPT2 (ENSVURG00010017202) ENSVURG00010017183 CHRDL2 (ENSVURG00010017166) ENSVURG00010017157 XRRA1 (ENSVURG00010017136) NEU3 (ENSVURG00010017132) #22 ENSVURG00010017126 ENSVURG00010017123 ENSVURG00010017115 SLCO2B1 (ENSVURG00010017093) TPBGL (ENSVURG00010017080) ARRB1 (ENSVURG00010017049) ENSVURG00010017023 ENSVURG00010017014 GDPD5 (ENSVURG00010017005) SERPINH1 (ENSVURG00010016989) ENSVURG00010016983 ENSVURG00010016973 MOGAT2 (ENSVURG00010016965) DGAT2 (ENSVURG00010016956) UVRAG (ENSVURG00010016946) Wallaby MODERN SPECIES 11798 ENSMEUG00000015447 #22 Tasmanian devil MODERN SPECIES 2 PAAF1 (ENSSHAG00000013811) DNAJB13 (ENSSHAG00000013715) UCP2 (ENSSHAG00000028458) UCP3 (ENSSHAG00000013494) ENSSHAG00000012678 PPME1 (ENSSHAG00000012353) P4HA3 (ENSSHAG00000012092) PGM2L1 (ENSSHAG00000011567) KCNE3 (ENSSHAG00000023197) LIPT2 (ENSSHAG00000026717) ENSSHAG00000010021 CHRDL2 (ENSSHAG00000008806) RNF169 (ENSSHAG00000032266) XRRA1 (ENSSHAG00000006643) SPCS2 (ENSSHAG00000005389) ENSSHAG00000021653 #22 ENSSHAG00000003923 ENSSHAG00000001456 SLCO2B1 (ENSSHAG00000003701) ENSSHAG00000012502 ARRB1 (ENSSHAG00000012018) ENSSHAG00000011198 ENSSHAG00000010962 GDPD5 (ENSSHAG00000009805) SERPINH1 (ENSSHAG00000009364) ENSSHAG00000024198 ENSSHAG00000021367 MOGAT2 (ENSSHAG00000001147) DGAT2 (ENSSHAG00000031450) UVRAG (ENSSHAG00000029637) WNT11 (ENSSHAG00000010411) Opossum MODERN SPECIES 3 PAAF1 (ENSMODG00000007569) DNAJB13 (ENSMODG00000007547) UCP2 (ENSMODG00000007498) UCP3 (ENSMODG00000007461) C2CD3 (ENSMODG00000007448) PPME1 (ENSMODG00000007418) P4HA3 (ENSMODG00000007397) PGM2L1 (ENSMODG00000007336) KCNE3 (ENSMODG00000007209) LIPT2 (ENSMODG00000007202) ENSMODG00000007196 CHRDL2 (ENSMODG00000007176) RNF169 (ENSMODG00000007163) XRRA1 (ENSMODG00000007151) SPCS2 (ENSMODG00000042403) NEU3 (ENSMODG00000039572) #22 ENSMODG00000036612 ENSMODG00000007071 ENSMODG00000049054 ENSMODG00000029536 ENSMODG00000024027 ENSMODG00000007063 SLCO2B1 (ENSMODG00000007051) ENSMODG00000007031 ARRB1 (ENSMODG00000007021) ENSMODG00000024030 RPS3 (ENSMODG00000006945) KLHL35 (ENSMODG00000006983) ENSMODG00000006862 ENSMODG00000045071 SERPINH1 (ENSMODG00000006814) Platypus MODERN SPECIES 11 IPO8 (ENSOANG00000042369) TMTC1 (ENSOANG00000046621) ERGIC2 (ENSOANG00000010582) FAR2 (ENSOANG00000006583) CCDC91 (ENSOANG00000041500) PTHLH (ENSOANG00000002270) MRPS35 (ENSOANG00000010504) PGM2L1 (ENSOANG00000011419) KCNE3 (ENSOANG00000010596) LIPT2 (ENSOANG00000046240) ENSOANG00000046791 CHRDL2 (ENSOANG00000015335) ENSOANG00000050252 ENSOANG00000038765 SPCS2 (ENSOANG00000042616) NEU3 (ENSOANG00000039167) #22 ENSOANG00000040585 ENSOANG00000042925 ENSOANG00000038513 ENSOANG00000042170 STARD10 (ENSOANG00000038761) ARAP1 (ENSOANG00000011819) ENSOANG00000015978 PDE2A (ENSOANG00000009297) ENSOANG00000015107 ENSOANG00000043749 ENSOANG00000008114 ENSOANG00000005326 ENSOANG00000003846 ENSOANG00000005516 ENSOANG00000013753 Sauria ANCESTRAL SPECIES 2 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Archelosauria ANCESTRAL SPECIES ENSGT00960000190186 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Archosauria ANCESTRAL SPECIES 2 ENSGT00960000190186 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Aves ANCESTRAL SPECIES 33 ENSGT00960000190186 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Neognathae ANCESTRAL SPECIES 1 ENSGT00960000190186 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Galloanserae ANCESTRAL SPECIES 1 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000161067.y.b ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Anatidae ANCESTRAL SPECIES 56 ENSGT00510000047299 ENSGT00550000074799 ENSGT00390000015701 ENSGT00940000161067.y.b ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Pink-footed goose MODERN SPECIES 299 ENSABRG00000018560 CHRDL2 (ENSABRG00000018553) RNF169 (ENSABRG00000018549) ENSABRG00000018547 ENSABRG00000018544 SPCS2 (ENSABRG00000018542) NEU3 (ENSABRG00000018541) #22 P4HA3 (ENSABRG00000018537) PPME1 (ENSABRG00000018466) C2CD3 (ENSABRG00000018434) UCP3 (ENSABRG00000018389) DNAJB13 (ENSABRG00000018385) PAAF1 (ENSABRG00000018378) COA4 (ENSABRG00000018367) MRPL48 (ENSABRG00000018363) RAB6A (ENSABRG00000018342) PLEKHB1 (ENSABRG00000018330) FAM168A (ENSABRG00000018321) P2RY6 (ENSABRG00000018302) P2RY2 (ENSABRG00000018299) Duck MODERN SPECIES 807 NEU3 (ENSAPLG00000018510) #22 Phasianidae ANCESTRAL SPECIES ENSGT00390000000938 ENSGT00960000190186 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000161067.y.b ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Japanese quail MODERN SPECIES ENSCJPG00005006503 ENSCJPG00005006498 SLCO2B1 (ENSCJPG00005006494) ENSCJPG00005006493 ENSCJPG00005006490 ENSCJPG00005006488 PGM2L1 (ENSCJPG00005006480) KCNE3 (ENSCJPG00005006478) LIPT2 (ENSCJPG00005006477) ENSCJPG00005006475 CHRDL2 (ENSCJPG00005006470) RNF169 (ENSCJPG00005006467) XRRA1 (ENSCJPG00005006465) ENSCJPG00005006460 SPCS2 (ENSCJPG00005006459) NEU3 (ENSCJPG00005006454) #22 P4HA3 (ENSCJPG00005006443) PPME1 (ENSCJPG00005006442) C2CD3 (ENSCJPG00005006424) UCP3 (ENSCJPG00005006418) PAAF1 (ENSCJPG00005006417) COA4 (ENSCJPG00005006416) MRPL48 (ENSCJPG00005006415) RAB6A (ENSCJPG00005006414) PLEKHB1 (ENSCJPG00005006365) FAM168A (ENSCJPG00005006354) RELT (ENSCJPG00005006338) ARHGEF17 (ENSCJPG00005006203) P2RY6 (ENSCJPG00005006202) P2RY2 (ENSCJPG00005006201) FCHSD2 (ENSCJPG00005005914) Phasianidae_b ANCESTRAL SPECIES ENSGT00390000000938 ENSGT00960000190186 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000161067.y.b ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A Chicken MODERN SPECIES ENSGALG00010001744 ENSGALG00010001746 ENSGALG00010001748 ARRB1 (ENSGALG00010001752) ENSGALG00010001771 ENSGALG00010001774 SLCO2B1 (ENSGALG00010001796) ENSGALG00010003512 PGM2L1 (ENSGALG00010001820) KCNE3 (ENSGALG00010001822) LIPT2 (ENSGALG00010001825) POLD3 (ENSGALG00010001829) CHRDL2 (ENSGALG00010001854) RNF169 (ENSGALG00010001860) XRRA1 (ENSGALG00010001862) NEU3 (ENSGALG00010001886) #22 P4HA3 (ENSGALG00010001895) PPME1 (ENSGALG00010002478) C2CD3 (ENSGALG00010002507) DNAJB13 (ENSGALG00010002523) UCP3 (ENSGALG00010002543) PAAF1 (ENSGALG00010002561) COA4 (ENSGALG00010002567) MRPL48 (ENSGALG00010002577) RAB6A (ENSGALG00010002619) FAM168A (ENSGALG00010002647) PLEKHB1 (ENSGALG00010002681) RELT (ENSGALG00010002707) ENSGALG00010002719 P2RY6 (ENSGALG00010002807) P2RY2 (ENSGALG00010002878) Turkey MODERN SPECIES ENSMGAG00000021767 ENSMGAG00000020325 ENSMGAG00000017362 ENSMGAG00000016655 ENSMGAG00000018965 ENSMGAG00000003945 ENSMGAG00000015298 MRPL48 (ENSMGAG00000015300) ENSMGAG00000015302 COA4 (ENSMGAG00000015301) ENSMGAG00000015304 DNAJB13 (ENSMGAG00000015303) P4HA3 (ENSMGAG00000015311) ENSMGAG00000015310 ENSMGAG00000015306 ENSMGAG00000020616 #22 ENSMGAG00000020834 ENSMGAG00000015293 SERPINH1 (ENSMGAG00000015291) ENSMGAG00000021654 ENSMGAG00000015290 KLHL35 (ENSMGAG00000015289) ENSMGAG00000015287 ENSMGAG00000015288 ENSMGAG00000021525 ENSMGAG00000019864 ENSMGAG00000021954 NUP98 (ENSMGAG00000015286) PGAP2 (ENSMGAG00000004172) RHOG (ENSMGAG00000016029) STIM1 (ENSMGAG00000022860) Neognathae_b ANCESTRAL SPECIES ENSGT00940000159817 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Passeriformes ANCESTRAL SPECIES 24 ENSGT00940000161070 ENSGT00530000063946.a ENSGT00940000155551 ENSGT00940000156294 ENSGT00940000159077.b ENSGT00940000156253 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000157964 ENSGT00390000006278 ENSGT00940000163305.a.a ENSGT00390000014210 ENSGT00650000093475 ENSGT00940000154267.B Great tit MODERN SPECIES DNAJB13 (ENSPMJG00000001531) HUNK (ENSPMJG00000001540) ENSPMJG00000001545 SOD1 (ENSPMJG00000001552) TIAM1 (ENSPMJG00000001605) CLDN8 (ENSPMJG00000001672) GRIK1 (ENSPMJG00000001690) ENSPMJG00000001713 SLCO2B1 (ENSPMJG00000001715) PGM2L1 (ENSPMJG00000001729) KCNE3 (ENSPMJG00000001739) ENSPMJG00000001741 CHRDL2 (ENSPMJG00000001802) RNF169 (ENSPMJG00000002090) SPCS2 (ENSPMJG00000002098) NEU3 (ENSPMJG00000002108) #22 P4HA3 (ENSPMJG00000002118) PPME1 (ENSPMJG00000002781) C2CD3 (ENSPMJG00000002786) UCP3 (ENSPMJG00000002802) SYNJ1 (ENSPMJG00000002830) CFAP298 (ENSPMJG00000002842) ENSPMJG00000002844 URB1 (ENSPMJG00000002918) MRAP (ENSPMJG00000002941) ENSPMJG00000002945 Passeriformes_d ANCESTRAL SPECIES 27 ENSGT00940000161070 ENSGT00530000063946.a ENSGT00940000155551 ENSGT00940000156294 ENSGT00940000159077.b ENSGT00940000156253 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000157964 ENSGT00390000006278 ENSGT00940000163305.a.a ENSGT00940000162103 ENSGT00390000014210 ENSGT00650000093475 ENSGT00940000154267.B Passeriformes_g ANCESTRAL SPECIES 28 ENSGT00940000161070 ENSGT00530000063946.a ENSGT00940000155551 ENSGT00940000156294 ENSGT00940000159077.b ENSGT00940000156253 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000157964 ENSGT00390000006278 ENSGT00940000163305.a.a ENSGT00390000014210 ENSGT00940000154267.B Passeroidea ANCESTRAL SPECIES 30 ENSGT00940000161070 ENSGT01010000222551 ENSGT00940000155551 ENSGT00940000156294 ENSGT00940000159077.b ENSGT00940000156253 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000157964 ENSGT00390000006278 ENSGT00940000163305.a.a ENSGT00390000014210 ENSGT00940000154267.B Zebra finch MODERN SPECIES SOD1 (ENSTGUG00000013463) TIAM1 (ENSTGUG00000013461) CLDN8 (ENSTGUG00000013460) GRIK1 (ENSTGUG00000013459) SLCO2B1 (ENSTGUG00000013458) ENSTGUG00000013457 PGM2L1 (ENSTGUG00000013456) KCNE3 (ENSTGUG00000013455) ENSTGUG00000024283 LIPT2 (ENSTGUG00000013454) ENSTGUG00000013453 CHRDL2 (ENSTGUG00000013452) ENSTGUG00000024778 RNF169 (ENSTGUG00000013451) SPCS2 (ENSTGUG00000026426) NEU3 (ENSTGUG00000021465) #22 P4HA3 (ENSTGUG00000013449) PPME1 (ENSTGUG00000013448) C2CD3 (ENSTGUG00000019971) UCP3 (ENSTGUG00000023183) SYNJ1 (ENSTGUG00000013445) CFAP298 (ENSTGUG00000013444) ENSTGUG00000013443 URB1 (ENSTGUG00000013442) COL8A1 (ENSTGUG00000013441) ST3GAL6 (ENSTGUG00000013440) CPOX (ENSTGUG00000013439) ENSTGUG00000013438 GPR161 (ENSTGUG00000013437) TIPRL (ENSTGUG00000026810) SFT2D2 (ENSTGUG00000020039) Neognathae_c ANCESTRAL SPECIES 11 ENSGT00940000159817 ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b Golden eagle MODERN SPECIES 10 PDE2A (ENSACCG00020009991) ARRB1 (ENSACCG00020009965) WDR73 (ENSACCG00020009949) ENSACCG00020009942 SLCO2B1 (ENSACCG00020009937) ENSACCG00020009918 PGM2L1 (ENSACCG00020009896) KCNE3 (ENSACCG00020009883) LIPT2 (ENSACCG00020009876) ENSACCG00020009858 CHRDL2 (ENSACCG00020009830) RNF169 (ENSACCG00020009811) ENSACCG00020009800 ENSACCG00020009788 SPCS2 (ENSACCG00020009775) NEU3 (ENSACCG00020009754) #22 P4HA3 (ENSACCG00020009743) PPME1 (ENSACCG00020009726) ENSACCG00020009709 C2CD3 (ENSACCG00020009627) UCP3 (ENSACCG00020009478) DNAJB13 (ENSACCG00020009453) PAAF1 (ENSACCG00020009437) ENSACCG00020009427 MRPL48 (ENSACCG00020009413) RAB6A (ENSACCG00020009400) PLEKHB1 (ENSACCG00020010723) FAM168A (ENSACCG00020010712) RELT (ENSACCG00020010700) ARHGEF17 (ENSACCG00020010601) P2RY6 (ENSACCG00020010516) Kakapo MODERN SPECIES 11 PDE2A (ENSSHBG00005007700) ENSSHBG00005007683 ARRB1 (ENSSHBG00005007666) ENSSHBG00005007652 ENSSHBG00005007648 SLCO2B1 (ENSSHBG00005007635) ENSSHBG00005007625 PGM2L1 (ENSSHBG00005007613) KCNE3 (ENSSHBG00005007603) LIPT2 (ENSSHBG00005007598) ENSSHBG00005007583 CHRDL2 (ENSSHBG00005007569) RNF169 (ENSSHBG00005007557) ENSSHBG00005007539 SPCS2 (ENSSHBG00005000666) NEU3 (ENSSHBG00005019831) #22 P4HA3 (ENSSHBG00005019829) PPME1 (ENSSHBG00005019821) C2CD3 (ENSSHBG00005019807) UCP3 (ENSSHBG00005019797) DNAJB13 (ENSSHBG00005019793) PAAF1 (ENSSHBG00005019789) COA4 (ENSSHBG00005019785) MRPL48 (ENSSHBG00005019782) RAB6A (ENSSHBG00005019775) PLEKHB1 (ENSSHBG00005019765) FAM168A (ENSSHBG00005019759) RELT (ENSSHBG00005019752) ARHGEF17 (ENSSHBG00005019686) P2RY6 (ENSSHBG00005019665) P2RY2 (ENSSHBG00005019661) Australian saltwater crocodile MODERN SPECIES 27 PGM2L1 (ENSCPRG00005017656) KCNE3 (ENSCPRG00005017651) LIPT2 (ENSCPRG00005017650) ENSCPRG00005017646 ENSCPRG00005017637 CHRDL2 (ENSCPRG00005017634) RNF169 (ENSCPRG00005017629) XRRA1 (ENSCPRG00005017620) SPCS2 (ENSCPRG00005017617) NEU3 (ENSCPRG00005017614) #22 ENSCPRG00005017610 PPME1 (ENSCPRG00005017607) C2CD3 (ENSCPRG00005017597) UCP3 (ENSCPRG00005017577) UCP2 (ENSCPRG00005017576) DNAJB13 (ENSCPRG00005017575) PAAF1 (ENSCPRG00005017560) COA4 (ENSCPRG00005017556) MRPL48 (ENSCPRG00005017547) RAB6A (ENSCPRG00005017541) PLEKHB1 (ENSCPRG00005017535) FAM168A (ENSCPRG00005017532) RELT (ENSCPRG00005017525) ARHGEF17 (ENSCPRG00005017464) P2RY6 (ENSCPRG00005017444) Cryptodira ANCESTRAL SPECIES ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Testudinoidea ANCESTRAL SPECIES 1 ENSGT00390000015701 ENSGT00940000162049.b ENSGT00940000162049.a ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00940000154868.b ENSGT00940000158353.a ENSGT00940000155001.B.c ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Emydidae DUPLICATION Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 84 ENSGT00940000162049.b ENSGT00940000162049.a ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00940000154868.b ENSGT00940000158353.a ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A.g.a #22 ENSGT00950000182944.A.g.b #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a painted turtle MODERN SPECIES ACSS3 (ENSCPBG00000000071) LIN7A (ENSCPBG00000000070) MYF5 (ENSCPBG00000000069) MYF6 (ENSCPBG00000000068) PTPRQ (ENSCPBG00000000067) ENSCPBG00000000065 OTOGL (ENSCPBG00000000063) RPS16 (ENSCPBG00000000062) PPP1R12A (ENSCPBG00000000060) PAWR (ENSCPBG00000000059) ENSCPBG00000000058 SYT1 (ENSCPBG00000000057) RNF169 (ENSCPBG00000000056) XRRA1 (ENSCPBG00000000055) SPCS2 (ENSCPBG00000000054) ENSCPBG00000000053 #22 ENSCPBG00000000052 #22 P4HA3 (ENSCPBG00000000051) PPME1 (ENSCPBG00000000050) C2CD3 (ENSCPBG00000000049) UCP3 (ENSCPBG00000000048) UCP2 (ENSCPBG00000000047) DNAJB13 (ENSCPBG00000000046) PAAF1 (ENSCPBG00000000045) COA4 (ENSCPBG00000000044) MRPL48 (ENSCPBG00000000043) RAB6A (ENSCPBG00000000041) PLEKHB1 (ENSCPBG00000000040) Three-toed box turtle MODERN SPECIES 1963 NEU3 (ENSTMTG00000018953) #22 Emydidae ANCESTRAL SPECIES 84 ENSGT00940000162049.b ENSGT00940000162049.a ENSGT01080000257336.a.c.a ENSGT00940000163536 ENSGT00940000154868.b ENSGT00940000158353.a ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A.g.a #22 ENSGT00950000182944.A.g.b #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a painted turtle MODERN SPECIES LIN7A (ENSCPBG00000000070) MYF5 (ENSCPBG00000000069) MYF6 (ENSCPBG00000000068) PTPRQ (ENSCPBG00000000067) ENSCPBG00000000065 OTOGL (ENSCPBG00000000063) RPS16 (ENSCPBG00000000062) PPP1R12A (ENSCPBG00000000060) PAWR (ENSCPBG00000000059) ENSCPBG00000000058 SYT1 (ENSCPBG00000000057) RNF169 (ENSCPBG00000000056) XRRA1 (ENSCPBG00000000055) SPCS2 (ENSCPBG00000000054) ENSCPBG00000000053 #22 ENSCPBG00000000052 #22 P4HA3 (ENSCPBG00000000051) PPME1 (ENSCPBG00000000050) C2CD3 (ENSCPBG00000000049) UCP3 (ENSCPBG00000000048) UCP2 (ENSCPBG00000000047) DNAJB13 (ENSCPBG00000000046) PAAF1 (ENSCPBG00000000045) COA4 (ENSCPBG00000000044) MRPL48 (ENSCPBG00000000043) RAB6A (ENSCPBG00000000041) PLEKHB1 (ENSCPBG00000000040) Emydidae ANCESTRAL SPECIES ENSGT00950000182944.A.h #22 painted turtle DUPLICATION painted turtle MODERN SPECIES 638 ENSCPBG00000004490 #22 painted turtle MODERN SPECIES 861 GRIA4 (ENSCPBG00000000236) MSANTD4 (ENSCPBG00000000207) KBTBD3 (ENSCPBG00000000200) AASDHPPT (ENSCPBG00000000192) GUCY1A2 (ENSCPBG00000000172) ENSCPBG00000000165 ENSCPBG00000000158 ENSCPBG00000000143 CWF19L2 (ENSCPBG00000018618) ENSCPBG00000018615 ALKBH8 (ENSCPBG00000018611) ELMOD1 (ENSCPBG00000018597) SLC35F2 (ENSCPBG00000018586) ENSCPBG00000018584 #22 RAB39A (ENSCPBG00000018580) CUL5 (ENSCPBG00000018575) ACAT1 (ENSCPBG00000018563) NPAT (ENSCPBG00000018558) Testudinidae DUPLICATION Testudinidae ANCESTRAL SPECIES ENSGT00390000015701 ENSGT00940000162049.b ENSGT00940000162049.a ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353.a ENSGT00940000155001.B.c ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A.j #22 ENSGT00950000182944.A.i #22 ENSGT00940000158967.a ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES WDR73 (ENSGEVG00005002815) ENSGEVG00005002824 ENSGEVG00005002835 SLCO2B1 (ENSGEVG00005002871) ENSGEVG00005003019 PGM2L1 (ENSGEVG00005003082) KCNE3 (ENSGEVG00005003093) LIPT2 (ENSGEVG00005003105) ENSGEVG00005003114 CHRDL2 (ENSGEVG00005003144) RNF169 (ENSGEVG00005003164) XRRA1 (ENSGEVG00005003181) SPCS2 (ENSGEVG00005003194) ENSGEVG00005003212 #22 ENSGEVG00005003243 #22 ENSGEVG00005003260 #22 P4HA3 (ENSGEVG00005003275) PPME1 (ENSGEVG00005003302) C2CD3 (ENSGEVG00005003360) UCP3 (ENSGEVG00005003456) UCP2 (ENSGEVG00005003468) DNAJB13 (ENSGEVG00005003477) PAAF1 (ENSGEVG00005003484) COA4 (ENSGEVG00005003493) MRPL48 (ENSGEVG00005003500) RAB6A (ENSGEVG00005000003) PLEKHB1 (ENSGEVG00005000004) FAM168A (ENSGEVG00005000014) RELT (ENSGEVG00005000041) ARHGEF17 (ENSGEVG00005000102) P2RY6 (ENSGEVG00005000134) Goode s thornscrub tortoise MODERN SPECIES ARRB1 (ENSGEVG00005002777) WDR73 (ENSGEVG00005002815) ENSGEVG00005002824 ENSGEVG00005002835 SLCO2B1 (ENSGEVG00005002871) ENSGEVG00005003019 PGM2L1 (ENSGEVG00005003082) KCNE3 (ENSGEVG00005003093) LIPT2 (ENSGEVG00005003105) ENSGEVG00005003114 CHRDL2 (ENSGEVG00005003144) RNF169 (ENSGEVG00005003164) XRRA1 (ENSGEVG00005003181) SPCS2 (ENSGEVG00005003194) ENSGEVG00005003212 #22 ENSGEVG00005003243 #22 ENSGEVG00005003260 #22 P4HA3 (ENSGEVG00005003275) PPME1 (ENSGEVG00005003302) C2CD3 (ENSGEVG00005003360) UCP3 (ENSGEVG00005003456) UCP2 (ENSGEVG00005003468) DNAJB13 (ENSGEVG00005003477) PAAF1 (ENSGEVG00005003484) COA4 (ENSGEVG00005003493) MRPL48 (ENSGEVG00005003500) RAB6A (ENSGEVG00005000003) PLEKHB1 (ENSGEVG00005000004) FAM168A (ENSGEVG00005000014) RELT (ENSGEVG00005000041) ARHGEF17 (ENSGEVG00005000102) Abingdon island giant tortoise MODERN SPECIES 780 RNF169 (ENSCABG00000006633) ENSCABG00000006631 ENSCABG00000006630 SPCS2 (ENSCABG00000006629) ENSCABG00000006628 #22 ENSCABG00000006626 #22 ENSCABG00000006625 #22 ENSCABG00000006624 ENSCABG00000006623 PPME1 (ENSCABG00000006621) C2CD3 (ENSCABG00000006584) UCP3 (ENSCABG00000006579) UCP2 (ENSCABG00000006576) DNAJB13 (ENSCABG00000006574) PAAF1 (ENSCABG00000006572) COA4 (ENSCABG00000006569) MRPL48 (ENSCABG00000006557) Testudinidae ANCESTRAL SPECIES ENSGT00950000182887.C.a.b ENSGT00390000015701 ENSGT00940000162049.b ENSGT00940000162049.a ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353.a ENSGT00940000155001.B.c ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00960000189590 ENSGT00440000038181 ENSGT00950000182944.A.j #22 ENSGT00950000182944.A.i #22 ENSGT00940000158967.a ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 780 RNF169 (ENSCABG00000006633) ENSCABG00000006631 ENSCABG00000006630 SPCS2 (ENSCABG00000006629) ENSCABG00000006628 #22 ENSCABG00000006626 #22 ENSCABG00000006625 #22 ENSCABG00000006624 ENSCABG00000006623 PPME1 (ENSCABG00000006621) C2CD3 (ENSCABG00000006584) UCP3 (ENSCABG00000006579) UCP2 (ENSCABG00000006576) DNAJB13 (ENSCABG00000006574) PAAF1 (ENSCABG00000006572) COA4 (ENSCABG00000006569) MRPL48 (ENSCABG00000006557) Abingdon island giant tortoise MODERN SPECIES 780 RNF169 (ENSCABG00000006633) ENSCABG00000006631 ENSCABG00000006630 SPCS2 (ENSCABG00000006629) ENSCABG00000006628 #22 ENSCABG00000006626 #22 ENSCABG00000006625 #22 ENSCABG00000006624 ENSCABG00000006623 PPME1 (ENSCABG00000006621) C2CD3 (ENSCABG00000006584) UCP3 (ENSCABG00000006579) UCP2 (ENSCABG00000006576) DNAJB13 (ENSCABG00000006574) PAAF1 (ENSCABG00000006572) COA4 (ENSCABG00000006569) MRPL48 (ENSCABG00000006557) Goode s thornscrub tortoise MODERN SPECIES ATG16L2 (ENSGEVG00005002742) ARRB1 (ENSGEVG00005002777) WDR73 (ENSGEVG00005002815) ENSGEVG00005002824 ENSGEVG00005002835 SLCO2B1 (ENSGEVG00005002871) ENSGEVG00005003019 PGM2L1 (ENSGEVG00005003082) KCNE3 (ENSGEVG00005003093) LIPT2 (ENSGEVG00005003105) ENSGEVG00005003114 CHRDL2 (ENSGEVG00005003144) RNF169 (ENSGEVG00005003164) XRRA1 (ENSGEVG00005003181) SPCS2 (ENSGEVG00005003194) ENSGEVG00005003212 #22 ENSGEVG00005003243 #22 ENSGEVG00005003260 #22 P4HA3 (ENSGEVG00005003275) PPME1 (ENSGEVG00005003302) C2CD3 (ENSGEVG00005003360) UCP3 (ENSGEVG00005003456) UCP2 (ENSGEVG00005003468) DNAJB13 (ENSGEVG00005003477) PAAF1 (ENSGEVG00005003484) COA4 (ENSGEVG00005003493) MRPL48 (ENSGEVG00005003500) RAB6A (ENSGEVG00005000003) PLEKHB1 (ENSGEVG00005000004) FAM168A (ENSGEVG00005000014) RELT (ENSGEVG00005000041) Chinese turtle MODERN SPECIES 1382 PDE2A (ENSPSIG00000010756) ATG16L2 (ENSPSIG00000014104) ENSPSIG00000014844 WDR73 (ENSPSIG00000015889) ENSPSIG00000001951 SLCO2B1 (ENSPSIG00000016068) ENSPSIG00000001953 PGM2L1 (ENSPSIG00000006425) CHRDL2 (ENSPSIG00000007442) ENSPSIG00000001954 ENSPSIG00000007762 KCNE3 (ENSPSIG00000007921) RNF169 (ENSPSIG00000007937) XRRA1 (ENSPSIG00000008020) SPCS2 (ENSPSIG00000008941) NEU3 (ENSPSIG00000009163) #22 P4HA3 (ENSPSIG00000009301) PPME1 (ENSPSIG00000010276) C2CD3 (ENSPSIG00000010958) UCP3 (ENSPSIG00000011422) UCP2 (ENSPSIG00000012163) DNAJB13 (ENSPSIG00000013400) PAAF1 (ENSPSIG00000013943) COA4 (ENSPSIG00000001956) MRPL48 (ENSPSIG00000014248) RAB6A (ENSPSIG00000014408) PLEKHB1 (ENSPSIG00000014430) Lepidosauria ANCESTRAL SPECIES 17 ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Episquamata DUPLICATION Episquamata DUPLICATION Episquamata DUPLICATION Episquamata ANCESTRAL SPECIES 2 ENSGT00940000159817 ENSGT00390000015701 ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A.k.a.a #22 ENSGT00950000182944.A.k.a.b #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B Toxicofera ANCESTRAL SPECIES 50 ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A.k.a.a #22 ENSGT00950000182944.A.k.a.b #22 ENSGT00940000158967 ENSGT00390000016048 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 Lizard DUPLICATION Lizard MODERN SPECIES 1101 ENSACAG00000014267 ENSACAG00000014221 ENSACAG00000034703 RNF169 (ENSACAG00000014446) ENSACAG00000007411 ENSACAG00000017449 ENSACAG00000027725 ENSACAG00000039218 SPCS2 (ENSACAG00000003877) ENSACAG00000023263 #22 ENSACAG00000025561 #22 ENSACAG00000037556 #22 ENSACAG00000014367 ENSACAG00000014334 Lizard MODERN SPECIES 1101 ENSACAG00000014267 ENSACAG00000014221 ENSACAG00000034703 RNF169 (ENSACAG00000014446) ENSACAG00000007411 ENSACAG00000017449 ENSACAG00000027725 ENSACAG00000039218 SPCS2 (ENSACAG00000003877) ENSACAG00000023263 #22 ENSACAG00000025561 #22 ENSACAG00000037556 #22 ENSACAG00000014367 ENSACAG00000014334 Laterata ANCESTRAL SPECIES 3 ENSGT00390000012961 ENSGT00940000159817 ENSGT00390000015701 ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A.k.a.a #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Common wall lizard MODERN SPECIES 12 ENSPMRG00000001585 ENSPMRG00000001606 ENSPMRG00000001614 ENSPMRG00000001620 ENSPMRG00000001626 ENSPMRG00000001631 PGM2L1 (ENSPMRG00000001634) LIPT2 (ENSPMRG00000001645) ENSPMRG00000001655 ENSPMRG00000001671 CHRDL2 (ENSPMRG00000001688) RNF169 (ENSPMRG00000001729) ENSPMRG00000001750 SPCS2 (ENSPMRG00000001767) ENSPMRG00000001776 #22 ENSPMRG00000001783 #22 P4HA3 (ENSPMRG00000001795) ENSPMRG00000001803 PPME1 (ENSPMRG00000001814) C2CD3 (ENSPMRG00000001853) UCP3 (ENSPMRG00000001986) UCP2 (ENSPMRG00000001994) DNAJB13 (ENSPMRG00000002007) PAAF1 (ENSPMRG00000002025) COA4 (ENSPMRG00000002043) MRPL48 (ENSPMRG00000002053) RAB6A (ENSPMRG00000002071) PLEKHB1 (ENSPMRG00000002089) FAM168A (ENSPMRG00000002098) RELT (ENSPMRG00000002112) ENSPMRG00000002116 Argentine black and white tegu MODERN SPECIES 24 PDE2A (ENSSMRG00000000432) WDR73 (ENSSMRG00000006202) ENSSMRG00000006224 ATG16L2 (ENSSMRG00000006260) ENSSMRG00000006291 ENSSMRG00000006451 PGM2L1 (ENSSMRG00000006461) ENSSMRG00000006475 KCNE3 (ENSSMRG00000006477) LIPT2 (ENSSMRG00000006478) ENSSMRG00000006481 CHRDL2 (ENSSMRG00000006488) RNF169 (ENSSMRG00000006509) ENSSMRG00000006511 SPCS2 (ENSSMRG00000006523) ENSSMRG00000006532 #22 ENSSMRG00000006537 #22 ENSSMRG00000006541 P4HA3 (ENSSMRG00000006543) PPME1 (ENSSMRG00000006548) C2CD3 (ENSSMRG00000006557) UCP3 (ENSSMRG00000006611) UCP2 (ENSSMRG00000006716) DNAJB13 (ENSSMRG00000006727) PAAF1 (ENSSMRG00000006730) COA4 (ENSSMRG00000006735) MRPL48 (ENSSMRG00000006743) RAB6A (ENSSMRG00000006746) PLEKHB1 (ENSSMRG00000006749) FAM168A (ENSSMRG00000006776) RELT (ENSSMRG00000006804) Episquamata ANCESTRAL SPECIES 2 ENSGT00390000015701 ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000162049 ENSGT01080000257336.a.c.a ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000161241 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A.k.a.a #22 ENSGT00950000182944.A.k.a.b #22 ENSGT00940000158967 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b Toxicofera ANCESTRAL SPECIES 50 ENSGT00940000154868.b ENSGT00940000158353 ENSGT00940000155001.B ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A.k.a.a #22 ENSGT00950000182944.A.k.a.b #22 ENSGT00940000158967 ENSGT00390000016048 ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B Elapidae ANCESTRAL SPECIES 52 ENSGT01080000257336.a.c.a ENSGT00940000162049 ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT00950000182944.A.k.a.b #22 ENSGT00950000182944.A.l.a #22 ENSGT00940000158967.f ENSGT00940000158967.e ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524.k.b ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955.k.a ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 Indian cobra MODERN SPECIES 4 INPPL1 (ENSNNAG00000010722) PHOX2A (ENSNNAG00000010655) CLPB (ENSNNAG00000009815) STARD10 (ENSNNAG00000009731) ENSNNAG00000009679 ENSNNAG00000009619 SPCS2 (ENSNNAG00000009593) RNF169 (ENSNNAG00000009533) ENSNNAG00000009517 LIPT2 (ENSNNAG00000009503) KCNE3 (ENSNNAG00000009495) ENSNNAG00000009314 ENSNNAG00000009293 ENSNNAG00000009282 ARRB1 (ENSNNAG00000009211) ENSNNAG00000009172 #22 ENSNNAG00000009147 #22 ENSNNAG00000009133 ENSNNAG00000009108 PPME1 (ENSNNAG00000009058) UCP3 (ENSNNAG00000008795) UCP2 (ENSNNAG00000008758) DNAJB13 (ENSNNAG00000008717) PAAF1 (ENSNNAG00000008661) COA4 (ENSNNAG00000008652) MRPL48 (ENSNNAG00000008628) RAB6A (ENSNNAG00000008615) PLEKHB1 (ENSNNAG00000008532) FAM168A (ENSNNAG00000008512) RELT (ENSNNAG00000008426) ARHGEF17 (ENSNNAG00000008336) Elapidae_a ANCESTRAL SPECIES 138 ENSGT01080000257336.a.c.a ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT00950000182944.A.k.a.b #22 ENSGT00940000158967.f ENSGT00940000158967.e ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000159524.k.b ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955.k.a ENSGT00940000154769 ENSGT00390000013989.b Acanthophiinae ANCESTRAL SPECIES 126 ENSGT01080000257336.a.c.a ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT00950000182944.A.k.a.b #22 ENSGT00940000158967.f ENSGT00940000158967.e ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000159524.k.b ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955.k.a ENSGT00940000154769 ENSGT00390000013989.b Mainland tiger snake MODERN SPECIES 1358 ENSNSUG00000011561 #22 Eastern brown snake MODERN SPECIES 237 ENSPTXG00000018732 ATG16L2 (ENSPTXG00000018734) ENSPTXG00000018736 NEU3 (ENSPTXG00000018768) #22 ENSPTXG00000018769 PPME1 (ENSPTXG00000018770) ENSPTXG00000018771 Blue-lipped sea krait MODERN SPECIES 3815 ENSLLTG00000008154 #22 ENSLLTG00000008195 #22 Lizard MODERN SPECIES 1101 ENSACAG00000014267 ENSACAG00000014221 ENSACAG00000034703 RNF169 (ENSACAG00000014446) ENSACAG00000007411 ENSACAG00000017449 ENSACAG00000027725 ENSACAG00000039218 SPCS2 (ENSACAG00000003877) ENSACAG00000023263 #22 ENSACAG00000025561 #22 ENSACAG00000037556 #22 ENSACAG00000014367 ENSACAG00000014334 Laterata ANCESTRAL SPECIES ENSGT00950000182944.A.k.a.b #22 Argentine black and white tegu MODERN SPECIES 24 WDR73 (ENSSMRG00000006202) ENSSMRG00000006224 ATG16L2 (ENSSMRG00000006260) ENSSMRG00000006291 ENSSMRG00000006451 PGM2L1 (ENSSMRG00000006461) ENSSMRG00000006475 KCNE3 (ENSSMRG00000006477) LIPT2 (ENSSMRG00000006478) ENSSMRG00000006481 CHRDL2 (ENSSMRG00000006488) RNF169 (ENSSMRG00000006509) ENSSMRG00000006511 SPCS2 (ENSSMRG00000006523) ENSSMRG00000006532 #22 ENSSMRG00000006537 #22 ENSSMRG00000006541 P4HA3 (ENSSMRG00000006543) PPME1 (ENSSMRG00000006548) C2CD3 (ENSSMRG00000006557) UCP3 (ENSSMRG00000006611) UCP2 (ENSSMRG00000006716) DNAJB13 (ENSSMRG00000006727) PAAF1 (ENSSMRG00000006730) COA4 (ENSSMRG00000006735) MRPL48 (ENSSMRG00000006743) RAB6A (ENSSMRG00000006746) PLEKHB1 (ENSSMRG00000006749) FAM168A (ENSSMRG00000006776) RELT (ENSSMRG00000006804) ARHGEF17 (ENSSMRG00000006829) Episquamata ANCESTRAL SPECIES ENSGT00950000182944.A.k.b #22 Laterata ANCESTRAL SPECIES ENSGT00950000182944.A.k.b #22 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 12 ATG16L2 (ENSPMRG00000001532) ENSPMRG00000001585 ENSPMRG00000001606 ENSPMRG00000001614 ENSPMRG00000001620 ENSPMRG00000001626 ENSPMRG00000001631 PGM2L1 (ENSPMRG00000001634) LIPT2 (ENSPMRG00000001645) ENSPMRG00000001655 ENSPMRG00000001671 CHRDL2 (ENSPMRG00000001688) RNF169 (ENSPMRG00000001729) ENSPMRG00000001750 SPCS2 (ENSPMRG00000001767) ENSPMRG00000001776 #22 ENSPMRG00000001783 #22 P4HA3 (ENSPMRG00000001795) ENSPMRG00000001803 PPME1 (ENSPMRG00000001814) C2CD3 (ENSPMRG00000001853) UCP3 (ENSPMRG00000001986) UCP2 (ENSPMRG00000001994) DNAJB13 (ENSPMRG00000002007) PAAF1 (ENSPMRG00000002025) COA4 (ENSPMRG00000002043) MRPL48 (ENSPMRG00000002053) RAB6A (ENSPMRG00000002071) PLEKHB1 (ENSPMRG00000002089) FAM168A (ENSPMRG00000002098) RELT (ENSPMRG00000002112) Common wall lizard MODERN SPECIES 10 CCNJL (ENSPMRG00000010868) C1QTNF2 (ENSPMRG00000010872) SLU7 (ENSPMRG00000010877) ENSPMRG00000010883 ATP10B (ENSPMRG00000010905) GABRB2 (ENSPMRG00000011033) GABRA6 (ENSPMRG00000011045) GABRA1 (ENSPMRG00000011054) GABRG2 (ENSPMRG00000011060) ENSPMRG00000011068 CCNG1 (ENSPMRG00000011071) ENSPMRG00000011075 HMMR (ENSPMRG00000011083) MAT2B (ENSPMRG00000011087) ENSPMRG00000011090 ENSPMRG00000011093 #22 ENSPMRG00000011099 TENM2 (ENSPMRG00000011366) WWC1 (ENSPMRG00000013365) RARS1 (ENSPMRG00000013382) ENSPMRG00000013393 SLIT3 (ENSPMRG00000013418) ENSPMRG00000013439 SPDL1 (ENSPMRG00000013445) DOCK2 (ENSPMRG00000013635) INSYN2B (ENSPMRG00000014634) FOXI1 (ENSPMRG00000014639) ENSPMRG00000014643 ENSPMRG00000014648 KCNMB1 (ENSPMRG00000014652) KCNIP1 (ENSPMRG00000014664) Episquamata ANCESTRAL SPECIES ENSGT00950000182944.A.l #22 Toxicofera ANCESTRAL SPECIES ENSGT00950000182944.A.l #22 Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 52 ENSGT01080000257336.a.c.a ENSGT00940000162049 ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT00950000182944.A.k.a.b #22 ENSGT00950000182944.A.l.a #22 ENSGT00940000158967.f ENSGT00940000158967.e ENSGT00390000004396 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524.k.b ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955.k.a ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B Elapidae_a ANCESTRAL SPECIES ENSGT00950000182944.A.l.a #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00950000182944.A.l.a #22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2080 ENSNSUG00000001745 #22 Mainland tiger snake MODERN SPECIES 2796 ENSNSUG00000004257 #22 Blue-lipped sea krait MODERN SPECIES 3815 ENSLLTG00000008154 #22 ENSLLTG00000008195 #22 Indian cobra MODERN SPECIES 4 PHOX2A (ENSNNAG00000010655) CLPB (ENSNNAG00000009815) STARD10 (ENSNNAG00000009731) ENSNNAG00000009679 ENSNNAG00000009619 SPCS2 (ENSNNAG00000009593) RNF169 (ENSNNAG00000009533) ENSNNAG00000009517 LIPT2 (ENSNNAG00000009503) KCNE3 (ENSNNAG00000009495) ENSNNAG00000009314 ENSNNAG00000009293 ENSNNAG00000009282 ARRB1 (ENSNNAG00000009211) ENSNNAG00000009172 #22 ENSNNAG00000009147 #22 ENSNNAG00000009133 ENSNNAG00000009108 PPME1 (ENSNNAG00000009058) UCP3 (ENSNNAG00000008795) UCP2 (ENSNNAG00000008758) DNAJB13 (ENSNNAG00000008717) PAAF1 (ENSNNAG00000008661) COA4 (ENSNNAG00000008652) MRPL48 (ENSNNAG00000008628) RAB6A (ENSNNAG00000008615) PLEKHB1 (ENSNNAG00000008532) FAM168A (ENSNNAG00000008512) RELT (ENSNNAG00000008426) ARHGEF17 (ENSNNAG00000008336) P2RY6 (ENSNNAG00000008304) Elapidae ANCESTRAL SPECIES ENSGT00950000182944.A.l.b #22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000182944.A.l.b #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00950000182944.A.l.b #22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2325 ENSNSUG00000004628 #22 Mainland tiger snake MODERN SPECIES 2306 ENSNSUG00000004549 #22 Blue-lipped sea krait MODERN SPECIES 10915 ENSLLTG00000006568 #22 P4HA3 (ENSLLTG00000006459) tuatara MODERN SPECIES 417 RNF169 (ENSSPUG00000014623) ENSSPUG00000014632 SPCS2 (ENSSPUG00000014638) NEU3 (ENSSPUG00000014640) #22 P4HA3 (ENSSPUG00000014679) PPME1 (ENSSPUG00000014940) C2CD3 (ENSSPUG00000015051) UCP3 (ENSSPUG00000015436) Anura ANCESTRAL SPECIES 582 ENSGT00950000182944.A #22 ENSGT00390000015701 Frog MODERN SPECIES 2 ENSXETG00000039177 ENSXETG00000033914 ENSXETG00000037050 ENSXETG00000030197 ENSXETG00000037004 znf205 (ENSXETG00000040298) paaf1 (ENSXETG00000037400) ENSXETG00000039329 znf300 (ENSXETG00000020215) ENSXETG00000033454 ENSXETG00000045166 ENSXETG00000030182 ENSXETG00000036820 ENSXETG00000047854 ENSXETG00000038808 neu3.1 (ENSXETG00000003807) #22 neu3.2 (ENSXETG00000040494) ##22 neu3.3 (ENSXETG00000033668) ##22 wdr73 (ENSXETG00000020233) piwil3 (ENSXETG00000040700) ENSXETG00000036946 ENSXETG00000034138 ENSXETG00000048772 p4ha3 (ENSXETG00000042611) ppme1 (ENSXETG00000012561) c2cd3 (ENSXETG00000012560) ENSXETG00000046455 ucp3 (ENSXETG00000034740) ucp2 (ENSXETG00000026447) dnajb13 (ENSXETG00000012541) znf16 (ENSXETG00000042445) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000002753 ENSLLEG00000002762 P4HA3 (ENSLLEG00000002785) PPME1 (ENSLLEG00000002870) ENSLLEG00000002978 RPL31 (ENSLLEG00000003035) KCNE3 (ENSLLEG00000003056) LIPT2 (ENSLLEG00000003081) ENSLLEG00000003101 ENSLLEG00000003107 CHRDL2 (ENSLLEG00000003113) ENSLLEG00000003139 RNF169 (ENSLLEG00000003192) XRRA1 (ENSLLEG00000003211) ENSLLEG00000003281 NEU3 (ENSLLEG00000003294) #22 ENSLLEG00000003327 ENSLLEG00000003335 ##22 ENSLLEG00000003345 ENSLLEG00000003395 RSF1 (ENSLLEG00000003406) ENSLLEG00000003432 CLNS1A (ENSLLEG00000003456) AQP11 (ENSLLEG00000003475) PICALM (ENSLLEG00000003542) ENSLLEG00000003726 EED (ENSLLEG00000003752) ENSLLEG00000003796 MOCS3 (ENSLLEG00000003803) CCDC81 (ENSLLEG00000003829) ENSLLEG00000003887 Coelacanth MODERN SPECIES 2960 spcs2 (ENSLACG00000005332) NEU3 (ENSLACG00000004669) #22 Actinopterygii ANCESTRAL SPECIES 26 ENSGT00940000174692 ENSGT00940000159817 ENSGT00940000175321 ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT01100000263522.A ENSGT01100000263522.B.a ENSGT01100000263522.B.b ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000166571 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00390000015701 ENSGT00930000151482 ENSGT00390000012905 ENSGT00550000074980 ENSGT00940000159028 ENSGT00940000166463 ENSGT00390000010734 ENSGT00940000155053 ENSGT00390000007133 ENSGT00390000004601 ENSGT00940000160633 ENSGT00550000074891 ENSGT00940000156040 ENSGT01030000234646.B.a.b ENSGT00940000163831 Neopterygii ANCESTRAL SPECIES 57 ENSGT00950000182887.C.a.b ENSGT01100000263522.A ENSGT01100000263522.B.a ENSGT01100000263522.B.b ENSGT00940000167612 ENSGT01030000234640.a.a ENSGT00950000183023.A ENSGT00950000183023.B ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000166571 ENSGT00940000153680.b ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00390000015701 ENSGT00940000173470 ENSGT00940000160131 ENSGT00930000151482 ENSGT00390000012905 ENSGT00550000074980 ENSGT00940000159028 ENSGT00940000166463 ENSGT00390000010734 ENSGT00390000004986 ENSGT00940000155053 ENSGT00390000007133 ENSGT00390000004601 ENSGT00940000160633 ENSGT00550000074891 Osteoglossocephalai ANCESTRAL SPECIES 219 ENSGT01100000263522.B.a ENSGT01100000263522.B.b ENSGT00940000167612 ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A ENSGT00950000183023.B ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00960000187097 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00950000182944.A #22 ENSGT00390000015701 ENSGT00650000094922 ENSGT00940000160131 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 513 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00390000015701 Otomorpha ANCESTRAL SPECIES 308 ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000007237.s ENSGT00940000163093.a.a ENSGT00940000161428 ENSGT00940000160457.a ENSGT00940000168097 ENSGT00940000167612.a ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00390000015701 Clupeiformes ANCESTRAL SPECIES 644 ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00950000182944.A.a #22 Atlantic herring MODERN SPECIES 24 fabp6 (ENSCHAG00000012886) slc23a1 (ENSCHAG00000012939) pfdn1 (ENSCHAG00000015113) ENSCHAG00000015132 hnrnph1l (ENSCHAG00000015173) slc9a6b (ENSCHAG00000015324) fhl1b (ENSCHAG00000016125) ENSCHAG00000016137 ENSCHAG00000016221 htatsf1 (ENSCHAG00000016240) ENSCHAG00000016271 tmtops3b (ENSCHAG00000016296) fgf13b (ENSCHAG00000016452) f9b (ENSCHAG00000016496) MCF2 (ENSCHAG00000016562) neu3.1 (ENSCHAG00000016580) #22 rbm41 (ENSCHAG00000016591) trim47 (ENSCHAG00000016599) trim3b (ENSCHAG00000016622) ENSCHAG00000016851 ENSCHAG00000016860 cfap298 (ENSCHAG00000016864) synj1 (ENSCHAG00000016950) SLC46A3 (ENSCHAG00000017815) ENSCHAG00000017829 sod1 (ENSCHAG00000017872) TIAM1 (ENSCHAG00000018070) GRIK1 (ENSCHAG00000018442) bach1b (ENSCHAG00000020662) ENSCHAG00000020667 cct8 (ENSCHAG00000020688) Denticle herring MODERN SPECIES 16 rb1 (ENSDCDG00000013751) ccdc61 (ENSDCDG00000013740) ENSDCDG00000013736 si:ch211-191j22.3 (ENSDCDG00000013734) ENSDCDG00000013718 ppm1nb (ENSDCDG00000013717) rtn2b (ENSDCDG00000013715) nectin3b (ENSDCDG00000013713) ENSDCDG00000013712 b9d2 (ENSDCDG00000013709) cbr1l (ENSDCDG00000013706) defbl1 (ENSDCDG00000013700) ENSDCDG00000013698 pold3 (ENSDCDG00000013696) chrdl2 (ENSDCDG00000013690) neu3.5 (ENSDCDG00000013686) #22 pals1b (ENSDCDG00000013681) ENSDCDG00000013671 pals1b (ENSDCDG00000012372) atp6v1d (ENSDCDG00000012010) rbm25b (ENSDCDG00000011916) hsp90ab1 (ENSDCDG00000008304) elp3 (ENSDCDG00000007728) ENSDCDG00000007706 gphnb (ENSDCDG00000005811) msi2a (ENSDCDG00000005614) ENSDCDG00000005607 ENSDCDG00000005600 dlat (ENSDCDG00000005590) chek1 (ENSDCDG00000005581) ENSDCDG00000005578 Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES 37 ENSGT00940000156028.t ENSGT00390000007237.s ENSGT00940000161428 ENSGT00940000160457.a ENSGT00940000168097 ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h ENSGT00950000183023.B.m.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.f ENSGT00940000156536.e.a.j ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00970000193642 ENSGT00940000159682 ENSGT00940000163088.b ENSGT00940000168885.c Characiphysae ANCESTRAL SPECIES 23 ENSGT00510000046499 ENSGT01100000263522.B.b.l ENSGT00940000167612.b ENSGT00950000183048.b.b.c ENSGT00950000183023.A.g.b ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h ENSGT00950000183023.B.m.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156536.e.a.j ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00990000204705 ENSGT00940000155402.a.b ENSGT00970000193642 ENSGT00940000159682 ENSGT01100000263551.b.b.a.e.a Characiphysae_b ANCESTRAL SPECIES 21 ENSGT00940000167612.b ENSGT00950000183048.b.b.c ENSGT01030000234640.a.a.e ENSGT00950000183023.A.g.b ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h.a.b ENSGT00950000183023.B.m.a ENSGT00950000183023.A.h.a.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156536.e.a.j ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00990000204705 ENSGT00940000155402.a.b ENSGT00970000193642 ENSGT00940000159682 ENSGT00940000163088.b Characoidei ANCESTRAL SPECIES 128 ENSGT00950000183048.b.b.c ENSGT01030000234640.a.a.e ENSGT00950000183023.A.g.b ENSGT00950000183023.A.g.a.b ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h.a.b ENSGT00950000183023.B.m.a ENSGT00950000183023.A.h.a.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156536.e.a.j ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00990000204705 ENSGT00940000155402.a.b ENSGT00970000193642 ENSGT00940000159682 ENSGT00940000163088.b Red-bellied piranha MODERN SPECIES 343 ENSPNAG00000017396 ENSPNAG00000017385 ENSPNAG00000017373 ENSPNAG00000017343 or61a1 (ENSPNAG00000017297) or61c1 (ENSPNAG00000017281) defbl1 (ENSPNAG00000017275) chrdl2 (ENSPNAG00000017261) ENSPNAG00000017212 ENSPNAG00000017139 neu3.1 (ENSPNAG00000017133) #22 ENSPNAG00000017118 neu3.5 (ENSPNAG00000017066) #22 wdr73 (ENSPNAG00000017053) defbl2 (ENSPNAG00000017019) ENSPNAG00000017011 gria4b (ENSPNAG00000003456) elmod1 (ENSPNAG00000016782) CAPN5 (ENSPNAG00000016661) slc35f2 (ENSPNAG00000016587) ENSPNAG00000016576 MYO7A (ENSPNAG00000016536) ENSPNAG00000016308 capslb (ENSPNAG00000016284) il7r (ENSPNAG00000016278) myo5b (ENSPNAG00000016264) cfap53 (ENSPNAG00000016196) chek1 (ENSPNAG00000016155) Channel catfish MODERN SPECIES 11 prf1.9 (ENSIPUG00000008640) prf1.1 (ENSIPUG00000008551) COX6A (ENSIPUG00000008523) ENSIPUG00000008095 ENSIPUG00000008051 ENSIPUG00000008038 elob (ENSIPUG00000008023) Arl6ip1 (ENSIPUG00000007976) Smg1 (ENSIPUG00000007769) clec19a (ENSIPUG00000007735) SYT17 (ENSIPUG00000007642) thoc6 (ENSIPUG00000007615) srrm2 (ENSIPUG00000007551) ENSIPUG00000007492 tspan4b (ENSIPUG00000007479) neu3.5 (ENSIPUG00000007468) #22 ENSIPUG00000007452 hsd3b7 (ENSIPUG00000007436) setd1a (ENSIPUG00000007413) ENSIPUG00000007342 KAT8 (ENSIPUG00000007291) rnf25 (ENSIPUG00000007223) ENSIPUG00000007202 ENSIPUG00000007192 pax10 (ENSIPUG00000007187) rcn3 (ENSIPUG00000007133) nosip (ENSIPUG00000007055) ENSIPUG00000007036 trpm4a (ENSIPUG00000006995) scaf1 (ENSIPUG00000006965) ENSIPUG00000006849 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 54 ENSGT00940000156028.t ENSGT00390000007237.s ENSGT00940000163093.a.a.a.a ENSGT00940000163093.a.a.a.b.a ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428 ENSGT00940000160457.a ENSGT00510000046499.y ENSGT00950000183023.A.h.d.b.b ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a.a #22 ENSGT00950000182944.A.a.a.b #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.f ENSGT00940000156536.e.a.j ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00940000156466 ENSGT00990000204705 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 144 ENSGT00390000007237.s.a ENSGT00940000163093.a.a.a.a ENSGT00940000163093.a.a.a.b.a ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428.e ENSGT00940000160457.a.b ENSGT00950000183048.b.a.d.i ENSGT00950000183023.A.h.c.a.a ENSGT00950000183023.A.h.c.b.a.a.a ENSGT00950000183023.A.h.c.b.b ENSGT00950000183023.A.h.d.b.a.b ENSGT00950000183023.B.m.b.b ENSGT00990000204702.b ENSGT00940000163239.e ENSGT00940000166571.a ENSGT00950000182944.A.a.a.a.a.a #22 ENSGT00950000182944.A.a.a.b.d #22 Cyprininae_a ANCESTRAL SPECIES 89 ENSGT00940000163093.a.a.a.b.a ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428.e ENSGT00940000160457.a.b ENSGT00950000183048.b.a.d.i ENSGT00950000183023.A.h.c.a.a ENSGT00950000183023.A.h.c.b.a.a.a ENSGT00950000183023.A.h.c.b.a.b ENSGT00950000183023.A.h.d.b.a.b ENSGT00950000183023.A.h.d.b.b.a.a.a.b ENSGT00950000183023.A.h.d.b.b.b ENSGT00950000183023.B.m.b.b ENSGT00990000204702.b ENSGT00940000163239.e ENSGT00940000166571.a ENSGT00950000182944.A.a.a.a.a.a #22 ENSGT00950000182944.A.a.a.b.d #22 ENSGT00950000182944.A.a.a.a.b #22 ENSGT00390000015701.g ENSGT00940000155677.b.l ENSGT00940000159782.b.j ENSGT00390000015655.a.m.b.f ENSGT00940000156648.f.a ENSGT00940000156536.e.a.j.b ENSGT00390000009497.a.e ENSGT00940000155350.h.f ENSGT00940000156251.b ENSGT00390000006320.t ENSGT00390000007918.b ENSGT00390000018651.a.g ENSGT00990000204705.a Golden-line barbel MODERN SPECIES 2002 defbl1 (ENSSGRG00000019000) pold3 (ENSSGRG00000019002) chrdl2 (ENSSGRG00000019008) ENSSGRG00000019009 NEU3 (ENSSGRG00000019012) #22 Common carp reference MODERN SPECIES 38 ENSCCRG00000008906 ENSCCRG00000080655 ENSCCRG00000065299 or62b4 (ENSCCRG00000055223) or62b5 (ENSCCRG00000080334) or62a3 (ENSCCRG00000060080) or62a1 (ENSCCRG00000011710) or62a1 (ENSCCRG00000024126) or62a1 (ENSCCRG00000028160) ENSCCRG00000024121 defbl1 (ENSCCRG00000031763) defbl1 (ENSCCRG00000016744) pold3 (ENSCCRG00000041029) ENSCCRG00000067418 chrdl2 (ENSCCRG00000076415) ENSCCRG00000003660 #22 neu3.4 (ENSCCRG00000067519) #22 ENSCCRG00000080549 #22 wdr73 (ENSCCRG00000003680) gria4b (ENSCCRG00000067130) elmod1 (ENSCCRG00000023504) slc35f2 (ENSCCRG00000007018) ENSCCRG00000046721 CAPN5 (ENSCCRG00000017389) MYO7A (ENSCCRG00000050029) GDPD4 (ENSCCRG00000050622) nadk2 (ENSCCRG00000011371) skp2 (ENSCCRG00000069379) lmbrd2b (ENSCCRG00000050645) il7r (ENSCCRG00000063390) myo5b (ENSCCRG00000050749) Cyprininae ANCESTRAL SPECIES 207 ENSGT01080000257533.a ENSGT00610000087474.c ENSGT00940000166868.a.a ENSGT00940000164695.b.b ENSGT00940000160599.q ENSGT00940000156028.t.b ENSGT00390000007237.s.b ENSGT00950000183023.A.h.d.b.a.a.a ENSGT00950000183023.A.h.d.b.a.a.b ENSGT00950000183023.B.m.b.a ENSGT00990000204702.a ENSGT00940000163239.f ENSGT00940000166571.b ENSGT00390000016048 ENSGT00950000182944.A.a.b.a #22 ENSGT00950000182944.A.a.a.a.a.b #22 ENSGT00950000182944.A.a.a.b.c.b #22 ENSGT00390000015701.h ENSGT00650000094922.p ENSGT00940000155677.b.k ENSGT00940000159782.b.i ENSGT00390000015655.a.m.b.e ENSGT00940000156648.f.b ENSGT00940000156536.e.a.j.a ENSGT00390000009497.a.f ENSGT00940000155350.h.e ENSGT00390000006320.s ENSGT00390000007918.a ENSGT00390000018651.a.h ENSGT00940000156466.eb ENSGT00990000204705.b Goldfish MODERN SPECIES 13 rnf180b (ENSCARG00000004098) b9d2 (ENSCARG00000004078) ENSCARG00000004050 cbr1l (ENSCARG00000004022) ENSCARG00000004010 ENSCARG00000004001 ENSCARG00000003996 or62a2 (ENSCARG00000003975) or62a2 (ENSCARG00000003968) or62a3 (ENSCARG00000003948) or62a3 (ENSCARG00000003931) defbl1 (ENSCARG00000003914) pold3 (ENSCARG00000003881) chrdl2 (ENSCARG00000003838) neu3.1 (ENSCARG00000003806) #22 NEU3 (ENSCARG00000070462) #22 defbl2 (ENSCARG00000070461) gria4b (ENSCARG00000070450) elmod1 (ENSCARG00000070445) slc35f2 (ENSCARG00000070444) CUL5 (ENSCARG00000070443) ompb (ENSCARG00000070442) CAPN5 (ENSCARG00000070441) MYO7A (ENSCARG00000070438) nadk2 (ENSCARG00000070436) skp2 (ENSCARG00000070435) lmbrd2b (ENSCARG00000070420) capslb (ENSCARG00000070418) il7r (ENSCARG00000070416) myo5b (ENSCARG00000070339) chek1 (ENSCARG00000070315) Cyprininae_a ANCESTRAL SPECIES 33 ENSGT00940000156028.t.b ENSGT00390000007237.s.b ENSGT00940000163093.a.a.b ENSGT00940000161428.f ENSGT00940000160457.a.a ENSGT00940000168097 ENSGT00950000183048.b.a.d.j ENSGT00950000183023.A.h.d.b.a.a.a ENSGT00950000183023.A.h.d.b.a.a.b ENSGT00950000183023.B.m.b.a ENSGT00990000204702.a ENSGT00940000163239.f ENSGT00940000166571.b ENSGT00390000016048 ENSGT00950000182944.A.a.b.a #22 ENSGT00950000182944.A.a.a.a.a.b #22 ENSGT00950000182944.A.a.a.b.c.b #22 ENSGT00390000015701.h ENSGT00650000094922.p ENSGT00940000155677.b.k ENSGT00940000159782.b.i ENSGT00390000015655.a.m.b.e ENSGT00940000156648.f.b ENSGT00940000156536.e.a.j.a ENSGT00390000009497.a.f ENSGT00940000155350.h.e ENSGT00390000006320.s ENSGT00390000007918.a ENSGT00390000018651.a.h ENSGT00940000156466.eb ENSGT00990000204705.b Common carp reference MODERN SPECIES 45 b9d2 (ENSCCRG00000063478) ENSCCRG00000008975 cbr1l (ENSCCRG00000056610) ENSCCRG00000034010 or62a3 (ENSCCRG00000053349) or62a3 (ENSCCRG00000009341) or62a3 (ENSCCRG00000063021) ENSCCRG00000062614 or62a3 (ENSCCRG00000069479) ENSCCRG00000037328 defbl1 (ENSCCRG00000037329) pold3 (ENSCCRG00000037335) chrdl2 (ENSCCRG00000063343) ENSCCRG00000037448 neu3.1 (ENSCCRG00000054230) #22 ENSCCRG00000037233 #22 defbl2 (ENSCCRG00000062722) gria4b (ENSCCRG00000064152) elmod1 (ENSCCRG00000060203) slc35f2 (ENSCCRG00000025636) ENSCCRG00000071860 ENSCCRG00000049995 ompb (ENSCCRG00000077840) ENSCCRG00000017754 nadk2 (ENSCCRG00000050625) skp2 (ENSCCRG00000059949) lmbrd2b (ENSCCRG00000011451) capslb (ENSCCRG00000061757) il7r (ENSCCRG00000056341) ENSCCRG00000055703 myo5b (ENSCCRG00000012479) Golden-line barbel MODERN SPECIES 343 or62a2 (ENSSGRG00000044819) pold3 (ENSSGRG00000044820) chrdl2 (ENSSGRG00000044822) NEU3 (ENSSGRG00000044824) #22 ENSSGRG00000044825 #22 wdr73 (ENSSGRG00000044827) defbl2 (ENSSGRG00000044829) gria4b (ENSSGRG00000044952) elmod1 (ENSSGRG00000048337) slc35f2 (ENSSGRG00000048338) CUL5 (ENSSGRG00000048342) CAPN5 (ENSSGRG00000048363) ompb (ENSSGRG00000048373) MYO7A (ENSSGRG00000048382) nadk2 (ENSSGRG00000048405) skp2 (ENSSGRG00000048412) lmbrd2b (ENSSGRG00000048422) capslb (ENSSGRG00000048599) il7r (ENSSGRG00000048600) Cyprininae ANCESTRAL SPECIES 201 ENSGT00950000182944.A.a.a.a.b #22 ENSGT00390000015701.g ENSGT00940000155677.b.l ENSGT00940000159782.b.j ENSGT00390000015655.a.m.b.f ENSGT00940000156648.f.a ENSGT00940000156536.e.a.j.b ENSGT00390000009497.a.e ENSGT00940000155350.h.f ENSGT00940000156251.b ENSGT00390000006320.t ENSGT00390000007918.b ENSGT00390000018651.a.g ENSGT00990000204705.a ENSGT00940000155402.a.b.e.b ENSGT00970000193642 Cyprininae_a ANCESTRAL SPECIES 89 ENSGT00940000161428.e ENSGT00940000160457.a.b ENSGT00950000183048.b.a.d.i ENSGT00950000183023.A.h.c.a.a ENSGT00950000183023.A.h.c.b.a.a.a ENSGT00950000183023.A.h.c.b.a.b ENSGT00950000183023.A.h.d.b.a.b ENSGT00950000183023.A.h.d.b.b.a.a.a.b ENSGT00950000183023.A.h.d.b.b.b ENSGT00950000183023.B.m.b.b ENSGT00990000204702.b ENSGT00940000163239.e ENSGT00940000166571.a ENSGT00950000182944.A.a.a.a.a.a #22 ENSGT00950000182944.A.a.a.b.d #22 ENSGT00950000182944.A.a.a.a.b #22 ENSGT00390000015701.g ENSGT00940000155677.b.l ENSGT00940000159782.b.j ENSGT00390000015655.a.m.b.f ENSGT00940000156648.f.a ENSGT00940000156536.e.a.j.b ENSGT00390000009497.a.e ENSGT00940000155350.h.f ENSGT00940000156251.b ENSGT00390000006320.t ENSGT00390000007918.b ENSGT00390000018651.a.g ENSGT00990000204705.a ENSGT00940000155402.a.b.e.b Common carp reference MODERN SPECIES 38 ENSCCRG00000065299 or62b4 (ENSCCRG00000055223) or62b5 (ENSCCRG00000080334) or62a3 (ENSCCRG00000060080) or62a1 (ENSCCRG00000011710) or62a1 (ENSCCRG00000024126) or62a1 (ENSCCRG00000028160) ENSCCRG00000024121 defbl1 (ENSCCRG00000031763) defbl1 (ENSCCRG00000016744) pold3 (ENSCCRG00000041029) ENSCCRG00000067418 chrdl2 (ENSCCRG00000076415) ENSCCRG00000003660 #22 neu3.4 (ENSCCRG00000067519) #22 ENSCCRG00000080549 #22 wdr73 (ENSCCRG00000003680) gria4b (ENSCCRG00000067130) elmod1 (ENSCCRG00000023504) slc35f2 (ENSCCRG00000007018) ENSCCRG00000046721 CAPN5 (ENSCCRG00000017389) MYO7A (ENSCCRG00000050029) GDPD4 (ENSCCRG00000050622) nadk2 (ENSCCRG00000011371) skp2 (ENSCCRG00000069379) lmbrd2b (ENSCCRG00000050645) il7r (ENSCCRG00000063390) myo5b (ENSCCRG00000050749) ENSCCRG00000070030 nectin1a (ENSCCRG00000022764) Golden-line barbel MODERN SPECIES 2489 NEU3 (ENSSGRG00000013128) #22 wdr73 (ENSSGRG00000013129) Goldfish MODERN SPECIES 40 ENSCARG00000037383 or62b3 (ENSCARG00000037401) or62a1 (ENSCARG00000037435) or62a1 (ENSCARG00000037468) or62a1 (ENSCARG00000037484) or62a1 (ENSCARG00000037505) or62a1 (ENSCARG00000037515) ENSCARG00000037556 ENSCARG00000037594 defbl1 (ENSCARG00000037610) pold3 (ENSCARG00000037652) chrdl2 (ENSCARG00000037905) ENSCARG00000037976 neu3.1 (ENSCARG00000038003) #22 NEU3 (ENSCARG00000038008) #22 NEU3 (ENSCARG00000038028) #22 NEU3 (ENSCARG00000038041) #22 wdr73 (ENSCARG00000038059) gria4b (ENSCARG00000038091) elmod1 (ENSCARG00000038454) slc35f2 (ENSCARG00000038502) CUL5 (ENSCARG00000038536) CAPN5 (ENSCARG00000024584) ompb (ENSCARG00000025699) MYO7A (ENSCARG00000025821) ENSCARG00000029274 nadk2 (ENSCARG00000029310) skp2 (ENSCARG00000029482) lmbrd2b (ENSCARG00000029545) il7r (ENSCARG00000029729) myo5b (ENSCARG00000029808) Zebrafish DUPLICATION Zebrafish MODERN SPECIES 13 or62b1 (ENSDARG00000092577) or62b4 (ENSDARG00000105729) or62b3 (ENSDARG00000095417) or62b5 (ENSDARG00000105706) or62a1 (ENSDARG00000094714) or62a3 (ENSDARG00000093856) or61a1 (ENSDARG00000092558) or61c2 (ENSDARG00000092707) or61c1 (ENSDARG00000094326) ENSDARG00000096264 defbl1 (ENSDARG00000075161) pold3 (ENSDARG00000076169) chrdl2 (ENSDARG00000078916) ENSDARG00000089578 neu3.1 (ENSDARG00000096382) #22 neu3.2 (ENSDARG00000010047) #22 neu3.3 (ENSDARG00000058327) #22 neu3.4 (ENSDARG00000096381) #22 neu3.5 (ENSDARG00000096368) #22 wdr73 (ENSDARG00000023152) defbl2 (ENSDARG00000096380) gria4b (ENSDARG00000059368) elmod1 (ENSDARG00000062056) slc35f2 (ENSDARG00000069745) CUL5 (ENSDARG00000004260) CAPN5 (ENSDARG00000069748) ompb (ENSDARG00000032380) MYO7A (ENSDARG00000044632) ENSDARG00000079293 nadk2 (ENSDARG00000007181) skp2 (ENSDARG00000004937) Zebrafish MODERN SPECIES 13 or62b5 (ENSDARG00000105706) or62a1 (ENSDARG00000094714) or62a3 (ENSDARG00000093856) or61a1 (ENSDARG00000092558) or61c2 (ENSDARG00000092707) or61c1 (ENSDARG00000094326) ENSDARG00000096264 defbl1 (ENSDARG00000075161) pold3 (ENSDARG00000076169) chrdl2 (ENSDARG00000078916) ENSDARG00000089578 neu3.1 (ENSDARG00000096382) #22 neu3.2 (ENSDARG00000010047) #22 neu3.3 (ENSDARG00000058327) #22 neu3.4 (ENSDARG00000096381) #22 neu3.5 (ENSDARG00000096368) #22 wdr73 (ENSDARG00000023152) defbl2 (ENSDARG00000096380) gria4b (ENSDARG00000059368) elmod1 (ENSDARG00000062056) slc35f2 (ENSDARG00000069745) CUL5 (ENSDARG00000004260) CAPN5 (ENSDARG00000069748) ompb (ENSDARG00000032380) MYO7A (ENSDARG00000044632) ENSDARG00000079293 nadk2 (ENSDARG00000007181) skp2 (ENSDARG00000004937) ENSDARG00000093126 lmbrd2b (ENSDARG00000017312) capslb (ENSDARG00000003414) Cyprinoidei ANCESTRAL SPECIES 54 ENSGT00390000007237.s ENSGT00940000163093.a.a.a.a ENSGT00940000163093.a.a.a.b.a ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428 ENSGT00940000160457.a ENSGT00510000046499.y ENSGT00950000183023.A.h.d.b.b ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a.a #22 ENSGT00950000182944.A.a.a.b #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.f ENSGT00940000156536.e.a.j ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00940000156466 ENSGT00990000204705 ENSGT00940000155402.a.b.e Zebrafish DUPLICATION Zebrafish MODERN SPECIES 13 or62b4 (ENSDARG00000105729) or62b3 (ENSDARG00000095417) or62b5 (ENSDARG00000105706) or62a1 (ENSDARG00000094714) or62a3 (ENSDARG00000093856) or61a1 (ENSDARG00000092558) or61c2 (ENSDARG00000092707) or61c1 (ENSDARG00000094326) ENSDARG00000096264 defbl1 (ENSDARG00000075161) pold3 (ENSDARG00000076169) chrdl2 (ENSDARG00000078916) ENSDARG00000089578 neu3.1 (ENSDARG00000096382) #22 neu3.2 (ENSDARG00000010047) #22 neu3.3 (ENSDARG00000058327) #22 neu3.4 (ENSDARG00000096381) #22 neu3.5 (ENSDARG00000096368) #22 wdr73 (ENSDARG00000023152) defbl2 (ENSDARG00000096380) gria4b (ENSDARG00000059368) elmod1 (ENSDARG00000062056) slc35f2 (ENSDARG00000069745) CUL5 (ENSDARG00000004260) CAPN5 (ENSDARG00000069748) ompb (ENSDARG00000032380) MYO7A (ENSDARG00000044632) ENSDARG00000079293 nadk2 (ENSDARG00000007181) skp2 (ENSDARG00000004937) ENSDARG00000093126 Zebrafish MODERN SPECIES 13 or62b3 (ENSDARG00000095417) or62b5 (ENSDARG00000105706) or62a1 (ENSDARG00000094714) or62a3 (ENSDARG00000093856) or61a1 (ENSDARG00000092558) or61c2 (ENSDARG00000092707) or61c1 (ENSDARG00000094326) ENSDARG00000096264 defbl1 (ENSDARG00000075161) pold3 (ENSDARG00000076169) chrdl2 (ENSDARG00000078916) ENSDARG00000089578 neu3.1 (ENSDARG00000096382) #22 neu3.2 (ENSDARG00000010047) #22 neu3.3 (ENSDARG00000058327) #22 neu3.4 (ENSDARG00000096381) #22 neu3.5 (ENSDARG00000096368) #22 wdr73 (ENSDARG00000023152) defbl2 (ENSDARG00000096380) gria4b (ENSDARG00000059368) elmod1 (ENSDARG00000062056) slc35f2 (ENSDARG00000069745) CUL5 (ENSDARG00000004260) CAPN5 (ENSDARG00000069748) ompb (ENSDARG00000032380) MYO7A (ENSDARG00000044632) ENSDARG00000079293 nadk2 (ENSDARG00000007181) skp2 (ENSDARG00000004937) ENSDARG00000093126 lmbrd2b (ENSDARG00000017312) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1892 ENSGT00950000182944.A.a.b.b #22 ENSGT00950000182944.A.a.a.b.c.a #22 Goldfish MODERN SPECIES 40 ENSCARG00000037363 ENSCARG00000037383 or62b3 (ENSCARG00000037401) or62a1 (ENSCARG00000037435) or62a1 (ENSCARG00000037468) or62a1 (ENSCARG00000037484) or62a1 (ENSCARG00000037505) or62a1 (ENSCARG00000037515) ENSCARG00000037556 ENSCARG00000037594 defbl1 (ENSCARG00000037610) pold3 (ENSCARG00000037652) chrdl2 (ENSCARG00000037905) ENSCARG00000037976 neu3.1 (ENSCARG00000038003) #22 NEU3 (ENSCARG00000038008) #22 NEU3 (ENSCARG00000038028) #22 NEU3 (ENSCARG00000038041) #22 wdr73 (ENSCARG00000038059) gria4b (ENSCARG00000038091) elmod1 (ENSCARG00000038454) slc35f2 (ENSCARG00000038502) CUL5 (ENSCARG00000038536) CAPN5 (ENSCARG00000024584) ompb (ENSCARG00000025699) MYO7A (ENSCARG00000025821) ENSCARG00000029274 nadk2 (ENSCARG00000029310) skp2 (ENSCARG00000029482) lmbrd2b (ENSCARG00000029545) il7r (ENSCARG00000029729) Cyprininae_a ANCESTRAL SPECIES ENSGT00950000182944.A.a.a.b.c.a #22 Golden-line barbel MODERN SPECIES 4373 ENSSGRG00000001961 #22 Cyprininae ANCESTRAL SPECIES 207 ENSGT00610000087474.c ENSGT00940000166868.a.a ENSGT00940000164695.b.b ENSGT00940000160599.q ENSGT00940000156028.t.b ENSGT00390000007237.s.b ENSGT00950000183023.A.h.d.b.a.a.a ENSGT00950000183023.A.h.d.b.a.a.b ENSGT00950000183023.B.m.b.a ENSGT00990000204702.a ENSGT00940000163239.f ENSGT00940000166571.b ENSGT00390000016048 ENSGT00950000182944.A.a.b.a #22 ENSGT00950000182944.A.a.a.a.a.b #22 ENSGT00950000182944.A.a.a.b.c.b #22 ENSGT00390000015701.h ENSGT00650000094922.p ENSGT00940000155677.b.k ENSGT00940000159782.b.i ENSGT00390000015655.a.m.b.e ENSGT00940000156648.f.b ENSGT00940000156536.e.a.j.a ENSGT00390000009497.a.f ENSGT00940000155350.h.e ENSGT00390000006320.s ENSGT00390000007918.a ENSGT00390000018651.a.h ENSGT00940000156466.eb ENSGT00990000204705.b ENSGT00940000155402.a.b.e.a Goldfish MODERN SPECIES 40 or62b3 (ENSCARG00000037401) or62a1 (ENSCARG00000037435) or62a1 (ENSCARG00000037468) or62a1 (ENSCARG00000037484) or62a1 (ENSCARG00000037505) or62a1 (ENSCARG00000037515) ENSCARG00000037556 ENSCARG00000037594 defbl1 (ENSCARG00000037610) pold3 (ENSCARG00000037652) chrdl2 (ENSCARG00000037905) ENSCARG00000037976 neu3.1 (ENSCARG00000038003) #22 NEU3 (ENSCARG00000038008) #22 NEU3 (ENSCARG00000038028) #22 NEU3 (ENSCARG00000038041) #22 wdr73 (ENSCARG00000038059) gria4b (ENSCARG00000038091) elmod1 (ENSCARG00000038454) slc35f2 (ENSCARG00000038502) CUL5 (ENSCARG00000038536) CAPN5 (ENSCARG00000024584) ompb (ENSCARG00000025699) MYO7A (ENSCARG00000025821) ENSCARG00000029274 nadk2 (ENSCARG00000029310) skp2 (ENSCARG00000029482) lmbrd2b (ENSCARG00000029545) il7r (ENSCARG00000029729) myo5b (ENSCARG00000029808) cfap53 (ENSCARG00000032666) Cyprininae_a ANCESTRAL SPECIES 33 ENSGT00390000007237.s.b ENSGT00940000163093.a.a.b ENSGT00940000161428.f ENSGT00940000160457.a.a ENSGT00940000168097 ENSGT00950000183048.b.a.d.j ENSGT00950000183023.A.h.d.b.a.a.a ENSGT00950000183023.A.h.d.b.a.a.b ENSGT00950000183023.B.m.b.a ENSGT00990000204702.a ENSGT00940000163239.f ENSGT00940000166571.b ENSGT00390000016048 ENSGT00950000182944.A.a.b.a #22 ENSGT00950000182944.A.a.a.a.a.b #22 ENSGT00950000182944.A.a.a.b.c.b #22 ENSGT00390000015701.h ENSGT00650000094922.p ENSGT00940000155677.b.k ENSGT00940000159782.b.i ENSGT00390000015655.a.m.b.e ENSGT00940000156648.f.b ENSGT00940000156536.e.a.j.a ENSGT00390000009497.a.f ENSGT00940000155350.h.e ENSGT00390000006320.s ENSGT00390000007918.a ENSGT00390000018651.a.h ENSGT00940000156466.eb ENSGT00990000204705.b ENSGT00940000155402.a.b.e.a Golden-line barbel MODERN SPECIES 343 or62a2 (ENSSGRG00000044819) pold3 (ENSSGRG00000044820) chrdl2 (ENSSGRG00000044822) NEU3 (ENSSGRG00000044824) #22 ENSSGRG00000044825 #22 wdr73 (ENSSGRG00000044827) defbl2 (ENSSGRG00000044829) gria4b (ENSSGRG00000044952) elmod1 (ENSSGRG00000048337) slc35f2 (ENSSGRG00000048338) CUL5 (ENSSGRG00000048342) CAPN5 (ENSSGRG00000048363) ompb (ENSSGRG00000048373) MYO7A (ENSSGRG00000048382) nadk2 (ENSSGRG00000048405) skp2 (ENSSGRG00000048412) lmbrd2b (ENSSGRG00000048422) capslb (ENSSGRG00000048599) il7r (ENSSGRG00000048600) myo5b (ENSSGRG00000048632) Cyprininae ANCESTRAL SPECIES 144 ENSGT00940000163093.a.a.a.a ENSGT00940000163093.a.a.a.b.a ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428.e ENSGT00940000160457.a.b ENSGT00950000183048.b.a.d.i ENSGT00950000183023.A.h.c.a.a ENSGT00950000183023.A.h.c.b.a.a.a ENSGT00950000183023.A.h.c.b.b ENSGT00950000183023.A.h.d.b.a.b ENSGT00950000183023.B.m.b.b ENSGT00990000204702.b ENSGT00940000163239.e ENSGT00940000166571.a ENSGT00950000182944.A.a.a.a.a.a #22 ENSGT00950000182944.A.a.a.b.d #22 Cyprininae_a ANCESTRAL SPECIES 89 ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428.e ENSGT00940000160457.a.b ENSGT00950000183048.b.a.d.i ENSGT00950000183023.A.h.c.a.a ENSGT00950000183023.A.h.c.b.a.a.a ENSGT00950000183023.A.h.c.b.a.b ENSGT00950000183023.A.h.d.b.a.b ENSGT00950000183023.A.h.d.b.b.a.a.a.b ENSGT00950000183023.A.h.d.b.b.b ENSGT00950000183023.B.m.b.b ENSGT00990000204702.b ENSGT00940000163239.e ENSGT00940000166571.a ENSGT00950000182944.A.a.a.a.a.a #22 ENSGT00950000182944.A.a.a.b.d #22 ENSGT00950000182944.A.a.a.a.b #22 ENSGT00390000015701.g ENSGT00940000155677.b.l ENSGT00940000159782.b.j ENSGT00390000015655.a.m.b.f ENSGT00940000156648.f.a ENSGT00940000156536.e.a.j.b ENSGT00390000009497.a.e ENSGT00940000155350.h.f ENSGT00940000156251.b ENSGT00390000006320.t ENSGT00390000007918.b ENSGT00390000018651.a.g ENSGT00990000204705.a ENSGT00940000155402.a.b.e.b Common carp reference MODERN SPECIES 38 ENSCCRG00000080655 ENSCCRG00000065299 or62b4 (ENSCCRG00000055223) or62b5 (ENSCCRG00000080334) or62a3 (ENSCCRG00000060080) or62a1 (ENSCCRG00000011710) or62a1 (ENSCCRG00000024126) or62a1 (ENSCCRG00000028160) ENSCCRG00000024121 defbl1 (ENSCCRG00000031763) defbl1 (ENSCCRG00000016744) pold3 (ENSCCRG00000041029) ENSCCRG00000067418 chrdl2 (ENSCCRG00000076415) ENSCCRG00000003660 #22 neu3.4 (ENSCCRG00000067519) #22 ENSCCRG00000080549 #22 wdr73 (ENSCCRG00000003680) gria4b (ENSCCRG00000067130) elmod1 (ENSCCRG00000023504) slc35f2 (ENSCCRG00000007018) ENSCCRG00000046721 CAPN5 (ENSCCRG00000017389) MYO7A (ENSCCRG00000050029) GDPD4 (ENSCCRG00000050622) nadk2 (ENSCCRG00000011371) skp2 (ENSCCRG00000069379) lmbrd2b (ENSCCRG00000050645) il7r (ENSCCRG00000063390) myo5b (ENSCCRG00000050749) ENSCCRG00000070030 Otophysi ANCESTRAL SPECIES 37 ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000007237.s ENSGT00940000161428 ENSGT00940000160457.a ENSGT00940000168097 ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h ENSGT00950000183023.B.m.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.f ENSGT00940000156536.e.a.j ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00970000193642 ENSGT00940000159682 ENSGT00940000163088.b Characiphysae ANCESTRAL SPECIES 23 ENSGT00940000160457.a ENSGT00510000046499 ENSGT01100000263522.B.b.l ENSGT00940000167612.b ENSGT00950000183048.b.b.c ENSGT00950000183023.A.g.b ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h ENSGT00950000183023.B.m.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156536.e.a.j ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00990000204705 ENSGT00940000155402.a.b ENSGT00970000193642 ENSGT00940000159682 Channel catfish MODERN SPECIES 9 ARSB (ENSIPUG00000002667) kif20a (ENSIPUG00000002633) cdc23 (ENSIPUG00000002615) CAMLG (ENSIPUG00000002605) ddx46 (ENSIPUG00000002564) ENSIPUG00000002537 b9d2 (ENSIPUG00000002529) tgfb1 (ENSIPUG00000002511) ENSIPUG00000002481 cbr1l (ENSIPUG00000002463) defbl1 (ENSIPUG00000002456) ENSIPUG00000002438 pold3 (ENSIPUG00000002408) chrdl2 (ENSIPUG00000002365) xrra1 (ENSIPUG00000002351) neu3 (ENSIPUG00000002341) #22 wdr73 (ENSIPUG00000002280) ENSIPUG00000002182 ENSIPUG00000002158 defbl2 (ENSIPUG00000002102) ENSIPUG00000002077 gria4b (ENSIPUG00000002027) elmod1 (ENSIPUG00000001979) slc35f2 (ENSIPUG00000001958) CAPN5 (ENSIPUG00000001939) MYO7A (ENSIPUG00000001886) nadk2 (ENSIPUG00000001868) skp2 (ENSIPUG00000001858) lmbrd2b (ENSIPUG00000001814) capslb (ENSIPUG00000001802) il7r (ENSIPUG00000001777) Characiphysae_b ANCESTRAL SPECIES 21 ENSGT01100000263522.B.b.l ENSGT00940000167612.b ENSGT00950000183048.b.b.c ENSGT01030000234640.a.a.e ENSGT00950000183023.A.g.b ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h.a.b ENSGT00950000183023.B.m.a ENSGT00950000183023.A.h.a.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156536.e.a.j ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00990000204705 ENSGT00940000155402.a.b ENSGT00970000193642 ENSGT00940000159682 Characoidei ANCESTRAL SPECIES 128 ENSGT00940000167612.b ENSGT00950000183048.b.b.c ENSGT01030000234640.a.a.e ENSGT00950000183023.A.g.b ENSGT00950000183023.A.g.a.b ENSGT01030000234640.b ENSGT00950000183048.b.a.c ENSGT00950000183023.A.h.a.b ENSGT00950000183023.B.m.a ENSGT00950000183023.A.h.a.a ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156536.e.a.j ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00990000204705 ENSGT00940000155402.a.b ENSGT00970000193642 ENSGT00940000159682 Red-bellied piranha MODERN SPECIES 343 ENSPNAG00000017396 ENSPNAG00000017385 ENSPNAG00000017373 ENSPNAG00000017343 or61a1 (ENSPNAG00000017297) or61c1 (ENSPNAG00000017281) defbl1 (ENSPNAG00000017275) chrdl2 (ENSPNAG00000017261) ENSPNAG00000017212 ENSPNAG00000017139 neu3.1 (ENSPNAG00000017133) #22 ENSPNAG00000017118 neu3.5 (ENSPNAG00000017066) #22 wdr73 (ENSPNAG00000017053) defbl2 (ENSPNAG00000017019) ENSPNAG00000017011 gria4b (ENSPNAG00000003456) elmod1 (ENSPNAG00000016782) CAPN5 (ENSPNAG00000016661) slc35f2 (ENSPNAG00000016587) ENSPNAG00000016576 MYO7A (ENSPNAG00000016536) ENSPNAG00000016308 capslb (ENSPNAG00000016284) il7r (ENSPNAG00000016278) myo5b (ENSPNAG00000016264) Mexicana tetra MODERN SPECIES 5 nectin3b (ENSAMXG00000002520) diablob (ENSAMXG00000041613) b9d2 (ENSAMXG00000038790) ENSAMXG00000002558 ENSAMXG00000002607 cbr1l (ENSAMXG00000033906) ENSAMXG00000033580 ENSAMXG00000002637 ENSAMXG00000041922 ENSAMXG00000041289 or61c1 (ENSAMXG00000032768) defbl1 (ENSAMXG00000002657) pold3 (ENSAMXG00000002663) chrdl2 (ENSAMXG00000002716) ENSAMXG00000030537 neu3.1 (ENSAMXG00000030778) #22 wdr73 (ENSAMXG00000041077) defbl2 (ENSAMXG00000002849) gria4b (ENSAMXG00000002917) elmod1 (ENSAMXG00000037229) slc35f2 (ENSAMXG00000030030) CAPN5 (ENSAMXG00000003190) MYO7A (ENSAMXG00000003253) nadk2 (ENSAMXG00000003366) skp2 (ENSAMXG00000003385) lmbrd2b (ENSAMXG00000032666) capslb (ENSAMXG00000003433) il7r (ENSAMXG00000038525) ENSAMXG00000040957 ENSAMXG00000039113 cfap53 (ENSAMXG00000003914) Electric eel MODERN SPECIES 6 ENSEEEG00000003049 ppm1nb (ENSEEEG00000003052) rtn2b (ENSEEEG00000003053) nectin3b (ENSEEEG00000003054) diablob (ENSEEEG00000003056) b9d2 (ENSEEEG00000003058) ENSEEEG00000003059 ENSEEEG00000003060 ENSEEEG00000003062 ENSEEEG00000003064 ENSEEEG00000003067 ENSEEEG00000003069 defbl1 (ENSEEEG00000003074) pold3 (ENSEEEG00000003079) chrdl2 (ENSEEEG00000003081) neu3.1 (ENSEEEG00000003083) #22 wdr73 (ENSEEEG00000003084) gria4b (ENSEEEG00000003092) elmod1 (ENSEEEG00000003127) slc35f2 (ENSEEEG00000003134) ENSEEEG00000003137 ENSEEEG00000003138 CAPN5 (ENSEEEG00000003139) MYO7A (ENSEEEG00000003150) nadk2 (ENSEEEG00000003171) skp2 (ENSEEEG00000003175) lmbrd2b (ENSEEEG00000003181) capslb (ENSEEEG00000003186) il7r (ENSEEEG00000003189) myo5b (ENSEEEG00000003234) cfap53 (ENSEEEG00000004124) Cyprinoidei ANCESTRAL SPECIES 54 ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000007237.s ENSGT00940000163093.a.a.a.a ENSGT00940000163093.a.a.a.b.a ENSGT00940000163093.a.a.a.b.b ENSGT00940000161428 ENSGT00940000160457.a ENSGT00510000046499.y ENSGT00950000183023.A.h.d.b.b ENSGT00950000183023.B.m.b ENSGT00990000204702 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a.b #22 ENSGT00950000182944.A.a.a.a #22 ENSGT00950000182944.A.a.a.b #22 ENSGT00390000015701 ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.f ENSGT00940000156536.e.a.j ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000018651.a ENSGT00940000156466 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 207 ENSGT00390000003107.b.i.c ENSGT01080000257533.a ENSGT00610000087474.c ENSGT00940000166868.a.a ENSGT00940000164695.b.b ENSGT00940000160599.q ENSGT00940000156028.t.b ENSGT00390000007237.s.b ENSGT00950000183023.A.h.d.b.a.a.a ENSGT00950000183023.A.h.d.b.a.a.b ENSGT00950000183023.B.m.b.a ENSGT00990000204702.a ENSGT00940000163239.f ENSGT00940000166571.b ENSGT00390000016048 ENSGT00950000182944.A.a.b.a #22 ENSGT00950000182944.A.a.a.a.a.b #22 ENSGT00950000182944.A.a.a.b.c.b #22 ENSGT00390000015701.h ENSGT00650000094922.p ENSGT00940000155677.b.k ENSGT00940000159782.b.i ENSGT00390000015655.a.m.b.e ENSGT00940000156648.f.b ENSGT00940000156536.e.a.j.a ENSGT00390000009497.a.f ENSGT00940000155350.h.e ENSGT00390000006320.s ENSGT00390000007918.a ENSGT00390000018651.a.h ENSGT00940000156466.eb Cyprininae_a ANCESTRAL SPECIES 33 ENSGT00940000160599.q ENSGT00940000156028.t.b ENSGT00390000007237.s.b ENSGT00940000163093.a.a.b ENSGT00940000161428.f ENSGT00940000160457.a.a ENSGT00940000168097 ENSGT00950000183048.b.a.d.j ENSGT00950000183023.A.h.d.b.a.a.a ENSGT00950000183023.A.h.d.b.a.a.b ENSGT00950000183023.B.m.b.a ENSGT00990000204702.a ENSGT00940000163239.f ENSGT00940000166571.b ENSGT00390000016048 ENSGT00950000182944.A.a.b.a #22 ENSGT00950000182944.A.a.a.a.a.b #22 ENSGT00950000182944.A.a.a.b.c.b #22 ENSGT00390000015701.h ENSGT00650000094922.p ENSGT00940000155677.b.k ENSGT00940000159782.b.i ENSGT00390000015655.a.m.b.e ENSGT00940000156648.f.b ENSGT00940000156536.e.a.j.a ENSGT00390000009497.a.f ENSGT00940000155350.h.e ENSGT00390000006320.s ENSGT00390000007918.a ENSGT00390000018651.a.h ENSGT00940000156466.eb Common carp reference MODERN SPECIES 45 ENSCCRG00000056766 b9d2 (ENSCCRG00000063478) ENSCCRG00000008975 cbr1l (ENSCCRG00000056610) ENSCCRG00000034010 or62a3 (ENSCCRG00000053349) or62a3 (ENSCCRG00000009341) or62a3 (ENSCCRG00000063021) ENSCCRG00000062614 or62a3 (ENSCCRG00000069479) ENSCCRG00000037328 defbl1 (ENSCCRG00000037329) pold3 (ENSCCRG00000037335) chrdl2 (ENSCCRG00000063343) ENSCCRG00000037448 neu3.1 (ENSCCRG00000054230) #22 ENSCCRG00000037233 #22 defbl2 (ENSCCRG00000062722) gria4b (ENSCCRG00000064152) elmod1 (ENSCCRG00000060203) slc35f2 (ENSCCRG00000025636) ENSCCRG00000071860 ENSCCRG00000049995 ompb (ENSCCRG00000077840) ENSCCRG00000017754 nadk2 (ENSCCRG00000050625) skp2 (ENSCCRG00000059949) lmbrd2b (ENSCCRG00000011451) capslb (ENSCCRG00000061757) il7r (ENSCCRG00000056341) ENSCCRG00000055703 Goldfish MODERN SPECIES 13 C6 (ENSCARG00000004176) rnf180b (ENSCARG00000004098) b9d2 (ENSCARG00000004078) ENSCARG00000004050 cbr1l (ENSCARG00000004022) ENSCARG00000004010 ENSCARG00000004001 ENSCARG00000003996 or62a2 (ENSCARG00000003975) or62a2 (ENSCARG00000003968) or62a3 (ENSCARG00000003948) or62a3 (ENSCARG00000003931) defbl1 (ENSCARG00000003914) pold3 (ENSCARG00000003881) chrdl2 (ENSCARG00000003838) neu3.1 (ENSCARG00000003806) #22 NEU3 (ENSCARG00000070462) #22 defbl2 (ENSCARG00000070461) gria4b (ENSCARG00000070450) elmod1 (ENSCARG00000070445) slc35f2 (ENSCARG00000070444) CUL5 (ENSCARG00000070443) ompb (ENSCARG00000070442) CAPN5 (ENSCARG00000070441) MYO7A (ENSCARG00000070438) nadk2 (ENSCARG00000070436) skp2 (ENSCARG00000070435) lmbrd2b (ENSCARG00000070420) capslb (ENSCARG00000070418) il7r (ENSCARG00000070416) myo5b (ENSCARG00000070339) Cyprininae ANCESTRAL SPECIES 1892 ENSGT00950000182944.A.a.b.b #22 ENSGT00950000182944.A.a.a.b.c.a #22 Goldfish MODERN SPECIES 40 ENSCARG00000037351 ENSCARG00000037363 ENSCARG00000037383 or62b3 (ENSCARG00000037401) or62a1 (ENSCARG00000037435) or62a1 (ENSCARG00000037468) or62a1 (ENSCARG00000037484) or62a1 (ENSCARG00000037505) or62a1 (ENSCARG00000037515) ENSCARG00000037556 ENSCARG00000037594 defbl1 (ENSCARG00000037610) pold3 (ENSCARG00000037652) chrdl2 (ENSCARG00000037905) ENSCARG00000037976 neu3.1 (ENSCARG00000038003) #22 NEU3 (ENSCARG00000038008) #22 NEU3 (ENSCARG00000038028) #22 NEU3 (ENSCARG00000038041) #22 wdr73 (ENSCARG00000038059) gria4b (ENSCARG00000038091) elmod1 (ENSCARG00000038454) slc35f2 (ENSCARG00000038502) CUL5 (ENSCARG00000038536) CAPN5 (ENSCARG00000024584) ompb (ENSCARG00000025699) MYO7A (ENSCARG00000025821) ENSCARG00000029274 nadk2 (ENSCARG00000029310) skp2 (ENSCARG00000029482) lmbrd2b (ENSCARG00000029545) Zebrafish MODERN SPECIES 13 or62b2 (ENSDARG00000093183) or62b1 (ENSDARG00000092577) or62b4 (ENSDARG00000105729) or62b3 (ENSDARG00000095417) or62b5 (ENSDARG00000105706) or62a1 (ENSDARG00000094714) or62a3 (ENSDARG00000093856) or61a1 (ENSDARG00000092558) or61c2 (ENSDARG00000092707) or61c1 (ENSDARG00000094326) ENSDARG00000096264 defbl1 (ENSDARG00000075161) pold3 (ENSDARG00000076169) chrdl2 (ENSDARG00000078916) ENSDARG00000089578 neu3.1 (ENSDARG00000096382) #22 neu3.2 (ENSDARG00000010047) #22 neu3.3 (ENSDARG00000058327) #22 neu3.4 (ENSDARG00000096381) #22 neu3.5 (ENSDARG00000096368) #22 wdr73 (ENSDARG00000023152) defbl2 (ENSDARG00000096380) gria4b (ENSDARG00000059368) elmod1 (ENSDARG00000062056) slc35f2 (ENSDARG00000069745) CUL5 (ENSDARG00000004260) CAPN5 (ENSDARG00000069748) ompb (ENSDARG00000032380) MYO7A (ENSDARG00000044632) ENSDARG00000079293 nadk2 (ENSDARG00000007181) Euteleosteomorpha ANCESTRAL SPECIES 113 ENSGT00940000165793 ENSGT00940000175321 ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT01100000263522.B.a ENSGT01100000263522.B.b ENSGT00940000158353 ENSGT00390000006450 ENSGT00960000187097 ENSGT00940000153680.b ENSGT00440000038181 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00390000015701 ENSGT00650000094922 ENSGT00940000160131 ENSGT00940000156921 ENSGT00940000158551 ENSGT00940000153680.a ENSGT01030000234590.A.a.a ENSGT01060000248592.C ENSGT01060000248589.A ENSGT01060000248589.B ENSGT00850000132319.a.a.a ENSGT00940000162644 ENSGT00390000003912 ENSGT00730000111053 ENSGT00940000161729.n Protacanthopterygii ANCESTRAL SPECIES 11 ENSGT00950000182988.a.b.b.b ENSGT00700000104815 ENSGT00730000111282.b ENSGT00940000153993.A.j ENSGT00940000157956.p ENSGT00940000157956.o.b ENSGT00940000166305.B ENSGT00940000157536.a.b ENSGT00940000159295 ENSGT00940000155114 ENSGT00940000159306.b.a ENSGT00390000001520 ENSGT00940000166571 ENSGT00940000163239 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00390000015701 ENSGT00650000094922 ENSGT00940000164481.b.b ENSGT00390000016213 ENSGT00940000157181 ENSGT01100000263497.D ENSGT00390000014835 ENSGT00940000175063 ENSGT00940000159256.o Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 107 ENSGT00730000111282.b.c ENSGT00940000153993.A.j.h ENSGT00940000157956.o.b.e.a ENSGT00940000166305.B.h ENSGT00970000198205 ENSGT00940000155114.o.a ENSGT00940000159306.b.a.d ENSGT00390000001520.d ENSGT00940000166571.d ENSGT00940000163239.g ENSGT00950000182944.A.a.c #22 ENSGT00390000015701.b ENSGT00650000094922.c.a ENSGT00390000016213.j ENSGT00940000157181.c ENSGT01100000263497.D.h ENSGT00990000211386 ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a.c.b.a ENSGT00390000005826.a.a.u.a ENSGT00500000044869.a.b.m ENSGT00940000155312.b.e ENSGT00940000155288.b.pd.a.a ENSGT00940000160232.k.a ENSGT00940000161428.a ENSGT00940000160457.a.d Huchen MODERN SPECIES 263 PAK3 (ENSHHUG00000047475) her1 (ENSHHUG00000047498) mepcea (ENSHHUG00000047501) ENSHHUG00000047507 ENSHHUG00000047517 ENSHHUG00000047526 ephb4a (ENSHHUG00000047570) ENSHHUG00000047681 PSMB6 (ENSHHUG00000047684) KCNAB3 (ENSHHUG00000047692) spag7 (ENSHHUG00000047837) chrdl2 (ENSHHUG00000047853) pold3 (ENSHHUG00000047869) NEU3 (ENSHHUG00000047887) #22 wdr73 (ENSHHUG00000047891) defbl2 (ENSHHUG00000047905) nfrkb (ENSHHUG00000047910) tmem45b (ENSHHUG00000047932) gng8 (ENSHHUG00000047939) ENSHHUG00000047943 ENSHHUG00000047947 ENSHHUG00000047949 napaa (ENSHHUG00000047952) RSPH6A (ENSHHUG00000047974) ENSHHUG00000047979 ENSHHUG00000048013 ENSHHUG00000048017 ENSHHUG00000048022 ENSHHUG00000048031 Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00530000063484.b.a.g.b ENSGT00940000154895.a.b.h ENSGT00940000156128.b.i ENSGT00950000182988.a.b.b.b.q.b ENSGT00730000111282.b.c ENSGT00940000153993.A.j.h ENSGT00940000157956.o.b.e.a ENSGT00940000166305.B.h ENSGT00970000198205 ENSGT00940000155114.o.a ENSGT00940000159306.b.a.c.b.a ENSGT00940000159306.b.a.d ENSGT00390000001520.d ENSGT00940000166571.d ENSGT00940000163239.g ENSGT00950000182944.A.a.c #22 ENSGT00390000015701.b ENSGT00650000094922.c.a ENSGT00390000016213.j ENSGT00940000157181.c ENSGT01100000263497.D.h ENSGT00990000211386 ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a.c.b.a ENSGT00390000005826.a.a.u.a ENSGT00500000044869.a.b.m ENSGT00940000155312.b.e ENSGT00940000155288.b.pd.a.a ENSGT00940000160232.k.a ENSGT00940000161428.a ENSGT00940000160457.a.d Salmo ANCESTRAL SPECIES 18 ENSGT00940000159971.k ENSGT00530000063484.b.a.g.b ENSGT00940000154895.a.b.h ENSGT00940000156128.b.i ENSGT00950000182988.a.b.b.b.q.b ENSGT00730000111282.b.c ENSGT00940000153993.A.j.h ENSGT00940000157956.o.b.e.a ENSGT00940000166305.B.h ENSGT00970000198205 ENSGT00940000155114.o.a ENSGT00940000159306.b.a.d ENSGT00390000001520.d ENSGT00940000166571.d ENSGT00940000163239.g ENSGT00950000182944.A.a.c #22 ENSGT00390000015701.b ENSGT00650000094922.c.a ENSGT00390000016213.j ENSGT00940000157181.c ENSGT01100000263497.D.h ENSGT00990000211386 ENSGT00940000156646.c.e ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a.c.b.a ENSGT00390000005826.a.a.u.a ENSGT00500000044869.a.b.m ENSGT00940000155312.b.e ENSGT00940000155288.b.pd.a.a ENSGT00940000160232.k.a ENSGT00940000161428.a Atlantic salmon MODERN SPECIES 23 il13ra2 (ENSSSAG00000051928) ENSSSAG00000051908 ENSSSAG00000051877 ENSSSAG00000051310 ENSSSAG00000068125 her1 (ENSSSAG00000045929) mepcea (ENSSSAG00000045920) ENSSSAG00000006558 ephb4a (ENSSSAG00000111074) ENSSSAG00000083386 ENSSSAG00000103571 ENSSSAG00000119780 ENSSSAG00000088026 chrdl2 (ENSSSAG00000005351) ENSSSAG00000005314 ENSSSAG00000088831 #22 defbl2 (ENSSSAG00000087880) ENSSSAG00000106743 nfrkb (ENSSSAG00000005134) ENSSSAG00000005260 gbg8 (ENSSSAG00000005246) ENSSSAG00000005239 ENSSSAG00000117353 ENSSSAG00000005094 snaa (ENSSSAG00000005060) ENSSSAG00000005042 ENSSSAG00000003910 ENSSSAG00000003824 ENSSSAG00000003110 ENSSSAG00000002603 ENSSSAG00000113183 River trout MODERN SPECIES 10 ENSSTUG00000030922 ENSSTUG00000030941 ENSSTUG00000030954 PAK3 (ENSSTUG00000031007) ENSSTUG00000031049 her1 (ENSSTUG00000031054) mepcea (ENSSTUG00000031059) DLG4 (ENSSTUG00000031075) ephb4a (ENSSTUG00000031657) ENSSTUG00000031681 PSMB6 (ENSSTUG00000031722) KCNAB3 (ENSSTUG00000031742) spag7 (ENSSTUG00000031758) chrdl2 (ENSSTUG00000031772) pold3 (ENSSTUG00000031790) NEU3 (ENSSTUG00000031846) #22 wdr73 (ENSSTUG00000031854) defbl2 (ENSSTUG00000031875) nfrkb (ENSSTUG00000031893) tmem45b (ENSSTUG00000032001) gng8 (ENSSTUG00000032025) ENSSTUG00000032031 ENSSTUG00000032050 ENSSTUG00000032163 napaa (ENSSTUG00000032173) ENSSTUG00000032207 ENSSTUG00000032255 zgc:153345 (ENSSTUG00000033399) RYR1 (ENSSTUG00000033866) ENSSTUG00000002413 b9d2 (ENSSTUG00000003188) Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000159971.k ENSGT00530000063484.b.a.g.b ENSGT00940000154895.a.b.h ENSGT00940000156128.b.i ENSGT00950000182988.a.b.b.b.q.b ENSGT00730000111282.b.c ENSGT00940000153993.A.j.h ENSGT00940000157956.o.b.e.a ENSGT00940000166305.B.h ENSGT00970000198205 ENSGT00940000155114.o.a ENSGT00940000159306.b.a.c.b.a ENSGT00390000001520.d ENSGT00940000166571.d ENSGT00940000163239.g ENSGT00950000182944.A.a.c #22 ENSGT00390000015701.b ENSGT00650000094922.c.a ENSGT00390000016213.j ENSGT00940000157181.c ENSGT01100000263497.D.h ENSGT00990000211386 ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a.c.b.a ENSGT00390000005826.a.a.u.a ENSGT00500000044869.a.b.m ENSGT00940000155312.b.e ENSGT00940000155288.b.pd.a.a ENSGT00940000160232.k.a ENSGT00940000161428.a ENSGT00940000160457.a.d Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000159971.k ENSGT00530000063484.b.a.g.b ENSGT00940000154895.a.b.h ENSGT00940000156128.b.i ENSGT00950000182988.a.b.b.b.q.b ENSGT00730000111282.b.c ENSGT00940000153993.A.j.h ENSGT00940000157956.o.b.e.a ENSGT00940000166305.B.h ENSGT00970000198205 ENSGT00940000155114.o.a ENSGT00940000159306.b.a.c.b.a ENSGT00390000001520.d ENSGT00940000166571.d ENSGT00940000163239.g ENSGT00950000182944.A.a.c #22 ENSGT00390000015701.b ENSGT00650000094922.c.a ENSGT00390000016213.j ENSGT00940000157181.c ENSGT01100000263497.D.h ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a.c.b.a ENSGT00390000005826.a.a.u.a ENSGT00500000044869.a.b.m ENSGT00940000155312.b.e ENSGT00940000155288.b.pd.a.a ENSGT00940000160232.k.a ENSGT00940000161428.a ENSGT00940000160457.a.d ENSGT00870000136506.qc.a Coho salmon MODERN SPECIES 20 ENSOKIG00005026866 ENSOKIG00005026847 ENSOKIG00005026824 ENSOKIG00005026768 PAK3 (ENSOKIG00005026637) her1 (ENSOKIG00005026613) mepcea (ENSOKIG00005026605) DLG4 (ENSOKIG00005024368) ephb4a (ENSOKIG00005023648) ENSOKIG00005023602 PSMB6 (ENSOKIG00005049816) KCNAB3 (ENSOKIG00005049729) SPAG7 (ENSOKIG00005049707) ENSOKIG00005049700 ENSOKIG00005049692 NEU3 (ENSOKIG00005049685) #22 wdr73 (ENSOKIG00005049673) defbl2 (ENSOKIG00005049667) nfrkb (ENSOKIG00005049659) TMEM45B (ENSOKIG00005049652) gng8 (ENSOKIG00005049649) ENSOKIG00005049641 ENSOKIG00005049639 napaa (ENSOKIG00005049637) ENSOKIG00005049634 ENSOKIG00005049516 zgc:153345 (ENSOKIG00005049449) RYR1 (ENSOKIG00005049017) B9D2 (ENSOKIG00005048916) ENSOKIG00005048784 ENSOKIG00005048756 Chinook salmon MODERN SPECIES 23 ENSOTSG00005034390 prox3 (ENSOTSG00005034392) ENSOTSG00005034393 ENSOTSG00005034394 PAK3 (ENSOTSG00005034401) her1 (ENSOTSG00005034700) mepcea (ENSOTSG00005034701) DLG4 (ENSOTSG00005034702) ephb4a (ENSOTSG00005034706) ENSOTSG00005034722 psmb6 (ENSOTSG00005034723) KCNAB3 (ENSOTSG00005034741) spag7 (ENSOTSG00005038450) chrdl2 (ENSOTSG00005038452) pold3 (ENSOTSG00005038455) NEU3 (ENSOTSG00005038457) #22 wdr73 (ENSOTSG00005038458) defbl2 (ENSOTSG00005038459) nfrkb (ENSOTSG00005038461) tmem45b (ENSOTSG00005038462) gng8 (ENSOTSG00005038463) ENSOTSG00005038465 ENSOTSG00005002972 napaa (ENSOTSG00005003023) ENSOTSG00005004278 ENSOTSG00005004305 zgc:153345 (ENSOTSG00005004393) RYR1 (ENSOTSG00005004432) ENSOTSG00005008040 b9d2 (ENSOTSG00005008445) ENSOTSG00005008446 Rainbow trout MODERN SPECIES 1 il13ra2 (ENSOMYG00000013157) ENSOMYG00000013173 ENSOMYG00000013182 ENSOMYG00000013229 ENSOMYG00000013393 her1 (ENSOMYG00000013570) mepcea (ENSOMYG00000013577) ENSOMYG00000059691 ephb4a (ENSOMYG00000013611) ENSOMYG00000013657 ENSOMYG00000013660 ENSOMYG00000013670 ENSOMYG00000013690 ENSOMYG00000013699 ENSOMYG00000013708 ENSOMYG00000013715 #22 ENSOMYG00000013725 DEFB5 (ENSOMYG00000067813) nfrkb (ENSOMYG00000013751) ENSOMYG00000013775 gng8 (ENSOMYG00000071502) ENSOMYG00000013800 ENSOMYG00000013834 ENSOMYG00000013849 napaa (ENSOMYG00000013860) ENSOMYG00000013916 ENSOMYG00000014000 ENSOMYG00000014739 ENSOMYG00000016714 ENSOMYG00000045937 ENSOMYG00000045945 Salmoninae ANCESTRAL SPECIES 198 ENSGT00700000104815.k ENSGT00730000111282.b.d ENSGT00940000153993.A.j.g ENSGT00940000157956.o.b.e.b ENSGT00940000166305.B.g ENSGT00940000157536.a.b ENSGT00940000155114.o.b ENSGT00940000159306.b.a.c.a ENSGT00390000001520.c ENSGT00940000166571.c ENSGT00940000163239.h ENSGT00390000016048 ENSGT00950000182944.A.a.d #22 ENSGT00390000015701.a ENSGT00650000094922.c.b ENSGT00940000164481.b.b ENSGT00390000016213.i ENSGT00940000157181.d ENSGT01100000263497.D.g ENSGT00390000014835 ENSGT00940000175063 ENSGT00940000159256.o ENSGT00940000158431.a.a.a.a.b.a.c.b.b ENSGT00390000005826.a.a.u.b ENSGT00500000044869.a.b.n ENSGT00390000017045 ENSGT00440000037341.b.b ENSGT00940000155312.b.f Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000161570 ENSGT00940000156128.b.j ENSGT00950000182988.a.b.b.b.q.a ENSGT00700000104815.k ENSGT00730000111282.b.d ENSGT00940000153993.A.j.g ENSGT00940000157956.o.b.e.b ENSGT00940000166305.B.g ENSGT00940000157536.a.b ENSGT00940000155114.o.b ENSGT00940000159306.b.a.c.a ENSGT00390000001520.c ENSGT00940000166571.c ENSGT00940000163239.h ENSGT00390000016048 ENSGT00950000182944.A.a.d #22 ENSGT00390000015701.a ENSGT00650000094922.c.b ENSGT00940000164481.b.b ENSGT00390000016213.i ENSGT00940000157181.d ENSGT01100000263497.D.g ENSGT00390000014835 ENSGT00940000175063 ENSGT00940000159256.o ENSGT00940000158431.a.a.a.a.b.a.c.b.b ENSGT00390000005826.a.a.u.b ENSGT00500000044869.a.b.n ENSGT00390000017045 ENSGT00940000156546.ab ENSGT00440000037341.b.b Salmo ANCESTRAL SPECIES 1 ENSGT00530000063484.b.a.g.a ENSGT00940000154895.a.b.g ENSGT00940000156128.b.j ENSGT00950000182988.a.b.b.b.q.a ENSGT00700000104815.k ENSGT00730000111282.b.d ENSGT00940000153993.A.j.g ENSGT00940000157956.o.b.e.b ENSGT00940000166305.B.g ENSGT00940000157536.a.b ENSGT00940000155114.o.b ENSGT00940000159306.b.a.c.a ENSGT00390000001520.c ENSGT00940000166571.c ENSGT00390000016048 ENSGT00950000182944.A.a.d #22 ENSGT00390000015701.a ENSGT00650000094922.c.b ENSGT00940000164481.b.b ENSGT00390000016213.i ENSGT00940000157181.d ENSGT01100000263497.D.g ENSGT00390000014835 ENSGT00940000175063 ENSGT00940000159256.o ENSGT00940000158431.a.a.a.a.b.a.c.b.b ENSGT00390000005826.a.a.u.b ENSGT00500000044869.a.b.n ENSGT00390000017045 ENSGT00940000156546.ab ENSGT00440000037341.b.b Atlantic salmon MODERN SPECIES 2 ENSSSAG00000067736 ENSSSAG00000090084 her7 (ENSSSAG00000072854) her1 (ENSSSAG00000072857) mepcea (ENSSSAG00000072859) ENSSSAG00000072878 ENSSSAG00000106983 ephb4a (ENSSSAG00000083235) ENSSSAG00000100433 tnfsf13 (ENSSSAG00000073630) ENSSSAG00000073637 ENSSSAG00000090984 ENSSSAG00000095379 ENSSSAG00000107002 ENSSSAG00000094050 neu3 (ENSSSAG00000073782) #22 wdr73 (ENSSSAG00000108080) nfrkb (ENSSSAG00000073822) tmem45b (ENSSSAG00000115863) gng8 (ENSSSAG00000115132) sycn.2 (ENSSSAG00000112117) ENSSSAG00000074230 napaa (ENSSSAG00000074237) sympk (ENSSSAG00000074347) hnrnpul1l (ENSSSAG00000075871) ENSSSAG00000076644 ENSSSAG00000076708 ENSSSAG00000077487 ENSSSAG00000077813 b9d2 (ENSSSAG00000077816) ENSSSAG00000077821 River trout MODERN SPECIES 3 ENSSTUG00000045510 CAPN6 (ENSSTUG00000045551) PAK3 (ENSSTUG00000045621) her7 (ENSSTUG00000045638) her7 (ENSSTUG00000045656) her7 (ENSSTUG00000045668) her1 (ENSSTUG00000045676) mepcea (ENSSTUG00000045682) ENSSTUG00000045690 tnfsf13 (ENSSTUG00000045695) PSMB6 (ENSSTUG00000045711) KCNAB3 (ENSSTUG00000045729) spag7 (ENSSTUG00000046016) chrdl2 (ENSSTUG00000046025) ENSSTUG00000046036 NEU3 (ENSSTUG00000046047) #22 wdr73 (ENSSTUG00000046055) defbl2 (ENSSTUG00000046120) st14b (ENSSTUG00000046135) nfrkb (ENSSTUG00000031824) tmem45b (ENSSTUG00000032000) gng8 (ENSSTUG00000032015) sycn.2 (ENSSTUG00000032019) ENSSTUG00000032020 ENSSTUG00000032033 ENSSTUG00000032058 napaa (ENSSTUG00000032065) ENSSTUG00000032183 SYMPK (ENSSTUG00000032251) ENSSTUG00000032958 im:7138535 (ENSSTUG00000034887) Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00950000182988.a.b.b.b.q.a.a ENSGT00700000104815.l ENSGT00700000104815.k.b ENSGT00700000104815.k.a ENSGT00730000111282.b.d ENSGT00940000153993.A.j.g ENSGT00940000157956.o.b.e.b ENSGT00940000166305.B.g ENSGT00940000157536.a.b ENSGT00940000155114.o.b ENSGT00940000159306.b.a.c.a ENSGT00390000001520.c ENSGT00940000166571.c ENSGT00940000163239.h ENSGT00390000016048 ENSGT00950000182944.A.a.d #22 ENSGT00650000094922.c.b ENSGT00940000164481.b.b ENSGT00390000016213.i ENSGT00940000157181.d ENSGT01100000263497.D.g ENSGT00390000014835 ENSGT00940000175063 ENSGT00940000159256.o ENSGT00940000158431.a.a.a.a.b.a.c.b.b ENSGT00390000005826.a.a.u.b ENSGT00500000044869.a.b.n ENSGT00390000017045 ENSGT00940000156546.ab ENSGT00440000037341.b.b ENSGT00940000155312.b.f Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00950000182988.a.b.b.b.q.a.a ENSGT00700000104815.l ENSGT00700000104815.k.b ENSGT00700000104815.k.a ENSGT00730000111282.b.d ENSGT00940000153993.A.j.g ENSGT00940000157956.o.b.e.b ENSGT00940000166305.B.g ENSGT00940000157536.a.b ENSGT00940000155114.o.b ENSGT00940000159306.b.a.c.a ENSGT00390000001520.c ENSGT00940000166571.c ENSGT00940000163239.h ENSGT00390000016048 ENSGT00950000182944.A.a.d #22 ENSGT00650000094922.c.b ENSGT00940000164481.b.b ENSGT00390000016213.i ENSGT00940000157181.d ENSGT01100000263497.D.g ENSGT00390000014835 ENSGT00940000175063 ENSGT00940000159256.o ENSGT00940000158431.a.a.a.a.b.a.c.b.b ENSGT00390000005826.a.a.u.b ENSGT00500000044869.a.b.n ENSGT00390000017045 ENSGT00940000156546.ab ENSGT00440000037341.b.b ENSGT00940000155312.b.f Chinook salmon MODERN SPECIES 26 DCX (ENSOTSG00005005075) CAPN6 (ENSOTSG00005005067) PAK3 (ENSOTSG00005005040) her7 (ENSOTSG00005005038) her1 (ENSOTSG00005005037) mepcea (ENSOTSG00005005035) DLG4 (ENSOTSG00005004347) ephb4a (ENSOTSG00005004343) tnfsf13 (ENSOTSG00005004339) psmb6 (ENSOTSG00005004337) KCNAB3 (ENSOTSG00005003179) spag7 (ENSOTSG00005003159) chrdl2 (ENSOTSG00005003155) pold3 (ENSOTSG00005003151) ENSOTSG00005003148 NEU3 (ENSOTSG00005003141) #22 ENSOTSG00005003135 defbl2 (ENSOTSG00005003131) st14b (ENSOTSG00005003120) nfrkb (ENSOTSG00005003031) tmem45b (ENSOTSG00005002929) gng8 (ENSOTSG00005047214) sycn.2 (ENSOTSG00005047213) ENSOTSG00005047211 ENSOTSG00005047209 ENSOTSG00005047207 napaa (ENSOTSG00005047203) RSPH6A (ENSOTSG00005047200) SYMPK (ENSOTSG00005047198) ENSOTSG00005047177 im:7138535 (ENSOTSG00005047176) Coho salmon MODERN SPECIES 21 PAK3 (ENSOKIG00005049992) her7 (ENSOKIG00005049976) her7 (ENSOKIG00005049971) her7 (ENSOKIG00005049967) her7 (ENSOKIG00005049964) her1 (ENSOKIG00005049962) mepcea (ENSOKIG00005049960) DLG4 (ENSOKIG00005049897) ephb4a (ENSOKIG00005049858) tnfsf13 (ENSOKIG00005049851) PSMB6 (ENSOKIG00005049848) KCNAB3 (ENSOKIG00005049838) spag7 (ENSOKIG00005049823) chrdl2 (ENSOKIG00005049818) ENSOKIG00005049811 NEU3 (ENSOKIG00005049809) #22 defbl2 (ENSOKIG00005049807) st14b (ENSOKIG00005049804) nfrkb (ENSOKIG00005049797) tmem45b (ENSOKIG00005049790) gng8 (ENSOKIG00005049786) sycn.2 (ENSOKIG00005049782) ENSOKIG00005049780 ENSOKIG00005049772 ENSOKIG00005049767 napaa (ENSOKIG00005049734) RSPH6A (ENSOKIG00005049717) SYMPK (ENSOKIG00005049688) ENSOKIG00005049610 im:7138535 (ENSOKIG00005049601) ENSOKIG00005049597 Rainbow trout MODERN SPECIES 364 her7 (ENSOMYG00000075219) her1 (ENSOMYG00000036410) mepcea (ENSOMYG00000036417) ENSOMYG00000036450 ephb4a (ENSOMYG00000055315) ENSOMYG00000074215 ENSOMYG00000055695 tnfsf13 (ENSOMYG00000036508) ENSOMYG00000036493 ENSOMYG00000036765 ENSOMYG00000039211 ENSOMYG00000039221 ENSOMYG00000058486 ENSOMYG00000062975 ENSOMYG00000039235 ENSOMYG00000039262 #22 ENSOMYG00000064410 st14b (ENSOMYG00000039274) nfrkb (ENSOMYG00000039365) tmem45b (ENSOMYG00000039451) ENSOMYG00000052403 gng8 (ENSOMYG00000060005) sycn.2 (ENSOMYG00000039942) ENSOMYG00000065741 ENSOMYG00000073264 ENSOMYG00000039952 ENSOMYG00000039955 napaa (ENSOMYG00000039684) ENSOMYG00000040039 ENSOMYG00000040287 ENSOMYG00000040902 Huchen MODERN SPECIES 401 ENSHHUG00000003279 ENSHHUG00000003272 tnfsf13 (ENSHHUG00000003246) PSMB6 (ENSHHUG00000003220) KCNAB3 (ENSHHUG00000003168) spag7 (ENSHHUG00000003139) chrdl2 (ENSHHUG00000003096) pold3 (ENSHHUG00000003082) ENSHHUG00000003069 NEU3 (ENSHHUG00000003065) #22 wdr73 (ENSHHUG00000003058) defbl2 (ENSHHUG00000003016) st14b (ENSHHUG00000003010) nfrkb (ENSHHUG00000003000) tmem45b (ENSHHUG00000002985) gng8 (ENSHHUG00000002971) sycn.2 (ENSHHUG00000002961) ENSHHUG00000002955 ENSHHUG00000002945 napaa (ENSHHUG00000002555) ENSHHUG00000002465 SYMPK (ENSHHUG00000002239) ENSHHUG00000002053 im:7138535 (ENSHHUG00000002029) zgc:153345 (ENSHHUG00000002015) Northern pike MODERN SPECIES 6 PAK3 (ENSELUG00000001587) her7 (ENSELUG00000025242) her7 (ENSELUG00000018519) her1 (ENSELUG00000033502) mepcea (ENSELUG00000018561) DLG4 (ENSELUG00000018741) ephb4a (ENSELUG00000018814) ENSELUG00000029460 tnfsf13 (ENSELUG00000018833) psmb6 (ENSELUG00000018917) KCNAB3 (ENSELUG00000018953) spag7 (ENSELUG00000018959) chrdl2 (ENSELUG00000019011) pold3 (ENSELUG00000019068) ENSELUG00000030086 neu3.5 (ENSELUG00000031402) #22 wdr73 (ENSELUG00000019094) defbl2 (ENSELUG00000019103) st14b (ENSELUG00000000812) nfrkb (ENSELUG00000019186) tmem45b (ENSELUG00000019210) gng8 (ENSELUG00000025754) sycn.2 (ENSELUG00000019231) ENSELUG00000019250 EHD2 (ENSELUG00000019299) ENSELUG00000019352 ENSELUG00000019308 napaa (ENSELUG00000019393) RSPH6A (ENSELUG00000019472) SYMPK (ENSELUG00000000850) HNRNPUL1 (ENSELUG00000019520) Acanthomorphata ANCESTRAL SPECIES 194 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000161570 ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 Euacanthomorphacea ANCESTRAL SPECIES 20 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000161570 ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000178850 ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000178850 ENSGT00940000159458.e.a ENSGT00940000154361.A Tiger tail seahorse MODERN SPECIES 214 ENSHCOG00000001884 klhl13 (ENSHCOG00000001866) WDR44 (ENSHCOG00000001853) zgc:163098 (ENSHCOG00000001838) ENSHCOG00000001828 ENSHCOG00000001819 il13ra2 (ENSHCOG00000001808) ENSHCOG00000001782 ENSHCOG00000001775 CAPN6 (ENSHCOG00000001768) PAK3 (ENSHCOG00000001751) mepcea (ENSHCOG00000001737) defbl2 (ENSHCOG00000001728) spag7 (ENSHCOG00000001721) chrdl2 (ENSHCOG00000001717) neu3.1 (ENSHCOG00000001706) #22 KCNAB3 (ENSHCOG00000000057) ephb4a (ENSHCOG00000001430) DLG4 (ENSHCOG00000001414) zbtb20 (ENSHCOG00000001402) slc25a5 (ENSHCOG00000001394) ENSHCOG00000001386 cdc23 (ENSHCOG00000001380) zgc:175280 (ENSHCOG00000001352) CASR (ENSHCOG00000001307) CASR (ENSHCOG00000001304) b4galt4 (ENSHCOG00000001297) ENSHCOG00000001294 ENSHCOG00000021019 gsx1 (ENSHCOG00000021013) ENSHCOG00000020973 Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Ovalentaria ANCESTRAL SPECIES 11 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00940000170012.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Aplocheiloidei ANCESTRAL SPECIES 23 ENSGT00940000162696.c.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000178850 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Mangrove rivulus MODERN SPECIES 165 ENSKMAG00000009578 ENSKMAG00000009593 klhl13 (ENSKMAG00000009629) WDR44 (ENSKMAG00000009668) zgc:163098 (ENSKMAG00000009727) LRCH2 (ENSKMAG00000009841) il13ra2 (ENSKMAG00000009902) ENSKMAG00000009921 ENSKMAG00000009938 ENSKMAG00000009963 ENSKMAG00000010018 mepcea (ENSKMAG00000010102) ENSKMAG00000010125 spag7 (ENSKMAG00000010156) chrdl2 (ENSKMAG00000010174) neu3.1 (ENSKMAG00000010198) #22 KCNAB3 (ENSKMAG00000010218) Turquoise killifish MODERN SPECIES 1620 WDR44 (ENSNFUG00015006676) zgc:163098 (ENSNFUG00015006653) ENSNFUG00015006635 LRCH2 (ENSNFUG00015006622) il13ra2 (ENSNFUG00015006619) ENSNFUG00015006615 DCX (ENSNFUG00015006611) CAPN6 (ENSNFUG00015006456) PAK3 (ENSNFUG00015006197) ENSNFUG00015006116 MEPCE (ENSNFUG00015006107) ENSNFUG00015006100 SPAG7 (ENSNFUG00015006089) CHRDL2 (ENSNFUG00015006064) ENSNFUG00015006047 NEU3 (ENSNFUG00015006042) #22 KCNAB3 (ENSNFUG00015005992) ephb4a (ENSNFUG00015005893) DLG4 (ENSNFUG00015005156) zbtb20 (ENSNFUG00015004957) SLC25A6 (ENSNFUG00015004935) GFRA3 (ENSNFUG00015004922) KIF20A (ENSNFUG00015004800) CASR (ENSNFUG00015004766) ENSNFUG00015004755 B4GALT4 (ENSNFUG00015004747) ENSNFUG00015004741 ENSNFUG00015004730 GSX1 (ENSNFUG00015023772) ATP6V1A (ENSNFUG00015023769) ZDHHC23A (ENSNFUG00015023765) Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00940000170012.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Poeciliinae ANCESTRAL SPECIES 17 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b.e ENSGT00940000156128.b.f ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Poecilia ANCESTRAL SPECIES 7 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b.e ENSGT00940000156128.b.f.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 NAME_6 ANCESTRAL SPECIES 1 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b.e.b ENSGT00940000156128.b.e.a ENSGT00940000156128.b.f.b ENSGT00940000156128.b.f.a ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 ENSGT00950000182962.a.a.c Amazon molly MODERN SPECIES 255 ENSPFOG00000019448 ENSPFOG00000023813 PAK3 (ENSPFOG00000019435) mepcea (ENSPFOG00000019428) defbl2 (ENSPFOG00000019427) spag7 (ENSPFOG00000019424) chrdl2 (ENSPFOG00000019419) ENSPFOG00000022329 neu3.1 (ENSPFOG00000019416) #22 KCNAB3 (ENSPFOG00000019413) ephb4a (ENSPFOG00000019399) DLG4 (ENSPFOG00000019381) zbtb20 (ENSPFOG00000019375) slc25a5 (ENSPFOG00000019373) ENSPFOG00000019369 cdc23 (ENSPFOG00000019353) kif20a (ENSPFOG00000019347) zgc:175280 (ENSPFOG00000019339) CASR (ENSPFOG00000019334) b4galt4 (ENSPFOG00000019331) ENSPFOG00000019327 gsx1 (ENSPFOG00000019324) ENSPFOG00000019323 ENSPFOG00000019318 Sailfin molly MODERN SPECIES 1222 mepcea (ENSPLAG00000014396) defbl2 (ENSPLAG00000014405) spag7 (ENSPLAG00000014413) chrdl2 (ENSPLAG00000014451) ENSPLAG00000014464 neu3.1 (ENSPLAG00000014471) #22 KCNAB3 (ENSPLAG00000014495) ephb4a (ENSPLAG00000014544) Guppy MODERN SPECIES 444 ENSPREG00000023048 klhl13 (ENSPREG00000023051) WDR44 (ENSPREG00000023057) zgc:163098 (ENSPREG00000023067) ENSPREG00000023074 il13ra2 (ENSPREG00000023076) ENSPREG00000023078 ENSPREG00000023081 ENSPREG00000023084 CAPN6 (ENSPREG00000023091) PAK3 (ENSPREG00000023104) mepcea (ENSPREG00000023111) defbl2 (ENSPREG00000023112) spag7 (ENSPREG00000023114) chrdl2 (ENSPREG00000023118) neu3.1 (ENSPREG00000023121) #22 KCNAB3 (ENSPREG00000023124) ephb4a (ENSPREG00000023130) DLG4 (ENSPREG00000023140) zbtb20 (ENSPREG00000023147) slc25a5 (ENSPREG00000023150) ENSPREG00000023153 cdc23 (ENSPREG00000023155) kif20a (ENSPREG00000023160) zgc:175280 (ENSPREG00000023164) aifm1 (ENSPREG00000023168) glra4b (ENSPREG00000000615) ENSPREG00000000825 msi2a (ENSPREG00000000881) ENSPREG00000000950 ENSPREG00000000960 Platyfish MODERN SPECIES 2 ENSXMAG00000023119 klhl13 (ENSXMAG00000012602) WDR44 (ENSXMAG00000012621) zgc:163098 (ENSXMAG00000012662) LRCH2 (ENSXMAG00000012688) il13ra2 (ENSXMAG00000012711) ENSXMAG00000027031 ENSXMAG00000012721 ENSXMAG00000012735 PAK3 (ENSXMAG00000012751) mepcea (ENSXMAG00000027456) defbl2 (ENSXMAG00000023191) spag7 (ENSXMAG00000024624) chrdl2 (ENSXMAG00000029664) ENSXMAG00000021167 neu3.1 (ENSXMAG00000012775) #22 KCNAB3 (ENSXMAG00000027861) ephb4a (ENSXMAG00000012812) DLG4 (ENSXMAG00000012882) zbtb20 (ENSXMAG00000012908) slc25a5 (ENSXMAG00000020938) ENSXMAG00000012915 cdc23 (ENSXMAG00000028922) kif20a (ENSXMAG00000012940) zgc:175280 (ENSXMAG00000012958) CASR (ENSXMAG00000012971) b4galt4 (ENSXMAG00000012973) ENSXMAG00000012978 ENSXMAG00000012980 ENSXMAG00000011611 ATP6V1A (ENSXMAG00000012982) NAME_4 ANCESTRAL SPECIES 5 ENSGT00940000154359.o ENSGT00940000154359.p ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b.j ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 ENSGT00950000182962.a.a.c Sheepshead minnow MODERN SPECIES 540 sox9a (ENSCVAG00000023444) ENSCVAG00000023445 ENSCVAG00000023446 ENSCVAG00000023447 PAK3 (ENSCVAG00000023448) mepcea (ENSCVAG00000023449) defbl2 (ENSCVAG00000023450) spag7 (ENSCVAG00000023451) chrdl2 (ENSCVAG00000023452) neu3.1 (ENSCVAG00000023453) #22 KCNAB3 (ENSCVAG00000023454) ephb4a (ENSCVAG00000023455) DLG4 (ENSCVAG00000023456) Mummichog MODERN SPECIES 693 ENSFHEG00000014136 WDR44 (ENSFHEG00000014153) zgc:163098 (ENSFHEG00000014263) LRCH2 (ENSFHEG00000014312) il13ra2 (ENSFHEG00000014321) ENSFHEG00000014355 ENSFHEG00000014383 ENSFHEG00000014401 PAK3 (ENSFHEG00000014416) mepcea (ENSFHEG00000014422) defbl2 (ENSFHEG00000014431) spag7 (ENSFHEG00000014441) chrdl2 (ENSFHEG00000014449) ENSFHEG00000014455 neu3.1 (ENSFHEG00000014463) #22 KCNAB3 (ENSFHEG00000000705) ephb4a (ENSFHEG00000014581) DLG4 (ENSFHEG00000014627) zbtb20 (ENSFHEG00000014650) slc25a5 (ENSFHEG00000014680) ENSFHEG00000014699 cdc23 (ENSFHEG00000014759) kif20a (ENSFHEG00000014776) zgc:175280 (ENSFHEG00000014818) CASR (ENSFHEG00000015075) ENSFHEG00000015094 ENSFHEG00000015102 gsx1 (ENSFHEG00000015114) ENSFHEG00000015125 ENSFHEG00000015150 Oryzias ANCESTRAL SPECIES 14 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b.h ENSGT01030000235286 ENSGT00940000156128.b.g ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Oryzias_a ANCESTRAL SPECIES 2 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT01030000235286 ENSGT00940000156128.b.g ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571.e ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Japanese Medaka HdrR MODERN SPECIES 5 klhl13 (ENSORLG00000007208) WDR44 (ENSORLG00000007184) zgc:163098 (ENSORLG00000007141) LRCH2 (ENSORLG00000007113) il13ra2 (ENSORLG00000007069) ENSORLG00000007061 ENSORLG00000028908 ENSORLG00000022730 ENSORLG00000007043 PAK3 (ENSORLG00000007006) mepcea (ENSORLG00000027617) defbl2 (ENSORLG00000029256) spag7 (ENSORLG00000029507) chrdl2 (ENSORLG00000006973) ENSORLG00000006960 neu3.1 (ENSORLG00000028485) #22 KCNAB3 (ENSORLG00000006941) ENSORLG00000030463 ephb4a (ENSORLG00000006909) DLG4 (ENSORLG00000006845) zbtb20 (ENSORLG00000025378) ENSORLG00000006789 ENSORLG00000006782 cdc23 (ENSORLG00000006778) kif20a (ENSORLG00000006748) zgc:175280 (ENSORLG00000006716) CASR (ENSORLG00000006682) b4galt4 (ENSORLG00000006677) ENSORLG00000022920 ENSORLG00000006672 gsx1 (ENSORLG00000006664) Chinese medaka MODERN SPECIES 717 zgc:163098 (ENSOSIG00000024015) ENSOSIG00000024016 ENSOSIG00000024017 ENSOSIG00000024018 il13ra2 (ENSOSIG00000003790) ENSOSIG00000003797 ENSOSIG00000003805 ENSOSIG00000003840 ENSOSIG00000003925 PAK3 (ENSOSIG00000003993) mepcea (ENSOSIG00000006021) ENSOSIG00000006022 spag7 (ENSOSIG00000006024) ENSOSIG00000006025 ENSOSIG00000006029 neu3.1 (ENSOSIG00000006030) #22 KCNAB3 (ENSOSIG00000006034) ephb4a (ENSOSIG00000006070) DLG4 (ENSOSIG00000006106) zbtb20 (ENSOSIG00000010299) slc25a5 (ENSOSIG00000010301) ENSOSIG00000010304 cdc23 (ENSOSIG00000010313) kif20a (ENSOSIG00000010768) zgc:175280 (ENSOSIG00000010818) CASR (ENSOSIG00000010849) b4galt4 (ENSOSIG00000010850) ENSOSIG00000010851 gsx1 (ENSOSIG00000010852) ENSOSIG00000010853 ATP6V1A (ENSOSIG00000010886) Oryzias_b ANCESTRAL SPECIES 13 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT01030000235286 ENSGT00940000156128.b.g ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 ENSGT00950000182962.a.a.c Javanese ricefish MODERN SPECIES 5 klhl13 (ENSOJAG00000007961) WDR44 (ENSOJAG00000008216) LRCH2 (ENSOJAG00000009038) il13ra2 (ENSOJAG00000009055) ENSOJAG00000009074 ENSOJAG00000009094 ENSOJAG00000009126 ENSOJAG00000009214 ENSOJAG00000009280 PAK3 (ENSOJAG00000009632) mepcea (ENSOJAG00000010230) ENSOJAG00000010239 spag7 (ENSOJAG00000010259) chrdl2 (ENSOJAG00000010282) ENSOJAG00000010292 neu3.1 (ENSOJAG00000010304) #22 KCNAB3 (ENSOJAG00000010444) ephb4a (ENSOJAG00000011767) DLG4 (ENSOJAG00000012147) zbtb20 (ENSOJAG00000014619) slc25a5 (ENSOJAG00000014638) ENSOJAG00000014688 cdc23 (ENSOJAG00000014709) kif20a (ENSOJAG00000014973) zgc:175280 (ENSOJAG00000015419) CASR (ENSOJAG00000015518) b4galt4 (ENSOJAG00000015548) ENSOJAG00000015560 gsx1 (ENSOJAG00000015778) ENSOJAG00000015794 ENSOJAG00000015829 Indian medaka MODERN SPECIES 4 ENSOMEG00000002113 ENSOMEG00000002106 ENSOMEG00000002099 ENSOMEG00000002096 ENSOMEG00000000890 ENSOMEG00000002090 ENSOMEG00000000647 ENSOMEG00000002083 CAPN6 (ENSOMEG00000002072) PAK3 (ENSOMEG00000000022) mepcea (ENSOMEG00000002027) ENSOMEG00000002020 spag7 (ENSOMEG00000002015) chrdl2 (ENSOMEG00000002002) ENSOMEG00000001984 neu3.1 (ENSOMEG00000001975) #22 KCNAB3 (ENSOMEG00000001963) ephb4a (ENSOMEG00000001930) DLG4 (ENSOMEG00000001894) zbtb20 (ENSOMEG00000022583) slc25a5 (ENSOMEG00000022568) ENSOMEG00000022535 ENSOMEG00000022513 cdc23 (ENSOMEG00000022499) kif20a (ENSOMEG00000022448) zgc:175280 (ENSOMEG00000000588) CASR (ENSOMEG00000022274) b4galt4 (ENSOMEG00000022251) ENSOMEG00000022228 ENSOMEG00000022186 gsx1 (ENSOMEG00000022169) Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Pomacentridae ANCESTRAL SPECIES 10 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 ENSGT00950000182962.a.a.c Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 ENSGT00950000182962.a.a.c Amphiprion ANCESTRAL SPECIES 3 ENSGT00940000170012.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 ENSGT00950000182962.a.a.c Orange clownfish MODERN SPECIES 6 klhl13 (ENSAPEG00000001532) WDR44 (ENSAPEG00000001435) zgc:163098 (ENSAPEG00000001348) LRCH2 (ENSAPEG00000001259) il13ra2 (ENSAPEG00000001250) ENSAPEG00000001230 ENSAPEG00000001202 ENSAPEG00000001181 CAPN6 (ENSAPEG00000001173) PAK3 (ENSAPEG00000001106) mepcea (ENSAPEG00000001077) defbl2 (ENSAPEG00000001050) spag7 (ENSAPEG00000001023) chrdl2 (ENSAPEG00000000959) ENSAPEG00000000948 neu3.1 (ENSAPEG00000000939) #22 KCNAB3 (ENSAPEG00000000865) ephb4a (ENSAPEG00000000843) ENSAPEG00000000823 DLG4 (ENSAPEG00000000772) zbtb20 (ENSAPEG00000000755) slc25a5 (ENSAPEG00000000725) ENSAPEG00000000633 cdc23 (ENSAPEG00000000605) kif20a (ENSAPEG00000000528) zgc:175280 (ENSAPEG00000000390) CASR (ENSAPEG00000000343) b4galt4 (ENSAPEG00000000316) ENSAPEG00000024542 ENSAPEG00000024539 gsx1 (ENSAPEG00000024536) Clown anemonefish MODERN SPECIES 3194 chrdl2 (ENSAOCG00000023759) ENSAOCG00000001736 neu3.1 (ENSAOCG00000023732) #22 KCNAB3 (ENSAOCG00000023721) ephb4a (ENSAOCG00000023692) DLG4 (ENSAOCG00000001698) zbtb20 (ENSAOCG00000001687) slc25a5 (ENSAOCG00000023538) ENSAOCG00000023517 cdc23 (ENSAOCG00000023487) kif20a (ENSAOCG00000023445) zgc:175280 (ENSAOCG00000023389) CASR (ENSAOCG00000002065) b4galt4 (ENSAOCG00000023124) ENSAOCG00000023116 gsx1 (ENSAOCG00000023111) ENSAOCG00000023098 ENSAOCG00000023080 Spiny chromis MODERN SPECIES 87 klhl4 (ENSAPOG00000005078) ENSAPOG00000005148 ENSAPOG00000005192 mepcea (ENSAPOG00000005209) defbl2 (ENSAPOG00000005234) spag7 (ENSAPOG00000005268) chrdl2 (ENSAPOG00000005282) ENSAPOG00000005302 neu3.1 (ENSAPOG00000005320) #22 KCNAB3 (ENSAPOG00000005907) ephb4a (ENSAPOG00000006005) DLG4 (ENSAPOG00000006156) zbtb20 (ENSAPOG00000006197) slc25a5 (ENSAPOG00000006216) ENSAPOG00000006231 cdc23 (ENSAPOG00000006290) kif20a (ENSAPOG00000006379) zgc:175280 (ENSAPOG00000006459) CASR (ENSAPOG00000006738) b4galt4 (ENSAPOG00000006778) ENSAPOG00000006796 ARHGAP31 (ENSAPOG00000006810) gsx1 (ENSAPOG00000006823) ENSAPOG00000006857 Bicolor damselfish MODERN SPECIES 303 ENSSPAG00000000827 klhl13 (ENSSPAG00000000834) WDR44 (ENSSPAG00000000856) zgc:163098 (ENSSPAG00000000916) LRCH2 (ENSSPAG00000000932) il13ra2 (ENSSPAG00000001044) ENSSPAG00000001052 ENSSPAG00000001066 CAPN6 (ENSSPAG00000001103) PAK3 (ENSSPAG00000001121) mepcea (ENSSPAG00000001215) defbl2 (ENSSPAG00000001220) spag7 (ENSSPAG00000001236) chrdl2 (ENSSPAG00000001249) ENSSPAG00000001279 neu3.1 (ENSSPAG00000001287) #22 KCNAB3 (ENSSPAG00000001367) ephb4a (ENSSPAG00000002280) DLG4 (ENSSPAG00000002389) zbtb20 (ENSSPAG00000002466) slc25a5 (ENSSPAG00000002476) ENSSPAG00000002519 cdc23 (ENSSPAG00000002552) kif20a (ENSSPAG00000002610) zgc:175280 (ENSSPAG00000002654) CASR (ENSSPAG00000002702) b4galt4 (ENSSPAG00000002731) ENSSPAG00000002737 gsx1 (ENSSPAG00000002754) ENSSPAG00000002775 ATP6V1A (ENSSPAG00000002871) Cichlidae ANCESTRAL SPECIES 4 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Pseudocrenilabrinae_A ANCESTRAL SPECIES 21 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Haplochromini ANCESTRAL SPECIES 8 ENSGT00940000170012.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00940000167349 Burton s mouthbrooder MODERN SPECIES 316 ENSHBUG00000022865 klhl13 (ENSHBUG00000022852) WDR44 (ENSHBUG00000022792) zgc:163098 (ENSHBUG00000022716) LRCH2 (ENSHBUG00000022582) il13ra2 (ENSHBUG00000022573) ENSHBUG00000022549 ENSHBUG00000022513 ENSHBUG00000022468 PAK3 (ENSHBUG00000022441) mepcea (ENSHBUG00000022377) ENSHBUG00000022371 spag7 (ENSHBUG00000022355) chrdl2 (ENSHBUG00000022343) ENSHBUG00000022335 neu3.1 (ENSHBUG00000022320) #22 KCNAB3 (ENSHBUG00000022306) ephb4a (ENSHBUG00000022249) DLG4 (ENSHBUG00000021892) zbtb20 (ENSHBUG00000021810) slc25a5 (ENSHBUG00000021794) ENSHBUG00000021756 cdc23 (ENSHBUG00000021740) kif20a (ENSHBUG00000021672) zgc:175280 (ENSHBUG00000021656) CASR (ENSHBUG00000021647) b4galt4 (ENSHBUG00000021627) ENSHBUG00000021621 ENSHBUG00000021606 gsx1 (ENSHBUG00000021594) ENSHBUG00000021585 Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00940000170012.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000176877.a.a.b ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A Haplochromini_B ANCESTRAL SPECIES 26 ENSGT00940000170012.b ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000176877.a.a.b ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A Zebra mbuna MODERN SPECIES 1092 ENSMZEG00005016764 ENSMZEG00005016767 klhl13 (ENSMZEG00005016775) WDR44 (ENSMZEG00005016787) zgc:163098 (ENSMZEG00005016805) LRCH2 (ENSMZEG00005016833) il13ra2 (ENSMZEG00005016847) ENSMZEG00005016855 ENSMZEG00005016861 ENSMZEG00005016867 PAK3 (ENSMZEG00005016881) mepcea (ENSMZEG00005016927) defbl2 (ENSMZEG00005016935) spag7 (ENSMZEG00005016948) chrdl2 (ENSMZEG00005016967) neu3.1 (ENSMZEG00005016972) #22 KCNAB3 (ENSMZEG00005016976) ephb4a (ENSMZEG00005017020) DLG4 (ENSMZEG00005017060) zbtb20 (ENSMZEG00005017078) slc25a5 (ENSMZEG00005017085) ENSMZEG00005017094 cdc23 (ENSMZEG00005017099) kif20a (ENSMZEG00005017113) zgc:175280 (ENSMZEG00005017124) CASR (ENSMZEG00005017168) b4galt4 (ENSMZEG00005018344) ENSMZEG00005018346 gsx1 (ENSMZEG00005018350) ENSMZEG00005018353 ATP6V1A (ENSMZEG00005018360) Eastern happy MODERN SPECIES 1 ENSACLG00000016521 klhl13 (ENSACLG00000016535) WDR44 (ENSACLG00000016595) zgc:163098 (ENSACLG00000016647) LRCH2 (ENSACLG00000016781) il13ra2 (ENSACLG00000016811) ENSACLG00000016835 ENSACLG00000016853 ENSACLG00000016898 PAK3 (ENSACLG00000016946) mepcea (ENSACLG00000017089) ENSACLG00000017111 spag7 (ENSACLG00000017150) chrdl2 (ENSACLG00000017255) ENSACLG00000017285 neu3.1 (ENSACLG00000017325) #22 KCNAB3 (ENSACLG00000017346) ephb4a (ENSACLG00000017429) DLG4 (ENSACLG00000017536) zbtb20 (ENSACLG00000017873) slc25a5 (ENSACLG00000017899) ENSACLG00000017944 cdc23 (ENSACLG00000017972) kif20a (ENSACLG00000018065) ENSACLG00000018119 zgc:175280 (ENSACLG00000018154) CASR (ENSACLG00000018246) b4galt4 (ENSACLG00000018259) ENSACLG00000018269 ENSACLG00000018286 gsx1 (ENSACLG00000018323) P. nyererei MODERN SPECIES 359 ENSPNYG00000016644 ENSPNYG00000016626 klhl13 (ENSPNYG00000016602) WDR44 (ENSPNYG00000016554) zgc:163098 (ENSPNYG00000016481) LRCH2 (ENSPNYG00000016401) il13ra2 (ENSPNYG00000016382) ENSPNYG00000016317 ENSPNYG00000016293 ENSPNYG00000016119 PAK3 (ENSPNYG00000015725) mepcea (ENSPNYG00000015597) defbl2 (ENSPNYG00000015587) spag7 (ENSPNYG00000015519) chrdl2 (ENSPNYG00000015500) neu3.1 (ENSPNYG00000015488) #22 KCNAB3 (ENSPNYG00000015455) ephb4a (ENSPNYG00000015420) DLG4 (ENSPNYG00000015386) zbtb20 (ENSPNYG00000015366) slc25a5 (ENSPNYG00000015346) ENSPNYG00000015313 cdc23 (ENSPNYG00000015257) kif20a (ENSPNYG00000015214) ENSPNYG00000015194 zgc:175280 (ENSPNYG00000015150) CASR (ENSPNYG00000014966) b4galt4 (ENSPNYG00000014923) ENSPNYG00000014906 ENSPNYG00000014892 gsx1 (ENSPNYG00000014873) Lyretail cichlid MODERN SPECIES 378 ENSNBRG00000021161 klhl13 (ENSNBRG00000021173) WDR44 (ENSNBRG00000021189) zgc:163098 (ENSNBRG00000021199) LRCH2 (ENSNBRG00000021243) ENSNBRG00000021271 il13ra2 (ENSNBRG00000021286) ENSNBRG00000021302 ENSNBRG00000021317 CAPN6 (ENSNBRG00000021345) PAK3 (ENSNBRG00000021502) mepcea (ENSNBRG00000021532) defbl2 (ENSNBRG00000021537) spag7 (ENSNBRG00000021547) chrdl2 (ENSNBRG00000021556) neu3.1 (ENSNBRG00000021580) #22 KCNAB3 (ENSNBRG00000021597) ephb4a (ENSNBRG00000021627) DLG4 (ENSNBRG00000021684) zbtb20 (ENSNBRG00000021723) slc25a5 (ENSNBRG00000021746) ENSNBRG00000021796 cdc23 (ENSNBRG00000021843) kif20a (ENSNBRG00000021876) zgc:175280 (ENSNBRG00000021916) ENSNBRG00000021971 CASR (ENSNBRG00000022021) b4galt4 (ENSNBRG00000022133) ENSNBRG00000022141 ENSNBRG00000022153 gsx1 (ENSNBRG00000022162) Nile tilapia MODERN SPECIES 1 ENSONIG00000039571 ENSONIG00000005278 klhl13 (ENSONIG00000005275) WDR44 (ENSONIG00000005269) zgc:163098 (ENSONIG00000005263) LRCH2 (ENSONIG00000005258) il13ra2 (ENSONIG00000005254) ENSONIG00000033591 DCX (ENSONIG00000027531) ENSONIG00000005243 PAK3 (ENSONIG00000005232) mepcea (ENSONIG00000033327) ENSONIG00000023994 spag7 (ENSONIG00000005227) chrdl2 (ENSONIG00000005224) neu3a (ENSONIG00000005223) #22 KCNAB3 (ENSONIG00000005215) ephb4a (ENSONIG00000005204) DLG4 (ENSONIG00000005194) zbtb20 (ENSONIG00000005193) slc25a5 (ENSONIG00000002822) ENSONIG00000005188 cdc23 (ENSONIG00000005184) ENSONIG00000037585 kif20a (ENSONIG00000005177) zgc:175280 (ENSONIG00000005172) CASR (ENSONIG00000005168) b4galt4 (ENSONIG00000005167) ENSONIG00000005164 gsx1 (ENSONIG00000005163) ENSONIG00000005160 Midas cichlid MODERN SPECIES 888 defbl2 (ENSACIG00000000700) spag7 (ENSACIG00000000715) chrdl2 (ENSACIG00000000746) neu3.1 (ENSACIG00000000776) #22 KCNAB3 (ENSACIG00000000796) ephb4a (ENSACIG00000000842) DLG4 (ENSACIG00000000887) ENSACIG00000000936 zbtb20 (ENSACIG00000000946) slc25a5 (ENSACIG00000000952) ENSACIG00000000971 cdc23 (ENSACIG00000000994) kif20a (ENSACIG00000001045) zgc:175280 (ENSACIG00000001095) CASR (ENSACIG00000001191) b4galt4 (ENSACIG00000001214) ENSACIG00000001232 gsx1 (ENSACIG00000001245) ENSACIG00000001273 Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Eupercaria ANCESTRAL SPECIES 17 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Tetraodontidae ANCESTRAL SPECIES 6 ENSGT00940000179312 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154622.a.b.m ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b ENSGT00940000156558.a.b Fugu MODERN SPECIES 6 ENSTRUG00000024988 ENSTRUG00000020929 klhl13 (ENSTRUG00000016735) WDR44 (ENSTRUG00000016743) LRCH2 (ENSTRUG00000016753) ENSTRUG00000016772 ENSTRUG00000031958 DCX (ENSTRUG00000016775) ENSTRUG00000016780 PAK3 (ENSTRUG00000016790) mepcea (ENSTRUG00000023614) ENSTRUG00000022488 spag7 (ENSTRUG00000016806) chrdl2 (ENSTRUG00000016808) ENSTRUG00000027911 neu3.1 (ENSTRUG00000022280) #22 KCNAB3 (ENSTRUG00000016817) ephb4a (ENSTRUG00000016825) DLG4 (ENSTRUG00000016826) zbtb20 (ENSTRUG00000016839) ants6 (ENSTRUG00000016841) ENSTRUG00000016846 cdc23 (ENSTRUG00000016848) kif20a (ENSTRUG00000016852) zgc:175280 (ENSTRUG00000016862) CASR (ENSTRUG00000016870) b4galt4 (ENSTRUG00000016879) ENSTRUG00000032078 ENSTRUG00000016892 ENSTRUG00000016893 ATP6V1A (ENSTRUG00000016898) Tetraodon MODERN SPECIES 22 dpf2 (ENSTNIG00000010057) SPTBN2 (ENSTNIG00000010056) LTBP3 (ENSTNIG00000010055) ENSTNIG00000010054 klhl13 (ENSTNIG00000010053) WDR44 (ENSTNIG00000010052) LRCH2 (ENSTNIG00000010051) il13ra2 (ENSTNIG00000001799) ENSTNIG00000010050 DCX (ENSTNIG00000010049) ENSTNIG00000010048 PAK3 (ENSTNIG00000010047) mepcea (ENSTNIG00000010046) spag7 (ENSTNIG00000010045) chrdl2 (ENSTNIG00000010044) neu3.1 (ENSTNIG00000010043) #22 KCNAB3 (ENSTNIG00000010042) ENSTNIG00000010041 ephb4a (ENSTNIG00000010040) DLG4 (ENSTNIG00000010039) zbtb20 (ENSTNIG00000010038) ENSTNIG00000010037 ENSTNIG00000010036 cdc23 (ENSTNIG00000010035) kif20a (ENSTNIG00000010034) zgc:175280 (ENSTNIG00000010033) CASR (ENSTNIG00000010032) b4galt4 (ENSTNIG00000010031) ENSTNIG00000010030 ENSTNIG00000010029 ENSTNIG00000000759 Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Ballan wrasse MODERN SPECIES 56 rps14 (ENSLBEG00000002421) WDR44 (ENSLBEG00000002455) zgc:163098 (ENSLBEG00000002498) LRCH2 (ENSLBEG00000002683) il13ra2 (ENSLBEG00000002719) ENSLBEG00000002745 ENSLBEG00000002765 ENSLBEG00000002796 ENSLBEG00000002820 PAK3 (ENSLBEG00000002856) mepcea (ENSLBEG00000002932) defbl2 (ENSLBEG00000002947) spag7 (ENSLBEG00000002961) chrdl2 (ENSLBEG00000002978) ENSLBEG00000002995 neu3.1 (ENSLBEG00000003026) #22 KCNAB3 (ENSLBEG00000003037) ephb4a (ENSLBEG00000003073) DLG4 (ENSLBEG00000003177) zbtb20 (ENSLBEG00000003299) slc25a5 (ENSLBEG00000003333) ENSLBEG00000003363 cdc23 (ENSLBEG00000003397) kif20a (ENSLBEG00000003479) zgc:175280 (ENSLBEG00000003521) CASR (ENSLBEG00000003570) b4galt4 (ENSLBEG00000003593) ENSLBEG00000003615 gsx1 (ENSLBEG00000003628) ENSLBEG00000003642 ATP6V1A (ENSLBEG00000003686) Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b ENSGT00940000156558.a.b ENSGT01050000244868.c.b Gilthead seabream MODERN SPECIES 4 ENSSAUG00010025595 klhl13 (ENSSAUG00010025596) WDR44 (ENSSAUG00010025602) zgc:163098 (ENSSAUG00010025815) LRCH2 (ENSSAUG00010025830) il13ra2 (ENSSAUG00010025832) ENSSAUG00010025833 ENSSAUG00010025834 CAPN6 (ENSSAUG00010025836) PAK3 (ENSSAUG00010025886) mepcea (ENSSAUG00010026538) defbl2 (ENSSAUG00010026539) spag7 (ENSSAUG00010026541) chrdl2 (ENSSAUG00010026542) ENSSAUG00010026544 neu3.1 (ENSSAUG00010026547) #22 KCNAB3 (ENSSAUG00010026552) ephb4a (ENSSAUG00010026574) DLG4 (ENSSAUG00010026607) zbtb20 (ENSSAUG00010026646) SLC25A5 (ENSSAUG00010026647) ENSSAUG00010026649 cdc23 (ENSSAUG00010026651) kif20a (ENSSAUG00010001529) zgc:175280 (ENSSAUG00010001799) CASR (ENSSAUG00010001814) b4galt4 (ENSSAUG00010001823) ENSSAUG00010001831 ENSSAUG00010001837 ENSSAUG00010001841 ATP6V1A (ENSSAUG00010001843) Eupercaria_incertae_sedis ANCESTRAL SPECIES 12 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b ENSGT00940000156558.a.b ENSGT01050000244868.c.b European seabass MODERN SPECIES 4 ENSDLAG00005001102 klhl13 (ENSDLAG00005001115) ENSDLAG00005001188 zgc:163098 (ENSDLAG00005001664) ENSDLAG00005028992 ENSDLAG00005001750 il13ra2 (ENSDLAG00005001759) ENSDLAG00005031440 ENSDLAG00005001774 ENSDLAG00005001788 ENSDLAG00005001894 ENSDLAG00005001988 ENSDLAG00005001996 ENSDLAG00005029222 ENSDLAG00005002022 ENSDLAG00005035044 #22 ENSDLAG00005002038 ENSDLAG00005002221 ENSDLAG00005003615 ENSDLAG00005004710 ENSDLAG00005004684 ENSDLAG00005004720 ENSDLAG00005004746 KIF20A (ENSDLAG00005004911) zgc:175280 (ENSDLAG00005004934) ENSDLAG00005005018 b4galt4 (ENSDLAG00005005129) ENSDLAG00005005146 ENSDLAG00005005170 ENSDLAG00005005190 ENSDLAG00005005203 Large yellow croaker MODERN SPECIES 493 SPTBN2 (ENSLCRG00005013723) LRCH2 (ENSLCRG00005013718) ENSLCRG00005013717 ENSLCRG00005013715 ENSLCRG00005013714 ENSLCRG00005013706 ENSLCRG00005013705 ENSLCRG00005013703 CAPN6 (ENSLCRG00005013681) PAK3 (ENSLCRG00005013626) mepcea (ENSLCRG00005013612) defbl2 (ENSLCRG00005013610) spag7 (ENSLCRG00005013605) chrdl2 (ENSLCRG00005013603) ENSLCRG00005013602 neu3.1 (ENSLCRG00005013601) #22 KCNAB3 (ENSLCRG00005013534) ephb4a (ENSLCRG00005013471) ENSLCRG00005013461 DLG4 (ENSLCRG00005007873) zbtb20 (ENSLCRG00005007820) slc25a5 (ENSLCRG00005007719) ENSLCRG00005007716 cdc23 (ENSLCRG00005007446) kif20a (ENSLCRG00005007414) zgc:175280 (ENSLCRG00005007409) CASR (ENSLCRG00005007402) b4galt4 (ENSLCRG00005007397) ENSLCRG00005007389 ENSLCRG00005007385 prdx4 (ENSLCRG00005007311) Perciformes ANCESTRAL SPECIES 22 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b Perciformes_a ANCESTRAL SPECIES 20 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b Pike perch MODERN SPECIES 37 klhl13 (ENSSLUG00000017118) WDR44 (ENSSLUG00000017175) zgc:163098 (ENSSLUG00000017713) LRCH2 (ENSSLUG00000017720) il13ra2 (ENSSLUG00000017730) ENSSLUG00000017733 ENSSLUG00000017735 CAPN6 (ENSSLUG00000017746) ENSSLUG00000017760 PAK3 (ENSSLUG00000017797) mepcea (ENSSLUG00000018178) defbl2 (ENSSLUG00000018186) spag7 (ENSSLUG00000018196) chrdl2 (ENSSLUG00000018204) ENSSLUG00000018214 neu3.1 (ENSSLUG00000018222) #22 KCNAB3 (ENSSLUG00000018267) ephb4a (ENSSLUG00000019372) DLG4 (ENSSLUG00000019553) zbtb20 (ENSSLUG00000022441) slc25a5 (ENSSLUG00000022443) ENSSLUG00000022451 cdc23 (ENSSLUG00000022463) kif20a (ENSSLUG00000022502) zgc:175280 (ENSSLUG00000022542) CASR (ENSSLUG00000022588) b4galt4 (ENSSLUG00000022606) ENSSLUG00000022613 ENSSLUG00000022622 ENSSLUG00000022628 ATP6V1A (ENSSLUG00000022635) Channel bull blenny MODERN SPECIES 5 ENSCGOG00000020298 ENSCGOG00000020300 klhl13 (ENSCGOG00000020313) WDR44 (ENSCGOG00000020380) zgc:163098 (ENSCGOG00000020627) LRCH2 (ENSCGOG00000020662) il13ra2 (ENSCGOG00000020670) ENSCGOG00000020672 ENSCGOG00000020674 CAPN6 (ENSCGOG00000020693) PAK3 (ENSCGOG00000021210) mepcea (ENSCGOG00000022358) defbl2 (ENSCGOG00000022360) spag7 (ENSCGOG00000022363) chrdl2 (ENSCGOG00000022365) neu3.1 (ENSCGOG00000022370) #22 KCNAB3 (ENSCGOG00000022404) ephb4a (ENSCGOG00000022924) DLG4 (ENSCGOG00000023411) zbtb20 (ENSCGOG00000023770) slc25a6 (ENSCGOG00000023776) ENSCGOG00000023810 cdc23 (ENSCGOG00000023850) kif20a (ENSCGOG00000023879) zgc:175280 (ENSCGOG00000023892) CASR (ENSCGOG00000023900) b4galt4 (ENSCGOG00000023906) ENSCGOG00000023908 ENSCGOG00000023909 ENSCGOG00000023910 ENSCGOG00000001603 Cottioidei ANCESTRAL SPECIES 10 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT01040000240539.a ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154622.a.b.m ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.a ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b ENSGT00940000156558.a.b Lumpfish MODERN SPECIES 5 ENSCLMG00005012294 klhl13 (ENSCLMG00005012299) WDR44 (ENSCLMG00005012565) zgc:163098 (ENSCLMG00005013287) ENSCLMG00005013288 ENSCLMG00005013290 il13ra2 (ENSCLMG00005013291) ENSCLMG00005013292 ENSCLMG00005013293 CAPN6 (ENSCLMG00005013295) PAK3 (ENSCLMG00005013311) mepcea (ENSCLMG00005013448) defbl2 (ENSCLMG00005013450) spag7 (ENSCLMG00005013454) chrdl2 (ENSCLMG00005013457) neu3.1 (ENSCLMG00005013459) #22 KCNAB3 (ENSCLMG00005013462) ephb4a (ENSCLMG00005013552) DLG4 (ENSCLMG00005014402) zbtb20 (ENSCLMG00005014405) slc25a6 (ENSCLMG00005014408) ENSCLMG00005014411 ENSCLMG00005014414 cdc23 (ENSCLMG00005014416) kif20a (ENSCLMG00005014562) zgc:175280 (ENSCLMG00005014696) CASR (ENSCLMG00005014698) b4galt4 (ENSCLMG00005014701) ENSCLMG00005014702 ENSCLMG00005014705 ENSCLMG00005014707 Stickleback MODERN SPECIES 7 ENSGACG00000020712 klhl13 (ENSGACG00000020711) WDR44 (ENSGACG00000020710) zgc:163098 (ENSGACG00000020709) LRCH2 (ENSGACG00000020708) il13ra2 (ENSGACG00000020707) ENSGACG00000020706 ENSGACG00000020705 ENSGACG00000020704 PAK3 (ENSGACG00000020703) ENSGACG00000020702 mepcea (ENSGACG00000020701) defbl2 (ENSGACG00000020700) spag7 (ENSGACG00000020699) chrdl2 (ENSGACG00000020698) neu3.1 (ENSGACG00000020697) #22 KCNAB3 (ENSGACG00000020696) ephb4a (ENSGACG00000020695) DLG4 (ENSGACG00000020694) zbtb20 (ENSGACG00000020693) ENSGACG00000020692 ENSGACG00000020691 cdc23 (ENSGACG00000020690) kif20a (ENSGACG00000020689) zgc:175280 (ENSGACG00000020688) CASR (ENSGACG00000020687) b4galt4 (ENSGACG00000020686) ENSGACG00000020685 ENSGACG00000020684 ENSGACG00000020683 ATP6V1A (ENSGACG00000020682) Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Carangaria ANCESTRAL SPECIES 16 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Carangaria_A ANCESTRAL SPECIES 8 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154622.a.b.m ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Seriola ANCESTRAL SPECIES 2 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00940000178035 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154622.a.b.m ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000154361.A ENSGT00950000182962.a.a.c ENSGT00550000074787.d.a.b Greater amberjack MODERN SPECIES 139 ENSSDUG00000010067 klhl13 (ENSSDUG00000010032) WDR44 (ENSSDUG00000009993) zgc:163098 (ENSSDUG00000009881) LRCH2 (ENSSDUG00000009829) il13ra2 (ENSSDUG00000009799) ENSSDUG00000009783 ENSSDUG00000009748 CAPN6 (ENSSDUG00000009382) PAK3 (ENSSDUG00000008331) mepcea (ENSSDUG00000008253) defbl2 (ENSSDUG00000008238) spag7 (ENSSDUG00000008225) chrdl2 (ENSSDUG00000008183) ENSSDUG00000008172 neu3.1 (ENSSDUG00000008169) #22 KCNAB3 (ENSSDUG00000007354) ephb4a (ENSSDUG00000007249) DLG4 (ENSSDUG00000007205) zbtb20 (ENSSDUG00000007188) ENSSDUG00000007174 ENSSDUG00000007156 cdc23 (ENSSDUG00000007107) kif20a (ENSSDUG00000007080) zgc:175280 (ENSSDUG00000007014) CASR (ENSSDUG00000006989) b4galt4 (ENSSDUG00000006975) ENSSDUG00000006959 ENSSDUG00000006944 ENSSDUG00000006920 ATP6V1A (ENSSDUG00000006881) Yellowtail amberjack MODERN SPECIES 3035 ENSSLDG00000020530 klhl13 (ENSSLDG00000020504) WDR44 (ENSSLDG00000020444) zgc:163098 (ENSSLDG00000020364) LRCH2 (ENSSLDG00000020331) il13ra2 (ENSSLDG00000020312) ENSSLDG00000020293 ENSSLDG00000020280 CAPN6 (ENSSLDG00000020262) PAK3 (ENSSLDG00000020143) mepcea (ENSSLDG00000020120) defbl2 (ENSSLDG00000020114) spag7 (ENSSLDG00000020103) chrdl2 (ENSSLDG00000020064) ENSSLDG00000020051 neu3.1 (ENSSLDG00000020043) #22 KCNAB3 (ENSSLDG00000020006) ephb4a (ENSSLDG00000019946) DLG4 (ENSSLDG00000019840) zbtb20 (ENSSLDG00000019822) ENSSLDG00000019804 ENSSLDG00000019788 cdc23 (ENSSLDG00000019752) kif20a (ENSSLDG00000019720) zgc:175280 (ENSSLDG00000019714) CASR (ENSSLDG00000019692) b4galt4 (ENSSLDG00000019681) ENSSLDG00000019672 gsx1 (ENSSLDG00000019661) ENSSLDG00000019626 ATP6V1A (ENSSLDG00000019592) Barramundi perch MODERN SPECIES 94 ENSLCAG00010005694 klhl13 (ENSLCAG00010005705) WDR44 (ENSLCAG00010005762) zgc:163098 (ENSLCAG00010006045) LRCH2 (ENSLCAG00010006112) il13ra2 (ENSLCAG00010006126) ENSLCAG00010006130 ENSLCAG00010006136 CAPN6 (ENSLCAG00010006146) PAK3 (ENSLCAG00010006195) mepcea (ENSLCAG00010006223) defbl2 (ENSLCAG00010006231) spag7 (ENSLCAG00010006239) chrdl2 (ENSLCAG00010006252) ENSLCAG00010006262 ENSLCAG00010006274 #22 KCNAB3 (ENSLCAG00010006338) ephb4a (ENSLCAG00010006501) DLG4 (ENSLCAG00010006576) zbtb20 (ENSLCAG00010006640) ENSLCAG00010006647 ENSLCAG00010006663 cdc23 (ENSLCAG00010006697) kif20a (ENSLCAG00010006765) zgc:175280 (ENSLCAG00010006873) CASR (ENSLCAG00010007265) b4galt4 (ENSLCAG00010007287) ENSLCAG00010007289 ENSLCAG00010007293 gsx1 (ENSLCAG00010007297) ENSLCAG00010007307 Pleuronectoidei ANCESTRAL SPECIES 23 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Turbot MODERN SPECIES 16 klhl13 (ENSSMAG00000013595) ENSSMAG00000013573 zgc:163098 (ENSSMAG00000013442) ENSSMAG00000013376 il13ra2 (ENSSMAG00000013307) ENSSMAG00000023137 ENSSMAG00000013241 ENSSMAG00000013231 ENSSMAG00000013188 ENSSMAG00000013182 ENSSMAG00000023875 ENSSMAG00000013168 ENSSMAG00000013155 ENSSMAG00000013136 ENSSMAG00000013080 ENSSMAG00000013071 #22 ENSSMAG00000013005 ENSSMAG00000012907 ENSSMAG00000012883 ENSSMAG00000012861 ENSSMAG00000012828 ENSSMAG00000012742 KIF20A (ENSSMAG00000012711) zgc:175280 (ENSSMAG00000012677) ENSSMAG00000012665 b4galt4 (ENSSMAG00000012659) ENSSMAG00000012641 ENSSMAG00000012630 ENSSMAG00000012555 ENSSMAG00000012526 ENSSMAG00000012496 Tongue sole MODERN SPECIES 10 ENSCSEG00000020107 KLHL9 (ENSCSEG00000020109) WDR44 (ENSCSEG00000020110) zgc:163098 (ENSCSEG00000020119) LRCH2 (ENSCSEG00000020135) il13ra2 (ENSCSEG00000020143) ENSCSEG00000020159 ENSCSEG00000020162 ENSCSEG00000020168 ENSCSEG00000020171 PAK3 (ENSCSEG00000020210) mepcea (ENSCSEG00000020220) ENSCSEG00000020221 spag7 (ENSCSEG00000020223) chrdl2 (ENSCSEG00000020231) neu3.1 (ENSCSEG00000020236) #22 ENSCSEG00000020240 KCNAB3 (ENSCSEG00000020245) ephb4a (ENSCSEG00000020306) DLG4 (ENSCSEG00000020314) zbtb20 (ENSCSEG00000020320) slc25a5 (ENSCSEG00000020323) ENSCSEG00000020329 cdc23 (ENSCSEG00000020338) kif20a (ENSCSEG00000020345) zgc:175280 (ENSCSEG00000020365) CASR (ENSCSEG00000020372) b4galt4 (ENSCSEG00000020375) ENSCSEG00000020377 ENSCSEG00000020379 gsx1 (ENSCSEG00000020381) Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Zig-zag eel MODERN SPECIES 5 ENSMAMG00000016936 klhl13 (ENSMAMG00000016944) ENSMAMG00000024463 ENSMAMG00000016965 zgc:163098 (ENSMAMG00000016977) ENSMAMG00000017030 il13ra2 (ENSMAMG00000017034) ENSMAMG00000027396 ENSMAMG00000017075 ENSMAMG00000017101 ENSMAMG00000017123 ENSMAMG00000017139 ENSMAMG00000017157 ENSMAMG00000017173 ENSMAMG00000017181 ENSMAMG00000017200 #22 ENSMAMG00000017208 ENSMAMG00000017219 ENSMAMG00000017275 ENSMAMG00000017438 ENSMAMG00000017456 ENSMAMG00000017476 ENSMAMG00000026984 ENSMAMG00000017506 KIF20A (ENSMAMG00000017548) zgc:175280 (ENSMAMG00000017561) ENSMAMG00000017580 b4galt4 (ENSMAMG00000017595) ENSMAMG00000026946 ENSMAMG00000017611 ENSMAMG00000017618 Anabantoidei ANCESTRAL SPECIES 12 ENSGT00940000170012 ENSGT00940000154359 ENSGT00940000157557 ENSGT00390000010687.a.b ENSGT00940000160039 ENSGT00940000159971 ENSGT00530000063484.b.a ENSGT00940000154895.a.b ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000153993.A.j ENSGT00650000094922 ENSGT00390000001520 ENSGT00940000166571 ENSGT00390000016048 ENSGT00950000182944.A.a #22 ENSGT00940000159306.b.a ENSGT00940000166305.B ENSGT00940000157956.o.b ENSGT00940000158617 ENSGT00940000154400 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000156931 ENSGT00940000164978.b.d ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458.e.b ENSGT00940000159458.e.a ENSGT00940000154361.A ENSGT00950000182962.a.a.c Climbing perch MODERN SPECIES 5 ENSATEG00000016493 klhl13 (ENSATEG00000016505) ENSATEG00000016545 zgc:163098 (ENSATEG00000016576) ENSATEG00000016650 il13ra2 (ENSATEG00000016707) ENSATEG00000016722 ENSATEG00000016743 ENSATEG00000016768 ENSATEG00000016796 ENSATEG00000016877 ENSATEG00000016886 ENSATEG00000016903 ENSATEG00000016913 ENSATEG00000029368 ENSATEG00000016928 #22 ENSATEG00000016942 ENSATEG00000017001 ENSATEG00000017065 ENSATEG00000017117 ENSATEG00000017131 ENSATEG00000017157 ENSATEG00000017213 KIF20A (ENSATEG00000017266) zgc:175280 (ENSATEG00000017297) ENSATEG00000017377 b4galt4 (ENSATEG00000017523) ENSATEG00000028248 ENSATEG00000017572 ENSATEG00000017583 ENSATEG00000017610 Siamese fighting fish MODERN SPECIES 5 klhl13 (ENSBSLG00000018997) WDR44 (ENSBSLG00000019566) zgc:163098 (ENSBSLG00000020380) LRCH2 (ENSBSLG00000020402) il13ra2 (ENSBSLG00000020439) ENSBSLG00000020460 ENSBSLG00000021119 ENSBSLG00000021355 PAK3 (ENSBSLG00000021794) mepcea (ENSBSLG00000022460) defbl2 (ENSBSLG00000022509) spag7 (ENSBSLG00000022541) chrdl2 (ENSBSLG00000022617) slc25a5 (ENSBSLG00000022720) ENSBSLG00000022755 neu3.1 (ENSBSLG00000022779) #22 KCNAB3 (ENSBSLG00000023395) ephb4a (ENSBSLG00000024621) DLG4 (ENSBSLG00000025854) zbtb20 (ENSBSLG00000025927) ENSBSLG00000025928 cdc23 (ENSBSLG00000025929) kif20a (ENSBSLG00000025932) zgc:175280 (ENSBSLG00000025933) CASR (ENSBSLG00000025934) b4galt4 (ENSBSLG00000025935) ENSBSLG00000025936 ENSBSLG00000025937 gsx1 (ENSBSLG00000025990) ENSBSLG00000026037 atp6v1aa (ENSBSLG00000026089) Pinecone sodierfish MODERN SPECIES 5 ENSMMDG00005002293 klhl13 (ENSMMDG00005002303) WDR44 (ENSMMDG00005002331) zgc:163098 (ENSMMDG00005003708) LRCH2 (ENSMMDG00005003715) ENSMMDG00005003723 il13ra2 (ENSMMDG00005003758) DCX (ENSMMDG00005004283) CAPN6 (ENSMMDG00005004303) PAK3 (ENSMMDG00005004368) mepcea (ENSMMDG00005004442) defbl2 (ENSMMDG00005004448) spag7 (ENSMMDG00005004457) chrdl2 (ENSMMDG00005004470) ENSMMDG00005004482 neu3.1 (ENSMMDG00005004494) #22 KCNAB3 (ENSMMDG00005004545) ephb4a (ENSMMDG00005006049) DLG4 (ENSMMDG00005007458) zbtb20 (ENSMMDG00005007464) slc25a5 (ENSMMDG00005007466) ENSMMDG00005007468 cdc23 (ENSMMDG00005007473) kif20a (ENSMMDG00005007483) zgc:175280 (ENSMMDG00005007489) CASR (ENSMMDG00005007564) b4galt4 (ENSMMDG00005007567) ENSMMDG00005007570 ENSMMDG00005007573 ENSMMDG00005007578 ATP6V1A (ENSMMDG00005007605) Cod DUPLICATION Cod MODERN SPECIES 20 ppp3ca (ENSGMOG00000013465) ENSGMOG00000028674 ENSGMOG00000019297 gng8 (ENSGMOG00000025665) ENSGMOG00000019311 nfrkb (ENSGMOG00000019315) ENSGMOG00000019332 ENSGMOG00000034278 DCX (ENSGMOG00000034349) ENSGMOG00000003178 PAK3 (ENSGMOG00000003145) ENSGMOG00000027027 ENSGMOG00000032958 ENSGMOG00000003072 ENSGMOG00000003045 ENSGMOG00000026696 #22 ENSGMOG00000002987 ENSGMOG00000027559 #22 ENSGMOG00000002905 ENSGMOG00000036964 ENSGMOG00000024094 ENSGMOG00000002813 ENSGMOG00000002777 KIF20A (ENSGMOG00000002724) zgc:175280 (ENSGMOG00000002684) ENSGMOG00000002672 b4galt4 (ENSGMOG00000002654) ENSGMOG00000033627 ENSGMOG00000023452 ENSGMOG00000002508 ENSGMOG00000002483 Cod MODERN SPECIES 20 zgc:153704 (ENSGMOG00000002433) ENSGMOG00000002452 ENSGMOG00000002483 ENSGMOG00000002508 ENSGMOG00000023452 ENSGMOG00000033627 b4galt4 (ENSGMOG00000002654) ENSGMOG00000002672 zgc:175280 (ENSGMOG00000002684) KIF20A (ENSGMOG00000002724) ENSGMOG00000002777 ENSGMOG00000002813 ENSGMOG00000024094 ENSGMOG00000036964 ENSGMOG00000002905 ENSGMOG00000027559 #22 ENSGMOG00000002987 ENSGMOG00000026696 #22 ENSGMOG00000003045 ENSGMOG00000003072 ENSGMOG00000032958 ENSGMOG00000027027 PAK3 (ENSGMOG00000003145) ENSGMOG00000003178 DCX (ENSGMOG00000034349) ENSGMOG00000034278 ENSGMOG00000019332 nfrkb (ENSGMOG00000019315) ENSGMOG00000019311 gng8 (ENSGMOG00000025665) ENSGMOG00000019297 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Otomorpha ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Clupeiformes ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 20 stk35 (ENSCHAG00000008009) ENSCHAG00000007996 ENSCHAG00000007985 ENSCHAG00000007477 ENSCHAG00000007454 scube3 (ENSCHAG00000001573) ENSCHAG00000000955 kcnd3 (ENSCHAG00000000783) ENSCHAG00000007961 ENSCHAG00000007954 cttnbp2nlb (ENSCHAG00000007944) capza1b (ENSCHAG00000007166) NEU3 (ENSCHAG00000007073) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000006992) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006783 #22 ENSCHAG00000006746 NEU3 (ENSCHAG00000006736) #22 wnt2bb (ENSCHAG00000006681) mov10b.1 (ENSCHAG00000005748) ENSCHAG00000005660 ENSCHAG00000005641 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005621 ENSCHAG00000005615 ENSCHAG00000005602 ENSCHAG00000005596 ENSCHAG00000005566 slc16a1b (ENSCHAG00000005537) Atlantic herring MODERN SPECIES 20 rimkla (ENSCHAG00000005458) zmynd12 (ENSCHAG00000005512) slc16a1b (ENSCHAG00000005537) ENSCHAG00000005566 ENSCHAG00000005596 ENSCHAG00000005602 ENSCHAG00000005615 ENSCHAG00000005621 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005641 ENSCHAG00000005660 mov10b.1 (ENSCHAG00000005748) wnt2bb (ENSCHAG00000006681) NEU3 (ENSCHAG00000006736) #22 ENSCHAG00000006746 ENSCHAG00000006783 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006992) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000007073) #22 capza1b (ENSCHAG00000007166) cttnbp2nlb (ENSCHAG00000007944) ENSCHAG00000007954 ENSCHAG00000007961 kcnd3 (ENSCHAG00000000783) ENSCHAG00000000955 scube3 (ENSCHAG00000001573) ENSCHAG00000007454 ENSCHAG00000007477 ENSCHAG00000007985 Atlantic herring MODERN SPECIES 20 ENSCHAG00000005602 ENSCHAG00000005615 ENSCHAG00000005621 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005641 ENSCHAG00000005660 mov10b.1 (ENSCHAG00000005748) wnt2bb (ENSCHAG00000006681) NEU3 (ENSCHAG00000006736) #22 ENSCHAG00000006746 ENSCHAG00000006783 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006992) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000007073) #22 capza1b (ENSCHAG00000007166) cttnbp2nlb (ENSCHAG00000007944) ENSCHAG00000007954 ENSCHAG00000007961 kcnd3 (ENSCHAG00000000783) ENSCHAG00000000955 scube3 (ENSCHAG00000001573) ENSCHAG00000007454 ENSCHAG00000007477 ENSCHAG00000007985 ENSCHAG00000007996 stk35 (ENSCHAG00000008009) pdyn (ENSCHAG00000008018) GMEB2 (ENSCHAG00000008027) RTEL1 (ENSCHAG00000008151) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 20 zmynd12 (ENSCHAG00000005512) slc16a1b (ENSCHAG00000005537) ENSCHAG00000005566 ENSCHAG00000005596 ENSCHAG00000005602 ENSCHAG00000005615 ENSCHAG00000005621 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005641 ENSCHAG00000005660 mov10b.1 (ENSCHAG00000005748) wnt2bb (ENSCHAG00000006681) NEU3 (ENSCHAG00000006736) #22 ENSCHAG00000006746 ENSCHAG00000006783 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006992) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000007073) #22 capza1b (ENSCHAG00000007166) cttnbp2nlb (ENSCHAG00000007944) ENSCHAG00000007954 ENSCHAG00000007961 kcnd3 (ENSCHAG00000000783) ENSCHAG00000000955 scube3 (ENSCHAG00000001573) ENSCHAG00000007454 ENSCHAG00000007477 ENSCHAG00000007985 ENSCHAG00000007996 Atlantic herring MODERN SPECIES 20 PRDM2 (ENSCHAG00000005397) FOXJ3 (ENSCHAG00000005424) rimkla (ENSCHAG00000005458) zmynd12 (ENSCHAG00000005512) slc16a1b (ENSCHAG00000005537) ENSCHAG00000005566 ENSCHAG00000005596 ENSCHAG00000005602 ENSCHAG00000005615 ENSCHAG00000005621 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005641 ENSCHAG00000005660 mov10b.1 (ENSCHAG00000005748) wnt2bb (ENSCHAG00000006681) NEU3 (ENSCHAG00000006736) #22 ENSCHAG00000006746 ENSCHAG00000006783 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006992) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000007073) #22 capza1b (ENSCHAG00000007166) cttnbp2nlb (ENSCHAG00000007944) ENSCHAG00000007954 ENSCHAG00000007961 kcnd3 (ENSCHAG00000000783) ENSCHAG00000000955 scube3 (ENSCHAG00000001573) ENSCHAG00000007454 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 20 pdyn (ENSCHAG00000008018) stk35 (ENSCHAG00000008009) ENSCHAG00000007996 ENSCHAG00000007985 ENSCHAG00000007477 ENSCHAG00000007454 scube3 (ENSCHAG00000001573) ENSCHAG00000000955 kcnd3 (ENSCHAG00000000783) ENSCHAG00000007961 ENSCHAG00000007954 cttnbp2nlb (ENSCHAG00000007944) capza1b (ENSCHAG00000007166) NEU3 (ENSCHAG00000007073) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000006992) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006783 #22 ENSCHAG00000006746 NEU3 (ENSCHAG00000006736) #22 wnt2bb (ENSCHAG00000006681) mov10b.1 (ENSCHAG00000005748) ENSCHAG00000005660 ENSCHAG00000005641 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005621 ENSCHAG00000005615 ENSCHAG00000005602 ENSCHAG00000005596 ENSCHAG00000005566 Atlantic herring MODERN SPECIES 4 atp6v1ba (ENSCHAG00000023063) shtn1 (ENSCHAG00000023623) eno4 (ENSCHAG00000023646) ENSCHAG00000023653 hspa12a (ENSCHAG00000023660) PNLIPRP2 (ENSCHAG00000023673) pitx3 (ENSCHAG00000023844) GBF1 (ENSCHAG00000023858) ENSCHAG00000024052 macroh2a2 (ENSCHAG00000024058) ENSCHAG00000024065 hells (ENSCHAG00000024099) atl2 (ENSCHAG00000024497) galm (ENSCHAG00000024799) DHX57 (ENSCHAG00000024807) NEU3 (ENSCHAG00000024887) #22 ENSCHAG00000024889 ENSCHAG00000024894 ENSCHAG00000024901 fgfr2 (ENSCHAG00000001587) ATE1 (ENSCHAG00000008664) lrrfip2 (ENSCHAG00000008980) mlh1 (ENSCHAG00000009405) ENSCHAG00000009520 ENSCHAG00000009536 HERC4 (ENSCHAG00000009628) cox5b2 (ENSCHAG00000009837) dnajc12 (ENSCHAG00000009852) eif3s6ip (ENSCHAG00000009927) cdh23 (ENSCHAG00000010209) vsir (ENSCHAG00000013637) Atlantic herring MODERN SPECIES 20 GMEB2 (ENSCHAG00000008027) pdyn (ENSCHAG00000008018) stk35 (ENSCHAG00000008009) ENSCHAG00000007996 ENSCHAG00000007985 ENSCHAG00000007477 ENSCHAG00000007454 scube3 (ENSCHAG00000001573) ENSCHAG00000000955 kcnd3 (ENSCHAG00000000783) ENSCHAG00000007961 ENSCHAG00000007954 cttnbp2nlb (ENSCHAG00000007944) capza1b (ENSCHAG00000007166) NEU3 (ENSCHAG00000007073) #22 NEU3 (ENSCHAG00000007041) #22 NEU3 (ENSCHAG00000006992) #22 ENSCHAG00000006866 #22 NEU3 (ENSCHAG00000006769) #22 ENSCHAG00000006783 #22 ENSCHAG00000006746 NEU3 (ENSCHAG00000006736) #22 wnt2bb (ENSCHAG00000006681) mov10b.1 (ENSCHAG00000005748) ENSCHAG00000005660 ENSCHAG00000005641 TAFA3 (ENSCHAG00000005632) ENSCHAG00000005621 ENSCHAG00000005615 ENSCHAG00000005602 ENSCHAG00000005596 Atlantic herring MODERN SPECIES 4 DLK2 (ENSCHAG00000008913) dnph1 (ENSCHAG00000009007) mea1 (ENSCHAG00000009013) ppp2r5d (ENSCHAG00000009027) ENSCHAG00000009156 PPP2R5D (ENSCHAG00000009221) ENSCHAG00000009343 CUL7 (ENSCHAG00000009408) SYNDIG1 (ENSCHAG00000011053) ENSCHAG00000011088 apmap (ENSCHAG00000011098) ENSCHAG00000011129 TMEM26 (ENSCHAG00000011144) ENSCHAG00000011149 ENSCHAG00000011222 NEU3 (ENSCHAG00000011227) #22 ENSCHAG00000011234 ENSCHAG00000011264 ENSCHAG00000011300 ENSCHAG00000011317 ENSCHAG00000011338 ENSCHAG00000011356 ENSCHAG00000011366 ide (ENSCHAG00000011376) marchf5 (ENSCHAG00000011612) cpeb3 (ENSCHAG00000011779) ENSCHAG00000011703 BTAF1 (ENSCHAG00000011990) BTAF1 (ENSCHAG00000016105) CCNJ (ENSCHAG00000016690) ENSCHAG00000016699 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000182944.A.b #22 Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000182944.A.b.c #22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000182944.A.b.c #22 Eupercaria ANCESTRAL SPECIES ENSGT00950000182944.A.b.c #22 Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 2727 NEU3 (ENSLBEG00000011833) #22 NEU3 (ENSLBEG00000011852) #22 ENSLBEG00000011868 Ballan wrasse MODERN SPECIES 287 NFIX (ENSLBEG00000021105) rnf11a (ENSLBEG00000021032) HMOX1 (ENSLBEG00000021015) ENSLBEG00000020993 ENSLBEG00000020977 NEU3 (ENSLBEG00000020961) #22 NEU3 (ENSLBEG00000020949) #22 NEU3 (ENSLBEG00000020937) #22 NEU3 (ENSLBEG00000020919) #22 ENSLBEG00000020905 ENSLBEG00000020889 fdx2 (ENSLBEG00000020878) s1pr5b (ENSLBEG00000020859) keap1b (ENSLBEG00000020837) ENSLBEG00000020827 CDKN2D (ENSLBEG00000020818) ap1m2 (ENSLBEG00000020783) ENSLBEG00000020752 SMARCA4 (ENSLBEG00000020655) atg4da (ENSLBEG00000020609) MAST1 (ENSLBEG00000020537) rnaseh2a (ENSLBEG00000020494) ENSLBEG00000020466 Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 2727 NEU3 (ENSLBEG00000011833) #22 NEU3 (ENSLBEG00000011852) #22 ENSLBEG00000011868 Ballan wrasse MODERN SPECIES 287 NFIX (ENSLBEG00000021105) rnf11a (ENSLBEG00000021032) HMOX1 (ENSLBEG00000021015) ENSLBEG00000020993 ENSLBEG00000020977 NEU3 (ENSLBEG00000020961) #22 NEU3 (ENSLBEG00000020949) #22 NEU3 (ENSLBEG00000020937) #22 NEU3 (ENSLBEG00000020919) #22 ENSLBEG00000020905 ENSLBEG00000020889 fdx2 (ENSLBEG00000020878) s1pr5b (ENSLBEG00000020859) keap1b (ENSLBEG00000020837) ENSLBEG00000020827 CDKN2D (ENSLBEG00000020818) ap1m2 (ENSLBEG00000020783) ENSLBEG00000020752 SMARCA4 (ENSLBEG00000020655) atg4da (ENSLBEG00000020609) MAST1 (ENSLBEG00000020537) rnaseh2a (ENSLBEG00000020494) ENSLBEG00000020466 ENSLBEG00000020228 Ballan wrasse MODERN SPECIES 287 NFIX (ENSLBEG00000021105) rnf11a (ENSLBEG00000021032) HMOX1 (ENSLBEG00000021015) ENSLBEG00000020993 ENSLBEG00000020977 NEU3 (ENSLBEG00000020961) #22 NEU3 (ENSLBEG00000020949) #22 NEU3 (ENSLBEG00000020937) #22 NEU3 (ENSLBEG00000020919) #22 ENSLBEG00000020905 ENSLBEG00000020889 fdx2 (ENSLBEG00000020878) s1pr5b (ENSLBEG00000020859) keap1b (ENSLBEG00000020837) ENSLBEG00000020827 CDKN2D (ENSLBEG00000020818) ap1m2 (ENSLBEG00000020783) ENSLBEG00000020752 SMARCA4 (ENSLBEG00000020655) atg4da (ENSLBEG00000020609) MAST1 (ENSLBEG00000020537) Ballan wrasse MODERN SPECIES 287 NFIX (ENSLBEG00000021105) rnf11a (ENSLBEG00000021032) HMOX1 (ENSLBEG00000021015) ENSLBEG00000020993 ENSLBEG00000020977 NEU3 (ENSLBEG00000020961) #22 NEU3 (ENSLBEG00000020949) #22 NEU3 (ENSLBEG00000020937) #22 NEU3 (ENSLBEG00000020919) #22 ENSLBEG00000020905 ENSLBEG00000020889 fdx2 (ENSLBEG00000020878) s1pr5b (ENSLBEG00000020859) keap1b (ENSLBEG00000020837) ENSLBEG00000020827 CDKN2D (ENSLBEG00000020818) ap1m2 (ENSLBEG00000020783) ENSLBEG00000020752 SMARCA4 (ENSLBEG00000020655) atg4da (ENSLBEG00000020609) MAST1 (ENSLBEG00000020537) rnaseh2a (ENSLBEG00000020494) Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Perciformes ANCESTRAL SPECIES 2 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Perciformes_a ANCESTRAL SPECIES ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Channel bull blenny MODERN SPECIES ENSCGOG00000021740 ENSCGOG00000021738 ENSCGOG00000021737 ENSCGOG00000021735 elof1 (ENSCGOG00000021727) pld6 (ENSCGOG00000021726) ENSCGOG00000021724 tspan34 (ENSCGOG00000021722) dand5 (ENSCGOG00000021720) NFIX (ENSCGOG00000021693) rnf11a (ENSCGOG00000021688) HMOX1 (ENSCGOG00000021690) ENSCGOG00000021685 ENSCGOG00000021681 ENSCGOG00000021679 NEU3 (ENSCGOG00000021678) #22 ENSCGOG00000021677 ENSCGOG00000021676 fdx2 (ENSCGOG00000021674) s1pr5b (ENSCGOG00000021673) keap1b (ENSCGOG00000021671) ENSCGOG00000021669 CDKN2D (ENSCGOG00000021666) ap1m2 (ENSCGOG00000021610) ENSCGOG00000021526 SMARCA4 (ENSCGOG00000020723) atg4da (ENSCGOG00000020669) MAST1 (ENSCGOG00000020651) rnaseh2a (ENSCGOG00000020614) SOX10 (ENSCGOG00000020612) ENSCGOG00000020610 Pike perch MODERN SPECIES 69 ENSSLUG00000024805 ENSSLUG00000024802 ENSSLUG00000024800 ENSSLUG00000024798 PLPPR2 (ENSSLUG00000024794) elof1 (ENSSLUG00000024791) pld6 (ENSSLUG00000024790) RAB3D (ENSSLUG00000024787) tspan34 (ENSSLUG00000024786) dand5 (ENSSLUG00000024784) NFIX (ENSSLUG00000024749) rnf11a (ENSSLUG00000024737) HMOX1 (ENSSLUG00000024735) ENSSLUG00000024733 ENSSLUG00000024731 NEU3 (ENSSLUG00000024708) #22 ENSSLUG00000024698 ENSSLUG00000024697 fdx2 (ENSSLUG00000024696) s1pr5b (ENSSLUG00000024694) keap1b (ENSSLUG00000024692) ENSSLUG00000024687 CDKN2D (ENSSLUG00000024686) ap1m2 (ENSSLUG00000024580) ENSSLUG00000023970 SMARCA4 (ENSSLUG00000016006) atg4da (ENSSLUG00000015299) MAST1 (ENSSLUG00000015278) ENSSLUG00000015266 rnaseh2a (ENSSLUG00000015229) SOX10 (ENSSLUG00000015215) Eupecaria_C DUPLICATION Eupecaria_C ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.c #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.c #22 Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 481 ENSLCRG00005002391 elof1 (ENSLCRG00005002398) ENSLCRG00005002427 ENSLCRG00005002433 ENSLCRG00005002436 tspan34 (ENSLCRG00005002441) dand5 (ENSLCRG00005002448) NFIX (ENSLCRG00005002487) rnf11a (ENSLCRG00005002528) HMOX1 (ENSLCRG00005002532) ENSLCRG00005002538 ENSLCRG00005002542 ENSLCRG00005002548 NEU3 (ENSLCRG00005002553) #22 ENSLCRG00005002559 #22 NEU3 (ENSLCRG00005002612) #22 ENSLCRG00005002614 ENSLCRG00005002617 fdx2 (ENSLCRG00005002620) s1pr5b (ENSLCRG00005002624) keap1 (ENSLCRG00005002628) ENSLCRG00005002636 CDKN2D (ENSLCRG00005002639) ap1m2 (ENSLCRG00005002656) ENSLCRG00005002982 SMARCA4 (ENSLCRG00005007894) atg4da (ENSLCRG00005008780) MAST1 (ENSLCRG00005008792) rnaseh2a (ENSLCRG00005009186) SOX10 (ENSLCRG00005009213) KCNJ4 (ENSLCRG00005009214) Large yellow croaker MODERN SPECIES 481 ENSLCRG00005002380 ENSLCRG00005002391 elof1 (ENSLCRG00005002398) ENSLCRG00005002427 ENSLCRG00005002433 ENSLCRG00005002436 tspan34 (ENSLCRG00005002441) dand5 (ENSLCRG00005002448) NFIX (ENSLCRG00005002487) rnf11a (ENSLCRG00005002528) HMOX1 (ENSLCRG00005002532) ENSLCRG00005002538 ENSLCRG00005002542 ENSLCRG00005002548 NEU3 (ENSLCRG00005002553) #22 ENSLCRG00005002559 #22 NEU3 (ENSLCRG00005002612) #22 ENSLCRG00005002614 ENSLCRG00005002617 fdx2 (ENSLCRG00005002620) s1pr5b (ENSLCRG00005002624) keap1 (ENSLCRG00005002628) ENSLCRG00005002636 CDKN2D (ENSLCRG00005002639) ap1m2 (ENSLCRG00005002656) ENSLCRG00005002982 SMARCA4 (ENSLCRG00005007894) atg4da (ENSLCRG00005008780) MAST1 (ENSLCRG00005008792) rnaseh2a (ENSLCRG00005009186) SOX10 (ENSLCRG00005009213) European seabass MODERN SPECIES 13 kcnv2b (ENSDLAG00005010981) atp5meb (ENSDLAG00005030491) ENSDLAG00005010968 ENSDLAG00005010869 tnksb (ENSDLAG00005009305) ENSDLAG00005009263 ENSDLAG00005033234 ENSDLAG00005031209 ENSDLAG00005021307 ENSDLAG00005004913 ENSDLAG00005002465 ENSDLAG00005020194 ENSDLAG00005011240 ENSDLAG00005012613 ENSDLAG00005006453 ENSDLAG00005026736 #22 ENSDLAG00005034226 ENSDLAG00005031726 ENSDLAG00005026786 ENSDLAG00005031494 ENSDLAG00005030020 ENSDLAG00005015725 ENSDLAG00005031691 ENSDLAG00005035060 ENSDLAG00005031343 ENSDLAG00005031016 ALKBH2 (ENSDLAG00005030401) UNG (ENSDLAG00005033372) USP30 (ENSDLAG00005033342) SVOP (ENSDLAG00005034860) DAO (ENSDLAG00005034828) Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c.d #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c.d #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b European seabass MODERN SPECIES 20 ENSDLAG00005035100 ENSDLAG00005034675 ENSDLAG00005007949 ENSDLAG00005007954 ENSDLAG00005033110 ENSDLAG00005029455 ENSDLAG00005007991 ENSDLAG00005008025 ENSDLAG00005021936 ENSDLAG00005008056 ENSDLAG00005030170 ENSDLAG00005008075 ENSDLAG00005031386 ENSDLAG00005008204 ENSDLAG00005032780 ENSDLAG00005008225 #22 ENSDLAG00005008231 #22 ENSDLAG00005008241 ENSDLAG00005029476 s1pr5b (ENSDLAG00005035010) keap1b (ENSDLAG00005008271) ENSDLAG00005008311 ap1m2 (ENSDLAG00005008335) ENSDLAG00005008870 ENSDLAG00005009156 ENSDLAG00005009447 ENSDLAG00005009485 ENSDLAG00005010262 ENSDLAG00005010273 ENSDLAG00005010276 ENSDLAG00005010277 Large yellow croaker MODERN SPECIES 481 ENSLCRG00005016988 ENSLCRG00005002380 ENSLCRG00005002391 elof1 (ENSLCRG00005002398) ENSLCRG00005002427 ENSLCRG00005002433 ENSLCRG00005002436 tspan34 (ENSLCRG00005002441) dand5 (ENSLCRG00005002448) NFIX (ENSLCRG00005002487) rnf11a (ENSLCRG00005002528) HMOX1 (ENSLCRG00005002532) ENSLCRG00005002538 ENSLCRG00005002542 ENSLCRG00005002548 NEU3 (ENSLCRG00005002553) #22 ENSLCRG00005002559 #22 NEU3 (ENSLCRG00005002612) #22 ENSLCRG00005002614 ENSLCRG00005002617 fdx2 (ENSLCRG00005002620) s1pr5b (ENSLCRG00005002624) keap1 (ENSLCRG00005002628) ENSLCRG00005002636 CDKN2D (ENSLCRG00005002639) ap1m2 (ENSLCRG00005002656) ENSLCRG00005002982 SMARCA4 (ENSLCRG00005007894) atg4da (ENSLCRG00005008780) MAST1 (ENSLCRG00005008792) rnaseh2a (ENSLCRG00005009186) Gilthead seabream MODERN SPECIES ENSSAUG00010003888 ENSSAUG00010003885 ENSSAUG00010003882 palm3 (ENSSAUG00010003874) ENSSAUG00010003869 elof1 (ENSSAUG00010003841) pld6 (ENSSAUG00010003834) ENSSAUG00010003832 tspan34 (ENSSAUG00010003831) dand5 (ENSSAUG00010003827) NFIX (ENSSAUG00010003122) rnf11a (ENSSAUG00010003075) HMOX1 (ENSSAUG00010003067) ENSSAUG00010003063 ENSSAUG00010003057 NEU3 (ENSSAUG00010003053) #22 ENSSAUG00010003043 fdx2 (ENSSAUG00010003033) s1pr5b (ENSSAUG00010003030) keap1b (ENSSAUG00010003018) ENSSAUG00010003007 CDKN2D (ENSSAUG00010002999) ap1m2 (ENSSAUG00010025874) ENSSAUG00010025464 SMARCA4 (ENSSAUG00010025426) atg4da (ENSSAUG00010025418) MAST1 (ENSSAUG00010025373) rnaseh2a (ENSSAUG00010025366) SOX10 (ENSSAUG00010025364) KCNJ4 (ENSSAUG00010025363) ENSSAUG00010025362 Ovalentaria DUPLICATION Ovalentaria ANCESTRAL SPECIES 16 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000180156 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00940000180245 ENSGT00940000165322 ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a Atherinomorphae DUPLICATION Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00940000180245 ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b ENSGT00500000044909 ENSGT00950000183174.A Cyprinodontoidei ANCESTRAL SPECIES 36 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d Poeciliinae ANCESTRAL SPECIES 12 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165894.a ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00550000074856.c.a ENSGT01030000235069 ENSGT00550000074798.a.a ENSGT00940000155771.c ENSGT00730000110989.c.a ENSGT00390000012355.A.a.a.b ENSGT00950000182869.e.b.g.a.g ENSGT00950000182888.b ENSGT00500000044909 Poecilia ANCESTRAL SPECIES 12 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165894.a ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00550000074856.c.a ENSGT00550000074798.a.a ENSGT00940000155771.c ENSGT00730000110989.c.a ENSGT00390000012355.A.a.a.b ENSGT00950000182869.e.b.g.a.g ENSGT00950000182888.b NAME_6 DUPLICATION NAME_6 ANCESTRAL SPECIES 108 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165894.a ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a.a #22 ENSGT00950000182944.A.b.c.e.a.b #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.e.b #22 ENSGT00950000183116.b.a.a.b.a.b.n.a.a.b ENSGT00550000074856.c.a ENSGT00550000074798.a.a ENSGT00940000155771.c ENSGT00730000110989.c.a Amazon molly MODERN SPECIES 541 ppiaa (ENSPFOG00000018678) ZMIZ2 (ENSPFOG00000024097) ZMIZ2 (ENSPFOG00000018681) ENSPFOG00000018694 OGDH (ENSPFOG00000018716) CAMK2B (ENSPFOG00000018758) nudcd3 (ENSPFOG00000018763) mrps24 (ENSPFOG00000018768) ENSPFOG00000023688 gnsb (ENSPFOG00000018781) polm (ENSPFOG00000018795) ved (ENSPFOG00000024366) PURB (ENSPFOG00000018825) ENSPFOG00000018826 ENSPFOG00000018829 ENSPFOG00000018845 #22 ENSPFOG00000018848 #22 CNNM4 (ENSPFOG00000018852) ENSPFOG00000018869 ENSPFOG00000024166 UBE2L5 (ENSPFOG00000018894) ckmt2a (ENSPFOG00000018900) RASGRF2 (ENSPFOG00000023910) Sailfin molly MODERN SPECIES 273 ddx56 (ENSPLAG00000019208) DUSP26 (ENSPLAG00000019165) ppiaa (ENSPLAG00000019152) ZMIZ2 (ENSPLAG00000019121) ENSPLAG00000018937 OGDH (ENSPLAG00000018929) CAMK2B (ENSPLAG00000018826) nudcd3 (ENSPLAG00000016981) mrps24 (ENSPLAG00000016975) gnsb (ENSPLAG00000000789) polm (ENSPLAG00000016963) ved (ENSPLAG00000016631) PURB (ENSPLAG00000016620) ENSPLAG00000016613 ENSPLAG00000016599 ENSPLAG00000016542 #22 NAME_6 ANCESTRAL SPECIES 108 ENSGT00940000158107.a.a ENSGT00940000165894.a ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a.a #22 ENSGT00950000182944.A.b.c.e.a.b #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.e.b #22 ENSGT00950000183116.b.a.a.b.a.b.n.a.a.b ENSGT00550000074856.c.a ENSGT00550000074798.a.a ENSGT00940000155771.c ENSGT00730000110989.c.a ENSGT00390000012355.A.a.a.b Amazon molly MODERN SPECIES 541 ZMIZ2 (ENSPFOG00000024097) ZMIZ2 (ENSPFOG00000018681) ENSPFOG00000018694 OGDH (ENSPFOG00000018716) CAMK2B (ENSPFOG00000018758) nudcd3 (ENSPFOG00000018763) mrps24 (ENSPFOG00000018768) ENSPFOG00000023688 gnsb (ENSPFOG00000018781) polm (ENSPFOG00000018795) ved (ENSPFOG00000024366) PURB (ENSPFOG00000018825) ENSPFOG00000018826 ENSPFOG00000018829 ENSPFOG00000018845 #22 ENSPFOG00000018848 #22 CNNM4 (ENSPFOG00000018852) ENSPFOG00000018869 ENSPFOG00000024166 UBE2L5 (ENSPFOG00000018894) ckmt2a (ENSPFOG00000018900) RASGRF2 (ENSPFOG00000023910) Sailfin molly MODERN SPECIES 1929 ENSPLAG00000011782 #22 CNNM4 (ENSPLAG00000011761) ENSPLAG00000011618 ENSPLAG00000011591 UBE2L5 (ENSPLAG00000011582) ckmt2a (ENSPLAG00000011572) RASGRF2 (ENSPLAG00000011541) Guppy MODERN SPECIES 442 ddx56 (ENSPREG00000015142) DUSP26 (ENSPREG00000015207) ppiaa (ENSPREG00000015219) ZMIZ2 (ENSPREG00000015239) ENSPREG00000015269 OGDH (ENSPREG00000015295) CAMK2B (ENSPREG00000015332) nudcd3 (ENSPREG00000015381) mrps24 (ENSPREG00000015401) gnsb (ENSPREG00000015426) polm (ENSPREG00000015468) ved (ENSPREG00000015482) PURB (ENSPREG00000015491) ENSPREG00000015501 ENSPREG00000015517 NEU3 (ENSPREG00000015543) #22 CNNM4 (ENSPREG00000015553) ENSPREG00000015579 ENSPREG00000015611 UBE2L5 (ENSPREG00000015634) ckmt2a (ENSPREG00000015649) RASGRF2 (ENSPREG00000015734) ENSPREG00000015971 #22 ENSPREG00000016017 #22 ENSPREG00000016047 #22 SLC25A1 (ENSPREG00000016126) pi4kaa (ENSPREG00000016173) MARVELD2 (ENSPREG00000016287) oclna (ENSPREG00000016314) ENSPREG00000016333 ENSPREG00000016338 Platyfish MODERN SPECIES 22 aebp1a (ENSXMAG00000018732) ddx56 (ENSXMAG00000018749) DUSP26 (ENSXMAG00000018766) ENSXMAG00000018774 ENSXMAG00000018813 ENSXMAG00000018821 CAMK2B (ENSXMAG00000025444) nudcd3 (ENSXMAG00000018966) mrps24 (ENSXMAG00000018973) gnsb (ENSXMAG00000018977) polm (ENSXMAG00000001138) ved (ENSXMAG00000001165) PURB (ENSXMAG00000020285) ENSXMAG00000001168 ENSXMAG00000001176 NEU3 (ENSXMAG00000001188) #22 CNNM4 (ENSXMAG00000001195) ENSXMAG00000001208 ENSXMAG00000021071 UBE2L5 (ENSXMAG00000001950) ckmt2a (ENSXMAG00000001254) RASGRF2 (ENSXMAG00000001285) ENSXMAG00000026627 #22 ENSXMAG00000029262 #22 ENSXMAG00000022816 #22 ENSXMAG00000023874 #22 ENSXMAG00000021503 NEU3 (ENSXMAG00000024524) #22 SLC25A1 (ENSXMAG00000004598) ENSXMAG00000028527 pi4kaa (ENSXMAG00000004531) NAME_4 ANCESTRAL SPECIES 238 ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000156481.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d Sheepshead minnow MODERN SPECIES 951 ENSCVAG00000004648 mrps24 (ENSCVAG00000004623) gnsb (ENSCVAG00000004612) ENSCVAG00000004593 ved (ENSCVAG00000004583) PURB (ENSCVAG00000004571) ENSCVAG00000004566 ENSCVAG00000004554 NEU3 (ENSCVAG00000004528) #22 CNNM4 (ENSCVAG00000004523) Aplocheiloidei ANCESTRAL SPECIES 73 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a Mangrove rivulus MODERN SPECIES 171 ddx56 (ENSKMAG00000016611) DUSP26 (ENSKMAG00000016585) ppiab (ENSKMAG00000016574) ZMIZ2 (ENSKMAG00000016518) ENSKMAG00000016483 OGDH (ENSKMAG00000016415) CAMK2B (ENSKMAG00000016336) nudcd3 (ENSKMAG00000016295) mrps24 (ENSKMAG00000016276) gnsb (ENSKMAG00000016225) polm (ENSKMAG00000016194) ved (ENSKMAG00000016182) PURB (ENSKMAG00000016170) ENSKMAG00000016156 ENSKMAG00000016143 NEU3 (ENSKMAG00000016130) #22 CNNM4 (ENSKMAG00000016094) ENSKMAG00000016058 ENSKMAG00000016036 ENSKMAG00000016019 ckmt2a (ENSKMAG00000015989) RASGRF2 (ENSKMAG00000015947) Oryzias ANCESTRAL SPECIES 9 ENSGT00940000155411.d ENSGT00940000157492.a ENSGT00940000157995 ENSGT00940000159267 ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00940000180245 ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b Oryzias_a ANCESTRAL SPECIES 12 ENSGT00940000155411.d ENSGT00940000157492.a ENSGT00940000157995 ENSGT00940000159267 ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00940000180245 ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b Japanese Medaka HdrR MODERN SPECIES 3 ENSORLG00000001039 ENSORLG00000025995 cetn3 (ENSORLG00000001027) HAPLN1 (ENSORLG00000001020) ENSORLG00000000992 ENSORLG00000000979 ENSORLG00000000900 nudcd3 (ENSORLG00000000883) mrps24 (ENSORLG00000000867) gnsb (ENSORLG00000000857) polm (ENSORLG00000000840) ved (ENSORLG00000023823) PURB (ENSORLG00000000837) ENSORLG00000024863 CNNM3 (ENSORLG00000000826) neu3b (ENSORLG00000000809) #22 ENSORLG00000000803 ENSORLG00000000795 ENSORLG00000000778 UBE2L5 (ENSORLG00000000771) ENSORLG00000026985 ckmt2a (ENSORLG00000000769) ENSORLG00000000753 ENSORLG00000000675 oclna (ENSORLG00000000668) ENSORLG00000000652 ENSORLG00000023950 ENSORLG00000025597 ENSORLG00000027140 SLC25A1 (ENSORLG00000000564) ENSORLG00000000548 Chinese medaka MODERN SPECIES 1218 cetn3 (ENSOSIG00000016178) HAPLN1 (ENSOSIG00000016179) ENSOSIG00000016181 CAMK2B (ENSOSIG00000016468) nudcd3 (ENSOSIG00000022147) mrps24 (ENSOSIG00000022149) ENSOSIG00000022151 CNNM3 (ENSOSIG00000022152) NEU3 (ENSOSIG00000022153) #22 ENSOSIG00000022155 tor4aa (ENSOSIG00000022157) ENSOSIG00000022160 SLC25A1 (ENSOSIG00000022165) MARVELD2 (ENSOSIG00000022193) ANKRD34B (ENSOSIG00000022197) RASGRF2 (ENSOSIG00000022236) ckmt2a (ENSOSIG00000022294) UBE2L5 (ENSOSIG00000022304) Oryzias_b ANCESTRAL SPECIES 4 ENSGT00940000155411.d ENSGT00940000157492.a ENSGT00940000157995 ENSGT00940000159267 ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00940000180245 ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b Indian medaka MODERN SPECIES 30 ENSOMEG00000022855 ENSOMEG00000022880 cetn3 (ENSOMEG00000022901) HAPLN1 (ENSOMEG00000022929) ENSOMEG00000022943 OGDH (ENSOMEG00000022964) CAMK2B (ENSOMEG00000022992) nudcd3 (ENSOMEG00000023012) mrps24 (ENSOMEG00000023018) gnsb (ENSOMEG00000023040) polm (ENSOMEG00000000622) ved (ENSOMEG00000023061) PURB (ENSOMEG00000023076) ENSOMEG00000023083 CNNM3 (ENSOMEG00000023101) ENSOMEG00000023108 #22 CNNM4 (ENSOMEG00000023126) ENSOMEG00000023165 ENSOMEG00000023202 UBE2L5 (ENSOMEG00000023226) ENSOMEG00000023229 ckmt2a (ENSOMEG00000023240) RASGRF2 (ENSOMEG00000023256) ENSOMEG00000000814 oclna (ENSOMEG00000023280) MARVELD2 (ENSOMEG00000000815) ENSOMEG00000023307 ENSOMEG00000023313 ENSOMEG00000023317 SLC25A1 (ENSOMEG00000023335) VDAC3 (ENSOMEG00000023354) Javanese ricefish MODERN SPECIES 3 ENSOJAG00000015538 ENSOJAG00000015981 ENSOJAG00000016196 mef2ca (ENSOJAG00000016218) cetn3 (ENSOJAG00000016238) HAPLN1 (ENSOJAG00000016279) CAMK2B (ENSOJAG00000016481) nudcd3 (ENSOJAG00000018366) mrps24 (ENSOJAG00000018463) gnsb (ENSOJAG00000018474) polm (ENSOJAG00000018627) ved (ENSOJAG00000018684) PURB (ENSOJAG00000018690) ENSOJAG00000018697 ENSOJAG00000001664 NEU3 (ENSOJAG00000001701) #22 CNNM4 (ENSOJAG00000001764) ENSOJAG00000001854 UBE2L5 (ENSOJAG00000002232) ckmt2a (ENSOJAG00000002248) RASGRF2 (ENSOJAG00000002297) ENSOJAG00000002439 ENSOJAG00000002450 ENSOJAG00000002454 oclna (ENSOJAG00000002475) ENSOJAG00000002491 MARVELD2 (ENSOJAG00000002502) SLC25A1 (ENSOJAG00000003504) zgc:56235 (ENSOJAG00000003581) tor4aa (ENSOJAG00000004020) brap (ENSOJAG00000004054) Atherinomorphae ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 Poeciliinae ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 Poecilia ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 NAME_6 ANCESTRAL SPECIES 108 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e.a.a #22 ENSGT00950000182944.A.b.c.e.a.b #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.e.b #22 ENSGT00950000183116.b.a.a.b.a.b.n.a.a.b ENSGT00550000074856.c.a ENSGT00550000074798.a.a ENSGT00940000155771.c ENSGT00730000110989.c.a ENSGT00390000012355.A.a.a.b ENSGT00950000182869.e.b.g.a.g ENSGT00950000182888.b ENSGT00500000044909 ENSGT00950000183174.A ENSGT00940000155101.e ENSGT00580000081898.b ENSGT00940000165179.a ENSGT00940000157468.b.f ENSGT00940000153876.B Amazon molly DUPLICATION Amazon molly MODERN SPECIES 1265 NEU3 (ENSPFOG00000018812) #22 Amazon molly MODERN SPECIES 686 RASGRF2 (ENSPFOG00000024630) ENSPFOG00000007196 #22 NEU3 (ENSPFOG00000007202) #22 ENSPFOG00000007218 SLC25A1 (ENSPFOG00000007275) pi4kaa (ENSPFOG00000007319) MARVELD2 (ENSPFOG00000024364) oclna (ENSPFOG00000008118) ENSPFOG00000008246 ENSPFOG00000008256 tor4aa (ENSPFOG00000008373) NAA25 (ENSPFOG00000008401) pitpnb (ENSPFOG00000008804) ENSPFOG00000008906 ENSPFOG00000024572 pla2g3 (ENSPFOG00000009301) ENSPFOG00000009351 ptpn11a (ENSPFOG00000009691) Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 241 ENSPLAG00000021644 #22 NEU3 (ENSPLAG00000021637) #22 NEU3 (ENSPLAG00000021631) #22 NEU3 (ENSPLAG00000021617) #22 ENSPLAG00000021603 SLC25A1 (ENSPLAG00000021594) pi4kaa (ENSPLAG00000021572) MARVELD2 (ENSPLAG00000021488) oclna (ENSPLAG00000021455) ENSPLAG00000021443 ENSPLAG00000021433 tor4aa (ENSPLAG00000021408) brap (ENSPLAG00000021393) NAA25 (ENSPLAG00000021358) pitpnb (ENSPLAG00000021281) ENSPLAG00000021251 pla2g3 (ENSPLAG00000021236) ENSPLAG00000021204 Sailfin molly MODERN SPECIES 241 ENSPLAG00000021644 #22 NEU3 (ENSPLAG00000021637) #22 NEU3 (ENSPLAG00000021631) #22 NEU3 (ENSPLAG00000021617) #22 ENSPLAG00000021603 SLC25A1 (ENSPLAG00000021594) pi4kaa (ENSPLAG00000021572) MARVELD2 (ENSPLAG00000021488) oclna (ENSPLAG00000021455) ENSPLAG00000021443 ENSPLAG00000021433 tor4aa (ENSPLAG00000021408) brap (ENSPLAG00000021393) NAA25 (ENSPLAG00000021358) pitpnb (ENSPLAG00000021281) ENSPLAG00000021251 pla2g3 (ENSPLAG00000021236) ENSPLAG00000021204 ptpn11a (ENSPLAG00000021184) Platyfish MODERN SPECIES 22 PURB (ENSXMAG00000020285) ENSXMAG00000001168 ENSXMAG00000001176 NEU3 (ENSXMAG00000001188) #22 CNNM4 (ENSXMAG00000001195) ENSXMAG00000001208 ENSXMAG00000021071 UBE2L5 (ENSXMAG00000001950) ckmt2a (ENSXMAG00000001254) RASGRF2 (ENSXMAG00000001285) ENSXMAG00000026627 #22 ENSXMAG00000029262 #22 ENSXMAG00000022816 #22 ENSXMAG00000023874 #22 ENSXMAG00000021503 NEU3 (ENSXMAG00000024524) #22 SLC25A1 (ENSXMAG00000004598) ENSXMAG00000028527 pi4kaa (ENSXMAG00000004531) MARVELD2 (ENSXMAG00000004516) oclna (ENSXMAG00000004510) ANKRD34B (ENSXMAG00000019595) VDAC3 (ENSXMAG00000004494) tor4aa (ENSXMAG00000004491) brap (ENSXMAG00000005915) NAA25 (ENSXMAG00000005930) pitpnb (ENSXMAG00000030067) ENSXMAG00000004477 pla2g3 (ENSXMAG00000004476) ENSXMAG00000029628 ENSXMAG00000025197 NAME_4 ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 Sheepshead minnow MODERN SPECIES 1893 oclna (ENSCVAG00000007578) ENSCVAG00000000206 NEU3 (ENSCVAG00000007505) #22 ENSCVAG00000007493 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.e.b #22 Turquoise killifish MODERN SPECIES 1611 NUDCD3 (ENSNFUG00015012047) MRPS24 (ENSNFUG00015012040) gnsb (ENSNFUG00015011217) polm (ENSNFUG00015011030) ved (ENSNFUG00015010913) PURB (ENSNFUG00015010894) ENSNFUG00015010889 ENSNFUG00015010886 CNNM4 (ENSNFUG00015010649) ENSNFUG00015010493 ENSNFUG00015010366 ENSNFUG00015010340 UBE2L5 (ENSNFUG00015010265) CKMT2 (ENSNFUG00015010050) RASGRF2 (ENSNFUG00015008227) ENSNFUG00015008116 #22 ENSNFUG00015008111 oclna (ENSNFUG00015008106) MARVELD2 (ENSNFUG00015008100) aebp1a (ENSNFUG00015008027) pnx (ENSNFUG00015008020) ash2l (ENSNFUG00015007737) grk5 (ENSNFUG00015007368) ENSNFUG00015007331 SCARB1 (ENSNFUG00015007316) ENSNFUG00015007303 ENSNFUG00015007297 tacr1b (ENSNFUG00015007292) SLC4A5 (ENSNFUG00015004910) SEZ6L (ENSNFUG00015004382) ATP6V1B2 (ENSNFUG00015003929) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000180156 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b Cichlidae ANCESTRAL SPECIES 10 ENSGT00550000074946 ENSGT00940000158107.a.a ENSGT00940000165717 ENSGT01030000234539.b.b.a.i ENSGT00390000003652.d ENSGT00950000183125.b.a.a.a.a.a ENSGT00940000158973.a.b ENSGT00940000158444 ENSGT00390000011179 ENSGT00940000165439 ENSGT00940000158490 ENSGT00940000167350 ENSGT00950000183162.a.b.i.b ENSGT00940000170783 ENSGT00940000161102 ENSGT00950000182944.A.b.c.e #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b ENSGT00500000044909 Midas cichlid MODERN SPECIES 1083 ddx56 (ENSACIG00000013747) DUSP26 (ENSACIG00000013729) ENSACIG00000013717 ENSACIG00000013674 ENSACIG00000013616 ENSACIG00000013573 CAMK2B (ENSACIG00000013545) nudcd3 (ENSACIG00000013527) mrps24 (ENSACIG00000013492) gnsb (ENSACIG00000013336) polm (ENSACIG00000013229) ved (ENSACIG00000013202) PURB (ENSACIG00000013197) ENSACIG00000013181 ENSACIG00000013138 NEU3 (ENSACIG00000013098) #22 CNNM4 (ENSACIG00000013069) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000161102 ENSGT00950000182944.A.b.c.e #22 ENSGT00940000156317.w.a ENSGT00940000167011 ENSGT00940000154290.b ENSGT00940000153654.ve.b ENSGT00950000182772.B.a.a.g ENSGT00940000155679.d ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT01030000235069 ENSGT00550000074856.c.a ENSGT00950000182869.e.b.g.b ENSGT00950000182888.b ENSGT00500000044909 Nile tilapia MODERN SPECIES 19 crata (ENSONIG00000011577) crata (ENSONIG00000011580) ENSONIG00000011584 tln1 (ENSONIG00000011589) hmgcs1 (ENSONIG00000011599) YTHDC2 (ENSONIG00000011601) dcp2 (ENSONIG00000033239) ENSONIG00000031888 psmb10 (ENSONIG00000011604) ENSONIG00000011605 PURG (ENSONIG00000041233) slc38a9 (ENSONIG00000011618) nrg1 (ENSONIG00000011622) il1b (ENSONIG00000011230) ENSONIG00000011231 NEU3 (ENSONIG00000011232) #22 CNNM4 (ENSONIG00000011234) ENSONIG00000011236 ENSONIG00000011238 ENSONIG00000011239 ckmt2a (ENSONIG00000011242) RASGRF2 (ENSONIG00000011247) ANKRD34B (ENSONIG00000041287) oclna (ENSONIG00000011260) MARVELD2 (ENSONIG00000011263) pi4kaa (ENSONIG00000011267) SLC25A1 (ENSONIG00000011285) ENSONIG00000031339 VDAC3 (ENSONIG00000031190) tor4aa (ENSONIG00000011290) brap (ENSONIG00000011292) Ovalentaria ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f #22 Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f.a #22 Platyfish DUPLICATION Platyfish DUPLICATION Platyfish MODERN SPECIES 22 pitpnb (ENSXMAG00000030067) NAA25 (ENSXMAG00000005930) brap (ENSXMAG00000005915) tor4aa (ENSXMAG00000004491) VDAC3 (ENSXMAG00000004494) ANKRD34B (ENSXMAG00000019595) oclna (ENSXMAG00000004510) MARVELD2 (ENSXMAG00000004516) pi4kaa (ENSXMAG00000004531) ENSXMAG00000028527 SLC25A1 (ENSXMAG00000004598) NEU3 (ENSXMAG00000024524) #22 ENSXMAG00000021503 ENSXMAG00000023874 #22 ENSXMAG00000022816 #22 ENSXMAG00000029262 #22 ENSXMAG00000026627 #22 RASGRF2 (ENSXMAG00000001285) ckmt2a (ENSXMAG00000001254) UBE2L5 (ENSXMAG00000001950) ENSXMAG00000021071 ENSXMAG00000001208 CNNM4 (ENSXMAG00000001195) NEU3 (ENSXMAG00000001188) #22 ENSXMAG00000001176 ENSXMAG00000001168 PURB (ENSXMAG00000020285) ved (ENSXMAG00000001165) polm (ENSXMAG00000001138) gnsb (ENSXMAG00000018977) mrps24 (ENSXMAG00000018973) Platyfish MODERN SPECIES 22 pla2g3 (ENSXMAG00000004476) ENSXMAG00000004477 pitpnb (ENSXMAG00000030067) NAA25 (ENSXMAG00000005930) brap (ENSXMAG00000005915) tor4aa (ENSXMAG00000004491) VDAC3 (ENSXMAG00000004494) ANKRD34B (ENSXMAG00000019595) oclna (ENSXMAG00000004510) MARVELD2 (ENSXMAG00000004516) pi4kaa (ENSXMAG00000004531) ENSXMAG00000028527 SLC25A1 (ENSXMAG00000004598) NEU3 (ENSXMAG00000024524) #22 ENSXMAG00000021503 ENSXMAG00000023874 #22 ENSXMAG00000022816 #22 ENSXMAG00000029262 #22 ENSXMAG00000026627 #22 RASGRF2 (ENSXMAG00000001285) ckmt2a (ENSXMAG00000001254) UBE2L5 (ENSXMAG00000001950) ENSXMAG00000021071 ENSXMAG00000001208 CNNM4 (ENSXMAG00000001195) NEU3 (ENSXMAG00000001188) #22 ENSXMAG00000001176 ENSXMAG00000001168 PURB (ENSXMAG00000020285) ved (ENSXMAG00000001165) polm (ENSXMAG00000001138) Platyfish MODERN SPECIES 22 ENSXMAG00000004477 pitpnb (ENSXMAG00000030067) NAA25 (ENSXMAG00000005930) brap (ENSXMAG00000005915) tor4aa (ENSXMAG00000004491) VDAC3 (ENSXMAG00000004494) ANKRD34B (ENSXMAG00000019595) oclna (ENSXMAG00000004510) MARVELD2 (ENSXMAG00000004516) pi4kaa (ENSXMAG00000004531) ENSXMAG00000028527 SLC25A1 (ENSXMAG00000004598) NEU3 (ENSXMAG00000024524) #22 ENSXMAG00000021503 ENSXMAG00000023874 #22 ENSXMAG00000022816 #22 ENSXMAG00000029262 #22 ENSXMAG00000026627 #22 RASGRF2 (ENSXMAG00000001285) ckmt2a (ENSXMAG00000001254) UBE2L5 (ENSXMAG00000001950) ENSXMAG00000021071 ENSXMAG00000001208 CNNM4 (ENSXMAG00000001195) NEU3 (ENSXMAG00000001188) #22 ENSXMAG00000001176 ENSXMAG00000001168 PURB (ENSXMAG00000020285) ved (ENSXMAG00000001165) polm (ENSXMAG00000001138) gnsb (ENSXMAG00000018977) Poecilia DUPLICATION Poecilia DUPLICATION Poecilia ANCESTRAL SPECIES 12 ENSGT00940000155143 ENSGT00940000153876.B ENSGT00940000157468.b.f ENSGT00940000165179.a ENSGT00580000081898.b ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.a.g ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT00550000074856.c.a ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00940000155679.d ENSGT00950000182772.B.a.a.g ENSGT00940000153654.ve.b ENSGT00940000154290.b ENSGT00940000167011 ENSGT00940000156317.w.a ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000161102 ENSGT00940000170783 ENSGT00950000183162.a.b.i.b ENSGT00940000167350 ENSGT00940000158490 ENSGT00940000165439 ENSGT00390000011179 Guppy MODERN SPECIES 442 tmed2 (ENSPREG00000016617) ptpn11a (ENSPREG00000016594) ENSPREG00000016571 pla2g3 (ENSPREG00000016556) ENSPREG00000016532 pitpnb (ENSPREG00000016510) NAA25 (ENSPREG00000016454) brap (ENSPREG00000016387) tor4aa (ENSPREG00000016363) ENSPREG00000016338 ENSPREG00000016333 oclna (ENSPREG00000016314) MARVELD2 (ENSPREG00000016287) pi4kaa (ENSPREG00000016173) SLC25A1 (ENSPREG00000016126) ENSPREG00000016047 #22 ENSPREG00000016017 #22 ENSPREG00000015971 #22 RASGRF2 (ENSPREG00000015734) ckmt2a (ENSPREG00000015649) UBE2L5 (ENSPREG00000015634) ENSPREG00000015611 ENSPREG00000015579 CNNM4 (ENSPREG00000015553) NEU3 (ENSPREG00000015543) #22 ENSPREG00000015517 ENSPREG00000015501 PURB (ENSPREG00000015491) ved (ENSPREG00000015482) polm (ENSPREG00000015468) gnsb (ENSPREG00000015426) NAME_6 ANCESTRAL SPECIES 108 ENSGT00940000157468.b.f ENSGT00940000165179.a ENSGT00580000081898.b ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.a.g ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT00550000074856.c.a ENSGT00950000183116.b.a.a.b.a.b.n.a.a.b ENSGT00950000182944.A.b.c.e.b #22 ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00940000155679.d ENSGT00950000182772.B.a.a.g ENSGT00940000153654.ve.b ENSGT00940000154290.b ENSGT00940000167011 ENSGT00940000156317.w.a ENSGT00950000182944.A.b.c.e.a.b #22 ENSGT00950000182944.A.b.c.e.a.a #22 ENSGT00940000161102 ENSGT00940000170783 ENSGT00950000183162.a.b.i.b ENSGT00940000167350 ENSGT00940000158490 ENSGT00940000165439 Sailfin molly MODERN SPECIES 241 pla2g3 (ENSPLAG00000021236) ENSPLAG00000021251 pitpnb (ENSPLAG00000021281) NAA25 (ENSPLAG00000021358) brap (ENSPLAG00000021393) tor4aa (ENSPLAG00000021408) ENSPLAG00000021433 ENSPLAG00000021443 oclna (ENSPLAG00000021455) MARVELD2 (ENSPLAG00000021488) pi4kaa (ENSPLAG00000021572) SLC25A1 (ENSPLAG00000021594) ENSPLAG00000021603 NEU3 (ENSPLAG00000021617) #22 NEU3 (ENSPLAG00000021631) #22 NEU3 (ENSPLAG00000021637) #22 ENSPLAG00000021644 #22 Poecilia ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f.a.c.b #22 Guppy MODERN SPECIES 442 ENSPREG00000016571 pla2g3 (ENSPREG00000016556) ENSPREG00000016532 pitpnb (ENSPREG00000016510) NAA25 (ENSPREG00000016454) brap (ENSPREG00000016387) tor4aa (ENSPREG00000016363) ENSPREG00000016338 ENSPREG00000016333 oclna (ENSPREG00000016314) MARVELD2 (ENSPREG00000016287) pi4kaa (ENSPREG00000016173) SLC25A1 (ENSPREG00000016126) ENSPREG00000016047 #22 ENSPREG00000016017 #22 ENSPREG00000015971 #22 RASGRF2 (ENSPREG00000015734) ckmt2a (ENSPREG00000015649) UBE2L5 (ENSPREG00000015634) ENSPREG00000015611 ENSPREG00000015579 CNNM4 (ENSPREG00000015553) NEU3 (ENSPREG00000015543) #22 ENSPREG00000015517 ENSPREG00000015501 PURB (ENSPREG00000015491) ved (ENSPREG00000015482) polm (ENSPREG00000015468) gnsb (ENSPREG00000015426) mrps24 (ENSPREG00000015401) nudcd3 (ENSPREG00000015381) Poecilia ANCESTRAL SPECIES 12 ENSGT00940000153876.B ENSGT00940000157468.b.f ENSGT00940000165179.a ENSGT00580000081898.b ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.a.g ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT00550000074856.c.a ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00940000155679.d ENSGT00950000182772.B.a.a.g ENSGT00940000153654.ve.b ENSGT00940000154290.b ENSGT00940000167011 ENSGT00940000156317.w.a ENSGT00950000182944.A.b.c.e.a #22 ENSGT00940000161102 ENSGT00940000170783 ENSGT00950000183162.a.b.i.b ENSGT00940000167350 ENSGT00940000158490 ENSGT00940000165439 ENSGT00390000011179 ENSGT00940000158444 NAME_6 ANCESTRAL SPECIES 108 ENSGT00940000165179.a ENSGT00580000081898.b ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.a.g ENSGT00390000012355.A.a.a.b ENSGT00730000110989.c.a ENSGT00940000155771.c ENSGT00550000074798.a.a ENSGT00550000074856.c.a ENSGT00950000183116.b.a.a.b.a.b.n.a.a.b ENSGT00950000182944.A.b.c.e.b #22 ENSGT00950000182944.A.b.c.f.a.c.a #22 ENSGT00950000182944.A.b.c.f.a.d #22 ENSGT00940000155679.d ENSGT00950000182772.B.a.a.g ENSGT00940000153654.ve.b ENSGT00940000154290.b ENSGT00940000167011 ENSGT00940000156317.w.a ENSGT00950000182944.A.b.c.e.a.b #22 ENSGT00950000182944.A.b.c.e.a.a #22 ENSGT00940000161102 ENSGT00940000170783 ENSGT00950000183162.a.b.i.b ENSGT00940000167350 ENSGT00940000158490 ENSGT00940000165439 ENSGT00390000011179 Amazon molly MODERN SPECIES 686 ENSPFOG00000009351 pla2g3 (ENSPFOG00000009301) ENSPFOG00000024572 ENSPFOG00000008906 pitpnb (ENSPFOG00000008804) NAA25 (ENSPFOG00000008401) tor4aa (ENSPFOG00000008373) ENSPFOG00000008256 ENSPFOG00000008246 oclna (ENSPFOG00000008118) MARVELD2 (ENSPFOG00000024364) pi4kaa (ENSPFOG00000007319) SLC25A1 (ENSPFOG00000007275) ENSPFOG00000007218 NEU3 (ENSPFOG00000007202) #22 ENSPFOG00000007196 #22 RASGRF2 (ENSPFOG00000024630) Sailfin molly MODERN SPECIES 241 ENSPLAG00000021251 pitpnb (ENSPLAG00000021281) NAA25 (ENSPLAG00000021358) brap (ENSPLAG00000021393) tor4aa (ENSPLAG00000021408) ENSPLAG00000021433 ENSPLAG00000021443 oclna (ENSPLAG00000021455) MARVELD2 (ENSPLAG00000021488) pi4kaa (ENSPLAG00000021572) SLC25A1 (ENSPLAG00000021594) ENSPLAG00000021603 NEU3 (ENSPLAG00000021617) #22 NEU3 (ENSPLAG00000021631) #22 NEU3 (ENSPLAG00000021637) #22 ENSPLAG00000021644 #22 Guppy MODERN SPECIES 442 ptpn11a (ENSPREG00000016594) ENSPREG00000016571 pla2g3 (ENSPREG00000016556) ENSPREG00000016532 pitpnb (ENSPREG00000016510) NAA25 (ENSPREG00000016454) brap (ENSPREG00000016387) tor4aa (ENSPREG00000016363) ENSPREG00000016338 ENSPREG00000016333 oclna (ENSPREG00000016314) MARVELD2 (ENSPREG00000016287) pi4kaa (ENSPREG00000016173) SLC25A1 (ENSPREG00000016126) ENSPREG00000016047 #22 ENSPREG00000016017 #22 ENSPREG00000015971 #22 RASGRF2 (ENSPREG00000015734) ckmt2a (ENSPREG00000015649) UBE2L5 (ENSPREG00000015634) ENSPREG00000015611 ENSPREG00000015579 CNNM4 (ENSPREG00000015553) NEU3 (ENSPREG00000015543) #22 ENSPREG00000015517 ENSPREG00000015501 PURB (ENSPREG00000015491) ved (ENSPREG00000015482) polm (ENSPREG00000015468) gnsb (ENSPREG00000015426) mrps24 (ENSPREG00000015401) Poeciliinae ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f.b #22 Platyfish MODERN SPECIES 22 NAA25 (ENSXMAG00000005930) brap (ENSXMAG00000005915) tor4aa (ENSXMAG00000004491) VDAC3 (ENSXMAG00000004494) ANKRD34B (ENSXMAG00000019595) oclna (ENSXMAG00000004510) MARVELD2 (ENSXMAG00000004516) pi4kaa (ENSXMAG00000004531) ENSXMAG00000028527 SLC25A1 (ENSXMAG00000004598) NEU3 (ENSXMAG00000024524) #22 ENSXMAG00000021503 ENSXMAG00000023874 #22 ENSXMAG00000022816 #22 ENSXMAG00000029262 #22 ENSXMAG00000026627 #22 RASGRF2 (ENSXMAG00000001285) ckmt2a (ENSXMAG00000001254) UBE2L5 (ENSXMAG00000001950) ENSXMAG00000021071 ENSXMAG00000001208 CNNM4 (ENSXMAG00000001195) NEU3 (ENSXMAG00000001188) #22 ENSXMAG00000001176 ENSXMAG00000001168 PURB (ENSXMAG00000020285) ved (ENSXMAG00000001165) polm (ENSXMAG00000001138) gnsb (ENSXMAG00000018977) mrps24 (ENSXMAG00000018973) nudcd3 (ENSXMAG00000018966) NAME_4 ANCESTRAL SPECIES ENSGT00950000182944.A.b.c.f #22 Sheepshead minnow MODERN SPECIES 1246 ENSCVAG00000014728 #22 ENSCVAG00000014762 ENSCVAG00000014771 RASGRF2 (ENSCVAG00000014837) ckmt2a (ENSCVAG00000014862) ENSCVAG00000014876 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 Ovalentaria ANCESTRAL SPECIES ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Turquoise killifish DUPLICATION Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1611 ENSNFUG00015019316 ENSNFUG00015019102 ENSNFUG00015018738 stoml2 (ENSNFUG00015018719) PIGO (ENSNFUG00015018703) ENSNFUG00015018698 PHF24 (ENSNFUG00015018695) prkab1a (ENSNFUG00015018692) PLA2G1B (ENSNFUG00015018689) ENSNFUG00015018683 ENSNFUG00015018682 ENSNFUG00015018680 ENSNFUG00015018678 ENSNFUG00015018675 LRRTM4 (ENSNFUG00015018670) ENSNFUG00015018666 #22 ENSNFUG00015018665 rxraa (ENSNFUG00015018214) WDR5 (ENSNFUG00015018190) ENSNFUG00015018173 VAV2 (ENSNFUG00015013680) LRRTM4 (ENSNFUG00015013474) ENSNFUG00015013470 ENSNFUG00015013437 ADRA1AB (ENSNFUG00015013428) DPYSL2B (ENSNFUG00015009496) BNIP3LB (ENSNFUG00015009284) PPP2R2A (ENSNFUG00015007904) ENSNFUG00015007824 ENSNFUG00015007820 gsna (ENSNFUG00015006648) Turquoise killifish MODERN SPECIES 1625 btbd7 (ENSNFUG00015019749) UBR7 (ENSNFUG00015019729) ITPK1 (ENSNFUG00015019694) ENSNFUG00015019679 ENSNFUG00015019648 HSPA4L (ENSNFUG00015019206) chmp3 (ENSNFUG00015019191) ENSNFUG00015019183 mrpl35 (ENSNFUG00015019177) ENSNFUG00015019159 ZFYVE28 (ENSNFUG00015019072) FGFRL1 (ENSNFUG00015019058) ENSNFUG00015019052 KIF15 (ENSNFUG00015018987) ENSNFUG00015018980 ENSNFUG00015018979 #22 RTN1 (ENSNFUG00015018823) LRRC9 (ENSNFUG00015018811) PCNXL4 (ENSNFUG00015018756) dhrs7 (ENSNFUG00015018749) PPM1A (ENSNFUG00015018747) six6a (ENSNFUG00015018745) SIX1 (ENSNFUG00015018742) SIX4B (ENSNFUG00015018740) MNAT1 (ENSNFUG00015018737) TRMT5 (ENSNFUG00015018735) slc38a6 (ENSNFUG00015018566) prkcha (ENSNFUG00015017549) hif1ab (ENSNFUG00015016961) HTRA2 (ENSNFUG00015016892) MIS18BP1 (ENSNFUG00015016877) Turquoise killifish MODERN SPECIES 1610 SEMA3AA (ENSNFUG00015002856) ENSNFUG00015003399 ENSNFUG00015003423 cacna2d1a (ENSNFUG00015003476) hgfa (ENSNFUG00015003689) pax4 (ENSNFUG00015003700) snd1 (ENSNFUG00015003758) LRRC4.1 (ENSNFUG00015004107) ENSNFUG00015004109 Nfu_g_1_012058 (ENSNFUG00015004110) PRRT4 (ENSNFUG00015004112) impdh1b (ENSNFUG00015004128) ENSNFUG00015004209 FAM3C (ENSNFUG00015004219) ENSNFUG00015004223 ENSNFUG00015004227 #22 BTG1 (ENSNFUG00015004230) ENSNFUG00015004237 DCN (ENSNFUG00015004249) lum (ENSNFUG00015004253) kera (ENSNFUG00015004256) epyc (ENSNFUG00015004258) ENSNFUG00015004268 si:ch211-244b2.4 (ENSNFUG00015004277) ENSNFUG00015004284 scyl2 (ENSNFUG00015004308) DEPDC4 (ENSNFUG00015004366) tcp11l2 (ENSNFUG00015004375) ENSNFUG00015004386 anks1b (ENSNFUG00015004405) ENSNFUG00015004435 Mangrove rivulus MODERN SPECIES 138 ENSKMAG00000018814 ENSKMAG00000018867 ENSKMAG00000018880 ENSKMAG00000018893 ENSKMAG00000018914 elof1 (ENSKMAG00000018948) pld6 (ENSKMAG00000018960) ENSKMAG00000018973 tspan34 (ENSKMAG00000018993) dand5 (ENSKMAG00000019010) NFIX (ENSKMAG00000019092) rnf11a (ENSKMAG00000019233) ENSKMAG00000019249 ENSKMAG00000019262 ENSKMAG00000019283 ENSKMAG00000019305 #22 ENSKMAG00000019315 ENSKMAG00000019325 fdx2 (ENSKMAG00000019336) s1pr5b (ENSKMAG00000019347) keap1b (ENSKMAG00000019360) ENSKMAG00000019395 CDKN2D (ENSKMAG00000019404) ap1m2 (ENSKMAG00000019421) ENSKMAG00000019458 SMARCA4 (ENSKMAG00000019518) atg4da (ENSKMAG00000019629) MAST1 (ENSKMAG00000019681) rnaseh2a (ENSKMAG00000019829) SOX10 (ENSKMAG00000019870) KCNJ4 (ENSKMAG00000019890) Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Poecilia ANCESTRAL SPECIES 6 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.d ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a NAME_6 ANCESTRAL SPECIES 47 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.d ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Sailfin molly MODERN SPECIES 4 ENSPLAG00000017891 ENSPLAG00000017898 ENSPLAG00000017904 ENSPLAG00000017957 PLPPR2 (ENSPLAG00000018007) elof1 (ENSPLAG00000018024) pld6 (ENSPLAG00000018026) RAB3D (ENSPLAG00000018052) tspan34 (ENSPLAG00000018292) dand5 (ENSPLAG00000018314) NFIX (ENSPLAG00000018337) rnf11a (ENSPLAG00000018356) HMOX1 (ENSPLAG00000018364) ENSPLAG00000018376 ENSPLAG00000018384 ENSPLAG00000018392 #22 ENSPLAG00000018396 ENSPLAG00000018403 fdx2 (ENSPLAG00000018407) s1pr5b (ENSPLAG00000018413) keap1b (ENSPLAG00000018426) ENSPLAG00000018432 CDKN2D (ENSPLAG00000018442) ap1m2 (ENSPLAG00000018476) ENSPLAG00000018526 SMARCA4 (ENSPLAG00000018616) atg4da (ENSPLAG00000018657) MAST1 (ENSPLAG00000018711) rnaseh2a (ENSPLAG00000018723) Amazon molly MODERN SPECIES 295 ENSPFOG00000023940 ENSPFOG00000020143 ENSPFOG00000013777 PLPPR2 (ENSPFOG00000013696) elof1 (ENSPFOG00000023035) pld6 (ENSPFOG00000013689) RAB3D (ENSPFOG00000013657) tspan34 (ENSPFOG00000013561) dand5 (ENSPFOG00000013550) NFIX (ENSPFOG00000013453) rnf11a (ENSPFOG00000013436) HMOX1 (ENSPFOG00000013418) ENSPFOG00000022531 ENSPFOG00000013403 ENSPFOG00000013394 ENSPFOG00000013392 #22 ENSPFOG00000023655 fdx2 (ENSPFOG00000013381) s1pr5b (ENSPFOG00000020141) keap1b (ENSPFOG00000013318) ENSPFOG00000013303 CDKN2D (ENSPFOG00000013301) ap1m2 (ENSPFOG00000023907) ENSPFOG00000013091 SMARCA4 (ENSPFOG00000012930) atg4da (ENSPFOG00000012852) MAST1 (ENSPFOG00000012690) rnaseh2a (ENSPFOG00000012627) ENSPFOG00000012609 ENSPFOG00000012599 ENSPFOG00000021920 Guppy MODERN SPECIES 439 ENSPREG00000013201 ENSPREG00000013211 ENSPREG00000013226 ENSPREG00000013236 PLPPR2 (ENSPREG00000013258) elof1 (ENSPREG00000013288) pld6 (ENSPREG00000013297) RAB3D (ENSPREG00000013308) tspan34 (ENSPREG00000013321) dand5 (ENSPREG00000013337) NFIX (ENSPREG00000013386) rnf11a (ENSPREG00000013482) HMOX1 (ENSPREG00000013545) ENSPREG00000013750 ENSPREG00000013765 ENSPREG00000013771 #22 ENSPREG00000013775 ENSPREG00000013782 fdx2 (ENSPREG00000013790) s1pr5b (ENSPREG00000013844) keap1b (ENSPREG00000013858) ENSPREG00000013872 CDKN2D (ENSPREG00000013882) ap1m2 (ENSPREG00000013898) ENSPREG00000014073 SMARCA4 (ENSPREG00000014823) atg4da (ENSPREG00000014939) MAST1 (ENSPREG00000014975) rnaseh2a (ENSPREG00000015015) ENSPREG00000015036 ENSPREG00000015145 Platyfish MODERN SPECIES 19 ENSXMAG00000029813 ENSXMAG00000024114 ENSXMAG00000021764 PLPPR2 (ENSXMAG00000017379) elof1 (ENSXMAG00000023395) pld6 (ENSXMAG00000017375) ENSXMAG00000017368 tspan34 (ENSXMAG00000024059) dand5 (ENSXMAG00000017343) NFIX (ENSXMAG00000007238) rnf11a (ENSXMAG00000022184) HMOX1 (ENSXMAG00000007220) ENSXMAG00000025662 ENSXMAG00000025089 ENSXMAG00000027376 ENSXMAG00000026103 #22 ENSXMAG00000019816 ENSXMAG00000020994 fdx2 (ENSXMAG00000005511) s1pr5b (ENSXMAG00000019815) keap1b (ENSXMAG00000021448) ENSXMAG00000007179 CDKN2D (ENSXMAG00000022409) ap1m2 (ENSXMAG00000007151) ENSXMAG00000007105 SMARCA4 (ENSXMAG00000007030) atg4da (ENSXMAG00000007016) MAST1 (ENSXMAG00000006970) ENSXMAG00000027436 rnaseh2a (ENSXMAG00000006953) ENSXMAG00000021473 NAME_4 ANCESTRAL SPECIES 73 ENSGT00940000170963 ENSGT00940000166223.b.a ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000158145.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a.d ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.d ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Sheepshead minnow MODERN SPECIES 674 ENSCVAG00000003694 ENSCVAG00000003702 RAB3D (ENSCVAG00000003713) tspan34 (ENSCVAG00000003720) dand5 (ENSCVAG00000003728) NFIX (ENSCVAG00000003802) rnf11a (ENSCVAG00000003814) HMOX1 (ENSCVAG00000003821) ENSCVAG00000003832 ENSCVAG00000003825 ENSCVAG00000003838 ENSCVAG00000003846 #22 ENSCVAG00000003854 zglp1 (ENSCVAG00000003889) fdx2 (ENSCVAG00000003897) Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.d ENSGT00940000181262 ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a ENSGT00940000154819.a.b.c.b.c.b ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Midas cichlid DUPLICATION Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 1199 ENSACIG00000003991 ENSACIG00000003925 elof1 (ENSACIG00000003834) pld6 (ENSACIG00000003802) RAB3D (ENSACIG00000003781) tspan34 (ENSACIG00000003708) dand5 (ENSACIG00000003692) NFIX (ENSACIG00000003674) rnf11a (ENSACIG00000003661) HMOX1 (ENSACIG00000003536) ENSACIG00000003529 ENSACIG00000003519 NEU3 (ENSACIG00000003494) #22 NEU3 (ENSACIG00000003415) #22 ENSACIG00000003395 #22 NEU3 (ENSACIG00000003385) #22 ENSACIG00000003377 zglp1 (ENSACIG00000003353) fdx2 (ENSACIG00000003335) s1pr5b (ENSACIG00000003324) keap1b (ENSACIG00000003284) ENSACIG00000003274 CDKN2D (ENSACIG00000003266) ap1m2 (ENSACIG00000003239) ENSACIG00000003155 ENSACIG00000003107 SMARCA4 (ENSACIG00000003035) atg4da (ENSACIG00000003005) MAST1 (ENSACIG00000002693) rnaseh2a (ENSACIG00000002658) ENSACIG00000002643 Midas cichlid MODERN SPECIES 1199 ENSACIG00000004027 ENSACIG00000004010 ENSACIG00000003991 ENSACIG00000003925 elof1 (ENSACIG00000003834) pld6 (ENSACIG00000003802) RAB3D (ENSACIG00000003781) tspan34 (ENSACIG00000003708) dand5 (ENSACIG00000003692) NFIX (ENSACIG00000003674) rnf11a (ENSACIG00000003661) HMOX1 (ENSACIG00000003536) ENSACIG00000003529 ENSACIG00000003519 NEU3 (ENSACIG00000003494) #22 NEU3 (ENSACIG00000003415) #22 ENSACIG00000003395 #22 NEU3 (ENSACIG00000003385) #22 ENSACIG00000003377 zglp1 (ENSACIG00000003353) fdx2 (ENSACIG00000003335) s1pr5b (ENSACIG00000003324) keap1b (ENSACIG00000003284) ENSACIG00000003274 CDKN2D (ENSACIG00000003266) ap1m2 (ENSACIG00000003239) ENSACIG00000003155 ENSACIG00000003107 SMARCA4 (ENSACIG00000003035) atg4da (ENSACIG00000003005) MAST1 (ENSACIG00000002693) Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 1199 ENSACIG00000004010 ENSACIG00000003991 ENSACIG00000003925 elof1 (ENSACIG00000003834) pld6 (ENSACIG00000003802) RAB3D (ENSACIG00000003781) tspan34 (ENSACIG00000003708) dand5 (ENSACIG00000003692) NFIX (ENSACIG00000003674) rnf11a (ENSACIG00000003661) HMOX1 (ENSACIG00000003536) ENSACIG00000003529 ENSACIG00000003519 NEU3 (ENSACIG00000003494) #22 NEU3 (ENSACIG00000003415) #22 ENSACIG00000003395 #22 NEU3 (ENSACIG00000003385) #22 ENSACIG00000003377 zglp1 (ENSACIG00000003353) fdx2 (ENSACIG00000003335) s1pr5b (ENSACIG00000003324) keap1b (ENSACIG00000003284) ENSACIG00000003274 CDKN2D (ENSACIG00000003266) ap1m2 (ENSACIG00000003239) ENSACIG00000003155 ENSACIG00000003107 SMARCA4 (ENSACIG00000003035) atg4da (ENSACIG00000003005) MAST1 (ENSACIG00000002693) rnaseh2a (ENSACIG00000002658) Midas cichlid MODERN SPECIES 1199 ENSACIG00000004043 ENSACIG00000004027 ENSACIG00000004010 ENSACIG00000003991 ENSACIG00000003925 elof1 (ENSACIG00000003834) pld6 (ENSACIG00000003802) RAB3D (ENSACIG00000003781) tspan34 (ENSACIG00000003708) dand5 (ENSACIG00000003692) NFIX (ENSACIG00000003674) rnf11a (ENSACIG00000003661) HMOX1 (ENSACIG00000003536) ENSACIG00000003529 ENSACIG00000003519 NEU3 (ENSACIG00000003494) #22 NEU3 (ENSACIG00000003415) #22 ENSACIG00000003395 #22 NEU3 (ENSACIG00000003385) #22 ENSACIG00000003377 zglp1 (ENSACIG00000003353) fdx2 (ENSACIG00000003335) s1pr5b (ENSACIG00000003324) keap1b (ENSACIG00000003284) ENSACIG00000003274 CDKN2D (ENSACIG00000003266) ap1m2 (ENSACIG00000003239) ENSACIG00000003155 ENSACIG00000003107 SMARCA4 (ENSACIG00000003035) atg4da (ENSACIG00000003005) Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000182944.A.b.d.e #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000182944.A.b.d.e #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000182944.A.b.d.e #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000182944.A.b.d.e #22 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.b.a ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.e #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a.b ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005023891 ENSMZEG00005023890 ENSMZEG00005023889 ENSMZEG00005023888 ENSMZEG00005023887 ENSMZEG00005023886 PLPPR2 (ENSMZEG00005023885) elof1 (ENSMZEG00005023883) pld6 (ENSMZEG00005023882) RAB3D (ENSMZEG00005023881) tspan34 (ENSMZEG00005023880) dand5 (ENSMZEG00005023879) NFIX (ENSMZEG00005023878) ENSMZEG00005023877 NEU3 (ENSMZEG00005023876) #22 NEU3 (ENSMZEG00005023875) #22 ENSMZEG00005023874 #22 ENSMZEG00005023873 ENSMZEG00005023872 fdx2 (ENSMZEG00005023871) s1pr5b (ENSMZEG00005023870) keap1b (ENSMZEG00005023869) ENSMZEG00005023868 CDKN2D (ENSMZEG00005023867) ap1m2 (ENSMZEG00005023866) ENSMZEG00005023865 ENSMZEG00005023864 ENSMZEG00005023863 ENSMZEG00005023862 SMARCA4 (ENSMZEG00005023861) atg4da (ENSMZEG00005023860) Eastern happy MODERN SPECIES 18 ENSACLG00000007210 ENSACLG00000007213 ENSACLG00000007220 ENSACLG00000007225 PLPPR2 (ENSACLG00000007519) elof1 (ENSACLG00000007539) pld6 (ENSACLG00000007544) RAB3D (ENSACLG00000007553) tspan34 (ENSACLG00000007580) dand5 (ENSACLG00000007596) NFIX (ENSACLG00000007600) rnf11a (ENSACLG00000007714) HMOX1 (ENSACLG00000007729) ENSACLG00000007737 ENSACLG00000007748 NEU3 (ENSACLG00000007753) #22 NEU3 (ENSACLG00000007762) #22 ENSACLG00000007765 #22 ENSACLG00000007772 ENSACLG00000007782 fdx2 (ENSACLG00000007805) s1pr5b (ENSACLG00000007818) keap1b (ENSACLG00000007822) ENSACLG00000007845 CDKN2D (ENSACLG00000007877) ap1m2 (ENSACLG00000007855) ENSACLG00000007886 ENSACLG00000007950 ENSACLG00000008000 SMARCA4 (ENSACLG00000008638) atg4da (ENSACLG00000008714) Nile tilapia MODERN SPECIES 18 ENSONIG00000021228 ENSONIG00000031268 ENSONIG00000032487 PLPPR2 (ENSONIG00000018084) elof1 (ENSONIG00000028218) pld6 (ENSONIG00000018083) RAB3D (ENSONIG00000037772) tspan34 (ENSONIG00000018079) dand5 (ENSONIG00000018078) NFIX (ENSONIG00000018077) rnf11a (ENSONIG00000037073) HMOX1 (ENSONIG00000018076) ENSONIG00000018073 ENSONIG00000018071 ENSONIG00000028184 NEU3 (ENSONIG00000018069) #22 neu3e (ENSONIG00000018070) #22 ENSONIG00000018068 ENSONIG00000033442 fdx2 (ENSONIG00000018067) s1pr5b (ENSONIG00000021227) keap1b (ENSONIG00000018066) ENSONIG00000018063 CDKN2D (ENSONIG00000032001) ap1m2 (ENSONIG00000018060) ENSONIG00000018056 SMARCA4 (ENSONIG00000018040) atg4da (ENSONIG00000031738) MAST1 (ENSONIG00000018034) rnaseh2a (ENSONIG00000018033) ENSONIG00000018032 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000154819.a.b.c.b.c.b ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Nile tilapia MODERN SPECIES 18 ENSONIG00000031268 ENSONIG00000032487 PLPPR2 (ENSONIG00000018084) elof1 (ENSONIG00000028218) pld6 (ENSONIG00000018083) RAB3D (ENSONIG00000037772) tspan34 (ENSONIG00000018079) dand5 (ENSONIG00000018078) NFIX (ENSONIG00000018077) rnf11a (ENSONIG00000037073) HMOX1 (ENSONIG00000018076) ENSONIG00000018073 ENSONIG00000018071 ENSONIG00000028184 NEU3 (ENSONIG00000018069) #22 neu3e (ENSONIG00000018070) #22 ENSONIG00000018068 ENSONIG00000033442 fdx2 (ENSONIG00000018067) s1pr5b (ENSONIG00000021227) keap1b (ENSONIG00000018066) ENSONIG00000018063 CDKN2D (ENSONIG00000032001) ap1m2 (ENSONIG00000018060) ENSONIG00000018056 SMARCA4 (ENSONIG00000018040) atg4da (ENSONIG00000031738) MAST1 (ENSONIG00000018034) rnaseh2a (ENSONIG00000018033) ENSONIG00000018032 KCNJ4 (ENSONIG00000018031) Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000154819.a.b.c.b.c.b ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Haplochromini ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.b.a ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.e #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a.b ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 Eastern happy MODERN SPECIES 18 ENSACLG00000007220 ENSACLG00000007225 PLPPR2 (ENSACLG00000007519) elof1 (ENSACLG00000007539) pld6 (ENSACLG00000007544) RAB3D (ENSACLG00000007553) tspan34 (ENSACLG00000007580) dand5 (ENSACLG00000007596) NFIX (ENSACLG00000007600) rnf11a (ENSACLG00000007714) HMOX1 (ENSACLG00000007729) ENSACLG00000007737 ENSACLG00000007748 NEU3 (ENSACLG00000007753) #22 NEU3 (ENSACLG00000007762) #22 ENSACLG00000007765 #22 ENSACLG00000007772 ENSACLG00000007782 fdx2 (ENSACLG00000007805) s1pr5b (ENSACLG00000007818) keap1b (ENSACLG00000007822) ENSACLG00000007845 CDKN2D (ENSACLG00000007877) ap1m2 (ENSACLG00000007855) ENSACLG00000007886 ENSACLG00000007950 ENSACLG00000008000 SMARCA4 (ENSACLG00000008638) atg4da (ENSACLG00000008714) MAST1 (ENSACLG00000009080) ENSACLG00000009128 Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005023890 ENSMZEG00005023889 ENSMZEG00005023888 ENSMZEG00005023887 ENSMZEG00005023886 PLPPR2 (ENSMZEG00005023885) elof1 (ENSMZEG00005023883) pld6 (ENSMZEG00005023882) RAB3D (ENSMZEG00005023881) tspan34 (ENSMZEG00005023880) dand5 (ENSMZEG00005023879) NFIX (ENSMZEG00005023878) ENSMZEG00005023877 NEU3 (ENSMZEG00005023876) #22 NEU3 (ENSMZEG00005023875) #22 ENSMZEG00005023874 #22 ENSMZEG00005023873 ENSMZEG00005023872 fdx2 (ENSMZEG00005023871) s1pr5b (ENSMZEG00005023870) keap1b (ENSMZEG00005023869) ENSMZEG00005023868 CDKN2D (ENSMZEG00005023867) ap1m2 (ENSMZEG00005023866) ENSMZEG00005023865 ENSMZEG00005023864 ENSMZEG00005023863 ENSMZEG00005023862 SMARCA4 (ENSMZEG00005023861) atg4da (ENSMZEG00005023860) ENSMZEG00005023859 P. nyererei MODERN SPECIES 643 ENSPNYG00000024017 ENSPNYG00000024016 #22 zglp1 (ENSPNYG00000024014) fdx2 (ENSPNYG00000024013) s1pr5b (ENSPNYG00000024012) keap1b (ENSPNYG00000024008) ENSPNYG00000024006 CDKN2D (ENSPNYG00000024004) ap1m2 (ENSPNYG00000024003) ENSPNYG00000024002 ENSPNYG00000024000 SMARCA4 (ENSPNYG00000023995) atg4da (ENSPNYG00000023991) MAST1 (ENSPNYG00000023989) ENSPNYG00000023988 ENSPNYG00000023987 rnaseh2a (ENSPNYG00000023986) Burton s mouthbrooder MODERN SPECIES 734 ENSHBUG00000007502 #22 ENSHBUG00000007027 ENSHBUG00000007015 fdx2 (ENSHBUG00000007004) s1pr5b (ENSHBUG00000006993) keap1b (ENSHBUG00000006989) ENSHBUG00000006982 CDKN2D (ENSHBUG00000006917) ap1m2 (ENSHBUG00000006969) ENSHBUG00000006790 ENSHBUG00000005484 ENSHBUG00000005468 SMARCA4 (ENSHBUG00000005447) atg4da (ENSHBUG00000005336) MAST1 (ENSHBUG00000005318) ENSHBUG00000005303 Lyretail cichlid MODERN SPECIES 301 ENSNBRG00000019558 ENSNBRG00000019549 ENSNBRG00000019539 ENSNBRG00000019525 ENSNBRG00000019508 elof1 (ENSNBRG00000019489) pld6 (ENSNBRG00000019473) RAB3D (ENSNBRG00000019454) tspan34 (ENSNBRG00000019428) dand5 (ENSNBRG00000019412) NFIX (ENSNBRG00000019307) rnf11a (ENSNBRG00000019250) HMOX1 (ENSNBRG00000019244) ENSNBRG00000019223 ENSNBRG00000019216 NEU3 (ENSNBRG00000019205) #22 ENSNBRG00000019197 zglp1 (ENSNBRG00000019171) fdx2 (ENSNBRG00000019149) s1pr5b (ENSNBRG00000019138) keap1b (ENSNBRG00000019129) ENSNBRG00000019117 CDKN2D (ENSNBRG00000019096) ap1m2 (ENSNBRG00000019060) ENSNBRG00000018963 ENSNBRG00000018933 SMARCA4 (ENSNBRG00000018865) atg4da (ENSNBRG00000018815) MAST1 (ENSNBRG00000018757) rnaseh2a (ENSNBRG00000018731) ENSNBRG00000018705 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000182944.A.b.d.f.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000182944.A.b.d.f.b #22 Haplochromini ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.b.a ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.f.b #22 ENSGT00950000182944.A.b.d.e #22 ENSGT00950000182944.A.b.d.f.a #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.c.a.a ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a.b ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j Eastern happy MODERN SPECIES 18 ENSACLG00000007213 ENSACLG00000007220 ENSACLG00000007225 PLPPR2 (ENSACLG00000007519) elof1 (ENSACLG00000007539) pld6 (ENSACLG00000007544) RAB3D (ENSACLG00000007553) tspan34 (ENSACLG00000007580) dand5 (ENSACLG00000007596) NFIX (ENSACLG00000007600) rnf11a (ENSACLG00000007714) HMOX1 (ENSACLG00000007729) ENSACLG00000007737 ENSACLG00000007748 NEU3 (ENSACLG00000007753) #22 NEU3 (ENSACLG00000007762) #22 ENSACLG00000007765 #22 ENSACLG00000007772 ENSACLG00000007782 fdx2 (ENSACLG00000007805) s1pr5b (ENSACLG00000007818) keap1b (ENSACLG00000007822) ENSACLG00000007845 CDKN2D (ENSACLG00000007877) ap1m2 (ENSACLG00000007855) ENSACLG00000007886 ENSACLG00000007950 ENSACLG00000008000 SMARCA4 (ENSACLG00000008638) atg4da (ENSACLG00000008714) MAST1 (ENSACLG00000009080) Zebra mbuna MODERN SPECIES 1109 rab11fip4b (ENSMZEG00005023892) ENSMZEG00005023891 ENSMZEG00005023890 ENSMZEG00005023889 ENSMZEG00005023888 ENSMZEG00005023887 ENSMZEG00005023886 PLPPR2 (ENSMZEG00005023885) elof1 (ENSMZEG00005023883) pld6 (ENSMZEG00005023882) RAB3D (ENSMZEG00005023881) tspan34 (ENSMZEG00005023880) dand5 (ENSMZEG00005023879) NFIX (ENSMZEG00005023878) ENSMZEG00005023877 NEU3 (ENSMZEG00005023876) #22 NEU3 (ENSMZEG00005023875) #22 ENSMZEG00005023874 #22 ENSMZEG00005023873 ENSMZEG00005023872 fdx2 (ENSMZEG00005023871) s1pr5b (ENSMZEG00005023870) keap1b (ENSMZEG00005023869) ENSMZEG00005023868 CDKN2D (ENSMZEG00005023867) ap1m2 (ENSMZEG00005023866) ENSMZEG00005023865 ENSMZEG00005023864 ENSMZEG00005023863 ENSMZEG00005023862 SMARCA4 (ENSMZEG00005023861) Pomacentridae ANCESTRAL SPECIES 8 ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000181262 ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000181262 ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Amphiprion ANCESTRAL SPECIES ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.b.a ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000181262 ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT01090000261423 ENSGT00390000010768 ENSGT00940000158046.a.b Clown anemonefish MODERN SPECIES 2551 ENSAOCG00000017107 rnf11a (ENSAOCG00000001185) HMOX1 (ENSAOCG00000017130) ENSAOCG00000017146 ENSAOCG00000017161 NEU3 (ENSAOCG00000017168) #22 Orange clownfish MODERN SPECIES 17 ENSAPEG00000023513 ENSAPEG00000023510 ENSAPEG00000023499 PLPPR2 (ENSAPEG00000023488) elof1 (ENSAPEG00000023438) pld6 (ENSAPEG00000023430) RAB3D (ENSAPEG00000023416) tspan34 (ENSAPEG00000023403) dand5 (ENSAPEG00000023394) NFIX (ENSAPEG00000023351) rnf11a (ENSAPEG00000023334) HMOX1 (ENSAPEG00000023325) ENSAPEG00000023313 ENSAPEG00000023300 ENSAPEG00000023267 NEU3 (ENSAPEG00000023257) #22 ENSAPEG00000023251 ENSAPEG00000023241 fdx2 (ENSAPEG00000023232) s1pr5b (ENSAPEG00000023229) keap1b (ENSAPEG00000023223) ENSAPEG00000023218 CDKN2D (ENSAPEG00000023215) ap1m2 (ENSAPEG00000023204) ENSAPEG00000023188 SMARCA4 (ENSAPEG00000023108) atg4da (ENSAPEG00000023035) ENSAPEG00000023018 MAST1 (ENSAPEG00000022973) ENSAPEG00000022961 rnaseh2a (ENSAPEG00000022937) Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 3701 NEU3 (ENSAPOG00000021328) #22 Spiny chromis MODERN SPECIES 88 ENSAPOG00000005041 dand5 (ENSAPOG00000004996) NFIX (ENSAPOG00000004937) rnf11a (ENSAPOG00000004817) HMOX1 (ENSAPOG00000004803) ENSAPOG00000004786 ENSAPOG00000004766 ENSAPOG00000004745 #22 ENSAPOG00000004728 zglp1 (ENSAPOG00000004713) fdx2 (ENSAPOG00000004692) s1pr5b (ENSAPOG00000004684) keap1b (ENSAPOG00000004671) ENSAPOG00000000116 CDKN2D (ENSAPOG00000004642) ap1m2 (ENSAPOG00000004630) ENSAPOG00000004583 SMARCA4 (ENSAPOG00000004542) atg4da (ENSAPOG00000004393) atg4da (ENSAPOG00000004347) MAST1 (ENSAPOG00000004190) rnaseh2a (ENSAPOG00000004101) SOX10 (ENSAPOG00000004067) Bicolor damselfish MODERN SPECIES 239 ENSSPAG00000012010 ENSSPAG00000012018 ENSSPAG00000012021 ENSSPAG00000012037 PLPPR2 (ENSSPAG00000012085) elof1 (ENSSPAG00000012103) pld6 (ENSSPAG00000012116) ENSSPAG00000012133 tspan34 (ENSSPAG00000012150) dand5 (ENSSPAG00000012165) NFIX (ENSSPAG00000012179) rnf11a (ENSSPAG00000012240) HMOX1 (ENSSPAG00000012255) ENSSPAG00000012292 ENSSPAG00000012330 NEU3 (ENSSPAG00000012338) #22 ENSSPAG00000012346 ENSSPAG00000012355 ENSSPAG00000012365 zglp1 (ENSSPAG00000012373) fdx2 (ENSSPAG00000012392) s1pr5b (ENSSPAG00000012405) keap1b (ENSSPAG00000012410) ENSSPAG00000012424 CDKN2D (ENSSPAG00000012438) ap1m2 (ENSSPAG00000012447) ENSSPAG00000012489 SMARCA4 (ENSSPAG00000012533) atg4da (ENSSPAG00000012672) MAST1 (ENSSPAG00000012704) ENSSPAG00000012759 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00390000009016 ENSGT00940000178623 ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Eupercaria ANCESTRAL SPECIES ENSGT00950000182944.A.b.d #22 Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00940000166223.b.b.b ENSGT00390000009016 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c.d #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00940000166223.b.b.a.b.a ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.c.d #22 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a European seabass MODERN SPECIES 20 ENSDLAG00005034675 ENSDLAG00005007949 ENSDLAG00005007954 ENSDLAG00005033110 ENSDLAG00005029455 ENSDLAG00005007991 ENSDLAG00005008025 ENSDLAG00005021936 ENSDLAG00005008056 ENSDLAG00005030170 ENSDLAG00005008075 ENSDLAG00005031386 ENSDLAG00005008204 ENSDLAG00005032780 ENSDLAG00005008225 #22 ENSDLAG00005008231 #22 ENSDLAG00005008241 ENSDLAG00005029476 s1pr5b (ENSDLAG00005035010) keap1b (ENSDLAG00005008271) ENSDLAG00005008311 ap1m2 (ENSDLAG00005008335) ENSDLAG00005008870 ENSDLAG00005009156 ENSDLAG00005009447 ENSDLAG00005009485 ENSDLAG00005010262 ENSDLAG00005010273 ENSDLAG00005010276 ENSDLAG00005010277 ENSDLAG00005010287 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000178623 ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.d ENSGT00940000181262 ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Carangaria ANCESTRAL SPECIES ENSGT00940000166223.b.b.b.a ENSGT00390000009016 ENSGT00940000166223.b.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b.f ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Carangaria_A ANCESTRAL SPECIES 14 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.b.a ENSGT00940000166223.b.b.b.b ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b.f ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Seriola DUPLICATION Seriola ANCESTRAL SPECIES 29 ENSGT00390000009016 ENSGT00940000178623 ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.j #22 ENSGT00950000182944.A.b.d.i #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b.f ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a Greater amberjack MODERN SPECIES 214 ENSSDUG00000000196 ENSSDUG00000000165 ENSSDUG00000023343 PLPPR2 (ENSSDUG00000023337) elof1 (ENSSDUG00000023329) pld6 (ENSSDUG00000023326) RAB3D (ENSSDUG00000023322) tspan34 (ENSSDUG00000023318) dand5 (ENSSDUG00000023316) NFIX (ENSSDUG00000023300) rnf11a (ENSSDUG00000023294) HMOX1 (ENSSDUG00000023292) ENSSDUG00000023284 ENSSDUG00000023281 NEU3 (ENSSDUG00000023279) #22 NEU3 (ENSSDUG00000023278) #22 ENSSDUG00000023275 ENSSDUG00000023273 fdx2 (ENSSDUG00000023270) s1pr5b (ENSSDUG00000023268) keap1b (ENSSDUG00000023265) ENSSDUG00000023263 CDKN2D (ENSSDUG00000023261) ap1m2 (ENSSDUG00000023256) Yellowtail amberjack MODERN SPECIES 2982 NFIX (ENSSLDG00000023509) rnf11a (ENSSLDG00000023520) HMOX1 (ENSSLDG00000023531) ENSSLDG00000023542 ENSSLDG00000023552 NEU3 (ENSSLDG00000023560) #22 NEU3 (ENSSLDG00000023565) #22 ENSSLDG00000023572 ENSSLDG00000023581 fdx2 (ENSSLDG00000023600) s1pr5b (ENSSLDG00000023617) keap1b (ENSSLDG00000023620) ENSSLDG00000023625 CDKN2D (ENSSLDG00000023627) ap1m2 (ENSSLDG00000023631) ENSSLDG00000023644 SMARCA4 (ENSSLDG00000023663) atg4da (ENSSLDG00000023718) MAST1 (ENSSLDG00000023742) rnaseh2a (ENSSLDG00000023766) SOX10 (ENSSLDG00000023781) ENSSLDG00000023789 Seriola ANCESTRAL SPECIES 29 ENSGT00940000166223.b.b.b.b ENSGT00390000009016 ENSGT00940000178623 ENSGT00940000173081 ENSGT00940000158145.a ENSGT00390000000053.a ENSGT00390000004368 ENSGT00940000157552.s.a ENSGT00940000164506.b.a ENSGT00530000063926.b ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00940000163721 ENSGT00390000017673.b.k ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00950000182944.A.b.d.j #22 ENSGT00950000182944.A.b.d.i #22 ENSGT00940000157140.b.b.a ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000159801.B ENSGT00940000159089 ENSGT00940000154819.a.b.c.b.d ENSGT00940000156887.b.f ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b Greater amberjack MODERN SPECIES 214 ENSSDUG00000000216 ENSSDUG00000000196 ENSSDUG00000000165 ENSSDUG00000023343 PLPPR2 (ENSSDUG00000023337) elof1 (ENSSDUG00000023329) pld6 (ENSSDUG00000023326) RAB3D (ENSSDUG00000023322) tspan34 (ENSSDUG00000023318) dand5 (ENSSDUG00000023316) NFIX (ENSSDUG00000023300) rnf11a (ENSSDUG00000023294) HMOX1 (ENSSDUG00000023292) ENSSDUG00000023284 ENSSDUG00000023281 NEU3 (ENSSDUG00000023279) #22 NEU3 (ENSSDUG00000023278) #22 ENSSDUG00000023275 ENSSDUG00000023273 fdx2 (ENSSDUG00000023270) s1pr5b (ENSSDUG00000023268) keap1b (ENSSDUG00000023265) ENSSDUG00000023263 CDKN2D (ENSSDUG00000023261) ap1m2 (ENSSDUG00000023256) Yellowtail amberjack MODERN SPECIES 2982 NFIX (ENSSLDG00000023509) rnf11a (ENSSLDG00000023520) HMOX1 (ENSSLDG00000023531) ENSSLDG00000023542 ENSSLDG00000023552 NEU3 (ENSSLDG00000023560) #22 NEU3 (ENSSLDG00000023565) #22 ENSSLDG00000023572 ENSSLDG00000023581 fdx2 (ENSSLDG00000023600) s1pr5b (ENSSLDG00000023617) keap1b (ENSSLDG00000023620) ENSSLDG00000023625 CDKN2D (ENSSLDG00000023627) ap1m2 (ENSSLDG00000023631) ENSSLDG00000023644 SMARCA4 (ENSSLDG00000023663) atg4da (ENSSLDG00000023718) MAST1 (ENSSLDG00000023742) rnaseh2a (ENSSLDG00000023766) SOX10 (ENSSLDG00000023781) Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 113 ENSLCAG00010025188 ENSLCAG00010025191 PLPPR2 (ENSLCAG00010025196) elof1 (ENSLCAG00010025204) pld6 (ENSLCAG00010025218) RAB3D (ENSLCAG00010025222) tspan34 (ENSLCAG00010025227) dand5 (ENSLCAG00010025230) NFIX (ENSLCAG00010025252) rnf11a (ENSLCAG00010025300) HMOX1 (ENSLCAG00010025306) ENSLCAG00010025315 ENSLCAG00010025320 ENSLCAG00010025324 #22 ENSLCAG00010025325 #22 ENSLCAG00010025327 #22 ENSLCAG00010025331 #22 ENSLCAG00010025333 ENSLCAG00010025336 ENSLCAG00010025338 fdx2 (ENSLCAG00010025344) s1pr5b (ENSLCAG00010025347) keap1b (ENSLCAG00010025348) ENSLCAG00010025351 CDKN2D (ENSLCAG00010025359) ap1m2 (ENSLCAG00010025411) ENSLCAG00010025594 SMARCA4 (ENSLCAG00010025736) atg4da (ENSLCAG00010025792) MAST1 (ENSLCAG00010025816) rnaseh2a (ENSLCAG00010025845) Barramundi perch MODERN SPECIES 1158 ENSLCAG00010008874 #22 ENSLCAG00010008880 #22 ENSLCAG00010008886 #22 Barramundi perch MODERN SPECIES 113 ENSLCAG00010025183 ENSLCAG00010025186 ENSLCAG00010025188 ENSLCAG00010025191 PLPPR2 (ENSLCAG00010025196) elof1 (ENSLCAG00010025204) pld6 (ENSLCAG00010025218) RAB3D (ENSLCAG00010025222) tspan34 (ENSLCAG00010025227) dand5 (ENSLCAG00010025230) NFIX (ENSLCAG00010025252) rnf11a (ENSLCAG00010025300) HMOX1 (ENSLCAG00010025306) ENSLCAG00010025315 ENSLCAG00010025320 ENSLCAG00010025324 #22 ENSLCAG00010025325 #22 ENSLCAG00010025327 #22 ENSLCAG00010025331 #22 ENSLCAG00010025333 ENSLCAG00010025336 ENSLCAG00010025338 fdx2 (ENSLCAG00010025344) s1pr5b (ENSLCAG00010025347) keap1b (ENSLCAG00010025348) ENSLCAG00010025351 CDKN2D (ENSLCAG00010025359) ap1m2 (ENSLCAG00010025411) ENSLCAG00010025594 SMARCA4 (ENSLCAG00010025736) atg4da (ENSLCAG00010025792) Barramundi perch MODERN SPECIES 1663 ENSLCAG00010003453 #22 Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 113 ENSLCAG00010025191 PLPPR2 (ENSLCAG00010025196) elof1 (ENSLCAG00010025204) pld6 (ENSLCAG00010025218) RAB3D (ENSLCAG00010025222) tspan34 (ENSLCAG00010025227) dand5 (ENSLCAG00010025230) NFIX (ENSLCAG00010025252) rnf11a (ENSLCAG00010025300) HMOX1 (ENSLCAG00010025306) ENSLCAG00010025315 ENSLCAG00010025320 ENSLCAG00010025324 #22 ENSLCAG00010025325 #22 ENSLCAG00010025327 #22 ENSLCAG00010025331 #22 ENSLCAG00010025333 ENSLCAG00010025336 ENSLCAG00010025338 fdx2 (ENSLCAG00010025344) s1pr5b (ENSLCAG00010025347) keap1b (ENSLCAG00010025348) ENSLCAG00010025351 CDKN2D (ENSLCAG00010025359) ap1m2 (ENSLCAG00010025411) ENSLCAG00010025594 SMARCA4 (ENSLCAG00010025736) atg4da (ENSLCAG00010025792) MAST1 (ENSLCAG00010025816) rnaseh2a (ENSLCAG00010025845) SOX10 (ENSLCAG00010025851) Barramundi perch MODERN SPECIES 1158 ENSLCAG00010008874 #22 ENSLCAG00010008880 #22 ENSLCAG00010008886 #22 Barramundi perch MODERN SPECIES 1158 ENSLCAG00010008874 #22 ENSLCAG00010008880 #22 ENSLCAG00010008886 #22 Barramundi perch MODERN SPECIES 113 ENSLCAG00010025186 ENSLCAG00010025188 ENSLCAG00010025191 PLPPR2 (ENSLCAG00010025196) elof1 (ENSLCAG00010025204) pld6 (ENSLCAG00010025218) RAB3D (ENSLCAG00010025222) tspan34 (ENSLCAG00010025227) dand5 (ENSLCAG00010025230) NFIX (ENSLCAG00010025252) rnf11a (ENSLCAG00010025300) HMOX1 (ENSLCAG00010025306) ENSLCAG00010025315 ENSLCAG00010025320 ENSLCAG00010025324 #22 ENSLCAG00010025325 #22 ENSLCAG00010025327 #22 ENSLCAG00010025331 #22 ENSLCAG00010025333 ENSLCAG00010025336 ENSLCAG00010025338 fdx2 (ENSLCAG00010025344) s1pr5b (ENSLCAG00010025347) keap1b (ENSLCAG00010025348) ENSLCAG00010025351 CDKN2D (ENSLCAG00010025359) ap1m2 (ENSLCAG00010025411) ENSLCAG00010025594 SMARCA4 (ENSLCAG00010025736) atg4da (ENSLCAG00010025792) MAST1 (ENSLCAG00010025816) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 174 ENSGT00940000168097 ENSGT00940000158785 ENSGT00950000182887.C.a.b ENSGT01100000263522.B.a ENSGT01100000263522.B.b ENSGT00950000183048.b.a.c.a ENSGT00950000183023.A ENSGT00950000183023.B.n.b ENSGT00950000183023.B.o ENSGT00940000158353 ENSGT00390000006450 ENSGT00940000163239 ENSGT00940000166571 ENSGT00390000016048 ENSGT00440000038181 ENSGT00950000182944.A.c #22 ENSGT00390000015701 ENSGT00650000094922 ENSGT00940000160131.g ENSGT00550000074980 ENSGT00390000012905.d ENSGT00930000151482 ENSGT00390000017457 ENSGT00940000155414 ENSGT00550000075050 ENSGT00390000012719.a.a.b ENSGT00940000158514 ENSGT00940000161226.b ENSGT00940000156831.b ENSGT00510000047471 ENSGT00390000002172.A.a Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 18 AXL (ENSSFOG00015007363) ENSSFOG00015007375 b9d2 (ENSSFOG00015007392) TGFB1 (ENSSFOG00015032951) ENSSFOG00015026743 ppp5c (ENSSFOG00015007455) arrb1 (ENSSFOG00015007507) ENSSFOG00015028328 ENSSFOG00015030026 pgm2l1 (ENSSFOG00015007645) lipt2 (ENSSFOG00015027760) pold3 (ENSSFOG00015007720) chrdl2 (ENSSFOG00015007816) XRRA1 (ENSSFOG00015028864) NEU3 (ENSSFOG00015007899) #22 ENSSFOG00015031770 #22 wdr73 (ENSSFOG00015007923) defbl2 (ENSSFOG00015007932) abcg1 (ENSSFOG00015007941) DDX10 (ENSSFOG00015007982) ENSSFOG00015025464 si:dkey-183i3.5 (ENSSFOG00015008012) mybbp1a (ENSSFOG00015008056) eif4h (ENSSFOG00015008101) rfc2 (ENSSFOG00015008136) zgc:171740 (ENSSFOG00015027109) fkbp6 (ENSSFOG00015008196) FZD9 (ENSSFOG00015031095) mks1 (ENSSFOG00015008232) bcl7bb (ENSSFOG00015008252) tbl2 (ENSSFOG00015004684) Asian bonytongue MODERN SPECIES 18 ENSSFOG00015007116 AXL (ENSSFOG00015007363) ENSSFOG00015007375 b9d2 (ENSSFOG00015007392) TGFB1 (ENSSFOG00015032951) ENSSFOG00015026743 ppp5c (ENSSFOG00015007455) arrb1 (ENSSFOG00015007507) ENSSFOG00015028328 ENSSFOG00015030026 pgm2l1 (ENSSFOG00015007645) lipt2 (ENSSFOG00015027760) pold3 (ENSSFOG00015007720) chrdl2 (ENSSFOG00015007816) XRRA1 (ENSSFOG00015028864) NEU3 (ENSSFOG00015007899) #22 ENSSFOG00015031770 #22 wdr73 (ENSSFOG00015007923) defbl2 (ENSSFOG00015007932) abcg1 (ENSSFOG00015007941) DDX10 (ENSSFOG00015007982) ENSSFOG00015025464 si:dkey-183i3.5 (ENSSFOG00015008012) mybbp1a (ENSSFOG00015008056) eif4h (ENSSFOG00015008101) rfc2 (ENSSFOG00015008136) zgc:171740 (ENSSFOG00015027109) fkbp6 (ENSSFOG00015008196) FZD9 (ENSSFOG00015031095) mks1 (ENSSFOG00015008232) bcl7bb (ENSSFOG00015008252) P. kingsleyae MODERN SPECIES 63 ENSPKIG00000017829 cbr1l (ENSPKIG00000017867) ppp5c (ENSPKIG00000017925) ENSPKIG00000018068 arrb1 (ENSPKIG00000018240) or64f1 (ENSPKIG00000018289) ENSPKIG00000018314 ENSPKIG00000018327 ENSPKIG00000018354 pgm2l1 (ENSPKIG00000018415) lipt2 (ENSPKIG00000018486) pold3 (ENSPKIG00000018505) chrdl2 (ENSPKIG00000018535) XRRA1 (ENSPKIG00000018577) spcs2 (ENSPKIG00000018609) NEU3 (ENSPKIG00000018624) #22 wdr73 (ENSPKIG00000018640) Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000182944.A.d #22 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 18 ENSPKIG00000013199 PGS1 (ENSPKIG00000013232) socs3b (ENSPKIG00000013300) TMEM235 (ENSPKIG00000013342) birc5a (ENSPKIG00000013378) FAAP100 (ENSPKIG00000013401) fscn2b (ENSPKIG00000013426) BAHCC1 (ENSPKIG00000013487) SLC38A10 (ENSPKIG00000013606) ndufaf8 (ENSPKIG00000013710) TEPSIN (ENSPKIG00000013741) si:dkey-21c1.1 (ENSPKIG00000013789) ENSPKIG00000013855 HID1 (ENSPKIG00000013909) ENSPKIG00000014005 NEU3 (ENSPKIG00000014067) #22 ENSPKIG00000014094 NEU3 (ENSPKIG00000014131) #22 USH1G (ENSPKIG00000014218) FADS6 (ENSPKIG00000014246) ENSPKIG00000014273 zgc:112148 (ENSPKIG00000014299) ENSPKIG00000014313 exoc7 (ENSPKIG00000014329) galr2a (ENSPKIG00000014369) KCNJ16 (ENSPKIG00000014415) kcnj2a (ENSPKIG00000014425) map2k6 (ENSPKIG00000014459) ldb1a (ENSPKIG00000014537) HPS6 (ENSPKIG00000014625) armh3 (ENSPKIG00000014676) P. kingsleyae MODERN SPECIES 18 socs3b (ENSPKIG00000013300) TMEM235 (ENSPKIG00000013342) birc5a (ENSPKIG00000013378) FAAP100 (ENSPKIG00000013401) fscn2b (ENSPKIG00000013426) BAHCC1 (ENSPKIG00000013487) SLC38A10 (ENSPKIG00000013606) ndufaf8 (ENSPKIG00000013710) TEPSIN (ENSPKIG00000013741) si:dkey-21c1.1 (ENSPKIG00000013789) ENSPKIG00000013855 HID1 (ENSPKIG00000013909) ENSPKIG00000014005 NEU3 (ENSPKIG00000014067) #22 ENSPKIG00000014094 NEU3 (ENSPKIG00000014131) #22 USH1G (ENSPKIG00000014218) FADS6 (ENSPKIG00000014246) ENSPKIG00000014273 zgc:112148 (ENSPKIG00000014299) ENSPKIG00000014313 exoc7 (ENSPKIG00000014329) galr2a (ENSPKIG00000014369) KCNJ16 (ENSPKIG00000014415) kcnj2a (ENSPKIG00000014425) map2k6 (ENSPKIG00000014459) ldb1a (ENSPKIG00000014537) HPS6 (ENSPKIG00000014625) armh3 (ENSPKIG00000014676) KCNIP2 (ENSPKIG00000014808) ENSPKIG00000014871 Spotted gar MODERN SPECIES 669 ENSLOCG00000017449 ENSLOCG00000002371 ENSLOCG00000017448 ENSLOCG00000017447 ENSLOCG00000017446 ENSLOCG00000017445 ENSLOCG00000002352 ENSLOCG00000017444 pgm2l1 (ENSLOCG00000002326) lipt2 (ENSLOCG00000002316) pold3 (ENSLOCG00000002298) chrdl2 (ENSLOCG00000002265) rnf169 (ENSLOCG00000002250) XRRA1 (ENSLOCG00000002223) spcs2 (ENSLOCG00000002208) neu3.1 (ENSLOCG00000002179) #22 wdr73 (ENSLOCG00000002160) ENSLOCG00000002146 abcg1 (ENSLOCG00000002133) si:dkey-183i3.5 (ENSLOCG00000002112) DDX10 (ENSLOCG00000002074) ENSLOCG00000002056 poglut3 (ENSLOCG00000002033) ENSLOCG00000002020 pomp (ENSLOCG00000001993) ccdc82 (ENSLOCG00000001946) SPAG16 (ENSLOCG00000017443) hgd (ENSLOCG00000001925) arxa (ENSLOCG00000001912) pola1 (ENSLOCG00000001836) pcyt1bb (ENSLOCG00000001818) Reedfish DUPLICATION Reedfish MODERN SPECIES 12 ENSECRG00000005294 ENSECRG00000005298 ENSECRG00000005303 ENSECRG00000005311 ENSECRG00000005314 ENSECRG00000005318 ENSECRG00000005322 pgm2l1 (ENSECRG00000005330) ENSECRG00000005345 lipt2 (ENSECRG00000005355) ENSECRG00000005360 pold3 (ENSECRG00000005371) chrdl2 (ENSECRG00000005388) rnf169 (ENSECRG00000005405) spcs2 (ENSECRG00000005421) NEU3 (ENSECRG00000005456) #22 ENSECRG00000005465 NEU3 (ENSECRG00000005476) #22 wdr73 (ENSECRG00000005488) ENSECRG00000005497 si:dkey-183i3.5 (ENSECRG00000005506) C11orf87 (ENSECRG00000005520) DDX10 (ENSECRG00000005531) poglut3 (ENSECRG00000005548) ENSECRG00000005559 pomp (ENSECRG00000005575) ENSECRG00000005759 ENSECRG00000005765 ndufb4 (ENSECRG00000005773) hgd (ENSECRG00000005792) arxa (ENSECRG00000005823) Reedfish MODERN SPECIES 12 ENSECRG00000005303 ENSECRG00000005311 ENSECRG00000005314 ENSECRG00000005318 ENSECRG00000005322 pgm2l1 (ENSECRG00000005330) ENSECRG00000005345 lipt2 (ENSECRG00000005355) ENSECRG00000005360 pold3 (ENSECRG00000005371) chrdl2 (ENSECRG00000005388) rnf169 (ENSECRG00000005405) spcs2 (ENSECRG00000005421) NEU3 (ENSECRG00000005456) #22 ENSECRG00000005465 NEU3 (ENSECRG00000005476) #22 wdr73 (ENSECRG00000005488) ENSECRG00000005497 si:dkey-183i3.5 (ENSECRG00000005506) C11orf87 (ENSECRG00000005520) DDX10 (ENSECRG00000005531) poglut3 (ENSECRG00000005548) ENSECRG00000005559 pomp (ENSECRG00000005575) ENSECRG00000005759 ENSECRG00000005765 ndufb4 (ENSECRG00000005773) hgd (ENSECRG00000005792) arxa (ENSECRG00000005823) pola1 (ENSECRG00000005843) pcyt1bb (ENSECRG00000005877) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1655 ENSCMIG00000012815 ripk4 (ENSCMIG00000012817) zgc:112083 (ENSCMIG00000012826) PRDM15 (ENSCMIG00000012832) atg101 (ENSCMIG00000012851) ZBTB21 (ENSCMIG00000012852) ENSCMIG00000012855 ENSCMIG00000012856 ENSCMIG00000012862 ENSCMIG00000012870 cfap298 (ENSCMIG00000012875) synj1 (ENSCMIG00000012961) ENSCMIG00000013229 paxbp1 (ENSCMIG00000013260) ENSCMIG00000013300 NEU3 (ENSCMIG00000013303) #22 ENSCMIG00000013307 #22 ENSCMIG00000013311 ENSCMIG00000013313 nup98 (ENSCMIG00000013320) ENSCMIG00000013323 Elephant shark MODERN SPECIES 1655 ripk4 (ENSCMIG00000012817) zgc:112083 (ENSCMIG00000012826) PRDM15 (ENSCMIG00000012832) atg101 (ENSCMIG00000012851) ZBTB21 (ENSCMIG00000012852) ENSCMIG00000012855 ENSCMIG00000012856 ENSCMIG00000012862 ENSCMIG00000012870 cfap298 (ENSCMIG00000012875) synj1 (ENSCMIG00000012961) ENSCMIG00000013229 paxbp1 (ENSCMIG00000013260) ENSCMIG00000013300 NEU3 (ENSCMIG00000013303) #22 ENSCMIG00000013307 #22 ENSCMIG00000013311 ENSCMIG00000013313 nup98 (ENSCMIG00000013320) ENSCMIG00000013323