Vertebrata ANCESTRAL SPECIES ENSGT00940000154958 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000154958 #22 Euteleostomi ANCESTRAL SPECIES 5 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000155345 ENSGT00390000012029 Sarcopterygii ANCESTRAL SPECIES 54 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00660000097267 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000166667 ENSGT00940000158602 ENSGT00390000006915.d ENSGT01080000257376.a.b.a.a ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000160772 Tetrapoda ANCESTRAL SPECIES 15 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000155345 ENSGT00390000012029 Amniota ANCESTRAL SPECIES 12 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Mammalia ANCESTRAL SPECIES 22 ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Theria ANCESTRAL SPECIES 13 ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Primates ANCESTRAL SPECIES 14 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.ib.a ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.ib.a.a.b ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Catarrhini ANCESTRAL SPECIES 17 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Hominoidea ANCESTRAL SPECIES 18 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000182901.a.a.a.b.b ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Hominidae ANCESTRAL SPECIES 19 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000182901.a.a.a.b.b ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00940000164467.d.b.b.b #9 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885.k #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s.a ##16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a.b ##21 ENSGT00910000147214 #20 ENSGT00940000154556.tb.a.a.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000182901.a.a.a.b.b ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00390000010721.a.a.a.b #33 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00940000164467.d.b.b.b #9 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885.k #12 ENSGT00390000004284 #13 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s.a ##16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a.b ##21 ENSGT00910000147214 #20 ENSGT00940000154556.tb.a.a.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00390000010721.a.a.a.b #33 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Pan ANCESTRAL SPECIES 17 ENSGT00940000154544.a #8 ENSGT00940000164467.d.b.b.b #9 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885.k #12 ENSGT00390000004284 #13 ENSGT00950000183091.A.b #15 ENSGT00390000018052.l #14 ENSGT00390000015405.s.b #16 ENSGT00390000015405.s.a ##16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556.tb.a.a.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00390000010721.a.a.a.b #33 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Chimpanzee MODERN SPECIES 14 ARHGAP25 (ENSPTRG00000012007) #7 PROKR1 (ENSPTRG00000051956) #8 ENSPTRG00000047822 #9 APLF (ENSPTRG00000012004) #10 FBXO48 (ENSPTRG00000030457) #11 PLEK (ENSPTRG00000012003) #12 CNRIP1 (ENSPTRG00000012002) #13 PNO1 (ENSPTRG00000011999) #14 ENSPTRG00000041941 #15 C1D (ENSPTRG00000023558) #16 ETAA1 (ENSPTRG00000011996) #17 MEIS1 (ENSPTRG00000011994) #18 SPRED2 (ENSPTRG00000011992) #19 ENSPTRG00000047998 #20 ENSPTRG00000011990 #21 RAB1A (ENSPTRG00000011989) #22 CEP68 (ENSPTRG00000011988) #23 SLC1A4 (ENSPTRG00000011985) #24 SERTAD2 (ENSPTRG00000030469) #25 ENSPTRG00000045952 #26 AFTPH (ENSPTRG00000011983) #27 LGALSL (ENSPTRG00000047293) #28 PELI1 (ENSPTRG00000023869) #29 VPS54 (ENSPTRG00000011978) #30 UGP2 (ENSPTRG00000011976) #31 ENSPTRG00000048626 #32 ENSPTRG00000046466 #33 MDH1 (ENSPTRG00000011974) #34 WDPCP (ENSPTRG00000024270) #35 OTX1 (ENSPTRG00000011972) #36 EHBP1 (ENSPTRG00000011969) #37 Bonobo MODERN SPECIES 14 ARHGAP25 (ENSPPAG00000035053) #7 PROKR1 (ENSPPAG00000042374) #8 ENSPPAG00000036471 ##9 APLF (ENSPPAG00000033703) #10 FBXO48 (ENSPPAG00000030285) #11 PLEK (ENSPPAG00000036621) #12 CNRIP1 (ENSPPAG00000036249) #13 PNO1 (ENSPPAG00000039314) #14 ENSPPAG00000032606 #15 ENSPPAG00000037847 ##16 ETAA1 (ENSPPAG00000034986) #17 ENSPPAG00000037169 #18 SPRED2 (ENSPPAG00000042240) #19 ENSPPAG00000026570 #20 ENSPPAG00000030634 #21 RAB1A (ENSPPAG00000030253) #22 CEP68 (ENSPPAG00000026445) #23 SLC1A4 (ENSPPAG00000041051) #24 SERTAD2 (ENSPPAG00000033136) #25 ENSPPAG00000031785 #26 AFTPH (ENSPPAG00000028223) #27 LGALSL (ENSPPAG00000039473) #28 PELI1 (ENSPPAG00000044117) #29 VPS54 (ENSPPAG00000028874) #30 UGP2 (ENSPPAG00000038898) #31 ENSPPAG00000032238 #33 MDH1 (ENSPPAG00000042469) #34 WDPCP (ENSPPAG00000032819) #35 OTX1 (ENSPPAG00000028464) #36 EHBP1 (ENSPPAG00000043965) #37 TMEM17 (ENSPPAG00000011687) Human MODERN SPECIES 11 BMP10 (ENSG00000163217) ARHGAP25 (ENSG00000163219) #7 PROKR1 (ENSG00000169618) #8 APLF (ENSG00000169621) #10 FBXO48 (ENSG00000204923) #11 PLEK (ENSG00000115956) #12 CNRIP1 (ENSG00000119865) #13 PPP3R1 (ENSG00000221823) PNO1 (ENSG00000115946) #14 DNAAF10 (ENSG00000243667) #15 C1D (ENSG00000197223) ##16 ETAA1 (ENSG00000143971) #17 MEIS1 (ENSG00000143995) #18 SPRED2 (ENSG00000198369) #19 ACTR2 (ENSG00000138071) ##21 RAB1A (ENSG00000138069) #22 CEP68 (ENSG00000011523) #23 SLC1A4 (ENSG00000115902) #24 SERTAD2 (ENSG00000179833) #25 AFTPH (ENSG00000119844) #27 LGALSL (ENSG00000119862) #28 PELI1 (ENSG00000197329) #29 VPS54 (ENSG00000143952) #30 UGP2 (ENSG00000169764) #31 MDH1 (ENSG00000014641) #34 WDPCP (ENSG00000143951) #35 OTX1 (ENSG00000115507) #36 EHBP1 (ENSG00000115504) #37 TMEM17 (ENSG00000186889) B3GNT2 (ENSG00000170340) COMMD1 (ENSG00000173163) Gorilla MODERN SPECIES 14 ENSGGOG00000041724 #9 FBXO48 (ENSGGOG00000007346) #11 PLEK (ENSGGOG00000026840) #12 ENSGGOG00000005831 ##12 CNRIP1 (ENSGGOG00000022874) #13 PPP3R1 (ENSGGOG00000039766) PNO1 (ENSGGOG00000009158) #14 DNAAF10 (ENSGGOG00000010285) #15 ENSGGOG00000023297 ENSGGOG00000025982 ##16 ETAA1 (ENSGGOG00000014411) #17 ENSGGOG00000005446 #18 SPRED2 (ENSGGOG00000007267) #19 ENSGGOG00000041600 #20 ENSGGOG00000008505 #21 RAB1A (ENSGGOG00000026603) #22 CEP68 (ENSGGOG00000005826) #23 SLC1A4 (ENSGGOG00000011211) #24 AFTPH (ENSGGOG00000008449) #27 ENSGGOG00000023155 #26 LGALSL (ENSGGOG00000006386) #28 ENSGGOG00000022216 PELI1 (ENSGGOG00000013460) #29 VPS54 (ENSGGOG00000006294) #30 UGP2 (ENSGGOG00000006283) #31 ENSGGOG00000036456 #33 MDH1 (ENSGGOG00000007085) #34 WDPCP (ENSGGOG00000011930) #35 OTX1 (ENSGGOG00000015410) #36 EHBP1 (ENSGGOG00000034917) #37 ENSGGOG00000038261 Orangutan MODERN SPECIES 14 BMP10 (ENSPPYG00000012345) ARHGAP25 (ENSPPYG00000012346) #7 PROKR1 (ENSPPYG00000012347) #8 APLF (ENSPPYG00000012348) #10 FBXO48 (ENSPPYG00000012736) #11 PLEK (ENSPPYG00000040535) #12 CNRIP1 (ENSPPYG00000012351) #13 PPP3R1 (ENSPPYG00000031425) PNO1 (ENSPPYG00000033861) #14 DNAAF10 (ENSPPYG00000012352) #15 C1D (ENSPPYG00000012354) #16 ETAA1 (ENSPPYG00000012355) #17 ENSPPYG00000012356 #18 SPRED2 (ENSPPYG00000012358) #19 ACTR2 (ENSPPYG00000012359) #21 RAB1A (ENSPPYG00000012360) #22 CEP68 (ENSPPYG00000012361) #23 SLC1A4 (ENSPPYG00000041756) #24 SERTAD2 (ENSPPYG00000035823) #25 AFTPH (ENSPPYG00000012364) #27 ENSPPYG00000012365 #26 LGALSL (ENSPPYG00000012366) #28 PELI1 (ENSPPYG00000012369) #29 VPS54 (ENSPPYG00000012370) #30 UGP2 (ENSPPYG00000012371) #31 MDH1 (ENSPPYG00000012373) #34 WDPCP (ENSPPYG00000012374) #35 OTX1 (ENSPPYG00000012376) #36 ENSPPYG00000030010 EHBP1 (ENSPPYG00000012377) #37 TMEM17 (ENSPPYG00000012378) Gibbon MODERN SPECIES 4 ARHGAP25 (ENSNLEG00000010028) #7 PROKR1 (ENSNLEG00000010024) #8 APLF (ENSNLEG00000010019) #10 FBXO48 (ENSNLEG00000010016) #11 PLEK (ENSNLEG00000010002) #12 CNRIP1 (ENSNLEG00000009999) #13 PPP3R1 (ENSNLEG00000026538) PNO1 (ENSNLEG00000034233) #14 DNAAF10 (ENSNLEG00000030882) #15 ENSNLEG00000032919 #16 ETAA1 (ENSNLEG00000009972) #17 ENSNLEG00000009963 #18 ENSNLEG00000027615 SPRED2 (ENSNLEG00000009959) #19 ACTR2 (ENSNLEG00000009948) #21 RAB1A (ENSNLEG00000009944) #22 ENSNLEG00000009939 #23 SLC1A4 (ENSNLEG00000009927) #24 SERTAD2 (ENSNLEG00000029151) #25 ENSNLEG00000009923 #26 AFTPH (ENSNLEG00000009902) #27 LGALSL (ENSNLEG00000031680) #28 ENSNLEG00000028443 PELI1 (ENSNLEG00000009891) #29 VPS54 (ENSNLEG00000009859) #30 UGP2 (ENSNLEG00000031494) #31 ENSNLEG00000035245 MDH1 (ENSNLEG00000009823) #34 WDPCP (ENSNLEG00000009810) #35 OTX1 (ENSNLEG00000009808) #36 ENSNLEG00000027460 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.mb ##22 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.mb ##22 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000010283.ab.a ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Macaca ANCESTRAL SPECIES 17 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000010283.ab.a ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Macaca_a DUPLICATION Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s.c #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Rhesus MODERN SPECIES 4 ARHGAP25 (ENSMMUG00000015052) #7 PROKR1 (ENSMMUG00000052056) #8 APLF (ENSMMUG00000007552) #10 FBXO48 (ENSMMUG00000060845) #11 PLEK (ENSMMUG00000009195) #12 CNRIP1 (ENSMMUG00000046992) #13 PPP3R1 (ENSMMUG00000046264) PNO1 (ENSMMUG00000017461) #14 DNAAF10 (ENSMMUG00000017460) #15 C1D (ENSMMUG00000017209) #16 ETAA1 (ENSMMUG00000062156) #17 ENSMMUG00000049443 MEIS1 (ENSMMUG00000011216) #18 SPRED2 (ENSMMUG00000044784) #19 ACTR2 (ENSMMUG00000002263) #21 RAB1A (ENSMMUG00000021721) #22 CEP68 (ENSMMUG00000017019) #23 SLC1A4 (ENSMMUG00000010279) #24 SERTAD2 (ENSMMUG00000047067) #25 ENSMMUG00000014862 AFTPH (ENSMMUG00000006503) #27 ENSMMUG00000006504 #26 LGALSL (ENSMMUG00000064711) #28 PELI1 (ENSMMUG00000059267) #29 VPS54 (ENSMMUG00000008772) #30 UGP2 (ENSMMUG00000008770) #31 ENSMMUG00000060943 MDH1 (ENSMMUG00000006163) #34 WDPCP (ENSMMUG00000003979) #35 ENSMMUG00000030822 OTX1 (ENSMMUG00000051405) #36 Crab-eating macaque MODERN SPECIES 4 APLF (ENSMFAG00000045051) #10 FBXO48 (ENSMFAG00000038551) #11 PLEK (ENSMFAG00000054603) #12 CNRIP1 (ENSMFAG00000035167) #13 PPP3R1 (ENSMFAG00000031560) PNO1 (ENSMFAG00000043544) #14 ENSMFAG00000064848 DNAAF10 (ENSMFAG00000042360) #15 ENSMFAG00000034261 #16 ENSMFAG00000056299 ETAA1 (ENSMFAG00000039723) #17 MEIS1 (ENSMFAG00000042877) #18 SPRED2 (ENSMFAG00000031151) #19 ACTR2 (ENSMFAG00000044097) #21 ENSMFAG00000061807 ENSMFAG00000046246 #22 ENSMFAG00000064674 ENSMFAG00000049291 CEP68 (ENSMFAG00000041409) #23 SLC1A4 (ENSMFAG00000003847) #24 ENSMFAG00000053049 ENSMFAG00000062833 SERTAD2 (ENSMFAG00000037664) #25 ENSMFAG00000061518 ENSMFAG00000002213 AFTPH (ENSMFAG00000041331) #27 ENSMFAG00000035379 #26 ENSMFAG00000031922 #28 ENSMFAG00000054126 PELI1 (ENSMFAG00000045683) #29 VPS54 (ENSMFAG00000042525) #30 Macaca_a ANCESTRAL SPECIES ENSGT00940000154958.lb.a.b #22 Crab-eating macaque MODERN SPECIES 19 SFR1 (ENSMFAG00000033346) CFAP43 (ENSMFAG00000043638) GSTO1 (ENSMFAG00000033599) ENSMFAG00000061086 GSTO2 (ENSMFAG00000050681) ITPRIP (ENSMFAG00000057374) CFAP58 (ENSMFAG00000035977) SORCS3 (ENSMFAG00000044111) ENSMFAG00000050436 ENSMFAG00000046202 SORCS1 (ENSMFAG00000042566) ENSMFAG00000056460 ENSMFAG00000058920 ENSMFAG00000058560 ENSMFAG00000011968 ENSMFAG00000055089 #22 ENSMFAG00000031866 ENSMFAG00000051095 XPNPEP1 (ENSMFAG00000030034) ADD3 (ENSMFAG00000031457) ENSMFAG00000056864 MXI1 (ENSMFAG00000030475) ENSMFAG00000002433 ENSMFAG00000059019 ENSMFAG00000065587 DUSP5 (ENSMFAG00000002031) ENSMFAG00000063112 SMC3 (ENSMFAG00000003098) RBM20 (ENSMFAG00000036795) ENSMFAG00000063286 ENSMFAG00000049620 Pig-tailed macaque MODERN SPECIES 90 ENSMNEG00000028414 #22 ENSMNEG00000035210 XPNPEP1 (ENSMNEG00000029393) ADD3 (ENSMNEG00000028760) MXI1 (ENSMNEG00000034671) ENSMNEG00000042963 ENSMNEG00000038014 DUSP5 (ENSMNEG00000033790) SMC3 (ENSMNEG00000001042) RBM20 (ENSMNEG00000030297) PDCD4 (ENSMNEG00000043104) BBIP1 (ENSMNEG00000041769) SHOC2 (ENSMNEG00000039245) ADRA2A (ENSMNEG00000006398) ENSMNEG00000038669 GPAM (ENSMNEG00000041070) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000010283.ab.a ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Olive baboon MODERN SPECIES 5 ARHGAP25 (ENSPANG00000010754) #7 PROKR1 (ENSPANG00000048102) #8 APLF (ENSPANG00000010484) #10 FBXO48 (ENSPANG00000019905) #11 PLEK (ENSPANG00000005755) #12 CNRIP1 (ENSPANG00000029881) #13 PPP3R1 (ENSPANG00000024026) ENSPANG00000031684 #14 DNAAF10 (ENSPANG00000011915) #15 C1D (ENSPANG00000002886) #16 ETAA1 (ENSPANG00000007449) #17 MEIS1 (ENSPANG00000008059) #18 ENSPANG00000049032 SPRED2 (ENSPANG00000015698) #19 ACTR2 (ENSPANG00000007073) #21 RAB1A (ENSPANG00000010485) #22 CEP68 (ENSPANG00000009710) #23 SLC1A4 (ENSPANG00000025917) #24 SERTAD2 (ENSPANG00000021214) #25 ENSPANG00000033862 #26 AFTPH (ENSPANG00000019355) #27 LGALSL (ENSPANG00000007113) #28 PELI1 (ENSPANG00000008630) #29 VPS54 (ENSPANG00000022299) #30 UGP2 (ENSPANG00000020689) #31 MDH1 (ENSPANG00000014437) #34 ENSPANG00000006332 ENSPANG00000044221 WDPCP (ENSPANG00000019775) #35 OTX1 (ENSPANG00000038245) #36 EHBP1 (ENSPANG00000016912) #37 Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000010283.ab.a ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Drill MODERN SPECIES 924 ENSMLEG00000040103 ETAA1 (ENSMLEG00000044155) #17 MEIS1 (ENSMLEG00000034716) #18 ENSMLEG00000042632 SPRED2 (ENSMLEG00000038726) #19 ACTR2 (ENSMLEG00000038155) #21 RAB1A (ENSMLEG00000042535) #22 CEP68 (ENSMLEG00000035123) #23 SLC1A4 (ENSMLEG00000036589) #24 ENSMLEG00000029653 SERTAD2 (ENSMLEG00000023036) #25 ENSMLEG00000028092 #26 AFTPH (ENSMLEG00000030266) #27 LGALSL (ENSMLEG00000042260) #28 Sooty mangabey MODERN SPECIES 494 APLF (ENSCATG00000015227) #10 FBXO48 (ENSCATG00000006573) #11 PLEK (ENSCATG00000037750) #12 CNRIP1 (ENSCATG00000037632) #13 PPP3R1 (ENSCATG00000036183) PNO1 (ENSCATG00000018547) #14 DNAAF10 (ENSCATG00000028444) #15 C1D (ENSCATG00000045336) #16 ENSCATG00000033727 ETAA1 (ENSCATG00000036073) #17 MEIS1 (ENSCATG00000030958) #18 ENSCATG00000012177 ENSCATG00000045181 SPRED2 (ENSCATG00000034117) #19 ACTR2 (ENSCATG00000036025) #21 RAB1A (ENSCATG00000030853) #22 CEP68 (ENSCATG00000032378) #23 SLC1A4 (ENSCATG00000036187) #24 SERTAD2 (ENSCATG00000012102) #25 ENSCATG00000045350 #26 AFTPH (ENSCATG00000032038) #27 LGALSL (ENSCATG00000029852) #28 PELI1 (ENSCATG00000031456) #29 VPS54 (ENSCATG00000000035) #30 UGP2 (ENSCATG00000038117) #31 ENSCATG00000010001 MDH1 (ENSCATG00000030537) #34 WDPCP (ENSCATG00000043458) #35 OTX1 (ENSCATG00000031998) #36 EHBP1 (ENSCATG00000030805) #37 TMEM17 (ENSCATG00000038173) Rhinopithecus ANCESTRAL SPECIES 327 ENSGT00390000017767.b.a ENSGT00940000160181 ENSGT00940000155979 ENSGT00530000063712.a.b ENSGT00940000159266 ENSGT00550000074816.A.a ENSGT00940000156513 ENSGT00470000042500 ENSGT00390000015159.a.b ENSGT00950000183424 ENSGT00940000158432 ENSGT00910000146982 ENSGT00940000155678 ENSGT00940000154958.lb.a #22 ENSGT00390000012474 ENSGT00770000121715 ENSGT00940000161165 Golden snub-nosed monkey MODERN SPECIES 2939 CYRIA (ENSRROG00000031025) ENSRROG00000010610 MYCN (ENSRROG00000041638) ENSRROG00000031730 DDX1 (ENSRROG00000031167) ENSRROG00000031865 #22 NBAS (ENSRROG00000043471) ENSRROG00000035284 LRATD1 (ENSRROG00000010790) Black snub-nosed monkey MODERN SPECIES 374 ENSRBIG00000041134 ENSRBIG00000035661 DLG5 (ENSRBIG00000030077) NT5C1B (ENSRBIG00000035028) RDH14 (ENSRBIG00000031223) KCNS3 (ENSRBIG00000031172) MSGN1 (ENSRBIG00000031141) GEN1 (ENSRBIG00000034123) SMC6 (ENSRBIG00000032057) VSNL1 (ENSRBIG00000043244) RAD51AP2 (ENSRBIG00000041339) CYRIA (ENSRBIG00000037805) ENSRBIG00000016916 MYCN (ENSRBIG00000031158) DDX1 (ENSRBIG00000041664) ENSRBIG00000039266 #22 NBAS (ENSRBIG00000040798) ENSRBIG00000000433 LRATD1 (ENSRBIG00000004537) Platyrrhini ANCESTRAL SPECIES 13 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.c #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.t ##16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a.a.b #29 ENSGT00950000183050.b.b.a.a.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h.a.b #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Cebidae ANCESTRAL SPECIES 15 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.c #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.t ##16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a.a.b #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h.a.b #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345.m Cebidae_a ANCESTRAL SPECIES 30 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.c #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.t ##16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a.a.b #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h.a.b.b #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345.m ENSGT00390000012029.h Bolivian squirrel monkey MODERN SPECIES 48 FBXO48 (ENSSBOG00000021207) #11 PLEK (ENSSBOG00000031071) #12 CNRIP1 (ENSSBOG00000020258) #13 PPP3R1 (ENSSBOG00000021442) ENSSBOG00000026710 #14 DNAAF10 (ENSSBOG00000035020) #15 ENSSBOG00000025275 ##16 ETAA1 (ENSSBOG00000020086) #17 MEIS1 (ENSSBOG00000000062) #18 ENSSBOG00000018908 SPRED2 (ENSSBOG00000000156) #19 ACTR2 (ENSSBOG00000028028) #21 ENSSBOG00000024339 #20 ENSSBOG00000018757 ENSSBOG00000031295 RAB1A (ENSSBOG00000023732) #22 CEP68 (ENSSBOG00000033296) #23 SLC1A4 (ENSSBOG00000023405) #24 AFTPH (ENSSBOG00000027803) #27 ENSSBOG00000019039 #26 LGALSL (ENSSBOG00000029775) #28 PELI1 (ENSSBOG00000001340) #29 VPS54 (ENSSBOG00000034598) #30 UGP2 (ENSSBOG00000035973) #31 ENSSBOG00000035941 #34 WDPCP (ENSSBOG00000020988) #35 OTX1 (ENSSBOG00000030274) #36 EHBP1 (ENSSBOG00000027993) #37 TMEM17 (ENSSBOG00000026954) ENSSBOG00000019927 COMMD1 (ENSSBOG00000032499) Capuchin MODERN SPECIES 23 FBXO48 (ENSCCAG00000016980) #11 PLEK (ENSCCAG00000026558) #12 CNRIP1 (ENSCCAG00000034672) #13 PPP3R1 (ENSCCAG00000029751) ENSCCAG00000017887 ENSCCAG00000030366 #14 DNAAF10 (ENSCCAG00000018459) #15 ENSCCAG00000030405 ##16 ETAA1 (ENSCCAG00000027189) #17 ENSCCAG00000023051 MEIS1 (ENSCCAG00000020640) #18 SPRED2 (ENSCCAG00000035702) #19 ACTR2 (ENSCCAG00000030047) #21 ENSCCAG00000021773 #20 ENSCCAG00000038117 RAB1A (ENSCCAG00000021869) #22 CEP68 (ENSCCAG00000022595) #23 ENSCCAG00000037790 SLC1A4 (ENSCCAG00000022825) #24 ENSCCAG00000032655 AFTPH (ENSCCAG00000022631) #27 ENSCCAG00000030319 #26 LGALSL (ENSCCAG00000035879) #28 ENSCCAG00000033895 #29 VPS54 (ENSCCAG00000037148) #30 UGP2 (ENSCCAG00000038081) #31 ENSCCAG00000032985 #34 WDPCP (ENSCCAG00000026603) #35 OTX1 (ENSCCAG00000037783) #36 EHBP1 (ENSCCAG00000022934) #37 TMEM17 (ENSCCAG00000033287) Mas night monkey MODERN SPECIES 655 SPRED2 (ENSANAG00000024110) #19 ENSANAG00000020597 #20 ACTR2 (ENSANAG00000038066) #21 ENSANAG00000038454 RAB1A (ENSANAG00000020929) #22 CEP68 (ENSANAG00000035796) #23 SLC1A4 (ENSANAG00000034703) #24 ENSANAG00000025925 #26 AFTPH (ENSANAG00000033138) #27 LGALSL (ENSANAG00000035714) #28 ENSANAG00000026716 ENSANAG00000029544 #29 VPS54 (ENSANAG00000021718) #30 UGP2 (ENSANAG00000035096) #31 ENSANAG00000019559 ENSANAG00000038114 #34 ENSANAG00000029892 WDPCP (ENSANAG00000033928) #35 OTX1 (ENSANAG00000032160) #36 EHBP1 (ENSANAG00000022884) #37 Simiiformes ANCESTRAL SPECIES ENSGT00940000154958.lb.b ##22 Catarrhini ANCESTRAL SPECIES 16 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT00390000012446 ENSGT01030000234770 Hominoidea ANCESTRAL SPECIES 15 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT01030000234770 ENSGT00390000012446 Hominidae ANCESTRAL SPECIES 17 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT01030000234770 ENSGT00390000012446 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT01030000234770 ENSGT00390000012446 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT01030000234770 ENSGT00390000012446 Pan ANCESTRAL SPECIES 12 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT00390000012446 ENSGT01070000254198 Bonobo MODERN SPECIES 15 C2orf66 (ENSPPAG00000029492) GTF3C3 (ENSPPAG00000002745) CCDC150 (ENSPPAG00000038945) HECW2 (ENSPPAG00000033901) STK17B (ENSPPAG00000023641) ENSPPAG00000040576 DNAH7 (ENSPPAG00000039511) SLC39A10 (ENSPPAG00000042493) ENSPPAG00000043506 TMEFF2 (ENSPPAG00000008977) ENSPPAG00000043388 CAVIN2 (ENSPPAG00000041899) NABP1 (ENSPPAG00000016940) MYO1B (ENSPPAG00000039631) STAT4 (ENSPPAG00000038188) ENSPPAG00000041123 ##22 STAT1 (ENSPPAG00000039583) GLS (ENSPPAG00000025885) NAB1 (ENSPPAG00000001818) NEMP2 (ENSPPAG00000025075) MFSD6 (ENSPPAG00000039522) INPP1 (ENSPPAG00000037765) ENSPPAG00000034445 C2orf88 (ENSPPAG00000026004) MSTN (ENSPPAG00000035642) PMS1 (ENSPPAG00000012384) ORMDL1 (ENSPPAG00000041520) OSGEPL1 (ENSPPAG00000037207) ANKAR (ENSPPAG00000039080) ENSPPAG00000037076 ASNSD1 (ENSPPAG00000028748) Chimpanzee MODERN SPECIES 15 PGAP1 (ENSPTRG00000012769) C2BH2orf66 (ENSPTRG00000012768) GTF3C3 (ENSPTRG00000012767) CCDC150 (ENSPTRG00000012765) HECW2 (ENSPTRG00000012764) STK17B (ENSPTRG00000012763) ENSPTRG00000047674 DNAH7 (ENSPTRG00000012761) SLC39A10 (ENSPTRG00000012760) ENSPTRG00000048383 TMEFF2 (ENSPTRG00000012756) CAVIN2 (ENSPTRG00000012755) NABP1 (ENSPTRG00000012754) MYO1B (ENSPTRG00000023453) STAT4 (ENSPTRG00000047534) ENSPTRG00000045283 ##22 STAT1 (ENSPTRG00000012749) GLS (ENSPTRG00000012747) NAB1 (ENSPTRG00000012746) NEMP2 (ENSPTRG00000012745) MFSD6 (ENSPTRG00000012743) INPP1 (ENSPTRG00000012742) HIBCH (ENSPTRG00000012741) C2BH2orf88 (ENSPTRG00000012740) MSTN (ENSPTRG00000012738) ENSPTRG00000046804 PMS1 (ENSPTRG00000012737) ORMDL1 (ENSPTRG00000012736) OSGEPL1 (ENSPTRG00000012735) ANKAR (ENSPTRG00000012733) ENSPTRG00000044371 Gorilla MODERN SPECIES 15 C2orf66 (ENSGGOG00000038009) GTF3C3 (ENSGGOG00000011787) CCDC150 (ENSGGOG00000010004) HECW2 (ENSGGOG00000013295) STK17B (ENSGGOG00000016830) DNAH7 (ENSGGOG00000008893) ENSGGOG00000037015 SLC39A10 (ENSGGOG00000008154) ENSGGOG00000041675 TMEFF2 (ENSGGOG00000007989) ENSGGOG00000015813 CAVIN2 (ENSGGOG00000001639) NABP1 (ENSGGOG00000036855) MYO1B (ENSGGOG00000002321) STAT4 (ENSGGOG00000042976) ENSGGOG00000043398 ##22 STAT1 (ENSGGOG00000000611) GLS (ENSGGOG00000007590) NAB1 (ENSGGOG00000013842) NEMP2 (ENSGGOG00000015874) MFSD6 (ENSGGOG00000025721) INPP1 (ENSGGOG00000015605) HIBCH (ENSGGOG00000004988) C2orf88 (ENSGGOG00000025627) MSTN (ENSGGOG00000027833) PMS1 (ENSGGOG00000025218) ORMDL1 (ENSGGOG00000015259) OSGEPL1 (ENSGGOG00000027223) ANKAR (ENSGGOG00000016191) ENSGGOG00000041328 ASNSD1 (ENSGGOG00000001328) Gibbon MODERN SPECIES 14 HECW2 (ENSNLEG00000006821) STK17B (ENSNLEG00000006813) ENSNLEG00000033012 DNAH7 (ENSNLEG00000006803) SLC39A10 (ENSNLEG00000006791) ENSNLEG00000028697 ENSNLEG00000034807 ENSNLEG00000035441 ENSNLEG00000031318 TMEFF2 (ENSNLEG00000006778) ENSNLEG00000013541 CAVIN2 (ENSNLEG00000006776) NABP1 (ENSNLEG00000030065) MYO1B (ENSNLEG00000006735) STAT4 (ENSNLEG00000006726) ENSNLEG00000006724 ##22 STAT1 (ENSNLEG00000006694) ENSNLEG00000006675 NAB1 (ENSNLEG00000035600) ENSNLEG00000026634 MFSD6 (ENSNLEG00000006661) INPP1 (ENSNLEG00000006655) HIBCH (ENSNLEG00000006646) C2orf88 (ENSNLEG00000006645) MSTN (ENSNLEG00000006642) PMS1 (ENSNLEG00000006628) ORMDL1 (ENSNLEG00000006625) OSGEPL1 (ENSNLEG00000006619) ANKAR (ENSNLEG00000006610) ENSNLEG00000027789 ASNSD1 (ENSNLEG00000006606) Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000155059.f.a.a ENSGT00390000008666.d.b ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000155059.f.a.a ENSGT00390000008666.d.b ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00390000014165.c.a.b.b.b.q.k ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000155059.f.a.a ENSGT00390000008666.d.b ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00390000014165.c.a.b.b.b.q.k ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000155059.f.a.a ENSGT00390000008666.d.b ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00390000014165.c.a.b.b.b.q.k ENSGT00940000160335 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000155059.f.a.a ENSGT00390000008666.d.b ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 Sooty mangabey MODERN SPECIES 570 GTF3C3 (ENSCATG00000041160) CCDC150 (ENSCATG00000039440) HECW2 (ENSCATG00000042498) STK17B (ENSCATG00000041109) ENSCATG00000041947 ENSCATG00000005122 DNAH7 (ENSCATG00000044354) SLC39A10 (ENSCATG00000003457) ENSCATG00000038644 TMEFF2 (ENSCATG00000044161) ENSCATG00000041477 CAVIN2 (ENSCATG00000042767) NABP1 (ENSCATG00000038449) MYO1B (ENSCATG00000029501) STAT4 (ENSCATG00000015585) ENSCATG00000039791 ##22 STAT1 (ENSCATG00000039195) GLS (ENSCATG00000035136) NAB1 (ENSCATG00000043564) NEMP2 (ENSCATG00000037139) MFSD6 (ENSCATG00000044632) INPP1 (ENSCATG00000038582) HIBCH (ENSCATG00000035931) C2orf88 (ENSCATG00000002994) MSTN (ENSCATG00000041487) ENSCATG00000005962 ENSCATG00000038138 PMS1 (ENSCATG00000034295) ORMDL1 (ENSCATG00000037728) OSGEPL1 (ENSCATG00000041932) ANKAR (ENSCATG00000036884) Drill MODERN SPECIES 440 ENSMLEG00000029437 ENSMLEG00000001178 TMEFF2 (ENSMLEG00000031779) CAVIN2 (ENSMLEG00000037420) NABP1 (ENSMLEG00000038424) MYO1B (ENSMLEG00000043715) STAT4 (ENSMLEG00000032638) STAT1 (ENSMLEG00000038755) ENSMLEG00000038983 ##22 GLS (ENSMLEG00000043417) NAB1 (ENSMLEG00000042030) NEMP2 (ENSMLEG00000003080) MFSD6 (ENSMLEG00000037622) INPP1 (ENSMLEG00000031756) HIBCH (ENSMLEG00000029940) C2orf88 (ENSMLEG00000002411) MSTN (ENSMLEG00000009875) ENSMLEG00000015243 ENSMLEG00000032655 PMS1 (ENSMLEG00000043721) ENSMLEG00000037268 ORMDL1 (ENSMLEG00000038631) OSGEPL1 (ENSMLEG00000028233) ANKAR (ENSMLEG00000038848) Rhinopithecus ANCESTRAL SPECIES 321 ENSGT00940000156056.A ENSGT00940000160312.f ENSGT00950000182910.a.a.a ENSGT00940000157820.a.b ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT00940000154958.lb.b ##22 ENSGT01050000244905.E ENSGT00390000010463.a.b ENSGT00390000006330.a.a.i ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785.h ENSGT00890000139491.e ENSGT00390000011537 ENSGT00940000160657 Golden snub-nosed monkey MODERN SPECIES 2182 ENSRROG00000008432 MYO1B (ENSRROG00000032066) STAT4 (ENSRROG00000045074) ENSRROG00000041477 ##22 STAT1 (ENSRROG00000040303) GLS (ENSRROG00000042018) NAB1 (ENSRROG00000034786) NEMP2 (ENSRROG00000043510) MFSD6 (ENSRROG00000043337) INPP1 (ENSRROG00000028979) C2orf88 (ENSRROG00000025891) HIBCH (ENSRROG00000036643) MSTN (ENSRROG00000003026) Black snub-nosed monkey MODERN SPECIES 287 ENSRBIG00000017988 NABP1 (ENSRBIG00000018759) MYO1B (ENSRBIG00000039167) STAT4 (ENSRBIG00000031959) STAT1 (ENSRBIG00000041866) ENSRBIG00000034734 ##22 GLS (ENSRBIG00000028313) Platyrrhini ANCESTRAL SPECIES 9 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT01050000244905.E ENSGT00940000154958.lb.b ##22 ENSGT00390000010463.a.b ENSGT00390000006330.a.a ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491 ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT00390000012446 ENSGT01030000234770 ENSGT00390000015143 Cebidae ANCESTRAL SPECIES 11 ENSGT00950000182908.D ENSGT00390000016484 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ENSGT00940000155282 ENSGT00940000160335 ENSGT00940000156056.A ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT01050000244905.E ENSGT00940000154958.lb.b ##22 ENSGT00390000010463.a.b ENSGT00390000006330.a.a ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491 ENSGT00390000011537 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT00390000012446 ENSGT01030000234770 ENSGT00390000015143 Cebidae_a ANCESTRAL SPECIES 107 ENSGT00940000156056.A ENSGT00950000182910.a.a.a ENSGT00940000155812 ENSGT00940000155752 ENSGT01050000244905.D ENSGT01050000244905.E ENSGT00940000154958.lb.b ##22 ENSGT00390000010463.a.b ENSGT00390000006330.a.a ENSGT00390000002174.b ENSGT00530000063599.B ENSGT00940000156785 ENSGT00890000139491 ENSGT00940000160657 ENSGT00940000157085 ENSGT00950000183178.b.a ENSGT00940000153744.A ENSGT00680000100065 ENSGT00390000012446 ENSGT01070000254198 ENSGT00390000015143 ENSGT00940000154770.q.a.b.b Bolivian squirrel monkey MODERN SPECIES 177 TMEFF2 (ENSSBOG00000032615) CAVIN2 (ENSSBOG00000027082) NABP1 (ENSSBOG00000029846) ENSSBOG00000024257 ENSSBOG00000025845 MYO1B (ENSSBOG00000024212) STAT4 (ENSSBOG00000028696) STAT1 (ENSSBOG00000021364) ENSSBOG00000025345 ##22 GLS (ENSSBOG00000032290) ENSSBOG00000021637 ##33 ENSSBOG00000024065 NAB1 (ENSSBOG00000028629) NEMP2 (ENSSBOG00000025986) MFSD6 (ENSSBOG00000027092) INPP1 (ENSSBOG00000033808) HIBCH (ENSSBOG00000022609) MSTN (ENSSBOG00000026528) PMS1 (ENSSBOG00000033196) ORMDL1 (ENSSBOG00000032805) OSGEPL1 (ENSSBOG00000031666) ANKAR (ENSSBOG00000030320) ASNSD1 (ENSSBOG00000007659) ENSSBOG00000016302 Marmoset MODERN SPECIES 18 ENSCJAG00000010515 MAP3K2 (ENSCJAG00000010475) ERCC3 (ENSCJAG00000010416) ENSCJAG00000070344 ENSCJAG00000074639 CYP27C1 (ENSCJAG00000010387) ENSCJAG00000010218 ENSCJAG00000046931 ENSCJAG00000000889 ENSCJAG00000083259 ENSCJAG00000066008 ENSCJAG00000083914 ENSCJAG00000076732 STAT4 (ENSCJAG00000005895) STAT1 (ENSCJAG00000005819) ENSCJAG00000063639 ##22 GLS (ENSCJAG00000005763) NAB1 (ENSCJAG00000005748) ENSCJAG00000079078 NEMP2 (ENSCJAG00000005743) MFSD6 (ENSCJAG00000005733) INPP1 (ENSCJAG00000005706) HIBCH (ENSCJAG00000005679) C2orf88 (ENSCJAG00000005673) ENSCJAG00000075719 MSTN (ENSCJAG00000005664) PMS1 (ENSCJAG00000005590) ENSCJAG00000048656 ENSCJAG00000002739 ENSCJAG00000077119 ENSCJAG00000055386 Mas night monkey MODERN SPECIES 595 STAT4 (ENSANAG00000024671) ENSANAG00000029760 ##22 STAT1 (ENSANAG00000027993) GLS (ENSANAG00000007551) Simiiformes ANCESTRAL SPECIES ENSGT00940000154958.mb ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000154958.mb ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000154958.mb ##22 Marmoset MODERN SPECIES 5 PLEK (ENSCJAG00000006477) #12 CNRIP1 (ENSCJAG00000039706) #13 PPP3R1 (ENSCJAG00000006498) PNO1 (ENSCJAG00000006564) #14 DNAAF10 (ENSCJAG00000044589) #15 ENSCJAG00000006589 ##16 ENSCJAG00000083243 ETAA1 (ENSCJAG00000006604) #17 MEIS1 (ENSCJAG00000006613) #18 ENSCJAG00000073899 ENSCJAG00000067866 ENSCJAG00000079193 ENSCJAG00000080598 SPRED2 (ENSCJAG00000006693) #19 ACTR2 (ENSCJAG00000006722) #21 ENSCJAG00000046275 ##22 ENSCJAG00000074307 ENSCJAG00000072263 CEP68 (ENSCJAG00000006788) #23 SLC1A4 (ENSCJAG00000006795) #24 ENSCJAG00000074052 ENSCJAG00000074553 SERTAD2 (ENSCJAG00000006818) #25 AFTPH (ENSCJAG00000006819) #27 ENSCJAG00000046867 #26 ENSCJAG00000006878 #28 ENSCJAG00000070703 PELI1 (ENSCJAG00000006889) #29 VPS54 (ENSCJAG00000006914) #30 UGP2 (ENSCJAG00000006960) #31 ENSCJAG00000007018 #34 Catarrhini ANCESTRAL SPECIES ENSGT00940000154958.mb ##22 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.mb ##22 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Rhinopithecus ANCESTRAL SPECIES 395 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556.tb.a #21 ENSGT00940000155078.a.b.a.b ENSGT00940000154958.mb ##22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 Black snub-nosed monkey MODERN SPECIES 2273 ENSRBIG00000037473 ENSRBIG00000042206 ##22 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2968 ENSRROG00000038212 ##22 ENSRROG00000030886 ENSRROG00000043934 SHCBP1 (ENSRROG00000044250) VPS35 (ENSRROG00000040561) ORC6 (ENSRROG00000000515) MYLK3 (ENSRROG00000044699) C16orf87 (ENSRROG00000027463) GPT2 (ENSRROG00000042469) DNAJA2 (ENSRROG00000041281) NETO2 (ENSRROG00000041130) ITFG1 (ENSRROG00000038711) PHKB (ENSRROG00000033180) ENSRROG00000012670 ABCC12 (ENSRROG00000033734) ABCC11 (ENSRROG00000034803) Golden snub-nosed monkey MODERN SPECIES 3026 MEIS1 (ENSRROG00000036544) #18 SPRED2 (ENSRROG00000031997) #19 ENSRROG00000040495 ACTR2 (ENSRROG00000043956) #21 ENSRROG00000044448 ##22 CEP68 (ENSRROG00000030391) #23 SLC1A4 (ENSRROG00000032007) #24 ENSRROG00000042327 SERTAD2 (ENSRROG00000026882) #25 ENSRROG00000038317 #27 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.l.b #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.s #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.tb.a #21 ENSGT00940000154958.mb ##22 ENSGT00940000154958.lb.a #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.h #34 ENSGT00390000016551 #35 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00940000161234 #36 ENSGT00940000157597 #37 Cercopithecinae_a DUPLICATION Cercopithecinae_a DUPLICATION Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154958.mb.c.a.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000154958.mb.c.a.a ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000154958.mb.c.a.a ##22 Drill MODERN SPECIES 344 ENSMLEG00000028287 ##22 Macaca ANCESTRAL SPECIES ENSGT00940000154958.mb.c.a.a ##22 Pig-tailed macaque MODERN SPECIES 380 SHCBP1 (ENSMNEG00000029402) ENSMNEG00000028935 ENSMNEG00000028852 ENSMNEG00000028604 ##22 ENSMNEG00000028034 ENSMNEG00000000645 ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154958.mb.c.a.b ##22 Macaca ANCESTRAL SPECIES ENSGT00940000154958.mb.c.a.b ##22 Pig-tailed macaque MODERN SPECIES 380 ENSMNEG00000000645 ##22 ENSMNEG00000028034 ENSMNEG00000028604 ##22 ENSMNEG00000028852 ENSMNEG00000028935 SHCBP1 (ENSMNEG00000029402) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154958.mb.c.b ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000154958.mb.c.b ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000154958.mb.c.b ##22 Drill MODERN SPECIES 720 ENSMLEG00000028592 ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154958.mb.d ##22 Macaca ANCESTRAL SPECIES ENSGT00940000154958.mb.d ##22 Pig-tailed macaque MODERN SPECIES 341 APLF (ENSMNEG00000028788) #10 FBXO48 (ENSMNEG00000026784) #11 PLEK (ENSMNEG00000029803) #12 CNRIP1 (ENSMNEG00000028096) #13 PPP3R1 (ENSMNEG00000043603) ENSMNEG00000031066 #14 DNAAF10 (ENSMNEG00000027774) #15 C1D (ENSMNEG00000040612) #16 ENSMNEG00000038737 ETAA1 (ENSMNEG00000043227) #17 MEIS1 (ENSMNEG00000037352) #18 ENSMNEG00000023818 ENSMNEG00000004414 SPRED2 (ENSMNEG00000028343) #19 ACTR2 (ENSMNEG00000044163) #21 ENSMNEG00000042121 ##22 CEP68 (ENSMNEG00000032212) #23 SLC1A4 (ENSMNEG00000004689) #24 ENSMNEG00000006388 SERTAD2 (ENSMNEG00000008861) #25 ENSMNEG00000025227 #26 AFTPH (ENSMNEG00000040816) #27 LGALSL (ENSMNEG00000029755) #28 PELI1 (ENSMNEG00000030553) #29 VPS54 (ENSMNEG00000031281) #30 UGP2 (ENSMNEG00000038452) #31 MDH1 (ENSMNEG00000039034) #34 WDPCP (ENSMNEG00000030809) #35 OTX1 (ENSMNEG00000044308) #36 EHBP1 (ENSMNEG00000043070) #37 ENSMNEG00000038346 Tarsier DUPLICATION Tarsier MODERN SPECIES 5506 ENSTSYG00000029880 #22 Tarsier MODERN SPECIES 741 RAB1A (ENSTSYG00000005996) #22 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.g.a ##34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Bushbaby MODERN SPECIES 139 ENSOGAG00000005688 #21 RAB1A (ENSOGAG00000026181) #22 CEP68 (ENSOGAG00000005687) #23 SLC1A4 (ENSOGAG00000005682) #24 SERTAD2 (ENSOGAG00000011272) #25 ENSOGAG00000011268 #27 LGALSL (ENSOGAG00000007901) #28 PELI1 (ENSOGAG00000013984) #29 VPS54 (ENSOGAG00000013980) #30 UGP2 (ENSOGAG00000013975) #31 ENSOGAG00000014487 ##34 WDPCP (ENSOGAG00000026615) #35 OTX1 (ENSOGAG00000027686) #36 EHBP1 (ENSOGAG00000005236) #37 TMEM17 (ENSOGAG00000015014) ENSOGAG00000028774 COMMD1 (ENSOGAG00000029292) Lemuriformes ANCESTRAL SPECIES 19 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.g.a ##34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Lemuriformes_a ANCESTRAL SPECIES 52 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.g.a ##34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Coquerels sifaka MODERN SPECIES 157 MEIS1 (ENSPCOG00000026417) #18 ENSPCOG00000017120 ENSPCOG00000003824 SPRED2 (ENSPCOG00000021475) #19 ACTR2 (ENSPCOG00000025808) #21 RAB1A (ENSPCOG00000017244) #22 CEP68 (ENSPCOG00000017947) #23 SLC1A4 (ENSPCOG00000008394) #24 ENSPCOG00000014082 #26 AFTPH (ENSPCOG00000015597) #27 LGALSL (ENSPCOG00000024215) #28 PELI1 (ENSPCOG00000016939) #29 VPS54 (ENSPCOG00000021532) #30 UGP2 (ENSPCOG00000021592) #31 ENSPCOG00000022476 ##34 WDPCP (ENSPCOG00000021207) #35 OTX1 (ENSPCOG00000007128) #36 EHBP1 (ENSPCOG00000013807) #37 TMEM17 (ENSPCOG00000003689) COMMD1 (ENSPCOG00000002593) CCT4 (ENSPCOG00000024760) Greater bamboo lemur MODERN SPECIES 617 PROKR1 (ENSPSMG00000000830) #8 APLF (ENSPSMG00000000808) #10 ENSPSMG00000000764 #11 PLEK (ENSPSMG00000000754) #12 CNRIP1 (ENSPSMG00000000727) #13 PPP3R1 (ENSPSMG00000000675) PNO1 (ENSPSMG00000000616) #14 DNAAF10 (ENSPSMG00000000572) #15 C1D (ENSPSMG00000000528) #16 ETAA1 (ENSPSMG00000000519) #17 MEIS1 (ENSPSMG00000000482) #18 SPRED2 (ENSPSMG00000000404) #19 ACTR2 (ENSPSMG00000000347) #21 ENSPSMG00000000286 RAB1A (ENSPSMG00000000273) #22 CEP68 (ENSPSMG00000000219) #23 SLC1A4 (ENSPSMG00000000139) #24 SERTAD2 (ENSPSMG00000024045) #25 AFTPH (ENSPSMG00000024022) #27 LGALSL (ENSPSMG00000023973) #28 Mouse lemur MODERN SPECIES 26 BMP10 (ENSMICG00000044994) ARHGAP25 (ENSMICG00000003739) #7 PROKR1 (ENSMICG00000045105) #8 ENSMICG00000003735 #10 FBXO48 (ENSMICG00000027392) #11 PLEK (ENSMICG00000003728) #12 CNRIP1 (ENSMICG00000003722) #13 PPP3R1 (ENSMICG00000037583) ENSMICG00000010897 #14 DNAAF10 (ENSMICG00000010876) #15 C1D (ENSMICG00000032141) #16 ETAA1 (ENSMICG00000033585) #17 MEIS1 (ENSMICG00000017054) #18 SPRED2 (ENSMICG00000006435) #19 ENSMICG00000036415 #21 RAB1A (ENSMICG00000012587) #22 CEP68 (ENSMICG00000037255) #23 SLC1A4 (ENSMICG00000012577) #24 ENSMICG00000041471 ENSMICG00000044806 #26 AFTPH (ENSMICG00000037342) #27 LGALSL (ENSMICG00000031755) #28 PELI1 (ENSMICG00000044746) #29 VPS54 (ENSMICG00000035608) #30 UGP2 (ENSMICG00000006509) #31 ENSMICG00000015195 ##34 WDPCP (ENSMICG00000017077) #35 OTX1 (ENSMICG00000032707) #36 ENSMICG00000036558 EHBP1 (ENSMICG00000011224) #37 ENSMICG00000035187 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Tree shrew MODERN SPECIES 1821 ENSTBEG00000003333 #22 Glires ANCESTRAL SPECIES 13 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Lagomorpha ANCESTRAL SPECIES 10 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.lb.a #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Rabbit MODERN SPECIES 11 ARHGAP25 (ENSOCUG00000010212) #7 PROKR1 (ENSOCUG00000026978) #8 APLF (ENSOCUG00000006121) #10 FBXO48 (ENSOCUG00000006116) #11 PLEK (ENSOCUG00000006113) #12 CNRIP1 (ENSOCUG00000006109) #13 PPP3R1 (ENSOCUG00000027562) ENSOCUG00000006100 #14 DNAAF10 (ENSOCUG00000006087) #15 ENSOCUG00000009771 #16 ETAA1 (ENSOCUG00000001812) #17 MEIS1 (ENSOCUG00000001842) #18 ENSOCUG00000034052 SPRED2 (ENSOCUG00000004913) #19 ACTR2 (ENSOCUG00000004906) #21 RAB1A (ENSOCUG00000017003) #22 CEP68 (ENSOCUG00000016996) #23 ENSOCUG00000010821 #24 SERTAD2 (ENSOCUG00000008192) #25 AFTPH (ENSOCUG00000006390) #27 LGALSL (ENSOCUG00000013957) #28 ENSOCUG00000031191 PELI1 (ENSOCUG00000027961) #29 VPS54 (ENSOCUG00000002143) #30 ENSOCUG00000002137 #31 MDH1 (ENSOCUG00000006166) #34 WDPCP (ENSOCUG00000006156) #35 OTX1 (ENSOCUG00000021773) #36 EHBP1 (ENSOCUG00000013563) #37 ENSOCUG00000037865 TMEM17 (ENSOCUG00000010487) Pika MODERN SPECIES 3798 RAB1A (ENSOPRG00000006595) #22 CEP68 (ENSOPRG00000006588) #23 SLC1A4 (ENSOPRG00000006584) #24 Rodentia ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.f #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Naked mole-rat female MODERN SPECIES 23 PLEK (ENSHGLG00000019154) #12 CNRIP1 (ENSHGLG00000045252) #13 ENSHGLG00000047583 PPP3R1 (ENSHGLG00000044041) PNO1 (ENSHGLG00000045522) #14 DNAAF10 (ENSHGLG00000012153) #15 ENSHGLG00000012332 #16 ETAA1 (ENSHGLG00000040625) #17 ENSHGLG00000020742 MEIS1 (ENSHGLG00000012586) #18 ENSHGLG00000013407 ENSHGLG00000041829 ENSHGLG00000034618 ENSHGLG00000042711 #19 ENSHGLG00000037092 RAB1A (ENSHGLG00000045077) #22 CEP68 (ENSHGLG00000018361) #23 ENSHGLG00000048375 #23 SLC1A4 (ENSHGLG00000036619) #24 ENSHGLG00000049432 ENSHGLG00000047996 #25 ENSHGLG00000004348 #26 ENSHGLG00000004286 #27 ENSHGLG00000035846 #28 PELI1 (ENSHGLG00000033688) #29 ENSHGLG00000033380 VPS54 (ENSHGLG00000004813) #30 UGP2 (ENSHGLG00000005211) #31 MDH1 (ENSHGLG00000033109) #34 ENSHGLG00000034790 WDPCP (ENSHGLG00000005902) #35 Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.f #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Hystricomorpha_b DUPLICATION Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958.y #22 ENSGT00810000125473.A.f #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Long-tailed chinchilla MODERN SPECIES 131 BMP10 (ENSCLAG00000007285) ARHGAP25 (ENSCLAG00000007583) #7 PROKR1 (ENSCLAG00000008825) #8 APLF (ENSCLAG00000009519) #10 FBXO48 (ENSCLAG00000010201) #11 PLEK (ENSCLAG00000010835) #12 CNRIP1 (ENSCLAG00000012035) #13 PPP3R1 (ENSCLAG00000012159) PNO1 (ENSCLAG00000015058) #14 DNAAF10 (ENSCLAG00000014702) #15 C1D (ENSCLAG00000011883) #16 ETAA1 (ENSCLAG00000013575) #17 MEIS1 (ENSCLAG00000010420) #18 SPRED2 (ENSCLAG00000011449) #19 ACTR2 (ENSCLAG00000010920) #21 RAB1A (ENSCLAG00000014766) #22 CEP68 (ENSCLAG00000012193) #23 SLC1A4 (ENSCLAG00000008207) #24 SERTAD2 (ENSCLAG00000008318) #25 AFTPH (ENSCLAG00000012032) #27 ENSCLAG00000012344 #26 LGALSL (ENSCLAG00000015114) #28 PELI1 (ENSCLAG00000006481) #29 VPS54 (ENSCLAG00000007366) #30 UGP2 (ENSCLAG00000010416) #31 MDH1 (ENSCLAG00000007815) #34 ENSCLAG00000008400 #35 OTX1 (ENSCLAG00000010265) #36 EHBP1 (ENSCLAG00000007561) #37 TMEM17 (ENSCLAG00000013487) B3GNT2 (ENSCLAG00000013147) Degu MODERN SPECIES 119 BMP10 (ENSODEG00000010621) ARHGAP25 (ENSODEG00000012290) #7 PROKR1 (ENSODEG00000011030) #8 FBXO48 (ENSODEG00000011400) #11 PLEK (ENSODEG00000011044) #12 CNRIP1 (ENSODEG00000011175) #13 PPP3R1 (ENSODEG00000012397) PNO1 (ENSODEG00000011769) #14 ENSODEG00000011043 #15 ENSODEG00000019812 ENSODEG00000011242 #16 MEIS1 (ENSODEG00000012314) #18 ENSODEG00000012312 SPRED2 (ENSODEG00000012243) #19 ENSODEG00000010956 #21 ENSODEG00000011248 #22 SLC1A4 (ENSODEG00000011406) #24 SERTAD2 (ENSODEG00000011523) #25 ENSODEG00000011805 #27 LGALSL (ENSODEG00000011485) #28 ENSODEG00000011901 PELI1 (ENSODEG00000011189) #29 VPS54 (ENSODEG00000012541) #30 ENSODEG00000011552 #31 ENSODEG00000012736 MDH1 (ENSODEG00000011582) #34 WDPCP (ENSODEG00000011330) #35 ENSODEG00000019821 ENSODEG00000011103 ENSODEG00000011160 OTX1 (ENSODEG00000012071) #36 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154958.z #22 Degu MODERN SPECIES 68 ENSODEG00000012690 PRSS58 (ENSODEG00000013832) ENSODEG00000013684 ENSODEG00000012923 ENSODEG00000012554 ENSODEG00000013222 ENSODEG00000014167 ENSODEG00000012766 TRPV6 (ENSODEG00000015340) EPHB6 (ENSODEG00000012570) TRPV5 (ENSODEG00000014153) ENSODEG00000014532 KEL (ENSODEG00000014311) ENSODEG00000012786 ENSODEG00000013095 ENSODEG00000014420 #22 ENSODEG00000014142 GSTK1 (ENSODEG00000013235) CASP2 (ENSODEG00000012945) CLCN1 (ENSODEG00000013200) FAM131B (ENSODEG00000013311) ZYX (ENSODEG00000013085) EPHA1 (ENSODEG00000013070) ENSODEG00000012320 ENSODEG00000012803 ENSODEG00000020018 ENSODEG00000012681 ENSODEG00000012159 ENSODEG00000012316 TCAF1 (ENSODEG00000012182) ENSODEG00000013843 Guinea pig MODERN SPECIES 48 SPRED2 (ENSCPOG00000037272) #19 ACTR2 (ENSCPOG00000025808) #21 RAB1A (ENSCPOG00000015437) #22 CEP68 (ENSCPOG00000001592) #23 SLC1A4 (ENSCPOG00000008754) #24 ENSCPOG00000033401 #27 LGALSL (ENSCPOG00000039657) #28 PELI1 (ENSCPOG00000037199) #29 VPS54 (ENSCPOG00000037738) #30 UGP2 (ENSCPOG00000008459) #31 MDH1 (ENSCPOG00000010755) #34 ENSCPOG00000036317 #35 ENSCPOG00000030520 #35 OTX1 (ENSCPOG00000004881) #36 EHBP1 (ENSCPOG00000002001) #37 TMEM17 (ENSCPOG00000035038) B3GNT2 (ENSCPOG00000034379) COMMD1 (ENSCPOG00000002088) Sciuridae ANCESTRAL SPECIES 16 ENSGT00940000154544.a #8 ENSGT00940000164891 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 5 PROKR1 (ENSSVLG00005021730) #8 ENSSVLG00005021708 APLF (ENSSVLG00005021663) #10 FBXO48 (ENSSVLG00005021637) #11 PLEK (ENSSVLG00005021563) #12 CNRIP1 (ENSSVLG00005021502) #13 PPP3R1 (ENSSVLG00005021432) PNO1 (ENSSVLG00005021413) #14 DNAAF10 (ENSSVLG00005021285) #15 C1D (ENSSVLG00005021246) #16 ETAA1 (ENSSVLG00005021110) #17 MEIS1 (ENSSVLG00005020894) #18 ENSSVLG00005020854 SPRED2 (ENSSVLG00005020765) #19 ACTR2 (ENSSVLG00005020565) #21 ENSSVLG00005020476 #22 CEP68 (ENSSVLG00005020379) #23 SOWAHC (ENSSVLG00005020212) SEPTIN10 (ENSSVLG00005020034) SH3RF3 (ENSSVLG00005019900) EDAR (ENSSVLG00005019677) CCDC138 (ENSSVLG00005019503) RANBP2 (ENSSVLG00005018522) ENSSVLG00005018289 ENSSVLG00005018042 UXS1 (ENSSVLG00005017952) ENSSVLG00005017929 ENSSVLG00005017910 ST6GAL2 (ENSSVLG00005017851) ENSSVLG00005017814 SLC5A7 (ENSSVLG00005017705) Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005015610 ENSSVLG00005015597 ENSSVLG00005015508 ENSSVLG00005015482 ENSSVLG00005015454 ENSSVLG00005015394 ENSSVLG00005015368 ENSSVLG00005015244 YWHAH (ENSSVLG00005015202) SLC5A1 (ENSSVLG00005014942) ENSSVLG00005014768 ENSSVLG00005014557 ENSSVLG00005014505 DEPDC5 (ENSSVLG00005014165) PRR14L (ENSSVLG00005013651) ENSSVLG00005013578 #22 PISD (ENSSVLG00005013477) ENSSVLG00005013121 ENSSVLG00005013045 SFI1 (ENSSVLG00005011756) ENSSVLG00005010969 ENSSVLG00005010889 DRG1 (ENSSVLG00005010798) PATZ1 (ENSSVLG00005010670) PIK3IP1 (ENSSVLG00005010612) LIMK2 (ENSSVLG00005010456) RNF185 (ENSSVLG00005010368) PLA2G3 (ENSSVLG00005010180) INPP5J (ENSSVLG00005009829) SELENOM (ENSSVLG00005009730) SMTN (ENSSVLG00005009610) Marmotini ANCESTRAL SPECIES 14 ENSGT00940000164891 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000154431.e.a.f ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Alpin marmot MODERN SPECIES 6 CNRIP1 (ENSMMMG00000005618) #13 ENSMMMG00000005630 PPP3R1 (ENSMMMG00000005651) PNO1 (ENSMMMG00000005661) #14 DNAAF10 (ENSMMMG00000005668) #15 C1D (ENSMMMG00000005685) #16 ETAA1 (ENSMMMG00000005704) #17 ENSMMMG00000005754 ENSMMMG00000005757 MEIS1 (ENSMMMG00000005763) #18 ENSMMMG00000005870 ENSMMMG00000005873 SPRED2 (ENSMMMG00000005882) #19 ENSMMMG00000005906 ACTR2 (ENSMMMG00000005910) #21 RAB1A (ENSMMMG00000005929) #22 CEP68 (ENSMMMG00000005980) #23 SLC1A4 (ENSMMMG00000006026) #24 ENSMMMG00000006042 ENSMMMG00000006048 AFTPH (ENSMMMG00000006097) #27 LGALSL (ENSMMMG00000006152) #28 PELI1 (ENSMMMG00000006175) #29 VPS54 (ENSMMMG00000006188) #30 UGP2 (ENSMMMG00000006263) #31 ENSMMMG00000006286 MDH1 (ENSMMMG00000006303) #34 WDPCP (ENSMMMG00000006330) #35 OTX1 (ENSMMMG00000006353) #36 EHBP1 (ENSMMMG00000006363) #37 TMEM17 (ENSMMMG00000006473) Marmotini_b ANCESTRAL SPECIES 44 ENSGT00940000164891 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000154431.e.a.f ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Arctic ground squirrel MODERN SPECIES 47 FBXO48 (ENSUPAG00010010632) #11 PLEK (ENSUPAG00010010638) #12 CNRIP1 (ENSUPAG00010010645) #13 PPP3R1 (ENSUPAG00010010653) PNO1 (ENSUPAG00010010658) #14 DNAAF10 (ENSUPAG00010010668) #15 ENSUPAG00010010674 #16 ETAA1 (ENSUPAG00010010688) #17 ENSUPAG00010010694 MEIS1 (ENSUPAG00010010695) #18 ENSUPAG00010010713 ENSUPAG00010010722 SPRED2 (ENSUPAG00010010724) #19 ENSUPAG00010010742 ACTR2 (ENSUPAG00010010750) #21 RAB1A (ENSUPAG00010010773) #22 CEP68 (ENSUPAG00010010822) #23 SLC1A4 (ENSUPAG00010010829) #24 ENSUPAG00010010837 SERTAD2 (ENSUPAG00010010839) #25 AFTPH (ENSUPAG00010010843) #27 LGALSL (ENSUPAG00010010929) #28 PELI1 (ENSUPAG00010010945) #29 VPS54 (ENSUPAG00010010962) #30 UGP2 (ENSUPAG00010011000) #31 MDH1 (ENSUPAG00010011052) #34 WDPCP (ENSUPAG00010011061) #35 OTX1 (ENSUPAG00010011094) #36 EHBP1 (ENSUPAG00010011097) #37 TMEM17 (ENSUPAG00010011243) B3GNT2 (ENSUPAG00010011255) Squirrel DUPLICATION Squirrel DUPLICATION Squirrel MODERN SPECIES 91 ARHGAP25 (ENSSTOG00000010347) #7 ENSSTOG00000010343 APLF (ENSSTOG00000014677) #10 FBXO48 (ENSSTOG00000014675) #11 PLEK (ENSSTOG00000014667) #12 CNRIP1 (ENSSTOG00000004875) #13 PPP3R1 (ENSSTOG00000025985) PNO1 (ENSSTOG00000026989) #14 DNAAF10 (ENSSTOG00000024192) #15 C1D (ENSSTOG00000012346) #16 ETAA1 (ENSSTOG00000027144) #17 MEIS1 (ENSSTOG00000009914) #18 ENSSTOG00000024155 SPRED2 (ENSSTOG00000022318) #19 ACTR2 (ENSSTOG00000012608) #21 ENSSTOG00000020693 #22 CEP68 (ENSSTOG00000011479) #23 SLC1A4 (ENSSTOG00000025160) #24 SERTAD2 (ENSSTOG00000008454) #25 ENSSTOG00000030042 #26 AFTPH (ENSSTOG00000020828) #27 LGALSL (ENSSTOG00000024204) #28 PELI1 (ENSSTOG00000026315) #29 VPS54 (ENSSTOG00000023517) #30 UGP2 (ENSSTOG00000000789) #31 ENSSTOG00000023912 MDH1 (ENSSTOG00000014227) #34 WDPCP (ENSSTOG00000014213) #35 OTX1 (ENSSTOG00000025219) #36 EHBP1 (ENSSTOG00000020225) #37 TMEM17 (ENSSTOG00000009462) Squirrel MODERN SPECIES 419 ENSSTOG00000030531 USP51 (ENSSTOG00000016321) ENSSTOG00000028849 FOXR2 (ENSSTOG00000014071) ENSSTOG00000019963 RRAGB (ENSSTOG00000004660) ENSSTOG00000031660 KLF8 (ENSSTOG00000012012) UBQLN2 (ENSSTOG00000014053) ENSSTOG00000024953 NBDY (ENSSTOG00000033489) ENSSTOG00000030343 ENSSTOG00000020423 ENSSTOG00000033408 #22 ENSSTOG00000025630 ENSSTOG00000019559 ENSSTOG00000026134 Squirrel MODERN SPECIES 325 ZNF148 (ENSSTOG00000027082) SLC12A8 (ENSSTOG00000028300) HEG1 (ENSSTOG00000019628) ITGB5 (ENSSTOG00000007965) UMPS (ENSSTOG00000005682) KALRN (ENSSTOG00000005605) ENSSTOG00000033153 #22 ENSSTOG00000004225 CCDC14 (ENSSTOG00000004201) MYLK (ENSSTOG00000000046) HACD2 (ENSSTOG00000023651) ADCY5 (ENSSTOG00000000043) SEC22A (ENSSTOG00000000042) PDIA5 (ENSSTOG00000000040) SEMA5B (ENSSTOG00000010313) Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 382 Gkn3 (ENSDORG00000029528) Bmp10 (ENSDORG00000012857) Arhgap25 (ENSDORG00000012856) #7 ENSDORG00000012853 #8 Aplf (ENSDORG00000011241) #10 Fbxo48 (ENSDORG00000011239) #11 Plek (ENSDORG00000029923) #12 Cnrip1 (ENSDORG00000025749) #13 Ppp3r1 (ENSDORG00000024931) ENSDORG00000006867 #14 Dnaaf10 (ENSDORG00000006862) #15 C1d (ENSDORG00000003300) #16 Meis1 (ENSDORG00000008334) #18 Spred2 (ENSDORG00000012174) #19 Actr2 (ENSDORG00000001487) #21 ENSDORG00000028628 #22 Cep68 (ENSDORG00000002111) #23 Slc1a4 (ENSDORG00000002394) #24 Sertad2 (ENSDORG00000025954) #25 ENSDORG00000027058 #26 ENSDORG00000004159 #27 ENSDORG00000027919 #28 Peli1 (ENSDORG00000025404) #29 Vps54 (ENSDORG00000009782) #30 Ugp2 (ENSDORG00000013164) #31 Rasl2-9 (ENSDORG00000027038) Mdh1 (ENSDORG00000000099) #34 ENSDORG00000009021 Wdpcp (ENSDORG00000003329) #35 Otx1 (ENSDORG00000024553) #36 ENSDORG00000023858 Kangaroo rat MODERN SPECIES 338 Trpv1 (ENSDORG00000009857) Shpk (ENSDORG00000013798) Ctns (ENSDORG00000013799) ENSDORG00000013801 Emc6 (ENSDORG00000013802) ENSDORG00000013803 Ncbp3 (ENSDORG00000010141) Camkk1 (ENSDORG00000002757) P2rx1 (ENSDORG00000002759) Atp2a3 (ENSDORG00000010345) ENSDORG00000027978 Zzef1 (ENSDORG00000013546) Ankfy1 (ENSDORG00000001111) Ube2g1 (ENSDORG00000027019) Spns2 (ENSDORG00000000440) ENSDORG00000002112 #22 Smtnl2 (ENSDORG00000010818) Fbxo39 (ENSDORG00000015547) Med31 (ENSDORG00000012204) Txndc17 (ENSDORG00000025800) ENSDORG00000012202 Pitpnm3 (ENSDORG00000007558) Aipl1 (ENSDORG00000029045) Wscd1 (ENSDORG00000010220) Derl2 (ENSDORG00000026480) Dhx33 (ENSDORG00000014344) ENSDORG00000029038 Rpain (ENSDORG00000007467) Nup88 (ENSDORG00000007462) Rabep1 (ENSDORG00000007460) Scimp (ENSDORG00000028534) Myomorpha ANCESTRAL SPECIES 24 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Lesser Egyptian jerboa MODERN SPECIES 74 Iah1 (ENSJJAG00000015466) Adam17 (ENSJJAG00000020057) Ywhaq (ENSJJAG00000008194) ENSJJAG00000011210 #11 Plek (ENSJJAG00000005757) #12 Cnrip1 (ENSJJAG00000016204) #13 Ppp3r1 (ENSJJAG00000016869) Pno1 (ENSJJAG00000022862) #14 Dnaaf10 (ENSJJAG00000019935) #15 ENSJJAG00000023186 #16 ENSJJAG00000021064 ENSJJAG00000011226 #17 Meis1 (ENSJJAG00000015459) #18 Spred2 (ENSJJAG00000020977) #19 Actr2 (ENSJJAG00000008642) #21 Rab1a (ENSJJAG00000014396) #22 Cep68 (ENSJJAG00000016421) #23 Slc1a4 (ENSJJAG00000002418) #24 Sertad2 (ENSJJAG00000015989) #25 ENSJJAG00000020384 #27 Gm5065 (ENSJJAG00000016772) #28 Peli1 (ENSJJAG00000000296) #29 Vps54 (ENSJJAG00000012401) #30 Ugp2 (ENSJJAG00000014432) #31 Mdh1 (ENSJJAG00000024369) #34 ENSJJAG00000014833 #35 ENSJJAG00000015148 #35 Otx1 (ENSJJAG00000011287) #36 Ehbp1 (ENSJJAG00000023917) #37 Tmem17 (ENSJJAG00000007029) B3gnt2 (ENSJJAG00000007561) Muroidea ANCESTRAL SPECIES 21 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Upper Galilee mountains blind mole rat MODERN SPECIES 1542 Rab1a (ENSNGAG00000005838) #22 Cep68 (ENSNGAG00000024137) #23 Slc1a4 (ENSNGAG00000022015) #24 Sertad2 (ENSNGAG00000019290) #25 ENSNGAG00000010686 #26 Aftph (ENSNGAG00000022259) #27 ENSNGAG00000017298 #28 Peli1 (ENSNGAG00000014256) #29 Vps54 (ENSNGAG00000019724) #30 Ugp2 (ENSNGAG00000014716) #31 Mdh1 (ENSNGAG00000022959) #34 ENSNGAG00000016412 Wdpcp (ENSNGAG00000022039) #35 Otx1 (ENSNGAG00000023167) #36 Ehbp1 (ENSNGAG00000022543) #37 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Murinae ANCESTRAL SPECIES 12 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.s #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00950000183152.A Mus ANCESTRAL SPECIES 14 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.s #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00950000183152.A Mus_A ANCESTRAL SPECIES 2 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.s #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00950000183152.A Mus_B ANCESTRAL SPECIES 2 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.s #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00950000183152.A Mus_C ANCESTRAL SPECIES 3 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052.s #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00950000183152.A spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0016943 Sec61g (MGP_SPRETEiJ_G0016944) Egfr (MGP_SPRETEiJ_G0016945) Fbxo48 (MGP_SPRETEiJ_G0016946) #11 Plek (MGP_SPRETEiJ_G0016947) #12 MGP_SPRETEiJ_G0016948 #13 Ppp3r1 (MGP_SPRETEiJ_G0016949) Dnaaf10 (MGP_SPRETEiJ_G0016950) #15 Pno1 (MGP_SPRETEiJ_G0016951) #14 C1d (MGP_SPRETEiJ_G0016952) #16 Etaa1 (MGP_SPRETEiJ_G0016953) #17 Meis1 (MGP_SPRETEiJ_G0016954) #18 Asb12 (MGP_SPRETEiJ_G0016955) Spred2 (MGP_SPRETEiJ_G0016956) #19 Actr2 (MGP_SPRETEiJ_G0016957) #21 Rab1a (MGP_SPRETEiJ_G0016958) #22 Cep68 (MGP_SPRETEiJ_G0016959) #23 Slc1a4 (MGP_SPRETEiJ_G0016960) #24 Sertad2 (MGP_SPRETEiJ_G0016961) #25 Aftph (MGP_SPRETEiJ_G0016962) #27 Lgalsl (MGP_SPRETEiJ_G0016963) #28 Peli1 (MGP_SPRETEiJ_G0016964) #29 Vps54 (MGP_SPRETEiJ_G0016965) #30 Ugp2 (MGP_SPRETEiJ_G0016966) #31 Mdh1 (MGP_SPRETEiJ_G0016967) #34 Wdpcp (MGP_SPRETEiJ_G0016968) #35 Otx1 (MGP_SPRETEiJ_G0016969) #36 Ehbp1 (MGP_SPRETEiJ_G0016970) #37 Tmem17 (MGP_SPRETEiJ_G0016971) MGP_SPRETEiJ_G0016972 B3gnt2 (MGP_SPRETEiJ_G0016973) Steppe mouse MODERN SPECIES 3178 Meis1 (ENSMSIG00000012755) #18 ENSMSIG00000013123 ENSMSIG00000013132 Spred2 (ENSMSIG00000013142) #19 Actr2 (ENSMSIG00000013218) #21 Rab1a (ENSMSIG00000013288) #22 Cep68 (ENSMSIG00000013342) #23 Slc1a4 (ENSMSIG00000013384) #24 ENSMSIG00000013417 Sertad2 (ENSMSIG00000013434) #25 Aftph (ENSMSIG00000013440) #27 ENSMSIG00000013501 Mouse MODERN SPECIES 2 Pom121l12 (ENSMUSG00000084135) Vstm2a (ENSMUSG00000048834) Sec61g (ENSMUSG00000078974) Egfr (ENSMUSG00000020122) Fbxo48 (ENSMUSG00000044966) #11 Plek (ENSMUSG00000020120) #12 Cnrip1 (ENSMUSG00000044629) #13 Ppp3r1 (ENSMUSG00000033953) Dnaaf10 (ENSMUSG00000078970) #15 Pno1 (ENSMUSG00000020116) #14 C1d (ENSMUSG00000000581) #16 Etaa1 (ENSMUSG00000016984) #17 Meis1 (ENSMUSG00000020160) #18 Spred2 (ENSMUSG00000045671) #19 Actr2 (ENSMUSG00000020152) #21 Rab1a (ENSMUSG00000020149) #22 Cep68 (ENSMUSG00000044066) #23 Slc1a4 (ENSMUSG00000020142) #24 Sertad2 (ENSMUSG00000049800) #25 Aftph (ENSMUSG00000049659) #27 Lgalsl (ENSMUSG00000042363) #28 Peli1 (ENSMUSG00000020134) #29 Vps54 (ENSMUSG00000020128) #30 Ugp2 (ENSMUSG00000001891) #31 Mdh1 (ENSMUSG00000020321) #34 Wdpcp (ENSMUSG00000020319) #35 Otx1 (ENSMUSG00000005917) #36 Ehbp1 (ENSMUSG00000042302) #37 Tmem17 (ENSMUSG00000049904) B3gnt2 (ENSMUSG00000051650) Commd1b (ENSMUSG00000098650) Ryukyu mouse MODERN SPECIES 2 Cobl (MGP_CAROLIEiJ_G0016100) MGP_CAROLIEiJ_G0016101 Sec61g (MGP_CAROLIEiJ_G0016102) Egfr (MGP_CAROLIEiJ_G0016103) Fbxo48 (MGP_CAROLIEiJ_G0016104) #11 Plek (MGP_CAROLIEiJ_G0016105) #12 Cnrip1 (MGP_CAROLIEiJ_G0016106) #13 Ppp3r1 (MGP_CAROLIEiJ_G0016107) Dnaaf10 (MGP_CAROLIEiJ_G0016108) #15 Pno1 (MGP_CAROLIEiJ_G0016109) #14 C1d (MGP_CAROLIEiJ_G0016110) #16 Etaa1 (MGP_CAROLIEiJ_G0016111) #17 Meis1 (MGP_CAROLIEiJ_G0016112) #18 Spred2 (MGP_CAROLIEiJ_G0016113) #19 Actr2 (MGP_CAROLIEiJ_G0016114) #21 Rab1a (MGP_CAROLIEiJ_G0016115) #22 Cep68 (MGP_CAROLIEiJ_G0016116) #23 Slc1a4 (MGP_CAROLIEiJ_G0016117) #24 Sertad2 (MGP_CAROLIEiJ_G0016118) #25 Aftph (MGP_CAROLIEiJ_G0016119) #27 Gm5065 (MGP_CAROLIEiJ_G0016120) #28 Peli1 (MGP_CAROLIEiJ_G0016121) #29 Vps54 (MGP_CAROLIEiJ_G0016122) #30 Ugp2 (MGP_CAROLIEiJ_G0016123) #31 Mdh1 (MGP_CAROLIEiJ_G0016124) #34 Wdpcp (MGP_CAROLIEiJ_G0016125) #35 Otx1 (MGP_CAROLIEiJ_G0016126) #36 Ehbp1 (MGP_CAROLIEiJ_G0016127) #37 Tmem17 (MGP_CAROLIEiJ_G0016128) MGP_CAROLIEiJ_G0016129 MGP_CAROLIEiJ_G0016130 Shrew mouse MODERN SPECIES 4 Cobl (MGP_PahariEiJ_G0016791) MGP_PahariEiJ_G0016790 Sec61g (MGP_PahariEiJ_G0016789) Egfr (MGP_PahariEiJ_G0016788) Fbxo48 (MGP_PahariEiJ_G0016787) #11 Plek (MGP_PahariEiJ_G0016786) #12 MGP_PahariEiJ_G0016785 #13 Ppp3r1 (MGP_PahariEiJ_G0016784) Pno1 (MGP_PahariEiJ_G0016783) #14 Dnaaf10 (MGP_PahariEiJ_G0016782) #15 C1d (MGP_PahariEiJ_G0016781) #16 Etaa1 (MGP_PahariEiJ_G0016780) #17 Meis1 (MGP_PahariEiJ_G0016779) #18 Spred2 (MGP_PahariEiJ_G0016778) #19 Actr2 (MGP_PahariEiJ_G0016777) #21 Rab1a (MGP_PahariEiJ_G0016776) #22 Cep68 (MGP_PahariEiJ_G0016775) #23 Slc1a4 (MGP_PahariEiJ_G0016774) #24 Sertad2 (MGP_PahariEiJ_G0016773) #25 Aftph (MGP_PahariEiJ_G0016772) #27 Lgalsl (MGP_PahariEiJ_G0016771) #28 MGP_PahariEiJ_G0016770 #28 Peli1 (MGP_PahariEiJ_G0016769) #29 Vps54 (MGP_PahariEiJ_G0016768) #30 Ugp2 (MGP_PahariEiJ_G0016767) #31 Mdh1 (MGP_PahariEiJ_G0016766) #34 MGP_PahariEiJ_G0016765 #35 Otx1 (MGP_PahariEiJ_G0016764) #36 Ehbp1 (MGP_PahariEiJ_G0016763) #37 Tmem17 (MGP_PahariEiJ_G0016762) MGP_PahariEiJ_G0016761 Rat DUPLICATION Rat DUPLICATION Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES Cfap90 (ENSRNOG00000047406) Fastkd3 (ENSRNOG00000027422) Mtrr (ENSRNOG00000017826) Zfp455l1 (ENSRNOG00000042308) ENSRNOG00000068953 RGD1566325 (ENSRNOG00000017963) LOC102547287 (ENSRNOG00000016462) LOC102549842 (ENSRNOG00000049259) Zfp748 (ENSRNOG00000069921) Spry3-ps1 (ENSRNOG00000064505) LOC102551340 (ENSRNOG00000047145) Zfp273l-ps1 (ENSRNOG00000046353) ENSRNOG00000068667 ENSRNOG00000066169 ENSRNOG00000067171 #22 ENSRNOG00000070839 #22 ENSRNOG00000068976 #22 ENSRNOG00000063413 ENSRNOG00000067926 ENSRNOG00000069813 ENSRNOG00000067477 #22 ENSRNOG00000070838 #22 AABR07001348.1 (ENSRNOG00000023081) Ppp1r14c (ENSRNOG00000016368) Iyd (ENSRNOG00000016286) Plekhg1 (ENSRNOG00000016011) Mthfd1l (ENSRNOG00000019582) Akap12 (ENSRNOG00000019549) Zbtb2 (ENSRNOG00000019544) Rmnd1 (ENSRNOG00000019501) Armt1 (ENSRNOG00000019489) Rat MODERN SPECIES Adcy2 (ENSRNOG00000032150) Cfap90 (ENSRNOG00000047406) Fastkd3 (ENSRNOG00000027422) Mtrr (ENSRNOG00000017826) Zfp455l1 (ENSRNOG00000042308) ENSRNOG00000068953 RGD1566325 (ENSRNOG00000017963) LOC102547287 (ENSRNOG00000016462) LOC102549842 (ENSRNOG00000049259) Zfp748 (ENSRNOG00000069921) Spry3-ps1 (ENSRNOG00000064505) LOC102551340 (ENSRNOG00000047145) Zfp273l-ps1 (ENSRNOG00000046353) ENSRNOG00000068667 ENSRNOG00000066169 ENSRNOG00000067171 #22 ENSRNOG00000070839 #22 ENSRNOG00000068976 #22 ENSRNOG00000063413 ENSRNOG00000067926 ENSRNOG00000069813 ENSRNOG00000067477 #22 ENSRNOG00000070838 #22 AABR07001348.1 (ENSRNOG00000023081) Ppp1r14c (ENSRNOG00000016368) Iyd (ENSRNOG00000016286) Plekhg1 (ENSRNOG00000016011) Mthfd1l (ENSRNOG00000019582) Akap12 (ENSRNOG00000019549) Zbtb2 (ENSRNOG00000019544) Rmnd1 (ENSRNOG00000019501) Rat DUPLICATION Rat MODERN SPECIES Fastkd3 (ENSRNOG00000027422) Mtrr (ENSRNOG00000017826) Zfp455l1 (ENSRNOG00000042308) ENSRNOG00000068953 RGD1566325 (ENSRNOG00000017963) LOC102547287 (ENSRNOG00000016462) LOC102549842 (ENSRNOG00000049259) Zfp748 (ENSRNOG00000069921) Spry3-ps1 (ENSRNOG00000064505) LOC102551340 (ENSRNOG00000047145) Zfp273l-ps1 (ENSRNOG00000046353) ENSRNOG00000068667 ENSRNOG00000066169 ENSRNOG00000067171 #22 ENSRNOG00000070839 #22 ENSRNOG00000068976 #22 ENSRNOG00000063413 ENSRNOG00000067926 ENSRNOG00000069813 ENSRNOG00000067477 #22 ENSRNOG00000070838 #22 AABR07001348.1 (ENSRNOG00000023081) Ppp1r14c (ENSRNOG00000016368) Iyd (ENSRNOG00000016286) Plekhg1 (ENSRNOG00000016011) Mthfd1l (ENSRNOG00000019582) Akap12 (ENSRNOG00000019549) Zbtb2 (ENSRNOG00000019544) Rmnd1 (ENSRNOG00000019501) Armt1 (ENSRNOG00000019489) Ccdc170 (ENSRNOG00000024280) Rat MODERN SPECIES RGD1566325 (ENSRNOG00000017963) LOC102547287 (ENSRNOG00000016462) LOC102549842 (ENSRNOG00000049259) Zfp748 (ENSRNOG00000069921) Spry3-ps1 (ENSRNOG00000064505) LOC102551340 (ENSRNOG00000047145) Zfp273l-ps1 (ENSRNOG00000046353) ENSRNOG00000068667 ENSRNOG00000066169 ENSRNOG00000067171 #22 ENSRNOG00000070839 #22 ENSRNOG00000068976 #22 ENSRNOG00000063413 ENSRNOG00000067926 ENSRNOG00000069813 ENSRNOG00000067477 #22 ENSRNOG00000070838 #22 AABR07001348.1 (ENSRNOG00000023081) Ppp1r14c (ENSRNOG00000016368) Iyd (ENSRNOG00000016286) Plekhg1 (ENSRNOG00000016011) Mthfd1l (ENSRNOG00000019582) Akap12 (ENSRNOG00000019549) Zbtb2 (ENSRNOG00000019544) Rmnd1 (ENSRNOG00000019501) Armt1 (ENSRNOG00000019489) Ccdc170 (ENSRNOG00000024280) Esr1 (ENSRNOG00000019358) Syne1 (ENSRNOG00000018960) Myct1 (ENSRNOG00000018858) Vip (ENSRNOG00000018808) Rat MODERN SPECIES Fbxo5 (ENSRNOG00000024077) Vip (ENSRNOG00000018808) Myct1 (ENSRNOG00000018858) Syne1 (ENSRNOG00000018960) Esr1 (ENSRNOG00000019358) Ccdc170 (ENSRNOG00000024280) Armt1 (ENSRNOG00000019489) Rmnd1 (ENSRNOG00000019501) Zbtb2 (ENSRNOG00000019544) Akap12 (ENSRNOG00000019549) Mthfd1l (ENSRNOG00000019582) Plekhg1 (ENSRNOG00000016011) Iyd (ENSRNOG00000016286) Ppp1r14c (ENSRNOG00000016368) AABR07001348.1 (ENSRNOG00000023081) ENSRNOG00000070838 #22 ENSRNOG00000067477 #22 ENSRNOG00000069813 ENSRNOG00000067926 ENSRNOG00000063413 ENSRNOG00000068976 #22 ENSRNOG00000070839 #22 ENSRNOG00000067171 #22 ENSRNOG00000066169 ENSRNOG00000068667 Zfp273l-ps1 (ENSRNOG00000046353) LOC102551340 (ENSRNOG00000047145) Spry3-ps1 (ENSRNOG00000064505) Zfp748 (ENSRNOG00000069921) LOC102549842 (ENSRNOG00000049259) LOC102547287 (ENSRNOG00000016462) Rat MODERN SPECIES 5 Sec61g (ENSRNOG00000005203) Egfr (ENSRNOG00000004332) Fbxo48 (ENSRNOG00000023026) #11 Plek (ENSRNOG00000005214) #12 Cnrip1 (ENSRNOG00000005326) #13 Pno1 (ENSRNOG00000005524) #14 C1d (ENSRNOG00000005982) #16 Hnrnpk-ps1 (ENSRNOG00000063529) Etaa1l1 (ENSRNOG00000006185) #17 Meis1 (ENSRNOG00000004606) #18 Spred2 (ENSRNOG00000004888) #19 Actr2 (ENSRNOG00000004959) #21 AABR07016566.1 (ENSRNOG00000051648) ENSRNOG00000070133 Rpl38 (ENSRNOG00000033686) Rab1a (ENSRNOG00000004992) #22 Cep68 (ENSRNOG00000027282) #23 Slc1a4 (ENSRNOG00000005248) #24 Sertad2 (ENSRNOG00000005393) #25 Aftph (ENSRNOG00000005411) #27 LOC108352861 (ENSRNOG00000029052) Lgalsl (ENSRNOG00000005464) #28 LOC108352809 (ENSRNOG00000042277) Peli1 (ENSRNOG00000006329) #29 Vps54 (ENSRNOG00000007125) #30 Ugp2 (ENSRNOG00000008079) #31 Mdh1 (ENSRNOG00000008103) #34 Wdpcp (ENSRNOG00000054331) #35 ENSRNOG00000065408 Otx1 (ENSRNOG00000065081) #36 Ehbp1 (ENSRNOG00000008917) #37 Cricetidae ANCESTRAL SPECIES 14 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Cricetinae ANCESTRAL SPECIES 37 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 121 ENSCGRG00001016899 Vstm2a (ENSCGRG00001018623) ENSCGRG00001010828 Egfr (ENSCGRG00001020721) Fbxo48 (ENSCGRG00001017787) #11 Plek (ENSCGRG00001023663) #12 Cnrip1 (ENSCGRG00001014944) #13 Ppp3r1 (ENSCGRG00001020769) ENSCGRG00001007472 #14 ENSCGRG00001017610 #15 C1d (ENSCGRG00001023376) #16 Etaa1 (ENSCGRG00001020354) #17 Meis1 (ENSCGRG00001009447) #18 Spred2 (ENSCGRG00001015924) #19 ENSCGRG00001017243 #21 ENSCGRG00001012691 #22 Cep68 (ENSCGRG00001014327) #23 Slc1a4 (ENSCGRG00001017715) #24 ENSCGRG00001005474 Sertad2 (ENSCGRG00001009657) #25 Aftph (ENSCGRG00001016162) #27 ENSCGRG00001009126 #26 Gm5065 (ENSCGRG00001013868) #28 Peli1 (ENSCGRG00001021958) #29 Vps54 (ENSCGRG00001009286) #30 UGP2 (ENSCGRG00001012845) #31 Mdh1 (ENSCGRG00001021102) #34 ENSCGRG00001023990 Wdpcp (ENSCGRG00001012886) #35 Otx1 (ENSCGRG00001017328) #36 Ehbp1 (ENSCGRG00001022633) #37 Chinese hamster chok1gshd MODERN SPECIES 16 Cited1 (ENSCGRG00001022122) Hdac8 (ENSCGRG00001022455) Phka1 (ENSCGRG00001020129) ENSCGRG00001024855 Dmrtc1a (ENSCGRG00001018624) ENSCGRG00001023387 Nap1l2 (ENSCGRG00001003632) Eif2s3y (ENSCGRG00001016219) ENSCGRG00001015812 ENSCGRG00001007129 ENSCGRG00001012385 Cdx4 (ENSCGRG00001020397) ENSCGRG00001012274 Chic1 (ENSCGRG00001011931) Tsx (ENSCGRG00001005790) ENSCGRG00001004584 #22 Zcchc13 (ENSCGRG00001009786) ENSCGRG00001000809 Slc16a2 (ENSCGRG00001001787) ENSCGRG00001024219 ##33 Rlim (ENSCGRG00001019959) Nexmif (ENSCGRG00001017017) Abcb7 (ENSCGRG00001016748) Uprt (ENSCGRG00001001968) Zdhhc15 (ENSCGRG00001017482) Magee2 (ENSCGRG00001009574) Pbdc1 (ENSCGRG00001022880) Magee1 (ENSCGRG00001014880) Fgf16 (ENSCGRG00001020173) Atrx (ENSCGRG00001010011) Magt1 (ENSCGRG00001023814) Golden Hamster MODERN SPECIES 639 Grik2 (ENSMAUG00000012525) Ascc3 (ENSMAUG00000018304) Sim1 (ENSMAUG00000021356) Egfr (ENSMAUG00000000581) Fbxo48 (ENSMAUG00000020533) #11 Plek (ENSMAUG00000011299) #12 Cnrip1 (ENSMAUG00000019592) #13 Ppp3r1 (ENSMAUG00000014614) Pno1 (ENSMAUG00000014995) #14 Dnaaf10 (ENSMAUG00000011603) #15 C1d (ENSMAUG00000008974) #16 Etaa1 (ENSMAUG00000010594) #17 Meis1 (ENSMAUG00000001130) #18 Spred2 (ENSMAUG00000013657) #19 Actr2 (ENSMAUG00000008458) #21 Rab1a (ENSMAUG00000012156) #22 Cep68 (ENSMAUG00000014820) #23 Slc1a4 (ENSMAUG00000019775) #24 Sertad2 (ENSMAUG00000004242) #25 Aftph (ENSMAUG00000016557) #27 ENSMAUG00000015033 #28 Peli1 (ENSMAUG00000012937) #29 Vps54 (ENSMAUG00000010788) #30 ENSMAUG00000012689 #31 Mdh1 (ENSMAUG00000018086) #34 ENSMAUG00000012018 Wdpcp (ENSMAUG00000011349) #35 Otx1 (ENSMAUG00000019114) #36 Ehbp1 (ENSMAUG00000000935) #37 Tmem17 (ENSMAUG00000003448) B3gnt2 (ENSMAUG00000002963) Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Northern American deer mouse MODERN SPECIES 1 Egfr (ENSPEMG00000012745) Fbxo48 (ENSPEMG00000023069) #11 Plek (ENSPEMG00000022796) #12 Cnrip1 (ENSPEMG00000031287) #13 Ppp3r1 (ENSPEMG00000021806) Pno1 (ENSPEMG00000022989) #14 Dnaaf10 (ENSPEMG00000022118) #15 ENSPEMG00000026465 #16 Etaa1 (ENSPEMG00000011918) #17 Meis1 (ENSPEMG00000008113) #18 ENSPEMG00000012914 ENSPEMG00000028236 Spred2 (ENSPEMG00000029042) #19 Actr2 (ENSPEMG00000015727) #21 ENSPEMG00000025517 Rab1a (ENSPEMG00000009340) #22 Cep68 (ENSPEMG00000002161) #23 Slc1a4 (ENSPEMG00000018063) #24 ENSPEMG00000016241 Sertad2 (ENSPEMG00000027852) #25 Aftph (ENSPEMG00000010156) #27 ENSPEMG00000015267 #28 Peli1 (ENSPEMG00000030617) #29 Vps54 (ENSPEMG00000012405) #30 Ugp2 (ENSPEMG00000010268) #31 Mdh1 (ENSPEMG00000007456) #34 Wdpcp (ENSPEMG00000016341) #35 Otx1 (ENSPEMG00000027636) #36 Ehbp1 (ENSPEMG00000014061) #37 Tmem17 (ENSPEMG00000012666) ENSPEMG00000029232 Prairie vole MODERN SPECIES 92 Vstm2a (ENSMOCG00000004039) ENSMOCG00000001784 ENSMOCG00000004092 Egfr (ENSMOCG00000000900) Fbxo48 (ENSMOCG00000015915) #11 Plek (ENSMOCG00000018168) #12 Cnrip1 (ENSMOCG00000004432) #13 Ppp3r1 (ENSMOCG00000012867) Pno1 (ENSMOCG00000017268) #14 Dnaaf10 (ENSMOCG00000000313) #15 C1d (ENSMOCG00000010860) #16 Etaa1 (ENSMOCG00000018537) #17 Meis1 (ENSMOCG00000016359) #18 Spred2 (ENSMOCG00000014005) #19 Actr2 (ENSMOCG00000008248) #21 Rab1a (ENSMOCG00000017022) #22 Cep68 (ENSMOCG00000003444) #23 Slc1a4 (ENSMOCG00000001173) #24 Sertad2 (ENSMOCG00000002173) #25 Aftph (ENSMOCG00000015081) #27 ENSMOCG00000003932 #26 Gm5065 (ENSMOCG00000014300) #28 Peli1 (ENSMOCG00000016437) #29 Vps54 (ENSMOCG00000009563) #30 Ugp2 (ENSMOCG00000009715) #31 Mdh1 (ENSMOCG00000015448) #34 Wdpcp (ENSMOCG00000003579) #35 Otx1 (ENSMOCG00000014191) #36 Ehbp1 (ENSMOCG00000007287) #37 Tmem17 (ENSMOCG00000015494) B3gnt2 (ENSMOCG00000000086) Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000153876.B ENSGT00390000003682 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000155078.a.b.a.b ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00940000168989 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Eulipotyphla ANCESTRAL SPECIES 548 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 Hedgehog MODERN SPECIES 823 RAB1A (ENSEEUG00000011721) #22 CEP68 (ENSEEUG00000011547) #23 SLC1A4 (ENSEEUG00000011445) #24 Common shrew MODERN SPECIES 2684 RAB1A (ENSSARG00000000382) #22 CEP68 (ENSSARG00000000368) #23 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Suina ANCESTRAL SPECIES 13 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Chacoan peccary MODERN SPECIES 777 PROKR1 (ENSCWAG00000017385) #8 APLF (ENSCWAG00000017353) #10 FBXO48 (ENSCWAG00000017325) #11 PLEK (ENSCWAG00000017263) #12 CNRIP1 (ENSCWAG00000017220) #13 PPP3R1 (ENSCWAG00000017182) PNO1 (ENSCWAG00000017164) #14 DNAAF10 (ENSCWAG00000017128) #15 C1D (ENSCWAG00000017088) #16 ETAA1 (ENSCWAG00000017059) #17 MEIS1 (ENSCWAG00000016382) #18 SPRED2 (ENSCWAG00000016216) #19 ENSCWAG00000016192 ACTR2 (ENSCWAG00000016124) #21 ENSCWAG00000016093 RAB1A (ENSCWAG00000016000) #22 CEP68 (ENSCWAG00000015895) #23 SLC1A4 (ENSCWAG00000015836) #24 SERTAD2 (ENSCWAG00000015818) #25 AFTPH (ENSCWAG00000015787) #27 LGALSL (ENSCWAG00000015689) #28 PELI1 (ENSCWAG00000015638) #29 VPS54 (ENSCWAG00000015086) #30 UGP2 (ENSCWAG00000014887) #31 MDH1 (ENSCWAG00000014856) #34 ENSCWAG00000014828 #35 OTX1 (ENSCWAG00000014783) #36 EHBP1 (ENSCWAG00000014544) #37 TMEM17 (ENSCWAG00000014499) ENSCWAG00000014470 B3GNT2 (ENSCWAG00000014453) Pig MODERN SPECIES 11 ARHGAP25 (ENSSSCG00000008344) #7 PROKR1 (ENSSSCG00000038148) #8 APLF (ENSSSCG00000008346) #10 FBXO48 (ENSSSCG00000008347) #11 PLEK (ENSSSCG00000008348) #12 CNRIP1 (ENSSSCG00000008349) #13 PPP3R1 (ENSSSCG00000036115) PNO1 (ENSSSCG00000008352) #14 DNAAF10 (ENSSSCG00000008353) #15 C1D (ENSSSCG00000039331) #16 ETAA1 (ENSSSCG00000023908) #17 MEIS1 (ENSSSCG00000039161) #18 ENSSSCG00000044348 SPRED2 (ENSSSCG00000008357) #19 ACTR2 (ENSSSCG00000008358) #21 RAB1A (ENSSSCG00000008359) #22 CEP68 (ENSSSCG00000008360) #23 SLC1A4 (ENSSSCG00000028282) #24 SERTAD2 (ENSSSCG00000037002) #25 AFTPH (ENSSSCG00000008363) #27 LGALSL (ENSSSCG00000030005) #28 PELI1 (ENSSSCG00000028947) #29 VPS54 (ENSSSCG00000027509) #30 UGP2 (ENSSSCG00000008368) #31 MDH1 (ENSSSCG00000025751) #34 WDPCP (ENSSSCG00000057114) #35 ENSSSCG00000030195 OTX1 (ENSSSCG00000037564) #36 EHBP1 (ENSSSCG00000008372) #37 TMEM17 (ENSSSCG00000026713) ENSSSCG00000028518 Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Camelidae ANCESTRAL SPECIES 12 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Arabian camel MODERN SPECIES 6 ARHGAP25 (ENSCDRG00005008103) #7 PROKR1 (ENSCDRG00005008059) #8 APLF (ENSCDRG00005007995) #10 FBXO48 (ENSCDRG00005007956) #11 PLEK (ENSCDRG00005007914) #12 CNRIP1 (ENSCDRG00005007885) #13 PPP3R1 (ENSCDRG00005007714) PNO1 (ENSCDRG00005007641) #14 DNAAF10 (ENSCDRG00005007600) #15 C1D (ENSCDRG00005007559) #16 ETAA1 (ENSCDRG00005007526) #17 ENSCDRG00005007509 MEIS1 (ENSCDRG00005006803) #18 SPRED2 (ENSCDRG00005006696) #19 ACTR2 (ENSCDRG00005006571) #21 RAB1A (ENSCDRG00005006403) #22 CEP68 (ENSCDRG00005006344) #23 SLC1A4 (ENSCDRG00005006273) #24 AFTPH (ENSCDRG00005006174) #27 LGALSL (ENSCDRG00005006106) #28 PELI1 (ENSCDRG00005006069) #29 VPS54 (ENSCDRG00005005842) #30 UGP2 (ENSCDRG00005005735) #31 MDH1 (ENSCDRG00005005489) #34 WDPCP (ENSCDRG00005005228) #35 OTX1 (ENSCDRG00005005204) #36 EHBP1 (ENSCDRG00005004989) #37 ENSCDRG00005004963 TMEM17 (ENSCDRG00005004930) B3GNT2 (ENSCDRG00005004917) COMMD1 (ENSCDRG00005004907) Alpaca MODERN SPECIES 3693 RAB1A (ENSVPAG00000005640) #22 ENSVPAG00000005638 #23 SLC1A4 (ENSVPAG00000005637) #24 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.gb.b ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Cetacea ANCESTRAL SPECIES 16 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B.i #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Odontoceti ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.gb.a.a.b ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B.i #31 ENSGT00390000002738.a.e.a ENSGT00940000168989 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.gb.a.a.b ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B.i #31 ENSGT00390000002738.a.e.a ENSGT00940000168989 ENSGT00530000063410.a.l #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B.i #31 ENSGT00390000002738.a.e.a ENSGT00940000168989 ENSGT00530000063410.a.l #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Monodontidae ANCESTRAL SPECIES 13 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B.i #31 ENSGT00390000002738.a.e.a ENSGT00530000063410.a.l #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00950000182802.A.ab.a.a.a.a.b.b.a ENSGT00940000153899.b.b Beluga whale MODERN SPECIES 42 ENSDLEG00000005710 #7 ARHGAP25 (ENSDLEG00000005744) #7 PROKR1 (ENSDLEG00000005769) #8 APLF (ENSDLEG00000005776) #10 FBXO48 (ENSDLEG00000005798) #11 PLEK (ENSDLEG00000005814) #12 CNRIP1 (ENSDLEG00000005826) #13 PPP3R1 (ENSDLEG00000005831) PNO1 (ENSDLEG00000005835) #14 WDR92 (ENSDLEG00000005842) #15 C1D (ENSDLEG00000013334) #16 ETAA1 (ENSDLEG00000013344) #17 MEIS1 (ENSDLEG00000013356) #18 SPRED2 (ENSDLEG00000013406) #19 ACTR2 (ENSDLEG00000013424) #21 RAB1A (ENSDLEG00000013451) #22 CEP68 (ENSDLEG00000013462) #23 SLC1A4 (ENSDLEG00000013482) #24 SERTAD2 (ENSDLEG00000013497) #25 AFTPH (ENSDLEG00000013504) #27 LGALSL (ENSDLEG00000013531) #28 PELI1 (ENSDLEG00000013564) #29 VPS54 (ENSDLEG00000013588) #30 ENSDLEG00000013630 UGP2 (ENSDLEG00000013637) #31 ENSDLEG00000013659 MDH1 (ENSDLEG00000013685) #34 WDPCP (ENSDLEG00000013723) #35 OTX1 (ENSDLEG00000013795) #36 EHBP1 (ENSDLEG00000013833) #37 ENSDLEG00000014005 Narwhal MODERN SPECIES 305 ARHGAP25 (ENSMMNG00015015108) #7 PROKR1 (ENSMMNG00015015283) #8 APLF (ENSMMNG00015015298) #10 FBXO48 (ENSMMNG00015015325) #11 PLEK (ENSMMNG00015015351) #12 CNRIP1 (ENSMMNG00015015380) #13 PPP3R1 (ENSMMNG00015015405) PNO1 (ENSMMNG00015015433) #14 DNAAF10 (ENSMMNG00015015443) #15 C1D (ENSMMNG00015015470) #16 ETAA1 (ENSMMNG00015015495) #17 MEIS1 (ENSMMNG00015015523) #18 ENSMMNG00015015655 SPRED2 (ENSMMNG00015015689) #19 ACTR2 (ENSMMNG00015015753) #21 RAB1A (ENSMMNG00015015848) #22 CEP68 (ENSMMNG00015015909) #23 SLC1A4 (ENSMMNG00015015960) #24 SERTAD2 (ENSMMNG00015016005) #25 AFTPH (ENSMMNG00015016029) #27 LGALSL (ENSMMNG00015016100) #28 PELI1 (ENSMMNG00015016144) #29 VPS54 (ENSMMNG00015016195) #30 ENSMMNG00015009005 #31 PHPT1 (ENSMMNG00015009040) ENSMMNG00015009066 #34 WDPCP (ENSMMNG00015009094) #35 OTX1 (ENSMMNG00015009119) #36 EHBP1 (ENSMMNG00015009174) #37 ENSMMNG00015009209 TMEM17 (ENSMMNG00015009216) Vaquita MODERN SPECIES 4 ARHGAP25 (ENSPSNG00000018111) #7 PROKR1 (ENSPSNG00000018062) #8 APLF (ENSPSNG00000018014) #10 FBXO48 (ENSPSNG00000017972) #11 PLEK (ENSPSNG00000017885) #12 CNRIP1 (ENSPSNG00000017800) #13 PPP3R1 (ENSPSNG00000017608) PNO1 (ENSPSNG00000017552) #14 DNAAF10 (ENSPSNG00000017470) #15 C1D (ENSPSNG00000017424) #16 ETAA1 (ENSPSNG00000017386) #17 MEIS1 (ENSPSNG00000017177) #18 ENSPSNG00000017076 SPRED2 (ENSPSNG00000016931) #19 ACTR2 (ENSPSNG00000016825) #21 RAB1A (ENSPSNG00000016689) #22 CEP68 (ENSPSNG00000016545) #23 SLC1A4 (ENSPSNG00000016415) #24 SERTAD2 (ENSPSNG00000016327) #25 AFTPH (ENSPSNG00000016250) #27 LGALSL (ENSPSNG00000016184) #28 PELI1 (ENSPSNG00000016122) #29 VPS54 (ENSPSNG00000015574) #30 ENSPSNG00000015479 MDH1 (ENSPSNG00000015270) #34 ENSPSNG00000015180 WDPCP (ENSPSNG00000014770) #35 OTX1 (ENSPSNG00000014688) #36 EHBP1 (ENSPSNG00000014468) #37 ENSPSNG00000014346 TMEM17 (ENSPSNG00000014288) Dolphin MODERN SPECIES 3564 ACTR2 (ENSTTRG00000008291) #21 RAB1A (ENSTTRG00000008285) #22 CEP68 (ENSTTRG00000008277) #23 SLC1A4 (ENSTTRG00000008269) #24 Sperm whale MODERN SPECIES 3 APLF (ENSPCTG00005008883) #10 FBXO48 (ENSPCTG00005008864) #11 PLEK (ENSPCTG00005008806) #12 CNRIP1 (ENSPCTG00005008746) #13 PPP3R1 (ENSPCTG00005008639) PNO1 (ENSPCTG00005008568) #14 WDR92 (ENSPCTG00005008494) #15 ENSPCTG00005008480 C1D (ENSPCTG00005008403) #16 ETAA1 (ENSPCTG00005008337) #17 MEIS1 (ENSPCTG00005008167) #18 ENSPCTG00005008130 ENSPCTG00005008120 SPRED2 (ENSPCTG00005008031) #19 ACTR2 (ENSPCTG00005007920) #21 RAB1A (ENSPCTG00005007858) #22 CEP68 (ENSPCTG00005007824) #23 ENSPCTG00005007798 #24 SERTAD2 (ENSPCTG00005007784) #25 AFTPH (ENSPCTG00005007713) #27 LGALSL (ENSPCTG00005007670) #28 ENSPCTG00005007660 PELI1 (ENSPCTG00005007650) #29 VPS54 (ENSPCTG00005007443) #30 UGP2 (ENSPCTG00005007338) #31 ENSPCTG00005007304 MDH1 (ENSPCTG00005007119) #34 WDPCP (ENSPCTG00005006829) #35 OTX1 (ENSPCTG00005006769) #36 EHBP1 (ENSPCTG00005006603) #37 TMEM17 (ENSPCTG00005006531) Blue whale MODERN SPECIES 4 ARHGAP25 (ENSBMSG00010014354) #7 PROKR1 (ENSBMSG00010014509) #8 APLF (ENSBMSG00010014533) #10 FBXO48 (ENSBMSG00010014557) #11 PLEK (ENSBMSG00010014580) #12 CNRIP1 (ENSBMSG00010014640) #13 PPP3R1 (ENSBMSG00010014702) PNO1 (ENSBMSG00010014773) #14 DNAAF10 (ENSBMSG00010014807) #15 C1D (ENSBMSG00010014843) #16 ETAA1 (ENSBMSG00010014898) #17 MEIS1 (ENSBMSG00010014951) #18 SPRED2 (ENSBMSG00010015313) #19 ENSBMSG00010015420 ACTR2 (ENSBMSG00010015452) #21 RAB1A (ENSBMSG00010015536) #22 CEP68 (ENSBMSG00010015630) #23 ENSBMSG00010015739 #24 SERTAD2 (ENSBMSG00010015761) #25 AFTPH (ENSBMSG00010015789) #27 ENSBMSG00010015828 LGALSL (ENSBMSG00010015854) #28 PELI1 (ENSBMSG00010015886) #29 VPS54 (ENSBMSG00010015929) #30 ENSBMSG00010016142 #31 MDH1 (ENSBMSG00010016335) #34 WDPCP (ENSBMSG00010016471) #35 OTX1 (ENSBMSG00010016810) #36 EHBP1 (ENSBMSG00010016917) #37 TMEM17 (ENSBMSG00010017316) B3GNT2 (ENSBMSG00010017335) Pecora ANCESTRAL SPECIES 5 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Yarkand deer MODERN SPECIES 2 BMP10 (ENSCHYG00000010198) ARHGAP25 (ENSCHYG00000009972) #7 PROKR1 (ENSCHYG00000009894) #8 ENSCHYG00000009477 #10 FBXO48 (ENSCHYG00000009420) #11 PLEK (ENSCHYG00000009350) #12 CNRIP1 (ENSCHYG00000009217) #13 PNO1 (ENSCHYG00000009166) #14 ENSCHYG00000008783 #15 C1D (ENSCHYG00000008709) #16 ETAA1 (ENSCHYG00000008673) #17 MEIS1 (ENSCHYG00000008476) #18 ENSCHYG00000008453 SPRED2 (ENSCHYG00000008346) #19 ACTR2 (ENSCHYG00000008112) #21 RAB1A (ENSCHYG00000007988) #22 CEP68 (ENSCHYG00000007916) #23 SLC1A4 (ENSCHYG00000007819) #24 ENSCHYG00000007790 SERTAD2 (ENSCHYG00000007769) #25 ENSCHYG00000007734 AFTPH (ENSCHYG00000007630) #27 LGALSL (ENSCHYG00000007576) #28 ENSCHYG00000007544 PELI1 (ENSCHYG00000007493) #29 ENSCHYG00000007473 VPS54 (ENSCHYG00000007200) #30 UGP2 (ENSCHYG00000007083) #31 ENSCHYG00000007056 MDH1 (ENSCHYG00000006887) #34 ENSCHYG00000006867 Percora_a ANCESTRAL SPECIES 13 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Siberian musk deer MODERN SPECIES 240 FBXO48 (ENSMMSG00000011229) #11 PLEK (ENSMMSG00000011254) #12 CNRIP1 (ENSMMSG00000011305) #13 ENSMMSG00000011356 ENSMMSG00000011434 PNO1 (ENSMMSG00000011455) #14 DNAAF10 (ENSMMSG00000011471) #15 C1D (ENSMMSG00000011514) #16 ENSMMSG00000006279 ENSMMSG00000006311 ETAA1 (ENSMMSG00000006322) #17 MEIS1 (ENSMMSG00000006369) #18 SPRED2 (ENSMMSG00000006652) #19 ACTR2 (ENSMMSG00000006727) #21 ENSMMSG00000006773 RAB1A (ENSMMSG00000006809) #22 CEP68 (ENSMMSG00000006928) #23 SLC1A4 (ENSMMSG00000007010) #24 ENSMMSG00000007124 SERTAD2 (ENSMMSG00000007146) #25 AFTPH (ENSMMSG00000007162) #27 LGALSL (ENSMMSG00000007219) #28 PELI1 (ENSMMSG00000007255) #29 VPS54 (ENSMMSG00000007345) #30 UGP2 (ENSMMSG00000007620) #31 MDH1 (ENSMMSG00000007784) #34 WDPCP (ENSMMSG00000008007) #35 OTX1 (ENSMMSG00000008093) #36 EHBP1 (ENSMMSG00000008127) #37 TMEM17 (ENSMMSG00000008258) ENSMMSG00000008292 Bovidae ANCESTRAL SPECIES 5 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Caprinae ANCESTRAL SPECIES 9 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147214 #20 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00940000154186.a #27 ENSGT00940000155337.h #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.i #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956.w Rambouillet Sheep MODERN SPECIES 19 APLF (ENSOARG00020007769) #10 PROKR1 (ENSOARG00020007957) #8 FBXO48 (ENSOARG00020007981) #11 PLEK (ENSOARG00020000213) #12 CNRIP1 (ENSOARG00020000300) #13 PPP3R1 (ENSOARG00020000338) PNO1 (ENSOARG00020000405) #14 DNAAF10 (ENSOARG00020000424) #15 C1D (ENSOARG00020000448) #16 ETAA1 (ENSOARG00020000471) #17 MEIS1 (ENSOARG00020000528) #18 ENSOARG00020000610 SPRED2 (ENSOARG00020000634) #19 ACTR2 (ENSOARG00020000701) #21 ENSOARG00020000747 RAB1A (ENSOARG00020000781) #22 SLC1A4 (ENSOARG00020000870) #24 ENSOARG00020000886 SERTAD2 (ENSOARG00020000894) #25 LGALSL (ENSOARG00020000922) #28 PELI1 (ENSOARG00020000937) #29 ENSOARG00020000952 VPS54 (ENSOARG00020000984) #30 UGP2 (ENSOARG00020001100) #31 MDH1 (ENSOARG00020001156) #34 WDPCP (ENSOARG00020001233) #35 OTX1 (ENSOARG00020001249) #36 EHBP1 (ENSOARG00020001291) #37 TMEM17 (ENSOARG00020001441) B3GNT2 (ENSOARG00020001451) COMMD1 (ENSOARG00020001461) Goat MODERN SPECIES 2 ARHGAP25 (ENSCHIG00000025694) #7 PROKR1 (ENSCHIG00000015056) #8 APLF (ENSCHIG00000015145) #10 FBXO48 (ENSCHIG00000018110) #11 PLEK (ENSCHIG00000017674) #12 CNRIP1 (ENSCHIG00000017116) #13 PPP3R1 (ENSCHIG00000004688) PNO1 (ENSCHIG00000012839) #14 DNAAF10 (ENSCHIG00000022762) #15 C1D (ENSCHIG00000025729) #16 ETAA1 (ENSCHIG00000027011) #17 MEIS1 (ENSCHIG00000027207) #18 SPRED2 (ENSCHIG00000013086) #19 ENSCHIG00000027162 #20 ACTR2 (ENSCHIG00000014272) #21 RAB1A (ENSCHIG00000014060) #22 CEP68 (ENSCHIG00000025433) #23 SLC1A4 (ENSCHIG00000025336) #24 ENSCHIG00000007620 AFTPH (ENSCHIG00000009404) #27 LGALSL (ENSCHIG00000026638) #28 PELI1 (ENSCHIG00000022027) #29 ENSCHIG00000003100 VPS54 (ENSCHIG00000010990) #30 UGP2 (ENSCHIG00000021810) #31 ENSCHIG00000015525 #34 WDPCP (ENSCHIG00000018963) #35 OTX1 (ENSCHIG00000017955) #36 EHBP1 (ENSCHIG00000013762) #37 TMEM17 (ENSCHIG00000012499) B3GNT2 (ENSCHIG00000009561) Bovinae ANCESTRAL SPECIES 4 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 American bison MODERN SPECIES 3346 MEIS1 (ENSBBBG00000000788) #18 SPRED2 (ENSBBBG00000003896) #19 ENSBBBG00000003899 #21 RAB1A (ENSBBBG00000015620) #22 CEP68 (ENSBBBG00000015639) #23 SLC1A4 (ENSBBBG00000003906) #24 AFTPH (ENSBBBG00000015672) #27 LGALSL (ENSBBBG00000003917) #28 PELI1 (ENSBBBG00000015700) #29 VPS54 (ENSBBBG00000015810) #30 UGP2 (ENSBBBG00000015846) #31 MDH1 (ENSBBBG00000015910) #34 WDPCP (ENSBBBG00000015935) #35 OTX1 (ENSBBBG00000015949) #36 EHBP1 (ENSBBBG00000016143) #37 TMEM17 (ENSBBBG00000016175) ENSBBBG00000016179 B3GNT2 (ENSBBBG00000000770) COMMD1 (ENSBBBG00000016189) Bos ANCESTRAL SPECIES 5 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.ib #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000011179.o.a ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.ib #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000011179.o.a ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Wild yak MODERN SPECIES 577 DNAAF10 (ENSBMUG00000020199) #15 C1D (ENSBMUG00000020190) #16 ETAA1 (ENSBMUG00000020179) #17 MEIS1 (ENSBMUG00000020154) #18 SPRED2 (ENSBMUG00000020108) #19 ENSBMUG00000020074 #21 RAB1A (ENSBMUG00000020049) #22 CEP68 (ENSBMUG00000020034) #23 SLC1A4 (ENSBMUG00000019988) #24 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 28 ARHGAP25 (ENSBGRG00000003917) #7 PROKR1 (ENSBGRG00000003888) #8 APLF (ENSBGRG00000003735) #10 FBXO48 (ENSBGRG00000003679) #11 PLEK (ENSBGRG00000003648) #12 CNRIP1 (ENSBGRG00000003591) #13 PNO1 (ENSBGRG00000003558) #14 DNAAF10 (ENSBGRG00000013337) #15 C1D (ENSBGRG00000013288) #16 ENSBGRG00000013266 ETAA1 (ENSBGRG00000013146) #17 ENSBGRG00000013128 MEIS1 (ENSBGRG00000012913) #18 SPRED2 (ENSBGRG00000012585) #19 ACTR2 (ENSBGRG00000012280) #21 RAB1A (ENSBGRG00000012081) #22 CEP68 (ENSBGRG00000011823) #23 SLC1A4 (ENSBGRG00000011713) #24 SERTAD2 (ENSBGRG00000011678) #25 AFTPH (ENSBGRG00000011500) #27 ENSBGRG00000011374 #28 PELI1 (ENSBGRG00000011236) #29 VPS54 (ENSBGRG00000010687) #30 UGP2 (ENSBGRG00000010367) #31 ENSBGRG00000010353 MDH1 (ENSBGRG00000010198) #34 MRPS24 (ENSBGRG00000010129) WDPCP (ENSBGRG00000009982) #35 OTX1 (ENSBGRG00000009943) #36 ENSBGRG00000009929 TMEM17 (ENSBGRG00000009894) Domestic yak MODERN SPECIES 21 ENSBGRG00000026218 ENSBGRG00000026212 ENSBGRG00000025956 ZNRD2 (ENSBGRG00000025363) FAM89B (ENSBGRG00000025353) RNASEH2C (ENSBGRG00000021602) ENSBGRG00000021054 MUS81 (ENSBGRG00000020712) ENSBGRG00000020304 ENSBGRG00000020279 DRAP1 (ENSBGRG00000019562) EIF1AD (ENSBGRG00000018641) ENSBGRG00000018549 ENSBGRG00000018507 ENSBGRG00000025729 ENSBGRG00000025717 #22 ENSBGRG00000025701 CNIH2 (ENSBGRG00000025680) YIF1A (ENSBGRG00000025666) ENSBGRG00000025656 ENSBGRG00000023725 CCS (ENSBGRG00000022678) ENSBGRG00000022563 ENSBGRG00000022387 ENSBGRG00000022112 ENSBGRG00000021808 ENSBGRG00000019717 ENSBGRG00000018673 ENSBGRG00000018373 PPP1CA (ENSBGRG00000017991) CORO1B (ENSBGRG00000014832) Bos_b ANCESTRAL SPECIES 16 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556.ib #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000011179.o.a ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Cow MODERN SPECIES 2 BMP10 (ENSBTAG00000000992) ARHGAP25 (ENSBTAG00000023976) #7 PROKR1 (ENSBTAG00000050333) #8 APLF (ENSBTAG00000018401) #10 FBXO48 (ENSBTAG00000047772) #11 PLEK (ENSBTAG00000009658) #12 CNRIP1 (ENSBTAG00000001408) #13 PPP3R1 (ENSBTAG00000010619) PNO1 (ENSBTAG00000010604) #14 DNAAF10 (ENSBTAG00000010595) #15 C1D (ENSBTAG00000049002) #16 ETAA1 (ENSBTAG00000011727) #17 MEIS1 (ENSBTAG00000008448) #18 SPRED2 (ENSBTAG00000019456) #19 ACTR2 (ENSBTAG00000009761) #21 RAB1A (ENSBTAG00000016720) #22 CEP68 (ENSBTAG00000016717) #23 SLC1A4 (ENSBTAG00000007763) #24 ENSBTAG00000050435 SERTAD2 (ENSBTAG00000049341) #25 AFTPH (ENSBTAG00000009299) #27 LGALSL (ENSBTAG00000055296) #28 ENSBTAG00000053585 PELI1 (ENSBTAG00000020865) #29 VPS54 (ENSBTAG00000000115) #30 UGP2 (ENSBTAG00000000111) #31 MDH1 (ENSBTAG00000019295) #34 ENSBTAG00000023318 WDPCP (ENSBTAG00000005151) #35 OTX1 (ENSBTAG00000006760) #36 EHBP1 (ENSBTAG00000044173) #37 Hybrid Bos Indicus MODERN SPECIES 2 APLF (ENSBIXG00005008315) #10 FBXO48 (ENSBIXG00005008327) #11 PLEK (ENSBIXG00005008346) #12 ENSBIXG00005008358 ENSBIXG00005000174 #13 PNO1 (ENSBIXG00005000175) #14 DNAAF10 (ENSBIXG00005008434) #15 C1D (ENSBIXG00005000197) #16 ETAA1 (ENSBIXG00005008485) #17 MEIS1 (ENSBIXG00005000216) #18 SPRED2 (ENSBIXG00005000234) #19 ACTR2 (ENSBIXG00005008678) #21 CEP68 (ENSBIXG00005006085) #23 SLC1A4 (ENSBIXG00005008778) #24 ENSBIXG00005008797 RAB1A (ENSBIXG00005000282) #22 SERTAD2 (ENSBIXG00005008870) #25 AFTPH (ENSBIXG00005008912) #27 ENSBIXG00005008944 #28 PELI1 (ENSBIXG00005008978) #29 VPS54 (ENSBIXG00005009062) #30 UGP2 (ENSBIXG00005009159) #31 MDH1 (ENSBIXG00005009206) #34 MRPS24 (ENSBIXG00005000425) WDPCP (ENSBIXG00005009244) #35 OTX1 (ENSBIXG00005009282) #36 ENSBIXG00005005799 EHBP1 (ENSBIXG00005000484) #37 TMEM17 (ENSBIXG00005000490) B3GNT2 (ENSBIXG00005005908) COMMD1 (ENSBIXG00005009417) Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Chiroptera ANCESTRAL SPECIES 10 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Greater horseshoe bat MODERN SPECIES 4 PROKR1 (ENSRFEG00010006533) #8 APLF (ENSRFEG00010006577) #10 FBXO48 (ENSRFEG00010006636) #11 PLEK (ENSRFEG00010006661) #12 CNRIP1 (ENSRFEG00010006735) #13 PPP3R1 (ENSRFEG00010006792) PNO1 (ENSRFEG00010006896) #14 DNAAF10 (ENSRFEG00010006949) #15 ENSRFEG00010007018 #16 ETAA1 (ENSRFEG00010007107) #17 MEIS1 (ENSRFEG00010007165) #18 ENSRFEG00010007383 SPRED2 (ENSRFEG00010007454) #19 ACTR2 (ENSRFEG00010007536) #21 ENSRFEG00010007617 RAB1A (ENSRFEG00010007659) #22 CEP68 (ENSRFEG00010007746) #23 SLC1A4 (ENSRFEG00010007793) #24 SERTAD2 (ENSRFEG00010007864) #25 AFTPH (ENSRFEG00010007890) #27 LGALSL (ENSRFEG00010007948) #28 PELI1 (ENSRFEG00010008007) #29 VPS54 (ENSRFEG00010008048) #30 UGP2 (ENSRFEG00010008438) #31 MDH1 (ENSRFEG00010008617) #34 WDPCP (ENSRFEG00010008801) #35 OTX1 (ENSRFEG00010008915) #36 EHBP1 (ENSRFEG00010008993) #37 TMEM17 (ENSRFEG00010009150) ENSRFEG00010009180 ENSRFEG00010009225 Microbat MODERN SPECIES 943 SPRED2 (ENSMLUG00000005236) #19 ACTR2 (ENSMLUG00000005227) #21 RAB1A (ENSMLUG00000009489) #22 CEP68 (ENSMLUG00000002435) #23 SLC1A4 (ENSMLUG00000002430) #24 SERTAD2 (ENSMLUG00000013854) #25 AFTPH (ENSMLUG00000008012) #27 LGALSL (ENSMLUG00000008001) #28 ENSMLUG00000015944 PELI1 (ENSMLUG00000003152) #29 VPS54 (ENSMLUG00000003130) #30 UGP2 (ENSMLUG00000003123) #31 MDH1 (ENSMLUG00000002352) #34 WDPCP (ENSMLUG00000002336) #35 OTX1 (ENSMLUG00000002330) #36 EHBP1 (ENSMLUG00000002314) #37 ENSMLUG00000027762 B3GNT2 (ENSMLUG00000009924) Equus ANCESTRAL SPECIES 7 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Donkey MODERN SPECIES 26 BMP10 (ENSEASG00005036298) ARHGAP25 (ENSEASG00005007316) #7 PROKR1 (ENSEASG00005028856) #8 APLF (ENSEASG00005007314) #10 FBXO48 (ENSEASG00005007313) #11 PLEK (ENSEASG00005007312) #12 CNRIP1 (ENSEASG00005030124) #13 ENSEASG00005007310 PNO1 (ENSEASG00005007309) #14 DNAAF10 (ENSEASG00005007308) #15 C1D (ENSEASG00005033257) #16 ETAA1 (ENSEASG00005007305) #17 MEIS1 (ENSEASG00005007304) #18 SPRED2 (ENSEASG00005027956) #19 ACTR2 (ENSEASG00005007299) #21 RAB1A (ENSEASG00005034669) #22 CEP68 (ENSEASG00005007297) #23 SLC1A4 (ENSEASG00005007296) #24 ENSEASG00005035148 SERTAD2 (ENSEASG00005026993) #25 AFTPH (ENSEASG00005007290) #27 LGALSL (ENSEASG00005007283) #28 PELI1 (ENSEASG00005007279) #29 VPS54 (ENSEASG00005007268) #30 UGP2 (ENSEASG00005007264) #31 MDH1 (ENSEASG00005007262) #34 WDPCP (ENSEASG00005007245) #35 OTX1 (ENSEASG00005007243) #36 EHBP1 (ENSEASG00005007241) #37 TMEM17 (ENSEASG00005031233) B3GNT2 (ENSEASG00005032411) Horse MODERN SPECIES 6 BMP10 (ENSECAG00000007670) ARHGAP25 (ENSECAG00000009153) #7 PROKR1 (ENSECAG00000031648) #8 ENSECAG00000028191 APLF (ENSECAG00000013246) #10 FBXO48 (ENSECAG00000018966) #11 PLEK (ENSECAG00000018996) #12 PPP3R1 (ENSECAG00000009627) PNO1 (ENSECAG00000011263) #14 ENSECAG00000057082 C1D (ENSECAG00000002187) #16 ETAA1 (ENSECAG00000006358) #17 MEIS1 (ENSECAG00000009387) #18 SPRED2 (ENSECAG00000005881) #19 ACTR2 (ENSECAG00000009219) #21 RAB1A (ENSECAG00000009926) #22 CEP68 (ENSECAG00000009985) #23 SLC1A4 (ENSECAG00000011229) #24 SERTAD2 (ENSECAG00000040555) #25 AFTPH (ENSECAG00000012175) #27 LGALSL (ENSECAG00000018099) #28 PELI1 (ENSECAG00000021804) #29 VPS54 (ENSECAG00000022920) #30 UGP2 (ENSECAG00000016705) #31 WDPCP (ENSECAG00000019956) #35 MDH1 (ENSECAG00000010849) #34 OTX1 (ENSECAG00000024462) #36 EHBP1 (ENSECAG00000009318) #37 TMEM17 (ENSECAG00000015697) ENSECAG00000032544 B3GNT2 (ENSECAG00000016959) Carnivora ANCESTRAL SPECIES 19 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Caniformia ANCESTRAL SPECIES 18 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Mustelinae ANCESTRAL SPECIES 16 ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Ferret MODERN SPECIES 169 GKN2 (ENSMPUG00000006320) BMP10 (ENSMPUG00000006313) ARHGAP25 (ENSMPUG00000006303) #7 PROKR1 (ENSMPUG00000006297) #8 APLF (ENSMPUG00000006285) #10 PLEK (ENSMPUG00000006274) #12 CNRIP1 (ENSMPUG00000006263) #13 PPP3R1 (ENSMPUG00000006250) ENSMPUG00000006244 #14 DNAAF10 (ENSMPUG00000006235) #15 C1D (ENSMPUG00000006224) #16 ETAA1 (ENSMPUG00000006214) #17 MEIS1 (ENSMPUG00000006198) #18 SPRED2 (ENSMPUG00000006186) #19 ACTR2 (ENSMPUG00000006176) #21 RAB1A (ENSMPUG00000006139) #22 CEP68 (ENSMPUG00000006108) #23 SLC1A4 (ENSMPUG00000006098) #24 ENSMPUG00000006094 ENSMPUG00000006090 SERTAD2 (ENSMPUG00000018821) #25 AFTPH (ENSMPUG00000006081) #27 LGALSL (ENSMPUG00000006075) #28 ENSMPUG00000006072 PELI1 (ENSMPUG00000006068) #29 VPS54 (ENSMPUG00000006057) #30 UGP2 (ENSMPUG00000005966) #31 ENSMPUG00000005940 MDH1 (ENSMPUG00000005929) #34 WDPCP (ENSMPUG00000005918) #35 ENSMPUG00000005912 Ursidae ANCESTRAL SPECIES 9 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c.x ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.p #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Giant Panda MODERN SPECIES 14 APLF (ENSAMEG00000000409) #10 ENSAMEG00000029506 #11 PLEK (ENSAMEG00000004920) #12 CNRIP1 (ENSAMEG00000004912) #13 PPP3R1 (ENSAMEG00000027372) PNO1 (ENSAMEG00000004897) #14 DNAAF10 (ENSAMEG00000004868) #15 C1D (ENSAMEG00000004859) #16 ETAA1 (ENSAMEG00000015785) #17 MEIS1 (ENSAMEG00000015779) #18 ENSAMEG00000029782 ENSAMEG00000015767 #19 ENSAMEG00000015749 #21 ENSAMEG00000024763 ENSAMEG00000031136 RAB1A (ENSAMEG00000026261) #22 CEP68 (ENSAMEG00000001121) #23 SLC1A4 (ENSAMEG00000001092) #24 SERTAD2 (ENSAMEG00000028964) #25 AFTPH (ENSAMEG00000001080) #27 LGALSL (ENSAMEG00000027975) #28 PELI1 (ENSAMEG00000001167) #29 ENSAMEG00000027202 MDH1 (ENSAMEG00000005414) #34 WDPCP (ENSAMEG00000005449) #35 OTX1 (ENSAMEG00000026277) #36 EHBP1 (ENSAMEG00000005488) #37 TMEM17 (ENSAMEG00000005503) B3GNT2 (ENSAMEG00000005508) COMMD1 (ENSAMEG00000008249) CCT4 (ENSAMEG00000003530) Ursus ANCESTRAL SPECIES 20 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c.x ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a.p #34 ENSGT00390000009819.a.a.o ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Polar bear MODERN SPECIES 223 ARHGAP25 (ENSUMAG00000021168) #7 PROKR1 (ENSUMAG00000021155) #8 APLF (ENSUMAG00000021151) #10 FBXO48 (ENSUMAG00000021148) #11 PLEK (ENSUMAG00000021146) #12 CNRIP1 (ENSUMAG00000021144) #13 PPP3R1 (ENSUMAG00000021129) PNO1 (ENSUMAG00000021126) #14 DNAAF10 (ENSUMAG00000021123) #15 C1D (ENSUMAG00000021118) #16 ETAA1 (ENSUMAG00000021106) #17 MEIS1 (ENSUMAG00000021098) #18 SPRED2 (ENSUMAG00000021053) #19 ACTR2 (ENSUMAG00000021042) #21 ENSUMAG00000021041 RAB1A (ENSUMAG00000021038) #22 CEP68 (ENSUMAG00000021035) #23 SLC1A4 (ENSUMAG00000021032) #24 ENSUMAG00000021019 #26 AFTPH (ENSUMAG00000021014) #27 LGALSL (ENSUMAG00000021007) #28 PELI1 (ENSUMAG00000021002) #29 VPS54 (ENSUMAG00000020982) #30 UGP2 (ENSUMAG00000020975) #31 MDH1 (ENSUMAG00000020965) #34 ENSUMAG00000020964 WDPCP (ENSUMAG00000020957) #35 ENSUMAG00000020944 #36 EHBP1 (ENSUMAG00000020940) #37 TMEM17 (ENSUMAG00000020931) B3GNT2 (ENSUMAG00000020928) American black bear MODERN SPECIES 6107 RAB1A (ENSUAMG00000014617) #22 CEP68 (ENSUAMG00000014614) #23 SLC1A4 (ENSUAMG00000014611) #24 Canidae ANCESTRAL SPECIES 10 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00390000017839.o.a ENSGT00940000156327 #18 ENSGT00950000183164.E.c.b.b ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 Red fox MODERN SPECIES 141 PLEK (ENSVVUG00000027643) #12 ENSVVUG00000027638 PPP3R1 (ENSVVUG00000027635) PNO1 (ENSVVUG00000027634) #14 WDR92 (ENSVVUG00000027632) #15 C1D (ENSVVUG00000027629) #16 ETAA1 (ENSVVUG00000027624) #17 ENSVVUG00000027618 MEIS1 (ENSVVUG00000027610) #18 ENSVVUG00000027601 SPRED2 (ENSVVUG00000027600) #19 ACTR2 (ENSVVUG00000027598) #21 ENSVVUG00000027596 ENSVVUG00000027593 ENSVVUG00000027592 RAB1A (ENSVVUG00000027588) #22 CEP68 (ENSVVUG00000027585) #23 SLC1A4 (ENSVVUG00000027576) #24 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00950000183010.a.a.a.a.c.b.d.a.a ENSGT00390000009597 #17 ENSGT00390000017839.o.a ENSGT00940000156327 #18 ENSGT00950000183164.E.c.b.b ENSGT00940000156841 #19 ENSGT00910000147398 ENSGT00940000154556 #21 ENSGT00390000017004.a.a.q.a ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000154546 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 Dingo MODERN SPECIES 307 CNRIP1 (ENSCAFG00020000090) #13 PPP3R1 (ENSCAFG00020027004) PNO1 (ENSCAFG00020027002) #14 DNAAF10 (ENSCAFG00020026999) #15 C1D (ENSCAFG00020026997) #16 ENSCAFG00020026995 ETAA1 (ENSCAFG00020026994) #17 ENSCAFG00020026992 MEIS1 (ENSCAFG00020026989) #18 ENSCAFG00020026987 ENSCAFG00020026985 SPRED2 (ENSCAFG00020026983) #19 ENSCAFG00020026981 ACTR2 (ENSCAFG00020026978) #21 ENSCAFG00020026973 RAB1A (ENSCAFG00020026971) #22 CEP68 (ENSCAFG00020026969) #23 SLC1A4 (ENSCAFG00020026962) #24 AFTPH (ENSCAFG00020026953) #27 LGALSL (ENSCAFG00020026947) #28 PELI1 (ENSCAFG00020026939) #29 VPS54 (ENSCAFG00020026938) #30 UGP2 (ENSCAFG00020026936) #31 MDH1 (ENSCAFG00020026933) #34 ENSCAFG00020026931 ENSCAFG00020026930 WDPCP (ENSCAFG00020026927) #35 OTX1 (ENSCAFG00020026926) #36 EHBP1 (ENSCAFG00020026924) #37 TMEM17 (ENSCAFG00020026923) B3GNT2 (ENSCAFG00020026921) Dog MODERN SPECIES 1 PLEK (ENSCAFG00845023363) #12 CNRIP1 (ENSCAFG00845023282) #13 PPP3R1 (ENSCAFG00845022977) PNO1 (ENSCAFG00845022894) #14 WDR92 (ENSCAFG00845022818) #15 WDR92 (ENSCAFG00845022766) #16 ENSCAFG00845022735 ETAA1 (ENSCAFG00845022577) #17 ENSCAFG00845022346 MEIS1 (ENSCAFG00845022164) #18 ENSCAFG00845022112 SPRED2 (ENSCAFG00845022023) #19 ACTR2 (ENSCAFG00845021843) #21 ENSCAFG00845021409 ENSCAFG00845021343 RAB1A (ENSCAFG00845021139) #22 CEP68 (ENSCAFG00845021026) #23 SLC1A4 (ENSCAFG00845020925) #24 AFTPH (ENSCAFG00845020600) #27 ENSCAFG00845020543 LGALSL (ENSCAFG00845020462) #28 PELI1 (ENSCAFG00845020350) #29 VPS54 (ENSCAFG00845019815) #30 UGP2 (ENSCAFG00845019476) #31 MDH1 (ENSCAFG00845019026) #34 ENSCAFG00845018885 ENSCAFG00845018841 WDPCP (ENSCAFG00845018266) #35 OTX1 (ENSCAFG00845018084) #36 EHBP1 (ENSCAFG00845017216) #37 TMEM17 (ENSCAFG00845016745) Felidae ANCESTRAL SPECIES 3 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.o.a #16 ENSGT00390000016292.i.a.f ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00950000183164.E.c.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 #19 ENSGT00960000190724 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Cat MODERN SPECIES 2 PLEK (ENSFCAG00000009426) #12 ENSFCAG00000052333 PPP3R1 (ENSFCAG00000033294) PNO1 (ENSFCAG00000041028) #14 DNAAF10 (ENSFCAG00000027122) #15 C1D (ENSFCAG00000028933) #16 ENSFCAG00000028962 ETAA1 (ENSFCAG00000026219) #17 MEIS1 (ENSFCAG00000036549) #18 ENSFCAG00000037094 ENSFCAG00000028286 SPRED2 (ENSFCAG00000004962) #19 ENSFCAG00000051060 ACTR2 (ENSFCAG00000004960) #21 ENSFCAG00000014868 RAB1A (ENSFCAG00000002536) #22 CEP68 (ENSFCAG00000030849) #23 SLC1A4 (ENSFCAG00000001506) #24 SERTAD2 (ENSFCAG00000002492) #25 AFTPH (ENSFCAG00000028719) #27 ENSFCAG00000045546 #28 PELI1 (ENSFCAG00000030163) #29 VPS54 (ENSFCAG00000008259) #30 UGP2 (ENSFCAG00000018580) #31 MDH1 (ENSFCAG00000024183) #34 WDPCP (ENSFCAG00000006657) #35 OTX1 (ENSFCAG00000044742) #36 EHBP1 (ENSFCAG00000026831) #37 TMEM17 (ENSFCAG00000046240) B3GNT2 (ENSFCAG00000009061) COMMD1 (ENSFCAG00000027737) Panthera ANCESTRAL SPECIES 2 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.o.a #16 ENSGT00390000016292.i.a.f ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00950000183164.E.c.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337.f #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00940000163647 ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405.o.a #16 ENSGT00390000016292.i.a.f ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00950000183164.E.c.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000164277 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337.f #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 leopard MODERN SPECIES PLEK (ENSPPRG00000014845) #12 CNRIP1 (ENSPPRG00000014986) #13 ENSPPRG00000015005 PPP3R1 (ENSPPRG00000015164) PNO1 (ENSPPRG00000015494) #14 DNAAF10 (ENSPPRG00000015515) #15 ENSPPRG00000017045 #16 ENSPPRG00000020640 ETAA1 (ENSPPRG00000017171) #17 MEIS1 (ENSPPRG00000018537) #18 ENSPPRG00000020658 ENSPPRG00000020632 SPRED2 (ENSPPRG00000020675) #19 ACTR2 (ENSPPRG00000020870) #21 ENSPPRG00000021550 RAB1A (ENSPPRG00000025077) #22 CEP68 (ENSPPRG00000025073) #23 SLC1A4 (ENSPPRG00000025070) #24 SERTAD2 (ENSPPRG00000020703) #25 ENSPPRG00000025068 #26 AFTPH (ENSPPRG00000025039) #27 ENSPPRG00000025036 #28 PELI1 (ENSPPRG00000025026) #29 VPS54 (ENSPPRG00000025012) #30 UGP2 (ENSPPRG00000024974) #31 ENSPPRG00000024948 #34 WDPCP (ENSPPRG00000024890) #35 OTX1 (ENSPPRG00000024867) #36 EHBP1 (ENSPPRG00000024840) #37 TMEM17 (ENSPPRG00000024820) ENSPPRG00000024813 lion MODERN SPECIES 3 FBXO48 (ENSPLOG00000013995) #11 PLEK (ENSPLOG00000014035) #12 CNRIP1 (ENSPLOG00000014131) #13 PPP3R1 (ENSPLOG00000014231) ENSPLOG00000014345 PNO1 (ENSPLOG00000014368) #14 DNAAF10 (ENSPLOG00000014401) #15 C1D (ENSPLOG00000014545) #16 ENSPLOG00000014602 ETAA1 (ENSPLOG00000014630) #17 MEIS1 (ENSPLOG00000014760) #18 ENSPLOG00000015010 SPRED2 (ENSPLOG00000015039) #19 ACTR2 (ENSPLOG00000015113) #21 ENSPLOG00000015344 RAB1A (ENSPLOG00000015420) #22 CEP68 (ENSPLOG00000015547) #23 SLC1A4 (ENSPLOG00000015581) #24 SERTAD2 (ENSPLOG00000000111) #25 AFTPH (ENSPLOG00000000129) #27 LGALSL (ENSPLOG00000000160) #28 PELI1 (ENSPLOG00000000230) #29 VPS54 (ENSPLOG00000000305) #30 UGP2 (ENSPLOG00000000363) #31 MDH1 (ENSPLOG00000000419) #34 WDPCP (ENSPLOG00000000468) #35 OTX1 (ENSPLOG00000000484) #36 EHBP1 (ENSPLOG00000000545) #37 TMEM17 (ENSPLOG00000000647) B3GNT2 (ENSPLOG00000000672) COMMD1 (ENSPLOG00000000685) Tiger MODERN SPECIES 56 MEIS1 (ENSPTIG00000008411) #18 ENSPTIG00000010083 SPRED2 (ENSPTIG00000010714) #19 ACTR2 (ENSPTIG00000011973) #21 RAB1A (ENSPTIG00000013471) #22 CEP68 (ENSPTIG00000014965) #23 ENSPTIG00000016054 #24 SERTAD2 (ENSPTIG00000006044) #25 AFTPH (ENSPTIG00000016879) #27 ENSPTIG00000000654 #26 ENSPTIG00000003080 #28 PELI1 (ENSPTIG00000005767) #29 VPS54 (ENSPTIG00000007451) #30 UGP2 (ENSPTIG00000012159) #31 MDH1 (ENSPTIG00000015287) #34 WDPCP (ENSPTIG00000018461) #35 OTX1 (ENSPTIG00000021186) #36 EHBP1 (ENSPTIG00000005411) #37 TMEM17 (ENSPTIG00000007396) B3GNT2 (ENSPTIG00000006426) Atlantogenata ANCESTRAL SPECIES 43 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Afrotheria ANCESTRAL SPECIES 46 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Tenrec MODERN SPECIES 1680 RAB1A (ENSETEG00000002205) #22 CEP68 (ENSETEG00000002203) #23 SLC1A4 (ENSETEG00000002198) #24 Afrotheria_a ANCESTRAL SPECIES 45 ENSGT00940000156279 ENSGT00950000183015.A #7 ENSGT00940000154544.a #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Elephant MODERN SPECIES 278 BMP10 (ENSLAFG00000001659) ARHGAP25 (ENSLAFG00000016192) #7 PROKR1 (ENSLAFG00000012008) #8 APLF (ENSLAFG00000011551) #10 FBXO48 (ENSLAFG00000026127) #11 PLEK (ENSLAFG00000005718) #12 CNRIP1 (ENSLAFG00000006280) #13 PPP3R1 (ENSLAFG00000022682) PNO1 (ENSLAFG00000000046) #14 DNAAF10 (ENSLAFG00000000042) #15 C1D (ENSLAFG00000002083) #16 ETAA1 (ENSLAFG00000009209) #17 MEIS1 (ENSLAFG00000003445) #18 SPRED2 (ENSLAFG00000000394) #19 ACTR2 (ENSLAFG00000010273) #21 RAB1A (ENSLAFG00000016666) #22 CEP68 (ENSLAFG00000029833) #23 SLC1A4 (ENSLAFG00000017358) #24 SERTAD2 (ENSLAFG00000032288) #25 AFTPH (ENSLAFG00000007172) #27 LGALSL (ENSLAFG00000018660) #28 PELI1 (ENSLAFG00000010471) #29 VPS54 (ENSLAFG00000021799) #30 UGP2 (ENSLAFG00000000399) #31 MDH1 (ENSLAFG00000016504) #34 ENSLAFG00000025584 #35 ENSLAFG00000016497 OTX1 (ENSLAFG00000028656) #36 TMEM17 (ENSLAFG00000005803) ENSLAFG00000005807 DCUN1D2 (ENSLAFG00000005808) Hyrax MODERN SPECIES 434 RAB1A (ENSPCAG00000002464) #22 CEP68 (ENSPCAG00000002434) #23 Xenarthra ANCESTRAL SPECIES 1260 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 Armadillo MODERN SPECIES 2796 SPRED2 (ENSDNOG00000032098) #19 ACTR2 (ENSDNOG00000037152) #21 RAB1A (ENSDNOG00000018236) #22 CEP68 (ENSDNOG00000043258) #23 Sloth MODERN SPECIES 623 RAB1A (ENSCHOG00000005071) #22 CEP68 (ENSCHOG00000005060) #23 Marsupialia ANCESTRAL SPECIES 19 ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Opossum MODERN SPECIES ENSMODG00000003679 #10 ENSMODG00000043880 FBXO48 (ENSMODG00000023128) #11 PLEK (ENSMODG00000003654) #12 CNRIP1 (ENSMODG00000042412) #13 PPP3R1 (ENSMODG00000003614) ENSMODG00000003621 PNO1 (ENSMODG00000003567) #14 DNAAF10 (ENSMODG00000003598) #15 C1D (ENSMODG00000003561) #16 ENSMODG00000003554 #17 MEIS1 (ENSMODG00000003396) #18 SPRED2 (ENSMODG00000003380) #19 ACTR2 (ENSMODG00000003364) #21 ENSMODG00000047741 RAB1A (ENSMODG00000003340) #22 ENSMODG00000003315 #23 SLC1A4 (ENSMODG00000003310) #24 SERTAD2 (ENSMODG00000023126) #25 AFTPH (ENSMODG00000003235) #27 ENSMODG00000047159 #26 ENSMODG00000003226 #28 PELI1 (ENSMODG00000003212) #29 VPS54 (ENSMODG00000003191) #30 ENSMODG00000003102 #31 ENSMODG00000038904 MDH1 (ENSMODG00000003073) #34 WDPCP (ENSMODG00000003049) #35 ENSMODG00000038398 OTX1 (ENSMODG00000037978) #36 EHBP1 (ENSMODG00000002986) #37 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000026511 ENSSHAG00000029265 #8 ENSSHAG00000002327 #10 PLEK (ENSSHAG00000001830) #12 FBXO48 (ENSSHAG00000004078) #11 CNRIP1 (ENSSHAG00000030089) #13 PPP3R1 (ENSSHAG00000006122) PNO1 (ENSSHAG00000007326) #14 DNAAF10 (ENSSHAG00000007449) #15 C1D (ENSSHAG00000020536) #16 ENSSHAG00000012254 ENSSHAG00000013030 #17 MEIS1 (ENSSHAG00000016546) #18 SPRED2 (ENSSHAG00000030799) #19 ACTR2 (ENSSHAG00000000220) #21 RAB1A (ENSSHAG00000027574) #22 ENSSHAG00000004687 #23 SLC1A4 (ENSSHAG00000029893) #24 SERTAD2 (ENSSHAG00000022880) #25 ENSSHAG00000028826 #26 AFTPH (ENSSHAG00000010633) #27 LGALSL (ENSSHAG00000026611) #28 PELI1 (ENSSHAG00000024330) #29 VPS54 (ENSSHAG00000000961) #30 UGP2 (ENSSHAG00000003089) #31 MDH1 (ENSSHAG00000008365) #34 WDPCP (ENSSHAG00000009447) #35 OTX1 (ENSSHAG00000011389) #36 EHBP1 (ENSSHAG00000011490) #37 TMEM17 (ENSSHAG00000014235) COMMD1 (ENSSHAG00000005803) Diprotodontia ANCESTRAL SPECIES 2 ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Common wonbat MODERN SPECIES 1017 C2orf50 (ENSVURG00010012553) ENSVURG00010012564 #8 ENSVURG00010012569 #10 FBXO48 (ENSVURG00010012574) #11 PLEK (ENSVURG00010012588) #12 CNRIP1 (ENSVURG00010012599) #13 PPP3R1 (ENSVURG00010012603) PNO1 (ENSVURG00010012614) #14 DNAAF10 (ENSVURG00010012624) #15 C1D (ENSVURG00010012637) #16 ENSVURG00010012656 #17 ENSVURG00010012665 MEIS1 (ENSVURG00010012689) #18 SPRED2 (ENSVURG00010012998) #19 ACTR2 (ENSVURG00010013014) #21 RAB1A (ENSVURG00010013043) #22 ENSVURG00010013094 #23 SLC1A4 (ENSVURG00010013104) #24 SERTAD2 (ENSVURG00010013124) #25 AFTPH (ENSVURG00010013132) #27 ENSVURG00010013145 #26 LGALSL (ENSVURG00010013162) #28 PELI1 (ENSVURG00010013173) #29 VPS54 (ENSVURG00010013192) #30 UGP2 (ENSVURG00010013228) #31 MDH1 (ENSVURG00010013259) #34 WDPCP (ENSVURG00010013315) #35 ENSVURG00010013329 OTX1 (ENSVURG00010013336) #36 EHBP1 (ENSVURG00010013361) #37 TMEM17 (ENSVURG00010013563) koala MODERN SPECIES 20 SLC66A3 (ENSPCIG00000018608) C2orf50 (ENSPCIG00000018610) ENSPCIG00000018616 #8 ENSPCIG00000018618 #10 FBXO48 (ENSPCIG00000018620) #11 PLEK (ENSPCIG00000018623) #12 CNRIP1 (ENSPCIG00000037069) #13 PPP3R1 (ENSPCIG00000018625) PNO1 (ENSPCIG00000018626) #14 DNAAF10 (ENSPCIG00000018627) #15 ENSPCIG00000018629 #16 ENSPCIG00000016961 #17 MEIS1 (ENSPCIG00000006632) #18 SPRED2 (ENSPCIG00000035990) #19 ACTR2 (ENSPCIG00000023217) #21 RAB1A (ENSPCIG00000023212) #22 ENSPCIG00000023208 #23 SLC1A4 (ENSPCIG00000023205) #24 SERTAD2 (ENSPCIG00000025805) #25 AFTPH (ENSPCIG00000025802) #27 ENSPCIG00000025803 #26 LGALSL (ENSPCIG00000020092) #28 PELI1 (ENSPCIG00000022340) #29 VPS54 (ENSPCIG00000022325) #30 UGP2 (ENSPCIG00000022314) #31 MDH1 (ENSPCIG00000024579) #34 WDPCP (ENSPCIG00000024581) #35 ENSPCIG00000037374 OTX1 (ENSPCIG00000024582) #36 EHBP1 (ENSPCIG00000005257) #37 TMEM17 (ENSPCIG00000024919) Platypus MODERN SPECIES 20 TRMT6 (ENSOANG00000008403) ENSOANG00000050119 GPCPD1 (ENSOANG00000008396) ENSOANG00000008395 #8 ENSOANG00000008393 #10 FBXO48 (ENSOANG00000008392) #11 PLEK (ENSOANG00000050161) #12 CNRIP1 (ENSOANG00000037625) #13 ENSOANG00000008386 PNO1 (ENSOANG00000045797) #14 DNAAF10 (ENSOANG00000008385) #15 ENSOANG00000012442 #17 MEIS1 (ENSOANG00000012441) #18 SPRED2 (ENSOANG00000046721) #19 ACTR2 (ENSOANG00000039143) #21 RAB1A (ENSOANG00000012438) #22 ENSOANG00000045432 #23 SLC1A4 (ENSOANG00000012436) #24 SERTAD2 (ENSOANG00000012435) #25 AFTPH (ENSOANG00000012433) #27 ENSOANG00000036481 #26 LGALSL (ENSOANG00000012432) #28 PELI1 (ENSOANG00000012431) #29 VPS54 (ENSOANG00000012428) #30 UGP2 (ENSOANG00000012427) #31 MDH1 (ENSOANG00000012426) #34 WDPCP (ENSOANG00000012425) #35 OTX1 (ENSOANG00000044489) #36 EHBP1 (ENSOANG00000012423) #37 TMEM17 (ENSOANG00000012422) B3GNT2 (ENSOANG00000012421) Sauria ANCESTRAL SPECIES 1 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Lepidosauria ANCESTRAL SPECIES 69 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.h #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 tuatara DUPLICATION tuatara MODERN SPECIES 78 SPRED2 (ENSSPUG00000012741) #19 ACTR2 (ENSSPUG00000012816) #21 RAB1A (ENSSPUG00000012822) #22 ENSSPUG00000012834 #23 SLC1A4 (ENSSPUG00000012843) #24 AFTPH (ENSSPUG00000012864) #27 ENSSPUG00000012880 #26 LGALSL (ENSSPUG00000012885) #28 PELI1 (ENSSPUG00000012897) #29 VPS54 (ENSSPUG00000012900) #30 UGP2 (ENSSPUG00000012916) #31 MDH1 (ENSSPUG00000012931) #34 WDPCP (ENSSPUG00000012958) #35 OTX1 (ENSSPUG00000012988) #36 EHBP1 (ENSSPUG00000013010) #37 TMEM17 (ENSSPUG00000013034) B3GNT2 (ENSSPUG00000013043) COMMD1 (ENSSPUG00000013049) tuatara MODERN SPECIES 624 LRFN3 (ENSSPUG00000011328) LRFN1 (ENSSPUG00000011338) GMFG (ENSSPUG00000011355) SAMD4B (ENSSPUG00000011365) ENSSPUG00000011375 PAF1 (ENSSPUG00000011383) ENSSPUG00000011392 ZFP36 (ENSSPUG00000011402) ENSSPUG00000011406 ENSSPUG00000011411 ENSSPUG00000011422 SUPT5H (ENSSPUG00000011434) TIMM50 (ENSSPUG00000011466) ENSSPUG00000011514 ENSSPUG00000011705 ENSSPUG00000011756 #22 ENSSPUG00000011766 ENSSPUG00000011778 ENSSPUG00000011791 ENSSPUG00000011821 ENSSPUG00000011841 ENSSPUG00000011860 ALKBH6 (ENSSPUG00000011895) CLIP3 (ENSSPUG00000011956) ENSSPUG00000012088 THAP8 (ENSSPUG00000012093) WDR62 (ENSSPUG00000012214) ENSSPUG00000012645 POLR2I (ENSSPUG00000012658) ENSSPUG00000012673 TBCB (ENSSPUG00000012681) Episquamata ANCESTRAL SPECIES ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.h #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Toxicofera ANCESTRAL SPECIES ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.h #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT01100000263484.C.a.l ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Lizard DUPLICATION Lizard MODERN SPECIES BFSP1 (ENSACAG00000027235) ENSACAG00000000824 #8 APLF (ENSACAG00000000856) #10 FBXO48 (ENSACAG00000000867) #11 PLEK (ENSACAG00000000871) #12 CNRIP1 (ENSACAG00000000999) #13 ENSACAG00000040514 PNO1 (ENSACAG00000001218) #14 DNAAF10 (ENSACAG00000001044) #15 C1D (ENSACAG00000001337) #16 ENSACAG00000038561 MEIS1 (ENSACAG00000002083) #18 SPRED2 (ENSACAG00000002009) #19 ACTR2 (ENSACAG00000001918) #21 ENSACAG00000001866 RAB1A (ENSACAG00000042522) #22 ENSACAG00000001863 #23 SLC1A4 (ENSACAG00000001717) #24 SERTAD2 (ENSACAG00000001714) #25 AFTPH (ENSACAG00000001654) #27 ENSACAG00000001649 LGALSL (ENSACAG00000001605) #28 COL6A3 (ENSACAG00000004231) ENSACAG00000040968 MLPH (ENSACAG00000004551) PRLH (ENSACAG00000020999) RAB17 (ENSACAG00000004554) ENSACAG00000004607 ENSACAG00000043473 ENSACAG00000036057 ENSACAG00000004735 Lizard MODERN SPECIES 1241 ENSACAG00000038580 ENSACAG00000000375 ENSACAG00000000693 ENSACAG00000000787 ENSACAG00000028583 ENSACAG00000000875 #22 ENSACAG00000034827 ENSACAG00000036374 ENSACAG00000027559 Elapidae ANCESTRAL SPECIES ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.h #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT01100000263484.C.a.l ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Indian cobra MODERN SPECIES PCSK2 (ENSNNAG00000012540) BFSP1 (ENSNNAG00000012581) ENSNNAG00000012694 #8 ENSNNAG00000012745 #10 FBXO48 (ENSNNAG00000012774) #11 PLEK (ENSNNAG00000012798) #12 CNRIP1 (ENSNNAG00000012863) #13 ENSNNAG00000012878 PPP3R1 (ENSNNAG00000012886) PNO1 (ENSNNAG00000012918) #14 DNAAF10 (ENSNNAG00000012936) #15 C1D (ENSNNAG00000012988) #16 MEIS1 (ENSNNAG00000013019) #18 SPRED2 (ENSNNAG00000013140) #19 ACTR2 (ENSNNAG00000013219) #21 RAB1A (ENSNNAG00000013227) #22 ENSNNAG00000013240 #23 SLC1A4 (ENSNNAG00000013270) #24 SERTAD2 (ENSNNAG00000013335) #25 ENSNNAG00000013342 #27 ENSNNAG00000013378 #26 MLNR (ENSNNAG00000013400) LGALSL (ENSNNAG00000013404) #28 ENSNNAG00000013415 PELI1 (ENSNNAG00000013434) #29 VPS54 (ENSNNAG00000013453) #30 UGP2 (ENSNNAG00000013510) #31 MDH1 (ENSNNAG00000013583) #34 WDPCP (ENSNNAG00000013610) #35 OTX1 (ENSNNAG00000013651) #36 EHBP1 (ENSNNAG00000013729) #37 Elapidae_a ANCESTRAL SPECIES 6 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.h #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT01100000263484.C.a.l ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 4591 RAB1A (ENSLLTG00000015992) #22 ENSLLTG00000015994 #23 SLC1A4 (ENSLLTG00000015997) #24 Blue-lipped sea krait MODERN SPECIES 4687 SUPT5H (ENSLLTG00000009279) TIMM50 (ENSLLTG00000009251) ENSLLTG00000009237 CHP2 (ENSLLTG00000009220) ENSLLTG00000009202 #22 ENSLLTG00000009165 ENSLLTG00000009136 CAPNS1 (ENSLLTG00000009114) ENSLLTG00000009060 Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A.h #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT01100000263484.C.a.l ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Mainland tiger snake MODERN SPECIES 23 SNRPB2 (ENSNSUG00000019187) PCSK2 (ENSNSUG00000019186) BFSP1 (ENSNSUG00000019185) ENSNSUG00000019184 #8 ENSNSUG00000019182 FBXO48 (ENSNSUG00000019181) #11 PLEK (ENSNSUG00000019180) #12 CNRIP1 (ENSNSUG00000019179) #13 PPP3R1 (ENSNSUG00000019177) PNO1 (ENSNSUG00000019176) #14 DNAAF10 (ENSNSUG00000019175) #15 C1D (ENSNSUG00000019174) #16 MEIS1 (ENSNSUG00000019167) #18 SPRED2 (ENSNSUG00000019166) #19 ACTR2 (ENSNSUG00000019165) #21 RAB1A (ENSNSUG00000019164) #22 ENSNSUG00000019162 #23 SLC1A4 (ENSNSUG00000019138) #24 ENSNSUG00000019136 SERTAD2 (ENSNSUG00000019135) #25 ENSNSUG00000019134 #26 AFTPH (ENSNSUG00000019132) #27 MLNR (ENSNSUG00000019125) LGALSL (ENSNSUG00000019124) #28 PELI1 (ENSNSUG00000019123) #29 VPS54 (ENSNSUG00000019122) #30 UGP2 (ENSNSUG00000019121) #31 MDH1 (ENSNSUG00000019120) #34 WDPCP (ENSNSUG00000019119) #35 OTX1 (ENSNSUG00000019118) #36 EHBP1 (ENSNSUG00000019094) #37 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 56 SNRPB2 (ENSPTXG00000005873) PCSK2 (ENSPTXG00000005804) BFSP1 (ENSPTXG00000005802) ENSPTXG00000005800 #8 ENSPTXG00000005799 #10 FBXO48 (ENSPTXG00000005797) #11 PLEK (ENSPTXG00000005794) #12 CNRIP1 (ENSPTXG00000005792) #13 PPP3R1 (ENSPTXG00000005790) PNO1 (ENSPTXG00000005788) #14 DNAAF10 (ENSPTXG00000005787) #15 C1D (ENSPTXG00000005785) #16 MEIS1 (ENSPTXG00000005783) #18 SPRED2 (ENSPTXG00000005781) #19 ACTR2 (ENSPTXG00000005779) #21 RAB1A (ENSPTXG00000005777) #22 ENSPTXG00000005775 #23 SLC1A4 (ENSPTXG00000005773) #24 SERTAD2 (ENSPTXG00000005772) #25 ENSPTXG00000005770 #26 AFTPH (ENSPTXG00000006529) #27 MLNR (ENSPTXG00000006528) LGALSL (ENSPTXG00000006527) #28 PELI1 (ENSPTXG00000006526) #29 VPS54 (ENSPTXG00000006525) #30 UGP2 (ENSPTXG00000006524) #31 MDH1 (ENSPTXG00000006523) #34 ENSPTXG00000006522 #35 OTX1 (ENSPTXG00000006521) #36 EHBP1 (ENSPTXG00000006520) #37 TMEM17 (ENSPTXG00000006519) Eastern brown snake MODERN SPECIES 77 ENSPTXG00000016634 CHP2 (ENSPTXG00000016638) ENSPTXG00000016642 #22 CAPNS1 (ENSPTXG00000016644) ALKBH6 (ENSPTXG00000016647) CLIP3 (ENSPTXG00000016650) ENSPTXG00000016653 ENSPTXG00000016654 ENSPTXG00000016657 ENSPTXG00000016660 TBCB (ENSPTXG00000016663) ENSPTXG00000016667 ENSPTXG00000016669 TMEM160 (ENSPTXG00000016674) ARHGAP35 (ENSPTXG00000016676) AP2S1 (ENSPTXG00000016680) SLC1A5 (ENSPTXG00000016684) FKRP (ENSPTXG00000016691) Laterata ANCESTRAL SPECIES 17 ENSGT00940000160922 ENSGT00390000008920.c.b ENSGT00940000159702 ENSGT00940000164285.b ENSGT00390000001474 ENSGT00940000164885 ENSGT00940000162360 ENSGT00390000010899.a.b.a.a.b ENSGT00390000010899.a.b.a.a.a ENSGT00940000165970 ENSGT00730000111686 ENSGT00440000037640 ENSGT01040000240503.C ENSGT00940000164418 ENSGT00940000161957 ENSGT00940000154958 #22 ENSGT00640000091563.b ENSGT00940000175315 ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478 ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000165739 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 Argentine black and white tegu MODERN SPECIES 54 FBXO48 (ENSSMRG00000005221) #11 PLEK (ENSSMRG00000005222) #12 CNRIP1 (ENSSMRG00000005226) #13 PPP3R1 (ENSSMRG00000005229) PNO1 (ENSSMRG00000005236) #14 DNAAF10 (ENSSMRG00000005245) #15 C1D (ENSSMRG00000005249) #16 MEIS1 (ENSSMRG00000005267) #18 ENSSMRG00000005283 ENSSMRG00000005289 SPRED2 (ENSSMRG00000005297) #19 ENSSMRG00000005300 ENSSMRG00000005304 ACTR2 (ENSSMRG00000005307) #21 ENSSMRG00000005312 RAB1A (ENSSMRG00000005319) #22 ENSSMRG00000005322 #23 SLC1A4 (ENSSMRG00000005324) #24 SERTAD2 (ENSSMRG00000005372) #25 AFTPH (ENSSMRG00000005377) #27 ENSSMRG00000005383 #26 LGALSL (ENSSMRG00000005386) #28 PELI1 (ENSSMRG00000005414) #29 VPS54 (ENSSMRG00000005426) #30 UGP2 (ENSSMRG00000005430) #31 MDH1 (ENSSMRG00000005439) #34 WDPCP (ENSSMRG00000005490) #35 OTX1 (ENSSMRG00000005510) #36 EHBP1 (ENSSMRG00000005524) #37 TMEM17 (ENSSMRG00000005554) ENSSMRG00000005599 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 11 APLF (ENSPMRG00000002973) #10 FBXO48 (ENSPMRG00000002967) #11 PLEK (ENSPMRG00000002960) #12 CNRIP1 (ENSPMRG00000002954) #13 PPP3R1 (ENSPMRG00000002950) ENSPMRG00000002943 #14 DNAAF10 (ENSPMRG00000002932) #15 C1D (ENSPMRG00000002925) #16 ENSPMRG00000002914 ENSPMRG00000002903 MEIS1 (ENSPMRG00000002862) #18 ENSPMRG00000002838 SPRED2 (ENSPMRG00000002817) #19 ACTR2 (ENSPMRG00000002797) #21 ENSPMRG00000002778 RAB1A (ENSPMRG00000002764) #22 CEP68 (ENSPMRG00000002741) #23 SLC1A4 (ENSPMRG00000002725) #24 ENSPMRG00000002716 ENSPMRG00000002707 ENSPMRG00000002706 SERTAD2 (ENSPMRG00000002700) #25 ENSPMRG00000002692 AFTPH (ENSPMRG00000002667) #27 MLNR (ENSPMRG00000002658) MMUT (ENSPMRG00000002599) GLYATL3 (ENSPMRG00000002579) ENSPMRG00000002563 ENSPMRG00000002539 ENSPMRG00000002532 ENSPMRG00000002513 Common wall lizard MODERN SPECIES 16 SAMD4B (ENSPMRG00000014348) ENSPMRG00000014338 ENSPMRG00000014332 PAF1 (ENSPMRG00000014326) ENSPMRG00000014320 ZFP36 (ENSPMRG00000014317) ENSPMRG00000014311 ENSPMRG00000014303 ENSPMRG00000014296 ENSPMRG00000014287 ENSPMRG00000014279 ENSPMRG00000014243 SUPT5H (ENSPMRG00000014149) ENSPMRG00000014118 CHP2 (ENSPMRG00000014110) ENSPMRG00000014102 #22 ENSPMRG00000014099 ENSPMRG00000014080 CAPNS1 (ENSPMRG00000014066) ENSPMRG00000014061 ENSPMRG00000014036 ALKBH6 (ENSPMRG00000014022) CLIP3 (ENSPMRG00000014005) ENSPMRG00000013991 WDR62 (ENSPMRG00000013517) ENSPMRG00000013446 POLR2I (ENSPMRG00000013442) ENSPMRG00000013438 TBCB (ENSPMRG00000013432) ENSPMRG00000013430 ENSPMRG00000013428 Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Archosauria ANCESTRAL SPECIES 29 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Aves ANCESTRAL SPECIES 35 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Neognathae ANCESTRAL SPECIES 32 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT01040000241398.a ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Neognathae_b ANCESTRAL SPECIES 32 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Neognathae_c ANCESTRAL SPECIES 35 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Golden eagle MODERN SPECIES 24 PCSK2 (ENSACCG00020006307) BFSP1 (ENSACCG00020006284) ENSACCG00020006272 #8 APLF (ENSACCG00020006257) #10 FBXO48 (ENSACCG00020006254) #11 PLEK (ENSACCG00020006245) #12 CNRIP1 (ENSACCG00020006234) #13 PPP3R1 (ENSACCG00020006223) PNO1 (ENSACCG00020006212) #14 DNAAF10 (ENSACCG00020006200) #15 C1D (ENSACCG00020006189) #16 ENSACCG00020006175 #17 MEIS1 (ENSACCG00020006130) #18 SPRED2 (ENSACCG00020006109) #19 ACTR2 (ENSACCG00020006080) #21 RAB1A (ENSACCG00020006051) #22 CEP68 (ENSACCG00020006029) #23 SLC1A4 (ENSACCG00020006005) #24 SERTAD2 (ENSACCG00020005994) #25 ENSACCG00020005980 #26 AFTPH (ENSACCG00020005956) #27 LGALSL (ENSACCG00020005930) #28 PELI1 (ENSACCG00020005906) #29 VPS54 (ENSACCG00020005801) #30 UGP2 (ENSACCG00020005728) #31 MDH1 (ENSACCG00020005699) #34 WDPCP (ENSACCG00020005678) #35 OTX1 (ENSACCG00020005656) #36 EHBP1 (ENSACCG00020005580) #37 TMEM17 (ENSACCG00020005527) B3GNT2 (ENSACCG00020005515) Kakapo MODERN SPECIES 23 ENSSHBG00005015289 #8 ENSSHBG00005015282 APLF (ENSSHBG00005015272) #10 FBXO48 (ENSSHBG00005015269) #11 PLEK (ENSSHBG00005015261) #12 CNRIP1 (ENSSHBG00005015258) #13 PPP3R1 (ENSSHBG00005015250) PNO1 (ENSSHBG00005015242) #14 DNAAF10 (ENSSHBG00005015235) #15 C1D (ENSSHBG00005015222) #16 ENSSHBG00005015207 #17 MEIS1 (ENSSHBG00005015189) #18 ENSSHBG00005015181 SPRED2 (ENSSHBG00005015173) #19 ACTR2 (ENSSHBG00005015166) #21 RAB1A (ENSSHBG00005015159) #22 CEP68 (ENSSHBG00005015142) #23 SLC1A4 (ENSSHBG00005015130) #24 SERTAD2 (ENSSHBG00005015121) #25 ENSSHBG00005015104 #26 AFTPH (ENSSHBG00005015097) #27 LGALSL (ENSSHBG00005015090) #28 PELI1 (ENSSHBG00005015086) #29 ENSSHBG00005015079 VPS54 (ENSSHBG00005015051) #30 UGP2 (ENSSHBG00005015028) #31 MDH1 (ENSSHBG00005015017) #34 WDPCP (ENSSHBG00005015001) #35 OTX1 (ENSSHBG00005014991) #36 EHBP1 (ENSSHBG00005014965) #37 TMEM17 (ENSSHBG00005014948) Passeriformes ANCESTRAL SPECIES 31 ENSGT00390000016976 ENSGT00390000018199.b.c.b ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Great tit MODERN SPECIES 22 BFSP1 (ENSPMJG00000001637) ENSPMJG00000001644 APLF (ENSPMJG00000001658) #10 ENSPMJG00000001662 #8 FBXO48 (ENSPMJG00000001663) #11 PLEK (ENSPMJG00000001665) #12 CNRIP1 (ENSPMJG00000001670) #13 PPP3R1 (ENSPMJG00000001689) PNO1 (ENSPMJG00000001695) #14 DNAAF10 (ENSPMJG00000001703) #15 C1D (ENSPMJG00000001708) #16 ENSPMJG00000001774 #17 MEIS1 (ENSPMJG00000001854) #18 SPRED2 (ENSPMJG00000002067) #19 ACTR2 (ENSPMJG00000002085) #21 RAB1A (ENSPMJG00000002113) #22 CEP68 (ENSPMJG00000002124) #23 SLC1A4 (ENSPMJG00000002145) #24 SERTAD2 (ENSPMJG00000002211) #25 AFTPH (ENSPMJG00000002220) #27 ENSPMJG00000002259 #26 LGALSL (ENSPMJG00000002274) #28 PELI1 (ENSPMJG00000002305) #29 VPS54 (ENSPMJG00000002369) #30 UGP2 (ENSPMJG00000002442) #31 MDH1 (ENSPMJG00000002452) #34 WDPCP (ENSPMJG00000002462) #35 OTX1 (ENSPMJG00000002556) #36 EHBP1 (ENSPMJG00000002565) #37 TMEM17 (ENSPMJG00000002814) B3GNT2 (ENSPMJG00000002825) Passeriformes_d ANCESTRAL SPECIES 32 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Flycatcher MODERN SPECIES 21 ENSFALG00000013658 PROKR1 (ENSFALG00000027536) #8 APLF (ENSFALG00000013652) #10 ENSFALG00000028459 #11 PLEK (ENSFALG00000013650) #12 CNRIP1 (ENSFALG00000027124) #13 PPP3R1 (ENSFALG00000013648) WDR92 (ENSFALG00000028071) #15 PNO1 (ENSFALG00000029069) #14 C1D (ENSFALG00000024869) #16 ENSFALG00000013638 #17 MEIS1 (ENSFALG00000013636) #18 SPRED2 (ENSFALG00000028802) #19 ACTR2 (ENSFALG00000026727) #21 ENSFALG00000027263 RAB1A (ENSFALG00000023532) #22 CEP68 (ENSFALG00000013621) #23 SLC1A4 (ENSFALG00000013619) #24 SERTAD2 (ENSFALG00000014149) #25 ENSFALG00000028308 #26 AFTPH (ENSFALG00000013616) #27 LGALSL (ENSFALG00000013611) #28 PELI1 (ENSFALG00000013605) #29 VPS54 (ENSFALG00000013599) #30 UGP2 (ENSFALG00000013598) #31 MDH1 (ENSFALG00000013597) #34 WDPCP (ENSFALG00000013596) #35 OTX1 (ENSFALG00000013593) #36 EHBP1 (ENSFALG00000013591) #37 TMEM17 (ENSFALG00000013589) ENSFALG00000014145 Passeriformes_g ANCESTRAL SPECIES 42 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Medium ground finch MODERN SPECIES 99 BFSP1 (ENSGFOG00000007688) ENSGFOG00000007642 ENSGFOG00000007636 #8 APLF (ENSGFOG00000007622) #10 FBXO48 (ENSGFOG00000007610) #11 PLEK (ENSGFOG00000007591) #12 CNRIP1 (ENSGFOG00000007585) #13 PPP3R1 (ENSGFOG00000007577) PNO1 (ENSGFOG00000007572) #14 DNAAF10 (ENSGFOG00000007564) #15 C1D (ENSGFOG00000007555) #16 ENSGFOG00000007544 #17 MEIS1 (ENSGFOG00000007474) #18 SPRED2 (ENSGFOG00000007456) #19 ACTR2 (ENSGFOG00000007444) #21 RAB1A (ENSGFOG00000007437) #22 CEP68 (ENSGFOG00000007430) #23 SLC1A4 (ENSGFOG00000007417) #24 SERTAD2 (ENSGFOG00000007413) #25 ENSGFOG00000007408 #26 AFTPH (ENSGFOG00000007395) #27 LGALSL (ENSGFOG00000007383) #28 PELI1 (ENSGFOG00000007371) #29 VPS54 (ENSGFOG00000011155) #30 UGP2 (ENSGFOG00000011150) #31 MDH1 (ENSGFOG00000011139) #34 WDPCP (ENSGFOG00000011130) #35 OTX1 (ENSGFOG00000011126) #36 EHBP1 (ENSGFOG00000011082) #37 TMEM17 (ENSGFOG00000011060) Passeroidea ANCESTRAL SPECIES 41 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Zebra finch MODERN SPECIES 23 BFSP1 (ENSTGUG00000002401) ENSTGUG00000002397 ENSTGUG00000028491 #8 APLF (ENSTGUG00000028592) #10 FBXO48 (ENSTGUG00000026746) #11 PLEK (ENSTGUG00000002380) #12 CNRIP1 (ENSTGUG00000021224) #13 PPP3R1 (ENSTGUG00000018231) PNO1 (ENSTGUG00000002369) #14 DNAAF10 (ENSTGUG00000018213) #15 C1D (ENSTGUG00000029046) #16 ENSTGUG00000002363 #17 MEIS1 (ENSTGUG00000002353) #18 SPRED2 (ENSTGUG00000025635) #19 ACTR2 (ENSTGUG00000002335) #21 RAB1A (ENSTGUG00000002328) #22 CEP68 (ENSTGUG00000029210) #23 SLC1A4 (ENSTGUG00000002315) #24 SERTAD2 (ENSTGUG00000024469) #25 AFTPH (ENSTGUG00000002302) #27 ENSTGUG00000025533 #26 LGALSL (ENSTGUG00000025180) #28 PELI1 (ENSTGUG00000002289) #29 VPS54 (ENSTGUG00000002268) #30 UGP2 (ENSTGUG00000002252) #31 MDH1 (ENSTGUG00000002244) #34 WDPCP (ENSTGUG00000002232) #35 OTX1 (ENSTGUG00000019683) #36 EHBP1 (ENSTGUG00000002228) #37 TMEM17 (ENSTGUG00000002226) B3GNT2 (ENSTGUG00000002218) Common canary MODERN SPECIES 38 FBXO48 (ENSSCAG00000001107) #11 PLEK (ENSSCAG00000001096) #12 CNRIP1 (ENSSCAG00000001087) #13 PPP3R1 (ENSSCAG00000001078) PNO1 (ENSSCAG00000001058) #14 DNAAF10 (ENSSCAG00000001039) #15 C1D (ENSSCAG00000001030) #16 ENSSCAG00000001019 #17 ENSSCAG00000001007 #17 MEIS1 (ENSSCAG00000000987) #18 SPRED2 (ENSSCAG00000000973) #19 ACTR2 (ENSSCAG00000000959) #21 RAB1A (ENSSCAG00000000941) #22 CEP68 (ENSSCAG00000000934) #23 SLC1A4 (ENSSCAG00000000927) #24 SERTAD2 (ENSSCAG00000000919) #25 ENSSCAG00000000909 #26 AFTPH (ENSSCAG00000000895) #27 LGALSL (ENSSCAG00000000875) #28 PELI1 (ENSSCAG00000000846) #29 VPS54 (ENSSCAG00000000820) #30 UGP2 (ENSSCAG00000000799) #31 MDH1 (ENSSCAG00000000782) #34 WDPCP (ENSSCAG00000000727) #35 OTX1 (ENSSCAG00000000714) #36 EHBP1 (ENSSCAG00000000669) #37 TMEM17 (ENSSCAG00000000656) CRLS1 (ENSSCAG00000000633) Galloanserae ANCESTRAL SPECIES 29 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT01040000241398.a ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Anatidae ANCESTRAL SPECIES 60 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Duck MODERN SPECIES 21 CFAP61 (ENSAPLG00000013456) CRNKL1 (ENSAPLG00000013105) ENSAPLG00000024100 RIN2 (ENSAPLG00000014865) APLF (ENSAPLG00000009117) #10 PLEK (ENSAPLG00000009140) #12 CNRIP1 (ENSAPLG00000022779) #13 PPP3R1 (ENSAPLG00000023228) PNO1 (ENSAPLG00000029102) #14 DNAAF10 (ENSAPLG00000029023) #15 C1D (ENSAPLG00000009320) #16 ENSAPLG00000025999 #17 MEIS1 (ENSAPLG00000009141) #18 SPRED2 (ENSAPLG00000009387) #19 ACTR2 (ENSAPLG00000009440) #21 RAB1A (ENSAPLG00000018342) #22 CEP68 (ENSAPLG00000016942) #23 SLC1A4 (ENSAPLG00000009621) #24 SERTAD2 (ENSAPLG00000000672) #25 AFTPH (ENSAPLG00000009640) #27 ENSAPLG00000017313 #26 LGALSL (ENSAPLG00000022507) #28 PELI1 (ENSAPLG00000009701) #29 VPS54 (ENSAPLG00000009734) #30 UGP2 (ENSAPLG00000009870) #31 MDH1 (ENSAPLG00000009983) #34 WDPCP (ENSAPLG00000010025) #35 OTX1 (ENSAPLG00000024184) #36 EHBP1 (ENSAPLG00000006773) #37 TMEM17 (ENSAPLG00000006949) B3GNT2 (ENSAPLG00000001464) Pink-footed goose MODERN SPECIES 155 APLF (ENSABRG00000002483) #10 FBXO48 (ENSABRG00000002508) #11 PLEK (ENSABRG00000002514) #12 CNRIP1 (ENSABRG00000002531) #13 PPP3R1 (ENSABRG00000002543) PNO1 (ENSABRG00000002566) #14 DNAAF10 (ENSABRG00000002587) #15 C1D (ENSABRG00000002604) #16 ENSABRG00000002625 #17 ENSABRG00000002632 ENSABRG00000002656 MEIS1 (ENSABRG00000002723) #18 SPRED2 (ENSABRG00000002801) #19 ACTR2 (ENSABRG00000002811) #21 RAB1A (ENSABRG00000002833) #22 CEP68 (ENSABRG00000002866) #23 SLC1A4 (ENSABRG00000002879) #24 SERTAD2 (ENSABRG00000002908) #25 AFTPH (ENSABRG00000002918) #27 LGALSL (ENSABRG00000002936) #28 PELI1 (ENSABRG00000002957) #29 Phasianidae ANCESTRAL SPECIES 29 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT01040000241398.a ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00390000001858 #26 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Phasianidae_b ANCESTRAL SPECIES 28 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT01040000241398.a ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Turkey MODERN SPECIES 11 BFSP1 (ENSMGAG00000004415) ENSMGAG00000004402 #8 ENSMGAG00000018645 ENSMGAG00000004419 #10 FBXO48 (ENSMGAG00000004427) #11 PLEK (ENSMGAG00000004436) #12 CNRIP1 (ENSMGAG00000004456) #13 PPP3R1 (ENSMGAG00000004474) PNO1 (ENSMGAG00000004514) #14 DNAAF10 (ENSMGAG00000004517) #15 ENSMGAG00000004531 #17 MEIS1 (ENSMGAG00000021593) #18 SPRED2 (ENSMGAG00000004563) #19 ACTR2 (ENSMGAG00000004587) #21 ENSMGAG00000019067 RAB1A (ENSMGAG00000004611) #22 CEP68 (ENSMGAG00000004667) #23 SLC1A4 (ENSMGAG00000004682) #24 SERTAD2 (ENSMGAG00000015908) #25 AFTPH (ENSMGAG00000004693) #27 ENSMGAG00000019014 #26 LGALSL (ENSMGAG00000004734) #28 PELI1 (ENSMGAG00000019753) #29 VPS54 (ENSMGAG00000004768) #30 UGP2 (ENSMGAG00000004824) #31 MDH1 (ENSMGAG00000004885) #34 WDPCP (ENSMGAG00000004854) #35 EHBP1 (ENSMGAG00000004927) #37 TMEM17 (ENSMGAG00000004966) B3GNT2 (ENSMGAG00000015914) COMMD1 (ENSMGAG00000005060) Chicken MODERN SPECIES 22 APLF (ENSGALG00010017867) #10 FBXO48 (ENSGALG00010017849) #11 PLEK (ENSGALG00010017831) #12 CNRIP1 (ENSGALG00010017787) #13 PPP3R1 (ENSGALG00010017778) PNO1 (ENSGALG00010017771) #14 DNAAF10 (ENSGALG00010017766) #15 C1D (ENSGALG00010017755) #16 ETAA1 (ENSGALG00010017744) #17 ENSGALG00010017728 ENSGALG00010017722 MEIS1 (ENSGALG00010017708) #18 SPRED2 (ENSGALG00010017672) #19 ACTR2 (ENSGALG00010016276) #21 ENSGALG00010017627 RAB1B (ENSGALG00010017622) #22 CEP68 (ENSGALG00010017594) #23 SLC1A4 (ENSGALG00010019257) #24 SERTAD2 (ENSGALG00010019243) #25 ENSGALG00010017151 #26 AFTPH (ENSGALG00010017141) #27 LGALSL (ENSGALG00010017115) #28 PELI3 (ENSGALG00010018958) #29 VPS54 (ENSGALG00010018923) #30 UGP2 (ENSGALG00010018904) #31 MDH1 (ENSGALG00010016624) #34 WDPCP (ENSGALG00010016605) #35 OTX1 (ENSGALG00010016593) #36 EHBP1 (ENSGALG00010016584) #37 TMEM17 (ENSGALG00010018880) B3GNT2 (ENSGALG00010017838) Japanese quail MODERN SPECIES 21 PCSK2 (ENSCJPG00005011465) BFSP1 (ENSCJPG00005011467) ENSCJPG00005011482 #8 ENSCJPG00005011483 ENSCJPG00005011484 #10 PLEK (ENSCJPG00005011490) #12 CNRIP1 (ENSCJPG00005011494) #13 PPP3R1 (ENSCJPG00005011495) PNO1 (ENSCJPG00005011496) #14 DNAAF10 (ENSCJPG00005011497) #15 C1D (ENSCJPG00005011500) #16 ENSCJPG00005011513 #17 MEIS1 (ENSCJPG00005011532) #18 SPRED2 (ENSCJPG00005011544) #19 ACTR2 (ENSCJPG00005011545) #21 RAB1A (ENSCJPG00005011546) #22 CEP68 (ENSCJPG00005011547) #23 SLC1A4 (ENSCJPG00005011555) #24 SERTAD2 (ENSCJPG00005011560) #25 AFTPH (ENSCJPG00005011562) #27 ENSCJPG00005011566 #26 ENSCJPG00005011568 #28 ENSCJPG00005011569 #28 PELI1 (ENSCJPG00005011590) #29 VPS54 (ENSCJPG00005011596) #30 UGP2 (ENSCJPG00005011774) #31 MDH1 (ENSCJPG00005011775) #34 WDPCP (ENSCJPG00005011776) #35 OTX1 (ENSCJPG00005011794) #36 EHBP1 (ENSCJPG00005011795) #37 TMEM17 (ENSCJPG00005011798) African ostrich MODERN SPECIES 1035 ENSSCUG00000016844 APLF (ENSSCUG00000016843) #10 FBXO48 (ENSSCUG00000016842) #11 PLEK (ENSSCUG00000016840) #12 CNRIP1 (ENSSCUG00000016838) #13 PPP3R1 (ENSSCUG00000016836) PNO1 (ENSSCUG00000016819) #14 DNAAF10 (ENSSCUG00000016805) #15 C1D (ENSSCUG00000016803) #16 ENSSCUG00000016796 #17 ENSSCUG00000016785 #18 SPRED2 (ENSSCUG00000016776) #19 ACTR2 (ENSSCUG00000016771) #21 RAB1A (ENSSCUG00000016768) #22 ENSSCUG00000016764 #23 SLC1A4 (ENSSCUG00000016756) #24 SERTAD2 (ENSSCUG00000016748) #25 ENSSCUG00000016745 #26 AFTPH (ENSSCUG00000016739) #27 LGALSL (ENSSCUG00000016734) #28 PELI1 (ENSSCUG00000016725) #29 VPS54 (ENSSCUG00000016720) #30 UGP2 (ENSSCUG00000016718) #31 MDH1 (ENSSCUG00000016711) #34 WDPCP (ENSSCUG00000016705) #35 EHBP1 (ENSSCUG00000016694) #37 TMEM17 (ENSSCUG00000016683) B3GNT2 (ENSSCUG00000016675) COMMD1 (ENSSCUG00000016672) Australian saltwater crocodile MODERN SPECIES 60 ENSCPRG00005012710 #8 APLF (ENSCPRG00005012739) #10 FBXO48 (ENSCPRG00005012746) #11 PLEK (ENSCPRG00005012755) #12 CNRIP1 (ENSCPRG00005012769) #13 PPP3R1 (ENSCPRG00005012773) PNO1 (ENSCPRG00005012776) #14 DNAAF10 (ENSCPRG00005012802) #15 C1D (ENSCPRG00005012813) #16 ENSCPRG00005012839 #17 MEIS1 (ENSCPRG00005012878) #18 ENSCPRG00005012911 SPRED2 (ENSCPRG00005012941) #19 ACTR2 (ENSCPRG00005012952) #21 ENSCPRG00005012975 RAB1A (ENSCPRG00005012987) #22 CEP68 (ENSCPRG00005012992) #23 SLC1A4 (ENSCPRG00005013000) #24 SERTAD2 (ENSCPRG00005013016) #25 AFTPH (ENSCPRG00005013021) #27 ENSCPRG00005013030 #26 LGALSL (ENSCPRG00005013037) #28 ENSCPRG00005013039 PELI1 (ENSCPRG00005013051) #29 VPS54 (ENSCPRG00005013060) #30 UGP2 (ENSCPRG00005013070) #31 MDH1 (ENSCPRG00005013087) #34 WDPCP (ENSCPRG00005013098) #35 ENSCPRG00005013108 EHBP1 (ENSCPRG00005013126) #37 TMEM17 (ENSCPRG00005013145) Cryptodira ANCESTRAL SPECIES 49 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 375 APLF (ENSPSIG00000011567) #10 FBXO48 (ENSPSIG00000011431) #11 PLEK (ENSPSIG00000010697) #12 CNRIP1 (ENSPSIG00000010556) #13 PPP3R1 (ENSPSIG00000010550) PNO1 (ENSPSIG00000010533) #14 DNAAF10 (ENSPSIG00000010344) #15 C1D (ENSPSIG00000010015) #16 ENSPSIG00000001231 ENSPSIG00000009822 #17 ENSPSIG00000001224 MEIS1 (ENSPSIG00000009187) #18 SPRED2 (ENSPSIG00000008800) #19 ACTR2 (ENSPSIG00000008124) #21 RAB1A (ENSPSIG00000008028) #22 CEP68 (ENSPSIG00000007957) #23 SLC1A4 (ENSPSIG00000017947) #24 SERTAD2 (ENSPSIG00000017893) #25 AFTPH (ENSPSIG00000017890) #27 LGALSL (ENSPSIG00000017748) #28 ENSPSIG00000017632 PELI1 (ENSPSIG00000017442) #29 VPS54 (ENSPSIG00000016091) #30 UGP2 (ENSPSIG00000015139) #31 MDH1 (ENSPSIG00000014797) #34 WDPCP (ENSPSIG00000013662) #35 EHBP1 (ENSPSIG00000013180) #37 TMEM17 (ENSPSIG00000013175) B3GNT2 (ENSPSIG00000001211) COMMD1 (ENSPSIG00000013161) Chinese turtle MODERN SPECIES 1717 PAF1 (ENSPSIG00000006297) ENSPSIG00000006004 ENSPSIG00000000841 SUPT5H (ENSPSIG00000014117) TIMM50 (ENSPSIG00000013854) ENSPSIG00000013851 CHP2 (ENSPSIG00000013840) ENSPSIG00000013447 #22 ENSPSIG00000013440 ENSPSIG00000013419 CAPNS1 (ENSPSIG00000012793) ENSPSIG00000012647 ALKBH6 (ENSPSIG00000012465) CLIP3 (ENSPSIG00000011770) WDR62 (ENSPSIG00000011655) ENSPSIG00000011563 POLR2I (ENSPSIG00000011560) ENSPSIG00000011555 TBCB (ENSPSIG00000011403) Testudinoidea ANCESTRAL SPECIES ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Emydidae ANCESTRAL SPECIES 41 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00950000183210.d.b ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00390000001858 #26 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b ENSGT00940000155345 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 62 ENSTMTG00000012328 #10 FBXO48 (ENSTMTG00000012318) #11 PLEK (ENSTMTG00000012307) #12 CNRIP1 (ENSTMTG00000012284) #13 PPP3R1 (ENSTMTG00000012270) PNO1 (ENSTMTG00000012253) #14 DNAAF10 (ENSTMTG00000012232) #15 C1D (ENSTMTG00000012215) #16 ENSTMTG00000012204 ENSTMTG00000012186 #17 ENSTMTG00000012173 MEIS1 (ENSTMTG00000012126) #18 ENSTMTG00000012102 SPRED2 (ENSTMTG00000012084) #19 ACTR2 (ENSTMTG00000012053) #21 RAB1A (ENSTMTG00000012038) #22 CEP68 (ENSTMTG00000012027) #23 ENSTMTG00000012010 #24 SERTAD2 (ENSTMTG00000012002) #25 ENSTMTG00000011985 #26 AFTPH (ENSTMTG00000011932) #27 LGALSL (ENSTMTG00000011905) #28 PELI1 (ENSTMTG00000011887) #29 VPS54 (ENSTMTG00000011848) #30 UGP2 (ENSTMTG00000011829) #31 MDH1 (ENSTMTG00000011807) #34 ENSTMTG00000011798 ENSTMTG00000011785 #35 OTX1 (ENSTMTG00000011768) #36 EHBP1 (ENSTMTG00000011723) #37 TMEM17 (ENSTMTG00000011710) Three-toed box turtle MODERN SPECIES 252 SYCN (ENSTMTG00000005882) ENSTMTG00000005903 SAMD4B (ENSTMTG00000005936) ENSTMTG00000005964 ENSTMTG00000005977 ENSTMTG00000005997 ZFP36 (ENSTMTG00000006024) ENSTMTG00000006034 ENSTMTG00000006046 ENSTMTG00000006064 ENSTMTG00000006105 SUPT5H (ENSTMTG00000006128) TIMM50 (ENSTMTG00000006190) ENSTMTG00000006241 CHP2 (ENSTMTG00000006419) ENSTMTG00000006436 #22 ENSTMTG00000006456 ENSTMTG00000006462 ENSTMTG00000006479 ENSTMTG00000006498 ENSTMTG00000006514 ALKBH6 (ENSTMTG00000006538) ENSTMTG00000006564 ENSTMTG00000006693 ENSTMTG00000006713 ENSTMTG00000006749 POLR2I (ENSTMTG00000006766) ENSTMTG00000006777 TBCB (ENSTMTG00000006797) ENSTMTG00000006812 ENSTMTG00000006820 painted turtle DUPLICATION painted turtle MODERN SPECIES 798 MEIS1 (ENSCPBG00000013258) #18 ENSCPBG00000013254 SPRED2 (ENSCPBG00000013250) #19 ACTR2 (ENSCPBG00000013248) #21 RAB1A (ENSCPBG00000013243) #22 CEP68 (ENSCPBG00000013240) #23 SLC1A4 (ENSCPBG00000013236) #24 SERTAD2 (ENSCPBG00000013231) #25 ENSCPBG00000013228 #26 AFTPH (ENSCPBG00000013222) #27 LGALSL (ENSCPBG00000013218) #28 PELI1 (ENSCPBG00000013208) #29 ENSCPBG00000013207 VPS54 (ENSCPBG00000013204) #30 UGP2 (ENSCPBG00000013202) #31 MDH1 (ENSCPBG00000013198) #34 WDPCP (ENSCPBG00000013191) #35 OTX1 (ENSCPBG00000013188) #36 EHBP1 (ENSCPBG00000009627) #37 ENSCPBG00000009473 painted turtle MODERN SPECIES 879 ENSCPBG00000007080 ENSCPBG00000007056 SLC1A5 (ENSCPBG00000007048) FKRP (ENSCPBG00000007046) STRN4 (ENSCPBG00000007025) PRKD2 (ENSCPBG00000006974) ENSCPBG00000006955 ENSCPBG00000006951 ENSCPBG00000006947 DACT3 (ENSCPBG00000006940) GNG8 (ENSCPBG00000006933) PTGIR (ENSCPBG00000006925) ENSCPBG00000006913 ENSCPBG00000006894 CHP2 (ENSCPBG00000006889) ENSCPBG00000006884 #22 ENSCPBG00000006878 ENSCPBG00000006872 ENSCPBG00000006865 ENSCPBG00000006859 ENSCPBG00000006852 ALKBH6 (ENSCPBG00000006841) ENSCPBG00000006820 ENSCPBG00000006808 WDR62 (ENSCPBG00000006762) ENSCPBG00000006734 POLR2I (ENSCPBG00000006726) ENSCPBG00000006709 TBCB (ENSCPBG00000005327) ENSCPBG00000005289 TMEM160 (ENSCPBG00000005281) Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #8 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327 #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a.d #27 ENSGT00390000001858 #26 ENSGT00940000154186.a.c #27 ENSGT00940000155337 #28 ENSGT00950000183050.b.b.a #29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 ENSGT00940000153899.b.b Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 17 PCSK2 (ENSGEVG00005003616) BFSP1 (ENSGEVG00005003651) ENSGEVG00005003685 #8 APLF (ENSGEVG00005003695) #10 FBXO48 (ENSGEVG00005003719) #11 PLEK (ENSGEVG00005003733) #12 CNRIP1 (ENSGEVG00005003746) #13 PPP3R1 (ENSGEVG00005003753) PNO1 (ENSGEVG00005003766) #14 DNAAF10 (ENSGEVG00005003777) #15 C1D (ENSGEVG00005003784) #16 ENSGEVG00005003795 #17 MEIS1 (ENSGEVG00005003813) #18 SPRED2 (ENSGEVG00005003835) #19 ACTR2 (ENSGEVG00005003844) #21 RAB1A (ENSGEVG00005003898) #22 CEP68 (ENSGEVG00005003967) #23 SLC1A4 (ENSGEVG00005004113) #24 SERTAD2 (ENSGEVG00005004127) #25 ENSGEVG00005004141 #27 ENSGEVG00005004165 #27 ENSGEVG00005004188 LGALSL (ENSGEVG00005004215) #28 PELI1 (ENSGEVG00005004247) #29 VPS54 (ENSGEVG00005004270) #30 UGP2 (ENSGEVG00005004320) #31 MDH1 (ENSGEVG00005004454) #34 ENSGEVG00005008975 #35 OTX1 (ENSGEVG00005009002) #36 EHBP1 (ENSGEVG00005009124) #37 TMEM17 (ENSGEVG00005009491) Goode s thornscrub tortoise MODERN SPECIES 134 SAMD4B (ENSGEVG00005004796) ENSGEVG00005004852 PAF1 (ENSGEVG00005004933) ENSGEVG00005005165 ENSGEVG00005005185 ZFP36 (ENSGEVG00005005222) ENSGEVG00005005234 ENSGEVG00005005255 ENSGEVG00005005277 ENSGEVG00005005321 SUPT5H (ENSGEVG00005005347) TIMM50 (ENSGEVG00005005393) ENSGEVG00005005482 ENSGEVG00005005655 CHP2 (ENSGEVG00005005685) ENSGEVG00005005773 #22 ENSGEVG00005005858 ENSGEVG00005005893 ENSGEVG00005005915 ENSGEVG00005005946 ENSGEVG00005005983 ALKBH6 (ENSGEVG00005006054) CLIP3 (ENSGEVG00005006093) ENSGEVG00005006178 ENSGEVG00005006193 ENSGEVG00005006247 ENSGEVG00005006319 ENSGEVG00005006349 TBCB (ENSGEVG00005006394) ENSGEVG00005006415 ENSGEVG00005006429 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2362 PPP3R1 (ENSCABG00000002502) ENSCABG00000002501 #14 DNAAF10 (ENSCABG00000002500) #15 C1D (ENSCABG00000002499) #16 ENSCABG00000002496 #17 ENSCABG00000002495 #18 MEIS1 (ENSCABG00000002390) #18 SPRED2 (ENSCABG00000002328) #19 ACTR2 (ENSCABG00000002179) #21 RAB1A (ENSCABG00000002171) #22 ENSCABG00000002170 SLC1A4 (ENSCABG00000002166) #24 ENSCABG00000002163 Abingdon island giant tortoise MODERN SPECIES 464 ENSCABG00000008140 PAF1 (ENSCABG00000008106) ENSCABG00000008104 ENSCABG00000008102 ZFP36 (ENSCABG00000008101) ENSCABG00000008099 ENSCABG00000008096 ENSCABG00000008028 ENSCABG00000008019 ENSCABG00000008017 SUPT5H (ENSCABG00000008012) TIMM50 (ENSCABG00000007835) ENSCABG00000007829 ENSCABG00000007828 ENSCABG00000007826 ENSCABG00000007825 #22 ENSCABG00000007815 ENSCABG00000007809 ENSCABG00000007807 ENSCABG00000007804 ALKBH6 (ENSCABG00000007802) CLIP3 (ENSCABG00000007752) ENSCABG00000007751 ENSCABG00000007749 POLR2I (ENSCABG00000007746) ENSCABG00000007742 TBCB (ENSCABG00000007740) ENSCABG00000007739 ENSCABG00000007738 NPAS1 (ENSCABG00000007735) ENSCABG00000007731 Coelacanth MODERN SPECIES 268 SPRED2 (ENSLACG00000010623) #19 ACTR2 (ENSLACG00000012086) #21 zgc:153169 (ENSLACG00000012519) RAB1A (ENSLACG00000012869) #22 ENSLACG00000013207 #23 slc1a4 (ENSLACG00000013894) #24 slc1a4 (ENSLACG00000013933) #24 SERTAD2 (ENSLACG00000014958) #25 AFTPH (ENSLACG00000015062) #27 LGALSL (ENSLACG00000015424) #28 ENSLACG00000015557 PELI1 (ENSLACG00000015880) #29 VPS54 (ENSLACG00000016185) #30 UGP2 (ENSLACG00000016454) #31 MDH1 (ENSLACG00000016626) #34 WDPCP (ENSLACG00000016832) #35 OTX1 (ENSLACG00000017220) #36 EHBP1 (ENSLACG00000017240) #37 ENSLACG00000017727 Actinopterygii ANCESTRAL SPECIES 19 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c.`b.b ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00660000097267 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327.l #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00940000166587 ENSGT00950000183050.b.b.b.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c.`b.b ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327.l #18 ENSGT00940000156841 #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a #27 ENSGT00940000155337 #28 ENSGT00940000166587 ENSGT00950000183050.b.b.b.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Osteoglossocephalai ANCESTRAL SPECIES 39 ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00940000157885 #12 ENSGT00390000004284 #13 ENSGT00940000156530.c.`b.b ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597 #17 ENSGT00940000156327.l #18 ENSGT00940000156841.a.a #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a #34 ENSGT00390000016551 #35 ENSGT00940000161234 #36 ENSGT00940000157597 #37 Clupeocephala ANCESTRAL SPECIES 37 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 #12 ENSGT00390000004284.e #13 ENSGT00940000156530.c.`b.b ENSGT00390000018052 #14 ENSGT00950000183091.A.b #15 ENSGT00390000015405 #16 ENSGT00390000009597.c #17 ENSGT00940000156327.l #18 ENSGT00940000156841.a.a #19 ENSGT00940000154556 #21 ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #23 ENSGT00940000157081 #24 ENSGT00940000155078.a.b.a.a ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263891 Otomorpha ANCESTRAL SPECIES ENSGT00940000154958 #22 Otophysi ANCESTRAL SPECIES ENSGT00940000154958 #22 Cyprinoidei ANCESTRAL SPECIES 30 ENSGT00950000182886.a.a.b.s ENSGT00940000164566.a ENSGT01010000222294.c.b.a.b.a.b.a.b ENSGT01010000222294.c.b.a.b.a.b.a.a.b ENSGT01100000263525.a.b.a.b.b.a ENSGT00390000007688.b ENSGT00950000183135.A.b ENSGT00990000210012 ENSGT00390000009595.b ENSGT00390000013732 ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00940000155078.a.b.a.a.a ENSGT00940000178911 ENSGT00940000154958 #22 ENSGT00530000063867.b.a #25 ENSGT00940000154186.a.r #27 ENSGT00940000155337.`b #28 ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT01030000234958 ENSGT00510000049872 Cyprininae ANCESTRAL SPECIES 139 ENSGT01030000235252.d.a ENSGT01030000235252.d.b ENSGT00940000177102 ENSGT00390000009595.b.d ENSGT00390000013732.j ENSGT00950000183213.a.a.a.g ENSGT00940000160809.c ENSGT00940000155078.a.b.a.a.b ENSGT00940000154958 #22 ENSGT00530000063867.b.a #25 ENSGT00940000154186.a.r.i #27 ENSGT00940000155337.`b.d #28 ENSGT00950000183050.b.b.b.a.a.a.b.g ##29 ENSGT00390000000583.f #30 ENSGT00390000011740.g ENSGT00940000161004 ENSGT00940000159428.e.a.a ENSGT00940000156051.c.b.b ENSGT00530000063711.b.i.a ENSGT00390000013726.d ENSGT00390000000134.a.f.a ENSGT00390000013298.c ENSGT01030000234958 ENSGT00940000159428.e.a.b Cyprininae_a ANCESTRAL SPECIES 211 ENSGT00530000063936.a.a.h ENSGT00940000166147.b ENSGT00390000018759.r ENSGT00950000182886.a.a.b.s.g ENSGT00940000164566.a.e ENSGT00940000163334.d.l.b ENSGT01010000222294.c.b.a.b.a.b.a.b.a ENSGT01010000222294.c.b.a.b.a.b.a.a.b ENSGT01100000263525.a.b.a.b.b.a ENSGT00950000183135.A.b ENSGT00390000009595.b.d ENSGT00390000013732.j ENSGT00950000183213.a.a.a.g ENSGT00940000160809.c ENSGT00940000155078.a.b.a.a.b ENSGT00940000154958 #22 ENSGT00530000063867.b.a #25 ENSGT00940000154186.a.r.i.a #27 ENSGT00940000155337.`b.d #28 ENSGT00950000183050.b.b.b.a.a.a.b.g ##29 ENSGT00390000000583.f #30 ENSGT00390000011740.g ENSGT00940000161004 ENSGT00940000159428.e.a.b ENSGT00940000156051.c.b.a ENSGT00390000000134.a.f.b ENSGT00390000013298.d ENSGT00730000112219 ENSGT00390000010434.b.n ENSGT00940000166659.j ENSGT00940000166659.i.b Common carp reference DUPLICATION Common carp reference MODERN SPECIES 27 ENSCCRG00000070081 ENSCCRG00000009918 ENSCCRG00000074442 ENSCCRG00000039587 ENSCCRG00000009894 ENSCCRG00000009892 ENSCCRG00000034935 ENSCCRG00000034938 si:ch211-286b5.5 (ENSCCRG00000060149) ENSCCRG00000029782 mri1 (ENSCCRG00000062632) zgc:158803 (ENSCCRG00000000658) pane1 (ENSCCRG00000063559) mb (ENSCCRG00000005769) ENSCCRG00000064146 ENSCCRG00000028890 #22 aftpha (ENSCCRG00000005761) #27 lgalsla (ENSCCRG00000005755) #28 ENSCCRG00000005752 ##29 vps54 (ENSCCRG00000021698) #30 ENSCCRG00000023691 ENSCCRG00000023693 ENSCCRG00000023699 khsrp (ENSCCRG00000023737) ENSCCRG00000023741 crtac1a (ENSCCRG00000023744) golga7ba (ENSCCRG00000076611) zfyve27 (ENSCCRG00000023777) ENSCCRG00000024682 ENSCCRG00000003859 ENSCCRG00000063326 Common carp reference MODERN SPECIES 22 ENSCCRG00000000044 ENSCCRG00000067200 ENSCCRG00000000041 ENSCCRG00000000042 ENSCCRG00000060402 ENSCCRG00000009903 ENSCCRG00000058282 ENSCCRG00000036319 ENSCCRG00000039598 ENSCCRG00000058943 ENSCCRG00000000444 ENSCCRG00000079013 ENSCCRG00000074250 ENSCCRG00000000498 mb (ENSCCRG00000028699) ENSCCRG00000070586 #22 ENSCCRG00000068299 #25 aftpha (ENSCCRG00000068040) #27 lgalsla (ENSCCRG00000057927) #28 ENSCCRG00000077908 ##29 vps54 (ENSCCRG00000021668) #30 ENSCCRG00000021673 khsrp (ENSCCRG00000002491) golga7ba (ENSCCRG00000061429) zfyve27 (ENSCCRG00000031705) ENSCCRG00000063636 pi4k2a (ENSCCRG00000024458) cdc25d (ENSCCRG00000024507) ENSCCRG00000081744 pgam1b (ENSCCRG00000065548) exosc1 (ENSCCRG00000024520) Characiphysae ANCESTRAL SPECIES ENSGT00940000154958 #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000154958 #22 Characoidei ANCESTRAL SPECIES ENSGT00940000154958 #22 Mexicana tetra MODERN SPECIES 3 ENSAMXG00000032384 ENSAMXG00000039556 ENSAMXG00000030599 ENSAMXG00000007630 ENSAMXG00000029205 ENSAMXG00000035878 ENSAMXG00000012113 si:ch211-286b5.5 (ENSAMXG00000012105) ENSAMXG00000012102 ENSAMXG00000034714 CC2D1A (ENSAMXG00000012041) mri1 (ENSAMXG00000011982) zgc:158803 (ENSAMXG00000042216) pane1 (ENSAMXG00000036381) mb (ENSAMXG00000030396) ENSAMXG00000034850 #22 ENSAMXG00000029475 ENSAMXG00000030121 #27 aftpha (ENSAMXG00000033598) #27 lgalsla (ENSAMXG00000032614) #28 ENSAMXG00000038207 ##29 vps54 (ENSAMXG00000011759) #30 ENSAMXG00000030674 ENSAMXG00000011734 ENSAMXG00000011724 khsrp (ENSAMXG00000036582) ENSAMXG00000011674 crtac1a (ENSAMXG00000011545) golga7ba (ENSAMXG00000032870) zfyve27 (ENSAMXG00000040197) ENSAMXG00000024931 Euteleosteomorpha ANCESTRAL SPECIES 18 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.b ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000163878 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154958 #22 Salmoninae ANCESTRAL SPECIES 423 ENSGT00950000183118.A.c.b.b ENSGT00950000183068.a.a.a.a.c.a ENSGT00940000165121.a.i ENSGT00940000158132.n.a ENSGT00940000154651.a.g ENSGT00940000153609.a.r.a ENSGT00940000154833.a.g.a ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000160788.m.a ENSGT00940000162313.b.d ENSGT00950000182887.C.b.b.a.e ENSGT00390000008727.a.a.c ENSGT00390000013169.d ENSGT00940000153370.a.a.f ENSGT00940000161027.a.b ENSGT00940000154958 #22 ENSGT00990000209053 ENSGT00940000156996.f.a.a.d ENSGT00940000156774.o ENSGT00940000164309.u ENSGT00940000153609.a.r.b ENSGT00940000154651.a.h ENSGT00940000158132.n.b ENSGT00940000165121.a.j ENSGT00950000183068.a.a.a.a.c.b Huchen MODERN SPECIES 961 ENSHHUG00000028340 dpp3 (ENSHHUG00000028252) il2rga (ENSHHUG00000028228) slc9a6b (ENSHHUG00000027781) fhl1b (ENSHHUG00000027670) htatsf1 (ENSHHUG00000027652) ENSHHUG00000027651 tmtops3b (ENSHHUG00000027611) ZIC3 (ENSHHUG00000027607) fgf13b (ENSHHUG00000027569) arr3a (ENSHHUG00000027492) ENSHHUG00000027481 znrd2 (ENSHHUG00000027480) FAM89B (ENSHHUG00000027479) EHBP1L1 (ENSHHUG00000027444) ENSHHUG00000027171 #22 ENSHHUG00000027137 ENSHHUG00000027106 il2rga (ENSHHUG00000027092) hif1al2 (ENSHHUG00000027078) snx12 (ENSHHUG00000027069) slc7a3a (ENSHHUG00000026971) RAB39B (ENSHHUG00000026964) ENSHHUG00000026960 ENSHHUG00000026902 Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000157436.b.b ENSGT00940000165459.a.a.b.d ENSGT00390000007335.d ENSGT00940000164309.t ENSGT00940000153460.c.b.c.b ENSGT00940000154833.a.g.b ENSGT00940000156341.e.a ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000160788.m.a ENSGT00940000162313.b.d ENSGT00950000182887.C.b.b.a.e ENSGT00390000008727.a.a.c ENSGT00390000013169.d ENSGT00940000153370.a.a.f ENSGT00940000161027.a.b ENSGT00940000154958 #22 ENSGT00990000209053 ENSGT00940000156996.f.a.a.d ENSGT00940000156774.o ENSGT00940000164309.u ENSGT00940000153609.a.r.b ENSGT00940000154651.a.h ENSGT00940000158132.n.b ENSGT00940000165121.a.j ENSGT00950000183068.a.a.a.a.c.b ENSGT00510000050937.f ENSGT00940000153763.a.d.a.b ENSGT01070000253816.a.a.a.c.b ENSGT01050000244937.a.b.a.b.d ENSGT00950000182962.a.b.b.d ENSGT01060000248564.b.a.b.b.b.b.f Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00940000157436.b.b ENSGT00940000165459.a.a.b.d ENSGT00390000007335.d ENSGT00940000164309.t ENSGT00940000153460.c.b.c.b ENSGT00940000154833.a.g.b ENSGT00940000156341.e.a ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000160788.m.a ENSGT00940000162313.b.d ENSGT00950000182887.C.b.b.a.e ENSGT00390000008727.a.a.c ENSGT00390000013169.d ENSGT00940000153370.a.a.f ENSGT00940000161027.a.b ENSGT00940000154958 #22 ENSGT00990000209053 ENSGT00940000156996.f.a.a.d ENSGT00940000156774.o ENSGT00940000164309.u ENSGT00940000153609.a.r.b ENSGT00940000154651.a.h ENSGT00940000158132.n.b ENSGT00940000165121.a.j ENSGT00950000183068.a.a.a.a.c.b ENSGT00510000050937.f ENSGT00940000153763.a.d.a.b ENSGT01070000253816.a.a.a.c.b ENSGT00940000160459 ENSGT01050000244937.a.b.a.b.d ENSGT00950000182962.a.b.b.d Rainbow trout MODERN SPECIES 364 dpp3 (ENSOMYG00000040545) slc9a6b (ENSOMYG00000041463) il2rc2 (ENSOMYG00000041376) fhl1b (ENSOMYG00000041803) ENSOMYG00000041811 tmtops3b (ENSOMYG00000041819) ENSOMYG00000041821 fgf13b (ENSOMYG00000036820) ENSOMYG00000069284 arr3a (ENSOMYG00000041902) ENSOMYG00000041972 znrd2 (ENSOMYG00000041986) ENSOMYG00000041989 EHBP1L1 (ENSOMYG00000042050) ENSOMYG00000076294 ENSOMYG00000042612 #22 ENSOMYG00000042746 ENSOMYG00000042750 ENSOMYG00000042767 ENSOMYG00000066926 il2rgamma (ENSOMYG00000042785) snx12 (ENSOMYG00000054859) slc7a3a (ENSOMYG00000042826) ENSOMYG00000074385 ENSOMYG00000067049 ENSOMYG00000058080 leap-2b (ENSOMYG00000042923) ENSOMYG00000046065 tnfsf10l3 (ENSOMYG00000043264) ENSOMYG00000043286 ENSOMYG00000064551 Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00950000183209.a.a.b.c.b ENSGT00940000157436.b.b ENSGT00940000165459.a.a.b.d ENSGT00390000007335.d ENSGT00940000164309.t ENSGT00940000153460.c.b.c.b ENSGT00940000154833.a.g.b ENSGT00940000156341.e.a ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000162313.b.d ENSGT00950000182887.C.b.b.a.e ENSGT00390000008727.a.a.c ENSGT00390000013169.d ENSGT00940000153370.a.a.f ENSGT00940000161027.a.b ENSGT00940000154958 #22 ENSGT00990000209053 ENSGT00940000156996.f.a.a.d ENSGT00940000156774.o ENSGT00940000164309.u ENSGT00940000153609.a.r.b ENSGT00940000154651.a.h ENSGT00940000158132.n.b ENSGT00940000165121.a.j ENSGT00950000183068.a.a.a.a.c.b ENSGT00510000050937.f ENSGT00940000153763.a.d.a.b ENSGT01070000253816.a.a.a.c.b ENSGT00940000160459 ENSGT01050000244937.a.b.a.b.d ENSGT00950000182962.a.b.b.d Chinook salmon MODERN SPECIES 26 rbm14a (ENSOTSG00005013175) ENSOTSG00005013172 dpp3 (ENSOTSG00005011481) il2rga (ENSOTSG00005011474) slc9a6b (ENSOTSG00005010740) fhl1b (ENSOTSG00005010739) ENSOTSG00005010737 tmtops3b (ENSOTSG00005010736) ENSOTSG00005010735 fgf13b (ENSOTSG00005010734) arr3a (ENSOTSG00005010627) ENSOTSG00005010624 znrd2 (ENSOTSG00005010623) FAM89B (ENSOTSG00005010622) EHBP1L1 (ENSOTSG00005007654) ENSOTSG00005007323 #22 ENSOTSG00005007322 hif1al2 (ENSOTSG00005007314) ENSOTSG00005007313 il2rga (ENSOTSG00005007311) snx12 (ENSOTSG00005007310) slc7a3a (ENSOTSG00005007176) RAB39B (ENSOTSG00005007172) ENSOTSG00005007168 ENSOTSG00005007164 ENSOTSG00005007163 CLCN5 (ENSOTSG00005007128) tnfsf10l3 (ENSOTSG00005007122) ENSOTSG00005007120 ENSOTSG00005006986 ENSOTSG00005006985 Coho salmon MODERN SPECIES 21 pacs1a (ENSOKIG00005044587) rbm14a (ENSOKIG00005044504) ENSOKIG00005044408 dpp3 (ENSOKIG00005044072) ENSOKIG00005044015 slc9a6b (ENSOKIG00005042626) fhl1b (ENSOKIG00005042229) ENSOKIG00005042208 tmtops3b (ENSOKIG00005042186) fgf13b (ENSOKIG00005042071) arr3a (ENSOKIG00005041601) ENSOKIG00005041501 znrd2 (ENSOKIG00005041459) FAM89B (ENSOKIG00005041446) EHBP1L1 (ENSOKIG00005041235) ENSOKIG00005040987 #22 ENSOKIG00005040935 ENSOKIG00005040925 hif1al2 (ENSOKIG00005040881) ENSOKIG00005040755 snx12 (ENSOKIG00005040716) slc7a3a (ENSOKIG00005040560) RAB39B (ENSOKIG00005040539) ENSOKIG00005040527 ENSOKIG00005040482 ENSOKIG00005040472 ENSOKIG00005040457 CLCN5 (ENSOKIG00005039764) tnfsf10l3 (ENSOKIG00005039752) ENSOKIG00005039729 ENSOKIG00005039616 Salmo ANCESTRAL SPECIES 1 ENSGT00950000183209.a.a.b.c.b ENSGT00940000157436.b.b ENSGT00940000165459.a.a.b.d ENSGT00390000007335.d ENSGT00940000164309.t ENSGT00940000153460.c.b.c.b ENSGT00940000154833.a.g.a ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000162313.b.d ENSGT00950000182887.C.b.b.a.e ENSGT00390000008727.a.a.c ENSGT00390000013169.d ENSGT00940000153370.a.a.f ENSGT00940000161027.a.b ENSGT00940000155078.b.d ENSGT00940000154958 #22 ENSGT00990000209053 ENSGT00940000156996.f.a.a.d ENSGT00940000156774.o ENSGT00940000164309.u ENSGT00940000153609.a.r.b ENSGT00940000154651.a.h ENSGT00940000158132.n.b ENSGT00950000183068.a.a.a.a.c.b ENSGT00940000176224 ENSGT00940000153763.a.d.a.b ENSGT01070000253816.a.a.a.c.b ENSGT01050000244937.a.b.a.b.d ENSGT00950000182962.a.b.b.d ENSGT01060000248564.b.a.b.b.b.b.f ENSGT00950000182963.b.b.x.b River trout MODERN SPECIES 3 pacs1a (ENSSTUG00000011109) ENSSTUG00000011360 rbm14a (ENSSTUG00000011379) ENSSTUG00000011463 dpp3 (ENSSTUG00000011636) il2rga (ENSSTUG00000012904) slc9a6b (ENSSTUG00000013042) fhl1b (ENSSTUG00000013919) tmtops3b (ENSSTUG00000013931) fgf13b (ENSSTUG00000013960) arr3a (ENSSTUG00000014006) ENSSTUG00000014122 znrd2 (ENSSTUG00000014137) FAM89B (ENSSTUG00000014148) EHBP1L1 (ENSSTUG00000014170) ENSSTUG00000014260 #22 ENSSTUG00000014460 ENSSTUG00000014473 hif1al2 (ENSSTUG00000014485) il2rga (ENSSTUG00000014496) snx12 (ENSSTUG00000014504) slc7a3a (ENSSTUG00000014590) RAB39B (ENSSTUG00000015013) ENSSTUG00000015034 ENSSTUG00000015171 CLCN5 (ENSSTUG00000015514) tnfsf10l3 (ENSSTUG00000018052) ENSSTUG00000018058 ENSSTUG00000018078 ENSSTUG00000018101 ENSSTUG00000018108 Acanthomorphata ANCESTRAL SPECIES 78 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000163878 Euacanthomorphacea ANCESTRAL SPECIES 37 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000163878 Pinecone sodierfish MODERN SPECIES irf2bp2b (ENSMMDG00005007824) map1lc3c (ENSMMDG00005007826) strn (ENSMMDG00005007845) ENSMMDG00005008307 esf1 (ENSMMDG00005008361) ndufaf5 (ENSMMDG00005008365) ENSMMDG00005008402 snrpb2 (ENSMMDG00005008460) ENSMMDG00005008468 cnrip1a (ENSMMDG00005008472) #13 ppp3r1b (ENSMMDG00005008478) ENSMMDG00005008491 #17 ENSMMDG00005008505 #18 SPRED2 (ENSMMDG00005008521) #19 ACTR2 (ENSMMDG00005008542) #21 RAB1A (ENSMMDG00005008549) #22 ENSMMDG00005008554 #25 aftpha (ENSMMDG00005008560) #27 ENSMMDG00005008562 lgalsla (ENSMMDG00005008564) #28 slc29a2 (ENSMMDG00005008565) ENSMMDG00005008567 ##29 vps54 (ENSMMDG00005008574) #30 ugp2a (ENSMMDG00005009111) #31 mdh1aa (ENSMMDG00005010643) #34 otx2a (ENSMMDG00005010720) ENSMMDG00005010726 b3gnt2a (ENSMMDG00005010730) commd1 (ENSMMDG00005010733) ENSMMDG00005010735 ENSMMDG00005010738 Percomorphaceae ANCESTRAL SPECIES 37 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT01030000235154 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000154958 #22 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000163878 ENSGT00940000158659 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154958 #22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000154958 #22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000154958 #22 Carangaria ANCESTRAL SPECIES ENSGT00940000154958 #22 Carangaria_A ANCESTRAL SPECIES ENSGT00940000154958 #22 Seriola ANCESTRAL SPECIES ENSGT00940000154958 #22 Greater amberjack MODERN SPECIES 209 ENSSDUG00000022609 ENSSDUG00000022600 #17 ENSSDUG00000022587 #18 SPRED2 (ENSSDUG00000022578) #19 ACTR2 (ENSSDUG00000022560) #21 ENSSDUG00000022546 RAB1A (ENSSDUG00000022535) #22 ENSSDUG00000022528 #27 ENSSDUG00000022520 aftpha (ENSSDUG00000022518) #27 slc8a1a (ENSSDUG00000022509) ENSSDUG00000022503 ENSSDUG00000022496 ENSSDUG00000022495 psen2 (ENSSDUG00000022491) dpy30 (ENSSDUG00000022485) srd5a2a (ENSSDUG00000022479) TMEM63B (ENSSDUG00000022468) kat14 (ENSSDUG00000022453) dzank1 (ENSSDUG00000022443) ENSSDUG00000022439 polr3f (ENSSDUG00000022435) Anabantaria ANCESTRAL SPECIES ENSGT00940000154958 #22 Anabantoidei ANCESTRAL SPECIES ENSGT00940000154958 #22 Siamese fighting fish MODERN SPECIES capn2b (ENSBSLG00000000777) capn1b (ENSBSLG00000001274) mrps28 (ENSBSLG00000001344) sde2 (ENSBSLG00000001347) mtif2 (ENSBSLG00000001366) ENSBSLG00000001501 polr3f (ENSBSLG00000001592) DZANK1 (ENSBSLG00000001622) PET117 (ENSBSLG00000001683) TMEM63B (ENSBSLG00000001773) srd5a2a (ENSBSLG00000001931) dpy30 (ENSBSLG00000001938) psen2 (ENSBSLG00000002178) ENSBSLG00000002558 slc8a1a (ENSBSLG00000002577) ENSBSLG00000002719 #22 SPRED2 (ENSBSLG00000002884) #19 ENSBSLG00000002896 #18 ENSBSLG00000002999 #17 ENSBSLG00000003000 cnrip1a (ENSBSLG00000003001) #13 fbxo48 (ENSBSLG00000003002) #11 ENSBSLG00000003584 #10 prokr1a (ENSBSLG00000003664) snrpb2 (ENSBSLG00000003708) KIF16B (ENSBSLG00000004029) ENSBSLG00000004483 ndufaf5 (ENSBSLG00000004485) esf1 (ENSBSLG00000004492) map1lc3c (ENSBSLG00000004865) strn (ENSBSLG00000005350) Eupercaria ANCESTRAL SPECIES 2 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000155078.a.b.a.a ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00990000213804 ENSGT00940000163878 Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT01040000240400.c.a.b.a.b.a.a.b.b ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00990000213804 ENSGT00940000163878 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00990000213804 ENSGT00940000163878 Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.j ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a.a.b ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00990000213804 ENSGT00940000163878 ENSGT00940000158659 Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a.a.a.a ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a.a.b ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000158659 ENSGT00940000153408.B.s.b ENSGT00940000157824.i.a European seabass MODERN SPECIES 20 ENSDLAG00005026627 ENSDLAG00005033084 ENSDLAG00005019304 ENSDLAG00005034351 ENSDLAG00005025247 ENSDLAG00005025252 ENSDLAG00005003427 ENSDLAG00005033994 ENSDLAG00005003360 ENSDLAG00005003298 ENSDLAG00005003260 ENSDLAG00005031613 SPRED2 (ENSDLAG00005021828) #19 ENSDLAG00005032979 #21 ENSDLAG00005029588 RAB1A (ENSDLAG00005035043) #22 ENSDLAG00005006908 #25 ENSDLAG00005028918 #27 ENSDLAG00005029267 ENSDLAG00005006861 ##29 ugp2a (ENSDLAG00005006357) #31 VPS54 (ENSDLAG00005006511) #30 ENSDLAG00005006165 #34 otx2a (ENSDLAG00005006154) ENSDLAG00005034687 ENSDLAG00005030008 ENSDLAG00005011667 b3gnt2a (ENSDLAG00005032538) commd1 (ENSDLAG00005033691) ENSDLAG00005005654 ENSDLAG00005005184 Large yellow croaker MODERN SPECIES 481 KIF16B (ENSLCRG00005017763) snrpb2 (ENSLCRG00005017778) prokr1a (ENSLCRG00005017781) ENSLCRG00005017783 #10 fbxo48 (ENSLCRG00005017784) #11 cnrip1a (ENSLCRG00005017786) #13 ENSLCRG00005017789 ENSLCRG00005017792 ENSLCRG00005017794 ENSLCRG00005017797 #17 ENSLCRG00005017803 #18 SPRED2 (ENSLCRG00005017808) #19 ACTR2 (ENSLCRG00005017810) #21 ENSLCRG00005017829 ENSLCRG00005017830 RAB1A (ENSLCRG00005017831) #22 ENSLCRG00005017834 #25 aftpha (ENSLCRG00005017835) #27 lgalsla (ENSLCRG00005017838) #28 slc29a2 (ENSLCRG00005017839) ENSLCRG00005017841 ##29 vps54 (ENSLCRG00005017864) #30 ugp2a (ENSLCRG00005018763) #31 mdh1aa (ENSLCRG00005018780) #34 otx2a (ENSLCRG00005018806) ENSLCRG00005018810 b3gnt2a (ENSLCRG00005000207) commd1 (ENSLCRG00005000214) USP34 (ENSLCRG00005000282) XPO1 (ENSLCRG00005000379) ENSLCRG00005000395 Perciformes ANCESTRAL SPECIES 2 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000155636.b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.a ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000155078.a.b.a.a ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.b ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000158659 ENSGT00940000153408.B.s.b Cottioidei ANCESTRAL SPECIES 3 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT01030000235154 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT00940000155078.a.b.a.a ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.b ENSGT00390000011698.c.a.b ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000155337.`b #28 ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263891 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000158659 ENSGT00940000153408.B.s.b ENSGT00940000157824.i.a ENSGT00940000178862 Lumpfish MODERN SPECIES snrpb2 (ENSCLMG00005012375) APLF (ENSCLMG00005012402) #10 prokr1a (ENSCLMG00005012404) fbxo48 (ENSCLMG00005012405) #11 cnrip1a (ENSCLMG00005012406) #13 ppp3r1b (ENSCLMG00005012407) ENSCLMG00005012507 ENSCLMG00005012508 ENSCLMG00005012510 ENSCLMG00005012511 ENSCLMG00005012513 #18 ENSCLMG00005012515 SPRED2 (ENSCLMG00005012517) #19 ACTR2 (ENSCLMG00005012519) #21 ENSCLMG00005012639 RAB1A (ENSCLMG00005012641) #22 ENSCLMG00005012745 #25 aftpha (ENSCLMG00005012747) #27 ENSCLMG00005012748 lgalsla (ENSCLMG00005012749) #28 ENSCLMG00005012751 ENSCLMG00005012752 ##29 vps54 (ENSCLMG00005012756) #30 ugp2a (ENSCLMG00005012905) #31 mdh1aa (ENSCLMG00005013040) #34 otx2a (ENSCLMG00005013346) ENSCLMG00005013347 b3gnt2a (ENSCLMG00005013348) commd1 (ENSCLMG00005013349) USP34 (ENSCLMG00005013361) XPO1 (ENSCLMG00005014924) Perciformes_a ANCESTRAL SPECIES ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154556.a.a #21 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.a.a ENSGT00940000154958 #22 ENSGT00530000063867.b #25 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155337.`b #28 ENSGT00950000182898.a.a.a.a.a.h ENSGT00950000183050.b.b.b.a.a.a.b ##29 ENSGT00390000000583 #30 ENSGT00940000153464.B.z.a #31 ENSGT00530000063410.a.q.b #34 ENSGT00940000167432 ENSGT01100000263601 ENSGT00940000155345.r ENSGT00390000012029 ENSGT00940000158659 ENSGT00940000153408.B.s.b Channel bull blenny MODERN SPECIES fbxo48 (ENSCGOG00000000040) #11 cnrip1a (ENSCGOG00000000039) #13 ENSCGOG00000000038 ENSCGOG00000000037 ENSCGOG00000000036 ENSCGOG00000000035 etaa1a (ENSCGOG00000000034) #17 ENSCGOG00000000033 #18 SPRED2 (ENSCGOG00000000032) #19 ENSCGOG00000000031 ACTR2 (ENSCGOG00000000030) #21 ENSCGOG00000000029 ENSCGOG00000000028 ENSCGOG00000000027 ENSCGOG00000000026 RAB1A (ENSCGOG00000000025) #22 ENSCGOG00000000023 #25 aftpha (ENSCGOG00000000022) #27 lgalsla (ENSCGOG00000000021) #28 ENSCGOG00000000019 ENSCGOG00000000018 ENSCGOG00000000017 slc29a2 (ENSCGOG00000000016) ENSCGOG00000000015 ##29 vps54 (ENSCGOG00000000014) #30 ugp2a (ENSCGOG00000000013) #31 mdh1aa (ENSCGOG00000000012) #34 otx2a (ENSCGOG00000000011) ENSCGOG00000000009 b3gnt2a (ENSCGOG00000000008) commd1 (ENSCGOG00000000007) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 3666 ENSLBEG00000010006 #22 Ballan wrasse MODERN SPECIES 886 SPRED2 (ENSLBEG00000028448) #19 ENSLBEG00000028435 ENSLBEG00000028431 #21 ENSLBEG00000028430 RAB1A (ENSLBEG00000028426) #22 ENSLBEG00000028423 ENSLBEG00000028420 #27 ENSLBEG00000028418 Ovalentaria ANCESTRAL SPECIES ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.`b.a ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.a ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00390000003866.a.a.f ENSGT00940000156258.f.b ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 Atherinomorphae ANCESTRAL SPECIES 30 ENSGT00940000167000 ENSGT01030000234626.C ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00390000003866.a.a.f ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 ENSGT00940000158908.m.a Cyprinodontiformes ANCESTRAL SPECIES 31 ENSGT00940000167000 ENSGT01030000234626.C ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00390000003866.a.a.f ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 ENSGT00940000154864.a.a Cyprinodontoidei ANCESTRAL SPECIES 44 ENSGT00940000167000 ENSGT01030000234626.C ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.b ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t.a ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00390000003866.a.a.f ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 ENSGT00940000154864.a.a ENSGT00940000155564.n Poeciliinae ANCESTRAL SPECIES 9 ENSGT00950000183095.a.b.a.b.b.a ENSGT00390000009477.t.b ENSGT00940000167000 ENSGT01030000234626.C ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t.a ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 ENSGT00940000154864.a.a ENSGT00940000155564.n ENSGT00900000141103 ENSGT00530000063402.b Poecilia ANCESTRAL SPECIES 36 ENSGT00950000183095.a.b.a.b.b.a ENSGT00390000009477.t.b ENSGT00940000167000 ENSGT01030000234626.C ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t.a ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.a ENSGT00940000154186.a.r #27 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 ENSGT00940000154864.a.a ENSGT00940000155564.n ENSGT00900000141103 NAME_6 ANCESTRAL SPECIES 437 ENSGT00940000156530.c.ab ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000177082 ENSGT00940000154186.a.r #27 ENSGT00940000155129.B Sailfin molly MODERN SPECIES 1612 ENSPLAG00000015539 ENSPLAG00000015551 #17 SPRED2 (ENSPLAG00000015573) #19 ENSPLAG00000015592 #22 ENSPLAG00000015610 aftpha (ENSPLAG00000015618) #27 slc8a1a (ENSPLAG00000015800) Amazon molly MODERN SPECIES 1222 ENSPFOG00000000592 SPRED2 (ENSPFOG00000000561) #19 ENSPFOG00000000498 #22 aftpha (ENSPFOG00000000472) #27 Platyfish MODERN SPECIES 19 ENSXMAG00000023800 btbd3a (ENSXMAG00000017637) acaa1 (ENSXMAG00000017640) esf1 (ENSXMAG00000017651) ndufaf5 (ENSXMAG00000017654) gas8 (ENSXMAG00000017665) ENSXMAG00000026500 ENSXMAG00000021124 ENSXMAG00000022845 snrpb2 (ENSXMAG00000000699) ENSXMAG00000023522 #10 fbxo48 (ENSXMAG00000026821) #11 cnrip1a (ENSXMAG00000029354) #13 ENSXMAG00000027364 #17 SPRED2 (ENSXMAG00000027999) #19 ENSXMAG00000015776 #22 aftpha (ENSXMAG00000027245) #27 ENSXMAG00000021545 ENSXMAG00000026720 ENSXMAG00000024168 ENSXMAG00000025445 slc8a1a (ENSXMAG00000015733) psen2 (ENSXMAG00000009831) dpy30 (ENSXMAG00000022052) srd5a2a (ENSXMAG00000009822) TMEM63B (ENSXMAG00000009775) PET117 (ENSXMAG00000009773) kat14 (ENSXMAG00000009770) ENSXMAG00000009755 polr3f (ENSXMAG00000004604) SPTBN1 (ENSXMAG00000004511) NAME_4 ANCESTRAL SPECIES 256 ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000156530.c.ab ENSGT01030000235154 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.a ENSGT00940000177082 ENSGT00940000154186.a.r #27 ENSGT00940000155129.B ENSGT00950000183209.b.a.b.h ENSGT00950000183209.b.a.b.g ENSGT00390000003866.a.a.f Mummichog MODERN SPECIES 647 snrpb2 (ENSFHEG00000014266) prokr1a (ENSFHEG00000014272) APLF (ENSFHEG00000014277) #10 fbxo48 (ENSFHEG00000014283) #11 cnrip1a (ENSFHEG00000014292) #13 ENSFHEG00000014302 ENSFHEG00000014310 ENSFHEG00000014353 ENSFHEG00000014367 SPRED2 (ENSFHEG00000014393) #19 ENSFHEG00000014414 #22 ENSFHEG00000014430 #27 ENSFHEG00000000824 ENSFHEG00000014476 slc8a1a (ENSFHEG00000014525) ENSFHEG00000014546 ENSFHEG00000014562 gas8 (ENSFHEG00000014602) KIF16B (ENSFHEG00000014787) ndufaf5 (ENSFHEG00000014825) acaa1 (ENSFHEG00000014889) ENSFHEG00000014909 btbd3a (ENSFHEG00000014929) esf1 (ENSFHEG00000014984) ENSFHEG00000000369 ENSFHEG00000015003 Aplocheiloidei ANCESTRAL SPECIES 119 ENSGT00390000006915.d.j.a ENSGT00940000166218 ENSGT00950000183095.a.b.a.b.b.a ENSGT00940000167000 ENSGT01030000234626.C ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000009597.d #17 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000155078.a.b.a.a ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000176860 ENSGT00940000155129.B Mangrove rivulus MODERN SPECIES 989 ENSKMAG00000013969 #17 SPRED2 (ENSKMAG00000014009) #19 ENSKMAG00000014038 #22 Oryzias ANCESTRAL SPECIES ENSGT00940000154958 #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000154958 #22 Chinese medaka MODERN SPECIES 5148 RAB1A (ENSOSIG00000018110) #22 ENSOSIG00000018107 #26 ENSOSIG00000018105 #27 Ovalentaria_B ANCESTRAL SPECIES 36 ENSGT00390000009597.d #17 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00390000003866.a.a.f ENSGT00940000156258.f.b ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 Pomacentridae ANCESTRAL SPECIES 304 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 Pomacentridae_A ANCESTRAL SPECIES 83 ENSGT00940000154864.a.a ENSGT00390000009679 ENSGT00390000000549.bb ENSGT00390000000549.cb ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000157084.e.a ENSGT00950000182886.b.a.b ENSGT00390000008808.q ENSGT00940000157923 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00940000177082 ENSGT00940000154186.a.r #27 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000156327.k #18 ENSGT00390000009597.d #17 ENSGT00940000166218 ENSGT00950000183095.a.b.a.b.b.a ENSGT00940000167000 ENSGT01030000234626.C ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 Amphiprion ANCESTRAL SPECIES 124 ENSGT00940000165949 ENSGT00390000002886.a.a.a ENSGT00940000156222.a.b ENSGT00930000151032.A.c.a ENSGT00390000009298 ENSGT00390000013127.b ENSGT00390000010052.b ENSGT00940000175728 ENSGT00940000153974.A ENSGT00940000157923 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00940000177082 ENSGT00940000154186.a.r #27 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00390000009597.d #17 ENSGT00940000166218 ENSGT00950000183095.a.b.a.b.b.a ENSGT00940000167000 ENSGT01030000234626.C ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT00940000168028 Orange clownfish MODERN SPECIES 17 ENSAPEG00000022754 ENSAPEG00000022728 alkbh5 (ENSAPEG00000022697) mief2 (ENSAPEG00000022682) smcr8b (ENSAPEG00000022674) ENSAPEG00000022651 PTCD1 (ENSAPEG00000022632) psen2 (ENSAPEG00000022613) slc8a1a (ENSAPEG00000022587) ENSAPEG00000022581 ENSAPEG00000022553 ENSAPEG00000022545 ENSAPEG00000022531 aftpha (ENSAPEG00000022525) #27 SPRED2 (ENSAPEG00000022501) #19 ENSAPEG00000022488 #22 ENSAPEG00000022475 #17 map1lc3c (ENSAPEG00000022466) strn (ENSAPEG00000022429) btbd3a (ENSAPEG00000022414) acaa1 (ENSAPEG00000022396) esf1 (ENSAPEG00000022385) ndufaf5 (ENSAPEG00000022351) gas8 (ENSAPEG00000022335) KIF16B (ENSAPEG00000022252) snrpb2 (ENSAPEG00000022231) prokr1a (ENSAPEG00000022223) APLF (ENSAPEG00000022214) #10 ENSAPEG00000022203 fbxo48 (ENSAPEG00000022199) #11 cnrip1a (ENSAPEG00000022193) #13 Clown anemonefish MODERN SPECIES 2334 PTCD1 (ENSAOCG00000020741) psen2 (ENSAOCG00000020726) slc8a1a (ENSAOCG00000020709) ENSAOCG00000001985 aftpha (ENSAOCG00000020649) #27 ENSAOCG00000020643 SPRED2 (ENSAOCG00000020630) #19 ENSAOCG00000020606 #22 ENSAOCG00000020579 Spiny chromis MODERN SPECIES 1371 kat14 (ENSAPOG00000008691) ENSAPOG00000008636 ENSAPOG00000008622 ENSAPOG00000008609 ENSAPOG00000008595 srd5a2a (ENSAPOG00000008584) dpy30 (ENSAPOG00000008560) psen2 (ENSAPOG00000008472) ENSAPOG00000008404 slc8a1a (ENSAPOG00000008275) ENSAPOG00000008237 spast (ENSAPOG00000008209) aftpha (ENSAPOG00000008199) #27 ENSAPOG00000008184 SPRED2 (ENSAPOG00000008161) #19 ENSAPOG00000008143 #22 ENSAPOG00000008132 #18 ENSAPOG00000008119 #17 map1lc3c (ENSAPOG00000008104) strn (ENSAPOG00000008068) Bicolor damselfish MODERN SPECIES 2653 ENSSPAG00000012526 #17 SPRED2 (ENSSPAG00000012547) #19 ENSSPAG00000012564 #22 Cichlidae ANCESTRAL SPECIES 32 ENSGT01030000234626.C ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b ENSGT00940000156530.c.`b.a ENSGT00390000004284.f #13 ENSGT00390000012248 #11 ENSGT00390000010591 #10 ENSGT00940000170452 ENSGT00390000007046.a ENSGT00940000162838.g.a ENSGT00390000009477.t ENSGT00390000014687 ENSGT00390000004881 ENSGT01030000235154 ENSGT00940000156327.k #18 ENSGT00940000156841.a.b #19 ENSGT00940000154958 #22 ENSGT00940000154186.a.r #27 ENSGT00390000001858 #26 ENSGT00940000177082 ENSGT00940000155129.B ENSGT00950000183209.b.a.b ENSGT00390000003866.a.a.f ENSGT00940000156258.f.b ENSGT00940000157923 ENSGT00390000008808.q ENSGT00950000182886.b.a.b ENSGT00940000157084.e.a ENSGT00520000059926 ENSGT00390000001146 ENSGT00390000000549 ENSGT00390000009679 Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00940000154864.a.a ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000157084.e.a ENSGT00950000182886.b.a.b ENSGT00390000008808.q ENSGT00940000157923 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.b ENSGT00940000155129.B ENSGT00940000177082 ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000154958 #22 ENSGT00940000156841.a.b #19 ENSGT00940000156327.k #18 ENSGT01030000235154 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 #10 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.b ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.a Nile tilapia MODERN SPECIES 18 kat14 (ENSONIG00000006853) PET117 (ENSONIG00000032533) TMEM63B (ENSONIG00000006847) ENSONIG00000027885 srd5a2a (ENSONIG00000006846) psen2 (ENSONIG00000006843) ENSONIG00000036137 ENSONIG00000030673 ENSONIG00000029466 ENSONIG00000042207 tmem264 (ENSONIG00000040666) ENSONIG00000006839 slc8a1a (ENSONIG00000006825) ENSONIG00000006824 ENSONIG00000036196 ENSONIG00000006819 #22 SPRED2 (ENSONIG00000006818) #19 ENSONIG00000006807 #18 ENSONIG00000030664 #17 ENSONIG00000041558 ENSONIG00000027227 esf1 (ENSONIG00000006804) ndufaf5 (ENSONIG00000006801) GAS8 (ENSONIG00000006797) KIF16B (ENSONIG00000006792) snrpb2 (ENSONIG00000006786) prokr1a (ENSONIG00000006785) ENSONIG00000032591 #10 fbxo48 (ENSONIG00000006782) #11 cnrip1a (ENSONIG00000042949) #13 ENSONIG00000040210 Pseudocrenilabrinae_A ANCESTRAL SPECIES 43 ENSGT00940000154864.a.a ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000157084.e.a ENSGT00950000182886.b.a.b ENSGT00390000008808.q ENSGT00940000157923 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.b ENSGT00940000155129.B ENSGT00940000177082 ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000154958 #22 ENSGT00940000156841.a.b #19 ENSGT00940000156327.k #18 ENSGT00390000009597.d #17 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.b ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.a ENSGT01030000234626.C Haplochromini ANCESTRAL SPECIES 49 ENSGT00940000154864.a.a ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000157084.e.a ENSGT00950000182886.b.a.b ENSGT00390000008808.q ENSGT00940000157923 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.b ENSGT00940000155129.B ENSGT00940000177082 ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000154958 #22 ENSGT00940000182088 ENSGT00940000156841.a.b #19 ENSGT00940000156327.k #18 ENSGT00390000009597.d #17 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.b ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.a Burton s mouthbrooder MODERN SPECIES 560 tmem264 (ENSHBUG00000001758) ENSHBUG00000001764 ENSHBUG00000001768 ENSHBUG00000001773 ENSHBUG00000001782 aftpha (ENSHBUG00000001791) #27 ENSHBUG00000001802 #22 ENSHBUG00000001812 SPRED2 (ENSHBUG00000001816) #19 ENSHBUG00000001866 #18 ENSHBUG00000001880 esf1 (ENSHBUG00000001890) ndufaf5 (ENSHBUG00000001909) gas8 (ENSHBUG00000001919) ENSHBUG00000001940 snrpb2 (ENSHBUG00000001962) ENSHBUG00000001970 fbxo48 (ENSHBUG00000001975) #11 cnrip1a (ENSHBUG00000001986) #13 ENSHBUG00000001989 ENSHBUG00000002001 acaa1 (ENSHBUG00000002016) Haplochromini_A ANCESTRAL SPECIES 55 ENSGT00940000154864.a.a ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000157084.e.a ENSGT00950000182886.b.a.b ENSGT00390000008808.q ENSGT00940000157923 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.b ENSGT00940000155129.B ENSGT00940000176860.g.b.a ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000154958 #22 ENSGT00940000182088 ENSGT00940000156841.a.b #19 ENSGT00940000156327.k #18 ENSGT00390000009597.d #17 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.b ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.a Haplochromini_B ANCESTRAL SPECIES 23 ENSGT00940000155564.n ENSGT00940000154864.a.a ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000157084.e.a ENSGT00950000182886.b.a.b ENSGT00390000008808.q ENSGT00940000157923 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.b ENSGT00940000155129.B ENSGT00390000001858 #26 ENSGT00940000154186.a.r #27 ENSGT00940000154958 #22 ENSGT00940000156841.a.b #19 ENSGT00940000156327.k #18 ENSGT00390000009597.d #17 ENSGT00390000004881 ENSGT00390000014687 ENSGT00390000009477.t ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT01070000255475 ENSGT00390000012248 #11 ENSGT00390000004284.f #13 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.b.a ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.b.a.b Eastern happy MODERN SPECIES 18 SPTBN1 (ENSACLG00000003646) polr3f (ENSACLG00000003615) dzank1 (ENSACLG00000003589) kat14 (ENSACLG00000003528) TMEM63B (ENSACLG00000003492) srd5a2a (ENSACLG00000003478) dpy30 (ENSACLG00000003452) psen2 (ENSACLG00000003436) ENSACLG00000003417 tmem264 (ENSACLG00000003407) ENSACLG00000003397 slc8a1a (ENSACLG00000003376) ENSACLG00000003363 ENSACLG00000003347 #26 aftpha (ENSACLG00000003341) #27 ENSACLG00000003326 #22 SPRED2 (ENSACLG00000003307) #19 ENSACLG00000003003 #18 ENSACLG00000002989 #17 esf1 (ENSACLG00000002972) ndufaf5 (ENSACLG00000002961) gas8 (ENSACLG00000002953) KIF16B (ENSACLG00000002787) snrpb2 (ENSACLG00000002731) prokr1a (ENSACLG00000002717) ENSACLG00000002702 fbxo48 (ENSACLG00000002696) #11 cnrip1a (ENSACLG00000002666) #13 ENSACLG00000002644 ENSACLG00000002637 ENSACLG00000002568 Zebra mbuna MODERN SPECIES 1109 alg13 (ENSMZEG00005000463) ENSMZEG00005000453 ENSMZEG00005000430 opn6a (ENSMZEG00005000389) SRF (ENSMZEG00005000347) eif4a3 (ENSMZEG00005000259) soul4 (ENSMZEG00005000216) tmem178a (ENSMZEG00005000177) ENSMZEG00005000140 tmem264 (ENSMZEG00005000124) ENSMZEG00005014141 slc8a1a (ENSMZEG00005014000) ENSMZEG00005013983 ENSMZEG00005013979 #26 aftpha (ENSMZEG00005013968) #27 ENSMZEG00005013959 #22 SPRED2 (ENSMZEG00005013949) #19 ENSMZEG00005013934 #18 ENSMZEG00005013921 #17 esf1 (ENSMZEG00005013912) ENSMZEG00005013906 ndufaf5 (ENSMZEG00005013897) gas8 (ENSMZEG00005013887) KIF16B (ENSMZEG00005013858) snrpb2 (ENSMZEG00005013844) prokr1a (ENSMZEG00005013836) ENSMZEG00005013832 fbxo48 (ENSMZEG00005013823) #11 cnrip1a (ENSMZEG00005013817) #13 ENSMZEG00005013813 ENSMZEG00005013808 P. nyererei MODERN SPECIES 520 SPTBN1 (ENSPNYG00000016339) polr3f (ENSPNYG00000016276) dzank1 (ENSPNYG00000016194) kat14 (ENSPNYG00000016135) TMEM63B (ENSPNYG00000016084) srd5a2a (ENSPNYG00000016027) dpy30 (ENSPNYG00000016005) psen2 (ENSPNYG00000015979) ENSPNYG00000015944 tmem264 (ENSPNYG00000015938) ENSPNYG00000015926 slc8a1a (ENSPNYG00000015908) ENSPNYG00000015890 ENSPNYG00000015881 #26 aftpha (ENSPNYG00000015867) #27 ENSPNYG00000015841 #22 ENSPNYG00000015821 SPRED2 (ENSPNYG00000015806) #19 ENSPNYG00000015778 #18 ENSPNYG00000015755 #17 esf1 (ENSPNYG00000015735) ndufaf5 (ENSPNYG00000015685) gas8 (ENSPNYG00000015666) KIF16B (ENSPNYG00000015563) snrpb2 (ENSPNYG00000015510) prokr1a (ENSPNYG00000015482) ENSPNYG00000015475 fbxo48 (ENSPNYG00000015468) #11 cnrip1a (ENSPNYG00000015458) #13 ENSPNYG00000015452 ENSPNYG00000015440 Lyretail cichlid MODERN SPECIES 454 kat14 (ENSNBRG00000020725) PET117 (ENSNBRG00000020712) ENSNBRG00000020694 ENSNBRG00000020682 ENSNBRG00000020671 ENSNBRG00000020655 psen2 (ENSNBRG00000020606) ENSNBRG00000020592 ENSNBRG00000020572 ENSNBRG00000020562 ENSNBRG00000020554 slc8a1a (ENSNBRG00000020535) ENSNBRG00000020528 ENSNBRG00000020514 aftpha (ENSNBRG00000020506) #27 ENSNBRG00000020492 #22 SPRED2 (ENSNBRG00000020478) #19 ENSNBRG00000020371 #18 ENSNBRG00000020339 #17 esf1 (ENSNBRG00000020319) ENSNBRG00000020312 ndufaf5 (ENSNBRG00000020263) ENSNBRG00000020242 ENSNBRG00000020231 snrpb2 (ENSNBRG00000020214) prokr1a (ENSNBRG00000020199) fbxo48 (ENSNBRG00000020175) #11 cnrip1a (ENSNBRG00000020157) #13 acaa1 (ENSNBRG00000020134) btbd3a (ENSNBRG00000020120) strn (ENSNBRG00000019957) Midas cichlid MODERN SPECIES 117 ENSACIG00000018082 cnrip1a (ENSACIG00000018095) #13 fbxo48 (ENSACIG00000018104) #11 ENSACIG00000018116 prokr1a (ENSACIG00000018124) snrpb2 (ENSACIG00000018146) KIF16B (ENSACIG00000018167) GAS8 (ENSACIG00000018223) ndufaf5 (ENSACIG00000018247) esf1 (ENSACIG00000018305) ENSACIG00000018351 ENSACIG00000018359 etaa1a (ENSACIG00000018367) #17 ENSACIG00000018380 #18 SPRED2 (ENSACIG00000018400) #19 ENSACIG00000018410 #22 ENSACIG00000018423 #27 ENSACIG00000018430 ENSACIG00000018443 slc8a1a (ENSACIG00000018486) ENSACIG00000018506 ENSACIG00000018520 ENSACIG00000018555 spast (ENSACIG00000018560) ENSACIG00000018593 psen2 (ENSACIG00000018610) dpy30 (ENSACIG00000018634) snai2 (ENSACIG00000018641) SNTG1 (ENSACIG00000018689) pcmtd1 (ENSACIG00000018704) ST18 (ENSACIG00000018723) Cod MODERN SPECIES 16 ENSGMOG00000033786 ENSGMOG00000029208 ENSGMOG00000029633 ENSGMOG00000030811 ENSGMOG00000033424 ENSGMOG00000004358 ENSGMOG00000032206 ENSGMOG00000000793 ENSGMOG00000000805 ENSGMOG00000031157 ENSGMOG00000030417 ENSGMOG00000000841 #17 meis1a (ENSGMOG00000014286) #18 SPRED2 (ENSGMOG00000033943) #19 actr2a (ENSGMOG00000010030) #21 RAB1A (ENSGMOG00000010022) #22 ENSGMOG00000025646 #25 AFTPH (ENSGMOG00000030916) #27 ENSGMOG00000032402 LGALSL (ENSGMOG00000009968) #28 ENSGMOG00000025534 ENSGMOG00000012791 ENSGMOG00000037064 ##29 VPS54 (ENSGMOG00000003472) #30 ugp2a (ENSGMOG00000003445) #31 MDH1 (ENSGMOG00000003426) #34 otx2a (ENSGMOG00000032864) ENSGMOG00000031691 ENSGMOG00000035226 ENSGMOG00000014680 ENSGMOG00000025136