Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Glires	ANCESTRAL SPECIES	13	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Lagomorpha	ANCESTRAL SPECIES	10	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556.lb.a #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00390000012029
Rabbit	MODERN SPECIES	11	ARHGAP25 (ENSOCUG00000010212) #7	PROKR1 (ENSOCUG00000026978) #8	APLF (ENSOCUG00000006121) #9	FBXO48 (ENSOCUG00000006116) #10	PLEK (ENSOCUG00000006113) #11	CNRIP1 (ENSOCUG00000006109) #12	PPP3R1 (ENSOCUG00000027562) #13	ENSOCUG00000006100 #14	DNAAF10 (ENSOCUG00000006087) #15	ENSOCUG00000009771 #16	ETAA1 (ENSOCUG00000001812) #17	MEIS1 (ENSOCUG00000001842) #18	ENSOCUG00000034052 #19	SPRED2 (ENSOCUG00000004913) #20	ACTR2 (ENSOCUG00000004906) #21	RAB1A (ENSOCUG00000017003) #22	CEP68 (ENSOCUG00000016996) #23	ENSOCUG00000010821 #24	SERTAD2 (ENSOCUG00000008192) #25	AFTPH (ENSOCUG00000006390) #26	LGALSL (ENSOCUG00000013957) #27	ENSOCUG00000031191 #28	PELI1 (ENSOCUG00000027961) #29	VPS54 (ENSOCUG00000002143) #30	ENSOCUG00000002137 #31	MDH1 (ENSOCUG00000006166) #32	WDPCP (ENSOCUG00000006156) #33	OTX1 (ENSOCUG00000021773) #34	EHBP1 (ENSOCUG00000013563) #35	ENSOCUG00000037865 #36	TMEM17 (ENSOCUG00000010487) #37
Pika	MODERN SPECIES	3798																RAB1A (ENSOPRG00000006595) #22	CEP68 (ENSOPRG00000006588) #23	SLC1A4 (ENSOPRG00000006584) #24
Rodentia	ANCESTRAL SPECIES	15	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A.f #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Naked mole-rat female	MODERN SPECIES	23	PLEK (ENSHGLG00000019154) #11	CNRIP1 (ENSHGLG00000045252) #12	ENSHGLG00000047583	PPP3R1 (ENSHGLG00000044041) #13	PNO1 (ENSHGLG00000045522) #14	DNAAF10 (ENSHGLG00000012153) #15	ENSHGLG00000012332 #16	ETAA1 (ENSHGLG00000040625) #17	ENSHGLG00000020742	MEIS1 (ENSHGLG00000012586) #18	ENSHGLG00000013407	ENSHGLG00000041829	ENSHGLG00000034618	ENSHGLG00000042711 #20	ENSHGLG00000037092	RAB1A (ENSHGLG00000045077) #22	CEP68 (ENSHGLG00000018361) #23	ENSHGLG00000048375 #23	SLC1A4 (ENSHGLG00000036619) #24	ENSHGLG00000049432	ENSHGLG00000047996 #25	ENSHGLG00000004348	ENSHGLG00000004286 #26	ENSHGLG00000035846 #27	PELI1 (ENSHGLG00000033688) #29	ENSHGLG00000033380	VPS54 (ENSHGLG00000004813) #30	UGP2 (ENSHGLG00000005211) #31	MDH1 (ENSHGLG00000033109) #32	ENSHGLG00000034790	WDPCP (ENSHGLG00000005902) #33
Hystricomorpha_a	ANCESTRAL SPECIES	35	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A.f #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Hystricomorpha_b	DUPLICATION
Hystricomorpha_b	ANCESTRAL SPECIES	33	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958.y #22	ENSGT00810000125473.A.f #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Long-tailed chinchilla	MODERN SPECIES	131	BMP10 (ENSCLAG00000007285)	ARHGAP25 (ENSCLAG00000007583) #7	PROKR1 (ENSCLAG00000008825) #8	APLF (ENSCLAG00000009519) #9	FBXO48 (ENSCLAG00000010201) #10	PLEK (ENSCLAG00000010835) #11	CNRIP1 (ENSCLAG00000012035) #12	PPP3R1 (ENSCLAG00000012159) #13	PNO1 (ENSCLAG00000015058) #14	DNAAF10 (ENSCLAG00000014702) #15	C1D (ENSCLAG00000011883) #16	ETAA1 (ENSCLAG00000013575) #17	MEIS1 (ENSCLAG00000010420) #18	SPRED2 (ENSCLAG00000011449) #20	ACTR2 (ENSCLAG00000010920) #21	RAB1A (ENSCLAG00000014766) #22	CEP68 (ENSCLAG00000012193) #23	SLC1A4 (ENSCLAG00000008207) #24	SERTAD2 (ENSCLAG00000008318) #25	AFTPH (ENSCLAG00000012032) #26	ENSCLAG00000012344	LGALSL (ENSCLAG00000015114) #27	PELI1 (ENSCLAG00000006481) #29	VPS54 (ENSCLAG00000007366) #30	UGP2 (ENSCLAG00000010416) #31	MDH1 (ENSCLAG00000007815) #32	ENSCLAG00000008400 #33	OTX1 (ENSCLAG00000010265) #34	EHBP1 (ENSCLAG00000007561) #35	TMEM17 (ENSCLAG00000013487) #37	B3GNT2 (ENSCLAG00000013147)
Degu	MODERN SPECIES	119	BMP10 (ENSODEG00000010621)	ARHGAP25 (ENSODEG00000012290) #7	PROKR1 (ENSODEG00000011030) #8	FBXO48 (ENSODEG00000011400) #10	PLEK (ENSODEG00000011044) #11	CNRIP1 (ENSODEG00000011175) #12	PPP3R1 (ENSODEG00000012397) #13	PNO1 (ENSODEG00000011769) #14	ENSODEG00000011043 #15	ENSODEG00000019812	ENSODEG00000011242 #16	MEIS1 (ENSODEG00000012314) #18	ENSODEG00000012312	SPRED2 (ENSODEG00000012243) #20	ENSODEG00000010956 #21	ENSODEG00000011248 #22	SLC1A4 (ENSODEG00000011406) #24	SERTAD2 (ENSODEG00000011523) #25	ENSODEG00000011805 #26	LGALSL (ENSODEG00000011485) #27	ENSODEG00000011901	PELI1 (ENSODEG00000011189) #29	VPS54 (ENSODEG00000012541) #30	ENSODEG00000011552 #31	ENSODEG00000012736	MDH1 (ENSODEG00000011582) #32	WDPCP (ENSODEG00000011330) #33	ENSODEG00000019821	ENSODEG00000011103	ENSODEG00000011160	OTX1 (ENSODEG00000012071) #34
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00940000154958.z #22
Degu	MODERN SPECIES	68	ENSODEG00000012690	PRSS58 (ENSODEG00000013832)	ENSODEG00000013684	ENSODEG00000012923	ENSODEG00000012554	ENSODEG00000013222	ENSODEG00000014167	ENSODEG00000012766	TRPV6 (ENSODEG00000015340)	EPHB6 (ENSODEG00000012570)	TRPV5 (ENSODEG00000014153)	ENSODEG00000014532	KEL (ENSODEG00000014311)	ENSODEG00000012786	ENSODEG00000013095	ENSODEG00000014420 #22	ENSODEG00000014142	GSTK1 (ENSODEG00000013235)	CASP2 (ENSODEG00000012945)	CLCN1 (ENSODEG00000013200)	FAM131B (ENSODEG00000013311)	ZYX (ENSODEG00000013085)	EPHA1 (ENSODEG00000013070)	ENSODEG00000012320	ENSODEG00000012803	ENSODEG00000020018	ENSODEG00000012681	ENSODEG00000012159	ENSODEG00000012316	TCAF1 (ENSODEG00000012182)	ENSODEG00000013843
Guinea pig	MODERN SPECIES	48														SPRED2 (ENSCPOG00000037272) #20	ACTR2 (ENSCPOG00000025808) #21	RAB1A (ENSCPOG00000015437) #22	CEP68 (ENSCPOG00000001592) #23	SLC1A4 (ENSCPOG00000008754) #24	ENSCPOG00000033401 #26	LGALSL (ENSCPOG00000039657) #27	PELI1 (ENSCPOG00000037199) #29	VPS54 (ENSCPOG00000037738) #30	UGP2 (ENSCPOG00000008459) #31	MDH1 (ENSCPOG00000010755) #32	ENSCPOG00000036317 #33	ENSCPOG00000030520 #33	OTX1 (ENSCPOG00000004881) #34	EHBP1 (ENSCPOG00000002001) #35	TMEM17 (ENSCPOG00000035038) #37	B3GNT2 (ENSCPOG00000034379)	COMMD1 (ENSCPOG00000002088)
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000154544.a #8	ENSGT00940000164891	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	5	PROKR1 (ENSSVLG00005021730) #8	ENSSVLG00005021708	APLF (ENSSVLG00005021663) #9	FBXO48 (ENSSVLG00005021637) #10	PLEK (ENSSVLG00005021563) #11	CNRIP1 (ENSSVLG00005021502) #12	PPP3R1 (ENSSVLG00005021432) #13	PNO1 (ENSSVLG00005021413) #14	DNAAF10 (ENSSVLG00005021285) #15	C1D (ENSSVLG00005021246) #16	ETAA1 (ENSSVLG00005021110) #17	MEIS1 (ENSSVLG00005020894) #18	ENSSVLG00005020854	SPRED2 (ENSSVLG00005020765) #20	ACTR2 (ENSSVLG00005020565) #21	ENSSVLG00005020476 #22	CEP68 (ENSSVLG00005020379) #23	SOWAHC (ENSSVLG00005020212)	SEPTIN10 (ENSSVLG00005020034)	SH3RF3 (ENSSVLG00005019900)	EDAR (ENSSVLG00005019677)	CCDC138 (ENSSVLG00005019503)	RANBP2 (ENSSVLG00005018522)	ENSSVLG00005018289	ENSSVLG00005018042	UXS1 (ENSSVLG00005017952)	ENSSVLG00005017929	ENSSVLG00005017910	ST6GAL2 (ENSSVLG00005017851)	ENSSVLG00005017814	SLC5A7 (ENSSVLG00005017705)
Eurasian red squirrel	MODERN SPECIES	17	ENSSVLG00005015610	ENSSVLG00005015597	ENSSVLG00005015508	ENSSVLG00005015482	ENSSVLG00005015454	ENSSVLG00005015394	ENSSVLG00005015368	ENSSVLG00005015244	YWHAH (ENSSVLG00005015202)	SLC5A1 (ENSSVLG00005014942)	ENSSVLG00005014768	ENSSVLG00005014557	ENSSVLG00005014505	DEPDC5 (ENSSVLG00005014165)	PRR14L (ENSSVLG00005013651)	ENSSVLG00005013578 #22	PISD (ENSSVLG00005013477)	ENSSVLG00005013121	ENSSVLG00005013045	SFI1 (ENSSVLG00005011756)	ENSSVLG00005010969	ENSSVLG00005010889	DRG1 (ENSSVLG00005010798)	PATZ1 (ENSSVLG00005010670)	PIK3IP1 (ENSSVLG00005010612)	LIMK2 (ENSSVLG00005010456)	RNF185 (ENSSVLG00005010368)	PLA2G3 (ENSSVLG00005010180)	INPP5J (ENSSVLG00005009829)	SELENOM (ENSSVLG00005009730)	SMTN (ENSSVLG00005009610)
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000164891	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000154431.e.a.f	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Alpin marmot	MODERN SPECIES	6	CNRIP1 (ENSMMMG00000005618) #12	ENSMMMG00000005630	PPP3R1 (ENSMMMG00000005651) #13	PNO1 (ENSMMMG00000005661) #14	DNAAF10 (ENSMMMG00000005668) #15	C1D (ENSMMMG00000005685) #16	ETAA1 (ENSMMMG00000005704) #17	ENSMMMG00000005754	ENSMMMG00000005757	MEIS1 (ENSMMMG00000005763) #18	ENSMMMG00000005870	ENSMMMG00000005873	SPRED2 (ENSMMMG00000005882) #20	ENSMMMG00000005906	ACTR2 (ENSMMMG00000005910) #21	RAB1A (ENSMMMG00000005929) #22	CEP68 (ENSMMMG00000005980) #23	SLC1A4 (ENSMMMG00000006026) #24	ENSMMMG00000006042	ENSMMMG00000006048	AFTPH (ENSMMMG00000006097) #26	LGALSL (ENSMMMG00000006152) #27	PELI1 (ENSMMMG00000006175) #29	VPS54 (ENSMMMG00000006188) #30	UGP2 (ENSMMMG00000006263) #31	ENSMMMG00000006286	MDH1 (ENSMMMG00000006303) #32	WDPCP (ENSMMMG00000006330) #33	OTX1 (ENSMMMG00000006353) #34	EHBP1 (ENSMMMG00000006363) #35	TMEM17 (ENSMMMG00000006473) #37
Marmotini_b	ANCESTRAL SPECIES	44	ENSGT00940000164891	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000154431.e.a.f	ENSGT00940000156841 #20	ENSGT00960000190724	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Arctic ground squirrel	MODERN SPECIES	47	FBXO48 (ENSUPAG00010010632) #10	PLEK (ENSUPAG00010010638) #11	CNRIP1 (ENSUPAG00010010645) #12	PPP3R1 (ENSUPAG00010010653) #13	PNO1 (ENSUPAG00010010658) #14	DNAAF10 (ENSUPAG00010010668) #15	ENSUPAG00010010674 #16	ETAA1 (ENSUPAG00010010688) #17	ENSUPAG00010010694	MEIS1 (ENSUPAG00010010695) #18	ENSUPAG00010010713	ENSUPAG00010010722	SPRED2 (ENSUPAG00010010724) #20	ENSUPAG00010010742	ACTR2 (ENSUPAG00010010750) #21	RAB1A (ENSUPAG00010010773) #22	CEP68 (ENSUPAG00010010822) #23	SLC1A4 (ENSUPAG00010010829) #24	ENSUPAG00010010837	SERTAD2 (ENSUPAG00010010839) #25	AFTPH (ENSUPAG00010010843) #26	LGALSL (ENSUPAG00010010929) #27	PELI1 (ENSUPAG00010010945) #29	VPS54 (ENSUPAG00010010962) #30	UGP2 (ENSUPAG00010011000) #31	MDH1 (ENSUPAG00010011052) #32	WDPCP (ENSUPAG00010011061) #33	OTX1 (ENSUPAG00010011094) #34	EHBP1 (ENSUPAG00010011097) #35	TMEM17 (ENSUPAG00010011243) #37	B3GNT2 (ENSUPAG00010011255)
Squirrel	DUPLICATION
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	91	ARHGAP25 (ENSSTOG00000010347) #7	ENSSTOG00000010343	APLF (ENSSTOG00000014677) #9	FBXO48 (ENSSTOG00000014675) #10	PLEK (ENSSTOG00000014667) #11	CNRIP1 (ENSSTOG00000004875) #12	PPP3R1 (ENSSTOG00000025985) #13	PNO1 (ENSSTOG00000026989) #14	DNAAF10 (ENSSTOG00000024192) #15	C1D (ENSSTOG00000012346) #16	ETAA1 (ENSSTOG00000027144) #17	MEIS1 (ENSSTOG00000009914) #18	ENSSTOG00000024155	SPRED2 (ENSSTOG00000022318) #20	ACTR2 (ENSSTOG00000012608) #21	ENSSTOG00000020693 #22	CEP68 (ENSSTOG00000011479) #23	SLC1A4 (ENSSTOG00000025160) #24	SERTAD2 (ENSSTOG00000008454) #25	ENSSTOG00000030042	AFTPH (ENSSTOG00000020828) #26	LGALSL (ENSSTOG00000024204) #27	PELI1 (ENSSTOG00000026315) #29	VPS54 (ENSSTOG00000023517) #30	UGP2 (ENSSTOG00000000789) #31	ENSSTOG00000023912	MDH1 (ENSSTOG00000014227) #32	WDPCP (ENSSTOG00000014213) #33	OTX1 (ENSSTOG00000025219) #34	EHBP1 (ENSSTOG00000020225) #35	TMEM17 (ENSSTOG00000009462) #37
Squirrel	MODERN SPECIES	419			ENSSTOG00000030531	USP51 (ENSSTOG00000016321)	ENSSTOG00000028849	FOXR2 (ENSSTOG00000014071)	ENSSTOG00000019963	RRAGB (ENSSTOG00000004660)	ENSSTOG00000031660	KLF8 (ENSSTOG00000012012)	UBQLN2 (ENSSTOG00000014053)	ENSSTOG00000024953	NBDY (ENSSTOG00000033489)	ENSSTOG00000030343	ENSSTOG00000020423	ENSSTOG00000033408 #22	ENSSTOG00000025630	ENSSTOG00000019559	ENSSTOG00000026134
Squirrel	MODERN SPECIES	325										ZNF148 (ENSSTOG00000027082)	SLC12A8 (ENSSTOG00000028300)	HEG1 (ENSSTOG00000019628)	ITGB5 (ENSSTOG00000007965)	UMPS (ENSSTOG00000005682)	KALRN (ENSSTOG00000005605)	ENSSTOG00000033153 #22	ENSSTOG00000004225	CCDC14 (ENSSTOG00000004201)	MYLK (ENSSTOG00000000046)	HACD2 (ENSSTOG00000023651)	ADCY5 (ENSSTOG00000000043)	SEC22A (ENSSTOG00000000042)	PDIA5 (ENSSTOG00000000040)	SEMA5B (ENSSTOG00000010313)
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	382	Gkn3 (ENSDORG00000029528)	Bmp10 (ENSDORG00000012857)	Arhgap25 (ENSDORG00000012856) #7	ENSDORG00000012853 #8	Aplf (ENSDORG00000011241) #9	Fbxo48 (ENSDORG00000011239) #10	Plek (ENSDORG00000029923) #11	Cnrip1 (ENSDORG00000025749) #12	Ppp3r1 (ENSDORG00000024931) #13	ENSDORG00000006867 #14	Dnaaf10 (ENSDORG00000006862) #15	C1d (ENSDORG00000003300) #16	Meis1 (ENSDORG00000008334) #18	Spred2 (ENSDORG00000012174) #20	Actr2 (ENSDORG00000001487) #21	ENSDORG00000028628 #22	Cep68 (ENSDORG00000002111) #23	Slc1a4 (ENSDORG00000002394) #24	Sertad2 (ENSDORG00000025954) #25	ENSDORG00000027058	ENSDORG00000004159 #26	ENSDORG00000027919 #27	Peli1 (ENSDORG00000025404) #29	Vps54 (ENSDORG00000009782) #30	Ugp2 (ENSDORG00000013164) #31	Rasl2-9 (ENSDORG00000027038)	Mdh1 (ENSDORG00000000099) #32	ENSDORG00000009021	Wdpcp (ENSDORG00000003329) #33	Otx1 (ENSDORG00000024553) #34	ENSDORG00000023858
Kangaroo rat	MODERN SPECIES	338	Trpv1 (ENSDORG00000009857)	Shpk (ENSDORG00000013798)	Ctns (ENSDORG00000013799)	ENSDORG00000013801	Emc6 (ENSDORG00000013802)	ENSDORG00000013803	Ncbp3 (ENSDORG00000010141)	Camkk1 (ENSDORG00000002757)	P2rx1 (ENSDORG00000002759)	Atp2a3 (ENSDORG00000010345)	ENSDORG00000027978	Zzef1 (ENSDORG00000013546)	Ankfy1 (ENSDORG00000001111)	Ube2g1 (ENSDORG00000027019)	Spns2 (ENSDORG00000000440)	ENSDORG00000002112 #22	Smtnl2 (ENSDORG00000010818)	Fbxo39 (ENSDORG00000015547)	Med31 (ENSDORG00000012204)	Txndc17 (ENSDORG00000025800)	ENSDORG00000012202	Pitpnm3 (ENSDORG00000007558)	Aipl1 (ENSDORG00000029045)	Wscd1 (ENSDORG00000010220)	Derl2 (ENSDORG00000026480)	Dhx33 (ENSDORG00000014344)	ENSDORG00000029038	Rpain (ENSDORG00000007467)	Nup88 (ENSDORG00000007462)	Rabep1 (ENSDORG00000007460)	Scimp (ENSDORG00000028534)
Myomorpha	ANCESTRAL SPECIES	24					ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Lesser Egyptian jerboa	MODERN SPECIES	74	Iah1 (ENSJJAG00000015466)	Adam17 (ENSJJAG00000020057)	Ywhaq (ENSJJAG00000008194)	ENSJJAG00000011210 #10	Plek (ENSJJAG00000005757) #11	Cnrip1 (ENSJJAG00000016204) #12	Ppp3r1 (ENSJJAG00000016869) #13	Pno1 (ENSJJAG00000022862) #14	Dnaaf10 (ENSJJAG00000019935) #15	ENSJJAG00000023186 #16	ENSJJAG00000021064	ENSJJAG00000011226 #17	Meis1 (ENSJJAG00000015459) #18	Spred2 (ENSJJAG00000020977) #20	Actr2 (ENSJJAG00000008642) #21	Rab1a (ENSJJAG00000014396) #22	Cep68 (ENSJJAG00000016421) #23	Slc1a4 (ENSJJAG00000002418) #24	Sertad2 (ENSJJAG00000015989) #25	ENSJJAG00000020384 #26	Gm5065 (ENSJJAG00000016772) #27	Peli1 (ENSJJAG00000000296) #29	Vps54 (ENSJJAG00000012401) #30	Ugp2 (ENSJJAG00000014432) #31	Mdh1 (ENSJJAG00000024369) #32	ENSJJAG00000014833 #33	ENSJJAG00000015148 #33	Otx1 (ENSJJAG00000011287) #34	Ehbp1 (ENSJJAG00000023917) #35	Tmem17 (ENSJJAG00000007029) #37	B3gnt2 (ENSJJAG00000007561)
Muroidea	ANCESTRAL SPECIES	21					ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Upper Galilee mountains blind mole rat	MODERN SPECIES	1542																Rab1a (ENSNGAG00000005838) #22	Cep68 (ENSNGAG00000024137) #23	Slc1a4 (ENSNGAG00000022015) #24	Sertad2 (ENSNGAG00000019290) #25	ENSNGAG00000010686	Aftph (ENSNGAG00000022259) #26	ENSNGAG00000017298 #27	Peli1 (ENSNGAG00000014256) #29	Vps54 (ENSNGAG00000019724) #30	Ugp2 (ENSNGAG00000014716) #31	Mdh1 (ENSNGAG00000022959) #32	ENSNGAG00000016412	Wdpcp (ENSNGAG00000022039) #33	Otx1 (ENSNGAG00000023167) #34	Ehbp1 (ENSNGAG00000022543) #35
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Murinae	ANCESTRAL SPECIES	12	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.s #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00950000183152.A
Mus	ANCESTRAL SPECIES	14	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.s #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00950000183152.A
Mus_A	ANCESTRAL SPECIES	2	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319.cb	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.s #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00950000183152.A
Mus_B	ANCESTRAL SPECIES	2	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319.cb	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.s #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00950000183152.A
Mus_C	ANCESTRAL SPECIES	3	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319.cb	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.s #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00950000183152.A
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0016943	Sec61g (MGP_SPRETEiJ_G0016944)	Egfr (MGP_SPRETEiJ_G0016945)	Fbxo48 (MGP_SPRETEiJ_G0016946) #10	Plek (MGP_SPRETEiJ_G0016947) #11	MGP_SPRETEiJ_G0016948 #12	Ppp3r1 (MGP_SPRETEiJ_G0016949) #13	Dnaaf10 (MGP_SPRETEiJ_G0016950) #15	Pno1 (MGP_SPRETEiJ_G0016951) #14	C1d (MGP_SPRETEiJ_G0016952) #16	Etaa1 (MGP_SPRETEiJ_G0016953) #17	Meis1 (MGP_SPRETEiJ_G0016954) #18	Asb12 (MGP_SPRETEiJ_G0016955)	Spred2 (MGP_SPRETEiJ_G0016956) #20	Actr2 (MGP_SPRETEiJ_G0016957) #21	Rab1a (MGP_SPRETEiJ_G0016958) #22	Cep68 (MGP_SPRETEiJ_G0016959) #23	Slc1a4 (MGP_SPRETEiJ_G0016960) #24	Sertad2 (MGP_SPRETEiJ_G0016961) #25	Aftph (MGP_SPRETEiJ_G0016962) #26	Lgalsl (MGP_SPRETEiJ_G0016963) #27	Peli1 (MGP_SPRETEiJ_G0016964) #29	Vps54 (MGP_SPRETEiJ_G0016965) #30	Ugp2 (MGP_SPRETEiJ_G0016966) #31	Mdh1 (MGP_SPRETEiJ_G0016967) #32	Wdpcp (MGP_SPRETEiJ_G0016968) #33	Otx1 (MGP_SPRETEiJ_G0016969) #34	Ehbp1 (MGP_SPRETEiJ_G0016970) #35	Tmem17 (MGP_SPRETEiJ_G0016971) #37	MGP_SPRETEiJ_G0016972	B3gnt2 (MGP_SPRETEiJ_G0016973)
Steppe mouse	MODERN SPECIES	3178											Meis1 (ENSMSIG00000012755) #18	ENSMSIG00000013123	ENSMSIG00000013132	Spred2 (ENSMSIG00000013142) #20	Actr2 (ENSMSIG00000013218) #21	Rab1a (ENSMSIG00000013288) #22	Cep68 (ENSMSIG00000013342) #23	Slc1a4 (ENSMSIG00000013384) #24	ENSMSIG00000013417	Sertad2 (ENSMSIG00000013434) #25	Aftph (ENSMSIG00000013440) #26	ENSMSIG00000013501
Mouse	MODERN SPECIES	2	Pom121l12 (ENSMUSG00000084135)	Vstm2a (ENSMUSG00000048834)	Sec61g (ENSMUSG00000078974)	Egfr (ENSMUSG00000020122)	Fbxo48 (ENSMUSG00000044966) #10	Plek (ENSMUSG00000020120) #11	Cnrip1 (ENSMUSG00000044629) #12	Ppp3r1 (ENSMUSG00000033953) #13	Dnaaf10 (ENSMUSG00000078970) #15	Pno1 (ENSMUSG00000020116) #14	C1d (ENSMUSG00000000581) #16	Etaa1 (ENSMUSG00000016984) #17	Meis1 (ENSMUSG00000020160) #18	Spred2 (ENSMUSG00000045671) #20	Actr2 (ENSMUSG00000020152) #21	Rab1a (ENSMUSG00000020149) #22	Cep68 (ENSMUSG00000044066) #23	Slc1a4 (ENSMUSG00000020142) #24	Sertad2 (ENSMUSG00000049800) #25	Aftph (ENSMUSG00000049659) #26	Lgalsl (ENSMUSG00000042363) #27	Peli1 (ENSMUSG00000020134) #29	Vps54 (ENSMUSG00000020128) #30	Ugp2 (ENSMUSG00000001891) #31	Mdh1 (ENSMUSG00000020321) #32	Wdpcp (ENSMUSG00000020319) #33	Otx1 (ENSMUSG00000005917) #34	Ehbp1 (ENSMUSG00000042302) #35	Tmem17 (ENSMUSG00000049904) #37	B3gnt2 (ENSMUSG00000051650)	Commd1b (ENSMUSG00000098650)
Ryukyu mouse	MODERN SPECIES	2	Cobl (MGP_CAROLIEiJ_G0016100)	MGP_CAROLIEiJ_G0016101	Sec61g (MGP_CAROLIEiJ_G0016102)	Egfr (MGP_CAROLIEiJ_G0016103)	Fbxo48 (MGP_CAROLIEiJ_G0016104) #10	Plek (MGP_CAROLIEiJ_G0016105) #11	Cnrip1 (MGP_CAROLIEiJ_G0016106) #12	Ppp3r1 (MGP_CAROLIEiJ_G0016107) #13	Dnaaf10 (MGP_CAROLIEiJ_G0016108) #15	Pno1 (MGP_CAROLIEiJ_G0016109) #14	C1d (MGP_CAROLIEiJ_G0016110) #16	Etaa1 (MGP_CAROLIEiJ_G0016111) #17	Meis1 (MGP_CAROLIEiJ_G0016112) #18	Spred2 (MGP_CAROLIEiJ_G0016113) #20	Actr2 (MGP_CAROLIEiJ_G0016114) #21	Rab1a (MGP_CAROLIEiJ_G0016115) #22	Cep68 (MGP_CAROLIEiJ_G0016116) #23	Slc1a4 (MGP_CAROLIEiJ_G0016117) #24	Sertad2 (MGP_CAROLIEiJ_G0016118) #25	Aftph (MGP_CAROLIEiJ_G0016119) #26	Gm5065 (MGP_CAROLIEiJ_G0016120) #27	Peli1 (MGP_CAROLIEiJ_G0016121) #29	Vps54 (MGP_CAROLIEiJ_G0016122) #30	Ugp2 (MGP_CAROLIEiJ_G0016123) #31	Mdh1 (MGP_CAROLIEiJ_G0016124) #32	Wdpcp (MGP_CAROLIEiJ_G0016125) #33	Otx1 (MGP_CAROLIEiJ_G0016126) #34	Ehbp1 (MGP_CAROLIEiJ_G0016127) #35	Tmem17 (MGP_CAROLIEiJ_G0016128) #37	MGP_CAROLIEiJ_G0016129	MGP_CAROLIEiJ_G0016130
Shrew mouse	MODERN SPECIES	4	Cobl (MGP_PahariEiJ_G0016791)	MGP_PahariEiJ_G0016790	Sec61g (MGP_PahariEiJ_G0016789)	Egfr (MGP_PahariEiJ_G0016788)	Fbxo48 (MGP_PahariEiJ_G0016787) #10	Plek (MGP_PahariEiJ_G0016786) #11	MGP_PahariEiJ_G0016785 #12	Ppp3r1 (MGP_PahariEiJ_G0016784) #13	Pno1 (MGP_PahariEiJ_G0016783) #14	Dnaaf10 (MGP_PahariEiJ_G0016782) #15	C1d (MGP_PahariEiJ_G0016781) #16	Etaa1 (MGP_PahariEiJ_G0016780) #17	Meis1 (MGP_PahariEiJ_G0016779) #18	Spred2 (MGP_PahariEiJ_G0016778) #20	Actr2 (MGP_PahariEiJ_G0016777) #21	Rab1a (MGP_PahariEiJ_G0016776) #22	Cep68 (MGP_PahariEiJ_G0016775) #23	Slc1a4 (MGP_PahariEiJ_G0016774) #24	Sertad2 (MGP_PahariEiJ_G0016773) #25	Aftph (MGP_PahariEiJ_G0016772) #26	Lgalsl (MGP_PahariEiJ_G0016771) #27	MGP_PahariEiJ_G0016770 #27	Peli1 (MGP_PahariEiJ_G0016769) #29	Vps54 (MGP_PahariEiJ_G0016768) #30	Ugp2 (MGP_PahariEiJ_G0016767) #31	Mdh1 (MGP_PahariEiJ_G0016766) #32	MGP_PahariEiJ_G0016765 #33	Otx1 (MGP_PahariEiJ_G0016764) #34	Ehbp1 (MGP_PahariEiJ_G0016763) #35	Tmem17 (MGP_PahariEiJ_G0016762) #37	MGP_PahariEiJ_G0016761
Rat	DUPLICATION
Rat	DUPLICATION
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES		Cfap90 (ENSRNOG00000047406)	Fastkd3 (ENSRNOG00000027422)	Mtrr (ENSRNOG00000017826)	Zfp455l1 (ENSRNOG00000042308)	ENSRNOG00000068953	RGD1566325 (ENSRNOG00000017963)	LOC102547287 (ENSRNOG00000016462)	LOC102549842 (ENSRNOG00000049259)	Zfp748 (ENSRNOG00000069921)	Spry3-ps1 (ENSRNOG00000064505)	LOC102551340 (ENSRNOG00000047145)	Zfp273l-ps1 (ENSRNOG00000046353)	ENSRNOG00000068667	ENSRNOG00000066169	ENSRNOG00000067171 #22	ENSRNOG00000070839 #22	ENSRNOG00000068976 #22	ENSRNOG00000063413	ENSRNOG00000067926	ENSRNOG00000069813	ENSRNOG00000067477 #22	ENSRNOG00000070838 #22	AABR07001348.1 (ENSRNOG00000023081)	Ppp1r14c (ENSRNOG00000016368)	Iyd (ENSRNOG00000016286)	Plekhg1 (ENSRNOG00000016011)	Mthfd1l (ENSRNOG00000019582)	Akap12 (ENSRNOG00000019549)	Zbtb2 (ENSRNOG00000019544)	Rmnd1 (ENSRNOG00000019501)	Armt1 (ENSRNOG00000019489)
Rat	MODERN SPECIES		Adcy2 (ENSRNOG00000032150)	Cfap90 (ENSRNOG00000047406)	Fastkd3 (ENSRNOG00000027422)	Mtrr (ENSRNOG00000017826)	Zfp455l1 (ENSRNOG00000042308)	ENSRNOG00000068953	RGD1566325 (ENSRNOG00000017963)	LOC102547287 (ENSRNOG00000016462)	LOC102549842 (ENSRNOG00000049259)	Zfp748 (ENSRNOG00000069921)	Spry3-ps1 (ENSRNOG00000064505)	LOC102551340 (ENSRNOG00000047145)	Zfp273l-ps1 (ENSRNOG00000046353)	ENSRNOG00000068667	ENSRNOG00000066169	ENSRNOG00000067171 #22	ENSRNOG00000070839 #22	ENSRNOG00000068976 #22	ENSRNOG00000063413	ENSRNOG00000067926	ENSRNOG00000069813	ENSRNOG00000067477 #22	ENSRNOG00000070838 #22	AABR07001348.1 (ENSRNOG00000023081)	Ppp1r14c (ENSRNOG00000016368)	Iyd (ENSRNOG00000016286)	Plekhg1 (ENSRNOG00000016011)	Mthfd1l (ENSRNOG00000019582)	Akap12 (ENSRNOG00000019549)	Zbtb2 (ENSRNOG00000019544)	Rmnd1 (ENSRNOG00000019501)
Rat	DUPLICATION
Rat	MODERN SPECIES		Fastkd3 (ENSRNOG00000027422)	Mtrr (ENSRNOG00000017826)	Zfp455l1 (ENSRNOG00000042308)	ENSRNOG00000068953	RGD1566325 (ENSRNOG00000017963)	LOC102547287 (ENSRNOG00000016462)	LOC102549842 (ENSRNOG00000049259)	Zfp748 (ENSRNOG00000069921)	Spry3-ps1 (ENSRNOG00000064505)	LOC102551340 (ENSRNOG00000047145)	Zfp273l-ps1 (ENSRNOG00000046353)	ENSRNOG00000068667	ENSRNOG00000066169	ENSRNOG00000067171 #22	ENSRNOG00000070839 #22	ENSRNOG00000068976 #22	ENSRNOG00000063413	ENSRNOG00000067926	ENSRNOG00000069813	ENSRNOG00000067477 #22	ENSRNOG00000070838 #22	AABR07001348.1 (ENSRNOG00000023081)	Ppp1r14c (ENSRNOG00000016368)	Iyd (ENSRNOG00000016286)	Plekhg1 (ENSRNOG00000016011)	Mthfd1l (ENSRNOG00000019582)	Akap12 (ENSRNOG00000019549)	Zbtb2 (ENSRNOG00000019544)	Rmnd1 (ENSRNOG00000019501)	Armt1 (ENSRNOG00000019489)	Ccdc170 (ENSRNOG00000024280)
Rat	MODERN SPECIES		RGD1566325 (ENSRNOG00000017963)	LOC102547287 (ENSRNOG00000016462)	LOC102549842 (ENSRNOG00000049259)	Zfp748 (ENSRNOG00000069921)	Spry3-ps1 (ENSRNOG00000064505)	LOC102551340 (ENSRNOG00000047145)	Zfp273l-ps1 (ENSRNOG00000046353)	ENSRNOG00000068667	ENSRNOG00000066169	ENSRNOG00000067171 #22	ENSRNOG00000070839 #22	ENSRNOG00000068976 #22	ENSRNOG00000063413	ENSRNOG00000067926	ENSRNOG00000069813	ENSRNOG00000067477 #22	ENSRNOG00000070838 #22	AABR07001348.1 (ENSRNOG00000023081)	Ppp1r14c (ENSRNOG00000016368)	Iyd (ENSRNOG00000016286)	Plekhg1 (ENSRNOG00000016011)	Mthfd1l (ENSRNOG00000019582)	Akap12 (ENSRNOG00000019549)	Zbtb2 (ENSRNOG00000019544)	Rmnd1 (ENSRNOG00000019501)	Armt1 (ENSRNOG00000019489)	Ccdc170 (ENSRNOG00000024280)	Esr1 (ENSRNOG00000019358)	Syne1 (ENSRNOG00000018960)	Myct1 (ENSRNOG00000018858)	Vip (ENSRNOG00000018808)
Rat	MODERN SPECIES		Fbxo5 (ENSRNOG00000024077)	Vip (ENSRNOG00000018808)	Myct1 (ENSRNOG00000018858)	Syne1 (ENSRNOG00000018960)	Esr1 (ENSRNOG00000019358)	Ccdc170 (ENSRNOG00000024280)	Armt1 (ENSRNOG00000019489)	Rmnd1 (ENSRNOG00000019501)	Zbtb2 (ENSRNOG00000019544)	Akap12 (ENSRNOG00000019549)	Mthfd1l (ENSRNOG00000019582)	Plekhg1 (ENSRNOG00000016011)	Iyd (ENSRNOG00000016286)	Ppp1r14c (ENSRNOG00000016368)	AABR07001348.1 (ENSRNOG00000023081)	ENSRNOG00000070838 #22	ENSRNOG00000067477 #22	ENSRNOG00000069813	ENSRNOG00000067926	ENSRNOG00000063413	ENSRNOG00000068976 #22	ENSRNOG00000070839 #22	ENSRNOG00000067171 #22	ENSRNOG00000066169	ENSRNOG00000068667	Zfp273l-ps1 (ENSRNOG00000046353)	LOC102551340 (ENSRNOG00000047145)	Spry3-ps1 (ENSRNOG00000064505)	Zfp748 (ENSRNOG00000069921)	LOC102549842 (ENSRNOG00000049259)	LOC102547287 (ENSRNOG00000016462)
Rat	MODERN SPECIES	5	Sec61g (ENSRNOG00000005203)	Egfr (ENSRNOG00000004332)	Fbxo48 (ENSRNOG00000023026) #10	Plek (ENSRNOG00000005214) #11	Cnrip1 (ENSRNOG00000005326) #12	Pno1 (ENSRNOG00000005524) #14	C1d (ENSRNOG00000005982) #16	Hnrnpk-ps1 (ENSRNOG00000063529)	Etaa1l1 (ENSRNOG00000006185) #17	Meis1 (ENSRNOG00000004606) #18	Spred2 (ENSRNOG00000004888) #20	Actr2 (ENSRNOG00000004959) #21	AABR07016566.1 (ENSRNOG00000051648)	ENSRNOG00000070133	Rpl38 (ENSRNOG00000033686)	Rab1a (ENSRNOG00000004992) #22	Cep68 (ENSRNOG00000027282) #23	Slc1a4 (ENSRNOG00000005248) #24	Sertad2 (ENSRNOG00000005393) #25	Aftph (ENSRNOG00000005411) #26	LOC108352861 (ENSRNOG00000029052)	Lgalsl (ENSRNOG00000005464) #27	LOC108352809 (ENSRNOG00000042277)	Peli1 (ENSRNOG00000006329) #29	Vps54 (ENSRNOG00000007125) #30	Ugp2 (ENSRNOG00000008079) #31	Mdh1 (ENSRNOG00000008103) #32	Wdpcp (ENSRNOG00000054331) #33	ENSRNOG00000065408	Otx1 (ENSRNOG00000065081) #34	Ehbp1 (ENSRNOG00000008917) #35
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Cricetinae	ANCESTRAL SPECIES	37	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	121	ENSCGRG00001016899	Vstm2a (ENSCGRG00001018623)	ENSCGRG00001010828	Egfr (ENSCGRG00001020721)	Fbxo48 (ENSCGRG00001017787) #10	Plek (ENSCGRG00001023663) #11	Cnrip1 (ENSCGRG00001014944) #12	Ppp3r1 (ENSCGRG00001020769) #13	ENSCGRG00001007472 #14	ENSCGRG00001017610 #15	C1d (ENSCGRG00001023376) #16	Etaa1 (ENSCGRG00001020354) #17	Meis1 (ENSCGRG00001009447) #18	Spred2 (ENSCGRG00001015924) #20	ENSCGRG00001017243 #21	ENSCGRG00001012691 #22	Cep68 (ENSCGRG00001014327) #23	Slc1a4 (ENSCGRG00001017715) #24	ENSCGRG00001005474	Sertad2 (ENSCGRG00001009657) #25	Aftph (ENSCGRG00001016162) #26	ENSCGRG00001009126	Gm5065 (ENSCGRG00001013868) #27	Peli1 (ENSCGRG00001021958) #29	Vps54 (ENSCGRG00001009286) #30	UGP2 (ENSCGRG00001012845) #31	Mdh1 (ENSCGRG00001021102) #32	ENSCGRG00001023990	Wdpcp (ENSCGRG00001012886) #33	Otx1 (ENSCGRG00001017328) #34	Ehbp1 (ENSCGRG00001022633) #35
Chinese hamster chok1gshd	MODERN SPECIES	16	Cited1 (ENSCGRG00001022122)	Hdac8 (ENSCGRG00001022455)	Phka1 (ENSCGRG00001020129)	ENSCGRG00001024855	Dmrtc1a (ENSCGRG00001018624)	ENSCGRG00001023387	Nap1l2 (ENSCGRG00001003632)	Eif2s3y (ENSCGRG00001016219)	ENSCGRG00001015812	ENSCGRG00001007129	ENSCGRG00001012385	Cdx4 (ENSCGRG00001020397)	ENSCGRG00001012274	Chic1 (ENSCGRG00001011931)	Tsx (ENSCGRG00001005790)	ENSCGRG00001004584 #22	Zcchc13 (ENSCGRG00001009786)	ENSCGRG00001000809	Slc16a2 (ENSCGRG00001001787)	ENSCGRG00001024219	Rlim (ENSCGRG00001019959)	Nexmif (ENSCGRG00001017017)	Abcb7 (ENSCGRG00001016748)	Uprt (ENSCGRG00001001968)	Zdhhc15 (ENSCGRG00001017482)	Magee2 (ENSCGRG00001009574)	Pbdc1 (ENSCGRG00001022880)	Magee1 (ENSCGRG00001014880)	Fgf16 (ENSCGRG00001020173)	Atrx (ENSCGRG00001010011)	Magt1 (ENSCGRG00001023814)
Golden Hamster	MODERN SPECIES	639	Grik2 (ENSMAUG00000012525)	Ascc3 (ENSMAUG00000018304)	Sim1 (ENSMAUG00000021356)	Egfr (ENSMAUG00000000581)	Fbxo48 (ENSMAUG00000020533) #10	Plek (ENSMAUG00000011299) #11	Cnrip1 (ENSMAUG00000019592) #12	Ppp3r1 (ENSMAUG00000014614) #13	Pno1 (ENSMAUG00000014995) #14	Dnaaf10 (ENSMAUG00000011603) #15	C1d (ENSMAUG00000008974) #16	Etaa1 (ENSMAUG00000010594) #17	Meis1 (ENSMAUG00000001130) #18	Spred2 (ENSMAUG00000013657) #20	Actr2 (ENSMAUG00000008458) #21	Rab1a (ENSMAUG00000012156) #22	Cep68 (ENSMAUG00000014820) #23	Slc1a4 (ENSMAUG00000019775) #24	Sertad2 (ENSMAUG00000004242) #25	Aftph (ENSMAUG00000016557) #26	ENSMAUG00000015033 #27	Peli1 (ENSMAUG00000012937) #29	Vps54 (ENSMAUG00000010788) #30	ENSMAUG00000012689 #31	Mdh1 (ENSMAUG00000018086) #32	ENSMAUG00000012018	Wdpcp (ENSMAUG00000011349) #33	Otx1 (ENSMAUG00000019114) #34	Ehbp1 (ENSMAUG00000000935) #35	Tmem17 (ENSMAUG00000003448) #37	B3gnt2 (ENSMAUG00000002963)
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Northern American deer mouse	MODERN SPECIES	1	Egfr (ENSPEMG00000012745)	Fbxo48 (ENSPEMG00000023069) #10	Plek (ENSPEMG00000022796) #11	Cnrip1 (ENSPEMG00000031287) #12	Ppp3r1 (ENSPEMG00000021806) #13	Pno1 (ENSPEMG00000022989) #14	Dnaaf10 (ENSPEMG00000022118) #15	ENSPEMG00000026465 #16	Etaa1 (ENSPEMG00000011918) #17	Meis1 (ENSPEMG00000008113) #18	ENSPEMG00000012914	ENSPEMG00000028236	Spred2 (ENSPEMG00000029042) #20	Actr2 (ENSPEMG00000015727) #21	ENSPEMG00000025517	Rab1a (ENSPEMG00000009340) #22	Cep68 (ENSPEMG00000002161) #23	Slc1a4 (ENSPEMG00000018063) #24	ENSPEMG00000016241	Sertad2 (ENSPEMG00000027852) #25	Aftph (ENSPEMG00000010156) #26	ENSPEMG00000015267 #27	Peli1 (ENSPEMG00000030617) #29	Vps54 (ENSPEMG00000012405) #30	Ugp2 (ENSPEMG00000010268) #31	Mdh1 (ENSPEMG00000007456) #32	Wdpcp (ENSPEMG00000016341) #33	Otx1 (ENSPEMG00000027636) #34	Ehbp1 (ENSPEMG00000014061) #35	Tmem17 (ENSPEMG00000012666) #37	ENSPEMG00000029232
Prairie vole	MODERN SPECIES	92	Vstm2a (ENSMOCG00000004039)	ENSMOCG00000001784	ENSMOCG00000004092	Egfr (ENSMOCG00000000900)	Fbxo48 (ENSMOCG00000015915) #10	Plek (ENSMOCG00000018168) #11	Cnrip1 (ENSMOCG00000004432) #12	Ppp3r1 (ENSMOCG00000012867) #13	Pno1 (ENSMOCG00000017268) #14	Dnaaf10 (ENSMOCG00000000313) #15	C1d (ENSMOCG00000010860) #16	Etaa1 (ENSMOCG00000018537) #17	Meis1 (ENSMOCG00000016359) #18	Spred2 (ENSMOCG00000014005) #20	Actr2 (ENSMOCG00000008248) #21	Rab1a (ENSMOCG00000017022) #22	Cep68 (ENSMOCG00000003444) #23	Slc1a4 (ENSMOCG00000001173) #24	Sertad2 (ENSMOCG00000002173) #25	Aftph (ENSMOCG00000015081) #26	ENSMOCG00000003932	Gm5065 (ENSMOCG00000014300) #27	Peli1 (ENSMOCG00000016437) #29	Vps54 (ENSMOCG00000009563) #30	Ugp2 (ENSMOCG00000009715) #31	Mdh1 (ENSMOCG00000015448) #32	Wdpcp (ENSMOCG00000003579) #33	Otx1 (ENSMOCG00000014191) #34	Ehbp1 (ENSMOCG00000007287) #35	Tmem17 (ENSMOCG00000015494) #37	B3gnt2 (ENSMOCG00000000086)
Tree shrew	MODERN SPECIES	1821																ENSTBEG00000003333 #22
Primates	ANCESTRAL SPECIES	14	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00390000003682.ib.a	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5506																ENSTSYG00000029880 #22
Tarsier	MODERN SPECIES	741																RAB1A (ENSTSYG00000005996) #22
Simiiformes	DUPLICATION
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00390000003682.ib.a.a.b	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556 #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000182901.a.a.a.b.b	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Hominidae	ANCESTRAL SPECIES	19	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000182901.a.a.a.b.b	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000164467.d.b.b.b	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885.k #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s.a #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a.b #21	ENSGT00910000147214	ENSGT00940000154556.tb.a.a.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000182901.a.a.a.b.b	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00390000010721.a.a.a.b	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35
Gorilla	MODERN SPECIES	14	ENSGGOG00000041724	FBXO48 (ENSGGOG00000007346) #10	PLEK (ENSGGOG00000026840) #11	ENSGGOG00000005831 #11	CNRIP1 (ENSGGOG00000022874) #12	PPP3R1 (ENSGGOG00000039766) #13	PNO1 (ENSGGOG00000009158) #14	DNAAF10 (ENSGGOG00000010285) #15	ENSGGOG00000023297	ENSGGOG00000025982 #16	ETAA1 (ENSGGOG00000014411) #17	ENSGGOG00000005446 #18	SPRED2 (ENSGGOG00000007267) #20	ENSGGOG00000041600	ENSGGOG00000008505 #21	RAB1A (ENSGGOG00000026603) #22	CEP68 (ENSGGOG00000005826) #23	SLC1A4 (ENSGGOG00000011211) #24	AFTPH (ENSGGOG00000008449) #26	ENSGGOG00000023155	LGALSL (ENSGGOG00000006386) #27	ENSGGOG00000022216	PELI1 (ENSGGOG00000013460) #29	VPS54 (ENSGGOG00000006294) #30	UGP2 (ENSGGOG00000006283) #31	ENSGGOG00000036456	MDH1 (ENSGGOG00000007085) #32	WDPCP (ENSGGOG00000011930) #33	OTX1 (ENSGGOG00000015410) #34	EHBP1 (ENSGGOG00000034917) #35	ENSGGOG00000038261
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00940000164467.d.b.b.b	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885.k #11	ENSGT00390000004284 #12	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s.a #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a.b #21	ENSGT00910000147214	ENSGT00940000154556.tb.a.a.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00390000010721.a.a.a.b	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Pan	ANCESTRAL SPECIES	17	ENSGT00940000154544.a #8	ENSGT00940000164467.d.b.b.b	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885.k #11	ENSGT00390000004284 #12	ENSGT00950000183091.A.b #15	ENSGT00390000018052.l #14	ENSGT00390000015405.s.b #16	ENSGT00390000015405.s.a #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556.tb.a.a.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00390000010721.a.a.a.b	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Bonobo	MODERN SPECIES	14	ARHGAP25 (ENSPPAG00000035053) #7	PROKR1 (ENSPPAG00000042374) #8	ENSPPAG00000036471	APLF (ENSPPAG00000033703) #9	FBXO48 (ENSPPAG00000030285) #10	PLEK (ENSPPAG00000036621) #11	CNRIP1 (ENSPPAG00000036249) #12	PNO1 (ENSPPAG00000039314) #14	ENSPPAG00000032606 #15	ENSPPAG00000037847 #16	ETAA1 (ENSPPAG00000034986) #17	ENSPPAG00000037169 #18	SPRED2 (ENSPPAG00000042240) #20	ENSPPAG00000026570	ENSPPAG00000030634 #21	RAB1A (ENSPPAG00000030253) #22	CEP68 (ENSPPAG00000026445) #23	SLC1A4 (ENSPPAG00000041051) #24	SERTAD2 (ENSPPAG00000033136) #25	ENSPPAG00000031785	AFTPH (ENSPPAG00000028223) #26	LGALSL (ENSPPAG00000039473) #27	PELI1 (ENSPPAG00000044117) #29	VPS54 (ENSPPAG00000028874) #30	UGP2 (ENSPPAG00000038898) #31	ENSPPAG00000032238	MDH1 (ENSPPAG00000042469) #32	WDPCP (ENSPPAG00000032819) #33	OTX1 (ENSPPAG00000028464) #34	EHBP1 (ENSPPAG00000043965) #35	TMEM17 (ENSPPAG00000011687) #37
Chimpanzee	MODERN SPECIES	14	ARHGAP25 (ENSPTRG00000012007) #7	PROKR1 (ENSPTRG00000051956) #8	ENSPTRG00000047822	APLF (ENSPTRG00000012004) #9	FBXO48 (ENSPTRG00000030457) #10	PLEK (ENSPTRG00000012003) #11	CNRIP1 (ENSPTRG00000012002) #12	PNO1 (ENSPTRG00000011999) #14	ENSPTRG00000041941 #15	C1D (ENSPTRG00000023558) #16	ETAA1 (ENSPTRG00000011996) #17	MEIS1 (ENSPTRG00000011994) #18	SPRED2 (ENSPTRG00000011992) #20	ENSPTRG00000047998	ENSPTRG00000011990 #21	RAB1A (ENSPTRG00000011989) #22	CEP68 (ENSPTRG00000011988) #23	SLC1A4 (ENSPTRG00000011985) #24	SERTAD2 (ENSPTRG00000030469) #25	ENSPTRG00000045952	AFTPH (ENSPTRG00000011983) #26	LGALSL (ENSPTRG00000047293) #27	PELI1 (ENSPTRG00000023869) #29	VPS54 (ENSPTRG00000011978) #30	UGP2 (ENSPTRG00000011976) #31	ENSPTRG00000048626	ENSPTRG00000046466	MDH1 (ENSPTRG00000011974) #32	WDPCP (ENSPTRG00000024270) #33	OTX1 (ENSPTRG00000011972) #34	EHBP1 (ENSPTRG00000011969) #35
Human	MODERN SPECIES	11	BMP10 (ENSG00000163217)	ARHGAP25 (ENSG00000163219) #7	PROKR1 (ENSG00000169618) #8	APLF (ENSG00000169621) #9	FBXO48 (ENSG00000204923) #10	PLEK (ENSG00000115956) #11	CNRIP1 (ENSG00000119865) #12	PPP3R1 (ENSG00000221823) #13	PNO1 (ENSG00000115946) #14	DNAAF10 (ENSG00000243667) #15	C1D (ENSG00000197223) #16	ETAA1 (ENSG00000143971) #17	MEIS1 (ENSG00000143995) #18	SPRED2 (ENSG00000198369) #20	ACTR2 (ENSG00000138071) #21	RAB1A (ENSG00000138069) #22	CEP68 (ENSG00000011523) #23	SLC1A4 (ENSG00000115902) #24	SERTAD2 (ENSG00000179833) #25	AFTPH (ENSG00000119844) #26	LGALSL (ENSG00000119862) #27	PELI1 (ENSG00000197329) #29	VPS54 (ENSG00000143952) #30	UGP2 (ENSG00000169764) #31	MDH1 (ENSG00000014641) #32	WDPCP (ENSG00000143951) #33	OTX1 (ENSG00000115507) #34	EHBP1 (ENSG00000115504) #35	TMEM17 (ENSG00000186889) #37	B3GNT2 (ENSG00000170340)	COMMD1 (ENSG00000173163)
Orangutan	MODERN SPECIES	14	BMP10 (ENSPPYG00000012345)	ARHGAP25 (ENSPPYG00000012346) #7	PROKR1 (ENSPPYG00000012347) #8	APLF (ENSPPYG00000012348) #9	FBXO48 (ENSPPYG00000012736) #10	PLEK (ENSPPYG00000040535) #11	CNRIP1 (ENSPPYG00000012351) #12	PPP3R1 (ENSPPYG00000031425) #13	PNO1 (ENSPPYG00000033861) #14	DNAAF10 (ENSPPYG00000012352) #15	C1D (ENSPPYG00000012354) #16	ETAA1 (ENSPPYG00000012355) #17	ENSPPYG00000012356 #18	SPRED2 (ENSPPYG00000012358) #20	ACTR2 (ENSPPYG00000012359) #21	RAB1A (ENSPPYG00000012360) #22	CEP68 (ENSPPYG00000012361) #23	SLC1A4 (ENSPPYG00000041756) #24	SERTAD2 (ENSPPYG00000035823) #25	AFTPH (ENSPPYG00000012364) #26	ENSPPYG00000012365	LGALSL (ENSPPYG00000012366) #27	PELI1 (ENSPPYG00000012369) #29	VPS54 (ENSPPYG00000012370) #30	UGP2 (ENSPPYG00000012371) #31	MDH1 (ENSPPYG00000012373) #32	WDPCP (ENSPPYG00000012374) #33	OTX1 (ENSPPYG00000012376) #34	ENSPPYG00000030010	EHBP1 (ENSPPYG00000012377) #35	TMEM17 (ENSPPYG00000012378) #37
Gibbon	MODERN SPECIES	4	ARHGAP25 (ENSNLEG00000010028) #7	PROKR1 (ENSNLEG00000010024) #8	APLF (ENSNLEG00000010019) #9	FBXO48 (ENSNLEG00000010016) #10	PLEK (ENSNLEG00000010002) #11	CNRIP1 (ENSNLEG00000009999) #12	PPP3R1 (ENSNLEG00000026538) #13	PNO1 (ENSNLEG00000034233) #14	DNAAF10 (ENSNLEG00000030882) #15	ENSNLEG00000032919 #16	ETAA1 (ENSNLEG00000009972) #17	ENSNLEG00000009963 #18	ENSNLEG00000027615	SPRED2 (ENSNLEG00000009959) #20	ACTR2 (ENSNLEG00000009948) #21	RAB1A (ENSNLEG00000009944) #22	ENSNLEG00000009939 #23	SLC1A4 (ENSNLEG00000009927) #24	SERTAD2 (ENSNLEG00000029151) #25	ENSNLEG00000009923	AFTPH (ENSNLEG00000009902) #26	LGALSL (ENSNLEG00000031680) #27	ENSNLEG00000028443	PELI1 (ENSNLEG00000009891) #29	VPS54 (ENSNLEG00000009859) #30	UGP2 (ENSNLEG00000031494) #31	ENSNLEG00000035245	MDH1 (ENSNLEG00000009823) #32	WDPCP (ENSNLEG00000009810) #33	OTX1 (ENSNLEG00000009808) #34	ENSNLEG00000027460
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.mb #22	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.mb #22	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000010283.ab.a	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000155590.g.b	ENSGT00910000147398	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Macaca	ANCESTRAL SPECIES	17	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000010283.ab.a	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000155590.g.b	ENSGT00910000147398	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Macaca_a	DUPLICATION
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s.c #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Rhesus	MODERN SPECIES	4	ARHGAP25 (ENSMMUG00000015052) #7	PROKR1 (ENSMMUG00000052056) #8	APLF (ENSMMUG00000007552) #9	FBXO48 (ENSMMUG00000060845) #10	PLEK (ENSMMUG00000009195) #11	CNRIP1 (ENSMMUG00000046992) #12	PPP3R1 (ENSMMUG00000046264) #13	PNO1 (ENSMMUG00000017461) #14	DNAAF10 (ENSMMUG00000017460) #15	C1D (ENSMMUG00000017209) #16	ETAA1 (ENSMMUG00000062156) #17	ENSMMUG00000049443	MEIS1 (ENSMMUG00000011216) #18	SPRED2 (ENSMMUG00000044784) #20	ACTR2 (ENSMMUG00000002263) #21	RAB1A (ENSMMUG00000021721) #22	CEP68 (ENSMMUG00000017019) #23	SLC1A4 (ENSMMUG00000010279) #24	SERTAD2 (ENSMMUG00000047067) #25	ENSMMUG00000014862	AFTPH (ENSMMUG00000006503) #26	ENSMMUG00000006504	LGALSL (ENSMMUG00000064711) #27	PELI1 (ENSMMUG00000059267) #29	VPS54 (ENSMMUG00000008772) #30	UGP2 (ENSMMUG00000008770) #31	ENSMMUG00000060943	MDH1 (ENSMMUG00000006163) #32	WDPCP (ENSMMUG00000003979) #33	ENSMMUG00000030822	OTX1 (ENSMMUG00000051405) #34
Crab-eating macaque	MODERN SPECIES	4	APLF (ENSMFAG00000045051) #9	FBXO48 (ENSMFAG00000038551) #10	PLEK (ENSMFAG00000054603) #11	CNRIP1 (ENSMFAG00000035167) #12	PPP3R1 (ENSMFAG00000031560) #13	PNO1 (ENSMFAG00000043544) #14	ENSMFAG00000064848	DNAAF10 (ENSMFAG00000042360) #15	ENSMFAG00000034261 #16	ENSMFAG00000056299	ETAA1 (ENSMFAG00000039723) #17	MEIS1 (ENSMFAG00000042877) #18	SPRED2 (ENSMFAG00000031151) #20	ACTR2 (ENSMFAG00000044097) #21	ENSMFAG00000061807	ENSMFAG00000046246 #22	ENSMFAG00000064674	ENSMFAG00000049291	CEP68 (ENSMFAG00000041409) #23	SLC1A4 (ENSMFAG00000003847) #24	ENSMFAG00000053049	ENSMFAG00000062833	SERTAD2 (ENSMFAG00000037664) #25	ENSMFAG00000061518	ENSMFAG00000002213	AFTPH (ENSMFAG00000041331) #26	ENSMFAG00000035379	ENSMFAG00000031922 #27	ENSMFAG00000054126	PELI1 (ENSMFAG00000045683) #29	VPS54 (ENSMFAG00000042525) #30
Macaca_a	ANCESTRAL SPECIES																	ENSGT00940000154958.lb.a.b #22
Crab-eating macaque	MODERN SPECIES	19	SFR1 (ENSMFAG00000033346)	CFAP43 (ENSMFAG00000043638)	GSTO1 (ENSMFAG00000033599)	ENSMFAG00000061086	GSTO2 (ENSMFAG00000050681)	ITPRIP (ENSMFAG00000057374)	CFAP58 (ENSMFAG00000035977)	SORCS3 (ENSMFAG00000044111)	ENSMFAG00000050436	ENSMFAG00000046202	SORCS1 (ENSMFAG00000042566)	ENSMFAG00000056460	ENSMFAG00000058920	ENSMFAG00000058560	ENSMFAG00000011968	ENSMFAG00000055089 #22	ENSMFAG00000031866	ENSMFAG00000051095	XPNPEP1 (ENSMFAG00000030034)	ADD3 (ENSMFAG00000031457)	ENSMFAG00000056864	MXI1 (ENSMFAG00000030475)	ENSMFAG00000002433	ENSMFAG00000059019	ENSMFAG00000065587	DUSP5 (ENSMFAG00000002031)	ENSMFAG00000063112	SMC3 (ENSMFAG00000003098)	RBM20 (ENSMFAG00000036795)	ENSMFAG00000063286	ENSMFAG00000049620
Pig-tailed macaque	MODERN SPECIES	90																ENSMNEG00000028414 #22	ENSMNEG00000035210	XPNPEP1 (ENSMNEG00000029393)	ADD3 (ENSMNEG00000028760)	MXI1 (ENSMNEG00000034671)	ENSMNEG00000042963	ENSMNEG00000038014	DUSP5 (ENSMNEG00000033790)	SMC3 (ENSMNEG00000001042)	RBM20 (ENSMNEG00000030297)	PDCD4 (ENSMNEG00000043104)	BBIP1 (ENSMNEG00000041769)	SHOC2 (ENSMNEG00000039245)	ADRA2A (ENSMNEG00000006398)	ENSMNEG00000038669	GPAM (ENSMNEG00000041070)
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000010283.ab.a	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000155590.g.b	ENSGT00910000147398	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Olive baboon	MODERN SPECIES	5	ARHGAP25 (ENSPANG00000010754) #7	PROKR1 (ENSPANG00000048102) #8	APLF (ENSPANG00000010484) #9	FBXO48 (ENSPANG00000019905) #10	PLEK (ENSPANG00000005755) #11	CNRIP1 (ENSPANG00000029881) #12	PPP3R1 (ENSPANG00000024026) #13	ENSPANG00000031684 #14	DNAAF10 (ENSPANG00000011915) #15	C1D (ENSPANG00000002886) #16	ETAA1 (ENSPANG00000007449) #17	MEIS1 (ENSPANG00000008059) #18	ENSPANG00000049032	SPRED2 (ENSPANG00000015698) #20	ACTR2 (ENSPANG00000007073) #21	RAB1A (ENSPANG00000010485) #22	CEP68 (ENSPANG00000009710) #23	SLC1A4 (ENSPANG00000025917) #24	SERTAD2 (ENSPANG00000021214) #25	ENSPANG00000033862	AFTPH (ENSPANG00000019355) #26	LGALSL (ENSPANG00000007113) #27	PELI1 (ENSPANG00000008630) #29	VPS54 (ENSPANG00000022299) #30	UGP2 (ENSPANG00000020689) #31	MDH1 (ENSPANG00000014437) #32	ENSPANG00000006332	ENSPANG00000044221	WDPCP (ENSPANG00000019775) #33	OTX1 (ENSPANG00000038245) #34	EHBP1 (ENSPANG00000016912) #35
Cercopithecinae_d	ANCESTRAL SPECIES	32	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000010283.ab.a	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000155590.g.b	ENSGT00910000147398	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Drill	MODERN SPECIES	924										ENSMLEG00000040103	ETAA1 (ENSMLEG00000044155) #17	MEIS1 (ENSMLEG00000034716) #18	ENSMLEG00000042632	SPRED2 (ENSMLEG00000038726) #20	ACTR2 (ENSMLEG00000038155) #21	RAB1A (ENSMLEG00000042535) #22	CEP68 (ENSMLEG00000035123) #23	SLC1A4 (ENSMLEG00000036589) #24	ENSMLEG00000029653	SERTAD2 (ENSMLEG00000023036) #25	ENSMLEG00000028092	AFTPH (ENSMLEG00000030266) #26	LGALSL (ENSMLEG00000042260) #27
Sooty mangabey	MODERN SPECIES	494	APLF (ENSCATG00000015227) #9	FBXO48 (ENSCATG00000006573) #10	PLEK (ENSCATG00000037750) #11	CNRIP1 (ENSCATG00000037632) #12	PPP3R1 (ENSCATG00000036183) #13	PNO1 (ENSCATG00000018547) #14	DNAAF10 (ENSCATG00000028444) #15	C1D (ENSCATG00000045336) #16	ENSCATG00000033727	ETAA1 (ENSCATG00000036073) #17	MEIS1 (ENSCATG00000030958) #18	ENSCATG00000012177	ENSCATG00000045181	SPRED2 (ENSCATG00000034117) #20	ACTR2 (ENSCATG00000036025) #21	RAB1A (ENSCATG00000030853) #22	CEP68 (ENSCATG00000032378) #23	SLC1A4 (ENSCATG00000036187) #24	SERTAD2 (ENSCATG00000012102) #25	ENSCATG00000045350	AFTPH (ENSCATG00000032038) #26	LGALSL (ENSCATG00000029852) #27	PELI1 (ENSCATG00000031456) #29	VPS54 (ENSCATG00000000035) #30	UGP2 (ENSCATG00000038117) #31	ENSCATG00000010001	MDH1 (ENSCATG00000030537) #32	WDPCP (ENSCATG00000043458) #33	OTX1 (ENSCATG00000031998) #34	EHBP1 (ENSCATG00000030805) #35	TMEM17 (ENSCATG00000038173) #37
Rhinopithecus	ANCESTRAL SPECIES	327			ENSGT00390000017767.b.a	ENSGT00940000160181	ENSGT00940000155979	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00550000074816.A.a	ENSGT00940000156513	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00950000183424	ENSGT00940000158432	ENSGT00910000146982	ENSGT00940000155678	ENSGT00940000154958.lb.a #22	ENSGT00390000012474	ENSGT00770000121715	ENSGT00940000161165
Golden snub-nosed monkey	MODERN SPECIES	2939											CYRIA (ENSRROG00000031025)	ENSRROG00000010610	MYCN (ENSRROG00000041638)	ENSRROG00000031730	DDX1 (ENSRROG00000031167)	ENSRROG00000031865 #22	NBAS (ENSRROG00000043471)	ENSRROG00000035284	LRATD1 (ENSRROG00000010790)
Black snub-nosed monkey	MODERN SPECIES	374	ENSRBIG00000041134	ENSRBIG00000035661	DLG5 (ENSRBIG00000030077)	NT5C1B (ENSRBIG00000035028)	RDH14 (ENSRBIG00000031223)	KCNS3 (ENSRBIG00000031172)	MSGN1 (ENSRBIG00000031141)	GEN1 (ENSRBIG00000034123)	SMC6 (ENSRBIG00000032057)	VSNL1 (ENSRBIG00000043244)	RAD51AP2 (ENSRBIG00000041339)	CYRIA (ENSRBIG00000037805)	ENSRBIG00000016916	MYCN (ENSRBIG00000031158)	DDX1 (ENSRBIG00000041664)	ENSRBIG00000039266 #22	NBAS (ENSRBIG00000040798)	ENSRBIG00000000433	LRATD1 (ENSRBIG00000004537)
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.c #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.t #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00390000003682.ib.a.a.b.a	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556 #21	ENSGT00940000154277.a.b.a.b	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a.a.b #29	ENSGT00950000183050.b.b.a.a.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h.a.b #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Cebidae	ANCESTRAL SPECIES	15	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.c #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.t #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00390000003682.ib.a.a.b.a	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556 #21	ENSGT00940000154277.a.b.a.b	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a.a.b #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h.a.b #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345.m
Cebidae_a	ANCESTRAL SPECIES	30	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.c #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.t #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00390000003682.ib.a.a.b.a	ENSGT00940000156841 #20	ENSGT00910000147214	ENSGT00940000154556 #21	ENSGT00940000154277.a.b.a.b	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a.a.b #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h.a.b.b #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345.m	ENSGT00390000012029.h
Bolivian squirrel monkey	MODERN SPECIES	48	FBXO48 (ENSSBOG00000021207) #10	PLEK (ENSSBOG00000031071) #11	CNRIP1 (ENSSBOG00000020258) #12	PPP3R1 (ENSSBOG00000021442) #13	ENSSBOG00000026710 #14	DNAAF10 (ENSSBOG00000035020) #15	ENSSBOG00000025275 #16	ETAA1 (ENSSBOG00000020086) #17	MEIS1 (ENSSBOG00000000062) #18	ENSSBOG00000018908	SPRED2 (ENSSBOG00000000156) #20	ACTR2 (ENSSBOG00000028028) #21	ENSSBOG00000024339	ENSSBOG00000018757	ENSSBOG00000031295	RAB1A (ENSSBOG00000023732) #22	CEP68 (ENSSBOG00000033296) #23	SLC1A4 (ENSSBOG00000023405) #24	AFTPH (ENSSBOG00000027803) #26	ENSSBOG00000019039	LGALSL (ENSSBOG00000029775) #27	PELI1 (ENSSBOG00000001340) #29	VPS54 (ENSSBOG00000034598) #30	UGP2 (ENSSBOG00000035973) #31	ENSSBOG00000035941 #32	WDPCP (ENSSBOG00000020988) #33	OTX1 (ENSSBOG00000030274) #34	EHBP1 (ENSSBOG00000027993) #35	TMEM17 (ENSSBOG00000026954) #37	ENSSBOG00000019927	COMMD1 (ENSSBOG00000032499)
Capuchin	MODERN SPECIES	23	FBXO48 (ENSCCAG00000016980) #10	PLEK (ENSCCAG00000026558) #11	CNRIP1 (ENSCCAG00000034672) #12	PPP3R1 (ENSCCAG00000029751) #13	ENSCCAG00000017887	ENSCCAG00000030366 #14	DNAAF10 (ENSCCAG00000018459) #15	ENSCCAG00000030405 #16	ETAA1 (ENSCCAG00000027189) #17	ENSCCAG00000023051	MEIS1 (ENSCCAG00000020640) #18	SPRED2 (ENSCCAG00000035702) #20	ACTR2 (ENSCCAG00000030047) #21	ENSCCAG00000021773	ENSCCAG00000038117	RAB1A (ENSCCAG00000021869) #22	CEP68 (ENSCCAG00000022595) #23	ENSCCAG00000037790	SLC1A4 (ENSCCAG00000022825) #24	ENSCCAG00000032655	AFTPH (ENSCCAG00000022631) #26	ENSCCAG00000030319	LGALSL (ENSCCAG00000035879) #27	ENSCCAG00000033895 #29	VPS54 (ENSCCAG00000037148) #30	UGP2 (ENSCCAG00000038081) #31	ENSCCAG00000032985 #32	WDPCP (ENSCCAG00000026603) #33	OTX1 (ENSCCAG00000037783) #34	EHBP1 (ENSCCAG00000022934) #35	TMEM17 (ENSCCAG00000033287) #37
Mas night monkey	MODERN SPECIES	655												SPRED2 (ENSANAG00000024110) #20	ENSANAG00000020597	ACTR2 (ENSANAG00000038066) #21	ENSANAG00000038454	RAB1A (ENSANAG00000020929) #22	CEP68 (ENSANAG00000035796) #23	SLC1A4 (ENSANAG00000034703) #24	ENSANAG00000025925	AFTPH (ENSANAG00000033138) #26	LGALSL (ENSANAG00000035714) #27	ENSANAG00000026716	ENSANAG00000029544 #29	VPS54 (ENSANAG00000021718) #30	UGP2 (ENSANAG00000035096) #31	ENSANAG00000019559	ENSANAG00000038114 #32	ENSANAG00000029892	WDPCP (ENSANAG00000033928) #33	OTX1 (ENSANAG00000032160) #34	EHBP1 (ENSANAG00000022884) #35
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000154958.lb.b #22
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT00390000012446	ENSGT01030000234770
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT01030000234770	ENSGT00390000012446
Hominidae	ANCESTRAL SPECIES	17	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT01030000234770	ENSGT00390000012446
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT01030000234770	ENSGT00390000012446
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT01030000234770	ENSGT00390000012446
Pan	ANCESTRAL SPECIES	12	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT00390000012446	ENSGT01070000254198
Bonobo	MODERN SPECIES	15	C2orf66 (ENSPPAG00000029492)	GTF3C3 (ENSPPAG00000002745)	CCDC150 (ENSPPAG00000038945)	HECW2 (ENSPPAG00000033901)	STK17B (ENSPPAG00000023641)	ENSPPAG00000040576	DNAH7 (ENSPPAG00000039511)	SLC39A10 (ENSPPAG00000042493)	ENSPPAG00000043506	TMEFF2 (ENSPPAG00000008977)	ENSPPAG00000043388	CAVIN2 (ENSPPAG00000041899)	NABP1 (ENSPPAG00000016940)	MYO1B (ENSPPAG00000039631)	STAT4 (ENSPPAG00000038188)	ENSPPAG00000041123 #22	STAT1 (ENSPPAG00000039583)	GLS (ENSPPAG00000025885)	NAB1 (ENSPPAG00000001818)	NEMP2 (ENSPPAG00000025075)	MFSD6 (ENSPPAG00000039522)	INPP1 (ENSPPAG00000037765)	ENSPPAG00000034445	C2orf88 (ENSPPAG00000026004)	MSTN (ENSPPAG00000035642)	PMS1 (ENSPPAG00000012384)	ORMDL1 (ENSPPAG00000041520)	OSGEPL1 (ENSPPAG00000037207)	ANKAR (ENSPPAG00000039080)	ENSPPAG00000037076	ASNSD1 (ENSPPAG00000028748)
Chimpanzee	MODERN SPECIES	15	PGAP1 (ENSPTRG00000012769)	C2BH2orf66 (ENSPTRG00000012768)	GTF3C3 (ENSPTRG00000012767)	CCDC150 (ENSPTRG00000012765)	HECW2 (ENSPTRG00000012764)	STK17B (ENSPTRG00000012763)	ENSPTRG00000047674	DNAH7 (ENSPTRG00000012761)	SLC39A10 (ENSPTRG00000012760)	ENSPTRG00000048383	TMEFF2 (ENSPTRG00000012756)	CAVIN2 (ENSPTRG00000012755)	NABP1 (ENSPTRG00000012754)	MYO1B (ENSPTRG00000023453)	STAT4 (ENSPTRG00000047534)	ENSPTRG00000045283 #22	STAT1 (ENSPTRG00000012749)	GLS (ENSPTRG00000012747)	NAB1 (ENSPTRG00000012746)	NEMP2 (ENSPTRG00000012745)	MFSD6 (ENSPTRG00000012743)	INPP1 (ENSPTRG00000012742)	HIBCH (ENSPTRG00000012741)	C2BH2orf88 (ENSPTRG00000012740)	MSTN (ENSPTRG00000012738)	ENSPTRG00000046804	PMS1 (ENSPTRG00000012737)	ORMDL1 (ENSPTRG00000012736)	OSGEPL1 (ENSPTRG00000012735)	ANKAR (ENSPTRG00000012733)	ENSPTRG00000044371
Gorilla	MODERN SPECIES	15	C2orf66 (ENSGGOG00000038009)	GTF3C3 (ENSGGOG00000011787)	CCDC150 (ENSGGOG00000010004)	HECW2 (ENSGGOG00000013295)	STK17B (ENSGGOG00000016830)	DNAH7 (ENSGGOG00000008893)	ENSGGOG00000037015	SLC39A10 (ENSGGOG00000008154)	ENSGGOG00000041675	TMEFF2 (ENSGGOG00000007989)	ENSGGOG00000015813	CAVIN2 (ENSGGOG00000001639)	NABP1 (ENSGGOG00000036855)	MYO1B (ENSGGOG00000002321)	STAT4 (ENSGGOG00000042976)	ENSGGOG00000043398 #22	STAT1 (ENSGGOG00000000611)	GLS (ENSGGOG00000007590)	NAB1 (ENSGGOG00000013842)	NEMP2 (ENSGGOG00000015874)	MFSD6 (ENSGGOG00000025721)	INPP1 (ENSGGOG00000015605)	HIBCH (ENSGGOG00000004988)	C2orf88 (ENSGGOG00000025627)	MSTN (ENSGGOG00000027833)	PMS1 (ENSGGOG00000025218)	ORMDL1 (ENSGGOG00000015259)	OSGEPL1 (ENSGGOG00000027223)	ANKAR (ENSGGOG00000016191)	ENSGGOG00000041328	ASNSD1 (ENSGGOG00000001328)
Gibbon	MODERN SPECIES	14	HECW2 (ENSNLEG00000006821)	STK17B (ENSNLEG00000006813)	ENSNLEG00000033012	DNAH7 (ENSNLEG00000006803)	SLC39A10 (ENSNLEG00000006791)	ENSNLEG00000028697	ENSNLEG00000034807	ENSNLEG00000035441	ENSNLEG00000031318	TMEFF2 (ENSNLEG00000006778)	ENSNLEG00000013541	CAVIN2 (ENSNLEG00000006776)	NABP1 (ENSNLEG00000030065)	MYO1B (ENSNLEG00000006735)	STAT4 (ENSNLEG00000006726)	ENSNLEG00000006724 #22	STAT1 (ENSNLEG00000006694)	ENSNLEG00000006675	NAB1 (ENSNLEG00000035600)	ENSNLEG00000026634	MFSD6 (ENSNLEG00000006661)	INPP1 (ENSNLEG00000006655)	HIBCH (ENSNLEG00000006646)	C2orf88 (ENSNLEG00000006645)	MSTN (ENSNLEG00000006642)	PMS1 (ENSNLEG00000006628)	ORMDL1 (ENSNLEG00000006625)	OSGEPL1 (ENSNLEG00000006619)	ANKAR (ENSNLEG00000006610)	ENSNLEG00000027789	ASNSD1 (ENSNLEG00000006606)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000155059.f.a.a	ENSGT00390000008666.d.b	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000155059.f.a.a	ENSGT00390000008666.d.b	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00390000014165.c.a.b.b.b.q.k	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000155059.f.a.a	ENSGT00390000008666.d.b	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00390000014165.c.a.b.b.b.q.k	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000155059.f.a.a	ENSGT00390000008666.d.b	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00390000014165.c.a.b.b.b.q.k	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000155059.f.a.a	ENSGT00390000008666.d.b	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065
Sooty mangabey	MODERN SPECIES	570	GTF3C3 (ENSCATG00000041160)	CCDC150 (ENSCATG00000039440)	HECW2 (ENSCATG00000042498)	STK17B (ENSCATG00000041109)	ENSCATG00000041947	ENSCATG00000005122	DNAH7 (ENSCATG00000044354)	SLC39A10 (ENSCATG00000003457)	ENSCATG00000038644	TMEFF2 (ENSCATG00000044161)	ENSCATG00000041477	CAVIN2 (ENSCATG00000042767)	NABP1 (ENSCATG00000038449)	MYO1B (ENSCATG00000029501)	STAT4 (ENSCATG00000015585)	ENSCATG00000039791 #22	STAT1 (ENSCATG00000039195)	GLS (ENSCATG00000035136)	NAB1 (ENSCATG00000043564)	NEMP2 (ENSCATG00000037139)	MFSD6 (ENSCATG00000044632)	INPP1 (ENSCATG00000038582)	HIBCH (ENSCATG00000035931)	C2orf88 (ENSCATG00000002994)	MSTN (ENSCATG00000041487)	ENSCATG00000005962	ENSCATG00000038138	PMS1 (ENSCATG00000034295)	ORMDL1 (ENSCATG00000037728)	OSGEPL1 (ENSCATG00000041932)	ANKAR (ENSCATG00000036884)
Drill	MODERN SPECIES	440								ENSMLEG00000029437	ENSMLEG00000001178	TMEFF2 (ENSMLEG00000031779)	CAVIN2 (ENSMLEG00000037420)	NABP1 (ENSMLEG00000038424)	MYO1B (ENSMLEG00000043715)	STAT4 (ENSMLEG00000032638)	STAT1 (ENSMLEG00000038755)	ENSMLEG00000038983 #22	GLS (ENSMLEG00000043417)	NAB1 (ENSMLEG00000042030)	NEMP2 (ENSMLEG00000003080)	MFSD6 (ENSMLEG00000037622)	INPP1 (ENSMLEG00000031756)	HIBCH (ENSMLEG00000029940)	C2orf88 (ENSMLEG00000002411)	MSTN (ENSMLEG00000009875)	ENSMLEG00000015243	ENSMLEG00000032655	PMS1 (ENSMLEG00000043721)	ENSMLEG00000037268	ORMDL1 (ENSMLEG00000038631)	OSGEPL1 (ENSMLEG00000028233)	ANKAR (ENSMLEG00000038848)
Rhinopithecus	ANCESTRAL SPECIES	321									ENSGT00940000156056.A	ENSGT00940000160312.f	ENSGT00950000182910.a.a.a	ENSGT00940000157820.a.b	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT00940000154958.lb.b #22	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a.i	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785.h	ENSGT00890000139491.e	ENSGT00390000011537	ENSGT00940000160657
Golden snub-nosed monkey	MODERN SPECIES	2182													ENSRROG00000008432	MYO1B (ENSRROG00000032066)	STAT4 (ENSRROG00000045074)	ENSRROG00000041477 #22	STAT1 (ENSRROG00000040303)	GLS (ENSRROG00000042018)	NAB1 (ENSRROG00000034786)	NEMP2 (ENSRROG00000043510)	MFSD6 (ENSRROG00000043337)	INPP1 (ENSRROG00000028979)	C2orf88 (ENSRROG00000025891)	HIBCH (ENSRROG00000036643)	MSTN (ENSRROG00000003026)
Black snub-nosed monkey	MODERN SPECIES	287											ENSRBIG00000017988	NABP1 (ENSRBIG00000018759)	MYO1B (ENSRBIG00000039167)	STAT4 (ENSRBIG00000031959)	STAT1 (ENSRBIG00000041866)	ENSRBIG00000034734 #22	GLS (ENSRBIG00000028313)
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00940000154958.lb.b #22	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT00390000012446	ENSGT01030000234770	ENSGT00390000015143
Cebidae	ANCESTRAL SPECIES	11	ENSGT00950000182908.D	ENSGT00390000016484	ENSGT00390000009468	ENSGT00390000016929	ENSGT00390000005285	ENSGT00940000155466	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00940000154958.lb.b #22	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491	ENSGT00390000011537	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT00390000012446	ENSGT01030000234770	ENSGT00390000015143
Cebidae_a	ANCESTRAL SPECIES	107										ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00940000154958.lb.b #22	ENSGT00390000010463.a.b	ENSGT00390000006330.a.a	ENSGT00390000002174.b	ENSGT00530000063599.B	ENSGT00940000156785	ENSGT00890000139491	ENSGT00940000160657	ENSGT00940000157085	ENSGT00950000183178.b.a	ENSGT00940000153744.A	ENSGT00680000100065	ENSGT00390000012446	ENSGT01070000254198	ENSGT00390000015143	ENSGT00940000154770.q.a.b.b
Bolivian squirrel monkey	MODERN SPECIES	177								TMEFF2 (ENSSBOG00000032615)	CAVIN2 (ENSSBOG00000027082)	NABP1 (ENSSBOG00000029846)	ENSSBOG00000024257	ENSSBOG00000025845	MYO1B (ENSSBOG00000024212)	STAT4 (ENSSBOG00000028696)	STAT1 (ENSSBOG00000021364)	ENSSBOG00000025345 #22	GLS (ENSSBOG00000032290)	ENSSBOG00000021637	ENSSBOG00000024065	NAB1 (ENSSBOG00000028629)	NEMP2 (ENSSBOG00000025986)	MFSD6 (ENSSBOG00000027092)	INPP1 (ENSSBOG00000033808)	HIBCH (ENSSBOG00000022609)	MSTN (ENSSBOG00000026528)	PMS1 (ENSSBOG00000033196)	ORMDL1 (ENSSBOG00000032805)	OSGEPL1 (ENSSBOG00000031666)	ANKAR (ENSSBOG00000030320)	ASNSD1 (ENSSBOG00000007659)	ENSSBOG00000016302
Marmoset	MODERN SPECIES	18	ENSCJAG00000010515	MAP3K2 (ENSCJAG00000010475)	ERCC3 (ENSCJAG00000010416)	ENSCJAG00000070344	ENSCJAG00000074639	CYP27C1 (ENSCJAG00000010387)	ENSCJAG00000010218	ENSCJAG00000046931	ENSCJAG00000000889	ENSCJAG00000083259	ENSCJAG00000066008	ENSCJAG00000083914	ENSCJAG00000076732	STAT4 (ENSCJAG00000005895)	STAT1 (ENSCJAG00000005819)	ENSCJAG00000063639 #22	GLS (ENSCJAG00000005763)	NAB1 (ENSCJAG00000005748)	ENSCJAG00000079078	NEMP2 (ENSCJAG00000005743)	MFSD6 (ENSCJAG00000005733)	INPP1 (ENSCJAG00000005706)	HIBCH (ENSCJAG00000005679)	C2orf88 (ENSCJAG00000005673)	ENSCJAG00000075719	MSTN (ENSCJAG00000005664)	PMS1 (ENSCJAG00000005590)	ENSCJAG00000048656	ENSCJAG00000002739	ENSCJAG00000077119	ENSCJAG00000055386
Mas night monkey	MODERN SPECIES	595															STAT4 (ENSANAG00000024671)	ENSANAG00000029760 #22	STAT1 (ENSANAG00000027993)	GLS (ENSANAG00000007551)
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000154958.mb #22
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000154958.mb #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000154958.mb #22
Marmoset	MODERN SPECIES	5	PLEK (ENSCJAG00000006477) #11	CNRIP1 (ENSCJAG00000039706) #12	PPP3R1 (ENSCJAG00000006498) #13	PNO1 (ENSCJAG00000006564) #14	DNAAF10 (ENSCJAG00000044589) #15	ENSCJAG00000006589 #16	ENSCJAG00000083243	ETAA1 (ENSCJAG00000006604) #17	MEIS1 (ENSCJAG00000006613) #18	ENSCJAG00000073899	ENSCJAG00000067866	ENSCJAG00000079193	ENSCJAG00000080598	SPRED2 (ENSCJAG00000006693) #20	ACTR2 (ENSCJAG00000006722) #21	ENSCJAG00000046275 #22	ENSCJAG00000074307	ENSCJAG00000072263	CEP68 (ENSCJAG00000006788) #23	SLC1A4 (ENSCJAG00000006795) #24	ENSCJAG00000074052	ENSCJAG00000074553	SERTAD2 (ENSCJAG00000006818) #25	AFTPH (ENSCJAG00000006819) #26	ENSCJAG00000046867	ENSCJAG00000006878 #27	ENSCJAG00000070703	PELI1 (ENSCJAG00000006889) #29	VPS54 (ENSCJAG00000006914) #30	UGP2 (ENSCJAG00000006960) #31	ENSCJAG00000007018 #32
Catarrhini	ANCESTRAL SPECIES																	ENSGT00940000154958.mb #22
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.mb #22	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37
Rhinopithecus	ANCESTRAL SPECIES	395											ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556.tb.a #21	ENSGT00940000155078.a.b.a.b	ENSGT00940000154958.mb #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29
Black snub-nosed monkey	MODERN SPECIES	2273															ENSRBIG00000037473	ENSRBIG00000042206 #22
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	2968																ENSRROG00000038212 #22	ENSRROG00000030886	ENSRROG00000043934	SHCBP1 (ENSRROG00000044250)	VPS35 (ENSRROG00000040561)	ORC6 (ENSRROG00000000515)	MYLK3 (ENSRROG00000044699)	C16orf87 (ENSRROG00000027463)	GPT2 (ENSRROG00000042469)	DNAJA2 (ENSRROG00000041281)	NETO2 (ENSRROG00000041130)	ITFG1 (ENSRROG00000038711)	PHKB (ENSRROG00000033180)	ENSRROG00000012670	ABCC12 (ENSRROG00000033734)	ABCC11 (ENSRROG00000034803)
Golden snub-nosed monkey	MODERN SPECIES	3026												MEIS1 (ENSRROG00000036544) #18	SPRED2 (ENSRROG00000031997) #20	ENSRROG00000040495	ACTR2 (ENSRROG00000043956) #21	ENSRROG00000044448 #22	CEP68 (ENSRROG00000030391) #23	SLC1A4 (ENSRROG00000032007) #24	ENSRROG00000042327	SERTAD2 (ENSRROG00000026882) #25	ENSRROG00000038317 #26
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000156279	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052.l.b #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405.s #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00940000154556.tb.a #21	ENSGT00940000154958.mb #22	ENSGT00940000154958.lb.a #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00390000001858	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.h #32	ENSGT00390000016551 #33	ENSGT00950000182995.e.a.a.a.bb.b	ENSGT00940000161234 #34	ENSGT00940000157597 #35
Cercopithecinae_a	DUPLICATION
Cercopithecinae_a	DUPLICATION
Cercopithecinae_a	DUPLICATION
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.a.a #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.a.a #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.a.a #22
Drill	MODERN SPECIES	344																ENSMLEG00000028287 #22
Macaca	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.a.a #22
Pig-tailed macaque	MODERN SPECIES	380											SHCBP1 (ENSMNEG00000029402)	ENSMNEG00000028935	ENSMNEG00000028852	ENSMNEG00000028604 #22	ENSMNEG00000028034	ENSMNEG00000000645 #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.a.b #22
Macaca	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.a.b #22
Pig-tailed macaque	MODERN SPECIES	380														ENSMNEG00000000645 #22	ENSMNEG00000028034	ENSMNEG00000028604 #22	ENSMNEG00000028852	ENSMNEG00000028935	SHCBP1 (ENSMNEG00000029402)
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.b #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.b #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.c.b #22
Drill	MODERN SPECIES	720																ENSMLEG00000028592 #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.d #22
Macaca	ANCESTRAL SPECIES																	ENSGT00940000154958.mb.d #22
Pig-tailed macaque	MODERN SPECIES	341	APLF (ENSMNEG00000028788) #9	FBXO48 (ENSMNEG00000026784) #10	PLEK (ENSMNEG00000029803) #11	CNRIP1 (ENSMNEG00000028096) #12	PPP3R1 (ENSMNEG00000043603) #13	ENSMNEG00000031066 #14	DNAAF10 (ENSMNEG00000027774) #15	C1D (ENSMNEG00000040612) #16	ENSMNEG00000038737	ETAA1 (ENSMNEG00000043227) #17	MEIS1 (ENSMNEG00000037352) #18	ENSMNEG00000023818	ENSMNEG00000004414	SPRED2 (ENSMNEG00000028343) #20	ACTR2 (ENSMNEG00000044163) #21	ENSMNEG00000042121 #22	CEP68 (ENSMNEG00000032212) #23	SLC1A4 (ENSMNEG00000004689) #24	ENSMNEG00000006388	SERTAD2 (ENSMNEG00000008861) #25	ENSMNEG00000025227	AFTPH (ENSMNEG00000040816) #26	LGALSL (ENSMNEG00000029755) #27	PELI1 (ENSMNEG00000030553) #29	VPS54 (ENSMNEG00000031281) #30	UGP2 (ENSMNEG00000038452) #31	MDH1 (ENSMNEG00000039034) #32	WDPCP (ENSMNEG00000030809) #33	OTX1 (ENSMNEG00000044308) #34	EHBP1 (ENSMNEG00000043070) #35	ENSMNEG00000038346
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.g.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Bushbaby	MODERN SPECIES	139															ENSOGAG00000005688 #21	RAB1A (ENSOGAG00000026181) #22	CEP68 (ENSOGAG00000005687) #23	SLC1A4 (ENSOGAG00000005682) #24	SERTAD2 (ENSOGAG00000011272) #25	ENSOGAG00000011268 #26	LGALSL (ENSOGAG00000007901) #27	PELI1 (ENSOGAG00000013984) #29	VPS54 (ENSOGAG00000013980) #30	UGP2 (ENSOGAG00000013975) #31	ENSOGAG00000014487 #32	WDPCP (ENSOGAG00000026615) #33	OTX1 (ENSOGAG00000027686) #34	EHBP1 (ENSOGAG00000005236) #35	TMEM17 (ENSOGAG00000015014) #37	ENSOGAG00000028774	COMMD1 (ENSOGAG00000029292)
Lemuriformes	ANCESTRAL SPECIES	19	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00390000001858	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.g.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345
Lemuriformes_a	ANCESTRAL SPECIES	52	ENSGT00950000183015.A #7	ENSGT00940000154544.a #8	ENSGT00390000010591 #9	ENSGT00390000012248 #10	ENSGT00940000157885 #11	ENSGT00390000004284 #12	ENSGT00940000156530.c #13	ENSGT00390000018052 #14	ENSGT00950000183091.A.b #15	ENSGT00390000015405 #16	ENSGT00390000009597 #17	ENSGT00940000156327 #18	ENSGT00940000156841 #20	ENSGT00910000147398	ENSGT00940000154556 #21	ENSGT00940000154958 #22	ENSGT00810000125473.A #23	ENSGT00940000157081 #24	ENSGT00530000063867.b #25	ENSGT00940000154186.a #26	ENSGT00940000155337 #27	ENSGT00950000183050.b.b.a #29	ENSGT00390000000583 #30	ENSGT00940000153464.B #31	ENSGT00530000063410.a.g.a #32	ENSGT00390000016551 #33	ENSGT00940000161234 #34	ENSGT00940000157597 #35	ENSGT00940000153899.b.b #37	ENSGT00940000155345	ENSGT00390000012029
Coquerels sifaka	MODERN SPECIES	157											MEIS1 (ENSPCOG00000026417) #18	ENSPCOG00000017120	ENSPCOG00000003824	SPRED2 (ENSPCOG00000021475) #20	ACTR2 (ENSPCOG00000025808) #21	RAB1A (ENSPCOG00000017244) #22	CEP68 (ENSPCOG00000017947) #23	SLC1A4 (ENSPCOG00000008394) #24	ENSPCOG00000014082	AFTPH (ENSPCOG00000015597) #26	LGALSL (ENSPCOG00000024215) #27	PELI1 (ENSPCOG00000016939) #29	VPS54 (ENSPCOG00000021532) #30	UGP2 (ENSPCOG00000021592) #31	ENSPCOG00000022476 #32	WDPCP (ENSPCOG00000021207) #33	OTX1 (ENSPCOG00000007128) #34	EHBP1 (ENSPCOG00000013807) #35	TMEM17 (ENSPCOG00000003689) #37	COMMD1 (ENSPCOG00000002593)	CCT4 (ENSPCOG00000024760)
Greater bamboo lemur	MODERN SPECIES	617		PROKR1 (ENSPSMG00000000830) #8	APLF (ENSPSMG00000000808) #9	ENSPSMG00000000764 #10	PLEK (ENSPSMG00000000754) #11	CNRIP1 (ENSPSMG00000000727) #12	PPP3R1 (ENSPSMG00000000675) #13	PNO1 (ENSPSMG00000000616) #14	DNAAF10 (ENSPSMG00000000572) #15	C1D (ENSPSMG00000000528) #16	ETAA1 (ENSPSMG00000000519) #17	MEIS1 (ENSPSMG00000000482) #18	SPRED2 (ENSPSMG00000000404) #20	ACTR2 (ENSPSMG00000000347) #21	ENSPSMG00000000286	RAB1A (ENSPSMG00000000273) #22	CEP68 (ENSPSMG00000000219) #23	SLC1A4 (ENSPSMG00000000139) #24	SERTAD2 (ENSPSMG00000024045) #25	AFTPH (ENSPSMG00000024022) #26	LGALSL (ENSPSMG00000023973) #27
Mouse lemur	MODERN SPECIES	26	BMP10 (ENSMICG00000044994)	ARHGAP25 (ENSMICG00000003739) #7	PROKR1 (ENSMICG00000045105) #8	ENSMICG00000003735 #9	FBXO48 (ENSMICG00000027392) #10	PLEK (ENSMICG00000003728) #11	CNRIP1 (ENSMICG00000003722) #12	PPP3R1 (ENSMICG00000037583) #13	ENSMICG00000010897 #14	DNAAF10 (ENSMICG00000010876) #15	C1D (ENSMICG00000032141) #16	ETAA1 (ENSMICG00000033585) #17	MEIS1 (ENSMICG00000017054) #18	SPRED2 (ENSMICG00000006435) #20	ENSMICG00000036415 #21	RAB1A (ENSMICG00000012587) #22	CEP68 (ENSMICG00000037255) #23	SLC1A4 (ENSMICG00000012577) #24	ENSMICG00000041471	ENSMICG00000044806	AFTPH (ENSMICG00000037342) #26	LGALSL (ENSMICG00000031755) #27	PELI1 (ENSMICG00000044746) #29	VPS54 (ENSMICG00000035608) #30	UGP2 (ENSMICG00000006509) #31	ENSMICG00000015195 #32	WDPCP (ENSMICG00000017077) #33	OTX1 (ENSMICG00000032707) #34	ENSMICG00000036558	EHBP1 (ENSMICG00000011224) #35	ENSMICG00000035187