Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a ENSGT01090000260017.c.b.b.c.b Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a ENSGT01090000260017.c.b.b.c.a Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.a ENSGT01090000260017.c.b.b.c.a ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.d Glires ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.a ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.c.a Rodentia ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.a.k.a.b ENSGT01090000260017.c.b.a.a.k.b.a ENSGT01090000260017.c.b.b.c.b Rodentia_B ANCESTRAL SPECIES 2 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.a.k.b.b ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.a.a.k.b.a ENSGT01090000260017.c.b.a.a.k.a.b Myomorpha ANCESTRAL SPECIES 14 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.a.k.a.b ENSGT01090000260017.c.b.a.a.k.b.a ENSGT01090000260017.c.b.a.a.k.a.a.b Muroidea ANCESTRAL SPECIES 11 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.a.a.k.b.b ENSGT01090000260017.c.b.a.a.k.a.b.a ENSGT01090000260017.c.b.a.a.k.b.a Upper Galilee mountains blind mole rat MODERN SPECIES 777 ENSNGAG00000023156 #12 Cadm2 (ENSNGAG00000004965) #13 Vgll3 (ENSNGAG00000003374) #14 Chmp2b (ENSNGAG00000019032) #15 Pou1f1 (ENSNGAG00000021408) #16 Htr1f (ENSNGAG00000014106) #17 Cggbp1 (ENSNGAG00000023018) #18 Zfp654 (ENSNGAG00000023561) #19 4930453N24Rik (ENSNGAG00000014091) #20 ENSNGAG00000002527 #21 Epha3 (ENSNGAG00000010567) #22 Pros1 (ENSNGAG00000022921) #23 Arl13b (ENSNGAG00000002155) #24 Stx19 (ENSNGAG00000013780) #25 Nsun3 (ENSNGAG00000015857) #26 ENSNGAG00000013664 #27 Muroidea_A ANCESTRAL SPECIES 17 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.b.a.b.e.a Cricetidae ANCESTRAL SPECIES 16 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.b.a.b.e.a ENSGT01090000260017.c.b.a.b.a.b.e.b Cricetinae ANCESTRAL SPECIES 10 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b.sd #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.b.a.b.e.a ENSGT01090000260017.c.b.a.b.a.b.e.b Golden Hamster MODERN SPECIES 682 ENSMAUG00000016675 Htr1f (ENSMAUG00000006269) #17 Cggbp1 (ENSMAUG00000000993) #18 Zfp654 (ENSMAUG00000000720) #19 ENSMAUG00000012990 #20 Csnka2ip (ENSMAUG00000001425) Epha3 (ENSMAUG00000011923) #22 ENSMAUG00000020620 #23 Stx19 (ENSMAUG00000004341) #25 Arl13b (ENSMAUG00000017043) #24 Nsun3 (ENSMAUG00000013661) #26 ENSMAUG00000000427 Epha6 (ENSMAUG00000005573) Arl6 (ENSMAUG00000016932) ENSMAUG00000003633 Riox2 (ENSMAUG00000015559) Gabrr3 (ENSMAUG00000002909) ENSMAUG00000014628 ENSMAUG00000020049 ENSMAUG00000003355 ENSMAUG00000009870 Or5h22 (ENSMAUG00000016059) Chinese hamster chok1gshd MODERN SPECIES 382 Robo2 (ENSCGRG00001016343) Robo1 (ENSCGRG00001016390) ENSCGRG00001011950 Gbe1 (ENSCGRG00001024765) #12 Cadm2 (ENSCGRG00001010982) #13 Vgll3 (ENSCGRG00001015980) #14 Chmp2b (ENSCGRG00001022834) #15 Pou1f1 (ENSCGRG00001011471) #16 ENSCGRG00001022071 ENSCGRG00001017747 Htr1f (ENSCGRG00001010649) #17 Cggbp1 (ENSCGRG00001010279) #18 Zfp654 (ENSCGRG00001020292) #19 4930453N24Rik (ENSCGRG00001015042) #20 Csnka2ip (ENSCGRG00001014750) Epha3 (ENSCGRG00001006199) #22 ENSCGRG00001009587 #23 Stx19 (ENSCGRG00001001896) #25 Arl13b (ENSCGRG00001022552) #24 Nsun3 (ENSCGRG00001013850) #26 ENSCGRG00001011827 ENSCGRG00001023290 ENSCGRG00001018957 ENSCGRG00001010094 Arl6 (ENSCGRG00001021791) ENSCGRG00001006924 ENSCGRG00001021101 Gabrr3 (ENSCGRG00001012824) Or5ac25 (ENSCGRG00001004546) ENSCGRG00001004066 ENSCGRG00001009832 Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.b.c.b.h ENSGT01090000260017.c.b.a.a.k.a.b.a ENSGT01090000260017.c.b.a.a.k.b.a ENSGT01090000260017.c.b.a.a.k.a.a.b ENSGT01090000260017.c.b.a.b.a.b.e.a Prairie vole MODERN SPECIES 7 Robo1 (ENSMOCG00000012004) ENSMOCG00000002617 Gbe1 (ENSMOCG00000014132) #12 ENSMOCG00000002638 Cadm2 (ENSMOCG00000005664) #13 ENSMOCG00000001418 Vgll3 (ENSMOCG00000002854) #14 Chmp2b (ENSMOCG00000017221) #15 Pou1f1 (ENSMOCG00000021592) #16 Htr1f (ENSMOCG00000001706) #17 Cggbp1 (ENSMOCG00000008622) #18 Zfp654 (ENSMOCG00000015545) #19 4930453N24Rik (ENSMOCG00000017673) #20 ENSMOCG00000020136 Csnka2ip (ENSMOCG00000021636) Epha3 (ENSMOCG00000001171) #22 Pros1 (ENSMOCG00000007118) #23 Arl13b (ENSMOCG00000015922) #24 Stx19 (ENSMOCG00000016404) #25 Nsun3 (ENSMOCG00000017349) #26 Epha6 (ENSMOCG00000002313) Arl6 (ENSMOCG00000022581) ENSMOCG00000005759 Riox2 (ENSMOCG00000021075) Gabrr3 (ENSMOCG00000000879) ENSMOCG00000022288 ENSMOCG00000017758 ENSMOCG00000009618 ENSMOCG00000022005 ENSMOCG00000009340 ENSMOCG00000012334 Northern American deer mouse MODERN SPECIES 3 Robo2 (ENSPEMG00000016316) Robo1 (ENSPEMG00000009052) ENSPEMG00000014520 ENSPEMG00000027253 Gbe1 (ENSPEMG00000013730) #12 Cadm2 (ENSPEMG00000013822) #13 ENSPEMG00000028698 Vgll3 (ENSPEMG00000024260) #14 Chmp2b (ENSPEMG00000021780) #15 Pou1f1 (ENSPEMG00000020986) #16 Htr1f (ENSPEMG00000007260) #17 Cggbp1 (ENSPEMG00000030922) #18 Zfp654 (ENSPEMG00000010590) #19 4930453N24Rik (ENSPEMG00000009356) #20 ENSPEMG00000025327 Epha3 (ENSPEMG00000021373) #22 Pros1 (ENSPEMG00000011653) #23 Stx19 (ENSPEMG00000020390) #25 Arl13b (ENSPEMG00000017809) #24 Nsun3 (ENSPEMG00000018396) #26 ENSPEMG00000014808 Epha6 (ENSPEMG00000010772) Arl6 (ENSPEMG00000021089) ENSPEMG00000014782 Riox2 (ENSPEMG00000016949) Gabrr3 (ENSPEMG00000010323) ENSPEMG00000024995 ENSPEMG00000027094 ENSPEMG00000014612 ENSPEMG00000027666 ENSPEMG00000030235 Murinae ANCESTRAL SPECIES 13 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b ENSGT01090000260017.c.b.a.b.b.r.a.b.b.b.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.a.b.e.a ENSGT01090000260017.c.b.a.b.a.b.e.b Mus ANCESTRAL SPECIES 13 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.a.b.e.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a ENSGT01090000260017.c.b.a.b.a.b.e.b Mus_A ANCESTRAL SPECIES 18 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000153178.B.d.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a ENSGT01090000260017.c.b.a.b.b.q.d ENSGT01090000260017.c.b.a.b.a.b.e.a Mus_B ANCESTRAL SPECIES 18 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000153178.B.d.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a ENSGT01090000260017.c.b.a.b.b.q.d ENSGT01090000260017.c.b.a.b.a.b.e.a Mus_C ANCESTRAL SPECIES 12 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a ENSGT01090000260017.c.b.a.b.b.q.d ENSGT01090000260017.c.b.a.b.a.b.e.a ENSGT01090000260017.c.b.a.b.a.b.e.b.c Steppe mouse MODERN SPECIES 3279 Htr1f (ENSMSIG00000021469) #17 ENSMSIG00000021413 Cggbp1 (ENSMSIG00000021398) #18 Zfp654 (ENSMSIG00000021369) #19 ENSMSIG00000021355 #20 ENSMSIG00000021344 Csnka2ip (ENSMSIG00000021335) Epha3 (ENSMSIG00000021215) #22 Pros1 (ENSMSIG00000021194) #23 Stx19 (ENSMSIG00000021192) #25 Arl13b (ENSMSIG00000021172) #24 ENSMSIG00000021166 Nsun3 (ENSMSIG00000021155) #26 spretus MODERN SPECIES 7 Hspa13 (MGP_SPRETEiJ_G0021781) Rbm11 (MGP_SPRETEiJ_G0021780) Lipi (MGP_SPRETEiJ_G0021779) Robo2 (MGP_SPRETEiJ_G0021778) Robo1 (MGP_SPRETEiJ_G0021777) Gbe1 (MGP_SPRETEiJ_G0021776) #12 MGP_SPRETEiJ_G0021775 Cadm2 (MGP_SPRETEiJ_G0021774) #13 Vgll3 (MGP_SPRETEiJ_G0021773) #14 Pou1f1 (MGP_SPRETEiJ_G0021772) #16 Chmp2b (MGP_SPRETEiJ_G0021771) #15 Htr1f (MGP_SPRETEiJ_G0021770) #17 Cggbp1 (MGP_SPRETEiJ_G0021769) #18 MGP_SPRETEiJ_G0021768 #19 MGP_SPRETEiJ_G0021767 Epha3 (MGP_SPRETEiJ_G0021766) #22 Pros1 (MGP_SPRETEiJ_G0021765) #23 Stx19 (MGP_SPRETEiJ_G0021764) #25 Arl13b (MGP_SPRETEiJ_G0021763) #24 Nsun3 (MGP_SPRETEiJ_G0021762) #26 Epha6 (MGP_SPRETEiJ_G0021761) Arl6 (MGP_SPRETEiJ_G0021760) MGP_SPRETEiJ_G0021759 Riox2 (MGP_SPRETEiJ_G0021758) Gabrr3 (MGP_SPRETEiJ_G0021757) Or5ac24 (MGP_SPRETEiJ_G0021756) Or5ac25 (MGP_SPRETEiJ_G0021755) MGP_SPRETEiJ_G0021754 MGP_SPRETEiJ_G0021753 Or5ac20 (MGP_SPRETEiJ_G0021752) MGP_SPRETEiJ_G0021751 Mouse MODERN SPECIES 7 Rbm11 (ENSMUSG00000032940) Lipi (ENSMUSG00000032948) Robo2 (ENSMUSG00000052516) Robo1 (ENSMUSG00000022883) Gbe1 (ENSMUSG00000022707) #12 Speer2 (ENSMUSG00000063163) Cadm2 (ENSMUSG00000064115) #13 Vgll3 (ENSMUSG00000091243) #14 Chmp2b (ENSMUSG00000004843) #15 Pou1f1 (ENSMUSG00000004842) #16 Htr1f (ENSMUSG00000050783) #17 Cggbp1 (ENSMUSG00000054604) #18 Zfp654 (ENSMUSG00000047141) #19 4930453N24Rik (ENSMUSG00000059920) #20 Csnka2ip (ENSMUSG00000068167) Epha3 (ENSMUSG00000052504) #22 Pros1 (ENSMUSG00000022912) #23 Stx19 (ENSMUSG00000047854) #25 Arl13b (ENSMUSG00000022911) #24 Nsun3 (ENSMUSG00000050312) #26 Epha6 (ENSMUSG00000055540) Arl6 (ENSMUSG00000022722) Crybg3 (ENSMUSG00000022723) Riox2 (ENSMUSG00000022724) Gabrr3 (ENSMUSG00000074991) Or5ac25 (ENSMUSG00000095706) Or5ac24 (ENSMUSG00000066257) Or5ac23 (ENSMUSG00000094422) Or5ac22 (ENSMUSG00000095928) Or5ac21 (ENSMUSG00000068182) Or5ac20 (ENSMUSG00000048810) Ryukyu mouse MODERN SPECIES 7 Rbm11 (MGP_CAROLIEiJ_G0020874) Lipi (MGP_CAROLIEiJ_G0020873) Robo2 (MGP_CAROLIEiJ_G0020872) Robo1 (MGP_CAROLIEiJ_G0020871) Gbe1 (MGP_CAROLIEiJ_G0020870) #12 MGP_CAROLIEiJ_G0020869 Cadm2 (MGP_CAROLIEiJ_G0020868) #13 Vgll3 (MGP_CAROLIEiJ_G0020867) #14 Chmp2b (MGP_CAROLIEiJ_G0020866) #15 Pou1f1 (MGP_CAROLIEiJ_G0020865) #16 Htr1f (MGP_CAROLIEiJ_G0020864) #17 Cggbp1 (MGP_CAROLIEiJ_G0020863) #18 MGP_CAROLIEiJ_G0020862 #19 4930453N24Rik (MGP_CAROLIEiJ_G0020861) #20 MGP_CAROLIEiJ_G0020860 Epha3 (MGP_CAROLIEiJ_G0020859) #22 Pros1 (MGP_CAROLIEiJ_G0020858) #23 Stx19 (MGP_CAROLIEiJ_G0020857) #25 Arl13b (MGP_CAROLIEiJ_G0020856) #24 Nsun3 (MGP_CAROLIEiJ_G0020855) #26 Epha6 (MGP_CAROLIEiJ_G0020854) Arl6 (MGP_CAROLIEiJ_G0020853) MGP_CAROLIEiJ_G0020852 Riox2 (MGP_CAROLIEiJ_G0020851) Gabrr3 (MGP_CAROLIEiJ_G0020850) Or5ac24 (MGP_CAROLIEiJ_G0020849) MGP_CAROLIEiJ_G0020848 MGP_CAROLIEiJ_G0020847 Or5ac16 (MGP_CAROLIEiJ_G0020846) Or5h26 (MGP_CAROLIEiJ_G0020845) Or5k3 (MGP_CAROLIEiJ_G0020844) Shrew mouse MODERN SPECIES 3 Hspa13 (MGP_PahariEiJ_G0016579) Rbm11 (MGP_PahariEiJ_G0016578) MGP_PahariEiJ_G0016577 Robo2 (MGP_PahariEiJ_G0016576) Robo1 (MGP_PahariEiJ_G0016575) Gbe1 (MGP_PahariEiJ_G0016574) #12 Cadm2 (MGP_PahariEiJ_G0016573) #13 Vgll3 (MGP_PahariEiJ_G0016572) #14 Chmp2b (MGP_PahariEiJ_G0016571) #15 Pou1f1 (MGP_PahariEiJ_G0016570) #16 Htr1f (MGP_PahariEiJ_G0016569) #17 Cggbp1 (MGP_PahariEiJ_G0016568) #18 MGP_PahariEiJ_G0016567 #19 4930453N24Rik (MGP_PahariEiJ_G0016566) #20 MGP_PahariEiJ_G0016565 Epha3 (MGP_PahariEiJ_G0016564) #22 Pros1 (MGP_PahariEiJ_G0016563) #23 Stx19 (MGP_PahariEiJ_G0016562) #25 Arl13b (MGP_PahariEiJ_G0016561) #24 Nsun3 (MGP_PahariEiJ_G0016560) #26 Epha6 (MGP_PahariEiJ_G0016559) MGP_PahariEiJ_G0016558 MGP_PahariEiJ_G0016557 Riox2 (MGP_PahariEiJ_G0016556) Gabrr3 (MGP_PahariEiJ_G0016555) Or5ac25 (MGP_PahariEiJ_G0016554) Or5ac24 (MGP_PahariEiJ_G0016553) MGP_PahariEiJ_G0016552 MGP_PahariEiJ_G0016551 MGP_PahariEiJ_G0016550 MGP_PahariEiJ_G0016548 Rat MODERN SPECIES 2 Gbe1 (ENSRNOG00000051232) #12 ENSRNOG00000062450 ENSRNOG00000064853 Cadm2 (ENSRNOG00000030840) #13 ENSRNOG00000069664 Vgll3 (ENSRNOG00000028774) #14 AABR07033047.1 (ENSRNOG00000050286) AABR07033045.1 (ENSRNOG00000000713) Chmp2b (ENSRNOG00000040257) #15 Pou1f1 (ENSRNOG00000000715) #16 Htr1f (ENSRNOG00000000716) #17 Cggbp1 (ENSRNOG00000000718) #18 Zfp654 (ENSRNOG00000029956) #19 C11h3orf38 (ENSRNOG00000000720) #20 Csnka2ip (ENSRNOG00000068003) Epha3 (ENSRNOG00000030285) #22 Pros1 (ENSRNOG00000048723) #23 Stx19 (ENSRNOG00000070368) #25 Arl13b (ENSRNOG00000047194) #24 Lesser Egyptian jerboa MODERN SPECIES 99 Rgs5 (ENSJJAG00000015242) Nuf2 (ENSJJAG00000015135) ENSJJAG00000017273 ENSJJAG00000018522 Cadm2 (ENSJJAG00000001556) #13 ENSJJAG00000011025 ENSJJAG00000001124 Vgll3 (ENSJJAG00000008774) #14 Chmp2b (ENSJJAG00000010165) #15 Pou1f1 (ENSJJAG00000011761) #16 Htr1f (ENSJJAG00000013994) #17 Zfp654 (ENSJJAG00000014040) #19 ENSJJAG00000015343 ENSJJAG00000016108 ENSJJAG00000022581 Epha3 (ENSJJAG00000023086) #22 Pros1 (ENSJJAG00000000094) #23 ENSJJAG00000010679 #24 Stx19 (ENSJJAG00000013942) #25 Nsun3 (ENSJJAG00000011783) #26 ENSJJAG00000013966 ENSJJAG00000012956 Arl6 (ENSJJAG00000014206) ENSJJAG00000014703 Riox2 (ENSJJAG00000017682) Gabrr3 (ENSJJAG00000018558) ENSJJAG00000010500 ENSJJAG00000014297 Or5h17 (ENSJJAG00000014061) ENSJJAG00000015091 ENSJJAG00000019450 Kangaroo rat MODERN SPECIES 392 Gbe1 (ENSDORG00000012473) #12 Cadm2 (ENSDORG00000001291) #13 ENSDORG00000025518 Vgll3 (ENSDORG00000012784) #14 Chmp2b (ENSDORG00000016032) #15 Pou1f1 (ENSDORG00000016030) #16 Htr1f (ENSDORG00000009973) #17 Cggbp1 (ENSDORG00000024826) #18 Zfp654 (ENSDORG00000010609) #19 4930453N24Rik (ENSDORG00000023462) #20 Epha3 (ENSDORG00000003956) #22 Pros1 (ENSDORG00000023647) #23 Arl13b (ENSDORG00000006144) #24 Stx19 (ENSDORG00000024286) #25 ENSDORG00000028021 ENSDORG00000028388 ENSDORG00000009251 ENSDORG00000023722 Arl6 (ENSDORG00000009252) ENSDORG00000026198 Riox2 (ENSDORG00000006620) Gabrr3 (ENSDORG00000006621) ENSDORG00000025384 ENSDORG00000011655 Gpr15 (ENSDORG00000004342) Cpox (ENSDORG00000014882) Rodentia_A ANCESTRAL SPECIES 5 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.a.b.h ENSGT01090000260017.c.b.a.b.a.b.g ENSGT01090000260017.c.b.a.a.k.a.b ENSGT01090000260017.c.b.a.a.k.b.a ENSGT01090000260017.c.b.a.a.k.a.a.b Sciuridae ANCESTRAL SPECIES 12 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.a.b.h.a ENSGT01090000260017.c.b.a.b.a.b.h.b ENSGT01090000260017.c.b.a.b.a.b.g ENSGT01090000260017.c.b.a.a.k.a.b ENSGT01090000260017.c.b.a.a.k.b.a Marmotini ANCESTRAL SPECIES 13 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000154531.ab ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.a.b.h.a ENSGT01090000260017.c.b.a.b.a.b.h.b ENSGT01090000260017.c.b.a.b.a.b.g ENSGT01090000260017.c.b.a.a.k.a.b ENSGT01090000260017.c.b.a.a.k.b.a Marmotini_b ANCESTRAL SPECIES 237 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000154531.ab ENSGT00940000157088 #22 Arctic ground squirrel MODERN SPECIES 130 CADM2 (ENSUPAG00010021780) #13 VGLL3 (ENSUPAG00010021778) #14 CHMP2B (ENSUPAG00010021776) #15 POU1F1 (ENSUPAG00010021765) #16 HTR1F (ENSUPAG00010021762) #17 ENSUPAG00010021761 #18 ZNF654 (ENSUPAG00010021757) #19 C3orf38 (ENSUPAG00010021754) #20 ENSUPAG00010021753 ENSUPAG00010021752 EPHA3 (ENSUPAG00010021738) #22 Squirrel MODERN SPECIES 210 CADM2 (ENSSTOG00000013608) #13 VGLL3 (ENSSTOG00000009434) #14 CHMP2B (ENSSTOG00000011456) #15 POU1F1 (ENSSTOG00000011463) #16 HTR1F (ENSSTOG00000003728) #17 CGGBP1 (ENSSTOG00000027013) #18 ZNF654 (ENSSTOG00000024555) #19 C3orf38 (ENSSTOG00000014875) #20 ENSSTOG00000034915 EPHA3 (ENSSTOG00000014898) #22 Alpin marmot MODERN SPECIES 4 ROBO2 (ENSMMMG00000016742) ROBO1 (ENSMMMG00000016683) GBE1 (ENSMMMG00000016601) #12 ENSMMMG00000016590 CADM2 (ENSMMMG00000016461) #13 ENSMMMG00000016452 VGLL3 (ENSMMMG00000016444) #14 CHMP2B (ENSMMMG00000016432) #15 POU1F1 (ENSMMMG00000016382) #16 HTR1F (ENSMMMG00000016369) #17 CGGBP1 (ENSMMMG00000016367) #18 ZNF654 (ENSMMMG00000016352) #19 C3orf38 (ENSMMMG00000016338) #20 ENSMMMG00000016331 ENSMMMG00000016329 EPHA3 (ENSMMMG00000016294) #22 ENSMMMG00000016279 PROS1 (ENSMMMG00000016259) #23 STX19 (ENSMMMG00000016256) #25 ARL13B (ENSMMMG00000016230) #24 ENSMMMG00000016190 EPHA6 (ENSMMMG00000016032) ARL6 (ENSMMMG00000015952) ENSMMMG00000015934 RIOX2 (ENSMMMG00000015909) GABRR3 (ENSMMMG00000015898) ENSMMMG00000015892 ENSMMMG00000015888 ENSMMMG00000015884 ENSMMMG00000015864 ENSMMMG00000015859 Eurasian red squirrel MODERN SPECIES 1 ROBO1 (ENSSVLG00005018820) ENSSVLG00005019248 GBE1 (ENSSVLG00005019519) #12 ENSSVLG00005019648 ENSSVLG00005019667 CADM2 (ENSSVLG00005011324) #13 VGLL3 (ENSSVLG00005011630) #14 ENSSVLG00005011686 #15 POU1F1 (ENSSVLG00005011862) #16 ENSSVLG00005012054 HTR1F (ENSSVLG00005012072) #17 ENSSVLG00005012096 #18 ZNF654 (ENSSVLG00005012126) #19 ENSSVLG00005012217 #20 ENSSVLG00005012271 EPHA3 (ENSSVLG00005012314) #22 ENSSVLG00005012746 PROS1 (ENSSVLG00005012814) #23 ARL13B (ENSSVLG00005012937) #24 ENSSVLG00005013029 #25 NSUN3 (ENSSVLG00005013136) #26 ENSSVLG00005013214 ENSSVLG00005013290 ENSSVLG00005013345 ENSSVLG00005013423 ENSSVLG00005013472 ENSSVLG00005013503 EPHA6 (ENSSVLG00005013877) ARL6 (ENSSVLG00005014235) CRYBG3 (ENSSVLG00005014314) ENSSVLG00005014532 Hystricomorpha ANCESTRAL SPECIES 18 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.k.a.b ENSGT01090000260017.c.b.a.a.k.b.a ENSGT01090000260017.c.b.a.a.k.a.a.b.d ENSGT01090000260017.c.b.a.a.k.a.a.b.c ENSGT01090000260017.c.b.b.c.a ENSGT01090000260017.c.b.b.d Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 Hystricomorpha_b ANCESTRAL SPECIES 34 ENSGT00940000157806 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 Long-tailed chinchilla MODERN SPECIES 114 HSPA13 (ENSCLAG00000005707) RBM11 (ENSCLAG00000005374) LIPI (ENSCLAG00000005197) ROBO2 (ENSCLAG00000004623) ENSCLAG00000009848 ROBO1 (ENSCLAG00000015477) GBE1 (ENSCLAG00000005860) #12 CADM2 (ENSCLAG00000004950) #13 VGLL3 (ENSCLAG00000004309) #14 CHMP2B (ENSCLAG00000004251) #15 POU1F1 (ENSCLAG00000008895) #16 HTR1F (ENSCLAG00000008847) #17 ENSCLAG00000010225 #18 ZNF654 (ENSCLAG00000009137) #19 C3orf38 (ENSCLAG00000008911) #20 EPHA3 (ENSCLAG00000008216) #22 ENSCLAG00000007467 PROS1 (ENSCLAG00000006656) #23 ARL13B (ENSCLAG00000006379) #24 STX19 (ENSCLAG00000005443) #25 NSUN3 (ENSCLAG00000004168) #26 ENSCLAG00000007975 EPHA6 (ENSCLAG00000012297) ARL6 (ENSCLAG00000011788) CRYBG3 (ENSCLAG00000007113) RIOX2 (ENSCLAG00000006223) GABRR3 (ENSCLAG00000006076) Degu MODERN SPECIES 107 ENSODEG00000010452 METTL18 (ENSODEG00000011388) ENSODEG00000011249 SCYL3 (ENSODEG00000011505) ENSODEG00000013130 #12 ENSODEG00000011891 CADM2 (ENSODEG00000011473) #13 VGLL3 (ENSODEG00000011694) #14 ENSODEG00000011212 #15 POU1F1 (ENSODEG00000012134) #16 ENSODEG00000020112 HTR1F (ENSODEG00000019966) #17 ZNF654 (ENSODEG00000012225) #19 C3orf38 (ENSODEG00000015138) #20 ENSODEG00000014399 EPHA3 (ENSODEG00000014135) #22 PROS1 (ENSODEG00000012245) #23 STX19 (ENSODEG00000019968) #25 ARL13B (ENSODEG00000011381) #24 NSUN3 (ENSODEG00000010462) #26 Guinea pig MODERN SPECIES 34 SAMSN1 (ENSCPOG00000006019) HSPA13 (ENSCPOG00000007860) RBM11 (ENSCPOG00000005309) LIPI (ENSCPOG00000039776) ROBO2 (ENSCPOG00000012716) ROBO1 (ENSCPOG00000010039) GBE1 (ENSCPOG00000006294) #12 CADM2 (ENSCPOG00000009902) #13 VGLL3 (ENSCPOG00000024214) #14 CHMP2B (ENSCPOG00000038857) #15 POU1F1 (ENSCPOG00000006596) #16 CGGBP1 (ENSCPOG00000033764) #18 ZNF654 (ENSCPOG00000013512) #19 C3orf38 (ENSCPOG00000007963) #20 ENSCPOG00000023944 EPHA3 (ENSCPOG00000004938) #22 PROS1 (ENSCPOG00000000725) #23 ARL13B (ENSCPOG00000002558) #24 STX19 (ENSCPOG00000002561) #25 NSUN3 (ENSCPOG00000034439) #26 ENSCPOG00000034571 ENSCPOG00000026024 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000037292 VGLL3 (ENSHGLG00000000912) #14 ENSHGLG00000050433 CHMP2B (ENSHGLG00000000954) #15 POU1F1 (ENSHGLG00000001001) #16 ENSHGLG00000032647 ENSHGLG00000047444 ENSHGLG00000001380 ENSHGLG00000032052 ENSHGLG00000042763 #17 CGGBP1 (ENSHGLG00000034659) #18 ZNF654 (ENSHGLG00000001844) #19 ENSHGLG00000037445 C3orf38 (ENSHGLG00000002435) #20 ENSHGLG00000041404 EPHA3 (ENSHGLG00000003586) #22 ENSHGLG00000038748 PROS1 (ENSHGLG00000042539) #23 ENSHGLG00000047498 STX19 (ENSHGLG00000047716) #25 ARL13B (ENSHGLG00000003881) #24 ENSHGLG00000043587 NSUN3 (ENSHGLG00000006224) #26 ENSHGLG00000045668 ENSHGLG00000047628 EPHA6 (ENSHGLG00000012887) ARL6 (ENSHGLG00000048582) CRYBG3 (ENSHGLG00000001387) ENSHGLG00000034916 MINA (ENSHGLG00000003242) ENSHGLG00000045303 Lagomorpha ANCESTRAL SPECIES 9 ENSGT00940000157962 ENSGT00390000007999 ENSGT00490000044737 ENSGT00940000157806 ENSGT00890000139503 ENSGT00940000162802 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.r ENSGT01090000260017.c.b.a.b.b.q ENSGT01090000260017.c.b.a.a ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.c.a ENSGT01090000260017.c.b.b.d.s Rabbit MODERN SPECIES 5 ENSOCUG00000022949 ENSOCUG00000037817 CADM2 (ENSOCUG00000001739) #13 ENSOCUG00000038220 VGLL3 (ENSOCUG00000020895) #14 CHMP2B (ENSOCUG00000003985) #15 POU1F1 (ENSOCUG00000017779) #16 HTR1F (ENSOCUG00000027917) #17 ENSOCUG00000025046 ENSOCUG00000007037 ZNF654 (ENSOCUG00000004967) #19 C3orf38 (ENSOCUG00000014034) #20 ENSOCUG00000031707 ENSOCUG00000026380 ENSOCUG00000024255 EPHA3 (ENSOCUG00000010465) #22 PROS1 (ENSOCUG00000025358) #23 STX19 (ENSOCUG00000001785) #25 ARL13B (ENSOCUG00000025555) #24 NSUN3 (ENSOCUG00000011677) #26 ENSOCUG00000013576 ENSOCUG00000037233 ENSOCUG00000036085 ENSOCUG00000035896 ENSOCUG00000037792 EPHA6 (ENSOCUG00000029519) ARL6 (ENSOCUG00000029293) CRYBG3 (ENSOCUG00000012874) RIOX2 (ENSOCUG00000010223) GABRR3 (ENSOCUG00000005850) ENSOCUG00000035864 Pika MODERN SPECIES 734 EPHA3 (ENSOPRG00000005628) #22 Tree shrew MODERN SPECIES 1201 EPHA3 (ENSTBEG00000011301) #22 Primates ANCESTRAL SPECIES 1 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.b.c.b Haplorrhini DUPLICATION Haplorrhini DUPLICATION Haplorrhini ANCESTRAL SPECIES ENSGT00940000157088.q.a #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000157088.q.a #22 Platyrrhini ANCESTRAL SPECIES 31 ENSGT00890000139503 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.q.a #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 Mas night monkey MODERN SPECIES 1196 ENSANAG00000026534 #22 ENSANAG00000031450 PROS1 (ENSANAG00000034049) #23 STX19 (ENSANAG00000031460) #25 ARL13B (ENSANAG00000033604) #24 NSUN3 (ENSANAG00000029787) #26 Cebidae ANCESTRAL SPECIES 32 ENSGT00890000139503 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.q.a #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 Marmoset MODERN SPECIES 13 GBE1 (ENSCJAG00000000191) #12 ENSCJAG00000075727 ENSCJAG00000076865 CADM2 (ENSCJAG00000008885) #13 ENSCJAG00000080536 VGLL3 (ENSCJAG00000042898) #14 CHMP2B (ENSCJAG00000008842) #15 POU1F1 (ENSCJAG00000008810) #16 ENSCJAG00000022621 ENSCJAG00000075479 CGGBP1 (ENSCJAG00000046292) #18 ZNF654 (ENSCJAG00000045391) #19 C3orf38 (ENSCJAG00000008780) #20 ENSCJAG00000067693 ENSCJAG00000058748 EPHA3 (ENSCJAG00000008692) #22 PROS1 (ENSCJAG00000008648) #23 STX19 (ENSCJAG00000065164) #25 ARL13B (ENSCJAG00000008622) #24 NSUN3 (ENSCJAG00000008606) #26 ENSCJAG00000078682 EPHA6 (ENSCJAG00000008553) ARL6 (ENSCJAG00000074830) ENSCJAG00000083114 CRYBG3 (ENSCJAG00000008539) RIOX2 (ENSCJAG00000043760) GABRR3 (ENSCJAG00000008491) Cebidae_a ANCESTRAL SPECIES 29 ENSGT00890000139503 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.q.a #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 Bolivian squirrel monkey MODERN SPECIES 71 ROBO1 (ENSSBOG00000028513) GBE1 (ENSSBOG00000021136) #12 CADM2 (ENSSBOG00000020426) #13 ENSSBOG00000002165 ENSSBOG00000034560 VGLL3 (ENSSBOG00000033718) #14 CHMP2B (ENSSBOG00000027652) #15 POU1F1 (ENSSBOG00000028765) #16 HTR1F (ENSSBOG00000011789) #17 CGGBP1 (ENSSBOG00000016247) #18 ZNF654 (ENSSBOG00000018458) #19 C3orf38 (ENSSBOG00000031553) #20 EPHA3 (ENSSBOG00000035210) #22 PROS1 (ENSSBOG00000034702) #23 ARL13B (ENSSBOG00000028083) #24 NSUN3 (ENSSBOG00000029999) #26 ENSSBOG00000031875 ENSSBOG00000017639 ENSSBOG00000019683 EPHA6 (ENSSBOG00000028512) ARL6 (ENSSBOG00000031045) CRYBG3 (ENSSBOG00000023182) RIOX2 (ENSSBOG00000035025) GABRR3 (ENSSBOG00000034776) ENSSBOG00000022258 ENSSBOG00000014685 ENSSBOG00000024216 POLR3K (ENSSBOG00000013108) Capuchin MODERN SPECIES 671 ENSCCAG00000023664 #22 ENSCCAG00000020971 Haplorrhini ANCESTRAL SPECIES ENSGT00940000157088.q.b #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000157088.q.b #22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000157088.q.b #22 Mas night monkey MODERN SPECIES 1164 ENSANAG00000025734 CADM2 (ENSANAG00000034873) #13 ENSANAG00000018801 ENSANAG00000034702 VGLL3 (ENSANAG00000020110) #14 CHMP2B (ENSANAG00000023335) #15 POU1F1 (ENSANAG00000023264) #16 ENSANAG00000031907 ENSANAG00000023678 ENSANAG00000021304 HTR1F (ENSANAG00000011289) #17 CGGBP1 (ENSANAG00000031705) #18 ZNF654 (ENSANAG00000021758) #19 C3orf38 (ENSANAG00000025870) #20 ENSANAG00000028393 #22 Cebidae ANCESTRAL SPECIES ENSGT00940000157088.q.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000157088.q.b #22 Capuchin MODERN SPECIES 168 CADM2 (ENSCCAG00000023122) #13 VGLL3 (ENSCCAG00000029126) #14 CHMP2B (ENSCCAG00000019581) #15 POU1F1 (ENSCCAG00000027193) #16 ENSCCAG00000008935 ENSCCAG00000001323 HTR1F (ENSCCAG00000003234) #17 CGGBP1 (ENSCCAG00000032149) #18 ZNF654 (ENSCCAG00000012733) #19 C3orf38 (ENSCCAG00000027482) #20 ENSCCAG00000031735 ENSCCAG00000026260 ENSCCAG00000022181 ENSCCAG00000023786 #22 Tarsier MODERN SPECIES 3525 ENSTSYG00000028131 #22 Haplorrhini ANCESTRAL SPECIES 22 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.c.a.i ENSGT01090000260017.c.b.b.d Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.c.a.i Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000154477.h.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.a.a.e.c Hominoidea ANCESTRAL SPECIES 2 ENSGT00390000017955.c.s.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000156365 #24 ENSGT00910000148001 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f Hominidae ANCESTRAL SPECIES 2 ENSGT00390000017955.c.s.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b.qd #23 ENSGT00940000156365 #24 ENSGT00910000148001 ENSGT00940000154035.b.pd #23 ENSGT01050000244948.c.a #25 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00390000017955.c.s.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00930000151026.e.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00390000003428.x ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b.pd #23 ENSGT00940000154035.b.qd #23 ENSGT00940000156365 #24 ENSGT00910000148001 ENSGT01050000244948.c.a #25 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a.a ENSGT01090000260017.c.b.a.a.e.d.b.a Gorilla MODERN SPECIES 16 ENSGGOG00000027306 ROBO1 (ENSGGOG00000001449) GBE1 (ENSGGOG00000026805) #12 ENSGGOG00000042856 CADM2 (ENSGGOG00000026417) #13 VGLL3 (ENSGGOG00000009492) #14 ENSGGOG00000039835 CHMP2B (ENSGGOG00000024679) #15 POU1F1 (ENSGGOG00000011966) #16 HTR1F (ENSGGOG00000025641) #17 CGGBP1 (ENSGGOG00000044102) #18 ZNF654 (ENSGGOG00000000500) #19 C3orf38 (ENSGGOG00000000075) #20 ENSGGOG00000041021 CSNKA2IP (ENSGGOG00000036585) EPHA3 (ENSGGOG00000014939) #22 ENSGGOG00000027328 #23 PROS1 (ENSGGOG00000009491) #23 ARL13B (ENSGGOG00000003567) #24 STX19 (ENSGGOG00000008847) #25 NSUN3 (ENSGGOG00000013264) #26 ENSGGOG00000036766 ENSGGOG00000040838 ENSGGOG00000037776 ENSGGOG00000042543 ENSGGOG00000025402 EPHA6 (ENSGGOG00000034920) ARL6 (ENSGGOG00000005474) CRYBG3 (ENSGGOG00000027377) RIOX2 (ENSGGOG00000016225) GABRR3 (ENSGGOG00000011828) Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00390000017955.c.s.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00930000151026.e.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00390000003428.x ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b.pd #23 ENSGT00940000154035.b.qd #23 ENSGT00940000156365 #24 ENSGT00910000148001 ENSGT01050000244948.c.a #25 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a.a ENSGT01090000260017.c.b.a.a.e.d.b.a Human MODERN SPECIES 15 FRG2C (ENSG00000172969) ZNF717 (ENSG00000227124) ROBO2 (ENSG00000185008) ROBO1 (ENSG00000169855) GBE1 (ENSG00000114480) #12 CADM2 (ENSG00000175161) #13 VGLL3 (ENSG00000206538) #14 CHMP2B (ENSG00000083937) #15 POU1F1 (ENSG00000064835) #16 HTR1F (ENSG00000179097) #17 CGGBP1 (ENSG00000163320) #18 ENSG00000288654 ZNF654 (ENSG00000175105) #19 C3orf38 (ENSG00000179021) #20 CSNKA2IP (ENSG00000283434) EPHA3 (ENSG00000044524) #22 PROS1 (ENSG00000184500) #23 ARL13B (ENSG00000169379) #24 STX19 (ENSG00000178750) #25 DHFR2 (ENSG00000178700) NSUN3 (ENSG00000178694) #26 EPHA6 (ENSG00000080224) ARL6 (ENSG00000113966) CRYBG3 (ENSG00000080200) RIOX2 (ENSG00000170854) GABRR3 (ENSG00000183185) OR5AC1 (ENSG00000213439) OR5AC2 (ENSG00000196578) OR5H1 (ENSG00000231192) OR5H14 (ENSG00000236032) OR5H15 (ENSG00000233412) Pan ANCESTRAL SPECIES 2 ENSGT00390000017955.c.s.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00930000151026.e.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00390000003428.x ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b.pd #23 ENSGT00940000154035.b.qd #23 ENSGT00940000156365 #24 ENSGT00910000148001 ENSGT01050000244948.c.a #25 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00390000000805.k.b ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.d.a.a Chimpanzee MODERN SPECIES 16 ENSPTRG00000051774 ENSPTRG00000046576 CADM2 (ENSPTRG00000045795) #13 ENSPTRG00000043858 ENSPTRG00000041165 VGLL3 (ENSPTRG00000047510) #14 ENSPTRG00000051705 CHMP2B (ENSPTRG00000015122) #15 POU1F1 (ENSPTRG00000015123) #16 ENSPTRG00000039491 HTR1F (ENSPTRG00000015124) #17 CGGBP1 (ENSPTRG00000052846) #18 ZNF654 (ENSPTRG00000030181) #19 C3H3orf38 (ENSPTRG00000015126) #20 CSNKA2IP (ENSPTRG00000048346) EPHA3 (ENSPTRG00000015127) #22 ENSPTRG00000046714 ENSPTRG00000047877 #23 PROS1 (ENSPTRG00000015128) #23 ARL13B (ENSPTRG00000015129) #24 STX19 (ENSPTRG00000015130) #25 DHFR2 (ENSPTRG00000051799) NSUN3 (ENSPTRG00000015132) #26 ENSPTRG00000043223 ENSPTRG00000021061 ENSPTRG00000048407 EPHA6 (ENSPTRG00000015134) ARL6 (ENSPTRG00000015139) CRYBG3 (ENSPTRG00000039227) RIOX2 (ENSPTRG00000015142) GABRR3 (ENSPTRG00000046349) Bonobo MODERN SPECIES 16 ROBO1 (ENSPPAG00000035480) GBE1 (ENSPPAG00000041824) #12 ENSPPAG00000039117 CADM2 (ENSPPAG00000030715) #13 VGLL3 (ENSPPAG00000043121) #14 ENSPPAG00000027343 CHMP2B (ENSPPAG00000031884) #15 POU1F1 (ENSPPAG00000038153) #16 ENSPPAG00000034068 HTR1F (ENSPPAG00000008187) #17 ZNF654 (ENSPPAG00000022034) #19 C3orf38 (ENSPPAG00000036241) #20 ENSPPAG00000042785 CSNKA2IP (ENSPPAG00000042933) ENSPPAG00000043857 EPHA3 (ENSPPAG00000032410) #22 ENSPPAG00000037320 ENSPPAG00000033569 #23 PROS1 (ENSPPAG00000027232) #23 ARL13B (ENSPPAG00000023593) #24 ENSPPAG00000016915 STX19 (ENSPPAG00000011542) #25 NSUN3 (ENSPPAG00000029174) #26 ENSPPAG00000038069 ENSPPAG00000031997 ENSPPAG00000041042 ENSPPAG00000000615 ENSPPAG00000037809 EPHA6 (ENSPPAG00000018343) ARL6 (ENSPPAG00000043743) CRYBG3 (ENSPPAG00000040131) Orangutan MODERN SPECIES 16 FILIP1L (ENSPPYG00000013607) COL8A1 (ENSPPYG00000037085) ROBO2 (ENSPPYG00000013633) ROBO1 (ENSPPYG00000013634) ENSPPYG00000037849 GBE1 (ENSPPYG00000025891) #12 CADM2 (ENSPPYG00000013635) #13 ENSPPYG00000013636 VGLL3 (ENSPPYG00000013637) #14 CHMP2B (ENSPPYG00000013639) #15 POU1F1 (ENSPPYG00000013640) #16 CGGBP1 (ENSPPYG00000031975) #18 ZNF654 (ENSPPYG00000013643) #19 C3orf38 (ENSPPYG00000013644) #20 CSNKA2IP (ENSPPYG00000034142) EPHA3 (ENSPPYG00000013646) #22 MKRN2OS (ENSPPYG00000039535) TSEN2 (ENSPPYG00000013647) PPARG (ENSPPYG00000013648) SYN2 (ENSPPYG00000013649) TIMP4 (ENSPPYG00000030141) ENSPPYG00000013651 VGLL4 (ENSPPYG00000013652) ATG7 (ENSPPYG00000041433) HRH1 (ENSPPYG00000013653) SLC6A1 (ENSPPYG00000013655) SLC6A11 (ENSPPYG00000013656) ATP2B2 (ENSPPYG00000013657) SEC13 (ENSPPYG00000013658) GHRL (ENSPPYG00000013659) TATDN2 (ENSPPYG00000013661) Gibbon MODERN SPECIES 13 ENSNLEG00000032065 ENSNLEG00000011888 ROBO1 (ENSNLEG00000011861) GBE1 (ENSNLEG00000011827) #12 ENSNLEG00000029461 CADM2 (ENSNLEG00000033517) #13 VGLL3 (ENSNLEG00000011790) #14 ENSNLEG00000028318 CHMP2B (ENSNLEG00000027188) #15 POU1F1 (ENSNLEG00000011761) #16 ENSNLEG00000033668 HTR1F (ENSNLEG00000018632) #17 ZNF654 (ENSNLEG00000011749) #19 C3orf38 (ENSNLEG00000011744) #20 ENSNLEG00000034037 EPHA3 (ENSNLEG00000011707) #22 PROS1 (ENSNLEG00000001695) #23 STX19 (ENSNLEG00000001932) #25 ARL13B (ENSNLEG00000001772) #24 ENSNLEG00000031524 NSUN3 (ENSNLEG00000028997) #26 ENSNLEG00000031526 ENSNLEG00000031075 ENSNLEG00000033949 ENSNLEG00000030210 EPHA6 (ENSNLEG00000001969) ARL6 (ENSNLEG00000027577) CRYBG3 (ENSNLEG00000002034) RIOX2 (ENSNLEG00000002054) GABRR3 (ENSNLEG00000002140) ENSNLEG00000035793 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000154477.h.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00630000089910.ib.b.b ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.b.c.a.i ENSGT01090000260017.c.b.b.d.e Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000154477.h.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.r #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.b.c.a.i ENSGT01090000260017.c.b.b.d.e Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000155366.a.w.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.r #22 ENSGT00730000111097.f.a.b.a.a.a ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.r #22 ENSGT00730000111097.f.a.b.a.a.a ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f Cercopithecinae_d ANCESTRAL SPECIES 140 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00910000148050 ENSGT00940000157088.r #22 ENSGT00730000111097.f.a.b.a.a.a ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.a.a.e.c ENSGT00940000154530.r.b.a.a.a Sooty mangabey MODERN SPECIES 620 CADM2 (ENSCATG00000036410) #13 VGLL3 (ENSCATG00000029921) #14 CHMP2B (ENSCATG00000043825) #15 POU1F1 (ENSCATG00000033860) #16 HTR1F (ENSCATG00000018755) #17 ENSCATG00000032374 ZNF654 (ENSCATG00000037345) #19 C3orf38 (ENSCATG00000041683) #20 ENSCATG00000029354 ENSCATG00000031209 ENSCATG00000041362 EPHA3 (ENSCATG00000036316) #22 PROS1 (ENSCATG00000035148) #23 STX19 (ENSCATG00000028840) #25 ARL13B (ENSCATG00000009050) #24 ENSCATG00000037229 NSUN3 (ENSCATG00000032928) #26 EPHA6 (ENSCATG00000015323) ARL6 (ENSCATG00000031356) CRYBG3 (ENSCATG00000032391) RIOX2 (ENSCATG00000036355) GABRR3 (ENSCATG00000041792) ENSCATG00000031527 OR5H6 (ENSCATG00000029663) OR5H2 (ENSCATG00000023753) OR5H8 (ENSCATG00000033545) ENSCATG00000022409 Drill MODERN SPECIES 643 HTR1F (ENSMLEG00000028052) #17 ZNF654 (ENSMLEG00000034170) #19 C3orf38 (ENSMLEG00000027488) #20 ENSMLEG00000030205 EPHA3 (ENSMLEG00000040711) #22 ENSMLEG00000027777 PROS1 (ENSMLEG00000032716) #23 ARL13B (ENSMLEG00000038191) #24 STX19 (ENSMLEG00000020260) #25 NSUN3 (ENSMLEG00000039542) #26 ENSMLEG00000029421 ENSMLEG00000014203 Olive baboon MODERN SPECIES 11 ROBO2 (ENSPANG00000016829) ROBO1 (ENSPANG00000013370) GBE1 (ENSPANG00000012561) #12 CADM2 (ENSPANG00000006775) #13 VGLL3 (ENSPANG00000014750) #14 CHMP2B (ENSPANG00000001270) #15 POU1F1 (ENSPANG00000001271) #16 ENSPANG00000049203 ENSPANG00000019784 ENSPANG00000012560 #18 ZNF654 (ENSPANG00000017486) #19 C3orf38 (ENSPANG00000024996) #20 EPHA3 (ENSPANG00000025220) #22 ENSPANG00000049414 PROS1 (ENSPANG00000008519) #23 ARL13B (ENSPANG00000018309) #24 STX19 (ENSPANG00000007239) #25 DHFR2 (ENSPANG00000023705) NSUN3 (ENSPANG00000014749) #26 ENSPANG00000039441 ENSPANG00000046660 EPHA6 (ENSPANG00000010320) ENSPANG00000007310 ARL6 (ENSPANG00000007238) CRYBG3 (ENSPANG00000019144) RIOX2 (ENSPANG00000009187) GABRR3 (ENSPANG00000018919) ENSPANG00000040236 Macaca ANCESTRAL SPECIES 5 ENSGT00940000155366.a.w.b ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088.r #22 ENSGT00730000111097.f.a.b.a.a.a ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00910000148001 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00400000022973.a.b.a ENSGT00950000183087.A.a.b.b.g.f.d ENSGT00390000017040 #12 ENSGT00980000202068.a.a.b.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT01100000263577.a.a.b.a.b.a.a.a.b.a ENSGT00390000012239 ENSGT00940000157088.r #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00390000010283.`b.b ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.d.a ENSGT01090000260017.c.b.a.a.e.d.b.a ENSGT01090000260017.c.b.a.a.e.d.b.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.a.a.e.c Rhesus MODERN SPECIES 11 ENSMMUG00000064882 ENSMMUG00000049913 GBE1 (ENSMMUG00000015877) #12 ENSMMUG00000057275 ENSMMUG00000049535 CADM2 (ENSMMUG00000000583) #13 VGLL3 (ENSMMUG00000000519) #14 CHMP2B (ENSMMUG00000016246) #15 POU1F1 (ENSMMUG00000016244) #16 HTR1F (ENSMMUG00000054402) CGGBP1 (ENSMMUG00000047994) #18 ZNF654 (ENSMMUG00000043727) #19 C2H3orf38 (ENSMMUG00000021507) #20 ENSMMUG00000049786 CSNKA2IP (ENSMMUG00000045282) EPHA3 (ENSMMUG00000008242) #22 ENSMMUG00000058321 PROS1 (ENSMMUG00000020334) #23 STX19 (ENSMMUG00000045475) #25 ARL13B (ENSMMUG00000020335) #24 ENSMMUG00000055230 DHFR2 (ENSMMUG00000057255) ENSMMUG00000050792 NSUN3 (ENSMMUG00000020337) #26 ENSMMUG00000012920 EPHA6 (ENSMMUG00000023330) ARL6 (ENSMMUG00000038349) RIOX2 (ENSMMUG00000017872) ENSMMUG00000058449 GABRR3 (ENSMMUG00000005977) ENSMMUG00000064254 Crab-eating macaque MODERN SPECIES 11 ENSMFAG00000052399 ENSMFAG00000050404 CADM2 (ENSMFAG00000002627) #13 VGLL3 (ENSMFAG00000003253) #14 CHMP2B (ENSMFAG00000033665) #15 POU1F1 (ENSMFAG00000031190) #16 ENSMFAG00000055407 ENSMFAG00000033818 ENSMFAG00000065497 ZNF654 (ENSMFAG00000041264) #19 CGGBP1 (ENSMFAG00000052960) #18 C3orf38 (ENSMFAG00000045545) #20 ENSMFAG00000050699 CSNKA2IP (ENSMFAG00000053253) ENSMFAG00000046323 EPHA3 (ENSMFAG00000031166) #22 PROS1 (ENSMFAG00000043290) #23 STX19 (ENSMFAG00000007249) #25 ARL13B (ENSMFAG00000044585) #24 DHFR2 (ENSMFAG00000054542) ENSMFAG00000040015 NSUN3 (ENSMFAG00000037638) #26 EPHA6 (ENSMFAG00000000192) ARL6 (ENSMFAG00000035901) CRYBG3 (ENSMFAG00000046104) RIOX2 (ENSMFAG00000041662) ENSMFAG00000053932 GABRR3 (ENSMFAG00000029970) ENSMFAG00000047351 OR5H14 (ENSMFAG00000053144) OR5H6 (ENSMFAG00000053901) Pig-tailed macaque MODERN SPECIES 545 HTR1F (ENSMNEG00000001964) #17 ZNF654 (ENSMNEG00000030504) #19 C3orf38 (ENSMNEG00000043791) #20 EPHA3 (ENSMNEG00000036058) #22 ENSMNEG00000044283 PROS1 (ENSMNEG00000039512) #23 ARL13B (ENSMNEG00000033653) #24 ENSMNEG00000035986 STX19 (ENSMNEG00000042939) #25 ENSMNEG00000002221 NSUN3 (ENSMNEG00000028804) #26 ENSMNEG00000008849 ENSMNEG00000037242 EPHA6 (ENSMNEG00000032163) ARL6 (ENSMNEG00000032712) CRYBG3 (ENSMNEG00000043832) RIOX2 (ENSMNEG00000044647) GABRR3 (ENSMNEG00000031878) ENSMNEG00000045134 Vervet Monkey MODERN SPECIES 14 ENSCSAG00000005858 ROBO2 (ENSCSAG00000005865) ENSCSAG00000005886 ENSCSAG00000005899 GBE1 (ENSCSAG00000005907) #12 ENSCSAG00000018731 CADM2 (ENSCSAG00000005916) #13 VGLL3 (ENSCSAG00000005920) #14 CHMP2B (ENSCSAG00000005923) #15 POU1F1 (ENSCSAG00000005925) #16 ENSCSAG00000018730 CGGBP1 (ENSCSAG00000018729) #18 ZNF654 (ENSCSAG00000005929) #19 C3orf38 (ENSCSAG00000005931) #20 EPHA3 (ENSCSAG00000005935) #22 PROS1 (ENSCSAG00000005942) #23 STX19 (ENSCSAG00000005944) #25 ARL13B (ENSCSAG00000005948) #24 NSUN3 (ENSCSAG00000005953) #26 ENSCSAG00000018728 ENSCSAG00000018727 ENSCSAG00000005955 ENSCSAG00000005960 ARL6 (ENSCSAG00000005966) CRYBG3 (ENSCSAG00000005974) RIOX2 (ENSCSAG00000005980) GABRR3 (ENSCSAG00000005987) ENSCSAG00000018726 OR5H2 (ENSCSAG00000018725) OR5K3 (ENSCSAG00000005992) Rhinopithecus ANCESTRAL SPECIES 964 ENSGT00730000111097.f.a.b.a.a.a ENSGT00940000157088.r #22 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 233 ENSRBIG00000041100 ENSRBIG00000002220 #22 Black snub-nosed monkey MODERN SPECIES 789 ENSRBIG00000041916 #22 SCYGR8 (ENSRBIG00000033609) CCL20 (ENSRBIG00000027912) Golden snub-nosed monkey MODERN SPECIES 2327 ENSRROG00000000111 EPHA3 (ENSRROG00000042385) #22 Tarsier MODERN SPECIES 4247 ENSTSYG00000002407 #22 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B.c #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.a.e.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.a.b.a ENSGT01090000260017.c.b.a.a.e.a.a Lemuriformes ANCESTRAL SPECIES 9 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B.c #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.a.b.a.a.b ENSGT01090000260017.c.b.a.a.e.a.a.a.b ENSGT01090000260017.c.b.a.a.f Mouse lemur MODERN SPECIES 24 ENSMICG00000032352 RBM11 (ENSMICG00000037489) LIPI (ENSMICG00000004142) ROBO2 (ENSMICG00000010408) ROBO1 (ENSMICG00000005222) GBE1 (ENSMICG00000006182) #12 CADM2 (ENSMICG00000014503) #13 VGLL3 (ENSMICG00000043885) #14 ENSMICG00000037728 #15 POU1F1 (ENSMICG00000009690) #16 HTR1F (ENSMICG00000043065) #17 CGGBP1 (ENSMICG00000047167) #18 ZNF654 (ENSMICG00000031713) #19 C3orf38 (ENSMICG00000017722) #20 ENSMICG00000029440 EPHA3 (ENSMICG00000005266) #22 PROS1 (ENSMICG00000011858) #23 STX19 (ENSMICG00000030627) #25 ARL13B (ENSMICG00000011874) #24 NSUN3 (ENSMICG00000011886) #26 ENSMICG00000008770 ENSMICG00000027233 ENSMICG00000047247 Lemuriformes_a ANCESTRAL SPECIES 79 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B.c #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.e.a.b.a.a.b ENSGT01090000260017.c.b.a.a.e.a.a.a.b ENSGT01090000260017.c.b.a.a.f ENSGT01090000260017.c.b.b.c.b Coquerels sifaka MODERN SPECIES 303 CADM2 (ENSPCOG00000015798) #13 VGLL3 (ENSPCOG00000017214) #14 ENSPCOG00000027230 #15 POU1F1 (ENSPCOG00000007811) #16 HTR1F (ENSPCOG00000012577) #17 ENSPCOG00000025977 #18 ZNF654 (ENSPCOG00000026116) #19 C3orf38 (ENSPCOG00000019942) #20 EPHA3 (ENSPCOG00000023651) #22 PROS1 (ENSPCOG00000024926) #23 ARL13B (ENSPCOG00000013506) #24 NSUN3 (ENSPCOG00000021625) #26 Greater bamboo lemur MODERN SPECIES 778 VGLL3 (ENSPSMG00000017431) #14 CHMP2B (ENSPSMG00000017420) #15 POU1F1 (ENSPSMG00000017405) #16 HTR1F (ENSPSMG00000017383) #17 CGGBP1 (ENSPSMG00000017379) #18 ZNF654 (ENSPSMG00000017372) #19 C3orf38 (ENSPSMG00000017354) #20 ENSPSMG00000017351 EPHA3 (ENSPSMG00000017314) #22 Bushbaby MODERN SPECIES 124 ROBO2 (ENSOGAG00000011404) ENSOGAG00000009747 ENSOGAG00000029904 GBE1 (ENSOGAG00000000770) #12 CADM2 (ENSOGAG00000010480) #13 VGLL3 (ENSOGAG00000010364) #14 POU1F1 (ENSOGAG00000004578) #16 CHMP2B (ENSOGAG00000004577) #15 HTR1F (ENSOGAG00000027352) #17 CGGBP1 (ENSOGAG00000034139) #18 ENSOGAG00000034600 #19 ENSOGAG00000029395 #19 C3orf38 (ENSOGAG00000028975) #20 ENSOGAG00000029652 ENSOGAG00000028160 EPHA3 (ENSOGAG00000013293) #22 ENSOGAG00000010941 ENSOGAG00000033367 ENSOGAG00000030999 PROS1 (ENSOGAG00000001770) #23 ARL13B (ENSOGAG00000001771) #24 STX19 (ENSOGAG00000001774) #25 NSUN3 (ENSOGAG00000001776) #26 ENSOGAG00000030126 ENSOGAG00000033348 ENSOGAG00000029221 ENSOGAG00000033469 ENSOGAG00000000535 ARL6 (ENSOGAG00000000536) ENSOGAG00000030475 ENSOGAG00000012159 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a ENSGT01090000260017.c.b.b.c.b Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a ENSGT01090000260017.c.b.a.a.c.b Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.b.c.a.a ENSGT01090000260017.c.b.a.a.c.a.b.a ENSGT01090000260017.c.b.a.a.c.a.b.b Suina ANCESTRAL SPECIES 35 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.b.b ENSGT01090000260017.c.b.b.c.a.a.c.a.b ENSGT01090000260017.c.b.a.a.c.a.b.a ENSGT01090000260017.c.b.a.a.c.a.a.a.a.b Chacoan peccary MODERN SPECIES 947 ENSCWAG00000018579 RBM11 (ENSCWAG00000018466) LIPI (ENSCWAG00000018351) ROBO2 (ENSCWAG00000017993) ROBO1 (ENSCWAG00000017484) GBE1 (ENSCWAG00000017291) #12 CADM2 (ENSCWAG00000017105) #13 VGLL3 (ENSCWAG00000017053) #14 CHMP2B (ENSCWAG00000016955) #15 POU1F1 (ENSCWAG00000016839) #16 HTR1F (ENSCWAG00000016824) #17 CGGBP1 (ENSCWAG00000016805) #18 ZNF654 (ENSCWAG00000016765) #19 C3orf38 (ENSCWAG00000016749) #20 ENSCWAG00000016736 EPHA3 (ENSCWAG00000016457) #22 PROS1 (ENSCWAG00000016247) #23 STX19 (ENSCWAG00000016209) #25 ARL13B (ENSCWAG00000016099) #24 NSUN3 (ENSCWAG00000016072) #26 EPHA6 (ENSCWAG00000015907) ARL6 (ENSCWAG00000015889) CRYBG3 (ENSCWAG00000015861) RIOX2 (ENSCWAG00000015820) GABRR3 (ENSCWAG00000015758) ENSCWAG00000015734 ENSCWAG00000015701 ENSCWAG00000015665 ENSCWAG00000015616 ENSCWAG00000015601 ENSCWAG00000015543 Pig MODERN SPECIES 4 ROBO1 (ENSSSCG00000012001) ENSSSCG00000050662 GBE1 (ENSSSCG00000012000) #12 ENSSSCG00000060930 ENSSSCG00000029127 ENSSSCG00000062632 CADM2 (ENSSSCG00000011999) #13 VGLL3 (ENSSSCG00000032398) #14 CHMP2B (ENSSSCG00000011997) #15 POU1F1 (ENSSSCG00000011996) #16 HTR1F (ENSSSCG00000030227) #17 CGGBP1 (ENSSSCG00000032182) #18 ZNF654 (ENSSSCG00000036885) #19 C3orf38 (ENSSSCG00000034645) #20 ENSSSCG00000060301 EPHA3 (ENSSSCG00000026130) #22 PROS1 (ENSSSCG00000025463) #23 STX19 (ENSSSCG00000045484) #25 ARL13B (ENSSSCG00000027571) #24 NSUN3 (ENSSSCG00000027432) #26 EPHA6 (ENSSSCG00000033898) ENSSSCG00000047991 ARL6 (ENSSSCG00000027278) ENSSSCG00000054598 CRYBG3 (ENSSSCG00000022895) RIOX2 (ENSSSCG00000034501) GABRR3 (ENSSSCG00000032124) ENSSSCG00000038935 ENSSSCG00000060292 ENSSSCG00000063115 ENSSSCG00000061410 Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.b.b.b ENSGT01090000260017.c.b.b.c.a.a ENSGT01090000260017.c.b.a.a.c.a.b.a Camelidae ANCESTRAL SPECIES ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00390000008135 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a.ab ENSGT01090000260017.c.b.a.b.a.a.`b.b ENSGT01090000260017.c.b.a.a.c.a.b.b.b ENSGT01090000260017.c.b.b.c.a.a ENSGT01090000260017.c.b.a.a.c.a.b.b.a ENSGT01090000260017.c.b.a.a.c.b.a Alpaca MODERN SPECIES 5635 EPHA3 (ENSVPAG00000000339) #22 Arabian camel MODERN SPECIES LIPI (ENSCDRG00005004780) ROBO2 (ENSCDRG00005004423) ENSCDRG00005004387 ROBO1 (ENSCDRG00005003786) GBE1 (ENSCDRG00005003514) #12 ENSCDRG00005003468 CADM2 (ENSCDRG00005003365) #13 VGLL3 (ENSCDRG00005003327) #14 CHMP2B (ENSCDRG00005003294) #15 POU1F1 (ENSCDRG00005003277) #16 HTR1F (ENSCDRG00005003267) #17 CGGBP1 (ENSCDRG00005003263) #18 ZNF654 (ENSCDRG00005003253) #19 C3orf38 (ENSCDRG00005003245) #20 ENSCDRG00005003241 EPHA3 (ENSCDRG00005003214) #22 PROS1 (ENSCDRG00005003101) #23 STX19 (ENSCDRG00005003075) #25 ARL13B (ENSCDRG00005003050) #24 NSUN3 (ENSCDRG00005003033) #26 EPHA6 (ENSCDRG00005002980) ARL6 (ENSCDRG00005002946) CRYBG3 (ENSCDRG00005002847) RIOX2 (ENSCDRG00005002797) GABRR3 (ENSCDRG00005002777) ENSCDRG00005002763 ENSCDRG00005002751 ENSCDRG00005002742 ENSCDRG00005002735 ENSCDRG00005002728 ENSCDRG00005002716 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.b.b.b ENSGT01090000260017.c.b.b.c.a.a ENSGT01090000260017.c.b.a.a.c.a.b.a Cetacea ANCESTRAL SPECIES 10 ENSGT00940000161940 ENSGT00940000155448.cb.b ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00990000208907 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.a.a.a ENSGT01090000260017.c.b.a.a.d ENSGT01090000260017.c.b.b.d ENSGT00390000002596 ENSGT01050000244888.a.a Odontoceti ANCESTRAL SPECIES 9 ENSGT00940000161940 ENSGT00940000155448.cb.b ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00990000208907 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.b.c.a.b ENSGT01090000260017.c.b.a.a.d ENSGT01090000260017.c.b.b.d ENSGT00390000002596 ENSGT01050000244888.a.a Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.d ENSGT01090000260017.c.b.b.d ENSGT00390000002596 ENSGT01050000244888.a.a ENSGT00390000017311 Dolphin MODERN SPECIES 279 EPHA3 (ENSTTRG00000000704) #22 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000155448.cb.b ENSGT00940000156324 ENSGT00940000154477 ENSGT00940000155121.m.b.a ENSGT00940000153942.b.e ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000168680 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.d ENSGT01090000260017.c.b.b.d ENSGT00390000002596 ENSGT01050000244888.a.a Vaquita MODERN SPECIES 15 ENSPSNG00000009185 ENSPSNG00000009153 GBE1 (ENSPSNG00000009120) #12 ENSPSNG00000009092 ENSPSNG00000008937 ENSPSNG00000008903 CADM2 (ENSPSNG00000008741) #13 VGLL3 (ENSPSNG00000008690) #14 CHMP2B (ENSPSNG00000008598) #15 POU1F1 (ENSPSNG00000008471) #16 HTR1F (ENSPSNG00000008411) #17 CGGBP1 (ENSPSNG00000008398) #18 ZNF654 (ENSPSNG00000008344) #19 C3orf38 (ENSPSNG00000008317) #20 ENSPSNG00000004260 EPHA3 (ENSPSNG00000004189) #22 DNAJC30 (ENSPSNG00000004149) PROS1 (ENSPSNG00000004103) #23 STX19 (ENSPSNG00000004082) #25 ARL13B (ENSPSNG00000004045) #24 NSUN3 (ENSPSNG00000004022) #26 ENSPSNG00000004011 EPHA6 (ENSPSNG00000003974) ARL6 (ENSPSNG00000003948) CRYBG3 (ENSPSNG00000003916) RIOX2 (ENSPSNG00000003888) GABRR3 (ENSPSNG00000003862) ENSPSNG00000003850 ENSPSNG00000003802 ENSPSNG00000003762 GPR15 (ENSPSNG00000003741) Monodontidae ANCESTRAL SPECIES 11 ENSGT00940000156324 ENSGT00940000154477 ENSGT00940000155121.m.b.a ENSGT00940000153942.b.e ENSGT00390000017040 #12 ENSGT00910000148394 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000168680 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT00390000002596 ENSGT01050000244888.a.a ENSGT00390000017311 ENSGT00850000132566 Beluga whale MODERN SPECIES 111 ROBO2 (ENSDLEG00000010620) ROBO1 (ENSDLEG00000010888) ENSDLEG00000011074 ENSDLEG00000011085 GBE1 (ENSDLEG00000011144) #12 ENSDLEG00000011659 CADM2 (ENSDLEG00000011672) #13 VGLL3 (ENSDLEG00000011689) #14 ENSDLEG00000011697 CHMP2B (ENSDLEG00000011704) #15 POU1F1 (ENSDLEG00000011716) #16 HTR1F (ENSDLEG00000011735) #17 CGGBP1 (ENSDLEG00000011740) #18 ZNF654 (ENSDLEG00000011750) #19 CUNH3orf38 (ENSDLEG00000011776) #20 EPHA3 (ENSDLEG00000011806) #22 PROS1 (ENSDLEG00000011970) #23 ARL13B (ENSDLEG00000012006) #24 STX19 (ENSDLEG00000012042) #25 NSUN3 (ENSDLEG00000012057) #26 ENSDLEG00000012067 ENSDLEG00000012079 EPHA6 (ENSDLEG00000012104) ARL6 (ENSDLEG00000012235) CRYBG3 (ENSDLEG00000012264) RIOX2 (ENSDLEG00000012309) GABRR3 (ENSDLEG00000012343) ENSDLEG00000012372 ENSDLEG00000012396 GPR15 (ENSDLEG00000012414) CPOX (ENSDLEG00000012417) Narwhal MODERN SPECIES 297 ENSMMNG00015003371 ENSMMNG00015003385 GBE1 (ENSMMNG00015003410) #12 ENSMMNG00015003457 ENSMMNG00015003474 ENSMMNG00015003490 CADM2 (ENSMMNG00015003527) #13 VGLL3 (ENSMMNG00015003657) #14 CHMP2B (ENSMMNG00015003696) #15 POU1F1 (ENSMMNG00015003752) #16 HTR1F (ENSMMNG00015003796) #17 CGGBP1 (ENSMMNG00015003811) #18 ZNF654 (ENSMMNG00015003829) #19 C3orf38 (ENSMMNG00015003866) #20 ENSMMNG00015003879 EPHA3 (ENSMMNG00015003921) #22 PROS1 (ENSMMNG00015003999) #23 ARL13B (ENSMMNG00015004068) #24 STX19 (ENSMMNG00015004120) #25 NSUN3 (ENSMMNG00015004134) #26 ENSMMNG00015004149 ENSMMNG00015004216 EPHA6 (ENSMMNG00015004230) ARL6 (ENSMMNG00015004259) CRYBG3 (ENSMMNG00015004295) RIOX2 (ENSMMNG00015004366) GABRR3 (ENSMMNG00015004402) ENSMMNG00015004423 ENSMMNG00015004500 GPR15 (ENSMMNG00015004526) CPOX (ENSMMNG00015004537) Sperm whale MODERN SPECIES LIPI (ENSPCTG00005020089) ENSPCTG00005019983 ROBO2 (ENSPCTG00005019510) ROBO1 (ENSPCTG00005018380) GBE1 (ENSPCTG00005018274) #12 ENSPCTG00005018235 CADM2 (ENSPCTG00005017923) #13 VGLL3 (ENSPCTG00005017816) #14 ENSPCTG00005017777 CHMP2B (ENSPCTG00005017666) #15 POU1F1 (ENSPCTG00005017504) #16 HTR1F (ENSPCTG00005017483) #17 CGGBP1 (ENSPCTG00005017471) #18 ZNF654 (ENSPCTG00005017396) #19 C1H3orf38 (ENSPCTG00005017377) #20 EPHA3 (ENSPCTG00005017153) #22 PROS1 (ENSPCTG00005016923) #23 STX19 (ENSPCTG00005016902) #25 ARL13B (ENSPCTG00005016685) #24 NSUN3 (ENSPCTG00005016640) #26 EPHA6 (ENSPCTG00005016174) ARL6 (ENSPCTG00005016118) CRYBG3 (ENSPCTG00005015975) RIOX2 (ENSPCTG00005015885) GABRR3 (ENSPCTG00005015754) ENSPCTG00005015729 ENSPCTG00005015303 ENSPCTG00005015120 GPR15 (ENSPCTG00005015092) CPOX (ENSPCTG00005015043) ST3GAL6 (ENSPCTG00005014951) Blue whale MODERN SPECIES 15 ENSBMSG00010015783 ROBO2 (ENSBMSG00010015515) ROBO1 (ENSBMSG00010014459) GBE1 (ENSBMSG00010014217) #12 ENSBMSG00010014177 ENSBMSG00010014149 CADM2 (ENSBMSG00010013918) #13 VGLL3 (ENSBMSG00010013835) #14 CHMP2B (ENSBMSG00010013802) #15 POU1F1 (ENSBMSG00010013769) #16 HTR1F (ENSBMSG00010013753) #17 CGGBP1 (ENSBMSG00010013748) #18 ZNF654 (ENSBMSG00010013729) #19 C3orf38 (ENSBMSG00010013712) #20 ENSBMSG00010013699 EPHA3 (ENSBMSG00010013640) #22 PROS1 (ENSBMSG00010013545) #23 STX19 (ENSBMSG00010013516) #25 ARL13B (ENSBMSG00010013489) #24 NSUN3 (ENSBMSG00010013473) #26 ENSBMSG00010013454 EPHA6 (ENSBMSG00010013383) ARL6 (ENSBMSG00010013360) CRYBG3 (ENSBMSG00010013311) RIOX2 (ENSBMSG00010013267) GABRR3 (ENSBMSG00010013229) OR5AC2 (ENSBMSG00010013206) ENSBMSG00010013178 ENSBMSG00010013162 ENSBMSG00010013151 ENSBMSG00010013142 Pecora ANCESTRAL SPECIES 8 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.a.z ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.y.a ENSGT01090000260017.c.b.a.a.c.a.b.b.b ENSGT01090000260017.c.b.b.c.a.a Percora_a ANCESTRAL SPECIES 7 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.a.z ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.y.a.a.b ENSGT01090000260017.c.b.a.a.c.a.b.b.b ENSGT01090000260017.c.b.b.c.a.a Bovidae ANCESTRAL SPECIES 9 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.a.y.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.y.a.a.b ENSGT01090000260017.c.b.a.b.a.a.z ENSGT01090000260017.c.b.a.a.c.a.b.b.b Caprinae ANCESTRAL SPECIES 42 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT00940000163614.g.b ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154037.C.h Rambouillet Sheep MODERN SPECIES ENSOARG00020002152 ENSOARG00020002165 GBE1 (ENSOARG00020002198) #12 ENSOARG00020002330 CADM2 (ENSOARG00020002352) #13 ENSOARG00020002390 VGLL3 (ENSOARG00020002402) #14 CHMP2B (ENSOARG00020002422) #15 POU1F1 (ENSOARG00020002444) #16 ENSOARG00020002512 HTR1F (ENSOARG00020002525) #17 CGGBP1 (ENSOARG00020002537) #18 ZNF654 (ENSOARG00020002568) #19 C3orf38 (ENSOARG00020002608) #20 ENSOARG00020002616 EPHA3 (ENSOARG00020002625) #22 PROS1 (ENSOARG00020002698) #23 ARL13B (ENSOARG00020002758) #24 STX19 (ENSOARG00020002829) #25 NSUN3 (ENSOARG00020002833) #26 ENSOARG00020002843 ENSOARG00020002852 ENSOARG00020002856 ENSOARG00020002865 ENSOARG00020002873 CYP4F21 (ENSOARG00020002888) ENSOARG00020002924 ENSOARG00020002976 ENSOARG00020003031 ENSOARG00020003101 CYP4F8 (ENSOARG00020003149) Goat MODERN SPECIES ENSCHIG00000024065 ENSCHIG00000017301 ENSCHIG00000001025 ENSCHIG00000005825 GBE1 (ENSCHIG00000025102) #12 CADM2 (ENSCHIG00000024207) #13 ENSCHIG00000003941 VGLL3 (ENSCHIG00000021391) #14 CHMP2B (ENSCHIG00000014003) #15 POU1F1 (ENSCHIG00000026743) #16 ENSCHIG00000003029 CGGBP1 (ENSCHIG00000013576) #18 ZNF654 (ENSCHIG00000014626) #19 C3orf38 (ENSCHIG00000011989) #20 ENSCHIG00000025993 EPHA3 (ENSCHIG00000015544) #22 PROS1 (ENSCHIG00000010494) #23 ARL13B (ENSCHIG00000015560) #24 STX19 (ENSCHIG00000002872) #25 NSUN3 (ENSCHIG00000012629) #26 ENSCHIG00000007885 ENSCHIG00000007969 EPHA6 (ENSCHIG00000022528) ENSCHIG00000017327 ARL6 (ENSCHIG00000017792) ENSCHIG00000004089 ENSCHIG00000016450 RCAN1 (ENSCHIG00000021307) ENSCHIG00000023335 KCNE1 (ENSCHIG00000011448) ENSCHIG00000010330 Bovinae ANCESTRAL SPECIES 6 ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00940000157074.ib.b ENSGT00390000017040 #12 ENSGT00940000161003.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00950000182825.A.a.b.a.b.a.b.a.a.b ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.f ENSGT01090000260017.c.b.a.b.a.a.y.b ENSGT01090000260017.c.b.a.b.b.e ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.y.a.a.b Bos ANCESTRAL SPECIES 7 ENSGT00870000136493.c ENSGT00940000161940.f ENSGT00940000154477 ENSGT00940000156324 ENSGT00940000157074.ib.b ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00950000182825.A.a.b.a.b.a.b.a.a.b ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.f ENSGT01090000260017.c.b.a.b.a.a.y.a.b ENSGT01090000260017.c.b.a.b.b.e ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.y.a.a.b Bos_a ANCESTRAL SPECIES 5 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00950000182825.A.a.b.a.b.a.b.a.a.b ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.f ENSGT01090000260017.c.b.a.b.b.e ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.z ENSGT01090000260017.c.b.a.a.c.a.b.b.b Domestic yak MODERN SPECIES ENSBGRG00000000147 ENSBGRG00000000148 SMIM11 (ENSBGRG00000000149) C21orf140 (ENSBGRG00000000150) SMIM34 (ENSBGRG00000000151) ENSBGRG00000000152 KCNE1 (ENSBGRG00000000153) RCAN1 (ENSBGRG00000000154) ENSBGRG00000000157 ENSBGRG00000000158 HTR1F (ENSBGRG00000000161) #17 CGGBP1 (ENSBGRG00000000164) #18 ZNF654 (ENSBGRG00000000166) #19 C3orf38 (ENSBGRG00000000178) #20 ENSBGRG00000000182 EPHA3 (ENSBGRG00000000197) #22 PROS1 (ENSBGRG00000000266) #23 ARL13B (ENSBGRG00000000594) #24 ENSBGRG00000000717 #25 NSUN3 (ENSBGRG00000000728) #26 ENSBGRG00000000740 ENSBGRG00000000751 EPHA6 (ENSBGRG00000000760) ENSBGRG00000000808 ENSBGRG00000000820 ARL6 (ENSBGRG00000000838) ENSBGRG00000000859 CRYBG3 (ENSBGRG00000000874) RIOX2 (ENSBGRG00000000955) GABRR3 (ENSBGRG00000001015) ENSBGRG00000001032 Wild yak MODERN SPECIES 524 EPHA3 (ENSBMUG00000015695) #22 PROS1 (ENSBMUG00000015629) #23 STX19 (ENSBMUG00000015542) #25 ARL13B (ENSBMUG00000015524) #24 NSUN3 (ENSBMUG00000015466) #26 Bos_b ANCESTRAL SPECIES 5 ENSGT00940000161940.f ENSGT00940000154477 ENSGT00940000156324 ENSGT00940000157074.ib.b ENSGT00390000017040 #12 ENSGT00940000161003.b ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00950000182825.A.a.b.a.b.a.b.a.a.b ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.f ENSGT01090000260017.c.b.a.b.a.a.y.a.b ENSGT01090000260017.c.b.a.b.b.e ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a.y.a.a.b Hybrid Bos Indicus MODERN SPECIES ENSBIXG00005021769 ENSBIXG00005021750 ENSBIXG00005021731 GBE1 (ENSBIXG00005021600) #12 ENSBIXG00005021569 ENSBIXG00005021559 CADM2 (ENSBIXG00005007370) #13 ENSBIXG00005021271 VGLL3 (ENSBIXG00005021216) #14 CHMP2B (ENSBIXG00005003570) #15 POU1F1 (ENSBIXG00005021068) #16 HTR1F (ENSBIXG00005021002) #17 CGGBP1 (ENSBIXG00005020970) #18 ZNF654 (ENSBIXG00005020890) #19 C3orf38 (ENSBIXG00005020824) #20 EPHA3 (ENSBIXG00005003506) #22 PROS1 (ENSBIXG00005020530) #23 ARL13B (ENSBIXG00005003379) #24 STX19 (ENSBIXG00005020189) #25 NSUN3 (ENSBIXG00005020183) #26 ENSBIXG00005020172 ENSBIXG00005003317 ENSBIXG00005003314 ENSBIXG00005003301 EPHA6 (ENSBIXG00005003280) ENSBIXG00005019935 ARL6 (ENSBIXG00005019908) ENSBIXG00005019879 ENSBIXG00005003248 CRYBG3 (ENSBIXG00005019821) RIOX2 (ENSBIXG00005019718) Cow MODERN SPECIES ROBO1 (ENSBTAG00000009851) ENSBTAG00000051036 ENSBTAG00000008359 GBE1 (ENSBTAG00000036262) #12 ENSBTAG00000054327 ENSBTAG00000045974 CADM2 (ENSBTAG00000009219) #13 VGLL3 (ENSBTAG00000026156) #14 CHMP2B (ENSBTAG00000007939) #15 POU1F1 (ENSBTAG00000009128) #16 HTR1F (ENSBTAG00000039151) #17 CGGBP1 (ENSBTAG00000046959) #18 ZNF654 (ENSBTAG00000023675) #19 C1H3orf38 (ENSBTAG00000007970) #20 CSNKA2IP (ENSBTAG00000045590) EPHA3 (ENSBTAG00000006811) #22 PROS1 (ENSBTAG00000023652) #23 ARL13B (ENSBTAG00000005155) #24 STX19 (ENSBTAG00000005162) #25 NSUN3 (ENSBTAG00000015728) #26 ENSBTAG00000034182 ENSBTAG00000050258 EPHA6 (ENSBTAG00000044111) ARL6 (ENSBTAG00000010091) CRYBG3 (ENSBTAG00000047147) RIOX2 (ENSBTAG00000015546) GABRR3 (ENSBTAG00000001416) OR5AC31 (ENSBTAG00000048630) ENSBTAG00000054232 OR5H28 (ENSBTAG00000050430) OR5K20 (ENSBTAG00000052415) American bison MODERN SPECIES 3174 HTR1F (ENSBBBG00000003781) #17 CGGBP1 (ENSBBBG00000008915) #18 ENSBBBG00000015249 #19 C3orf38 (ENSBBBG00000015255) #20 ENSBBBG00000015262 EPHA3 (ENSBBBG00000015296) #22 PROS1 (ENSBBBG00000001323) #23 STX19 (ENSBBBG00000001308) #25 ARL13B (ENSBBBG00000001249) #24 NSUN3 (ENSBBBG00000003503) #26 ENSBBBG00000015327 Siberian musk deer MODERN SPECIES 279 ENSMMSG00000005872 ENSMMSG00000005849 ENSMMSG00000005800 CADM2 (ENSMMSG00000005641) #13 VGLL3 (ENSMMSG00000005580) #14 CHMP2B (ENSMMSG00000005505) #15 POU1F1 (ENSMMSG00000005357) #16 CGGBP1 (ENSMMSG00000005329) #18 ZNF654 (ENSMMSG00000005277) #19 C3orf38 (ENSMMSG00000005242) #20 CSNKA2IP (ENSMMSG00000005187) ENSMMSG00000005161 EPHA3 (ENSMMSG00000005101) #22 PROS1 (ENSMMSG00000004821) #23 STX19 (ENSMMSG00000004737) #25 ARL13B (ENSMMSG00000004620) #24 NSUN3 (ENSMMSG00000004538) #26 Yarkand deer MODERN SPECIES 24 ENSCHYG00000023467 ROBO1 (ENSCHYG00000023629) ENSCHYG00000024694 GBE1 (ENSCHYG00000024722) #12 CADM2 (ENSCHYG00000024980) #13 ENSCHYG00000025078 VGLL3 (ENSCHYG00000025107) #14 CHMP2B (ENSCHYG00000025129) #15 POU1F1 (ENSCHYG00000025212) #16 ENSCHYG00000025277 HTR1F (ENSCHYG00000025282) #17 CGGBP1 (ENSCHYG00000025291) #18 ZNF654 (ENSCHYG00000025306) #19 C3orf38 (ENSCHYG00000025383) #20 CSNKA2IP (ENSCHYG00000025414) EPHA3 (ENSCHYG00000025451) #22 PROS1 (ENSCHYG00000025663) #23 ARL13B (ENSCHYG00000025815) #24 STX19 (ENSCHYG00000025865) #25 ENSCHYG00000025873 NSUN3 (ENSCHYG00000025884) #26 ENSCHYG00000025897 ENSCHYG00000025906 ENSCHYG00000025916 EPHA6 (ENSCHYG00000025942) ARL6 (ENSCHYG00000025963) CRYBG3 (ENSCHYG00000014455) RIOX2 (ENSCHYG00000014682) ENSCHYG00000014780 ENSCHYG00000014808 ENSCHYG00000014848 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a ENSGT01090000260017.c.b.a.a.c.b Carnivora ANCESTRAL SPECIES 10 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.b Caniformia ANCESTRAL SPECIES ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.b Caniformia_b ANCESTRAL SPECIES ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000154477 ENSGT00940000156324 ENSGT00940000153284.b.p ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a.b ENSGT01090000260017.c.b.b.c.b Ursidae ANCESTRAL SPECIES 1 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00940000153284.b.p ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00950000182872.f.b.a.h.b.b.b ENSGT00940000154490.b ENSGT00950000186348 ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.a.b Ursus ANCESTRAL SPECIES 302 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 Polar bear MODERN SPECIES 106 EPHA3 (ENSUMAG00000001426) #22 PROS1 (ENSUMAG00000001391) #23 STX19 (ENSUMAG00000001384) #25 ARL13B (ENSUMAG00000001367) #24 NSUN3 (ENSUMAG00000001362) #26 ENSUMAG00000001293 ENSUMAG00000001277 ARMCX3 (ENSUMAG00000001229) ARMCX2 (ENSUMAG00000001223) American black bear MODERN SPECIES 5512 EPHA3 (ENSUAMG00000018481) #22 Giant Panda MODERN SPECIES RBM11 (ENSAMEG00000028473) ENSAMEG00000014364 ENSAMEG00000011404 ENSAMEG00000001345 ENSAMEG00000011120 GBE1 (ENSAMEG00000011122) #12 CADM2 (ENSAMEG00000004477) #13 VGLL3 (ENSAMEG00000007269) #14 CHMP2B (ENSAMEG00000007276) #15 POU1F1 (ENSAMEG00000007286) #16 HTR1F (ENSAMEG00000019746) #17 CGGBP1 (ENSAMEG00000019754) #18 ZNF654 (ENSAMEG00000027605) #19 C3orf38 (ENSAMEG00000015043) #20 ENSAMEG00000015048 EPHA3 (ENSAMEG00000008476) #22 ENSAMEG00000025434 PROS1 (ENSAMEG00000002383) #23 ARL13B (ENSAMEG00000002460) #24 STX19 (ENSAMEG00000002485) #25 NSUN3 (ENSAMEG00000002487) #26 ENSAMEG00000001466 EPHA6 (ENSAMEG00000013666) ENSAMEG00000029131 ENSAMEG00000023658 ARL6 (ENSAMEG00000013671) CRYBG3 (ENSAMEG00000024688) RIOX2 (ENSAMEG00000013693) GABRR3 (ENSAMEG00000024214) ENSAMEG00000029849 ENSAMEG00000030375 Mustelinae ANCESTRAL SPECIES 150 ENSGT00950000185069 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b.p ENSGT01090000260017.c.b.a.b.b.o ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a.b.c American mink MODERN SPECIES 38 ENSNVIG00000002737 CADM2 (ENSNVIG00000002788) #13 VGLL3 (ENSNVIG00000002878) #14 ENSNVIG00000002892 CHMP2B (ENSNVIG00000002896) #15 POU1F1 (ENSNVIG00000002958) #16 HTR1F (ENSNVIG00000002994) #17 CGBP1 (ENSNVIG00000003003) #18 ZNF654 (ENSNVIG00000003008) #19 C3orf38 (ENSNVIG00000003029) #20 ENSNVIG00000003051 EPHA3 (ENSNVIG00000003087) #22 PROS1 (ENSNVIG00000003174) #23 ARL13B (ENSNVIG00000003268) #24 STX19 (ENSNVIG00000003337) #25 NSUN3 (ENSNVIG00000003347) #26 ENSNVIG00000003383 ENSNVIG00000003390 EPHA6 (ENSNVIG00000003420) ARL6 (ENSNVIG00000003444) ENSNVIG00000003507 ENSNVIG00000003532 GABRR3 (ENSNVIG00000003577) ENSNVIG00000003594 ENSNVIG00000003621 ENSNVIG00000003628 ENSNVIG00000003635 Ferret MODERN SPECIES 426 HTR1F (ENSMPUG00000019489) #17 ENSMPUG00000019485 #18 ZNF654 (ENSMPUG00000008284) #19 C3orf38 (ENSMPUG00000008274) #20 EPHA3 (ENSMPUG00000008263) #22 Canidae ANCESTRAL SPECIES 35 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.b.a ENSGT01090000260017.c.b.a.a.c.a.c.b Canis_lupus ANCESTRAL SPECIES 31 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00390000005534.b.b.c.b.b.b.s ENSGT00940000154490.b ENSGT00950000185326.a ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a Dingo MODERN SPECIES 65 C3orf38 (ENSCAFG00020010046) #20 ENSCAFG00020010037 EPHA3 (ENSCAFG00020009975) #22 PROS1 (ENSCAFG00020009928) #23 STX19 (ENSCAFG00020009915) #25 ARL13B (ENSCAFG00020009901) #24 NSUN3 (ENSCAFG00020009899) #26 ENSCAFG00020009881 ENSCAFG00020009869 ENSCAFG00020009849 ENSCAFG00020009845 ARL6 (ENSCAFG00020009819) CRYBG3 (ENSCAFG00020009652) RIOX2 (ENSCAFG00020009638) ENSCAFG00020009634 ENSCAFG00020009623 ENSCAFG00020009617 ENSCAFG00020009612 Dog MODERN SPECIES 26 C33H3orf38 (ENSCAFG00845030412) #20 ENSCAFG00845030425 ENSCAFG00845030437 ENSCAFG00845030457 EPHA3 (ENSCAFG00845030500) #22 PROS1 (ENSCAFG00845030582) #23 ARL13B (ENSCAFG00845030616) #24 STX19 (ENSCAFG00845030641) #25 NSUN3 (ENSCAFG00845030646) #26 ENSCAFG00845014808 ENSCAFG00845014851 ENSCAFG00845014877 ENSCAFG00845015035 ENSCAFG00845015075 ARL6 (ENSCAFG00845015298) CRYBG3 (ENSCAFG00845015402) RIOX2 (ENSCAFG00845015574) OR5AC27 (ENSCAFG00845015721) OR5AC1 (ENSCAFG00845015742) ENSCAFG00845015762 Red fox MODERN SPECIES 6 CUNH3orf38 (ENSVVUG00000021477) #20 CSNKA2IP (ENSVVUG00000021486) EPHA3 (ENSVVUG00000021494) #22 PROS1 (ENSVVUG00000021507) #23 ARL13B (ENSVVUG00000021511) #24 STX19 (ENSVVUG00000021519) #25 NSUN3 (ENSVVUG00000021521) #26 ENSVVUG00000021523 ENSVVUG00000021543 EPHA6 (ENSVVUG00000021548) ARL6 (ENSVVUG00000021551) CRYBG3 (ENSVVUG00000021552) RIOX2 (ENSVVUG00000021556) ENSVVUG00000021560 ENSVVUG00000021561 ENSVVUG00000021562 ENSVVUG00000021564 ENSVVUG00000021566 Felidae ANCESTRAL SPECIES 9 ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT01000000220593.a ENSGT00390000017040 #12 ENSGT00910000146935 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898.q #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.d ENSGT01090000260017.c.b.a.a.c.a.c.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.b.c Panthera ANCESTRAL SPECIES 17 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT01000000220593.a ENSGT00390000017040 #12 ENSGT00910000146935 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898.q #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT01000000222230 ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.b.c Panthera_a ANCESTRAL SPECIES 21 ENSGT00940000156324 ENSGT00940000154477 ENSGT01000000220593.a ENSGT00940000173065 ENSGT00390000017040 #12 ENSGT00910000146935 ENSGT00940000155947 #13 ENSGT00950000183206.b.c.a.b.b ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898.q #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT01000000222230 ENSGT00940000156459 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.a ENSGT01090000260017.c.b.a.a.c.a.c.a.b.c lion MODERN SPECIES 9 ENSPLOG00000014139 ENSPLOG00000014098 GBE1 (ENSPLOG00000013937) #12 ENSPLOG00000013875 CADM2 (ENSPLOG00000013632) #13 ENSPLOG00000013561 VGLL3 (ENSPLOG00000013497) #14 CHMP2B (ENSPLOG00000013401) #15 POU1F1 (ENSPLOG00000013268) #16 HTR1F (ENSPLOG00000013246) #17 CGGBP1 (ENSPLOG00000013226) #18 ZNF654 (ENSPLOG00000013196) #19 C3orf38 (ENSPLOG00000013154) #20 ENSPLOG00000013137 ENSPLOG00000013102 EPHA3 (ENSPLOG00000012751) #22 PROS1 (ENSPLOG00000012461) #23 STX19 (ENSPLOG00000012404) #25 ARL13B (ENSPLOG00000012320) #24 NSUN3 (ENSPLOG00000012279) #26 EPHA6 (ENSPLOG00000012019) ARL6 (ENSPLOG00000011951) ENSPLOG00000011919 CRYBG3 (ENSPLOG00000011497) RIOX2 (ENSPLOG00000011386) GABRR3 (ENSPLOG00000011321) ENSPLOG00000011276 ENSPLOG00000011252 ENSPLOG00000011136 ENSPLOG00000011104 OR5K4 (ENSPLOG00000011082) leopard MODERN SPECIES 128 ENSPPRG00000024357 VGLL3 (ENSPPRG00000024362) #14 CHMP2B (ENSPPRG00000022602) #15 POU1F1 (ENSPPRG00000022584) #16 HTR1F (ENSPPRG00000011399) #17 ENSPPRG00000011392 #18 ZNF654 (ENSPPRG00000022565) #19 C3orf38 (ENSPPRG00000022552) #20 EPHA3 (ENSPPRG00000022528) #22 PROS1 (ENSPPRG00000022467) #23 ARL13B (ENSPPRG00000022426) #24 STX19 (ENSPPRG00000011375) #25 NSUN3 (ENSPPRG00000022388) #26 Tiger MODERN SPECIES 166 GBE1 (ENSPTIG00000007192) #12 CADM2 (ENSPTIG00000007223) #13 VGLL3 (ENSPTIG00000007295) #14 CHMP2B (ENSPTIG00000007312) #15 POU1F1 (ENSPTIG00000007342) #16 HTR1F (ENSPTIG00000009203) #17 CGGBP1 (ENSPTIG00000009207) #18 ZNF654 (ENSPTIG00000007365) #19 C3orf38 (ENSPTIG00000007388) #20 EPHA3 (ENSPTIG00000007403) #22 Cat MODERN SPECIES 240 ROBO1 (ENSFCAG00000014501) ENSFCAG00000049370 ENSFCAG00000046219 GBE1 (ENSFCAG00000026461) #12 ENSFCAG00000049570 CADM2 (ENSFCAG00000024507) #13 VGLL3 (ENSFCAG00000003122) #14 CHMP2B (ENSFCAG00000030700) #15 POU1F1 (ENSFCAG00000002261) #16 HTR1F (ENSFCAG00000007493) #17 CGGBP1 (ENSFCAG00000022195) #18 ZNF654 (ENSFCAG00000029279) #19 CC2H3orf38 (ENSFCAG00000025538) #20 ENSFCAG00000026057 CSNKA2IP (ENSFCAG00000051225) EPHA3 (ENSFCAG00000024008) #22 PROS1 (ENSFCAG00000039149) #23 ARL13B (ENSFCAG00000025839) #24 STX19 (ENSFCAG00000027218) #25 NSUN3 (ENSFCAG00000005934) #26 ENSFCAG00000052988 EPHA6 (ENSFCAG00000023114) ARL6 (ENSFCAG00000023205) CRYBG3 (ENSFCAG00000023098) ENSFCAG00000043827 ENSFCAG00000038726 RIOX2 (ENSFCAG00000007324) GABRR3 (ENSFCAG00000018255) ENSFCAG00000039015 ENSFCAG00000043389 ENSFCAG00000031464 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT01050000244948.c.a #25 ENSGT00940000156365 #24 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.b ENSGT01090000260017.c.b.a.b.a.b ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.b ENSGT01090000260017.c.b.b.c.b Equus ANCESTRAL SPECIES 42 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 Donkey MODERN SPECIES 8 ENSEASG00005013626 ENSEASG00005013619 ENSEASG00005013609 ENSEASG00005013463 ROBO1 (ENSEASG00005013409) GBE1 (ENSEASG00005013400) #12 CADM2 (ENSEASG00005013394) #13 VGLL3 (ENSEASG00005013392) #14 CHMP2B (ENSEASG00005013390) #15 POU1F1 (ENSEASG00005013385) #16 HTR1F (ENSEASG00005013382) #17 CGGBP1 (ENSEASG00005024647) #18 ZNF654 (ENSEASG00005013373) #19 ENSEASG00005026635 #20 CSNKA2IP (ENSEASG00005032805) ENSEASG00005013123 #22 ENSEASG00005032817 ENSEASG00005025497 Horse MODERN SPECIES 18 ENSECAG00000045496 ROBO1 (ENSECAG00000017671) GBE1 (ENSECAG00000014096) #12 ENSECAG00000048019 ENSECAG00000052007 ENSECAG00000050225 CADM2 (ENSECAG00000013029) #13 VGLL3 (ENSECAG00000010617) #14 CHMP2B (ENSECAG00000010433) #15 POU1F1 (ENSECAG00000009205) #16 HTR1F (ENSECAG00000008408) #17 CGGBP1 (ENSECAG00000005320) #18 ZNF654 (ENSECAG00000005293) #19 ENSECAG00000005084 #20 CSNKA2IP (ENSECAG00000004527) EPHA3 (ENSECAG00000023211) #22 ENSECAG00000055427 ENSECAG00000057518 ENSECAG00000050199 Chiroptera ANCESTRAL SPECIES 13 ENSGT00940000162802 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.b ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.d ENSGT00390000002596 Microchiroptera ANCESTRAL SPECIES 11 ENSGT00890000139503 ENSGT00870000136493.c ENSGT00940000161940 ENSGT00940000156324 ENSGT00940000154477 ENSGT00390000017040 #12 ENSGT00940000155947 #13 ENSGT00530000063353.a.b.b #14 ENSGT00950000182832.B #15 ENSGT00940000158913 #16 ENSGT01010000222287.B.b.a.a.a #17 ENSGT00390000017898 #18 ENSGT00950000183034.A #19 ENSGT00390000000367 #20 ENSGT00390000012239 ENSGT00940000157088 #22 ENSGT00940000154035.b #23 ENSGT00940000156365 #24 ENSGT01050000244948.c.a #25 ENSGT00940000153665.b.a.a #26 ENSGT00940000154490.b ENSGT00940000156459 ENSGT00910000144911 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00940000159906 ENSGT01090000260017.c.b.a.b.a.a ENSGT01090000260017.c.b.a.a.c.b ENSGT01090000260017.c.b.b.c.b ENSGT01090000260017.c.b.b.d ENSGT00390000002596 Microbat MODERN SPECIES 1012 CADM2 (ENSMLUG00000013392) #13 VGLL3 (ENSMLUG00000001124) #14 CHMP2B (ENSMLUG00000009052) #15 POU1F1 (ENSMLUG00000012069) #16 ENSMLUG00000013597 ENSMLUG00000022618 ENSMLUG00000017149 HTR1F (ENSMLUG00000010837) #17 CGGBP1 (ENSMLUG00000025877) #18 ZNF654 (ENSMLUG00000027029) #19 C3orf38 (ENSMLUG00000004412) #20 ENSMLUG00000026257 EPHA3 (ENSMLUG00000002345) #22 PROS1 (ENSMLUG00000017471) #23 STX19 (ENSMLUG00000017475) #25 ARL13B (ENSMLUG00000017473) #24 NSUN3 (ENSMLUG00000017477) #26 ENSMLUG00000022282 ENSMLUG00000027690 Greater horseshoe bat MODERN SPECIES 11 ROBO1 (ENSRFEG00010004821) ENSRFEG00010004984 GBE1 (ENSRFEG00010004997) #12 ENSRFEG00010005014 ENSRFEG00010005021 ENSRFEG00010005026 CADM2 (ENSRFEG00010005043) #13 VGLL3 (ENSRFEG00010005058) #14 CHMP2B (ENSRFEG00010005066) #15 POU1F1 (ENSRFEG00010005083) #16 HTR1F (ENSRFEG00010005098) #17 CGGBP1 (ENSRFEG00010005102) #18 ZNF654 (ENSRFEG00010005110) #19 C3orf38 (ENSRFEG00010005118) #20 CSNKA2IP (ENSRFEG00010005126) EPHA3 (ENSRFEG00010005133) #22 PROS1 (ENSRFEG00010005167) #23 ARL13B (ENSRFEG00010005202) #24 STX19 (ENSRFEG00010005220) #25 NSUN3 (ENSRFEG00010005228) #26 ENSRFEG00010005236 EPHA6 (ENSRFEG00010005259) ARL6 (ENSRFEG00010005279) CRYBG3 (ENSRFEG00010005303) RIOX2 (ENSRFEG00010005336) ENSRFEG00010005383 ENSRFEG00010005411 ENSRFEG00010005429 ENSRFEG00010005443 OR5K4 (ENSRFEG00010005459) ENSRFEG00010005475 Megabat MODERN SPECIES 756 EPHA3 (ENSPVAG00000005631) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157088 #22 Common shrew MODERN SPECIES 2246 EPHA3 (ENSSARG00000008065) #22 Hedgehog MODERN SPECIES 2912 EPHA3 (ENSEEUG00000014227) #22