Glires	ANCESTRAL SPECIES	2	ENSGT00940000162802	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.b.a.b	ENSGT01090000260017.c.b.a.a	ENSGT01090000260017.c.b.b.c.b	ENSGT01090000260017.c.b.b.c.a
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000162802	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.b.a.b	ENSGT01090000260017.c.b.a.a.k.a.b	ENSGT01090000260017.c.b.a.a.k.b.a	ENSGT01090000260017.c.b.b.c.b
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.a.k.b.b	ENSGT01090000260017.c.b.b.c.b	ENSGT01090000260017.c.b.a.a.k.b.a	ENSGT01090000260017.c.b.a.a.k.a.b
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.b.a.b	ENSGT01090000260017.c.b.a.a.k.a.b	ENSGT01090000260017.c.b.a.a.k.b.a	ENSGT01090000260017.c.b.a.a.k.a.a.b
Muroidea	ANCESTRAL SPECIES	11	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a	ENSGT01090000260017.c.b.b.c.b	ENSGT01090000260017.c.b.a.a.k.b.b	ENSGT01090000260017.c.b.a.a.k.a.b.a	ENSGT01090000260017.c.b.a.a.k.b.a
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.b.a.b.e.a
Murinae	ANCESTRAL SPECIES	13	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b	ENSGT01090000260017.c.b.a.b.b.r.a.b.b.b.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.a.b.e.a	ENSGT01090000260017.c.b.a.b.a.b.e.b
Mus	ANCESTRAL SPECIES	13	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.a.b.e.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a	ENSGT01090000260017.c.b.a.b.a.b.e.b
Mus_A	ANCESTRAL SPECIES	18	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000153178.B.d.b	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a	ENSGT01090000260017.c.b.a.b.b.q.d	ENSGT01090000260017.c.b.a.b.a.b.e.a
Mus_B	ANCESTRAL SPECIES	18	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000153178.B.d.b	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a	ENSGT01090000260017.c.b.a.b.b.q.d	ENSGT01090000260017.c.b.a.b.a.b.e.a
Mus_C	ANCESTRAL SPECIES	12	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.b.b	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b.a	ENSGT01090000260017.c.b.a.b.b.q.d	ENSGT01090000260017.c.b.a.b.a.b.e.a	ENSGT01090000260017.c.b.a.b.a.b.e.b.c
Steppe mouse	MODERN SPECIES	3279									Htr1f (ENSMSIG00000021469) #15	ENSMSIG00000021413 #16	Cggbp1 (ENSMSIG00000021398) #17	Zfp654 (ENSMSIG00000021369) #18	ENSMSIG00000021355 #19	ENSMSIG00000021344 #20	Csnka2ip (ENSMSIG00000021335) #21	Epha3 (ENSMSIG00000021215) #22	Pros1 (ENSMSIG00000021194) #23	Stx19 (ENSMSIG00000021192) #24	Arl13b (ENSMSIG00000021172) #25	ENSMSIG00000021166 #26	Nsun3 (ENSMSIG00000021155) #27
spretus	MODERN SPECIES	7	Hspa13 (MGP_SPRETEiJ_G0021781)	Rbm11 (MGP_SPRETEiJ_G0021780)	Lipi (MGP_SPRETEiJ_G0021779)	Robo2 (MGP_SPRETEiJ_G0021778)	Robo1 (MGP_SPRETEiJ_G0021777)	Gbe1 (MGP_SPRETEiJ_G0021776)	MGP_SPRETEiJ_G0021775	Cadm2 (MGP_SPRETEiJ_G0021774)	Vgll3 (MGP_SPRETEiJ_G0021773)	Pou1f1 (MGP_SPRETEiJ_G0021772)	Chmp2b (MGP_SPRETEiJ_G0021771)	Htr1f (MGP_SPRETEiJ_G0021770) #15	Cggbp1 (MGP_SPRETEiJ_G0021769) #17	MGP_SPRETEiJ_G0021768 #18	MGP_SPRETEiJ_G0021767 #21	Epha3 (MGP_SPRETEiJ_G0021766) #22	Pros1 (MGP_SPRETEiJ_G0021765) #23	Stx19 (MGP_SPRETEiJ_G0021764) #24	Arl13b (MGP_SPRETEiJ_G0021763) #25	Nsun3 (MGP_SPRETEiJ_G0021762) #27	Epha6 (MGP_SPRETEiJ_G0021761)	Arl6 (MGP_SPRETEiJ_G0021760)	MGP_SPRETEiJ_G0021759	Riox2 (MGP_SPRETEiJ_G0021758)	Gabrr3 (MGP_SPRETEiJ_G0021757)	Or5ac24 (MGP_SPRETEiJ_G0021756)	Or5ac25 (MGP_SPRETEiJ_G0021755)	MGP_SPRETEiJ_G0021754	MGP_SPRETEiJ_G0021753	Or5ac20 (MGP_SPRETEiJ_G0021752)	MGP_SPRETEiJ_G0021751
Mouse	MODERN SPECIES	7	Rbm11 (ENSMUSG00000032940)	Lipi (ENSMUSG00000032948)	Robo2 (ENSMUSG00000052516)	Robo1 (ENSMUSG00000022883)	Gbe1 (ENSMUSG00000022707)	Speer2 (ENSMUSG00000063163)	Cadm2 (ENSMUSG00000064115)	Vgll3 (ENSMUSG00000091243)	Chmp2b (ENSMUSG00000004843)	Pou1f1 (ENSMUSG00000004842)	Htr1f (ENSMUSG00000050783) #15	Cggbp1 (ENSMUSG00000054604) #17	Zfp654 (ENSMUSG00000047141) #18	4930453N24Rik (ENSMUSG00000059920) #19	Csnka2ip (ENSMUSG00000068167) #21	Epha3 (ENSMUSG00000052504) #22	Pros1 (ENSMUSG00000022912) #23	Stx19 (ENSMUSG00000047854) #24	Arl13b (ENSMUSG00000022911) #25	Nsun3 (ENSMUSG00000050312) #27	Epha6 (ENSMUSG00000055540)	Arl6 (ENSMUSG00000022722)	Crybg3 (ENSMUSG00000022723)	Riox2 (ENSMUSG00000022724)	Gabrr3 (ENSMUSG00000074991)	Or5ac25 (ENSMUSG00000095706)	Or5ac24 (ENSMUSG00000066257)	Or5ac23 (ENSMUSG00000094422)	Or5ac22 (ENSMUSG00000095928)	Or5ac21 (ENSMUSG00000068182)	Or5ac20 (ENSMUSG00000048810)
Ryukyu mouse	MODERN SPECIES	7	Rbm11 (MGP_CAROLIEiJ_G0020874)	Lipi (MGP_CAROLIEiJ_G0020873)	Robo2 (MGP_CAROLIEiJ_G0020872)	Robo1 (MGP_CAROLIEiJ_G0020871)	Gbe1 (MGP_CAROLIEiJ_G0020870)	MGP_CAROLIEiJ_G0020869	Cadm2 (MGP_CAROLIEiJ_G0020868)	Vgll3 (MGP_CAROLIEiJ_G0020867)	Chmp2b (MGP_CAROLIEiJ_G0020866)	Pou1f1 (MGP_CAROLIEiJ_G0020865)	Htr1f (MGP_CAROLIEiJ_G0020864) #15	Cggbp1 (MGP_CAROLIEiJ_G0020863) #17	MGP_CAROLIEiJ_G0020862 #18	4930453N24Rik (MGP_CAROLIEiJ_G0020861) #19	MGP_CAROLIEiJ_G0020860 #21	Epha3 (MGP_CAROLIEiJ_G0020859) #22	Pros1 (MGP_CAROLIEiJ_G0020858) #23	Stx19 (MGP_CAROLIEiJ_G0020857) #24	Arl13b (MGP_CAROLIEiJ_G0020856) #25	Nsun3 (MGP_CAROLIEiJ_G0020855) #27	Epha6 (MGP_CAROLIEiJ_G0020854)	Arl6 (MGP_CAROLIEiJ_G0020853)	MGP_CAROLIEiJ_G0020852	Riox2 (MGP_CAROLIEiJ_G0020851)	Gabrr3 (MGP_CAROLIEiJ_G0020850)	Or5ac24 (MGP_CAROLIEiJ_G0020849)	MGP_CAROLIEiJ_G0020848	MGP_CAROLIEiJ_G0020847	Or5ac16 (MGP_CAROLIEiJ_G0020846)	Or5h26 (MGP_CAROLIEiJ_G0020845)	Or5k3 (MGP_CAROLIEiJ_G0020844)
Shrew mouse	MODERN SPECIES	3	Hspa13 (MGP_PahariEiJ_G0016579)	Rbm11 (MGP_PahariEiJ_G0016578)	MGP_PahariEiJ_G0016577	Robo2 (MGP_PahariEiJ_G0016576)	Robo1 (MGP_PahariEiJ_G0016575)	Gbe1 (MGP_PahariEiJ_G0016574)	Cadm2 (MGP_PahariEiJ_G0016573)	Vgll3 (MGP_PahariEiJ_G0016572)	Chmp2b (MGP_PahariEiJ_G0016571)	Pou1f1 (MGP_PahariEiJ_G0016570)	Htr1f (MGP_PahariEiJ_G0016569) #15	Cggbp1 (MGP_PahariEiJ_G0016568) #17	MGP_PahariEiJ_G0016567 #18	4930453N24Rik (MGP_PahariEiJ_G0016566) #19	MGP_PahariEiJ_G0016565 #21	Epha3 (MGP_PahariEiJ_G0016564) #22	Pros1 (MGP_PahariEiJ_G0016563) #23	Stx19 (MGP_PahariEiJ_G0016562) #24	Arl13b (MGP_PahariEiJ_G0016561) #25	Nsun3 (MGP_PahariEiJ_G0016560) #27	Epha6 (MGP_PahariEiJ_G0016559)	MGP_PahariEiJ_G0016558	MGP_PahariEiJ_G0016557	Riox2 (MGP_PahariEiJ_G0016556)	Gabrr3 (MGP_PahariEiJ_G0016555)	Or5ac25 (MGP_PahariEiJ_G0016554)	Or5ac24 (MGP_PahariEiJ_G0016553)	MGP_PahariEiJ_G0016552	MGP_PahariEiJ_G0016551	MGP_PahariEiJ_G0016550	MGP_PahariEiJ_G0016548
Rat	MODERN SPECIES	2	Gbe1 (ENSRNOG00000051232)	ENSRNOG00000062450	ENSRNOG00000064853	Cadm2 (ENSRNOG00000030840)	ENSRNOG00000069664	Vgll3 (ENSRNOG00000028774)	AABR07033047.1 (ENSRNOG00000050286)	AABR07033045.1 (ENSRNOG00000000713)	Chmp2b (ENSRNOG00000040257)	Pou1f1 (ENSRNOG00000000715)	Htr1f (ENSRNOG00000000716) #15	Cggbp1 (ENSRNOG00000000718) #17	Zfp654 (ENSRNOG00000029956) #18	C11h3orf38 (ENSRNOG00000000720) #19	Csnka2ip (ENSRNOG00000068003) #21	Epha3 (ENSRNOG00000030285) #22	Pros1 (ENSRNOG00000048723) #23	Stx19 (ENSRNOG00000070368) #24	Arl13b (ENSRNOG00000047194) #25
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.b.a.b.e.a	ENSGT01090000260017.c.b.a.b.a.b.e.b
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b.sd #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.a.a	ENSGT01090000260017.c.b.a.b.b.r.a.b.b	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.b.a.b.e.a	ENSGT01090000260017.c.b.a.b.a.b.e.b
Golden Hamster	MODERN SPECIES	682										ENSMAUG00000016675	Htr1f (ENSMAUG00000006269) #15	Cggbp1 (ENSMAUG00000000993) #17	Zfp654 (ENSMAUG00000000720) #18	ENSMAUG00000012990 #19	Csnka2ip (ENSMAUG00000001425) #21	Epha3 (ENSMAUG00000011923) #22	ENSMAUG00000020620 #23	Stx19 (ENSMAUG00000004341) #24	Arl13b (ENSMAUG00000017043) #25	Nsun3 (ENSMAUG00000013661) #27	ENSMAUG00000000427	Epha6 (ENSMAUG00000005573)	Arl6 (ENSMAUG00000016932)	ENSMAUG00000003633	Riox2 (ENSMAUG00000015559)	Gabrr3 (ENSMAUG00000002909)	ENSMAUG00000014628	ENSMAUG00000020049	ENSMAUG00000003355	ENSMAUG00000009870	Or5h22 (ENSMAUG00000016059)
Chinese hamster chok1gshd	MODERN SPECIES	382	Robo2 (ENSCGRG00001016343)	Robo1 (ENSCGRG00001016390)	ENSCGRG00001011950	Gbe1 (ENSCGRG00001024765)	Cadm2 (ENSCGRG00001010982)	Vgll3 (ENSCGRG00001015980)	Chmp2b (ENSCGRG00001022834)	Pou1f1 (ENSCGRG00001011471)	ENSCGRG00001022071	ENSCGRG00001017747	Htr1f (ENSCGRG00001010649) #15	Cggbp1 (ENSCGRG00001010279) #17	Zfp654 (ENSCGRG00001020292) #18	4930453N24Rik (ENSCGRG00001015042) #19	Csnka2ip (ENSCGRG00001014750) #21	Epha3 (ENSCGRG00001006199) #22	ENSCGRG00001009587 #23	Stx19 (ENSCGRG00001001896) #24	Arl13b (ENSCGRG00001022552) #25	Nsun3 (ENSCGRG00001013850) #27	ENSCGRG00001011827	ENSCGRG00001023290	ENSCGRG00001018957	ENSCGRG00001010094	Arl6 (ENSCGRG00001021791)	ENSCGRG00001006924	ENSCGRG00001021101	Gabrr3 (ENSCGRG00001012824)	Or5ac25 (ENSCGRG00001004546)	ENSCGRG00001004066	ENSCGRG00001009832
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT00940000156365 #25	ENSGT01050000244948.c.a #24	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r.a.a	ENSGT01090000260017.c.b.b.c.b.h	ENSGT01090000260017.c.b.a.a.k.a.b.a	ENSGT01090000260017.c.b.a.a.k.b.a	ENSGT01090000260017.c.b.a.a.k.a.a.b	ENSGT01090000260017.c.b.a.b.a.b.e.a
Prairie vole	MODERN SPECIES	7	Robo1 (ENSMOCG00000012004)	ENSMOCG00000002617	Gbe1 (ENSMOCG00000014132)	ENSMOCG00000002638	Cadm2 (ENSMOCG00000005664)	ENSMOCG00000001418	Vgll3 (ENSMOCG00000002854)	Chmp2b (ENSMOCG00000017221)	Pou1f1 (ENSMOCG00000021592)	Htr1f (ENSMOCG00000001706) #15	Cggbp1 (ENSMOCG00000008622) #17	Zfp654 (ENSMOCG00000015545) #18	4930453N24Rik (ENSMOCG00000017673) #19	ENSMOCG00000020136	Csnka2ip (ENSMOCG00000021636) #21	Epha3 (ENSMOCG00000001171) #22	Pros1 (ENSMOCG00000007118) #23	Arl13b (ENSMOCG00000015922) #25	Stx19 (ENSMOCG00000016404) #24	Nsun3 (ENSMOCG00000017349) #27	Epha6 (ENSMOCG00000002313)	Arl6 (ENSMOCG00000022581)	ENSMOCG00000005759	Riox2 (ENSMOCG00000021075)	Gabrr3 (ENSMOCG00000000879)	ENSMOCG00000022288	ENSMOCG00000017758	ENSMOCG00000009618	ENSMOCG00000022005	ENSMOCG00000009340	ENSMOCG00000012334
Northern American deer mouse	MODERN SPECIES	3	Robo2 (ENSPEMG00000016316)	Robo1 (ENSPEMG00000009052)	ENSPEMG00000014520	ENSPEMG00000027253	Gbe1 (ENSPEMG00000013730)	Cadm2 (ENSPEMG00000013822)	ENSPEMG00000028698	Vgll3 (ENSPEMG00000024260)	Chmp2b (ENSPEMG00000021780)	Pou1f1 (ENSPEMG00000020986)	Htr1f (ENSPEMG00000007260) #15	Cggbp1 (ENSPEMG00000030922) #17	Zfp654 (ENSPEMG00000010590) #18	4930453N24Rik (ENSPEMG00000009356) #19	ENSPEMG00000025327 #21	Epha3 (ENSPEMG00000021373) #22	Pros1 (ENSPEMG00000011653) #23	Stx19 (ENSPEMG00000020390) #24	Arl13b (ENSPEMG00000017809) #25	Nsun3 (ENSPEMG00000018396) #27	ENSPEMG00000014808	Epha6 (ENSPEMG00000010772)	Arl6 (ENSPEMG00000021089)	ENSPEMG00000014782	Riox2 (ENSPEMG00000016949)	Gabrr3 (ENSPEMG00000010323)	ENSPEMG00000024995	ENSPEMG00000027094	ENSPEMG00000014612	ENSPEMG00000027666	ENSPEMG00000030235
Upper Galilee mountains blind mole rat	MODERN SPECIES	777						ENSNGAG00000023156	Cadm2 (ENSNGAG00000004965)	Vgll3 (ENSNGAG00000003374)	Chmp2b (ENSNGAG00000019032)	Pou1f1 (ENSNGAG00000021408)	Htr1f (ENSNGAG00000014106) #15	Cggbp1 (ENSNGAG00000023018) #17	Zfp654 (ENSNGAG00000023561) #18	4930453N24Rik (ENSNGAG00000014091) #19	ENSNGAG00000002527	Epha3 (ENSNGAG00000010567) #22	Pros1 (ENSNGAG00000022921) #23	Arl13b (ENSNGAG00000002155) #25	Stx19 (ENSNGAG00000013780) #24	Nsun3 (ENSNGAG00000015857) #27	ENSNGAG00000013664
Lesser Egyptian jerboa	MODERN SPECIES	99	Rgs5 (ENSJJAG00000015242)	Nuf2 (ENSJJAG00000015135)	ENSJJAG00000017273	ENSJJAG00000018522	Cadm2 (ENSJJAG00000001556)	ENSJJAG00000011025	ENSJJAG00000001124	Vgll3 (ENSJJAG00000008774)	Chmp2b (ENSJJAG00000010165)	Pou1f1 (ENSJJAG00000011761)	Htr1f (ENSJJAG00000013994) #15	Zfp654 (ENSJJAG00000014040) #18	ENSJJAG00000015343	ENSJJAG00000016108 #21	ENSJJAG00000022581	Epha3 (ENSJJAG00000023086) #22	Pros1 (ENSJJAG00000000094) #23	ENSJJAG00000010679 #25	Stx19 (ENSJJAG00000013942) #24	Nsun3 (ENSJJAG00000011783) #27	ENSJJAG00000013966	ENSJJAG00000012956	Arl6 (ENSJJAG00000014206)	ENSJJAG00000014703	Riox2 (ENSJJAG00000017682)	Gabrr3 (ENSJJAG00000018558)	ENSJJAG00000010500	ENSJJAG00000014297	Or5h17 (ENSJJAG00000014061)	ENSJJAG00000015091	ENSJJAG00000019450
Kangaroo rat	MODERN SPECIES	392						Gbe1 (ENSDORG00000012473)	Cadm2 (ENSDORG00000001291)	ENSDORG00000025518	Vgll3 (ENSDORG00000012784)	Chmp2b (ENSDORG00000016032)	Pou1f1 (ENSDORG00000016030)	Htr1f (ENSDORG00000009973) #15	Cggbp1 (ENSDORG00000024826) #17	Zfp654 (ENSDORG00000010609) #18	4930453N24Rik (ENSDORG00000023462) #19	Epha3 (ENSDORG00000003956) #22	Pros1 (ENSDORG00000023647) #23	Arl13b (ENSDORG00000006144) #25	Stx19 (ENSDORG00000024286) #24	ENSDORG00000028021	ENSDORG00000028388	ENSDORG00000009251	ENSDORG00000023722	Arl6 (ENSDORG00000009252)	ENSDORG00000026198	Riox2 (ENSDORG00000006620)	Gabrr3 (ENSDORG00000006621)	ENSDORG00000025384	ENSDORG00000011655	Gpr15 (ENSDORG00000004342)	Cpox (ENSDORG00000014882)
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000162802	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT00940000156365 #25	ENSGT01050000244948.c.a #24	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.a.b.h	ENSGT01090000260017.c.b.a.b.a.b.g	ENSGT01090000260017.c.b.a.a.k.a.b	ENSGT01090000260017.c.b.a.a.k.b.a	ENSGT01090000260017.c.b.a.a.k.a.a.b
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000162802	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT00940000156365 #25	ENSGT01050000244948.c.a #24	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.a.b.h.a	ENSGT01090000260017.c.b.a.b.a.b.h.b	ENSGT01090000260017.c.b.a.b.a.b.g	ENSGT01090000260017.c.b.a.a.k.a.b	ENSGT01090000260017.c.b.a.a.k.b.a
Marmotini	ANCESTRAL SPECIES	13	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000154531.ab	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.a.b.h.a	ENSGT01090000260017.c.b.a.b.a.b.h.b	ENSGT01090000260017.c.b.a.b.a.b.g	ENSGT01090000260017.c.b.a.a.k.a.b	ENSGT01090000260017.c.b.a.a.k.b.a
Marmotini_b	ANCESTRAL SPECIES	237						ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000154531.ab	ENSGT00940000157088 #22
Arctic ground squirrel	MODERN SPECIES	130						CADM2 (ENSUPAG00010021780)	VGLL3 (ENSUPAG00010021778)	CHMP2B (ENSUPAG00010021776)	POU1F1 (ENSUPAG00010021765)	HTR1F (ENSUPAG00010021762) #15	ENSUPAG00010021761 #17	ZNF654 (ENSUPAG00010021757) #18	C3orf38 (ENSUPAG00010021754) #19	ENSUPAG00010021753 #21	ENSUPAG00010021752	EPHA3 (ENSUPAG00010021738) #22
Squirrel	MODERN SPECIES	210							CADM2 (ENSSTOG00000013608)	VGLL3 (ENSSTOG00000009434)	CHMP2B (ENSSTOG00000011456)	POU1F1 (ENSSTOG00000011463)	HTR1F (ENSSTOG00000003728) #15	CGGBP1 (ENSSTOG00000027013) #17	ZNF654 (ENSSTOG00000024555) #18	C3orf38 (ENSSTOG00000014875) #19	ENSSTOG00000034915	EPHA3 (ENSSTOG00000014898) #22
Alpin marmot	MODERN SPECIES	4	ROBO2 (ENSMMMG00000016742)	ROBO1 (ENSMMMG00000016683)	GBE1 (ENSMMMG00000016601)	ENSMMMG00000016590	CADM2 (ENSMMMG00000016461)	ENSMMMG00000016452	VGLL3 (ENSMMMG00000016444)	CHMP2B (ENSMMMG00000016432)	POU1F1 (ENSMMMG00000016382)	HTR1F (ENSMMMG00000016369) #15	CGGBP1 (ENSMMMG00000016367) #17	ZNF654 (ENSMMMG00000016352) #18	C3orf38 (ENSMMMG00000016338) #19	ENSMMMG00000016331 #21	ENSMMMG00000016329	EPHA3 (ENSMMMG00000016294) #22	ENSMMMG00000016279	PROS1 (ENSMMMG00000016259) #23	STX19 (ENSMMMG00000016256) #24	ARL13B (ENSMMMG00000016230) #25	ENSMMMG00000016190	EPHA6 (ENSMMMG00000016032)	ARL6 (ENSMMMG00000015952)	ENSMMMG00000015934	RIOX2 (ENSMMMG00000015909)	GABRR3 (ENSMMMG00000015898)	ENSMMMG00000015892	ENSMMMG00000015888	ENSMMMG00000015884	ENSMMMG00000015864	ENSMMMG00000015859
Eurasian red squirrel	MODERN SPECIES	1	ROBO1 (ENSSVLG00005018820)	ENSSVLG00005019248	GBE1 (ENSSVLG00005019519)	ENSSVLG00005019648	ENSSVLG00005019667	CADM2 (ENSSVLG00005011324)	VGLL3 (ENSSVLG00005011630)	ENSSVLG00005011686	POU1F1 (ENSSVLG00005011862)	ENSSVLG00005012054	HTR1F (ENSSVLG00005012072) #15	ENSSVLG00005012096 #17	ZNF654 (ENSSVLG00005012126) #18	ENSSVLG00005012217 #19	ENSSVLG00005012271 #21	EPHA3 (ENSSVLG00005012314) #22	ENSSVLG00005012746	PROS1 (ENSSVLG00005012814) #23	ARL13B (ENSSVLG00005012937) #25	ENSSVLG00005013029 #24	NSUN3 (ENSSVLG00005013136) #27	ENSSVLG00005013214	ENSSVLG00005013290	ENSSVLG00005013345	ENSSVLG00005013423	ENSSVLG00005013472	ENSSVLG00005013503	EPHA6 (ENSSVLG00005013877)	ARL6 (ENSSVLG00005014235)	CRYBG3 (ENSSVLG00005014314)	ENSSVLG00005014532
Hystricomorpha	ANCESTRAL SPECIES	18	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT00940000156365 #25	ENSGT01050000244948.c.a #24	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.a.k.a.b	ENSGT01090000260017.c.b.a.a.k.b.a	ENSGT01090000260017.c.b.a.a.k.a.a.b.d	ENSGT01090000260017.c.b.a.a.k.a.a.b.c	ENSGT01090000260017.c.b.b.c.a	ENSGT01090000260017.c.b.b.d
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT00940000156365 #25	ENSGT01050000244948.c.a #24	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00940000157806	ENSGT00890000139503	ENSGT00870000136493.c	ENSGT00940000161940	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00390000017040	ENSGT00940000155947	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00390000017898 #17	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT00940000156365 #25	ENSGT01050000244948.c.a #24	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906
Long-tailed chinchilla	MODERN SPECIES	114	HSPA13 (ENSCLAG00000005707)	RBM11 (ENSCLAG00000005374)	LIPI (ENSCLAG00000005197)	ROBO2 (ENSCLAG00000004623)	ENSCLAG00000009848	ROBO1 (ENSCLAG00000015477)	GBE1 (ENSCLAG00000005860)	CADM2 (ENSCLAG00000004950)	VGLL3 (ENSCLAG00000004309)	CHMP2B (ENSCLAG00000004251)	POU1F1 (ENSCLAG00000008895)	HTR1F (ENSCLAG00000008847) #15	ENSCLAG00000010225 #17	ZNF654 (ENSCLAG00000009137) #18	C3orf38 (ENSCLAG00000008911) #19	EPHA3 (ENSCLAG00000008216) #22	ENSCLAG00000007467	PROS1 (ENSCLAG00000006656) #23	ARL13B (ENSCLAG00000006379) #25	STX19 (ENSCLAG00000005443) #24	NSUN3 (ENSCLAG00000004168) #27	ENSCLAG00000007975	EPHA6 (ENSCLAG00000012297)	ARL6 (ENSCLAG00000011788)	CRYBG3 (ENSCLAG00000007113)	RIOX2 (ENSCLAG00000006223)	GABRR3 (ENSCLAG00000006076)
Degu	MODERN SPECIES	107	ENSODEG00000010452	METTL18 (ENSODEG00000011388)	ENSODEG00000011249	SCYL3 (ENSODEG00000011505)	ENSODEG00000013130	ENSODEG00000011891	CADM2 (ENSODEG00000011473)	VGLL3 (ENSODEG00000011694)	ENSODEG00000011212	POU1F1 (ENSODEG00000012134)	ENSODEG00000020112	HTR1F (ENSODEG00000019966) #15	ZNF654 (ENSODEG00000012225) #18	C3orf38 (ENSODEG00000015138) #19	ENSODEG00000014399	EPHA3 (ENSODEG00000014135) #22	PROS1 (ENSODEG00000012245) #23	STX19 (ENSODEG00000019968) #24	ARL13B (ENSODEG00000011381) #25	NSUN3 (ENSODEG00000010462) #27
Guinea pig	MODERN SPECIES	34	SAMSN1 (ENSCPOG00000006019)	HSPA13 (ENSCPOG00000007860)	RBM11 (ENSCPOG00000005309)	LIPI (ENSCPOG00000039776)	ROBO2 (ENSCPOG00000012716)	ROBO1 (ENSCPOG00000010039)	GBE1 (ENSCPOG00000006294)	CADM2 (ENSCPOG00000009902)	VGLL3 (ENSCPOG00000024214)	CHMP2B (ENSCPOG00000038857)	POU1F1 (ENSCPOG00000006596)	CGGBP1 (ENSCPOG00000033764) #17	ZNF654 (ENSCPOG00000013512) #18	C3orf38 (ENSCPOG00000007963) #19	ENSCPOG00000023944 #21	EPHA3 (ENSCPOG00000004938) #22	PROS1 (ENSCPOG00000000725) #23	ARL13B (ENSCPOG00000002558) #25	STX19 (ENSCPOG00000002561) #24	NSUN3 (ENSCPOG00000034439) #27	ENSCPOG00000034571	ENSCPOG00000026024
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000037292	VGLL3 (ENSHGLG00000000912)	ENSHGLG00000050433	CHMP2B (ENSHGLG00000000954)	POU1F1 (ENSHGLG00000001001)	ENSHGLG00000032647	ENSHGLG00000047444	ENSHGLG00000001380	ENSHGLG00000032052	ENSHGLG00000042763 #15	CGGBP1 (ENSHGLG00000034659) #17	ZNF654 (ENSHGLG00000001844) #18	ENSHGLG00000037445	C3orf38 (ENSHGLG00000002435) #19	ENSHGLG00000041404	EPHA3 (ENSHGLG00000003586) #22	ENSHGLG00000038748	PROS1 (ENSHGLG00000042539) #23	ENSHGLG00000047498	STX19 (ENSHGLG00000047716) #24	ARL13B (ENSHGLG00000003881) #25	ENSHGLG00000043587	NSUN3 (ENSHGLG00000006224) #27	ENSHGLG00000045668	ENSHGLG00000047628	EPHA6 (ENSHGLG00000012887)	ARL6 (ENSHGLG00000048582)	CRYBG3 (ENSHGLG00000001387)	ENSHGLG00000034916	MINA (ENSHGLG00000003242)	ENSHGLG00000045303
Lagomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157962	ENSGT00390000007999	ENSGT00490000044737	ENSGT00940000157806	ENSGT00890000139503	ENSGT00940000162802	ENSGT00940000156324	ENSGT00940000154477.i	ENSGT00530000063353.a.b.b	ENSGT00950000182832.B	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a #15	ENSGT00950000183034.A #18	ENSGT00390000000367 #19	ENSGT00390000012239 #21	ENSGT00940000157088 #22	ENSGT00940000154035.b #23	ENSGT01050000244948.c.a #24	ENSGT00940000156365 #25	ENSGT00940000153665.b.a.a #27	ENSGT00940000154490.b	ENSGT00940000156459	ENSGT00940000160816	ENSGT00390000000083.b	ENSGT00940000159906	ENSGT01090000260017.c.b.a.b.b.r	ENSGT01090000260017.c.b.a.b.b.q	ENSGT01090000260017.c.b.a.a	ENSGT01090000260017.c.b.b.c.b	ENSGT01090000260017.c.b.b.c.a	ENSGT01090000260017.c.b.b.d.s
Rabbit	MODERN SPECIES	5	ENSOCUG00000022949	ENSOCUG00000037817	CADM2 (ENSOCUG00000001739)	ENSOCUG00000038220	VGLL3 (ENSOCUG00000020895)	CHMP2B (ENSOCUG00000003985)	POU1F1 (ENSOCUG00000017779)	HTR1F (ENSOCUG00000027917) #15	ENSOCUG00000025046	ENSOCUG00000007037	ZNF654 (ENSOCUG00000004967) #18	C3orf38 (ENSOCUG00000014034) #19	ENSOCUG00000031707	ENSOCUG00000026380 #21	ENSOCUG00000024255	EPHA3 (ENSOCUG00000010465) #22	PROS1 (ENSOCUG00000025358) #23	STX19 (ENSOCUG00000001785) #24	ARL13B (ENSOCUG00000025555) #25	NSUN3 (ENSOCUG00000011677) #27	ENSOCUG00000013576	ENSOCUG00000037233	ENSOCUG00000036085	ENSOCUG00000035896	ENSOCUG00000037792	EPHA6 (ENSOCUG00000029519)	ARL6 (ENSOCUG00000029293)	CRYBG3 (ENSOCUG00000012874)	RIOX2 (ENSOCUG00000010223)	GABRR3 (ENSOCUG00000005850)	ENSOCUG00000035864
Pika	MODERN SPECIES	734																EPHA3 (ENSOPRG00000005628) #22