Murinae	ANCESTRAL SPECIES	8	ENSGT00940000154800.ab	ENSGT00390000009189	ENSGT00950000182836.a #7	ENSGT00940000160921 #9	ENSGT00940000158182 #10	ENSGT00940000159274 #11	ENSGT00950000183114.a.a #12	ENSGT00950000182886.b.a #13	ENSGT00390000006408.r ##14	ENSGT00390000008808	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #23	ENSGT00940000158843 #24	ENSGT00440000037341.a #25	ENSGT00940000160910 #28	ENSGT00390000017627.a #29	ENSGT00940000159330 #30	ENSGT00950000183095.a.b.a.b.b #31	ENSGT00390000006205.a #32	ENSGT00440000039029 #33	ENSGT00940000160736 #34	ENSGT00940000159084 #35	ENSGT00500000045333 #37	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Rat	MODERN SPECIES	16	Lclat1 (ENSRNOG00000034026) #7	Fam241b-ps1 (ENSRNOG00000051000) #8	Capn13 (ENSRNOG00000032375) #9	Galnt14 (ENSRNOG00000007951) #10	Ehd3 (ENSRNOG00000007744) #11	Xdh (ENSRNOG00000007081) #12	Srd5a2 (ENSRNOG00000027042) #13	Memo1 (ENSRNOG00000006340) #14	Dpy30 (ENSRNOG00000027126) #15	ENSRNOG00000066517 #16	Spast (ENSRNOG00000027136) #17	Slc30a6 (ENSRNOG00000005856) #18	Nlrc4 (ENSRNOG00000005810) #19	Yipf4 (ENSRNOG00000005610) #20	Birc6 (ENSRNOG00000027191) #21	Ttc27 (ENSRNOG00000042932) #22	Ltbp1 (ENSRNOG00000033090) #23	Rasgrp3 (ENSRNOG00000032703) #24	Fam98a (ENSRNOG00000030328) #25	ENSRNOG00000062904 #26	ENSRNOG00000067489 #27	Crim1 (ENSRNOG00000004208) #28	Fez2 (ENSRNOG00000004577) #29	Vit (ENSRNOG00000004706) #30	Strn (ENSRNOG00000004806) #31	Heatr5b (ENSRNOG00000025926) #32	Gpatch11 (ENSRNOG00000025317) #33	Eif2ak2 (ENSRNOG00000048315) #34	Sult6b1 (ENSRNOG00000049335) #35	ENSRNOG00000066755 #36	Cebpzos (ENSRNOG00000064368) #37
Mus	ANCESTRAL SPECIES	16	ENSGT00940000154800.ab	ENSGT00390000009189	ENSGT00950000182836.a #7	ENSGT00940000160921 #9	ENSGT00940000158182 #10	ENSGT00940000159274 #11	ENSGT00950000183114.a.a #12	ENSGT00950000182886.b.a #13	ENSGT00390000006408.r ##14	ENSGT00390000008808	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #23	ENSGT00940000158843 #24	ENSGT00440000037341.a #25	ENSGT00940000160910 #28	ENSGT00390000017627.a #29	ENSGT00940000159330 #30	ENSGT00950000183095.a.b.a.b.b #31	ENSGT00390000006205.a #32	ENSGT00440000039029 #33	ENSGT00940000160736 #34	ENSGT00940000159084 #35	ENSGT00500000045333 #37	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Shrew mouse	MODERN SPECIES	9	Alk (MGP_PahariEiJ_G0020852)	Lbh (MGP_PahariEiJ_G0020853)	Lclat1 (MGP_PahariEiJ_G0020854) #7	MGP_PahariEiJ_G0020855 #9	Galnt14 (MGP_PahariEiJ_G0020856) #10	Ehd3 (MGP_PahariEiJ_G0020857) #11	Xdh (MGP_PahariEiJ_G0020858) #12	Srd5a2 (MGP_PahariEiJ_G0020859) #13	Memo1 (MGP_PahariEiJ_G0020860) ##14	Dpy30 (MGP_PahariEiJ_G0020861)	MGP_PahariEiJ_G0020862 #17	Slc30a6 (MGP_PahariEiJ_G0020863) #18	Nlrc4 (MGP_PahariEiJ_G0020864) #19	Yipf4 (MGP_PahariEiJ_G0020865) #20	Birc6 (MGP_PahariEiJ_G0020866) #21	MGP_PahariEiJ_G0020867 #22	Ltbp1 (MGP_PahariEiJ_G0020868) #23	Rasgrp3 (MGP_PahariEiJ_G0020869) #24	Fam98a (MGP_PahariEiJ_G0020870) #25	Crim1 (MGP_PahariEiJ_G0020871) #28	Fez2 (MGP_PahariEiJ_G0020872) #29	Vit (MGP_PahariEiJ_G0020873) #30	Strn (MGP_PahariEiJ_G0020874) #31	Heatr5b (MGP_PahariEiJ_G0020875) #32	Gpatch11 (MGP_PahariEiJ_G0020876) #33	Eif2ak2 (MGP_PahariEiJ_G0020877) #34	Sult6b1 (MGP_PahariEiJ_G0020878) #35	Cebpzos (MGP_PahariEiJ_G0020879) #37	MGP_PahariEiJ_G0020880	Ndufaf7 (MGP_PahariEiJ_G0020881)	Prkd3 (MGP_PahariEiJ_G0020882)
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000154800.ab	ENSGT00390000009189	ENSGT00950000182836.a #7	ENSGT00940000160921 #9	ENSGT00940000158182 #10	ENSGT00940000159274 #11	ENSGT00950000183114.a.a #12	ENSGT00950000182886.b.a #13	ENSGT00390000006408.r ##14	ENSGT00390000008808	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #23	ENSGT00940000158843 #24	ENSGT00440000037341.a #25	ENSGT00940000160910 #28	ENSGT00390000017627.a #29	ENSGT00940000159330 #30	ENSGT00950000183095.a.b.a.b.b #31	ENSGT00390000006205.a #32	ENSGT00440000039029 #33	ENSGT00940000160736 #34	ENSGT00940000159084 #35	ENSGT00500000045333.o #37	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Ryukyu mouse	MODERN SPECIES	8	Alk (MGP_CAROLIEiJ_G0021865)	Lbh (MGP_CAROLIEiJ_G0021866)	Lclat1 (MGP_CAROLIEiJ_G0021867) #7	Capn13 (MGP_CAROLIEiJ_G0021868) #9	Galnt14 (MGP_CAROLIEiJ_G0021869) #10	Ehd3 (MGP_CAROLIEiJ_G0021870) #11	Xdh (MGP_CAROLIEiJ_G0021871) #12	Srd5a2 (MGP_CAROLIEiJ_G0021872) #13	Memo1 (MGP_CAROLIEiJ_G0021873) ##14	Dpy30 (MGP_CAROLIEiJ_G0021874)	Spast (MGP_CAROLIEiJ_G0021875) #17	MGP_CAROLIEiJ_G0021876 #18	Nlrc4 (MGP_CAROLIEiJ_G0021877) #19	Yipf4 (MGP_CAROLIEiJ_G0021878) #20	Birc6 (MGP_CAROLIEiJ_G0021879) #21	Ttc27 (MGP_CAROLIEiJ_G0021880) #22	Ltbp1 (MGP_CAROLIEiJ_G0021881) #23	Rasgrp3 (MGP_CAROLIEiJ_G0021882) #24	Fam98a (MGP_CAROLIEiJ_G0021883) #25	Crim1 (MGP_CAROLIEiJ_G0021884) #28	Fez2 (MGP_CAROLIEiJ_G0021885) #29	Strn (MGP_CAROLIEiJ_G0021886) #31	MGP_CAROLIEiJ_G0021887 #32	Gpatch11 (MGP_CAROLIEiJ_G0021888) #33	Eif2ak2 (MGP_CAROLIEiJ_G0021889) #34	Cebpzos (MGP_CAROLIEiJ_G0021890) #37	MGP_CAROLIEiJ_G0021891	MGP_CAROLIEiJ_G0021892	Prkd3 (MGP_CAROLIEiJ_G0021893)	Qpct (MGP_CAROLIEiJ_G0021894)	Cdc42ep3 (MGP_CAROLIEiJ_G0021895)
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000154800.ab	ENSGT00390000009189	ENSGT00950000182836.a #7	ENSGT00940000160921 #9	ENSGT00940000158182 #10	ENSGT00940000159274 #11	ENSGT00950000183114.a.a #12	ENSGT00950000182886.b.a #13	ENSGT00390000006408.r ##14	ENSGT00390000008808	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #23	ENSGT00940000158843 #24	ENSGT00440000037341.a #25	ENSGT00940000160910 #28	ENSGT00390000017627.a #29	ENSGT00940000159330 #30	ENSGT00950000183095.a.b.a.b.b #31	ENSGT00390000006205.a #32	ENSGT00440000039029 #33	ENSGT00940000160736 #34	ENSGT00940000159084 #35	ENSGT00500000045333.o #37	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Mouse	MODERN SPECIES	8	Ypel5 (ENSMUSG00000039770)	Lbh (ENSMUSG00000024063)	Lclat1 (ENSMUSG00000054469) #7	Capn13 (ENSMUSG00000043705) #9	Galnt14 (ENSMUSG00000024064) #10	Ehd3 (ENSMUSG00000024065) #11	Xdh (ENSMUSG00000024066) #12	Srd5a2 (ENSMUSG00000038541) #13	Memo1 (ENSMUSG00000058704) ##14	Dpy30 (ENSMUSG00000024067)	Spast (ENSMUSG00000024068) #17	Slc30a6 (ENSMUSG00000024069) #18	Nlrc4 (ENSMUSG00000039193) #19	Yipf4 (ENSMUSG00000024072) #20	Birc6 (ENSMUSG00000024073) #21	Ttc27 (ENSMUSG00000024078) #22	Ltbp1 (ENSMUSG00000001870) #23	Rasgrp3 (ENSMUSG00000071042) #24	Fam98a (ENSMUSG00000002017) #25	Crim1 (ENSMUSG00000024074) #28	Fez2 (ENSMUSG00000056121) #29	Vit (ENSMUSG00000024076) #30	Strn (ENSMUSG00000024077) #31	Heatr5b (ENSMUSG00000039414) #32	Gpatch11 (ENSMUSG00000050668) #33	Eif2ak2 (ENSMUSG00000024079) #34	Sult6b1 (ENSMUSG00000038045) #35	Cebpzos (ENSMUSG00000062691) #37	Cebpz (ENSMUSG00000024081)	Ndufaf7 (ENSMUSG00000024082)	Prkd3 (ENSMUSG00000024070)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00390000009189	ENSGT00950000182836.a #7	ENSGT00940000160921 #9	ENSGT00940000158182 #10	ENSGT00940000159274 #11	ENSGT00950000183114.a.a #12	ENSGT00950000182886.b.a #13	ENSGT00390000006408.q.b #14	ENSGT00390000006408.r ##14	ENSGT00390000008808	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #23	ENSGT00940000158843 #24	ENSGT00440000037341.a #25	ENSGT00940000160910 #28	ENSGT00390000017627.a #29	ENSGT00940000159330 #30	ENSGT00950000183095.a.b.a.b.b #31	ENSGT00390000006205.a #32	ENSGT00440000039029 #33	ENSGT00940000160736 #34	ENSGT00940000159084 #35	ENSGT00500000045333.o #37	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
spretus	MODERN SPECIES	8	Ypel5 (MGP_SPRETEiJ_G0022777)	Lbh (MGP_SPRETEiJ_G0022778)	Lclat1 (MGP_SPRETEiJ_G0022779) #7	Capn13 (MGP_SPRETEiJ_G0022780) #9	Galnt14 (MGP_SPRETEiJ_G0022781) #10	Ehd3 (MGP_SPRETEiJ_G0022782) #11	Xdh (MGP_SPRETEiJ_G0022783) #12	Srd5a2 (MGP_SPRETEiJ_G0022784) #13	Memo1 (MGP_SPRETEiJ_G0022785) #14	Dpy30 (MGP_SPRETEiJ_G0022786)	Spast (MGP_SPRETEiJ_G0022787) #17	Slc30a6 (MGP_SPRETEiJ_G0022788) #18	Nlrc4 (MGP_SPRETEiJ_G0022789) #19	Yipf4 (MGP_SPRETEiJ_G0022790) #20	Birc6 (MGP_SPRETEiJ_G0022791) #21	Ttc27 (MGP_SPRETEiJ_G0022792) #22	Ltbp1 (MGP_SPRETEiJ_G0022793) #23	Rasgrp3 (MGP_SPRETEiJ_G0022794) #24	Fam98a (MGP_SPRETEiJ_G0022795) #25	Crim1 (MGP_SPRETEiJ_G0022796) #28	Fez2 (MGP_SPRETEiJ_G0022797) #29	Vit (MGP_SPRETEiJ_G0022798) #30	Strn (MGP_SPRETEiJ_G0022799) #31	Heatr5b (MGP_SPRETEiJ_G0022800) #32	Gpatch11 (MGP_SPRETEiJ_G0022801) #33	Eif2ak2 (MGP_SPRETEiJ_G0022803) #34	Sult6b1 (MGP_SPRETEiJ_G0022804) #35	Cebpzos (MGP_SPRETEiJ_G0022805) #37	Cebpz (MGP_SPRETEiJ_G0022806)	Ndufaf7 (MGP_SPRETEiJ_G0022807)	Prkd3 (MGP_SPRETEiJ_G0022808)
Steppe mouse	MODERN SPECIES	2949			Galnt14 (ENSMSIG00000017578) #10	Ehd3 (ENSMSIG00000017648) #11	ENSMSIG00000017664 ##13	Xdh (ENSMSIG00000017693) #12	Srd5a2 (ENSMSIG00000022711) #13	ENSMSIG00000022729	ENSMSIG00000022739 ##14	Dpy30 (ENSMSIG00000022833)	ENSMSIG00000022859 #17	Slc30a6 (ENSMSIG00000023266) #18	Nlrc4 (ENSMSIG00000023326) #19	Yipf4 (ENSMSIG00000023337) #20	Birc6 (ENSMSIG00000023387) #21	ENSMSIG00000024707 #22	ENSMSIG00000024781