Bovidae	ANCESTRAL SPECIES	5	ENSGT01030000234575.d.c	ENSGT00440000033552	ENSGT00940000159299 #7	ENSGT00940000160058 #8	ENSGT00390000006707.q.e #10	ENSGT00950000183114.a.a #11	ENSGT00950000182886.b.a #14	ENSGT00390000006408 #15	ENSGT00390000008808.o #16	ENSGT01050000245125	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #24	ENSGT00940000158843 #25	ENSGT00440000037341.a #26	ENSGT00940000160910 #30	ENSGT00390000017627.a.l #31	ENSGT00940000159330 #32	ENSGT00950000183095.a.b.a.b.b #33	ENSGT00390000006205.a #34	ENSGT00440000039029 #35	ENSGT00940000160736 #36	ENSGT00940000159084 #37	ENSGT00500000045333.c	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Caprinae	ANCESTRAL SPECIES	9	ENSGT00440000033552	ENSGT00940000159299 #7	ENSGT00940000160058 #8	ENSGT00950000182945.b.b.kb #9	ENSGT00390000006707.q.e.c #10	ENSGT00950000183114.a.a #11	ENSGT00950000182886.b.a #14	ENSGT00390000006408 #15	ENSGT00390000008808.o #16	ENSGT01050000245125	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00900000143268	ENSGT00940000155823.B #24	ENSGT00940000158843 #25	ENSGT00440000037341.a.q #26	ENSGT00390000002398.e.a #28	ENSGT00390000004323.b.d #29	ENSGT00940000160910 #30	ENSGT00390000017627.a.l #31	ENSGT00940000159330 #32	ENSGT00950000183095.a.b.a.b.b #33	ENSGT00390000006205.a #34	ENSGT00440000039029 #35	ENSGT00940000160736 #36	ENSGT00940000159084 #37	ENSGT00500000045333.c
Rambouillet Sheep	MODERN SPECIES	19	ADD2 (ENSOARG00020005142) #7	TGFA (ENSOARG00020005087) #8	ENSOARG00020005077 #9	ENSOARG00020005043 #10	XDH (ENSOARG00020004988) #11	ENSOARG00020004969 #12	ENSOARG00020004948 #13	SRD5A2 (ENSOARG00020004906) #14	MEMO1 (ENSOARG00020004857) #15	ENSOARG00020004831 #16	SPAST (ENSOARG00020004331) #17	SLC30A6 (ENSOARG00020004173) #18	NLRC4 (ENSOARG00020004057) #19	YIPF4 (ENSOARG00020004030) #20	BIRC6 (ENSOARG00020002705) #21	TTC27 (ENSOARG00020002552) #22	TMOD3 (ENSOARG00020002535) #23	LTBP1 (ENSOARG00020001760) #24	RASGRP3 (ENSOARG00020001625) #25	FAM98A (ENSOARG00020001602) #26	ENSOARG00020001591 #27	ENSOARG00020001574 #28	ENSOARG00020001564 #29	CRIM1 (ENSOARG00020001496) #30	FEZ2 (ENSOARG00020001452) #31	VIT (ENSOARG00020001384) #32	STRN (ENSOARG00020001325) #33	HEATR5B (ENSOARG00020001045) #34	GPATCH11 (ENSOARG00020000953) #35	eIF2aK2 (ENSOARG00020000891) #36	SULT6B1 (ENSOARG00020000852) #37
Goat	MODERN SPECIES	2	ADD2 (ENSCHIG00000016487) #7	TGFA (ENSCHIG00000018063) #8	ENSCHIG00000013552 #9	ENSCHIG00000009384	ENSCHIG00000015553 ##10	XDH (ENSCHIG00000017276) #11	SRD5A2 (ENSCHIG00000025648) #14	MEMO1 (ENSCHIG00000006439) #15	ENSCHIG00000021755 #16	ENSCHIG00000021921	SPAST (ENSCHIG00000015378) #17	SLC30A6 (ENSCHIG00000024551) #18	NLRC4 (ENSCHIG00000012340) #19	YIPF4 (ENSCHIG00000026569) #20	BIRC6 (ENSCHIG00000008751) #21	TTC27 (ENSCHIG00000017374) #22	ENSCHIG00000022577	ENSCHIG00000008282	LTBP1 (ENSCHIG00000024351) #24	RASGRP3 (ENSCHIG00000008963) #25	ENSCHIG00000026285 #26	ENSCHIG00000009886 #28	ENSCHIG00000022305 #29	ENSCHIG00000021473	CRIM1 (ENSCHIG00000010023) #30	FEZ2 (ENSCHIG00000023554) #31	VIT (ENSCHIG00000013685) #32	STRN (ENSCHIG00000024807) #33	HEATR5B (ENSCHIG00000024849) #34	GPATCH11 (ENSCHIG00000010173) #35	EIF2AK2 (ENSCHIG00000016319) #36
Bovinae	ANCESTRAL SPECIES	4	ENSGT00440000033552	ENSGT00940000159299 #7	ENSGT00940000160058 #8	ENSGT00940000153544.a.h.h.a	ENSGT00390000006707.q.e #10	ENSGT00950000183114.a.a #11	ENSGT00950000182886.b.a #14	ENSGT00390000006408 #15	ENSGT00390000018085.a.a.a.a	ENSGT00390000008808.o #16	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #24	ENSGT00940000158843 #25	ENSGT00440000037341.a #26	ENSGT00940000160910 #30	ENSGT00390000017627.a.l #31	ENSGT00940000159330 #32	ENSGT00950000183095.a.b.a.b.b #33	ENSGT00390000006205.a #34	ENSGT00440000039029 #35	ENSGT00940000160736 #36	ENSGT00940000159084 #37	ENSGT00500000045333.c	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
American bison	MODERN SPECIES	3359	ADD2 (ENSBBBG00000018738) #7	TGFA (ENSBBBG00000004652) #8	ENSBBBG00000018670	ENSBBBG00000018665 #10	XDH (ENSBBBG00000004637) #11	SRD5A2 (ENSBBBG00000018622) #14	MEMO1 (ENSBBBG00000004617) #15	ENSBBBG00000018606	DPY30 (ENSBBBG00000018596) #16	SPAST (ENSBBBG00000018580) #17	SLC30A6 (ENSBBBG00000004502) #18	NLRC4 (ENSBBBG00000018278) #19	ENSBBBG00000018209	YIPF4 (ENSBBBG00000018202) #20	BIRC6 (ENSBBBG00000007953) #21	TTC27 (ENSBBBG00000018084) #22	LTBP1 (ENSBBBG00000008605) #24	RASGRP3 (ENSBBBG00000017819) #25	ENSBBBG00000017779 #26
Bos	ANCESTRAL SPECIES	5	ENSGT00940000159299 #7	ENSGT00940000160058 #8	ENSGT00940000153544.a.h.h.a	ENSGT00390000006707.q.e.a #10	ENSGT00950000183114.a.a #11	ENSGT00950000182886.b.a #14	ENSGT00390000006408 #15	ENSGT00390000018085.a.a.a.a	ENSGT00390000008808.o #16	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT01100000263480.a.a.a.b.a.a.b.a.b.d	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #24	ENSGT00940000158843 #25	ENSGT00440000037341.a #26	ENSGT00940000160910 #30	ENSGT00390000017627.a.l #31	ENSGT00940000159330 #32	ENSGT00950000183095.a.b.a.b.b #33	ENSGT00390000006205.a #34	ENSGT00440000039029 #35	ENSGT00940000160736 #36	ENSGT00940000159084 #37	ENSGT00500000045333.c	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Bos_b	ANCESTRAL SPECIES	9	ENSGT00940000160058 #8	ENSGT00940000153544.a.h.h.a	ENSGT00390000006707.q.e.a #10	ENSGT00950000183114.a.a #11	ENSGT00950000182886.b.a #14	ENSGT00390000006408 #15	ENSGT00390000018085.a.a.a.a	ENSGT00390000008808.o #16	ENSGT00960000192911	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT01100000263480.a.a.a.b.a.a.b.a.b.d	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #24	ENSGT00940000158843 #25	ENSGT00440000037341.a #26	ENSGT00940000160910 #30	ENSGT00390000017627.a.l #31	ENSGT00940000159330 #32	ENSGT00950000183095.a.b.a.b.b #33	ENSGT00390000006205.a #34	ENSGT00440000039029 #35	ENSGT00940000160736 #36	ENSGT00940000159084 #37	ENSGT00500000045333.c	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Cow	MODERN SPECIES	2	TGFA (ENSBTAG00000000783) #8	ENSBTAG00000050557	FAM136A (ENSBTAG00000008674) #10	XDH (ENSBTAG00000012519) #11	SRD5A2 (ENSBTAG00000003108) #14	MEMO1 (ENSBTAG00000007734) #15	ENSBTAG00000033887	DPY30 (ENSBTAG00000009246) #16	ENSBTAG00000049576	SPAST (ENSBTAG00000021694) #17	SLC30A6 (ENSBTAG00000010898) #18	NLRC4 (ENSBTAG00000008223) #19	ENSBTAG00000048521	YIPF4 (ENSBTAG00000033041) #20	BIRC6 (ENSBTAG00000027932) #21	TTC27 (ENSBTAG00000033010) #22	LTBP1 (ENSBTAG00000019839) #24	RASGRP3 (ENSBTAG00000008006) #25	FAM98A (ENSBTAG00000008548) #26	CRIM1 (ENSBTAG00000009020) #30	FEZ2 (ENSBTAG00000009021) #31	VIT (ENSBTAG00000024980) #32	STRN (ENSBTAG00000018590) #33	HEATR5B (ENSBTAG00000014310) #34	GPATCH11 (ENSBTAG00000003861) #35	EIF2AK2 (ENSBTAG00000008703) #36	SULT6B1 (ENSBTAG00000008707) #37	CEBPZOS (ENSBTAG00000048620)	CEBPZ (ENSBTAG00000039770)	ENSBTAG00000053553	NDUFAF7 (ENSBTAG00000001113)
Hybrid Bos Indicus	MODERN SPECIES	2	TGFA (ENSBIXG00005005243) #8	ENSBIXG00005005230	ENSBIXG00005029167 #10	XDH (ENSBIXG00005001800) #11	SRD5A2 (ENSBIXG00005029151) #14	MEMO1 (ENSBIXG00005029136) #15	ENSBIXG00005005164	DPY30 (ENSBIXG00005001910) #16	ENSBIXG00005029093	SPAST (ENSBIXG00005029066) #17	SLC30A6 (ENSBIXG00005028953) #18	NLRC4 (ENSBIXG00005028892) #19	ENSBIXG00005028871	YIPF4 (ENSBIXG00005005021) #20	BIRC6 (ENSBIXG00005004979) #21	TTC27 (ENSBIXG00005004829) #22	ENSBIXG00005004813	LTBP1 (ENSBIXG00005027924) #24	RASGRP3 (ENSBIXG00005027420) #25	FAM98A (ENSBIXG00005027360) #26	CRIM1 (ENSBIXG00005027259) #30	FEZ2 (ENSBIXG00005027203) #31	VIT (ENSBIXG00005027172) #32	STRN (ENSBIXG00005027070) #33	HEATR5B (ENSBIXG00005027000) #34	GPATCH11 (ENSBIXG00005026952) #35	EIF2AK2 (ENSBIXG00005026919) #36	SULT6B1 (ENSBIXG00005026883) #37	CEBPZOS (ENSBIXG00005004585)	CEBPZ (ENSBIXG00005026806)	NDUFAF7 (ENSBIXG00005026788)
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000159299 #7	ENSGT00940000160058 #8	ENSGT00940000153544.a.h.h.a	ENSGT00390000006707.q.e.a #10	ENSGT00950000183114.a.a #11	ENSGT00950000182886.b.a #14	ENSGT00390000006408 #15	ENSGT00390000018085.a.a.a.a	ENSGT00390000008808.o #16	ENSGT00940000156258 #17	ENSGT00940000159934 #18	ENSGT00940000161744 #19	ENSGT01100000263480.a.a.a.b.a.a.b.a.b.d	ENSGT00940000153168.B #20	ENSGT00940000156126 #21	ENSGT00500000044929 #22	ENSGT00940000155823.B #24	ENSGT00940000158843 #25	ENSGT00440000037341.a #26	ENSGT00940000160910 #30	ENSGT00390000017627.a.l #31	ENSGT00940000159330 #32	ENSGT00950000183095.a.b.a.b.b #33	ENSGT00390000006205.a #34	ENSGT00440000039029 #35	ENSGT00940000160736 #36	ENSGT00940000159084 #37	ENSGT00500000045333.c	ENSGT00390000006395	ENSGT00390000001588	ENSGT00950000183024.a.a.b
Domestic yak	MODERN SPECIES	28	TGFA (ENSBGRG00000005915) #8	ENSBGRG00000005992	ENSBGRG00000006016 #10	XDH (ENSBGRG00000006054) #11	SRD5A2 (ENSBGRG00000006337) #14	MEMO1 (ENSBGRG00000006376) #15	ENSBGRG00000006453	DPY30 (ENSBGRG00000006469) #16	SPAST (ENSBGRG00000006533) #17	SLC30A6 (ENSBGRG00000006930) #18	NLRC4 (ENSBGRG00000007270) #19	ENSBGRG00000007439	YIPF4 (ENSBGRG00000007460) #20	ENSBGRG00000007493	BIRC6 (ENSBGRG00000007523) #21	TTC27 (ENSBGRG00000008248) #22	LTBP1 (ENSBGRG00000008349) #24	RASGRP3 (ENSBGRG00000009656) #25	FAM98A (ENSBGRG00000009878) #26	ENSBGRG00000010017	ENSBGRG00000010037	CRIM1 (ENSBGRG00000010106) #30	FEZ2 (ENSBGRG00000010380) #31	VIT (ENSBGRG00000010677) #32	ENSBGRG00000011169	STRN (ENSBGRG00000011227) #33	HEATR5B (ENSBGRG00000011970) #34	GPATCH11 (ENSBGRG00000012327) #35	EIF2AK2 (ENSBGRG00000012523) #36	SULT6B1 (ENSBGRG00000012966) #37	ENSBGRG00000013124
Wild yak	MODERN SPECIES	529							SRD5A2 (ENSBMUG00000018690) #14	MEMO1 (ENSBMUG00000018676) #15	ENSBMUG00000018656	DPY30 (ENSBMUG00000018644) #16	SPAST (ENSBMUG00000018612) #17	SLC30A6 (ENSBMUG00000018549) #18	NLRC4 (ENSBMUG00000018499) #19	YIPF4 (ENSBMUG00000018479) #20	BIRC6 (ENSBMUG00000018438) #21	TTC27 (ENSBMUG00000018379) #22	LTBP1 (ENSBMUG00000018095) #24	RASGRP3 (ENSBMUG00000017681) #25	FAM98A (ENSBMUG00000017629) #26