Mus	ANCESTRAL SPECIES	23	ENSGT00940000155394 #8	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #9	ENSGT00940000157713 #10	ENSGT00940000154980 #11	ENSGT00530000063074.b.b #12	ENSGT00940000156622 #13	ENSGT00390000002417 #14	ENSGT00940000153362.a #15	ENSGT00440000039564.b #16	ENSGT00390000018775 #17	ENSGT00940000160727 #18	ENSGT00940000162357 #20	ENSGT00940000162547 #19	ENSGT00940000159670 #21	ENSGT00940000157371 #22	ENSGT00940000162576 #23	ENSGT00940000155878 #25	ENSGT00950000182885.A.b #26	ENSGT00940000156429.x #27	ENSGT00940000156786 #28	ENSGT00390000017998 #29	ENSGT00940000161088 #30	ENSGT00390000001116 #31	ENSGT00800000125327 #33	ENSGT00940000160214 #32	ENSGT00940000158153 #34	ENSGT00940000161565.b #36	ENSGT00940000157212.B #35	ENSGT00940000156088 #37	ENSGT00950000183039.A
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000155394 #8	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #9	ENSGT00940000157713 #10	ENSGT00940000154980 #11	ENSGT00530000063074.b.b #12	ENSGT00940000156622 #13	ENSGT00390000002417 #14	ENSGT00940000153362.a #15	ENSGT00440000039564.b #16	ENSGT00390000018775 #17	ENSGT00940000160727 #18	ENSGT00940000162357 #20	ENSGT00940000162547 #19	ENSGT00940000159670 #21	ENSGT00940000157371 #22	ENSGT00940000162576 #23	ENSGT00900000143684 #24	ENSGT00940000155878 #25	ENSGT00950000182885.A.b #26	ENSGT00940000156429.x #27	ENSGT00940000156786 #28	ENSGT00390000017998 #29	ENSGT00940000161088 #30	ENSGT00390000001116 #31	ENSGT00940000160214 #32	ENSGT00800000125327 #33	ENSGT00940000158153 #34	ENSGT00940000161565.b #36	ENSGT00940000157212.B #35	ENSGT00940000156088 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #9	ENSGT00940000157713 #10	ENSGT00940000154980 #11	ENSGT00530000063074.b.b #12	ENSGT00940000156622 #13	ENSGT00390000002417 #14	ENSGT00940000153362.a #15	ENSGT00440000039564.b #16	ENSGT00390000018775 #17	ENSGT00940000160727 #18	ENSGT00940000162547.i.a #19	ENSGT00940000162357 #20	ENSGT00940000162547.i.b ##19	ENSGT00940000159670 #21	ENSGT00940000157371 #22	ENSGT00940000162576 #23	ENSGT00900000143684 #24	ENSGT00940000155878 #25	ENSGT00950000182885.A.b #26	ENSGT00940000156429.x #27	ENSGT00940000156786 #28	ENSGT00390000017998 #29	ENSGT00940000161088 #30	ENSGT00390000001116 #31	ENSGT00940000160214 #32	ENSGT00800000125327 #33	ENSGT00940000158153 #34	ENSGT00940000161565.b #36	ENSGT00940000157212.B #35	ENSGT00940000156088 #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000000406 #7	ENSGT00940000155394 #8	ENSGT00940000158014 #9	ENSGT00940000157713 #10	ENSGT00940000154980 #11	ENSGT00530000063074.b.b #12	ENSGT00940000156622 #13	ENSGT00390000002417 #14	ENSGT00940000153362.a #15	ENSGT00440000039564.b #16	ENSGT00390000018775 #17	ENSGT00940000160727 #18	ENSGT00940000162547.i.a #19	ENSGT00940000162357 #20	ENSGT00940000159670 #21	ENSGT00940000157371 #22	ENSGT00940000162576 #23	ENSGT00900000143684 #24	ENSGT00940000155878 #25	ENSGT00950000182885.A.b #26	ENSGT00940000156429.x #27	ENSGT00940000156786 #28	ENSGT00390000017998 #29	ENSGT00940000161088 #30	ENSGT00390000001116 #31	ENSGT00940000160214 #32	ENSGT00800000125327 #33	ENSGT00940000158153 #34	ENSGT00940000161565.b #36	ENSGT00940000157212.B #35	ENSGT00940000156088 #37
spretus	MODERN SPECIES	1	Pawr (MGP_SPRETEiJ_G0016612) #7	Syt1 (MGP_SPRETEiJ_G0016613) #8	Nav3 (MGP_SPRETEiJ_G0016614) #9	E2f7 (MGP_SPRETEiJ_G0016615) #10	Csrp2 (MGP_SPRETEiJ_G0016616) #11	Zdhhc17 (MGP_SPRETEiJ_G0016617) #12	Osbpl8 (MGP_SPRETEiJ_G0016618) #13	Bbs10 (MGP_SPRETEiJ_G0016619) #14	Nap1l1 (MGP_SPRETEiJ_G0016620) #15	Phlda1 (MGP_SPRETEiJ_G0016621) #16	Krr1 (MGP_SPRETEiJ_G0016622) #17	Glipr1 (MGP_SPRETEiJ_G0016623) #18	MGP_SPRETEiJ_G0016624 #19	MGP_SPRETEiJ_G0016625 #20	MGP_SPRETEiJ_G0016626 #21	Kcnc2 (MGP_SPRETEiJ_G0016627) #22	Atxn7l3b (MGP_SPRETEiJ_G0016628) #23	MGP_SPRETEiJ_G0016629 #24	Trhde (MGP_SPRETEiJ_G0016630) #25	Tph2 (MGP_SPRETEiJ_G0016631) #26	Tbc1d15 (MGP_SPRETEiJ_G0016632) #27	Rab21 (MGP_SPRETEiJ_G0016633) #28	Tmem19 (MGP_SPRETEiJ_G0016634) #29	Thap2 (MGP_SPRETEiJ_G0016635) #30	Zfc3h1 (MGP_SPRETEiJ_G0016636) #31	Lgr5 (MGP_SPRETEiJ_G0016637) #32	MGP_SPRETEiJ_G0016638 #33	Tspan8 (MGP_SPRETEiJ_G0016639) #34	Ptprr (MGP_SPRETEiJ_G0016640) #35	MGP_SPRETEiJ_G0016641 #36	Ptprb (MGP_SPRETEiJ_G0016642) #37
Steppe mouse	MODERN SPECIES	3161																Kcnc2 (ENSMSIG00000008403) #22	ENSMSIG00000008516	Atxn7l3b (ENSMSIG00000008525) #23	mt-Nd4l (ENSMSIG00000008535)	Trhde (ENSMSIG00000008548) #25	ENSMSIG00000008634
Mouse	MODERN SPECIES	1	Brcc3dc (ENSMUSG00000112039)	Nav3 (ENSMUSG00000020181) #9	E2f7 (ENSMUSG00000020185) #10	Csrp2 (ENSMUSG00000020186) #11	Zdhhc17 (ENSMUSG00000035798) #12	Osbpl8 (ENSMUSG00000020189) #13	Bbs10 (ENSMUSG00000035759) #14	Nap1l1 (ENSMUSG00000058799) #15	Phlda1 (ENSMUSG00000020205) #16	Krr1 (ENSMUSG00000063334) #17	Glipr1 (ENSMUSG00000056888) #18	Glipr1l1 (ENSMUSG00000020213) #19	Glipr1l2 (ENSMUSG00000020214) #20	Glipr1l3 (ENSMUSG00000112611) ##19	Caps2 (ENSMUSG00000035694) #21	Kcnc2 (ENSMUSG00000035681) #22	Atxn7l3b (ENSMUSG00000074748) #23	Trhde (ENSMUSG00000050663) #25	Tph2 (ENSMUSG00000006764) #26	Tbc1d15 (ENSMUSG00000020130) #27	Rab21 (ENSMUSG00000020132) #28	Tmem19 (ENSMUSG00000069520) #29	Thap2 (ENSMUSG00000020137) #30	Zfc3h1 (ENSMUSG00000034163) #31	Lgr5 (ENSMUSG00000020140) #32	A930009A15Rik (ENSMUSG00000092210) #33	Tspan8 (ENSMUSG00000034127) #34	Ptprr (ENSMUSG00000020151) #35	Ptprb (ENSMUSG00000020154) #37	Kcnmb4 (ENSMUSG00000054934)	Cnot2 (ENSMUSG00000020166)
Ryukyu mouse	MODERN SPECIES	1	MGP_CAROLIEiJ_G0015790 #7	Syt1 (MGP_CAROLIEiJ_G0015791) #8	Nav3 (MGP_CAROLIEiJ_G0015792) #9	E2f7 (MGP_CAROLIEiJ_G0015793) #10	Csrp2 (MGP_CAROLIEiJ_G0015794) #11	Zdhhc17 (MGP_CAROLIEiJ_G0015795) #12	Osbpl8 (MGP_CAROLIEiJ_G0015796) #13	Bbs10 (MGP_CAROLIEiJ_G0015797) #14	Nap1l1 (MGP_CAROLIEiJ_G0015798) #15	Phlda1 (MGP_CAROLIEiJ_G0015799) #16	Krr1 (MGP_CAROLIEiJ_G0015800) #17	Glipr1 (MGP_CAROLIEiJ_G0015801) #18	Glipr1l2 (MGP_CAROLIEiJ_G0015802) #20	MGP_CAROLIEiJ_G0015803 #19	Caps2 (MGP_CAROLIEiJ_G0015804) #21	Kcnc2 (MGP_CAROLIEiJ_G0015805) #22	Atxn7l3b (MGP_CAROLIEiJ_G0015806) #23	MGP_CAROLIEiJ_G0015807 #24	Trhde (MGP_CAROLIEiJ_G0015808) #25	Tph2 (MGP_CAROLIEiJ_G0015809) #26	Tbc1d15 (MGP_CAROLIEiJ_G0015810) #27	Rab21 (MGP_CAROLIEiJ_G0015811) #28	Tmem19 (MGP_CAROLIEiJ_G0015812) #29	Thap2 (MGP_CAROLIEiJ_G0015813) #30	Zfc3h1 (MGP_CAROLIEiJ_G0015814) #31	Lgr5 (MGP_CAROLIEiJ_G0015815) #32	MGP_CAROLIEiJ_G0015816 #33	Tspan8 (MGP_CAROLIEiJ_G0015817) #34	Ptprr (MGP_CAROLIEiJ_G0015818) #35	MGP_CAROLIEiJ_G0015819 #36	Ptprb (MGP_CAROLIEiJ_G0015820) #37
Shrew mouse	MODERN SPECIES	22	Pawr (MGP_PahariEiJ_G0031297) #7	Syt1 (MGP_PahariEiJ_G0031296) #8	MGP_PahariEiJ_G0031295 #9	E2f7 (MGP_PahariEiJ_G0031294) #10	Csrp2 (MGP_PahariEiJ_G0031293) #11	Zdhhc17 (MGP_PahariEiJ_G0031292) #12	Osbpl8 (MGP_PahariEiJ_G0031291) #13	Bbs10 (MGP_PahariEiJ_G0031290) #14	MGP_PahariEiJ_G0031289 #15	Phlda1 (MGP_PahariEiJ_G0031288) #16	Krr1 (MGP_PahariEiJ_G0031287) #17	Glipr1 (MGP_PahariEiJ_G0031286) #18	Glipr1l2 (MGP_PahariEiJ_G0031285) #20	MGP_PahariEiJ_G0031284 #19	Caps2 (MGP_PahariEiJ_G0031283) #21	Kcnc2 (MGP_PahariEiJ_G0031282) #22	Atxn7l3b (MGP_PahariEiJ_G0031281) #23	MGP_PahariEiJ_G0031280	Trhde (MGP_PahariEiJ_G0031279) #25	Tph2 (MGP_PahariEiJ_G0031278) #26	Tbc1d15 (MGP_PahariEiJ_G0031277) #27	Rab21 (MGP_PahariEiJ_G0031276) #28	Tmem19 (MGP_PahariEiJ_G0031275) #29	Thap2 (MGP_PahariEiJ_G0031274) #30	Zfc3h1 (MGP_PahariEiJ_G0031273) #31	MGP_PahariEiJ_G0031272 #33	Lgr5 (MGP_PahariEiJ_G0031271) #32	Tspan8 (MGP_PahariEiJ_G0031270) #34	MGP_PahariEiJ_G0031269 #36	Ptprr (MGP_PahariEiJ_G0031268) #35	Ptprb (MGP_PahariEiJ_G0031267) #37