Amniota	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Mammalia	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Theria	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.D
Eutheria	ANCESTRAL SPECIES	5	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Primates	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Cebidae	ANCESTRAL SPECIES	32	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a.h #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196.m #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a.h #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A.a.b
Capuchin	MODERN SPECIES	112	PKNOX1 (ENSCCAG00000022902) #7	ENSCCAG00000022392 #8	WDR4 (ENSCCAG00000022755) #9	PDE9A (ENSCCAG00000001044) #10	ENSCCAG00000033172 #11	SLC37A1 (ENSCCAG00000033553) #12	RSPH1 (ENSCCAG00000029158) #13	UBASH3A (ENSCCAG00000029676) #14	TMPRSS3 (ENSCCAG00000038076) #15	TFF1 (ENSCCAG00000022303) #16	TFF2 (ENSCCAG00000022205) #17	TFF3 (ENSCCAG00000022195) #18	ABCG1 (ENSCCAG00000022414) #19	UMODL1 (ENSCCAG00000028529) #20	ENSCCAG00000030168 #21	ZBTB21 (ENSCCAG00000037414) #22	ENSCCAG00000029556 #23	PRDM15 (ENSCCAG00000030489) #24	RIPK4 (ENSCCAG00000029896) #25	TMPRSS2 (ENSCCAG00000030906) #26	MX1 (ENSCCAG00000025192) #27	ENSCCAG00000020180 #28	MX2 (ENSCCAG00000029612) #29	FAM3B (ENSCCAG00000030600) #30	BACE2 (ENSCCAG00000035482) #31	ENSCCAG00000015027 #32
Marmoset	MODERN SPECIES	13	CBS (ENSCJAG00000015824)	PKNOX1 (ENSCJAG00000040086) #7	NDUFV3 (ENSCJAG00000015786) #8	WDR4 (ENSCJAG00000015778) #9	PDE9A (ENSCJAG00000085834) #10	SLC37A1 (ENSCJAG00000005291) #12	RSPH1 (ENSCJAG00000005333) #13	UBASH3A (ENSCJAG00000007403) #14	TMPRSS3 (ENSCJAG00000007372) #15	TFF1 (ENSCJAG00000007371) #16	TFF2 (ENSCJAG00000007364) #17	TFF3 (ENSCJAG00000077292) #18	ABCG1 (ENSCJAG00000033076) #19	ENSCJAG00000082919	UMODL1 (ENSCJAG00000007292) #20	ZBTB21 (ENSCJAG00000064368) #22	ENSCJAG00000013827 ##23	PRDM15 (ENSCJAG00000013815) #24	ENSCJAG00000085735	RIPK4 (ENSCJAG00000011251) #25	ENSCJAG00000085605	TMPRSS2 (ENSCJAG00000011236) #26	MX2 (ENSCJAG00000011261) #29	FAM3B (ENSCJAG00000011329) #30	BACE2 (ENSCJAG00000011344) #31	ENSCJAG00000083619	ENSCJAG00000084691	ENSCJAG00000083017	DSCAM (ENSCJAG00000005540)	PCP4 (ENSCJAG00000086635)	ENSCJAG00000083298
Mas night monkey	MODERN SPECIES	1376	ENSANAG00000026034	CBS (ENSANAG00000032848)	PKNOX1 (ENSANAG00000022045) #7	NDUFV3 (ENSANAG00000026013) #8	WDR4 (ENSANAG00000026274) #9	PDE9A (ENSANAG00000037833) #10	SLC37A1 (ENSANAG00000028307) #12	RSPH1 (ENSANAG00000035302) #13	UBASH3A (ENSANAG00000022507) #14	TMPRSS3 (ENSANAG00000030095) #15	TFF1 (ENSANAG00000032792) #16	TFF2 (ENSANAG00000033470) #17	TFF3 (ENSANAG00000033542) #18	ABCG1 (ENSANAG00000025567) #19	UMODL1 (ENSANAG00000030497) #20	ZBTB21 (ENSANAG00000020407) #22	C2CD2 (ENSANAG00000021285) #23	PRDM15 (ENSANAG00000023230) #24	RIPK4 (ENSANAG00000030821) #25	TMPRSS2 (ENSANAG00000031604) #26	MX1 (ENSANAG00000032841) #27	MX2 (ENSANAG00000030389) #29	FAM3B (ENSANAG00000019755) #30	BACE2 (ENSANAG00000020891) #31	ENSANAG00000034923	DSCAM (ENSANAG00000029585)	PCP4 (ENSANAG00000022174)	IGSF5 (ENSANAG00000023294)	SH3BGR (ENSANAG00000033495)	LCA5L (ENSANAG00000036638)	GET1 (ENSANAG00000014374)
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Hominidae	ANCESTRAL SPECIES	25	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Pan	ANCESTRAL SPECIES	27	ENSGT00940000159505.x #7	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00860000136018	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Chimpanzee	MODERN SPECIES	12	PKNOX1 (ENSPTRG00000013950) #7	ERVH48-1 (ENSPTRG00000051369)	NDUFV3 (ENSPTRG00000047245) #8	WDR4 (ENSPTRG00000013948) #9	PDE9A (ENSPTRG00000013946) #10	SLC37A1 (ENSPTRG00000013945) #12	RSPH1 (ENSPTRG00000013944) #13	UBASH3A (ENSPTRG00000013943) #14	TMPRSS3 (ENSPTRG00000013942) #15	TFF1 (ENSPTRG00000013941) #16	TFF2 (ENSPTRG00000013940) #17	TFF3 (ENSPTRG00000013939) #18	ENSPTRG00000046019	ABCG1 (ENSPTRG00000013937) #19	UMODL1 (ENSPTRG00000013936) #20	ZBTB21 (ENSPTRG00000050158) #22	C2CD2 (ENSPTRG00000013932) #23	PRDM15 (ENSPTRG00000013930) #24	RIPK4 (ENSPTRG00000013929) #25	TMPRSS2 (ENSPTRG00000013928) #26	MX1 (ENSPTRG00000013927) #29	FAM3B (ENSPTRG00000013925) #30	BACE2 (ENSPTRG00000013924) #31	DSCAM (ENSPTRG00000013922)	PCP4 (ENSPTRG00000013921)	IGSF5 (ENSPTRG00000013920)	B3GALT5 (ENSPTRG00000052056)	SH3BGR (ENSPTRG00000013917)	LCA5L (ENSPTRG00000013916)	GET1 (ENSPTRG00000013915)	ENSPTRG00000031426
Bonobo	MODERN SPECIES	12	PKNOX1 (ENSPPAG00000027586) #7	ERVH48-1 (ENSPPAG00000006329)	NDUFV3 (ENSPPAG00000016184) #8	WDR4 (ENSPPAG00000038150) #9	PDE9A (ENSPPAG00000027576) #10	SLC37A1 (ENSPPAG00000034205) #12	RSPH1 (ENSPPAG00000032996) #13	UBASH3A (ENSPPAG00000031719) #14	TMPRSS3 (ENSPPAG00000030425) #15	TFF1 (ENSPPAG00000030343) #16	TFF2 (ENSPPAG00000030237) #17	TFF3 (ENSPPAG00000030214) #18	ENSPPAG00000030016	ENSPPAG00000027172 #19	UMODL1 (ENSPPAG00000011906) #20	ZBTB21 (ENSPPAG00000005987) #22	C2CD2 (ENSPPAG00000004421) #23	ENSPPAG00000030922 #24	RIPK4 (ENSPPAG00000027031) #25	TMPRSS2 (ENSPPAG00000018889) #26	ENSPPAG00000000669	MX1 (ENSPPAG00000034486) #27	MX2 (ENSPPAG00000032451) #29	FAM3B (ENSPPAG00000030408) #30	BACE2 (ENSPPAG00000028296) #31	DSCAM (ENSPPAG00000017108)	PCP4 (ENSPPAG00000041210)	B3GALT5 (ENSPPAG00000039797)	ENSPPAG00000037065	LCA5L (ENSPPAG00000036290)	GET1 (ENSPPAG00000034665)
Human	MODERN SPECIES	13	CBS (ENSG00000160200)	PKNOX1 (ENSG00000160199) #7	ERVH48-1 (ENSG00000233056)	NDUFV3 (ENSG00000160194) #8	WDR4 (ENSG00000160193) #9	PDE9A (ENSG00000160191) #10	SLC37A1 (ENSG00000160190) #12	RSPH1 (ENSG00000160188) #13	UBASH3A (ENSG00000160185) #14	TMPRSS3 (ENSG00000160183) #15	TFF1 (ENSG00000160182) #16	TFF2 (ENSG00000160181) #17	TFF3 (ENSG00000160180) #18	ABCG1 (ENSG00000160179) #19	UMODL1 (ENSG00000177398) #20	ZBTB21 (ENSG00000173276) #22	C2CD2 (ENSG00000157617) #23	PRDM15 (ENSG00000141956) #24	RIPK4 (ENSG00000183421) #25	TMPRSS2 (ENSG00000184012) #26	MX1 (ENSG00000157601) #27	MX2 (ENSG00000183486) #29	FAM3B (ENSG00000183844) #30	BACE2 (ENSG00000182240) #31	DSCAM (ENSG00000171587)	PCP4 (ENSG00000183036)	IGSF5 (ENSG00000183067)	B3GALT5 (ENSG00000183778)	SH3BGR (ENSG00000185437)	LCA5L (ENSG00000157578)	GET1-SH3BGR (ENSG00000285815)
Orangutan	MODERN SPECIES	12	ENSPPYG00000041500	PKNOX1 (ENSPPYG00000011461) #7	ERVH48-1 (ENSPPYG00000032563)	NDUFV3 (ENSPPYG00000011459) #8	WDR4 (ENSPPYG00000011458) #9	PDE9A (ENSPPYG00000011457) #10	SLC37A1 (ENSPPYG00000011455) #12	ENSPPYG00000011454 #13	UBASH3A (ENSPPYG00000011453) #14	TMPRSS3 (ENSPPYG00000011452) #15	TFF1 (ENSPPYG00000011451) #16	TFF2 (ENSPPYG00000011450) #17	ENSPPYG00000011449 #18	ABCG1 (ENSPPYG00000011448) #19	UMODL1 (ENSPPYG00000011445) #20	ZBTB21 (ENSPPYG00000011443) #22	C2CD2 (ENSPPYG00000011442) #23	PRDM15 (ENSPPYG00000011441) #24	RIPK4 (ENSPPYG00000011440) #25	TMPRSS2 (ENSPPYG00000011438) #26	MX1 (ENSPPYG00000011437) #27	MX2 (ENSPPYG00000011436) #29	FAM3B (ENSPPYG00000011435) #30	BACE2 (ENSPPYG00000011433) #31	DSCAM (ENSPPYG00000011432)	IGSF5 (ENSPPYG00000011430)	B3GALT5 (ENSPPYG00000011429)	ENSPPYG00000011428	LCA5L (ENSPPYG00000032149)	GET1 (ENSPPYG00000011427)	ENSPPYG00000011426
Gibbon	MODERN SPECIES	17	CBS (ENSNLEG00000029685)	PKNOX1 (ENSNLEG00000014675) #7	ERVH48-1 (ENSNLEG00000027799)	NDUFV3 (ENSNLEG00000014663) #8	WDR4 (ENSNLEG00000014641) #9	PDE9A (ENSNLEG00000014628) #10	SLC37A1 (ENSNLEG00000014623) #12	RSPH1 (ENSNLEG00000014607) #13	UBASH3A (ENSNLEG00000014571) #14	TMPRSS3 (ENSNLEG00000014558) #15	TFF1 (ENSNLEG00000014554) #16	TFF2 (ENSNLEG00000014551) #17	TFF3 (ENSNLEG00000014549) #18	ABCG1 (ENSNLEG00000028849) #19	UMODL1 (ENSNLEG00000014490) #20	ZBTB21 (ENSNLEG00000014479) #22	C2CD2 (ENSNLEG00000033883) #23	PRDM15 (ENSNLEG00000014454) #24	RIPK4 (ENSNLEG00000008693) #25	TMPRSS2 (ENSNLEG00000008677) #26	MX1 (ENSNLEG00000008634) #27	MX2 (ENSNLEG00000008625) #29	FAM3B (ENSNLEG00000008601) #30	ENSNLEG00000008585 #31	DSCAM (ENSNLEG00000028860)	ENSNLEG00000032106	PCP4 (ENSNLEG00000013201)	IGSF5 (ENSNLEG00000013181)	B3GALT5 (ENSNLEG00000013171)	ENSNLEG00000013169	LCA5L (ENSNLEG00000013153)
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00410000028657	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT01000000215029	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00410000028657	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00940000159505.x #7	ENSGT01000000215029.c	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000159505.x #7	ENSGT01000000215029.c	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT01000000215029.c	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00390000011549
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000051957	ENSMFAG00000020678	NDUFV3 (ENSMFAG00000044552) #8	WDR4 (ENSMFAG00000045992) #9	PDE9A (ENSMFAG00000036884) #10	SLC37A1 (ENSMFAG00000036570) #12	RSPH1 (ENSMFAG00000043304) #13	ENSMFAG00000060166	UBASH3A (ENSMFAG00000031488) #14	TMPRSS3 (ENSMFAG00000003673) #15	TFF1 (ENSMFAG00000030916) #16	TFF2 (ENSMFAG00000057433) #17	TFF3 (ENSMFAG00000045102) #18	ABCG1 (ENSMFAG00000035347) #19	UMODL1 (ENSMFAG00000039195) #20	ZBTB21 (ENSMFAG00000000518) #22	C2CD2 (ENSMFAG00000032505) #23	PRDM15 (ENSMFAG00000042871) #24	RIPK4 (ENSMFAG00000044571) #25	ENSMFAG00000063892	MX1 (ENSMFAG00000044214) #27	TMPRSS2 (ENSMFAG00000044952) #26	MX2 (ENSMFAG00000046255) #29	FAM3B (ENSMFAG00000033710) #30	BACE2 (ENSMFAG00000032329) #31	DSCAM (ENSMFAG00000033365)	ENSMFAG00000060227	PCP4 (ENSMFAG00000002748)	ENSMFAG00000052126	IGSF5 (ENSMFAG00000033889)	B3GALT5 (ENSMFAG00000000800)
Rhesus	MODERN SPECIES	13	CBS (ENSMMUG00000009289)	PKNOX1 (ENSMMUG00000009288) #7	ENSMMUG00000044879	NDUFV3 (ENSMMUG00000001553) #8	WDR4 (ENSMMUG00000062729) #9	PDE9A (ENSMMUG00000022107) #10	SLC37A1 (ENSMMUG00000018085) #12	RSPH1 (ENSMMUG00000018084) #13	UBASH3A (ENSMMUG00000018081) #14	TMPRSS3 (ENSMMUG00000018079) #15	TFF1 (ENSMMUG00000050587) #16	TFF2 (ENSMMUG00000064839) #17	TFF3 (ENSMMUG00000062860) #18	ABCG1 (ENSMMUG00000018058) #19	UMODL1 (ENSMMUG00000018057) #20	ZBTB21 (ENSMMUG00000018053) #22	C2CD2 (ENSMMUG00000007030) #23	PRDM15 (ENSMMUG00000018046) #24	RIPK4 (ENSMMUG00000018043) #25	TMPRSS2 (ENSMMUG00000015332) #26	MX1 (ENSMMUG00000015329) #27	MX2 (ENSMMUG00000044257) #29	BACE2 (ENSMMUG00000004257) #31	DSCAM (ENSMMUG00000005174)	PCP4 (ENSMMUG00000041181)	IGSF5 (ENSMMUG00000003427)	B3GALT5 (ENSMMUG00000003428)	GET1 (ENSMMUG00000020654)	LCA5L (ENSMMUG00000010407)	ENSMMUG00000052792	ENSMMUG00000006075
Pig-tailed macaque	MODERN SPECIES	503	PKNOX1 (ENSMNEG00000035609) #7	ERVH48-1 (ENSMNEG00000016913)	NDUFV3 (ENSMNEG00000031842) #8	WDR4 (ENSMNEG00000033682) #9	PDE9A (ENSMNEG00000035281) #10	SLC37A1 (ENSMNEG00000035150) #12	RSPH1 (ENSMNEG00000041436) #13	UBASH3A (ENSMNEG00000030168) #14	TMPRSS3 (ENSMNEG00000034522) #15	TFF1 (ENSMNEG00000040403) #16	TFF2 (ENSMNEG00000043148) #17	TFF3 (ENSMNEG00000044665) #18	ABCG1 (ENSMNEG00000030770) #19	ENSMNEG00000037122	UMODL1 (ENSMNEG00000005265) #20	ZBTB21 (ENSMNEG00000028147) #22	C2CD2 (ENSMNEG00000043656) #23	PRDM15 (ENSMNEG00000041997) #24	RIPK4 (ENSMNEG00000024370) #25	TMPRSS2 (ENSMNEG00000029183) #26	MX1 (ENSMNEG00000032698) #27	MX2 (ENSMNEG00000038461) #29	FAM3B (ENSMNEG00000036712) #30	BACE2 (ENSMNEG00000039867) #31	DSCAM (ENSMNEG00000045567)	PCP4 (ENSMNEG00000043382)	IGSF5 (ENSMNEG00000036150)	B3GALT5 (ENSMNEG00000028563)	SH3BGR (ENSMNEG00000044767)	LCA5L (ENSMNEG00000034779)	GET1 (ENSMNEG00000036276)
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00940000159505.x #7	ENSGT01000000215029.c	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00940000159505.x #7	ENSGT01000000215029.c	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Sooty mangabey	MODERN SPECIES	465	CBS (ENSCATG00000037956)	PKNOX1 (ENSCATG00000033829) #7	ERVH48-1 (ENSCATG00000032142)	NDUFV3 (ENSCATG00000043099) #8	WDR4 (ENSCATG00000042955) #9	PDE9A (ENSCATG00000039788) #10	SLC37A1 (ENSCATG00000031505) #12	RSPH1 (ENSCATG00000037984) #13	UBASH3A (ENSCATG00000028990) #14	TMPRSS3 (ENSCATG00000003510) #15	TFF1 (ENSCATG00000042160) #16	TFF2 (ENSCATG00000002257) #17	TFF3 (ENSCATG00000039028) #18	ABCG1 (ENSCATG00000015933) #19	UMODL1 (ENSCATG00000042383) #20	ZBTB21 (ENSCATG00000031344) #22	C2CD2 (ENSCATG00000041335) #23	PRDM15 (ENSCATG00000034002) #24	RIPK4 (ENSCATG00000044519) #25	TMPRSS2 (ENSCATG00000035193) #26	MX1 (ENSCATG00000036673) #27	MX2 (ENSCATG00000035920) #29	FAM3B (ENSCATG00000039352) #30	ENSCATG00000032305	BACE2 (ENSCATG00000042433) #31	DSCAM (ENSCATG00000016259)	PCP4 (ENSCATG00000043532)	IGSF5 (ENSCATG00000041067)	B3GALT5 (ENSCATG00000039495)	SH3BGR (ENSCATG00000040538)	LCA5L (ENSCATG00000012924)
Drill	MODERN SPECIES	1420	PKNOX1 (ENSMLEG00000037117) #7	ERVH48-1 (ENSMLEG00000001600)	NDUFV3 (ENSMLEG00000042871) #8	WDR4 (ENSMLEG00000042177) #9	PDE9A (ENSMLEG00000027650) #10	SLC37A1 (ENSMLEG00000026776) #12	RSPH1 (ENSMLEG00000030513) #13	UBASH3A (ENSMLEG00000044085) #14	TMPRSS3 (ENSMLEG00000034619) #15	TFF1 (ENSMLEG00000030600) #16	TFF2 (ENSMLEG00000039983) #17	TFF3 (ENSMLEG00000039530) #18	ABCG1 (ENSMLEG00000034812) #19	ENSMLEG00000027543	UMODL1 (ENSMLEG00000036713) #20	ZBTB21 (ENSMLEG00000037203) #22	C2CD2 (ENSMLEG00000043976) #23	PRDM15 (ENSMLEG00000042202) #24	RIPK4 (ENSMLEG00000022911) #25
Olive baboon	MODERN SPECIES	14	ENSPANG00000045532	ERVH48-1 (ENSPANG00000037967)	NDUFV3 (ENSPANG00000020448) #8	WDR4 (ENSPANG00000006022) #9	PDE9A (ENSPANG00000023247) #10	ENSPANG00000038329	SLC37A1 (ENSPANG00000018651) #12	ENSPANG00000039438 #13	UBASH3A (ENSPANG00000006263) #14	TMPRSS3 (ENSPANG00000040739) #15	TFF1 (ENSPANG00000050733) #16	TFF2 (ENSPANG00000008679) #17	TFF3 (ENSPANG00000015993) #18	ABCG1 (ENSPANG00000018700) #19	UMODL1 (ENSPANG00000020446) #20	ZBTB21 (ENSPANG00000000728) #22	C2CD2 (ENSPANG00000025139) #23	PRDM15 (ENSPANG00000006262) #24	RIPK4 (ENSPANG00000022205) #25	TMPRSS2 (ENSPANG00000015992) #26	MX1 (ENSPANG00000023901) #27	MX2 (ENSPANG00000022204) #29	BACE2 (ENSPANG00000007705) #31	DSCAM (ENSPANG00000006261)	PCP4 (ENSPANG00000044834)	IGSF5 (ENSPANG00000033531)	B3GALT5 (ENSPANG00000000557)	ENSPANG00000035786	LCA5L (ENSPANG00000019228)	GET1 (ENSPANG00000017092)	HMGN1 (ENSPANG00000030801)
Vervet Monkey	MODERN SPECIES	11	PKNOX1 (ENSCSAG00000008042) #7	NDUFV3 (ENSCSAG00000008049) #8	WDR4 (ENSCSAG00000008058) #9	PDE9A (ENSCSAG00000008068) #10	ENSCSAG00000008076	SLC37A1 (ENSCSAG00000008088) #12	RSPH1 (ENSCSAG00000008099) #13	UBASH3A (ENSCSAG00000008109) #14	TMPRSS3 (ENSCSAG00000008120) #15	TFF1 (ENSCSAG00000008127) #16	TFF2 (ENSCSAG00000008132) #17	TFF3 (ENSCSAG00000008136) #18	ABCG1 (ENSCSAG00000008143) #19	ENSCSAG00000000278	UMODL1 (ENSCSAG00000008176) #20	ZBTB21 (ENSCSAG00000000279) #22	C2CD2 (ENSCSAG00000008199) #23	PRDM15 (ENSCSAG00000008213) #24	RIPK4 (ENSCSAG00000008221) #25	TMPRSS2 (ENSCSAG00000008229) #26	MX1 (ENSCSAG00000008237) #27	MX2 (ENSCSAG00000008253) #29	FAM3B (ENSCSAG00000008260) #30	BACE2 (ENSCSAG00000008267) #31	ENSCSAG00000000280	ENSCSAG00000008272	DSCAM (ENSCSAG00000008297)	PCP4 (ENSCSAG00000008304)	IGSF5 (ENSCSAG00000008315)	B3GALT5 (ENSCSAG00000018714)	SH3BGR (ENSCSAG00000008320)
Rhinopithecus	ANCESTRAL SPECIES	241	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00860000136018	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25
Golden snub-nosed monkey	MODERN SPECIES	2404	PKNOX1 (ENSRROG00000036545) #7	NDUFV3 (ENSRROG00000029833) #8	WDR4 (ENSRROG00000040334) #9	PDE9A (ENSRROG00000040954) #10	SLC37A1 (ENSRROG00000036324) #12	RSPH1 (ENSRROG00000028683) #13	UBASH3A (ENSRROG00000033109) #14	TMPRSS3 (ENSRROG00000035661) #15	TFF1 (ENSRROG00000029183) #16	TFF2 (ENSRROG00000032376) #17	TFF3 (ENSRROG00000043978) #18	ENSRROG00000041986	ABCG1 (ENSRROG00000045570) #19	ENSRROG00000030472	UMODL1 (ENSRROG00000034007) #20	ZBTB21 (ENSRROG00000031872) #22	C2CD2 (ENSRROG00000009589) #23	ENSRROG00000026949
Black snub-nosed monkey	MODERN SPECIES	1754			NDUFV3 (ENSRBIG00000033466) #8	WDR4 (ENSRBIG00000044014) #9	PDE9A (ENSRBIG00000028089) #10	SLC37A1 (ENSRBIG00000035816) #12	RSPH1 (ENSRBIG00000033428) #13	UBASH3A (ENSRBIG00000039440) #14	TMPRSS3 (ENSRBIG00000008799) #15	TFF1 (ENSRBIG00000032818) #16	TFF2 (ENSRBIG00000037984) #17	TFF3 (ENSRBIG00000039405) #18	ENSRBIG00000041549	ABCG1 (ENSRBIG00000027223) #19	UMODL1 (ENSRBIG00000030886) #20	ZBTB21 (ENSRBIG00000032709) #22	ENSRBIG00000029661	C2CD2 (ENSRBIG00000000891) #23	PRDM15 (ENSRBIG00000014955) #24	RIPK4 (ENSRBIG00000040951) #25
Tarsier	MODERN SPECIES	3105													TFF3 (ENSTSYG00000036572) #18	ABCG1 (ENSTSYG00000004724) #19	UMODL1 (ENSTSYG00000005990) #20	ZBTB21 (ENSTSYG00000033109) #22	C2CD2 (ENSTSYG00000010506) #23
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Lemuriformes_a	ANCESTRAL SPECIES	195	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22
Coquerels sifaka	MODERN SPECIES	797	ENSPCOG00000019191	CBS (ENSPCOG00000018453)	PKNOX1 (ENSPCOG00000017461) #7	ENSPCOG00000016389 #8	WDR4 (ENSPCOG00000025182) #9	PDE9A (ENSPCOG00000011154) #10	SLC37A1 (ENSPCOG00000027538) #12	RSPH1 (ENSPCOG00000000459) #13	UBASH3A (ENSPCOG00000023333) #14	TMPRSS3 (ENSPCOG00000015816) #15	TFF1 (ENSPCOG00000026713) #16	TFF2 (ENSPCOG00000024477) #17	TFF3 (ENSPCOG00000023385) #18	ABCG1 (ENSPCOG00000015593) #19	UMODL1 (ENSPCOG00000022199) #20	ZBTB21 (ENSPCOG00000021545) #22
Mouse lemur	MODERN SPECIES	24	DNMT3L (ENSMICG00000048144)	AIRE (ENSMICG00000034908)	ENSMICG00000046893	PFKL (ENSMICG00000035233)	CFAP410 (ENSMICG00000026921)	TRPM2 (ENSMICG00000012499)	TSPEAR (ENSMICG00000009957)	BACE2 (ENSMICG00000027643) #31	FAM3B (ENSMICG00000012335) #30	MX2 (ENSMICG00000012345) #29	MX1 (ENSMICG00000017322) #27	TMPRSS2 (ENSMICG00000017325) #26	TFF3 (ENSMICG00000015162) #18	ABCG1 (ENSMICG00000015133) #19	UMODL1 (ENSMICG00000016376) #20	ZBTB21 (ENSMICG00000042192) #22	C2CD2 (ENSMICG00000013844) #23	PRDM15 (ENSMICG00000013783) #24	RIPK4 (ENSMICG00000038490) #25	DSCAM (ENSMICG00000042048)	PCP4 (ENSMICG00000015516)	ENSMICG00000028713	B3GALT5 (ENSMICG00000045304)	SH3BGR (ENSMICG00000007755)	ENSMICG00000015813	ENSMICG00000046495	GET1 (ENSMICG00000015808)	ENSMICG00000038583	BRWD1 (ENSMICG00000013213)	PSMG1 (ENSMICG00000000385)	ENSMICG00000027563
Bushbaby	MODERN SPECIES	243	CBS (ENSOGAG00000016500)	PKNOX1 (ENSOGAG00000003664) #7	ENSOGAG00000003661 #8	WDR4 (ENSOGAG00000003658) #9	PDE9A (ENSOGAG00000015745) #10	SLC37A1 (ENSOGAG00000015740) #12	RSPH1 (ENSOGAG00000015738) #13	UBASH3A (ENSOGAG00000015734) #14	TMPRSS3 (ENSOGAG00000014513) #15	TFF1 (ENSOGAG00000032775) #16	TFF2 (ENSOGAG00000014510) #17	TFF3 (ENSOGAG00000014507) #18	ABCG1 (ENSOGAG00000012289) #19	ENSOGAG00000005904 #20	ENSOGAG00000026493	ZBTB21 (ENSOGAG00000014370) #22	C2CD2 (ENSOGAG00000006465) #23	PRDM15 (ENSOGAG00000006444) #24	RIPK4 (ENSOGAG00000015484) #25	TMPRSS2 (ENSOGAG00000009520) #26	MX1 (ENSOGAG00000009515) #27	MX2 (ENSOGAG00000006851) #29	FAM3B (ENSOGAG00000006849) #30	BACE2 (ENSOGAG00000006848) #31	ENSOGAG00000027351	DSCAM (ENSOGAG00000015945)	PCP4 (ENSOGAG00000008491)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Glires	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Lagomorpha	ANCESTRAL SPECIES	505																ENSGT00940000161028 #22	ENSGT00530000063764.a #23
Rabbit	MODERN SPECIES	901																ZBTB21 (ENSOCUG00000003265) #22	C2CD2 (ENSOCUG00000015510) #23
Pika	MODERN SPECIES	2485																ENSOPRG00000006919 #22	ENSOPRG00000006900 #23
Rodentia	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.n.b #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00390000018807	ENSGT00940000159292	ENSGT00940000161104	ENSGT00940000162228
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.n.b #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00390000018807	ENSGT00940000159292	ENSGT00940000161104	ENSGT00940000162228
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.n.b #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00390000018807	ENSGT00940000159292	ENSGT00940000161104	ENSGT00940000162228
Long-tailed chinchilla	MODERN SPECIES	114	CRYAA (ENSCLAG00000008715)	U2AF1 (ENSCLAG00000009589)	CBS (ENSCLAG00000012158)	PKNOX1 (ENSCLAG00000009292) #7	NDUFV3 (ENSCLAG00000010460) #8	WDR4 (ENSCLAG00000004584) #9	PDE9A (ENSCLAG00000005531) #10	SLC37A1 (ENSCLAG00000006046) #12	RSPH1 (ENSCLAG00000005001) #13	UBASH3A (ENSCLAG00000005633) #14	TMPRSS3 (ENSCLAG00000006858) #15	TFF2 (ENSCLAG00000014359) #17	TFF3 (ENSCLAG00000013670) #18	ABCG1 (ENSCLAG00000013116) #19	UMODL1 (ENSCLAG00000009892) #20	ZBTB21 (ENSCLAG00000006530) #22	C2CD2 (ENSCLAG00000007896) #23	PRDM15 (ENSCLAG00000005430) #24	RIPK4 (ENSCLAG00000007447) #25	PCP4 (ENSCLAG00000012532)	DSCAM (ENSCLAG00000016317)	BACE2 (ENSCLAG00000006208) #31	ENSCLAG00000006920 #27	FAM3B (ENSCLAG00000005832) #30	TMPRSS2 (ENSCLAG00000006480) #26	LRRC3 (ENSCLAG00000006488)	TRPM2 (ENSCLAG00000007001)	CFAP410 (ENSCLAG00000005977)	PFKL (ENSCLAG00000006907)	AIRE (ENSCLAG00000004699)	DNMT3L (ENSCLAG00000008128)
Degu	MODERN SPECIES	86	CBS (ENSODEG00000012996)	PKNOX1 (ENSODEG00000012122) #7	ENSODEG00000014099 #8	ENSODEG00000012402	WDR4 (ENSODEG00000012553) #9	PDE9A (ENSODEG00000013816) #10	SLC37A1 (ENSODEG00000013553) #12	RSPH1 (ENSODEG00000012910) #13	UBASH3A (ENSODEG00000013424) #14	TMPRSS3 (ENSODEG00000013031) #15	ENSODEG00000014901 #16	TFF2 (ENSODEG00000012650) #17	TFF3 (ENSODEG00000013636) #18	ABCG1 (ENSODEG00000012323) #19	UMODL1 (ENSODEG00000012627) #20	ZBTB21 (ENSODEG00000014325) #22	C2CD2 (ENSODEG00000014616) #23	PRDM15 (ENSODEG00000013112) #24	RIPK4 (ENSODEG00000013779) #25	TMPRSS2 (ENSODEG00000013358) #26	ENSODEG00000013917 #27	ENSODEG00000014232 #30	BACE2 (ENSODEG00000013570) #31	DSCAM (ENSODEG00000012858)	LRRC3 (ENSODEG00000020091)	TRPM2 (ENSODEG00000013043)	CFAP410 (ENSODEG00000012840)	PFKL (ENSODEG00000014418)	ENSODEG00000013954	PWP2 (ENSODEG00000013073)	ENSODEG00000013648
Guinea pig	MODERN SPECIES	90	Cryaa (ENSCPOG00000004350)	U2AF1 (ENSCPOG00000004893)	CBS (ENSCPOG00000007817)	PKNOX1 (ENSCPOG00000039252) #7	ENSCPOG00000035722 #8	WDR4 (ENSCPOG00000037037) #9	PDE9A (ENSCPOG00000014197) #10	SLC37A1 (ENSCPOG00000011616) #12	RSPH1 (ENSCPOG00000002266) #13	UBASH3A (ENSCPOG00000013429) #14	TMPRSS3 (ENSCPOG00000012057) #15	TFF2 (ENSCPOG00000012065) #17	ENSCPOG00000006226 #18	ABCG1 (ENSCPOG00000015194) #19	UMODL1 (ENSCPOG00000023566) #20	ZBTB21 (ENSCPOG00000019792) #22	C2CD2 (ENSCPOG00000002808) #23	PRDM15 (ENSCPOG00000023446) #24	RIPK4 (ENSCPOG00000022900) #25	ENSCPOG00000007052 #26	ENSCPOG00000021489 #26	ENSCPOG00000013108 #30	ENSCPOG00000025373 #27	BACE2 (ENSCPOG00000007403) #31	DSCAM (ENSCPOG00000005367)	PCP4 (ENSCPOG00000039173)	LRRC3 (ENSCPOG00000030436)	TRPM2 (ENSCPOG00000023512)	CFAP410 (ENSCPOG00000009611)	PFKL (ENSCPOG00000019438)	AIRE (ENSCPOG00000019868)
Naked mole-rat female	MODERN SPECIES	11	NDUFV3 (ENSHGLG00000041826) #8	ENSHGLG00000035018	WDR4 (ENSHGLG00000017900) #9	PDE9A (ENSHGLG00000019554) #10	SLC37A1 (ENSHGLG00000008351) #12	RSPH1 (ENSHGLG00000005500) #13	UBASH3A (ENSHGLG00000036614) #14	TMPRSS3 (ENSHGLG00000007911) #15	ENSHGLG00000050421	TFF2 (ENSHGLG00000006500) #17	TFF3 (ENSHGLG00000007574) #18	ENSHGLG00000040957 #19	ENSHGLG00000035485 #19	ENSHGLG00000009228	ENSHGLG00000015409 #20	ZBTB21 (ENSHGLG00000017068) #22	C2CD2 (ENSHGLG00000016958) #23	PRDM15 (ENSHGLG00000016972) #24	RIPK4 (ENSHGLG00000011078) #25	ENSHGLG00000018181 #26	ENSHGLG00000017431 #27	ENSHGLG00000005110 #30	ENSHGLG00000041834 #27	ENSHGLG00000006993 #31	ENSHGLG00000008616	ENSHGLG00000005193	PCP4 (ENSHGLG00000043480)	ENSHGLG00000042683	TRPM2 (ENSHGLG00000018785)	ENSHGLG00000016027	PFKL (ENSHGLG00000017234)
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00960000188749	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00960000188749	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686 #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Squirrel	MODERN SPECIES	100	SIK1 (ENSSTOG00000003810)	CRYAA (ENSSTOG00000019571)	U2AF1 (ENSSTOG00000012766)	CBS (ENSSTOG00000024905)	PKNOX1 (ENSSTOG00000000447) #7	NDUFV3 (ENSSTOG00000000445) #8	WDR4 (ENSSTOG00000000442) #9	PDE9A (ENSSTOG00000001452) #10	SLC37A1 (ENSSTOG00000025445) #12	RSPH1 (ENSSTOG00000002331) #13	ENSSTOG00000000600 #14	TMPRSS3 (ENSSTOG00000024702) #15	TFF3 (ENSSTOG00000000593) #18	ABCG1 (ENSSTOG00000027580) #19	UMODL1 (ENSSTOG00000027158) #20	ZBTB21 (ENSSTOG00000010003) #22	C2CD2 (ENSSTOG00000015690) #23	PRDM15 (ENSSTOG00000000262) #24	RIPK4 (ENSSTOG00000020499) #25	TMPRSS2 (ENSSTOG00000012868) #26	FAM3B (ENSSTOG00000006382) #30	MX1 (ENSSTOG00000012846) #27	BACE2 (ENSSTOG00000011669) #31	DSCAM (ENSSTOG00000004849)	PCP4 (ENSSTOG00000033674)	ENSSTOG00000002986	B3GALT5 (ENSSTOG00000012749)	SH3BGR (ENSSTOG00000020100)	GET1 (ENSSTOG00000012736)	HMGN1 (ENSSTOG00000030815)	BRWD1 (ENSSTOG00000027149)
Arctic ground squirrel	MODERN SPECIES	676													ENSUPAG00010022950	ABCG1 (ENSUPAG00010022948) #19	UMODL1 (ENSUPAG00010022946) #20	ZBTB21 (ENSUPAG00010022945) #22	C2CD2 (ENSUPAG00010022943) #23	PRDM15 (ENSUPAG00010022940) #24	RIPK4 (ENSUPAG00010022938) #25	TMPRSS2 (ENSUPAG00010022935) #26
Alpin marmot	MODERN SPECIES	4	U2AF1 (ENSMMMG00000011117)	CBS (ENSMMMG00000011087)	PKNOX1 (ENSMMMG00000011067) #7	ENSMMMG00000011055 #8	WDR4 (ENSMMMG00000011036) #9	PDE9A (ENSMMMG00000010894) #10	SLC37A1 (ENSMMMG00000010809) #12	RSPH1 (ENSMMMG00000010607) #13	UBASH3A (ENSMMMG00000010550) #14	TMPRSS3 (ENSMMMG00000010515) #15	ENSMMMG00000010506	ENSMMMG00000010491	TFF3 (ENSMMMG00000010483) #18	ABCG1 (ENSMMMG00000010456) #19	UMODL1 (ENSMMMG00000010282) #20	ENSMMMG00000010266 #22	C2CD2 (ENSMMMG00000010233) #23	PRDM15 (ENSMMMG00000010191) #24	RIPK4 (ENSMMMG00000010156) #25	TMPRSS2 (ENSMMMG00000010132) #26	MX1 (ENSMMMG00000004765) #27	FAM3B (ENSMMMG00000004645) #30	BACE2 (ENSMMMG00000004641) #31	DSCAM (ENSMMMG00000004573)	PCP4 (ENSMMMG00000004533)	ENSMMMG00000004498	B3GALT5 (ENSMMMG00000004484)	ENSMMMG00000004462	SH3BGR (ENSMMMG00000004305)	LCA5L (ENSMMMG00000004259)	GET1 (ENSMMMG00000004202)
Eurasian red squirrel	MODERN SPECIES	1	PKNOX1 (ENSSVLG00005025120) #7	ENSSVLG00005025141 #8	WDR4 (ENSSVLG00005025158) #9	ENSSVLG00005011248	PDE9A (ENSSVLG00005011481) #10	SLC37A1 (ENSSVLG00005012892) #12	RSPH1 (ENSSVLG00005013160) #13	UBASH3A (ENSSVLG00005013444) #14	TMPRSS3 (ENSSVLG00005013778) #15	ENSSVLG00005014123 #16	TFF2 (ENSSVLG00005014174) #17	ENSSVLG00005014242 #18	ENSSVLG00005014286 #18	ABCG1 (ENSSVLG00005014331) #19	UMODL1 (ENSSVLG00005014644) #20	ZBTB21 (ENSSVLG00005015081) #22	C2CD2 (ENSSVLG00005015130) #23	PRDM15 (ENSSVLG00005015213) #24	RIPK4 (ENSSVLG00005015741) #25	TMPRSS2 (ENSSVLG00005015845) #26	ENSSVLG00005015978 #27	FAM3B (ENSSVLG00005016099) #30	ENSSVLG00005016342 #27	BACE2 (ENSSVLG00005017213) #31	DSCAM (ENSSVLG00005017352)	PCP4 (ENSSVLG00005018045)	ENSSVLG00005018094	B3GALT5 (ENSSVLG00005018186)	SH3BGR (ENSSVLG00005018209)	LCA5L (ENSSVLG00005018302)	GET1 (ENSSVLG00005018408)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Kangaroo rat	MODERN SPECIES	422	Cryaa (ENSDORG00000008969)	U2af1 (ENSDORG00000000211)	Cbs (ENSDORG00000000208)	Pknox1 (ENSDORG00000000207) #7	Wdr4 (ENSDORG00000002150) #9	Pde9a (ENSDORG00000002149) #10	Slc37a1 (ENSDORG00000010442) #12	Rsph1 (ENSDORG00000005155) #13	ENSDORG00000024014 #14	Tmprss3 (ENSDORG00000009229) #15	Tff1 (ENSDORG00000009227) #16	Tff2 (ENSDORG00000003845) #17	Tff3 (ENSDORG00000029966) #18	Abcg1 (ENSDORG00000025745) #19	Umodl1 (ENSDORG00000001772) #20	Zbtb21 (ENSDORG00000000981) #22	ENSDORG00000028102	C2cd2 (ENSDORG00000000978) #23	Prdm15 (ENSDORG00000009748) #24	Ripk4 (ENSDORG00000008414) #25	Tmprss2 (ENSDORG00000003340) #26	ENSDORG00000003337 #27	Fam3b (ENSDORG00000011095) #30	ENSDORG00000027605 #27	Bace2 (ENSDORG00000010948) #31	ENSDORG00000030205	Dscam (ENSDORG00000002348)	ENSDORG00000025922	ENSDORG00000007355	Igsf5 (ENSDORG00000005042)	B3galt5 (ENSDORG00000027270)
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Muroidea	ANCESTRAL SPECIES	11	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686 #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Muroidea_A	ANCESTRAL SPECIES	17																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Cricetidae	ANCESTRAL SPECIES	16																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Cricetinae	ANCESTRAL SPECIES	10															ENSGT00940000153805.q.b.a.a.a.a.a.a.a.a.c.a.a	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	382															ENSCGRG00001016488	Zbtb21 (ENSCGRG00001012061) #22	C2cd2 (ENSCGRG00001018582) #23	Prdm15 (ENSCGRG00001012883) #24	Ripk4 (ENSCGRG00001021625) #25	ENSCGRG00001011892	Tmprss2 (ENSCGRG00001008718) #26	Mx2 (ENSCGRG00001004304) #27	Fam3b (ENSCGRG00001021679) #30	Mx1 (ENSCGRG00001009938) #27	Bace2 (ENSCGRG00001006826) #31	Dscam (ENSCGRG00001020907)	ENSCGRG00001011223	Igsf5 (ENSCGRG00001017358)	B3galt5 (ENSCGRG00001003465)	ENSCGRG00001018634	Lca5l (ENSCGRG00001001508)
Golden Hamster	MODERN SPECIES	659												ENSMAUG00000011099	ENSMAUG00000013074	ENSMAUG00000014178	ENSMAUG00000014891	ENSMAUG00000011188 #22	C2cd2 (ENSMAUG00000013544) #23	Prdm15 (ENSMAUG00000013730) #24	Ripk4 (ENSMAUG00000017222) #25	Tmprss2 (ENSMAUG00000018948) #26	Mx2 (ENSMAUG00000016913) #27	Fam3b (ENSMAUG00000018355) #30	Mx1 (ENSMAUG00000000088) #27	Bace2 (ENSMAUG00000018970) #31	Dscam (ENSMAUG00000002565)	ENSMAUG00000001783	Igsf5 (ENSMAUG00000018757)	ENSMAUG00000001722	Lca5l (ENSMAUG00000001467)	ENSMAUG00000008620	Hmgn1 (ENSMAUG00000009433)
Cricetidae_B	ANCESTRAL SPECIES	13																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Prairie vole	MODERN SPECIES	155																ENSMOCG00000000330 #22	C2cd2 (ENSMOCG00000007215) #23	Prdm15 (ENSMOCG00000019515) #24	Ripk4 (ENSMOCG00000004535) #25	Tmprss2 (ENSMOCG00000009120) #26	Mx2 (ENSMOCG00000015763) #27	Fam3b (ENSMOCG00000001358) #30	Mx1 (ENSMOCG00000015113) #27	Bace2 (ENSMOCG00000018255) #31	Dscam (ENSMOCG00000000769)	ENSMOCG00000016357	Itgb2l (ENSMOCG00000000046)	Igsf5 (ENSMOCG00000013940)
Northern American deer mouse	MODERN SPECIES	3	Fam243 (ENSPEMG00000001798)	ENSPEMG00000027965	Kcne1 (ENSPEMG00000028921)	Rcan1 (ENSPEMG00000021805)	Clic6 (ENSPEMG00000023402)	Runx1 (ENSPEMG00000006411)	ENSPEMG00000030351 #27	Setd4 (ENSPEMG00000008049)	ENSPEMG00000012580	ENSPEMG00000029598	ENSPEMG00000018395	Cbr3 (ENSPEMG00000018622)	Dop1b (ENSPEMG00000007073)	Morc3 (ENSPEMG00000011221)	ENSPEMG00000030407	Zbtb21 (ENSPEMG00000025526) #22	C2cd2 (ENSPEMG00000014730) #23	Prdm15 (ENSPEMG00000011962) #24	Ripk4 (ENSPEMG00000016616) #25	Tmprss2 (ENSPEMG00000007177) #26	ENSPEMG00000027256 #27	ENSPEMG00000024660 #27	ENSPEMG00000027181 #27	ENSPEMG00000014739 #27	Fam3b (ENSPEMG00000017357) #30	ENSPEMG00000015989 #27	Bace2 (ENSPEMG00000015582) #31	Dscam (ENSPEMG00000013979)	ENSPEMG00000029164	Itgb2l (ENSPEMG00000009654)	Igsf5 (ENSPEMG00000007617)
Murinae	ANCESTRAL SPECIES	13																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Mus	ANCESTRAL SPECIES	13																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Mus_A	ANCESTRAL SPECIES	18																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Mus_B	ANCESTRAL SPECIES	18																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Mus_C	ANCESTRAL SPECIES	12																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.i #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000155686.j #27	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
spretus	MODERN SPECIES	7																Zbtb21 (MGP_SPRETEiJ_G0021921) #22	C2cd2 (MGP_SPRETEiJ_G0021920) #23	Prdm15 (MGP_SPRETEiJ_G0021919) #24	Ripk4 (MGP_SPRETEiJ_G0021918) #25	Tmprss2 (MGP_SPRETEiJ_G0021917) #26	Fam3b (MGP_SPRETEiJ_G0021916) #30	MGP_SPRETEiJ_G0021915 #27	Bace2 (MGP_SPRETEiJ_G0021914) #31	Dscam (MGP_SPRETEiJ_G0021913)	MGP_SPRETEiJ_G0021912	Itgb2l (MGP_SPRETEiJ_G0021911)	Igsf5 (MGP_SPRETEiJ_G0021910)	B3galt5 (MGP_SPRETEiJ_G0021909)	MGP_SPRETEiJ_G0021908	Lca5l (MGP_SPRETEiJ_G0021907)	MGP_SPRETEiJ_G0021906
Steppe mouse	MODERN SPECIES	2600															ENSMSIG00000020680	ENSMSIG00000020580 #22	Prdm15 (ENSMSIG00000020473) #24	Ripk4 (ENSMSIG00000020456) #25	ENSMSIG00000020427 #26	ENSMSIG00000020383 #27	Fam3b (ENSMSIG00000020247) #30	ENSMSIG00000020084 #27	Bace2 (ENSMSIG00000020064) #31
Mouse	MODERN SPECIES	7														A630089N07Rik (ENSMUSG00000116673)	B230307C23Rik (ENSMUSG00000080717)	Zbtb21 (ENSMUSG00000046962) #22	C2cd2 (ENSMUSG00000045975) #23	Prdm15 (ENSMUSG00000014039) #24	Ripk4 (ENSMUSG00000005251) #25	Tmprss2 (ENSMUSG00000000385) #26	Mx2 (ENSMUSG00000023341) #27	Fam3b (ENSMUSG00000022938) #30	Mx1 (ENSMUSG00000000386) #27	Bace2 (ENSMUSG00000040605) #31	Dscam (ENSMUSG00000050272)	Pcp4 (ENSMUSG00000090223)	Itgb2l (ENSMUSG00000000157)	Gm49948 (ENSMUSG00000117081)	Igsf5 (ENSMUSG00000000159)	B3galt5 (ENSMUSG00000074892)	Sh3bgr (ENSMUSG00000040666)
Ryukyu mouse	MODERN SPECIES	7																Zbtb21 (MGP_CAROLIEiJ_G0021014) #22	C2cd2 (MGP_CAROLIEiJ_G0021013) #23	Prdm15 (MGP_CAROLIEiJ_G0021012) #24	Ripk4 (MGP_CAROLIEiJ_G0021011) #25	MGP_CAROLIEiJ_G0008949 #27	Fam3b (MGP_CAROLIEiJ_G0021010) #30	MGP_CAROLIEiJ_G0021009 #27	Bace2 (MGP_CAROLIEiJ_G0021008) #31	Dscam (MGP_CAROLIEiJ_G0021007)	MGP_CAROLIEiJ_G0021006	Itgb2l (MGP_CAROLIEiJ_G0021005)	Igsf5 (MGP_CAROLIEiJ_G0021004)	B3galt5 (MGP_CAROLIEiJ_G0021003)	MGP_CAROLIEiJ_G0021002	Lca5l (MGP_CAROLIEiJ_G0021001)	MGP_CAROLIEiJ_G0021000
Shrew mouse	MODERN SPECIES	3																Zbtb21 (MGP_PahariEiJ_G0016720) #22	C2cd2 (MGP_PahariEiJ_G0016719) #23	Prdm15 (MGP_PahariEiJ_G0016718) #24	Ripk4 (MGP_PahariEiJ_G0016717) #25	Tmprss2 (MGP_PahariEiJ_G0016716) #26	MGP_PahariEiJ_G0008412 #27	Fam3b (MGP_PahariEiJ_G0016715) #30	MGP_PahariEiJ_G0016714 #27	Bace2 (MGP_PahariEiJ_G0016713) #31	Dscam (MGP_PahariEiJ_G0016712)	MGP_PahariEiJ_G0016711	Itgb2l (MGP_PahariEiJ_G0016710)	Igsf5 (MGP_PahariEiJ_G0016709)	B3galt5 (MGP_PahariEiJ_G0016708)	MGP_PahariEiJ_G0016707	Lca5l (MGP_PahariEiJ_G0016706)
Rat	MODERN SPECIES	2	Or5h26 (ENSRNOG00000070145)	Or5ac19 (ENSRNOG00000063214)	Or5ac21 (ENSRNOG00000065413)	Or5ac22 (ENSRNOG00000065628)	Or5ac23b (ENSRNOG00000068612)	Or5ac23 (ENSRNOG00000067715)	Or5ac24 (ENSRNOG00000064234)	Or5ac25 (ENSRNOG00000066783)	Gabrr3 (ENSRNOG00000001679)	Riox2 (ENSRNOG00000001680)	Crybg3 (ENSRNOG00000045728)	Arl6 (ENSRNOG00000001689)	Epha6 (ENSRNOG00000029184)	RGD1565472 (ENSRNOG00000046991)	Nsun3 (ENSRNOG00000070121)	Zbtb21 (ENSRNOG00000001623) #22	C2cd2 (ENSRNOG00000001621) #23	Prdm15 (ENSRNOG00000001620) #24	Ripk4 (ENSRNOG00000001618) #25	Tmprss2 (ENSRNOG00000001976) #26	Mx2 (ENSRNOG00000001963) #27	Fam3b (ENSRNOG00000001962) #30	Mx1 (ENSRNOG00000001959) #27	Bace2 (ENSRNOG00000001953) #31	Dscam (ENSRNOG00000027992)	Pcp4 (ENSRNOG00000001628)	ENSRNOG00000063024	Igsf5 (ENSRNOG00000028216)	B3galt5 (ENSRNOG00000030983)	Sh3bgr (ENSRNOG00000028238)	Lca5l (ENSRNOG00000028248)
Upper Galilee mountains blind mole rat	MODERN SPECIES	557	U2af1 (ENSNGAG00000021641)	Cbs (ENSNGAG00000011354)	Pknox1 (ENSNGAG00000015912) #7	Ndufv3 (ENSNGAG00000011220) #8	Wdr4 (ENSNGAG00000017117) #9	Pde9a (ENSNGAG00000014370) #10	Slc37a1 (ENSNGAG00000022440) #12	Rsph1 (ENSNGAG00000005022) #13	Ubash3a (ENSNGAG00000019150) #14	Tmprss3 (ENSNGAG00000002127) #15	Tff1 (ENSNGAG00000000843) #16	Tff2 (ENSNGAG00000018297) #17	Tff3 (ENSNGAG00000023456) #18	Abcg1 (ENSNGAG00000023186) #19	Umodl1 (ENSNGAG00000014854) #20	Zbtb21 (ENSNGAG00000022785) #22	C2cd2 (ENSNGAG00000021112) #23	Prdm15 (ENSNGAG00000023708) #24	Ripk4 (ENSNGAG00000011212) #25	Tmprss2 (ENSNGAG00000006186) #26
Lesser Egyptian jerboa	MODERN SPECIES	54	Cbs (ENSJJAG00000019675)	Pknox1 (ENSJJAG00000003326) #7	ENSJJAG00000022210	ENSJJAG00000012928 #8	Wdr4 (ENSJJAG00000016232) #9	Pde9a (ENSJJAG00000022814) #10	Slc37a1 (ENSJJAG00000009176) #12	Rsph1 (ENSJJAG00000023687) #13	Ubash3a (ENSJJAG00000018947) #14	Tmprss3 (ENSJJAG00000017683) #15	Tff1 (ENSJJAG00000020776) #16	Tff2 (ENSJJAG00000022987) #17	Tff3 (ENSJJAG00000014849) #18	Abcg1 (ENSJJAG00000011288) #19	Umodl1 (ENSJJAG00000012073) #20	Zbtb21 (ENSJJAG00000002063) #22	C2cd2 (ENSJJAG00000016581) #23	Prdm15 (ENSJJAG00000016457) #24	Ripk4 (ENSJJAG00000023752) #25	Tmprss2 (ENSJJAG00000021090) #26	ENSJJAG00000023808 #27	ENSJJAG00000023642 #30	ENSJJAG00000012773	Bace2 (ENSJJAG00000006557) #31	Dscam (ENSJJAG00000010430)	ENSJJAG00000013366	Igsf5 (ENSJJAG00000000540)	ENSJJAG00000018659	Lca5l (ENSJJAG00000017192)	ENSJJAG00000014499	ENSJJAG00000013400
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Carnivora	ANCESTRAL SPECIES	10	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b	ENSGT00940000163845	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238
Caniformia	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.d #24	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b	ENSGT00940000163845	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267
Caniformia_b	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.d #24	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000163845	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847
Ursidae	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841.d #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.d #24	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000163845.i	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847
Ursus	ANCESTRAL SPECIES	94	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841.d #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.d #24	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000163845.i	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30
Polar bear	MODERN SPECIES	394	U2AF1 (ENSUMAG00000025525)	CBS (ENSUMAG00000025527)	PKNOX1 (ENSUMAG00000025537) #7	NDUFV3 (ENSUMAG00000025538) #8	WDR4 (ENSUMAG00000025539) #9	PDE9A (ENSUMAG00000025540) #10	SLC37A1 (ENSUMAG00000025541) #12	RSPH1 (ENSUMAG00000025542) #13	UBASH3A (ENSUMAG00000025543) #14	TMPRSS3 (ENSUMAG00000025544) #15	TFF1 (ENSUMAG00000025545) #16	TFF2 (ENSUMAG00000025546) #17	TFF3 (ENSUMAG00000025547) #18	ABCG1 (ENSUMAG00000025548) #19	UMODL1 (ENSUMAG00000025621) #20	ZBTB21 (ENSUMAG00000025623) #22	C2CD2 (ENSUMAG00000025626) #23	ENSUMAG00000025627 #24	ENSUMAG00000025628 #24	RIPK4 (ENSUMAG00000025629) #25	ENSUMAG00000025630	TMPRSS2 (ENSUMAG00000025631) #26	MX1 (ENSUMAG00000025632) #27	MX2 (ENSUMAG00000025633) #29	ENSUMAG00000025634 #30
American black bear	MODERN SPECIES	4009																ZBTB21 (ENSUAMG00000020041) #22	C2CD2 (ENSUAMG00000019999) #23	ENSUAMG00000019986 #24
Giant Panda	MODERN SPECIES		ENSAMEG00000001765	PKNOX1 (ENSAMEG00000001778) #7	NDUFV3 (ENSAMEG00000001819) #8	WDR4 (ENSAMEG00000001823) #9	PDE9A (ENSAMEG00000001848) #10	SLC37A1 (ENSAMEG00000001892) #12	ENSAMEG00000001940 #13	UBASH3A (ENSAMEG00000001955) #14	TMPRSS3 (ENSAMEG00000001989) #15	ENSAMEG00000002023 #16	ENSAMEG00000002024 #17	ENSAMEG00000025924 #17	TFF3 (ENSAMEG00000025151) #18	ABCG1 (ENSAMEG00000002038) #19	UMODL1 (ENSAMEG00000002089) #20	ZBTB21 (ENSAMEG00000028624) #22	C2CD2 (ENSAMEG00000002123) #23	PRDM15 (ENSAMEG00000002162) #24	RIPK4 (ENSAMEG00000002205) #25	ENSAMEG00000031524	ENSAMEG00000024617	TMPRSS2 (ENSAMEG00000010563) #26	MX1 (ENSAMEG00000010494) #27	FAM3B (ENSAMEG00000005115) #30	BACE2 (ENSAMEG00000005103) #31	DSCAM (ENSAMEG00000005759)	ENSAMEG00000006410	B3GALT5 (ENSAMEG00000019434)	SH3BGR (ENSAMEG00000028047)	LCA5L (ENSAMEG00000014108)	GET1 (ENSAMEG00000014104)
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Ferret	MODERN SPECIES	248	CBS (ENSMPUG00000009689)	PKNOX1 (ENSMPUG00000009673) #7	ENSMPUG00000009667 #8	WDR4 (ENSMPUG00000009605) #9	PDE9A (ENSMPUG00000009433) #10	SLC37A1 (ENSMPUG00000009419) #12	RSPH1 (ENSMPUG00000009410) #13	UBASH3A (ENSMPUG00000009313) #14	TMPRSS3 (ENSMPUG00000009212) #15	ENSMPUG00000009203 #16	TFF2 (ENSMPUG00000009192) #17	TFF3 (ENSMPUG00000009174) #18	ABCG1 (ENSMPUG00000009157) #19	ENSMPUG00000009133	UMODL1 (ENSMPUG00000009050) #20	ZBTB21 (ENSMPUG00000009040) #22	C2CD2 (ENSMPUG00000008960) #23	PRDM15 (ENSMPUG00000008938) #24	RIPK4 (ENSMPUG00000008928) #25	ENSMPUG00000008922	TMPRSS2 (ENSMPUG00000008804) #26	MX1 (ENSMPUG00000008778) #27	MX2 (ENSMPUG00000008716) #29	FAM3B (ENSMPUG00000008701) #30	BACE2 (ENSMPUG00000008693) #31	ENSMPUG00000008687	ENSMPUG00000008669	PCP4 (ENSMPUG00000008663)	ENSMPUG00000008652	B3GALT5 (ENSMPUG00000008621)	SH3BGR (ENSMPUG00000008609)
Canidae	ANCESTRAL SPECIES	39	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.d #24	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000163441.f.a.a.b.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.d #24	ENSGT00940000157890.c #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT01100000263929	ENSGT00940000155183.a.a	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238
Dog	MODERN SPECIES	24	CRYAA (ENSCAFG00845017570)	U2AF1 (ENSCAFG00845017455)	CBS (ENSCAFG00845017169)	ENSCAFG00845017044 #7	WDR4 (ENSCAFG00845016943) #9	ENSCAFG00845016845 #10	SLC37A1 (ENSCAFG00845016674) #12	RSPH1 (ENSCAFG00845016424) #13	UBASH3A (ENSCAFG00845030552) #14	TMPRSS3 (ENSCAFG00845030504) #15	TFF1 (ENSCAFG00845030496) #16	TFF2 (ENSCAFG00845030490) #17	TFF3 (ENSCAFG00845030487) #18	ABCG1 (ENSCAFG00845030427) #19	UMODL1 (ENSCAFG00845030370) #20	ZBTB21 (ENSCAFG00845030348) #22	C2CD2 (ENSCAFG00845030326) #23	PRDM15 (ENSCAFG00845030258) #24	RIPK4 (ENSCAFG00845030222) #25	ENSCAFG00845030213	ENSCAFG00845030203	ENSCAFG00845030190	TMPRSS2 (ENSCAFG00845030150) #26	MX1 (ENSCAFG00845030104) #29	FAM3B (ENSCAFG00845030073) #30	BACE2 (ENSCAFG00845030032) #31	DSCAM (ENSCAFG00845029877)	PCP4 (ENSCAFG00845029822)	IGSF5 (ENSCAFG00845029797)	B3GALT5 (ENSCAFG00845029783)	SH3BGR (ENSCAFG00845029733)
Dingo	MODERN SPECIES	63	ENSCAFG00020018802	ENSCAFG00020018761	PKNOX1 (ENSCAFG00020018749) #7	NDUFV3 (ENSCAFG00020018747) #8	WDR4 (ENSCAFG00020018728) #9	PDE9A (ENSCAFG00020018526) #10	SLC37A1 (ENSCAFG00020018498) #12	RSPH1 (ENSCAFG00020018487) #13	UBASH3A (ENSCAFG00020018464) #14	TMPRSS3 (ENSCAFG00020018424) #15	TFF1 (ENSCAFG00020018416) #16	ENSCAFG00020018415 #17	TFF3 (ENSCAFG00020018411) #18	ABCG1 (ENSCAFG00020016625) #19	UMODL1 (ENSCAFG00020016599) #20	ENSCAFG00020016594 #22	C2CD2 (ENSCAFG00020016591) #23	ENSCAFG00020016578 #24	ENSCAFG00020016573 #24	RIPK4 (ENSCAFG00020016569) #25	ENSCAFG00020016567	ENSCAFG00020016563	ENSCAFG00020016554	TMPRSS2 (ENSCAFG00020016552) #26	MX1 (ENSCAFG00020016550) #27	MX2 (ENSCAFG00020016534) #29	FAM3B (ENSCAFG00020016531) #30
Red fox	MODERN SPECIES	181	U2AF1 (ENSVVUG00000017149)	CBS (ENSVVUG00000017132)	PKNOX1 (ENSVVUG00000017115) #7	NDUFV3 (ENSVVUG00000017092) #8	WDR4 (ENSVVUG00000017084) #9	PDE9A (ENSVVUG00000016818) #10	SLC37A1 (ENSVVUG00000016766) #12	RSPH1 (ENSVVUG00000016755) #13	UBASH3A (ENSVVUG00000016693) #14	TMPRSS3 (ENSVVUG00000016667) #15	TFF1 (ENSVVUG00000016656) #16	TFF2 (ENSVVUG00000016652) #17	TFF3 (ENSVVUG00000016649) #18	ABCG1 (ENSVVUG00000016638) #19	UMODL1 (ENSVVUG00000016621) #20	ZBTB21 (ENSVVUG00000016612) #22	C2CD2 (ENSVVUG00000016600) #23	PRDM15 (ENSVVUG00000016527) #24	RIPK4 (ENSVVUG00000016514) #25	ENSVVUG00000016507	ENSVVUG00000016503	ENSVVUG00000016502	TMPRSS2 (ENSVVUG00000016490) #26	ENSVVUG00000016487 #27	ENSVVUG00000016483 #29	ENSVVUG00000016470 #27	FAM3B (ENSVVUG00000016454) #30	BACE2 (ENSVVUG00000016424) #31	DSCAM (ENSVVUG00000016345)	PCP4 (ENSVVUG00000016329)	IGSF5 (ENSVVUG00000016321)
Felidae	ANCESTRAL SPECIES	9	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.b.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847
Panthera	ANCESTRAL SPECIES	17	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A.bb	ENSGT00950000183107.a.b.a
Panthera_a	ANCESTRAL SPECIES	63	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25
leopard	MODERN SPECIES	148	U2AF1 (ENSPPRG00000009721)	CBS (ENSPPRG00000009520)	PKNOX1 (ENSPPRG00000008876) #7	ENSPPRG00000008831 #8	WDR4 (ENSPPRG00000008824) #9	PDE9A (ENSPPRG00000008728) #10	SLC37A1 (ENSPPRG00000008368) #12	RSPH1 (ENSPPRG00000008318) #13	UBASH3A (ENSPPRG00000008175) #14	TMPRSS3 (ENSPPRG00000008007) #15	TFF1 (ENSPPRG00000007925) #16	TFF2 (ENSPPRG00000007919) #17	TFF3 (ENSPPRG00000007914) #18	ABCG1 (ENSPPRG00000007893) #19	UMODL1 (ENSPPRG00000007753) #20	ZBTB21 (ENSPPRG00000007645) #22	C2CD2 (ENSPPRG00000007622) #23	PRDM15 (ENSPPRG00000007591) #24	RIPK4 (ENSPPRG00000007482) #25
lion	MODERN SPECIES	9	U2AF1 (ENSPLOG00000016633)	CBS (ENSPLOG00000016524)	PKNOX1 (ENSPLOG00000016427) #7	ENSPLOG00000016396 #8	WDR4 (ENSPLOG00000016290) #9	PDE9A (ENSPLOG00000015820) #10	SLC37A1 (ENSPLOG00000015713) #12	RSPH1 (ENSPLOG00000015521) #13	UBASH3A (ENSPLOG00000015421) #14	TMPRSS3 (ENSPLOG00000014832) #15	ENSPLOG00000014767 #16	TFF2 (ENSPLOG00000014654) #17	ENSPLOG00000014592 #18	ABCG1 (ENSPLOG00000014424) #19	UMODL1 (ENSPLOG00000014146) #20	ZBTB21 (ENSPLOG00000014100) #22	C2CD2 (ENSPLOG00000014058) #23	PRDM15 (ENSPLOG00000013728) #24	RIPK4 (ENSPLOG00000013487) #25	ENSPLOG00000013454	ENSPLOG00000013430	ENSPLOG00000013356	TMPRSS2 (ENSPLOG00000013265) #26	MX1 (ENSPLOG00000012833) #27	FAM3B (ENSPLOG00000012689) #30	BACE2 (ENSPLOG00000012363) #31	DSCAM (ENSPLOG00000011858)	PCP4 (ENSPLOG00000011697)	B3GALT5 (ENSPLOG00000011684)	SH3BGR (ENSPLOG00000011642)	LCA5L (ENSPLOG00000011547)
Cat	MODERN SPECIES	240	U2AF1 (ENSFCAG00000003970)	CBS (ENSFCAG00000003969)	PKNOX1 (ENSFCAG00000042914) #7	NDUFV3 (ENSFCAG00000046775) #8	WDR4 (ENSFCAG00000003966) #9	PDE9A (ENSFCAG00000003965) #10	SLC37A1 (ENSFCAG00000012708) #12	RSPH1 (ENSFCAG00000012707) #13	UBASH3A (ENSFCAG00000012706) #14	TMPRSS3 (ENSFCAG00000012705) #15	TFF1 (ENSFCAG00000012704) #16	TFF2 (ENSFCAG00000012703) #17	TFF3 (ENSFCAG00000029722) #18	ABCG1 (ENSFCAG00000012701) #19	UMODL1 (ENSFCAG00000012699) #20	ZBTB21 (ENSFCAG00000036093) #22	C2CD2 (ENSFCAG00000012696) #23	PRDM15 (ENSFCAG00000012695) #24	RIPK4 (ENSFCAG00000012694) #25	ENSFCAG00000039699	ENSFCAG00000044509	ENSFCAG00000053296	TMPRSS2 (ENSFCAG00000008071) #26	MX1 (ENSFCAG00000008068) #27	FAM3B (ENSFCAG00000001970) #30	BACE2 (ENSFCAG00000001969) #31	DSCAM (ENSFCAG00000008209)	PCP4 (ENSFCAG00000035623)	IGSF5 (ENSFCAG00000004674)	B3GALT5 (ENSFCAG00000004673)	SH3BGR (ENSFCAG00000004671)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847
Equus	ANCESTRAL SPECIES	42	ENSGT00950000183152.B.c.a	ENSGT00510000047027.h	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.b.a.a.a	ENSGT00940000163258.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847
Horse	MODERN SPECIES	18	ENSECAG00000022794	ENSECAG00000046444	PKNOX1 (ENSECAG00000010284) #7	NDUFV3 (ENSECAG00000003055) #8	WDR4 (ENSECAG00000019212) #9	PDE9A (ENSECAG00000017519) #10	SLC37A1 (ENSECAG00000015444) #12	RSPH1 (ENSECAG00000010466) #13	UBASH3A (ENSECAG00000032819) #14	TMPRSS3 (ENSECAG00000000233) #15	TFF1 (ENSECAG00000018260) #16	TFF2 (ENSECAG00000016409) #17	TFF3 (ENSECAG00000015204) #18	ABCG1 (ENSECAG00000019065) #19	UMODL1 (ENSECAG00000013946) #20	ZBTB21 (ENSECAG00000013046) #22	C2CD2 (ENSECAG00000006419) #23	PRDM15 (ENSECAG00000017225) #24	RIPK4 (ENSECAG00000008330) #25	ENSECAG00000015072	ENSECAG00000007982	ENSECAG00000053969	TMPRSS2 (ENSECAG00000022289) #26	MX1 (ENSECAG00000011776) #27	MX2 (ENSECAG00000049815) #29	FAM3B (ENSECAG00000043951) #30	BACE2 (ENSECAG00000005305) #31	DSCAM (ENSECAG00000012936)	PCP4 (ENSECAG00000012551)	IGSF5 (ENSECAG00000012049)	B3GALT5 (ENSECAG00000004805)
Donkey	MODERN SPECIES	9	PKNOX1 (ENSEASG00005003760) #7	ENSEASG00005038681	ENSEASG00005038023	NDUFV3 (ENSEASG00005003763) #8	WDR4 (ENSEASG00005003766) #9	PDE9A (ENSEASG00005003769) #10	SLC37A1 (ENSEASG00005003775) #12	RSPH1 (ENSEASG00005030089) #13	UBASH3A (ENSEASG00005003787) #14	TMPRSS3 (ENSEASG00005003829) #15	TFF1 (ENSEASG00005003840) #16	TFF2 (ENSEASG00005003842) #17	ENSEASG00005025530 #18	ABCG1 (ENSEASG00005003849) #19	UMODL1 (ENSEASG00005003854) #20	ZBTB21 (ENSEASG00005030372) #22	C2CD2 (ENSEASG00005003887) #23	PRDM15 (ENSEASG00005003891) #24	ENSEASG00005024756 #25	ENSEASG00005014723	ENSEASG00005032518	ENSEASG00005003908 #26	MX1 (ENSEASG00005003911) #27	MX2 (ENSEASG00005004002) #29	FAM3B (ENSEASG00005029773) #30	BACE2 (ENSEASG00005006036) #31	DSCAM (ENSEASG00005006046)	PCP4 (ENSEASG00005028031)	ENSEASG00005006052	B3GALT5 (ENSEASG00005032992)	SH3BGR (ENSEASG00005006056)
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000163845	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000163845	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Microbat	MODERN SPECIES	1574										ENSMLUG00000026737 #15	TFF1 (ENSMLUG00000000125) #16	TFF2 (ENSMLUG00000014637) #17	TFF3 (ENSMLUG00000000122) #18	ABCG1 (ENSMLUG00000000111) #19	ENSMLUG00000002429 #20	ZBTB21 (ENSMLUG00000001122) #22	ENSMLUG00000001106 #23
Greater horseshoe bat	MODERN SPECIES	11	U2AF1 (ENSRFEG00010000191)	CBS (ENSRFEG00010000170)	PKNOX1 (ENSRFEG00010000147) #7	NDUFV3 (ENSRFEG00010004952) #8	WDR4 (ENSRFEG00010004938) #9	PDE9A (ENSRFEG00010004823) #10	SLC37A1 (ENSRFEG00010004677) #12	RSPH1 (ENSRFEG00010004627) #13	UBASH3A (ENSRFEG00010004562) #14	TMPRSS3 (ENSRFEG00010004521) #15	TFF1 (ENSRFEG00010004500) #16	TFF2 (ENSRFEG00010004488) #17	TFF3 (ENSRFEG00010004472) #18	ABCG1 (ENSRFEG00010004426) #19	UMODL1 (ENSRFEG00010004384) #20	ZBTB21 (ENSRFEG00010004342) #22	C2CD2 (ENSRFEG00010004326) #23	PRDM15 (ENSRFEG00010004214) #24	RIPK4 (ENSRFEG00010004153) #25	ENSRFEG00010004128	TMPRSS2 (ENSRFEG00010004092) #26	MX2 (ENSRFEG00010004048) #29	BACE2 (ENSRFEG00010003983) #31	DSCAM (ENSRFEG00010003886)	PCP4 (ENSRFEG00010003849)	ENSRFEG00010003825	B3GALT5 (ENSRFEG00010003750)	SH3BGR (ENSRFEG00010003716)	ENSRFEG00010003692	ENSRFEG00010003681	GET1 (ENSRFEG00010003643)
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Suina	ANCESTRAL SPECIES	35	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000163441.f.a.b	ENSGT00940000163441.f.a.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Pig	MODERN SPECIES	4	U2AF1 (ENSSSCG00000033653)	CBS (ENSSSCG00000040779)	PKNOX1 (ENSSSCG00000037663) #7	ENSSSCG00000021991 #8	WDR4 (ENSSSCG00000023078) #9	PDE9A (ENSSSCG00000030016) #10	SLC37A1 (ENSSSCG00000012087) #12	RSPH1 (ENSSSCG00000040224) #13	UBASH3A (ENSSSCG00000029511) #14	TMPRSS3 (ENSSSCG00000022568) #15	TFF1 (ENSSSCG00000034731) #16	TFF2 (ENSSSCG00000024320) #17	TFF3 (ENSSSCG00000022857) #18	ABCG1 (ENSSSCG00000027745) #19	UMODL1 (ENSSSCG00000022290) #20	ZBTB21 (ENSSSCG00000054999) #22	C2CD2 (ENSSSCG00000025821) #23	PRDM15 (ENSSSCG00000012084) #24	RIPK4 (ENSSSCG00000012083) #25	ENSSSCG00000036487	ENSSSCG00000020673	TMPRSS2 (ENSSSCG00000024336) #26	MX1 (ENSSSCG00000012077) #27	MX2 (ENSSSCG00000012076) #29	FAM3B (ENSSSCG00000012075) #30	ENSSSCG00000012074 #31	DSCAM (ENSSSCG00000012072)	PCP4 (ENSSSCG00000037110)	ENSSSCG00000012071	ENSSSCG00000038056	ENSSSCG00000050754
Chacoan peccary	MODERN SPECIES	99	PKNOX1 (ENSCWAG00000017571) #7	ENSCWAG00000017560	ENSCWAG00000017536 #8	WDR4 (ENSCWAG00000017511) #9	ENSCWAG00000017489	PDE9A (ENSCWAG00000014566) #10	SLC37A1 (ENSCWAG00000014362) #12	RSPH1 (ENSCWAG00000014210) #13	UBASH3A (ENSCWAG00000013971) #14	TMPRSS3 (ENSCWAG00000013680) #15	TFF1 (ENSCWAG00000013623) #16	TFF2 (ENSCWAG00000013597) #17	TFF3 (ENSCWAG00000013544) #18	ABCG1 (ENSCWAG00000013204) #19	UMODL1 (ENSCWAG00000012980) #20	ZBTB21 (ENSCWAG00000012917) #22	C2CD2 (ENSCWAG00000012763) #23	PRDM15 (ENSCWAG00000012386) #24	RIPK4 (ENSCWAG00000012285) #25	ENSCWAG00000012265	ENSCWAG00000012213	TMPRSS2 (ENSCWAG00000012074) #26	MX1 (ENSCWAG00000011993) #27	MX2 (ENSCWAG00000011842) #29	FAM3B (ENSCWAG00000011663) #30	BACE2 (ENSCWAG00000011510) #31	DSCAM (ENSCWAG00000011010)	PCP4 (ENSCWAG00000010963)	ENSCWAG00000010918	B3GALT5 (ENSCWAG00000010904)	SH3BGR (ENSCWAG00000010866)
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Cetacea	ANCESTRAL SPECIES	10	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196.a #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196.a #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196.a #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196.a #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000159953.A	ENSGT00950000182802.A.ab.b.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196.a #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000159953.A	ENSGT01030000236716	ENSGT00950000182802.A.ab.b.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Narwhal	MODERN SPECIES	297	U2AF1 (ENSMMNG00015002628)	CBS (ENSMMNG00015002675)	PKNOX1 (ENSMMNG00015002718) #7	NDUFV3 (ENSMMNG00015002750) #8	WDR4 (ENSMMNG00015002775) #9	PDE9A (ENSMMNG00015002827) #10	SLC37A1 (ENSMMNG00015002910) #12	RSPH1 (ENSMMNG00015002990) #13	UBASH3A (ENSMMNG00015003040) #14	TMPRSS3 (ENSMMNG00015003078) #15	ENSMMNG00015003110 #16	TFF2 (ENSMMNG00015003126) #17	TFF3 (ENSMMNG00015003140) #18	ABCG1 (ENSMMNG00015003156) #19	UMODL1 (ENSMMNG00015003254) #20	ZBTB21 (ENSMMNG00015003466) #22	C2CD2 (ENSMMNG00015003489) #23	PRDM15 (ENSMMNG00015003594) #24	RIPK4 (ENSMMNG00015003627) #25	ENSMMNG00015003646	ENSMMNG00015003659	ENSMMNG00015003689	TMPRSS2 (ENSMMNG00015003713) #26	ENSMMNG00015003743 #27	ENSMMNG00015003775 #29	FAM3B (ENSMMNG00015003809) #30	BACE2 (ENSMMNG00015003863) #31	DSCAM (ENSMMNG00015003949)	PCP4 (ENSMMNG00015004028)	ENSMMNG00015004044	B3GALT5 (ENSMMNG00015004063)
Beluga whale	MODERN SPECIES	111	U2AF1 (ENSDLEG00000021062)	CBS (ENSDLEG00000021070)	PKNOX1 (ENSDLEG00000021076) #7	NDUFV3 (ENSDLEG00000021078) #8	WDR4 (ENSDLEG00000021081) #9	PDE9A (ENSDLEG00000021086) #10	SLC37A1 (ENSDLEG00000021092) #12	RSPH1 (ENSDLEG00000021097) #13	UBASH3A (ENSDLEG00000021103) #14	TMPRSS3 (ENSDLEG00000021135) #15	ENSDLEG00000021144 #16	TFF2 (ENSDLEG00000021145) #17	TFF3 (ENSDLEG00000021148) #18	ABCG1 (ENSDLEG00000021150) #19	UMODL1 (ENSDLEG00000021156) #20	ZBTB21 (ENSDLEG00000021171) #22	C2CD2 (ENSDLEG00000021174) #23	PRDM15 (ENSDLEG00000021181) #24	RIPK4 (ENSDLEG00000021191) #25	ENSDLEG00000021194	ENSDLEG00000021198	TMPRSS2 (ENSDLEG00000021202) #26	ENSDLEG00000021207 #27	ENSDLEG00000021211 #29	FAM3B (ENSDLEG00000021216) #30	BACE2 (ENSDLEG00000021225) #31	DSCAM (ENSDLEG00000021237)	PCP4 (ENSDLEG00000017075)	IGSF5 (ENSDLEG00000017082)	B3GALT5 (ENSDLEG00000017088)	SH3BGR (ENSDLEG00000017102)
Vaquita	MODERN SPECIES	15	CRYAA (ENSPSNG00000010191)	U2AF1 (ENSPSNG00000010054)	CBS (ENSPSNG00000009906)	PKNOX1 (ENSPSNG00000006002) #7	NDUFV3 (ENSPSNG00000005932) #8	WDR4 (ENSPSNG00000005893) #9	PDE9A (ENSPSNG00000005243) #10	SLC37A1 (ENSPSNG00000004936) #12	RSPH1 (ENSPSNG00000004899) #13	UBASH3A (ENSPSNG00000004836) #14	TMPRSS3 (ENSPSNG00000004757) #15	TFF1 (ENSPSNG00000004712) #16	TFF2 (ENSPSNG00000004686) #17	ENSPSNG00000004667 #19	UMODL1 (ENSPSNG00000004496) #20	ZBTB21 (ENSPSNG00000004418) #22	C2CD2 (ENSPSNG00000004376) #23	PRDM15 (ENSPSNG00000004163) #24	RIPK4 (ENSPSNG00000004086) #25	ENSPSNG00000004073	ENSPSNG00000004058	TMPRSS2 (ENSPSNG00000004031) #26	ENSPSNG00000004017 #27	FAM3B (ENSPSNG00000003986) #30	BACE2 (ENSPSNG00000003936) #31	DSCAM (ENSPSNG00000003835)	PCP4 (ENSPSNG00000003804)	ENSPSNG00000003781	B3GALT5 (ENSPSNG00000003756)	SH3BGR (ENSPSNG00000003727)	LCA5L (ENSPSNG00000003698)
Dolphin	MODERN SPECIES	720																ZBTB21 (ENSTTRG00000012644) #22	C2CD2 (ENSTTRG00000012643) #23	PRDM15 (ENSTTRG00000012632) #24
Sperm whale	MODERN SPECIES	1050																ZBTB21 (ENSPCTG00005010653) #22
Blue whale	MODERN SPECIES	15	CBS (ENSBMSG00010006633)	ENSBMSG00010006616	PKNOX1 (ENSBMSG00010006599) #7	ENSBMSG00010006574 #8	WDR4 (ENSBMSG00010006556) #9	PDE9A (ENSBMSG00010006135) #10	SLC37A1 (ENSBMSG00010005975) #12	RSPH1 (ENSBMSG00010005950) #13	UBASH3A (ENSBMSG00010005886) #14	TMPRSS3 (ENSBMSG00010005853) #15	TFF1 (ENSBMSG00010005833) #16	TFF2 (ENSBMSG00010005825) #17	TFF3 (ENSBMSG00010005816) #18	ABCG1 (ENSBMSG00010005783) #19	UMODL1 (ENSBMSG00010005688) #20	ZBTB21 (ENSBMSG00010005664) #22	C2CD2 (ENSBMSG00010005605) #23	PRDM15 (ENSBMSG00010005502) #24	RIPK4 (ENSBMSG00010005460) #25	ENSBMSG00010005452	ENSBMSG00010005449	TMPRSS2 (ENSBMSG00010005432) #26	MX1 (ENSBMSG00010005420) #27	ENSBMSG00010005388 #29	ENSBMSG00010005372 #29	FAM3B (ENSBMSG00010005351) #30	BACE2 (ENSBMSG00010005328) #31	DSCAM (ENSBMSG00010005253)	PCP4 (ENSBMSG00010005232)	ENSBMSG00010005220	B3GALT5 (ENSBMSG00010005204)
Pecora	ANCESTRAL SPECIES	8	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000009600	CBS (ENSCHYG00000009317)	PKNOX1 (ENSCHYG00000009096) #7	NDUFV3 (ENSCHYG00000008999) #8	WDR4 (ENSCHYG00000008871) #9	PDE9A (ENSCHYG00000008513) #10	SLC37A1 (ENSCHYG00000008438) #12	RSPH1 (ENSCHYG00000008397) #13	UBASH3A (ENSCHYG00000008362) #14	TMPRSS3 (ENSCHYG00000008214) #15	ENSCHYG00000008172 #16	TFF2 (ENSCHYG00000008137) #17	ENSCHYG00000008123 #18	ABCG1 (ENSCHYG00000008044) #19	UMODL1 (ENSCHYG00000007853) #20	ZBTB21 (ENSCHYG00000007803) #22	C2CD2 (ENSCHYG00000007736) #23	PRDM15 (ENSCHYG00000026615) #24	RIPK4 (ENSCHYG00000026601) #25	ENSCHYG00000026595	ENSCHYG00000026590	ENSCHYG00000026585	ENSCHYG00000026581	TMPRSS2 (ENSCHYG00000026573) #26	MX1 (ENSCHYG00000026565) #27	MX2 (ENSCHYG00000026550) #29	FAM3B (ENSCHYG00000026526) #30	ENSCHYG00000026515	BACE2 (ENSCHYG00000026498) #31	DSCAM (ENSCHYG00000026466)	PCP4 (ENSCHYG00000026460)
Percora_a	ANCESTRAL SPECIES	7	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b.a	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964
Siberian musk deer	MODERN SPECIES	1185	CBS (ENSMMSG00000010935)	PKNOX1 (ENSMMSG00000010868) #7	NDUFV3 (ENSMMSG00000010825) #8	WDR4 (ENSMMSG00000010788) #9	ENSMMSG00000010748	PDE9A (ENSMMSG00000010433) #10	SLC37A1 (ENSMMSG00000010340) #12	RSPH1 (ENSMMSG00000010274) #13	UBASH3A (ENSMMSG00000010155) #14	TMPRSS3 (ENSMMSG00000010004) #15	TFF1 (ENSMMSG00000009981) #16	TFF2 (ENSMMSG00000009956) #17	TFF3 (ENSMMSG00000009944) #18	ABCG1 (ENSMMSG00000009849) #19	UMODL1 (ENSMMSG00000009762) #20	ZBTB21 (ENSMMSG00000009739) #22	C2CD2 (ENSMMSG00000009701) #23	PRDM15 (ENSMMSG00000009607) #24	RIPK4 (ENSMMSG00000009579) #25	ENSMMSG00000009563	TMPRSS2 (ENSMMSG00000009350) #26	MX1 (ENSMMSG00000009295) #27	MX2 (ENSMMSG00000009201) #29	FAM3B (ENSMMSG00000009128) #30	BACE2 (ENSMMSG00000009034) #31	ENSMMSG00000009000
Bovidae	ANCESTRAL SPECIES	9	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238
Caprinae	ANCESTRAL SPECIES	8	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j.a.a	ENSGT00960000187239	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT01030000238221	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000158524.h
Rambouillet Sheep	MODERN SPECIES		U2AF1 (ENSOARG00020005608)	CBS (ENSOARG00020005385)	PKNOX1 (ENSOARG00020005292) #7	NDUFV3 (ENSOARG00020005254) #8	WDR4 (ENSOARG00020005224) #9	PDE9A (ENSOARG00020003783) #10	SLC37A1 (ENSOARG00020003631) #12	RSPH1 (ENSOARG00020003566) #13	UBASH3A (ENSOARG00020003453) #14	TMPRSS3 (ENSOARG00020003322) #15	TFF1 (ENSOARG00020003284) #16	TFF2 (ENSOARG00020003264) #17	TFF3 (ENSOARG00020003218) #18	ABCG1 (ENSOARG00020003108) #19	UMODL1 (ENSOARG00020002885) #20	ZBTB21 (ENSOARG00020002853) #22	C2CD2 (ENSOARG00020002824) #23	ENSOARG00020002815 #24	ENSOARG00020002794 #24	RIPK4 (ENSOARG00020002780) #25	ENSOARG00020002770	ENSOARG00020002764	ENSOARG00020002760	TMPRSS2 (ENSOARG00020002743) #26	MX1 (ENSOARG00020002706) #27	ENSOARG00020002693 #30	MX2 (ENSOARG00020002675) #29	ENSOARG00020002630 #30	BACE2 (ENSOARG00020002588) #31	ENSOARG00020002557	ENSOARG00020002543
Goat	MODERN SPECIES		U2AF1 (ENSCHIG00000012917)	CBS (ENSCHIG00000010679)	PKNOX1 (ENSCHIG00000019819) #7	ENSCHIG00000025996 #8	WDR4 (ENSCHIG00000022834) #9	PDE9A (ENSCHIG00000017496) #10	SLC37A1 (ENSCHIG00000019791) #12	RSPH1 (ENSCHIG00000017478) #13	UBASH3A (ENSCHIG00000022525) #14	TMPRSS3 (ENSCHIG00000010400) #15	TFF1 (ENSCHIG00000020308) #16	TFF2 (ENSCHIG00000026146) #17	TFF3 (ENSCHIG00000016300) #18	ABCG1 (ENSCHIG00000007254) #19	ENSCHIG00000016072 #20	ZBTB21 (ENSCHIG00000022184) #22	C2CD2 (ENSCHIG00000012559) #23	PRDM15 (ENSCHIG00000016222) #24	RIPK4 (ENSCHIG00000012268) #25	ENSCHIG00000008117	ENSCHIG00000011563	ENSCHIG00000007612	TMPRSS2 (ENSCHIG00000024477) #26	MX1 (ENSCHIG00000001865) #27	MX2 (ENSCHIG00000014150) #29	FAM3B (ENSCHIG00000017490) #30	ENSCHIG00000016035	BACE2 (ENSCHIG00000019839) #31	ENSCHIG00000015454	ENSCHIG00000025338	DSCAM (ENSCHIG00000010917)
Bovinae	ANCESTRAL SPECIES	6	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238
Bos	ANCESTRAL SPECIES	7	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267
Bos_a	ANCESTRAL SPECIES	5	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238
Domestic yak	MODERN SPECIES		U2AF1 (ENSBGRG00000020541)	CBS (ENSBGRG00000020259)	PKNOX1 (ENSBGRG00000020052) #7	ENSBGRG00000019941 #8	WDR4 (ENSBGRG00000019836) #9	PDE9A (ENSBGRG00000019109) #10	SLC37A1 (ENSBGRG00000018757) #12	RSPH1 (ENSBGRG00000018504) #13	UBASH3A (ENSBGRG00000018065) #14	TMPRSS3 (ENSBGRG00000017740) #15	TFF1 (ENSBGRG00000017683) #16	TFF2 (ENSBGRG00000017623) #17	TFF3 (ENSBGRG00000017602) #18	ABCG1 (ENSBGRG00000017210) #19	UMODL1 (ENSBGRG00000016109) #20	ZBTB21 (ENSBGRG00000016033) #22	C2CD2 (ENSBGRG00000015751) #23	ENSBGRG00000015730	PRDM15 (ENSBGRG00000014984) #24	RIPK4 (ENSBGRG00000014918) #25	ENSBGRG00000014892	ENSBGRG00000014875	ENSBGRG00000014855	TMPRSS2 (ENSBGRG00000014644) #26	MX1 (ENSBGRG00000014066) #27	FAM3B (ENSBGRG00000013649) #30	BACE2 (ENSBGRG00000013059) #31	DSCAM (ENSBGRG00000012032)	PCP4 (ENSBGRG00000011953)	ENSBGRG00000011865	ENSBGRG00000011815
Wild yak	MODERN SPECIES	530													TFF3 (ENSBMUG00000019437) #18	ABCG1 (ENSBMUG00000019411) #19	UMODL1 (ENSBMUG00000019328) #20	ENSBMUG00000019176 #22	C2CD2 (ENSBMUG00000019154) #23	PRDM15 (ENSBMUG00000019098) #24	RIPK4 (ENSBMUG00000019020) #25	ENSBMUG00000019002	ENSBMUG00000018987	ENSBMUG00000018981	TMPRSS2 (ENSBMUG00000018962) #26	MX1 (ENSBMUG00000018928) #27	MX2 (ENSBMUG00000018867) #29	FAM3B (ENSBMUG00000018837) #30	BACE2 (ENSBMUG00000018798) #31
Bos_b	ANCESTRAL SPECIES	5	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000161526.b.j.b	ENSGT00940000161526.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT01030000238221	ENSGT00940000154678.a.a	ENSGT00530000064267
Cow	MODERN SPECIES		U2AF1 (ENSBTAG00000011645)	CBS (ENSBTAG00000000160)	PKNOX1 (ENSBTAG00000014153) #7	NDUFV3 (ENSBTAG00000021491) #8	WDR4 (ENSBTAG00000021490) #9	PDE9A (ENSBTAG00000021899) #10	SLC37A1 (ENSBTAG00000021286) #12	RSPH1 (ENSBTAG00000021284) #13	UBASH3A (ENSBTAG00000023398) #14	TMPRSS3 (ENSBTAG00000021280) #15	TFF1 (ENSBTAG00000048276) #16	TFF2 (ENSBTAG00000030814) #17	TFF3 (ENSBTAG00000021276) #18	ABCG1 (ENSBTAG00000021272) #19	UMODL1 (ENSBTAG00000021270) #20	ZBTB21 (ENSBTAG00000030836) #22	C2CD2 (ENSBTAG00000021259) #23	PRDM15 (ENSBTAG00000021253) #24	RIPK4 (ENSBTAG00000021251) #25	ENSBTAG00000046015	ENSBTAG00000045771	ENSBTAG00000050235	TMPRSS2 (ENSBTAG00000009132) #26	MX1 (ENSBTAG00000030913) #27	MX2 (ENSBTAG00000008471) #29	FAM3B (ENSBTAG00000030921) #30	BACE2 (ENSBTAG00000000394) #31	ENSBTAG00000054486	DSCAM (ENSBTAG00000004754)	PCP4 (ENSBTAG00000051421)	IGSF5 (ENSBTAG00000002029)
Hybrid Bos Indicus	MODERN SPECIES		PKNOX1 (ENSBIXG00005021038) #7	ENSBIXG00005021053	ENSBIXG00005003567 #8	WDR4 (ENSBIXG00005007357) #9	ENSBIXG00005021172	PDE9A (ENSBIXG00005021300) #10	SLC37A1 (ENSBIXG00005021424) #12	RSPH1 (ENSBIXG00005021494) #13	UBASH3A (ENSBIXG00005021530) #14	TMPRSS3 (ENSBIXG00005021674) #15	TFF1 (ENSBIXG00005021693) #16	TFF2 (ENSBIXG00005003655) #17	ENSBIXG00005021724 #18	ABCG1 (ENSBIXG00005021948) #19	UMODL1 (ENSBIXG00005022204) #20	ENSBIXG00005022244 #22	C2CD2 (ENSBIXG00005022294) #23	ENSBIXG00005022313	PRDM15 (ENSBIXG00005022361) #24	RIPK4 (ENSBIXG00005022388) #25	ENSBIXG00005022411	ENSBIXG00005003820	ENSBIXG00005022425	TMPRSS2 (ENSBIXG00005003825) #26	MX1 (ENSBIXG00005022624) #27	MX2 (ENSBIXG00005022650) #29	FAM3B (ENSBIXG00005022792) #30	BACE2 (ENSBIXG00005022860) #31	ENSBIXG00005003909	DSCAM (ENSBIXG00005007073)	PCP4 (ENSBIXG00005003943)
Camelidae	ANCESTRAL SPECIES		ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Alpaca	MODERN SPECIES	6271																ZBTB21 (ENSVPAG00000001917) #22
Arabian camel	MODERN SPECIES		CBS (ENSCDRG00005012447)	PKNOX1 (ENSCDRG00005012370) #7	ENSCDRG00005012280 #8	WDR4 (ENSCDRG00005012149) #9	PDE9A (ENSCDRG00005011646) #10	SLC37A1 (ENSCDRG00005011351) #12	RSPH1 (ENSCDRG00005011160) #13	UBASH3A (ENSCDRG00005010989) #14	TMPRSS3 (ENSCDRG00005010719) #15	TFF1 (ENSCDRG00005010667) #16	ENSCDRG00005010635	TFF2 (ENSCDRG00005010588) #17	ENSCDRG00005010551 #18	ABCG1 (ENSCDRG00005010367) #19	UMODL1 (ENSCDRG00005010088) #20	ENSCDRG00005010047 #22	C2CD2 (ENSCDRG00005009991) #23	PRDM15 (ENSCDRG00005009685) #24	RIPK4 (ENSCDRG00005009625) #25	ENSCDRG00005009585	TMPRSS2 (ENSCDRG00005009423) #26	ENSCDRG00005009347 #27	ENSCDRG00005009289 #29	ENSCDRG00005009225 #27	ENSCDRG00005009188 #27	ENSCDRG00005009009 #29	FAM3B (ENSCDRG00005008840) #30	BACE2 (ENSCDRG00005008744) #31	DSCAM (ENSCDRG00005008610)	PCP4 (ENSCDRG00005008560)	ENSCDRG00005008490
Atlantogenata	ANCESTRAL SPECIES	92	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29
Afrotheria	ANCESTRAL SPECIES	109	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27	ENSGT00940000163266 #29
Afrotheria_a	ANCESTRAL SPECIES	115	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000162623 #16	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26
Elephant	MODERN SPECIES	513	U2AF1 (ENSLAFG00000011460)	CBS (ENSLAFG00000009950)	PKNOX1 (ENSLAFG00000011377) #7	NDUFV3 (ENSLAFG00000002098) #8	WDR4 (ENSLAFG00000021675) #9	PDE9A (ENSLAFG00000028539) #10	SLC37A1 (ENSLAFG00000005842) #12	RSPH1 (ENSLAFG00000014466) #13	UBASH3A (ENSLAFG00000012601) #14	TMPRSS3 (ENSLAFG00000031726) #15	ENSLAFG00000023145 #16	TFF2 (ENSLAFG00000021463) #17	TFF3 (ENSLAFG00000012686) #18	ABCG1 (ENSLAFG00000009158) #19	UMODL1 (ENSLAFG00000007706) #20	ZBTB21 (ENSLAFG00000003660) #22	C2CD2 (ENSLAFG00000008880) #23	PRDM15 (ENSLAFG00000008866) #24	RIPK4 (ENSLAFG00000008863) #25	TMPRSS2 (ENSLAFG00000027954) #26	MX2 (ENSLAFG00000009018) #29	ENSLAFG00000029694 #27	ENSLAFG00000016541 #27	FAM3B (ENSLAFG00000005755) #30	BACE2 (ENSLAFG00000027997) #31	DSCAM (ENSLAFG00000005372)	PCP4 (ENSLAFG00000017850)	ENSLAFG00000005039	ENSLAFG00000026827	ENSLAFG00000005853	ENSLAFG00000027123
Hyrax	MODERN SPECIES	10107																ZBTB21 (ENSPCAG00000008566) #22
Tenrec	MODERN SPECIES	14775																ZBTB21 (ENSETEG00000007191) #22
Xenarthra	ANCESTRAL SPECIES	883																ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686 #27
Sloth	MODERN SPECIES	6091																ZBTB21 (ENSCHOG00000013283) #22
Armadillo	MODERN SPECIES	2308																ZBTB21 (ENSDNOG00000005250) #22	C2CD2 (ENSDNOG00000039442) #23	PRDM15 (ENSDNOG00000033954) #24	RIPK4 (ENSDNOG00000019849) #25	TMPRSS2 (ENSDNOG00000047414) #26	MX1 (ENSDNOG00000008080) #27
Marsupialia	ANCESTRAL SPECIES	23								ENSGT00940000161940	ENSGT00870000136493.c	ENSGT00940000162802	ENSGT00890000139503	ENSGT00940000157806	ENSGT00390000007999	ENSGT00940000157962	ENSGT00940000154829	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.D	ENSGT00950000183107.a.b.a
Marsupialia_b	ANCESTRAL SPECIES	3								ENSGT00940000161940	ENSGT00870000136493.c	ENSGT00940000162802	ENSGT00890000139503	ENSGT00940000157806	ENSGT00390000007999	ENSGT00940000157962	ENSGT00940000154829	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.D	ENSGT00950000183107.a.b.a
Diprotodontia	ANCESTRAL SPECIES	32	ENSGT00950000182974.a.a.a.b	ENSGT00440000033329.b.a.a	ENSGT00940000157128	ENSGT01020000230360.c.b.b	ENSGT00940000154295	ENSGT00940000160744	ENSGT00950000183030.m.a.a.a.b	ENSGT00940000158977	ENSGT00940000161940	ENSGT00940000162802	ENSGT00890000139503	ENSGT00940000157806	ENSGT00390000007999	ENSGT00940000157962	ENSGT00940000154829	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a	ENSGT00940000158923
Diprotodontia_a	ANCESTRAL SPECIES	31	ENSGT00950000182974.a.a.a.b	ENSGT00440000033329.b.a.a	ENSGT00940000157128	ENSGT01020000230360.c.b.b	ENSGT00940000154295	ENSGT00940000160744	ENSGT00950000183030.m.a.a.a.b	ENSGT00940000158977	ENSGT00940000161940	ENSGT00940000162802	ENSGT00890000139503	ENSGT00940000157806	ENSGT00390000007999	ENSGT00940000157962	ENSGT00940000154829	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000160964.i	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a	ENSGT00940000158923
koala	MODERN SPECIES	285												NRIP1 (ENSPCIG00000014945)	USP25 (ENSPCIG00000022945)	ENSPCIG00000030908	ENSPCIG00000011012	ZBTB21 (ENSPCIG00000036467) #22	C2CD2 (ENSPCIG00000011008) #23	PRDM15 (ENSPCIG00000011005) #24	ENSPCIG00000011003	RIPK4 (ENSPCIG00000011000) #25	TMPRSS2 (ENSPCIG00000010999) #26	FAM3B (ENSPCIG00000010997) #30	BACE2 (ENSPCIG00000036487) #31
Common wonbat	MODERN SPECIES	1120						ENSVURG00010011224	ENSVURG00010011644	HSPA13 (ENSVURG00010020464)	SAMSN1 (ENSVURG00010020469)	NRIP1 (ENSVURG00010020486)	USP25 (ENSVURG00010020504)	ENSVURG00010020553	ENSVURG00010020560	ENSVURG00010020564	ENSVURG00010020582	ZBTB21 (ENSVURG00010020588) #22	C2CD2 (ENSVURG00010020605) #23	PRDM15 (ENSVURG00010020621) #24	RIPK4 (ENSVURG00010020636) #25	TMPRSS2 (ENSVURG00010020641) #26	FAM3B (ENSVURG00010020723) #30	BACE2 (ENSVURG00010020728) #31	ENSVURG00010020735	DSCAM (ENSVURG00010020750)	PCP4 (ENSVURG00010020798)	ENSVURG00010020802	ENSVURG00010020804	SH3BGR (ENSVURG00010020806)	LCA5L (ENSVURG00010020810)	GET1 (ENSVURG00010020815)	BRWD1 (ENSVURG00010020972)
Tasmanian devil	MODERN SPECIES	2	PDCL3 (ENSSHAG00000030938)	NPAS2 (ENSSHAG00000010526)	ENSSHAG00000021170	ENSSHAG00000011726	ENSSHAG00000020481	ENSSHAG00000013025	ENSSHAG00000024671	ENSSHAG00000002711	ENSSHAG00000003725	HSPA13 (ENSSHAG00000002912)	SAMSN1 (ENSSHAG00000003039)	NRIP1 (ENSSHAG00000022736)	ENSSHAG00000028405	USP25 (ENSSHAG00000006133)	ENSSHAG00000005309	ENSSHAG00000023375 #22	ENSSHAG00000002844 #24	ENSSHAG00000001558 #25	TMPRSS2 (ENSSHAG00000004952) #26	BACE2 (ENSSHAG00000005092) #31	DSCAM (ENSSHAG00000009089)	PCP4 (ENSSHAG00000010796)	B3GALT5 (ENSSHAG00000026882)	SH3BGR (ENSSHAG00000004155)	LCA5L (ENSSHAG00000002464)	GET1 (ENSSHAG00000024410)	ENSSHAG00000032232	ENSSHAG00000002554	ENSSHAG00000006419	ENSSHAG00000006972	ENSSHAG00000008206
Platypus	MODERN SPECIES	9	SIK1 (ENSOANG00000006466)	CRYAA (ENSOANG00000006464)	U2AF1 (ENSOANG00000006463)	CBS (ENSOANG00000006462)	PKNOX1 (ENSOANG00000006461) #7	ENSOANG00000006460 #8	WDR4 (ENSOANG00000006459) #9	PDE9A (ENSOANG00000006458) #10	SLC37A1 (ENSOANG00000006455) #12	RSPH1 (ENSOANG00000006454) #13	UBASH3A (ENSOANG00000006452) #14	TMPRSS3 (ENSOANG00000006451) #15	ENSOANG00000037039	ENSOANG00000006450 #18	ABCG1 (ENSOANG00000006449) #19	ZBTB21 (ENSOANG00000019605) #22	ENSOANG00000006446 #23	PRDM15 (ENSOANG00000006445) #24	ENSOANG00000006444	RIPK4 (ENSOANG00000006443) #25	TMPRSS2 (ENSOANG00000006438) #26	ENSOANG00000006437 #27	ENSOANG00000006433 #27	DSCAM (ENSOANG00000006430)	PCP4 (ENSOANG00000035160)	ENSOANG00000006429	ENSOANG00000006428	SH3BGR (ENSOANG00000040703)	GET1 (ENSOANG00000049347)	ENSOANG00000040624	BRWD1 (ENSOANG00000006422)
Sauria	ANCESTRAL SPECIES	2	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000164201	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT01070000254012	ENSGT00940000161334.g #17	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000164201	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000164201	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964.c	ENSGT00940000159847	ENSGT00560000077266.b
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334.g #17	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000164201	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964.d	ENSGT00940000160964.c	ENSGT00940000159847
Elapidae	ANCESTRAL SPECIES	10	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334.g #17	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.c.a #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964.d	ENSGT00940000160964.c	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00940000165905
Elapidae_a	ANCESTRAL SPECIES	64	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334.g #17	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.j #24	ENSGT00940000157890.i #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.c.a #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964.d	ENSGT00940000160964.c	ENSGT00940000159847
Acanthophiinae	ANCESTRAL SPECIES	58	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00990000211936	ENSGT00980000201888	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890.j #24	ENSGT00940000157890.i #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.c.a #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964.d	ENSGT00940000160964.c	ENSGT00940000159847
Eastern brown snake	MODERN SPECIES	62	CRYAA (ENSPTXG00000010601)	U2AF1 (ENSPTXG00000010599)	CBS (ENSPTXG00000010597)	ENSPTXG00000010547	PKNOX1 (ENSPTXG00000010546) #7	ENSPTXG00000010545 #8	PDE9A (ENSPTXG00000010544) #10	SLC37A1 (ENSPTXG00000010543) #12	UBASH3A (ENSPTXG00000010504) #14	TMPRSS3 (ENSPTXG00000010502) #15	ENSPTXG00000010501	ENSPTXG00000010500 #17	ENSPTXG00000010499 #17	ABCG1 (ENSPTXG00000010497) #19	UMODL1 (ENSPTXG00000010496) #20	ZBTB21 (ENSPTXG00000010495) #22	PRDM15 (ENSPTXG00000010491) #24	RIPK4 (ENSPTXG00000010486) #25	TMPRSS2 (ENSPTXG00000010484) #26	MX1 (ENSPTXG00000010245) #27	FAM3B (ENSPTXG00000010236) #30	BACE2 (ENSPTXG00000010234) #31
Mainland tiger snake	MODERN SPECIES	58	ENSNSUG00000007464	PKNOX1 (ENSNSUG00000007458) #7	ENSNSUG00000007457 #8	WDR4 (ENSNSUG00000007453) #9	PDE9A (ENSNSUG00000007354) #10	SLC37A1 (ENSNSUG00000007353) #12	RSPH1 (ENSNSUG00000007352) #13	UBASH3A (ENSNSUG00000007336) #14	TMPRSS3 (ENSNSUG00000007332) #15	ENSNSUG00000007331	ENSNSUG00000007329	TFF2 (ENSNSUG00000007328) #17	ENSNSUG00000007327	ABCG1 (ENSNSUG00000007324) #19	ENSNSUG00000007322 #20	ZBTB21 (ENSNSUG00000007320) #22	C2CD2 (ENSNSUG00000007317) #23	ENSNSUG00000007312 #24	ENSNSUG00000007308 #24	RIPK4 (ENSNSUG00000007293) #25	TMPRSS2 (ENSNSUG00000007292) #26	MX1 (ENSNSUG00000007203) #27	FAM3B (ENSNSUG00000007202) #30	BACE2 (ENSNSUG00000007201) #31	DSCAM (ENSNSUG00000007191)	PCP4 (ENSNSUG00000007189)	ENSNSUG00000007187	ENSNSUG00000007186	ENSNSUG00000007184	SH3BGR (ENSNSUG00000007181)
Blue-lipped sea krait	MODERN SPECIES	10815																ZBTB21 (ENSLLTG00000006922) #22
Indian cobra	MODERN SPECIES	4	ENSNNAG00000013036 #7	ENSNNAG00000013069 #7	ENSNNAG00000013081	WDR4 (ENSNNAG00000013106) #9	PDE9A (ENSNNAG00000013241) #10	SLC37A1 (ENSNNAG00000013807) #12	UBASH3A (ENSNNAG00000013860) #14	TMPRSS3 (ENSNNAG00000013964) #15	ENSNNAG00000013990 #17	ENSNNAG00000014007	ENSNNAG00000014012	ENSNNAG00000014021	ABCG1 (ENSNNAG00000014043) #19	ENSNNAG00000014142 #20	ENSNNAG00000014168	ZBTB21 (ENSNNAG00000014183) #22	C2CD2 (ENSNNAG00000014209) #23	PRDM15 (ENSNNAG00000014280) #24	RIPK4 (ENSNNAG00000014451) #25	TMPRSS2 (ENSNNAG00000014479) #26	ENSNNAG00000014519 #27	ENSNNAG00000014530 #27	FAM3B (ENSNNAG00000014550) #30	BACE2 (ENSNNAG00000014576) #31	DSCAM (ENSNNAG00000014616)	PCP4 (ENSNNAG00000014905)	ENSNNAG00000014920	ENSNNAG00000014931	SH3BGR (ENSNNAG00000014946)	LCA5L (ENSNNAG00000014964)	GET1 (ENSNNAG00000014983)
Lizard	MODERN SPECIES	2	ENSACAG00000040081	WDR4 (ENSACAG00000002741) #9	PDE9A (ENSACAG00000002778) #10	SLC37A1 (ENSACAG00000002938) #12	ENSACAG00000044666	RSPH1 (ENSACAG00000002948) #13	UBASH3A (ENSACAG00000003008) #14	TMPRSS3 (ENSACAG00000003022) #15	ENSACAG00000044509	ENSACAG00000042608 #17	ENSACAG00000003033 #17	ENSACAG00000027433	ABCG1 (ENSACAG00000003056) #19	ENSACAG00000038608	UMODL1 (ENSACAG00000003165) #20	ZBTB21 (ENSACAG00000003185) #22	C2CD2 (ENSACAG00000003189) #23	ENSACAG00000005374 #24	ENSACAG00000035551 #24	RIPK4 (ENSACAG00000005401) #25	TMPRSS2 (ENSACAG00000005446) #26	MX1 (ENSACAG00000005450) #27	ENSACAG00000023592	FAM3B (ENSACAG00000001496) #30	BACE2 (ENSACAG00000005800) #31	ENSACAG00000045102	ENSACAG00000041995	DSCAM (ENSACAG00000005358)	ENSACAG00000042918	ENSACAG00000036222	ENSACAG00000028616
Laterata	ANCESTRAL SPECIES		ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174.h #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334.g #17	ENSGT00980000201888	ENSGT00940000161334.h #17	ENSGT01070000254068	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000163947	ENSGT00940000160964.c	ENSGT00940000159847	ENSGT00560000077266.b
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000022227	PKNOX1 (ENSPMRG00000022216) #7	ENSPMRG00000022203 #8	ENSPMRG00000022158 #9	PDE9A (ENSPMRG00000022131) #10	SLC37A1 (ENSPMRG00000022118) #12	RSPH1 (ENSPMRG00000022107) #13	UBASH3A (ENSPMRG00000022100) #14	TMPRSS3 (ENSPMRG00000022090) #15	ENSPMRG00000022081	ENSPMRG00000022075	TFF2 (ENSPMRG00000022069) #17	ENSPMRG00000022054	ABCG1 (ENSPMRG00000022041) #19	UMODL1 (ENSPMRG00000021978) #20	ZBTB21 (ENSPMRG00000021961) #22	C2CD2 (ENSPMRG00000021944) #23	PRDM15 (ENSPMRG00000021892) #24	ENSPMRG00000021882 #25	ENSPMRG00000021866 #25	TMPRSS2 (ENSPMRG00000021850) #26	MX1 (ENSPMRG00000021831) #27	FAM3B (ENSPMRG00000021816) #30	BACE2 (ENSPMRG00000021807) #31	DSCAM (ENSPMRG00000021325)	PCP4 (ENSPMRG00000021191)	ENSPMRG00000021180	ENSPMRG00000021172	B3GALT5 (ENSPMRG00000021171)	SH3BGR (ENSPMRG00000021165)	LCA5L (ENSPMRG00000021152)
Argentine black and white tegu	MODERN SPECIES		ENSSMRG00000022913	PKNOX1 (ENSSMRG00000022914) #7	WDR4 (ENSSMRG00000022915) #9	ENSSMRG00000022916 #8	PDE9A (ENSSMRG00000022917) #10	SLC37A1 (ENSSMRG00000022919) #12	RSPH1 (ENSSMRG00000022920) #13	UBASH3A (ENSSMRG00000022921) #14	TMPRSS3 (ENSSMRG00000022922) #15	ENSSMRG00000022923	ENSSMRG00000022924 #17	ENSSMRG00000022925	ENSSMRG00000022926	ABCG1 (ENSSMRG00000022927) #19	UMODL1 (ENSSMRG00000022928) #20	ZBTB21 (ENSSMRG00000022929) #22	C2CD2 (ENSSMRG00000022931) #23	PRDM15 (ENSSMRG00000022932) #24	RIPK4 (ENSSMRG00000022933) #25	ENSSMRG00000022935	TMPRSS2 (ENSSMRG00000022936) #26	ENSSMRG00000022937 #27	ENSSMRG00000022938 #27	FAM3B (ENSSMRG00000022939) #30	BACE2 (ENSSMRG00000022940) #31	DSCAM (ENSSMRG00000022942)	PCP4 (ENSSMRG00000022976)	ENSSMRG00000022977	B3GALT5 (ENSSMRG00000022978)	ENSSMRG00000022979	SH3BGR (ENSSMRG00000022980)
tuatara	MODERN SPECIES	223						PDE9A (ENSSPUG00000013548) #10	SLC37A1 (ENSSPUG00000013491) #12	RSPH1 (ENSSPUG00000013475) #13	UBASH3A (ENSSPUG00000013461) #14	TMPRSS3 (ENSSPUG00000013451) #15	ENSSPUG00000013446	ENSSPUG00000013442 #17	ENSSPUG00000013427 #17	ENSSPUG00000013418	ENSSPUG00000013408 #20	ZBTB21 (ENSSPUG00000013401) #22	C2CD2 (ENSSPUG00000013392) #23	PRDM15 (ENSSPUG00000013355) #24	RIPK4 (ENSSPUG00000013338) #25	TMPRSS2 (ENSSPUG00000013196) #26	ENSSPUG00000013146 #27
Archelosauria	ANCESTRAL SPECIES		ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Cryptodira	ANCESTRAL SPECIES		ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334.j #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000155686.c #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505.bb #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334.j #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d.a #27	ENSGT00940000155686.d.b #27	ENSGT00940000155686.c.e #27	ENSGT00940000155686.c.f #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964
Emydidae	ANCESTRAL SPECIES	28	ENSGT00510000047027.n	ENSGT00940000159505.bb #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334.j #17	ENSGT01070000254068	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a.e #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d.a #27	ENSGT00940000155686.d.b #27	ENSGT00940000155686.c.e #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	10	ENSTMTG00000012690	ENSTMTG00000013846 #7	ENSTMTG00000013894 #8	ENSTMTG00000013902 #9	ENSTMTG00000013951 #10	ENSTMTG00000014424 #12	RSPH1 (ENSTMTG00000014483) #13	ENSTMTG00000014513 #14	ENSTMTG00000014626 #15	ENSTMTG00000014661	ENSTMTG00000014672	TFF2 (ENSTMTG00000014687) #17	ENSTMTG00000014694	ENSTMTG00000014703 #19	ENSTMTG00000014732 #20	ENSTMTG00000014802 #22	ENSTMTG00000014819 #23	ENSTMTG00000014892 #24	ENSTMTG00000014933	ENSTMTG00000014957 #25	ENSTMTG00000014978 #26	ENSTMTG00000015032 #27	ENSTMTG00000015041 #27	ENSTMTG00000015076 #27	ENSTMTG00000015411 #30	ENSTMTG00000015422 #31	ENSTMTG00000015467	ENSTMTG00000015776	ENSTMTG00000015787	ENSTMTG00000015795	ENSTMTG00000015810
Three-toed box turtle	MODERN SPECIES	11	U2AF1 (ENSTMTG00000020482)	ENSTMTG00000020485	ENSTMTG00000020526	ENSTMTG00000021113 #7	ENSTMTG00000021129	ENSTMTG00000021140 #9	ENSTMTG00000021194 #10	ENSTMTG00000021303 #12	ENSTMTG00000021326 #14	ENSTMTG00000021373 #15	ENSTMTG00000021391	ENSTMTG00000021397 #17	ENSTMTG00000021408	ENSTMTG00000021417 #19	ENSTMTG00000021439 #20	ENSTMTG00000021448 #22	ENSTMTG00000021482 #23	ENSTMTG00000021533 #24	ENSTMTG00000021549	ENSTMTG00000021556 #25	ENSTMTG00000021559 #26	ENSTMTG00000021573 #27	ENSTMTG00000021576 #27	ENSTMTG00000021585 #27	ENSTMTG00000021619 #30	ENSTMTG00000021626 #31	ENSTMTG00000021646	ENSTMTG00000021726	ENSTMTG00000021729	ENSTMTG00000021734	ENSTMTG00000021738
painted turtle	MODERN SPECIES	2389	BCOR (ENSCPBG00000012975)	HSF2BP (ENSCPBG00000012970)	SIK1 (ENSCPBG00000012966)	CRYAA (ENSCPBG00000012962)	U2AF1 (ENSCPBG00000012960)	CBS (ENSCPBG00000012958)	ENSCPBG00000012957	ENSCPBG00000012954	PKNOX1 (ENSCPBG00000012951) #7	ENSCPBG00000012948 #8	WDR4 (ENSCPBG00000012943) #9	PDE9A (ENSCPBG00000012938) #10	TFF3 (ENSCPBG00000012936) #18	ABCG1 (ENSCPBG00000012934) #19	UMODL1 (ENSCPBG00000012927) #20	ZBTB21 (ENSCPBG00000012923) #22	C2CD2 (ENSCPBG00000012921) #23	PRDM15 (ENSCPBG00000012917) #24	ENSCPBG00000012908	RIPK4 (ENSCPBG00000012906) #25	TMPRSS2 (ENSCPBG00000012905) #26	ENSCPBG00000012892 #27	ENSCPBG00000012852 #27	ENSCPBG00000012848 #27	FAM3B (ENSCPBG00000012846) #30	BACE2 (ENSCPBG00000012845) #31	DSCAM (ENSCPBG00000012456)	PCP4 (ENSCPBG00000012442)	IGSF5 (ENSCPBG00000012436)	B3GALT5 (ENSCPBG00000012433)	SH3BGR (ENSCPBG00000012430)
Testudinidae	ANCESTRAL SPECIES		ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505.bb #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334.j #17	ENSGT00940000162416 #18	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d.a #27	ENSGT00940000155686.d.b #27	ENSGT00940000155686.c.e #27	ENSGT00940000155686.c.f #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000160964	ENSGT00940000159847
Abingdon island giant tortoise	MODERN SPECIES	418															UMODL1 (ENSCABG00000016913) #20	ZBTB21 (ENSCABG00000016910) #22	C2CD2 (ENSCABG00000016905) #23	PRDM15 (ENSCABG00000016895) #24	ENSCABG00000016836	RIPK4 (ENSCABG00000016825) #25	ENSCABG00000016824	ENSCABG00000016823 #26	ENSCABG00000016822 #27	ENSCABG00000016699 #27	ENSCABG00000016695 #27
Goode s thornscrub tortoise	MODERN SPECIES		CRYAA (ENSGEVG00005000741)	U2AF1 (ENSGEVG00005000755)	CBS (ENSGEVG00005000807)	ENSGEVG00005000868	PKNOX1 (ENSGEVG00005000925) #7	ENSGEVG00005000977 #8	WDR4 (ENSGEVG00005000994) #9	PDE9A (ENSGEVG00005001079) #10	SLC37A1 (ENSGEVG00005001209) #12	UBASH3A (ENSGEVG00005001268) #14	TMPRSS3 (ENSGEVG00005001298) #15	ENSGEVG00005001325	TFF2 (ENSGEVG00005001355) #17	ABCG1 (ENSGEVG00005001379) #19	ENSGEVG00005001398 #20	ZBTB21 (ENSGEVG00005001414) #22	C2CD2 (ENSGEVG00005001430) #23	PRDM15 (ENSGEVG00005001471) #24	ENSGEVG00005001504	RIPK4 (ENSGEVG00005001522) #25	ENSGEVG00005001544 #26	ENSGEVG00005001562 #27	ENSGEVG00005001600 #27	ENSGEVG00005001700 #27	FAM3B (ENSGEVG00005001801) #30	BACE2 (ENSGEVG00005001818) #31	DSCAM (ENSGEVG00005001860)	PCP4 (ENSGEVG00005001894)	B3GALT5 (ENSGEVG00005001907)	SH3BGR (ENSGEVG00005001914)	LCA5L (ENSGEVG00005001928)
Chinese turtle	MODERN SPECIES	1640														ENSPSIG00000008853	ENSPSIG00000008846 #20	ZBTB21 (ENSPSIG00000000652) #22	C2CD2 (ENSPSIG00000008473) #23	PRDM15 (ENSPSIG00000006944) #24	ENSPSIG00000006452	RIPK4 (ENSPSIG00000006258) #25	TMPRSS2 (ENSPSIG00000017551) #26	ENSPSIG00000015810 #27	ENSPSIG00000011129 #27	FAM3B (ENSPSIG00000010681) #30	BACE2 (ENSPSIG00000009969) #31	ENSPSIG00000016399	ENSPSIG00000016397
Archosauria	ANCESTRAL SPECIES	2	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000155686.c #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847
Australian saltwater crocodile	MODERN SPECIES	27	SIK1 (ENSCPRG00005016431)	CRYAA (ENSCPRG00005016425)	U2AF1 (ENSCPRG00005016421)	CBS (ENSCPRG00005016418)	ENSCPRG00005016414	PKNOX1 (ENSCPRG00005016400) #7	ENSCPRG00005016392	WDR4 (ENSCPRG00005016385) #9	PDE9A (ENSCPRG00005016345) #10	SLC37A1 (ENSCPRG00005016286) #12	RSPH1 (ENSCPRG00005016260) #13	UBASH3A (ENSCPRG00005016241) #14	TMPRSS3 (ENSCPRG00005016234) #15	ABCG1 (ENSCPRG00005016219) #19	UMODL1 (ENSCPRG00005016194) #20	ZBTB21 (ENSCPRG00005016188) #22	C2CD2 (ENSCPRG00005016182) #23	PRDM15 (ENSCPRG00005016176) #24	ENSCPRG00005016167	RIPK4 (ENSCPRG00005016165) #25	TMPRSS2 (ENSCPRG00005016148) #26	ENSCPRG00005016141 #27	ENSCPRG00005016133 #27	ENSCPRG00005016122 #27	FAM3B (ENSCPRG00005016105) #30	BACE2 (ENSCPRG00005016096) #31	DSCAM (ENSCPRG00005016058)	PCP4 (ENSCPRG00005016038)	B3GALT5 (ENSCPRG00005016029)	ENSCPRG00005016026	ENSCPRG00005016025
Aves	ANCESTRAL SPECIES		ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT01070000254012	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
African ostrich	MODERN SPECIES	769	U2AF1 (ENSSCUG00000012146)	CBS (ENSSCUG00000012140)	ENSSCUG00000012127	PKNOX1 (ENSSCUG00000012117) #7	ENSSCUG00000012114 #8	WDR4 (ENSSCUG00000012111) #9	PDE9A (ENSSCUG00000012105) #10	SLC37A1 (ENSSCUG00000012095) #12	RSPH1 (ENSSCUG00000012092) #13	UBASH3A (ENSSCUG00000012087) #14	TMPRSS3 (ENSSCUG00000012081) #15	ENSSCUG00000012076	TFF2 (ENSSCUG00000012074) #17	ABCG1 (ENSSCUG00000012073) #19	ENSSCUG00000012067 #20	ZBTB21 (ENSSCUG00000012066) #22	C2CD2 (ENSSCUG00000012063) #23	PRDM15 (ENSSCUG00000012056) #24	ENSSCUG00000012048	RIPK4 (ENSSCUG00000012044) #25	TMPRSS2 (ENSSCUG00000012041) #26	MX1 (ENSSCUG00000012037) #27	FAM3B (ENSSCUG00000012033) #30	BACE2 (ENSSCUG00000012025) #31	DSCAM (ENSSCUG00000011964)	PCP4 (ENSSCUG00000011946)	ENSSCUG00000011943	B3GALT5 (ENSSCUG00000011940)	SH3BGR (ENSSCUG00000011939)	LCA5L (ENSSCUG00000011937)	GET1 (ENSSCUG00000011935)
Neognathae	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Phasianidae	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000164201	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a
Turkey	MODERN SPECIES		ENSMGAG00000017681	ENSMGAG00000014602	EFHC2 (ENSMGAG00000014603)	ENSMGAG00000014605	ENSMGAG00000014606	ENSMGAG00000014604	ENSMGAG00000014564 #31	ENSMGAG00000014572 #30	ENSMGAG00000014567 #26	ENSMGAG00000017801	ENSMGAG00000014565	ENSMGAG00000014566 #25	ENSMGAG00000014568 #24	ENSMGAG00000020084 #24	ENSMGAG00000014569 #23	ENSMGAG00000016169 #22	DSCAM (ENSMGAG00000014563)	IGSF5 (ENSMGAG00000014560)	B3GALT5 (ENSMGAG00000022407)	SH3BGR (ENSMGAG00000014561)	LCA5L (ENSMGAG00000014559)	GET1 (ENSMGAG00000014558)	BRWD1 (ENSMGAG00000014556)	PSMG1 (ENSMGAG00000014555)	ETS2 (ENSMGAG00000014554)	ERG (ENSMGAG00000014553)	KCNJ15 (ENSMGAG00000016167)	KCNJ6 (ENSMGAG00000014552)	DYRK1A (ENSMGAG00000014551)	VPS26C (ENSMGAG00000014550)	ENSMGAG00000014549
Chicken	MODERN SPECIES		U2AF1 (ENSGALG00010011880)	CBS (ENSGALG00010011839)	ENSGALG00010011814	PKNOX1 (ENSGALG00010011340) #7	NDUFV3 (ENSGALG00010011293) #8	WDR4 (ENSGALG00010011275) #9	PDE9A (ENSGALG00010011244) #10	SLC37A1 (ENSGALG00010011211) #12	RSPH1 (ENSGALG00010011185) #13	UBASH3A (ENSGALG00010011139) #14	TMPRSS3 (ENSGALG00010011125) #15	TFF3 (ENSGALG00010011115) #17	ABCG1 (ENSGALG00010011104) #19	ENSGALG00010011074	UMODL1 (ENSGALG00010011004) #20	ZBTB21 (ENSGALG00010010982) #22	C2CD2 (ENSGALG00010010991) #23	PRDM15 (ENSGALG00010010948) #24	RIPK4 (ENSGALG00010010941) #25	TMPRSS2 (ENSGALG00010013833) #26	MX1 (ENSGALG00010013809)	ENSGALG00010013778	FAM3B (ENSGALG00010013758) #30	BACE2 (ENSGALG00010013650) #31	DSCAM (ENSGALG00010013589)	PCP4 (ENSGALG00010013549)	IGSF5 (ENSGALG00010013504)	B3GALT5 (ENSGALG00010013492)	SH3BGR (ENSGALG00010013457)	LCA5L (ENSGALG00010013449)	WRB (ENSGALG00010013413)
Japanese quail	MODERN SPECIES		CRYAA (ENSCJPG00005008723)	U2AF1 (ENSCJPG00005008722)	CBS (ENSCJPG00005008721)	ENSCJPG00005008715	PKNOX1 (ENSCJPG00005008714) #7	ENSCJPG00005008713 #8	WDR4 (ENSCJPG00005008712) #9	PDE9A (ENSCJPG00005008711) #10	SLC37A1 (ENSCJPG00005008710) #12	RSPH1 (ENSCJPG00005008709) #13	UBASH3A (ENSCJPG00005008708) #14	TMPRSS3 (ENSCJPG00005008707) #15	TFF2 (ENSCJPG00005008691) #17	ABCG1 (ENSCJPG00005008689) #19	UMODL1 (ENSCJPG00005008688) #20	ZBTB21 (ENSCJPG00005008686) #22	C2CD2 (ENSCJPG00005008685) #23	PRDM15 (ENSCJPG00005008658) #24	RIPK4 (ENSCJPG00005008656) #25	TMPRSS2 (ENSCJPG00005008655) #26	MX2 (ENSCJPG00005008653) #29	FAM3B (ENSCJPG00005008650) #30	BACE2 (ENSCJPG00005008649) #31	ENSCJPG00005008648	DSCAM (ENSCJPG00005008335)	PCP4 (ENSCJPG00005008270)	IGSF5 (ENSCJPG00005008268)	B3GALT5 (ENSCJPG00005008266)	SH3BGR (ENSCJPG00005008263)	LCA5L (ENSCJPG00005008251)	GET1 (ENSCJPG00005008185)
Anatidae	ANCESTRAL SPECIES	6	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00940000163266 #29	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267.a	ENSGT00940000163947.a	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b
Pink-footed goose	MODERN SPECIES	92															UMODL1 (ENSABRG00000008812) #20	ZBTB21 (ENSABRG00000008780) #22	C2CD2 (ENSABRG00000008747) #23	PRDM15 (ENSABRG00000008548) #24	ENSABRG00000008465	RIPK4 (ENSABRG00000008447) #25	TMPRSS2 (ENSABRG00000008407) #26	ENSABRG00000008382	MX2 (ENSABRG00000008287) #29	FAM3B (ENSABRG00000008237) #30	BACE2 (ENSABRG00000008215) #31	DSCAM (ENSABRG00000008016)	PCP4 (ENSABRG00000007977)	IGSF5 (ENSABRG00000007955)	B3GALT5 (ENSABRG00000007941)	SH3BGR (ENSABRG00000007927)	LCA5L (ENSABRG00000007911)
Duck	MODERN SPECIES		CRYAA (ENSAPLG00000017972)	U2AF1 (ENSAPLG00000030109)	CBS (ENSAPLG00000009685)	ENSAPLG00000029470	PKNOX1 (ENSAPLG00000009259) #7	ENSAPLG00000001508 #8	WDR4 (ENSAPLG00000007171) #9	PDE9A (ENSAPLG00000007348) #10	SLC37A1 (ENSAPLG00000007435) #12	RSPH1 (ENSAPLG00000007969) #13	UBASH3A (ENSAPLG00000008138) #14	TMPRSS3 (ENSAPLG00000008634) #15	TFF2 (ENSAPLG00000020197) #17	ABCG1 (ENSAPLG00000008841) #19	ENSAPLG00000002409 #20	ZBTB21 (ENSAPLG00000000767) #22	C2CD2 (ENSAPLG00000001983) #23	PRDM15 (ENSAPLG00000001239) #24	ENSAPLG00000001186	RIPK4 (ENSAPLG00000016253) #25	TMPRSS2 (ENSAPLG00000016160) #26	MX1 (ENSAPLG00000015976) #27	FAM3B (ENSAPLG00000015920) #30	EIF1AX (ENSAPLG00000029362)	MAP7D2 (ENSAPLG00000005077)	BCLAF3 (ENSAPLG00000005332)	SH3KBP1 (ENSAPLG00000007164)	MAP3K15 (ENSAPLG00000007410)	ENSAPLG00000008450	ADGRG2 (ENSAPLG00000008909)	PHKA2 (ENSAPLG00000009522)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a
Great tit	MODERN SPECIES		U2AF1 (ENSPMJG00000010719)	ENSPMJG00000010715	CBS (ENSPMJG00000010712)	ENSPMJG00000010711	PKNOX1 (ENSPMJG00000010709) #7	ENSPMJG00000010687 #8	WDR4 (ENSPMJG00000010640) #9	PDE9A (ENSPMJG00000010631) #10	SLC37A1 (ENSPMJG00000010630) #12	RSPH1 (ENSPMJG00000010629) #13	UBASH3A (ENSPMJG00000010628) #14	TMPRSS3 (ENSPMJG00000010627) #15	TFF2 (ENSPMJG00000010586) #17	ABCG1 (ENSPMJG00000010585) #19	ENSPMJG00000010583 #20	ZBTB21 (ENSPMJG00000010582) #22	C2CD2 (ENSPMJG00000010580) #23	PRDM15 (ENSPMJG00000010516) #24	RIPK4 (ENSPMJG00000010510) #25	TMPRSS2 (ENSPMJG00000010504) #26	MX1 (ENSPMJG00000010501) #27	BACE2 (ENSPMJG00000010499) #31	DSCAM (ENSPMJG00000010433)	PCP4 (ENSPMJG00000010310)	IGSF5 (ENSPMJG00000010309)	B3GALT5 (ENSPMJG00000010307)	SH3BGR (ENSPMJG00000010241)	GET1 (ENSPMJG00000010237)	ENSPMJG00000010236	BRWD1 (ENSPMJG00000009831)	PSMG1 (ENSPMJG00000009827)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00730000113741	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a
Flycatcher	MODERN SPECIES		CRYAA (ENSFALG00000002001)	U2AF1 (ENSFALG00000027776)	CBS (ENSFALG00000001994)	PKNOX1 (ENSFALG00000001975) #7	ENSFALG00000001974 #8	WDR4 (ENSFALG00000027087) #9	PDE9A (ENSFALG00000001967) #10	SLC37A1 (ENSFALG00000001964) #12	RSPH1 (ENSFALG00000002230) #13	UBASH3A (ENSFALG00000002028) #14	TMPRSS3 (ENSFALG00000002042) #15	TFF2 (ENSFALG00000002051) #17	ABCG1 (ENSFALG00000002052) #19	ENSFALG00000028291	ENSFALG00000028853 #20	ZBTB21 (ENSFALG00000002056) #22	ENSFALG00000002057	PRDM15 (ENSFALG00000002064) #24	RIPK4 (ENSFALG00000002070) #25	TMPRSS2 (ENSFALG00000002079) #26	MX1 (ENSFALG00000002094) #27	FAM3B (ENSFALG00000002111) #30	BACE2 (ENSFALG00000029036) #31	DSCAM (ENSFALG00000004983)	PCP4 (ENSFALG00000025034)	IGSF5 (ENSFALG00000005004)	B3GALT5 (ENSFALG00000005008)	SH3BGR (ENSFALG00000005014)	ENSFALG00000005019	GET1 (ENSFALG00000028042)	BRWD1 (ENSFALG00000005039)
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589.d #15	ENSGT00940000158589.c #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589.d #15	ENSGT00940000158589.c #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000183107.a.b.a
Common canary	MODERN SPECIES	11	CRYAA (ENSSCAG00000011193)	U2AF1 (ENSSCAG00000011188)	CBS (ENSSCAG00000011177)	ENSSCAG00000011125	PKNOX1 (ENSSCAG00000011110) #7	ENSSCAG00000011106 #8	WDR4 (ENSSCAG00000011104) #9	PDE9A (ENSSCAG00000011039) #10	SLC37A1 (ENSSCAG00000011016) #12	RSPH1 (ENSSCAG00000011006) #13	UBASH3A (ENSSCAG00000010991) #14	TMPRSS3 (ENSSCAG00000010983) #15	TFF2 (ENSSCAG00000010978) #17	ABCG1 (ENSSCAG00000010972) #19	ENSSCAG00000010967 #20	ZBTB21 (ENSSCAG00000010963) #22	C2CD2 (ENSSCAG00000010957) #23	PRDM15 (ENSSCAG00000010947) #24	RIPK4 (ENSSCAG00000010937) #25	TMPRSS2 (ENSSCAG00000010931) #26	MX1 (ENSSCAG00000010924) #27	FAM3B (ENSSCAG00000010915) #30	BACE2 (ENSSCAG00000010911) #31	DSCAM (ENSSCAG00000010895)	PCP4 (ENSSCAG00000010888)	IGSF5 (ENSSCAG00000010884)	SETD4 (ENSSCAG00000010875)	CBR1 (ENSSCAG00000010872)	KCNE1 (ENSSCAG00000010868)	RCAN1 (ENSSCAG00000010862)	ENSSCAG00000010856
Zebra finch	MODERN SPECIES		CRYAA (ENSTGUG00000024562)	U2AF1 (ENSTGUG00000028798)	CBS (ENSTGUG00000005790)	ENSTGUG00000005778	PKNOX1 (ENSTGUG00000005745) #7	ENSTGUG00000005743 #8	WDR4 (ENSTGUG00000005733) #9	PDE9A (ENSTGUG00000005695) #10	SLC37A1 (ENSTGUG00000005671) #12	RSPH1 (ENSTGUG00000005646) #13	UBASH3A (ENSTGUG00000005618) #14	TMPRSS3 (ENSTGUG00000005582) #15	TFF2 (ENSTGUG00000005579) #17	ABCG1 (ENSTGUG00000005541) #19	UMODL1 (ENSTGUG00000005528) #20	ZBTB21 (ENSTGUG00000005526) #22	C2CD2 (ENSTGUG00000005496) #23	PRDM15 (ENSTGUG00000005437) #24	RIPK4 (ENSTGUG00000005420) #25	TMPRSS2 (ENSTGUG00000005348) #26	MX1 (ENSTGUG00000005326) #27	FAM3B (ENSTGUG00000005255) #30	BACE2 (ENSTGUG00000005268) #31	PCP4 (ENSTGUG00000005150)	ENSTGUG00000021600	B3GALT5 (ENSTGUG00000005144)	ENSTGUG00000005124	SH3BGR (ENSTGUG00000005133)	GET1 (ENSTGUG00000005116)	HMGN1 (ENSTGUG00000005112)	BRWD1 (ENSTGUG00000005062)
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	141	U2AF1 (ENSGFOG00000014496)	CBS (ENSGFOG00000014500)	ENSGFOG00000014502	PKNOX1 (ENSGFOG00000014506) #7	ENSGFOG00000014508 #8	WDR4 (ENSGFOG00000014511) #9	PDE9A (ENSGFOG00000014513) #10	SLC37A1 (ENSGFOG00000014521) #12	RSPH1 (ENSGFOG00000014528) #13	UBASH3A (ENSGFOG00000014531) #14	ENSGFOG00000014534 #15	ENSGFOG00000014535 #15	TFF2 (ENSGFOG00000014536) #17	ABCG1 (ENSGFOG00000014537) #19	ENSGFOG00000014538 #20	ZBTB21 (ENSGFOG00000014540) #22	C2CD2 (ENSGFOG00000014541) #23	PRDM15 (ENSGFOG00000014544) #24	RIPK4 (ENSGFOG00000014546) #25	TMPRSS2 (ENSGFOG00000014548) #26	MX1 (ENSGFOG00000014552) #27	FAM3B (ENSGFOG00000014554) #30	BACE2 (ENSGFOG00000014562) #31
Medium ground finch	MODERN SPECIES	697																ENSGFOG00000003926 #22
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027.m	ENSGT00510000047027.n	ENSGT00940000159505 #7	ENSGT00390000012196 #8	ENSGT00390000012174 #9	ENSGT00940000155587.a.b #10	ENSGT00940000159245 #12	ENSGT00940000157240 #13	ENSGT00940000160841 #14	ENSGT00940000158589 #15	ENSGT00940000161334 #17	ENSGT00940000160131 #19	ENSGT00940000159975 #20	ENSGT00940000161028 #22	ENSGT00530000063764.a #23	ENSGT00940000157890 #24	ENSGT00870000136508.c.b	ENSGT00940000159908 #25	ENSGT00940000155207.a.b #26	ENSGT00940000155686.d #27	ENSGT00950000183004.a.b.a.b #30	ENSGT00940000159548 #31	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163947	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b
Kakapo	MODERN SPECIES	11	CRYAA (ENSSHBG00005009784)	U2AF1 (ENSSHBG00005009756)	CBS (ENSSHBG00005000427)	ENSSHBG00005019355	PKNOX1 (ENSSHBG00005019349) #7	NDUFV3 (ENSSHBG00005019346) #8	WDR4 (ENSSHBG00005019343) #9	PDE9A (ENSSHBG00005019339) #10	SLC37A1 (ENSSHBG00005019286) #12	RSPH1 (ENSSHBG00005019277) #13	UBASH3A (ENSSHBG00005019270) #14	TMPRSS3 (ENSSHBG00005019269) #15	TFF2 (ENSSHBG00005019267) #17	ABCG1 (ENSSHBG00005019254) #19	ENSSHBG00005019243 #20	ZBTB21 (ENSSHBG00005019241) #22	C2CD2 (ENSSHBG00005019235) #23	PRDM15 (ENSSHBG00005019220) #24	ENSSHBG00005019212	RIPK4 (ENSSHBG00005019208) #25	TMPRSS2 (ENSSHBG00005019207) #26	MX1 (ENSSHBG00005019205) #27	FAM3B (ENSSHBG00005019204) #30	BACE2 (ENSSHBG00005019201) #31	DSCAM (ENSSHBG00005019146)	PCP4 (ENSSHBG00005019137)	B3GALT5 (ENSSHBG00005019133)	SH3BGR (ENSSHBG00005019130)	ENSSHBG00005019126	ENSSHBG00005019123	BRWD1 (ENSSHBG00005018061)
Golden eagle	MODERN SPECIES	23	CRYAA (ENSACCG00020000396)	U2AF1 (ENSACCG00020000366)	CBS (ENSACCG00020007976)	ENSACCG00020007941	PKNOX1 (ENSACCG00020007897) #7	NDUFV3 (ENSACCG00020007876) #8	WDR4 (ENSACCG00020007850) #9	PDE9A (ENSACCG00020007792) #10	SLC37A1 (ENSACCG00020007707) #12	RSPH1 (ENSACCG00020007688) #13	UBASH3A (ENSACCG00020007674) #14	TMPRSS3 (ENSACCG00020007654) #15	TFF2 (ENSACCG00020007620) #17	ABCG1 (ENSACCG00020007594) #19	UMODL1 (ENSACCG00020007566) #20	ZBTB21 (ENSACCG00020007548) #22	C2CD2 (ENSACCG00020007512) #23	PRDM15 (ENSACCG00020007436) #24	ENSACCG00020007388	RIPK4 (ENSACCG00020007325) #25	TMPRSS2 (ENSACCG00020007290) #26	MX1 (ENSACCG00020007248) #27	FAM3B (ENSACCG00020007233) #30	BACE2 (ENSACCG00020007183) #31	DSCAM (ENSACCG00020007031)	PCP4 (ENSACCG00020006869)	IGSF5 (ENSACCG00020006845)	B3GALT5 (ENSACCG00020006827)	SH3BGR (ENSACCG00020006813)	LCA5L (ENSACCG00020006800)	GET1 (ENSACCG00020006786)