Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329 #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Primates	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.b #14	ENSGT00940000155097 #13	ENSGT00390000015930.y.a.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00940000154629.B.db.b.b	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.b #14	ENSGT00940000155097 #13	ENSGT00440000039046.a #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.k #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00940000154629.B.db.b.b	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.b #14	ENSGT00940000155097 #13	ENSGT00440000039046.a #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.k #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.r #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.b #14	ENSGT00940000155097.x ##13	ENSGT00440000039046.a #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00910000148565 #23	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00950000182878.b.b.`b.a.a #30	ENSGT00940000155389.k #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.r #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.b #14	ENSGT00940000155097.x ##13	ENSGT00440000039046.a #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00910000148565 #23	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00950000182878.b.b.`b.a.a #30	ENSGT00940000155389.k #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b
Pan	ANCESTRAL SPECIES	21	ENSGT00390000009578 #7	ENSGT00390000017443.r #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.b #10	ENSGT00440000038159.p.a.a.a #12	ENSGT00390000015930.y.b #14	ENSGT00940000155097.w.b #13	ENSGT00440000039046.a #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00910000148565 #23	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00950000182878.b.b.`b.a.a #30	ENSGT00940000155389.k #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00990000203720.a.b.b.a.a.a #36	ENSGT00940000161645.a #37
Chimpanzee	MODERN SPECIES	18	CENPH (ENSPTRG00000016943) #7	MRPS36 (ENSPTRG00000016944) #8	CDK7 (ENSPTRG00000016946) #9	ENSPTRG00000050074 #10	CCDC125 (ENSPTRG00000016947) #11	ENSPTRG00000052641 #12	ENSPTRG00000052212 #13	AK6 (ENSPTRG00000016949) #14	RAD17 (ENSPTRG00000016950) #15	MARVELD2 (ENSPTRG00000016951) #16	OCLN (ENSPTRG00000016952) #17	ENSPTRG00000016953 #18	NAIP (ENSPTRG00000016954) #19	ENSPTRG00000016955 #20	ENSPTRG00000052273 #21	BDP1 (ENSPTRG00000016961) #22	ENSPTRG00000045517 #23	MCCC2 (ENSPTRG00000016963) #24	CARTPT (ENSPTRG00000016965) #25	MAP1B (ENSPTRG00000016966) #26	MRPS27 (ENSPTRG00000016967) #27	PTCD2 (ENSPTRG00000016968) #28	ZNF366 (ENSPTRG00000016969) #29	ENSPTRG00000046360 #30	TNPO1 (ENSPTRG00000016972) #31	ENSPTRG00000050315 #32	FCHO2 (ENSPTRG00000016973) #33	TMEM171 (ENSPTRG00000016977) #34	TMEM174 (ENSPTRG00000016978) #35	ENSPTRG00000051108 #36	FOXD1 (ENSPTRG00000047627) #37
Bonobo	MODERN SPECIES	18	CCNB1 (ENSPPAG00000043746)	CENPH (ENSPPAG00000039078) #7	ENSPPAG00000031742	CDK7 (ENSPPAG00000028259) #9	ENSPPAG00000038594 #10	CCDC125 (ENSPPAG00000039259) #11	ENSPPAG00000041239 #12	AK6 (ENSPPAG00000043237) #14	RAD17 (ENSPPAG00000043964) #15	MARVELD2 (ENSPPAG00000031481) #16	OCLN (ENSPPAG00000000071) #17	ENSPPAG00000036744 #18	NAIP (ENSPPAG00000040028) #19	ENSPPAG00000036640 #20	SERF1B (ENSPPAG00000038405)	BDP1 (ENSPPAG00000034418) #22	ENSPPAG00000036021 #23	MCCC2 (ENSPPAG00000044014) #24	CARTPT (ENSPPAG00000040635) #25	MAP1B (ENSPPAG00000031892) #26	MRPS27 (ENSPPAG00000038112) #27	PTCD2 (ENSPPAG00000028480) #28	ZNF366 (ENSPPAG00000042198) #29	ENSPPAG00000039984 #30	TNPO1 (ENSPPAG00000042518) #31	ENSPPAG00000028872 #32	FCHO2 (ENSPPAG00000027023) #33	TMEM171 (ENSPPAG00000031784) #34	TMEM174 (ENSPPAG00000031226) #35	ENSPPAG00000028226 #36	BTF3 (ENSPPAG00000025817)
Human	MODERN SPECIES	17	MRPS36 (ENSG00000134056) #8	CDK7 (ENSG00000134058) #9	CCDC125 (ENSG00000183323) #11	AK6 (ENSG00000085231) #14	TAF9 (ENSG00000273841) ##13	RAD17 (ENSG00000152942) #15	MARVELD2 (ENSG00000152939) #16	OCLN (ENSG00000197822) #17	GTF2H2C (ENSG00000183474) #18	SERF1B (ENSG00000205572)	SMN2 (ENSG00000205571) #20	SERF1A (ENSG00000172058)	SMN1 (ENSG00000172062) #20	NAIP (ENSG00000249437) #19	GTF2H2 (ENSG00000145736) #18	BDP1 (ENSG00000145734) #22	MCCC2 (ENSG00000131844) #24	CARTPT (ENSG00000164326) #25	MAP1B (ENSG00000131711) #26	MRPS27 (ENSG00000113048) #27	PTCD2 (ENSG00000049883) #28	ZNF366 (ENSG00000178175) #29	TNPO1 (ENSG00000083312) #31	FCHO2 (ENSG00000157107) #33	TMEM171 (ENSG00000157111) #34	TMEM174 (ENSG00000164325) #35	FOXD1 (ENSG00000251493) #37	BTF3 (ENSG00000145741)	ANKRA2 (ENSG00000164331)	UTP15 (ENSG00000164338)	ARHGEF28 (ENSG00000214944)
Gorilla	MODERN SPECIES	8	CENPH (ENSGGOG00000001525) #7	CDK7 (ENSGGOG00000013349) #9	ENSGGOG00000009793 #11	AK6 (ENSGGOG00000015545) #14	RAD17 (ENSGGOG00000015549) #15	MARVELD2 (ENSGGOG00000015558) #16	ENSGGOG00000011076 #17	ENSGGOG00000039886 #18	ENSGGOG00000023564	SMN1 (ENSGGOG00000003872) #20	ENSGGOG00000026020	ENSGGOG00000043788 #19	ENSGGOG00000039188	ENSGGOG00000026704 #20	ENSGGOG00000015749 #19	BDP1 (ENSGGOG00000000517) #22	ENSGGOG00000043029 #23	MCCC2 (ENSGGOG00000037809) #24	CARTPT (ENSGGOG00000004885) #25	MAP1B (ENSGGOG00000013655) #26	MRPS27 (ENSGGOG00000010683) #27	PTCD2 (ENSGGOG00000010695) #28	ZNF366 (ENSGGOG00000004981) #29	ENSGGOG00000024772 #30	TNPO1 (ENSGGOG00000026800) #31	ENSGGOG00000022549 #32	FCHO2 (ENSGGOG00000022902) #33	TMEM171 (ENSGGOG00000004346) #34	TMEM174 (ENSGGOG00000008689) #35	ENSGGOG00000000166	ANKRA2 (ENSGGOG00000003298)
Orangutan	MODERN SPECIES	18	CCNB1 (ENSPPYG00000015522)	MRPS36 (ENSPPYG00000015524) #7	CDK7 (ENSPPYG00000015525) #9	CCDC125 (ENSPPYG00000015526) #11	AK6 (ENSPPYG00000015527) ##14	TAF9 (ENSPPYG00000033333) #13	RAD17 (ENSPPYG00000015528) #15	ENSPPYG00000041012	MARVELD2 (ENSPPYG00000015529) #16	OCLN (ENSPPYG00000015530) #17	ENSPPYG00000015531 #18	NAIP (ENSPPYG00000015532) #19	SMN1 (ENSPPYG00000015533) #20	ENSPPYG00000030222	ENSPPYG00000039458	BDP1 (ENSPPYG00000015535) #22	MCCC2 (ENSPPYG00000015539) #24	CARTPT (ENSPPYG00000015540) #25	MAP1B (ENSPPYG00000030409) #26	MRPS27 (ENSPPYG00000015542) #27	PTCD2 (ENSPPYG00000015543) #28	ZNF366 (ENSPPYG00000015544) #29	TNPO1 (ENSPPYG00000015545) #31	FCHO2 (ENSPPYG00000015546) #33	TMEM171 (ENSPPYG00000015547) #34	TMEM174 (ENSPPYG00000015548) #35	FOXD1 (ENSPPYG00000033582) #37	BTF3 (ENSPPYG00000029576)	ANKRA2 (ENSPPYG00000015549)	UTP15 (ENSPPYG00000015550)	ARHGEF28 (ENSPPYG00000015553)
Gibbon	MODERN SPECIES	8	PIK3R1 (ENSNLEG00000003893)	SLC30A5 (ENSNLEG00000003953)	CCNB1 (ENSNLEG00000004008)	CENPH (ENSNLEG00000033954) #7	ENSNLEG00000032136 #8	CDK7 (ENSNLEG00000026726) #9	CCDC125 (ENSNLEG00000004078) #11	AK6 (ENSNLEG00000029253) #14	RAD17 (ENSNLEG00000004118) #15	MARVELD2 (ENSNLEG00000004246) #16	OCLN (ENSNLEG00000004262) #17	ENSNLEG00000004315 #18	NAIP (ENSNLEG00000004412) #19	ENSNLEG00000004454 #20	SERF1B (ENSNLEG00000004470)	BDP1 (ENSNLEG00000004472) #22	MCCC2 (ENSNLEG00000004496) #24	CARTPT (ENSNLEG00000004509) #25	ENSNLEG00000030780 #26	ENSNLEG00000032219 #27	PTCD2 (ENSNLEG00000004516) #28	ZNF366 (ENSNLEG00000004555) #29	TNPO1 (ENSNLEG00000004572) #31	FCHO2 (ENSNLEG00000004635) #33	ENSNLEG00000028575	TMEM171 (ENSNLEG00000028951) #34	TMEM174 (ENSNLEG00000004713) #35	ENSNLEG00000031333	ENSNLEG00000027304	ENSNLEG00000032757	ANKRA2 (ENSNLEG00000004739)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.a.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.a ##14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00940000154629.B.db.b.b	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.a.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.a ##14	ENSGT00940000155097 #13	ENSGT00390000015930.y.a.b.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228
Vervet Monkey	MODERN SPECIES	23	ENSCSAG00000015881	SLC30A5 (ENSCSAG00000015873)	CCNB1 (ENSCSAG00000015867)	CENPH (ENSCSAG00000015861) #7	CDK7 (ENSCSAG00000015846) #9	CCDC125 (ENSCSAG00000015817) #11	ENSCSAG00000015802 ##14	RAD17 (ENSCSAG00000015775) #15	MARVELD2 (ENSCSAG00000015724) #16	OCLN (ENSCSAG00000015720) #17	ENSCSAG00000015712 #18	NAIP (ENSCSAG00000015702) #19	ENSCSAG00000015688 #20	ENSCSAG00000019010	SERF1A (ENSCSAG00000015655)	BDP1 (ENSCSAG00000015649) #22	MCCC2 (ENSCSAG00000015635) #24	CARTPT (ENSCSAG00000015631) #25	MAP1B (ENSCSAG00000015629) #26	MRPS27 (ENSCSAG00000015626) #27	PTCD2 (ENSCSAG00000015623) #28	ZNF366 (ENSCSAG00000015620) #29	TNPO1 (ENSCSAG00000015616) #31	FCHO2 (ENSCSAG00000015597) #33	TMEM171 (ENSCSAG00000015548) #34	TMEM174 (ENSCSAG00000015532) #35	ENSCSAG00000019011	BTF3 (ENSCSAG00000015522)	ANKRA2 (ENSCSAG00000015506)	UTP15 (ENSCSAG00000015499)	ARHGEF28 (ENSCSAG00000015492)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.a.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.a ##14	ENSGT00940000155097 #13	ENSGT00390000015930.y.a.b.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT01100000263509.a.a.b.a.b	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00950000182802.B.a.a.a.a.h.b.b	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.a.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.a ##14	ENSGT00940000155097 #13	ENSGT00390000015930.y.a.b.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT01100000263509.a.a.b.a.b	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.j #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00950000182802.B.a.a.a.a.h.b.b	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT00390000000566.r.b.b.a.b	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.a.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.b.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.j #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228
Sooty mangabey	MODERN SPECIES	296	ENSCATG00000037676	SLC30A5 (ENSCATG00000040127)	CCNB1 (ENSCATG00000042694)	CENPH (ENSCATG00000021125) #7	ENSCATG00000014072 #8	CDK7 (ENSCATG00000035950) #9	CCDC125 (ENSCATG00000044342) #11	ENSCATG00000026064 ##14	RAD17 (ENSCATG00000038902) #15	MARVELD2 (ENSCATG00000012647) #16	OCLN (ENSCATG00000036775) #17	ENSCATG00000041678 #18	NAIP (ENSCATG00000006530) #19	ENSCATG00000037002 #20	SERF1B (ENSCATG00000038634)	BDP1 (ENSCATG00000042031) #22	MCCC2 (ENSCATG00000031278) #24	CARTPT (ENSCATG00000043389) #25	MAP1B (ENSCATG00000044402) #26	MRPS27 (ENSCATG00000034419) #27	PTCD2 (ENSCATG00000019069) #28	ZNF366 (ENSCATG00000040573) #29	ENSCATG00000043792 #31	ENSCATG00000044660 #32	FCHO2 (ENSCATG00000034829) #33	TMEM171 (ENSCATG00000042228) #34	TMEM174 (ENSCATG00000036156) #35	FOXD1 (ENSCATG00000017156) #37	BTF3 (ENSCATG00000014918)	ANKRA2 (ENSCATG00000030220)	UTP15 (ENSCATG00000008006)
Drill	MODERN SPECIES	920	SLC30A5 (ENSMLEG00000034999)	CCNB1 (ENSMLEG00000028961)	CENPH (ENSMLEG00000044027) #7	ENSMLEG00000030575 #8	CDK7 (ENSMLEG00000033423) #9	CCDC125 (ENSMLEG00000031382) #11	ENSMLEG00000027963	ENSMLEG00000034693 ##14	RAD17 (ENSMLEG00000031020) #15	MARVELD2 (ENSMLEG00000043869) #16	OCLN (ENSMLEG00000021655) #17	ENSMLEG00000029785 #18	NAIP (ENSMLEG00000036154) #19	ENSMLEG00000041902 #20	SERF1B (ENSMLEG00000020172)	BDP1 (ENSMLEG00000026247) #22	MCCC2 (ENSMLEG00000027385) #24	CARTPT (ENSMLEG00000042264) #25	MAP1B (ENSMLEG00000035488) #26	MRPS27 (ENSMLEG00000028172) #27	PTCD2 (ENSMLEG00000031093) #28	ZNF366 (ENSMLEG00000033228) #29
Olive baboon	MODERN SPECIES	15	ENSPANG00000025511	CCNB1 (ENSPANG00000020425)	CENPH (ENSPANG00000032466) #7	ENSPANG00000045442 #8	CDK7 (ENSPANG00000032872) #9	CCDC125 (ENSPANG00000012021) #11	AK6 (ENSPANG00000018860) ##14	TAF9 (ENSPANG00000007970) #13	RAD17 (ENSPANG00000015469) #15	MARVELD2 (ENSPANG00000003863) #16	OCLN (ENSPANG00000025612) #17	ENSPANG00000014044 #18	NAIP (ENSPANG00000024796) #19	ENSPANG00000013601 #20	SERF1B (ENSPANG00000030848)	BDP1 (ENSPANG00000009350) #22	ENSPANG00000049242	MCCC2 (ENSPANG00000011937) #24	CARTPT (ENSPANG00000041351) #25	MAP1B (ENSPANG00000013347) #26	MRPS27 (ENSPANG00000015368) #27	PTCD2 (ENSPANG00000006611) #28	ZNF366 (ENSPANG00000023914) #29	ENSPANG00000037799	TNPO1 (ENSPANG00000006074) #31	FCHO2 (ENSPANG00000014043) #33	ENSPANG00000040821	TMEM171 (ENSPANG00000017933) #34	TMEM174 (ENSPANG00000017251) #35	ENSPANG00000042783	ENSPANG00000044736
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000000566.r.b.b.a.b	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.b.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.b.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT01100000263509.a.a.b.a.b	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT01040000240503.B.eb.b #32	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00950000182802.B.a.a.a.a.h.b.b	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a
Pig-tailed macaque	MODERN SPECIES	533	ENSMNEG00000037404	SLC30A5 (ENSMNEG00000033492)	CCNB1 (ENSMNEG00000003080)	CENPH (ENSMNEG00000044307) #7	ENSMNEG00000045052 #8	CDK7 (ENSMNEG00000027189) #9	CCDC125 (ENSMNEG00000034005) #11	ENSMNEG00000033183 ##14	RAD17 (ENSMNEG00000035710) #15	MARVELD2 (ENSMNEG00000044844) #16	OCLN (ENSMNEG00000035807) #17	ENSMNEG00000034520 #18	NAIP (ENSMNEG00000030447) #19	ENSMNEG00000035094 #20	SERF1B (ENSMNEG00000031009)	BDP1 (ENSMNEG00000037217) #22	MCCC2 (ENSMNEG00000028784) #24	CARTPT (ENSMNEG00000041443) #25	MAP1B (ENSMNEG00000030192) #26	MRPS27 (ENSMNEG00000038426) #27	PTCD2 (ENSMNEG00000007537) #28	ZNF366 (ENSMNEG00000041882) #29	TNPO1 (ENSMNEG00000044581) #31	ENSMNEG00000029785 #32	FCHO2 (ENSMNEG00000038505) #33	TMEM171 (ENSMNEG00000042146) #34	TMEM174 (ENSMNEG00000032405) #35	ENSMNEG00000027924	FOXD1 (ENSMNEG00000043099) #37	BTF3 (ENSMNEG00000044350)	ANKRA2 (ENSMNEG00000030102)
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.b.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT01100000263509.a.a.b.a.b	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b.m.b	ENSGT00940000157156	ENSGT00390000004228
Rhesus	MODERN SPECIES	16	ENSMMUG00000051351	PIK3R1 (ENSMMUG00000011532)	SLC30A5 (ENSMMUG00000018143)	CCNB1 (ENSMMUG00000018142)	CENPH (ENSMMUG00000030035) #7	MRPS36 (ENSMMUG00000045336) #8	CDK7 (ENSMMUG00000018621) #9	TAF9 (ENSMMUG00000046550) #11	RAD17 (ENSMMUG00000014881) #15	MARVELD2 (ENSMMUG00000009158) #16	OCLN (ENSMMUG00000006216) #17	GTF2H2 (ENSMMUG00000006217) #18	NAIP (ENSMMUG00000020215) #19	SMN1 (ENSMMUG00000020214) #20	SERF1B (ENSMMUG00000053770)	BDP1 (ENSMMUG00000009057) #22	ENSMMUG00000061071	MCCC2 (ENSMMUG00000015175) #24	CARTPT (ENSMMUG00000015177) #25	MAP1B (ENSMMUG00000017904) #26	MRPS27 (ENSMMUG00000017905) #27	PTCD2 (ENSMMUG00000017908) #28	ZNF366 (ENSMMUG00000003586) #29	TNPO1 (ENSMMUG00000020923) #31	FCHO2 (ENSMMUG00000015422) #33	ENSMMUG00000055761	TMEM171 (ENSMMUG00000015433) #34	TMEM174 (ENSMMUG00000021099) #35	FOXD1 (ENSMMUG00000040510) #37	BTF3 (ENSMMUG00000022291)	ANKRA2 (ENSMMUG00000023513)
Crab-eating macaque	MODERN SPECIES	16	SLC30A5 (ENSMFAG00000036926)	CCNB1 (ENSMFAG00000041544)	CENPH (ENSMFAG00000003204) #7	ENSMFAG00000034129 #8	CDK7 (ENSMFAG00000001451) #9	ENSMFAG00000052897	CCDC125 (ENSMFAG00000039708) #11	TAF9 (ENSMFAG00000043011) #13	RAD17 (ENSMFAG00000031075) #15	MARVELD2 (ENSMFAG00000044604) #16	OCLN (ENSMFAG00000034647) #17	ENSMFAG00000035400 #18	NAIP (ENSMFAG00000039341) #19	ENSMFAG00000031523 #20	SERF1B (ENSMFAG00000048215)	BDP1 (ENSMFAG00000041440) #22	ENSMFAG00000058572	MCCC2 (ENSMFAG00000001283) #24	CARTPT (ENSMFAG00000035639) #25	ENSMFAG00000062068	MAP1B (ENSMFAG00000044363) #26	MRPS27 (ENSMFAG00000030039) #27	PTCD2 (ENSMFAG00000031516) #28	ZNF366 (ENSMFAG00000001780) #29	TNPO1 (ENSMFAG00000003636) #31	FCHO2 (ENSMFAG00000030926) #33	TMEM171 (ENSMFAG00000032334) #34	TMEM174 (ENSMFAG00000002335) #35	ENSMFAG00000053908	ENSMFAG00000056336	FOXD1 (ENSMFAG00000049955) #37
Rhinopithecus	ANCESTRAL SPECIES	114	ENSGT00390000000566.q.b.b	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.t.b.a #8	ENSGT00940000155179.c.a #9	ENSGT00440000039958 #11	ENSGT00390000015930.y.a.a ##14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.`b #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155351.bb.c.b	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00940000154629.B.db.b.b	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00990000203720.a.b.b.a.b ##36	ENSGT00940000153288.a.b.a.b.m	ENSGT00940000157156
Black snub-nosed monkey	MODERN SPECIES	1015	ENSRBIG00000030902	SLC30A5 (ENSRBIG00000039754)	CCNB1 (ENSRBIG00000031625)	CENPH (ENSRBIG00000042490) #7	ENSRBIG00000004514 #8	CDK7 (ENSRBIG00000029386) #9	CCDC125 (ENSRBIG00000011189) #11	ENSRBIG00000034939 ##14	RAD17 (ENSRBIG00000043552) #15	MARVELD2 (ENSRBIG00000038179) #16	OCLN (ENSRBIG00000000772) #17	ENSRBIG00000043303 #18	NAIP (ENSRBIG00000035489) #19	ENSRBIG00000037052 #20	SERF1B (ENSRBIG00000044524)	BDP1 (ENSRBIG00000042329) #22	MCCC2 (ENSRBIG00000036318) #24	CARTPT (ENSRBIG00000006623) #25	MAP1B (ENSRBIG00000031211) #26	MRPS27 (ENSRBIG00000013185) #27	PTCD2 (ENSRBIG00000032929) #28	ENSRBIG00000000335	ZNF366 (ENSRBIG00000037679) #29	TNPO1 (ENSRBIG00000021642) #31	FCHO2 (ENSRBIG00000007669) #33	ENSRBIG00000002036	TMEM171 (ENSRBIG00000037267) #34	TMEM174 (ENSRBIG00000036025) #35	ENSRBIG00000029002 ##36	ENSRBIG00000028164	ANKRA2 (ENSRBIG00000035499)
Golden snub-nosed monkey	MODERN SPECIES	2210	SLC30A5 (ENSRROG00000041297)	CCNB1 (ENSRROG00000044694)	CENPH (ENSRROG00000037939) #7	ENSRROG00000045561 #8	CDK7 (ENSRROG00000040620) #9	CCDC125 (ENSRROG00000044805) #11	ENSRROG00000044626 #10	ENSRROG00000032815 ##14	RAD17 (ENSRROG00000030212) #15	MARVELD2 (ENSRROG00000032883) #16	OCLN (ENSRROG00000041530) #17	ENSRROG00000039091 #18	NAIP (ENSRROG00000043295) #19	ENSRROG00000039399 #20	SERF1B (ENSRROG00000038080)	BDP1 (ENSRROG00000031352) #22	MCCC2 (ENSRROG00000037562) #24	CARTPT (ENSRROG00000041216) #25	MAP1B (ENSRROG00000035782) #26	MRPS27 (ENSRROG00000040560) #27	PTCD2 (ENSRROG00000000080) #28	ENSRROG00000027984	ZNF366 (ENSRROG00000035440) #29
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.x #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.m.b #31	ENSGT00940000155389.m.a #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.a.h.b
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000153773.a.b.b.s	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586.u.a	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.x #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.m.b #31	ENSGT00940000155389.m.a #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.a.h.b
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586.u.a	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.x #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.m.b #31	ENSGT00940000155389.m.a #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.a.h.b	ENSGT00940000157156
Capuchin	MODERN SPECIES	50	ENSCCAG00000028914	ENSCCAG00000024915	MRPS36 (ENSCCAG00000020995) #8	CDK7 (ENSCCAG00000029757) #9	ENSCCAG00000029589	CCDC125 (ENSCCAG00000025219) #11	AK6 (ENSCCAG00000021405) #14	RAD17 (ENSCCAG00000037823) #15	MARVELD2 (ENSCCAG00000029566) #16	ENSCCAG00000031439	ENSCCAG00000019925	OCLN (ENSCCAG00000021176) #17	ENSCCAG00000031800 #18	ENSCCAG00000018127 #20	SERF1B (ENSCCAG00000031324)	BDP1 (ENSCCAG00000033596) #22	MCCC2 (ENSCCAG00000033706) #24	ENSCCAG00000020273	CARTPT (ENSCCAG00000021730) #25	ENSCCAG00000026040	ENSCCAG00000033067	MAP1B (ENSCCAG00000025393) #26	MRPS27 (ENSCCAG00000030550) #27	ENSCCAG00000029389 #28	ZNF366 (ENSCCAG00000021177) #29	TNPO1 (ENSCCAG00000026472) #31	FCHO2 (ENSCCAG00000020869) #33	TMEM171 (ENSCCAG00000032407) #34	TMEM174 (ENSCCAG00000026904) #35	FOXD1 (ENSCCAG00000006678) #37	ENSCCAG00000033236
Bolivian squirrel monkey	MODERN SPECIES	57	ENSSBOG00000026437	PIK3R1 (ENSSBOG00000035684)	ENSSBOG00000036001	ENSSBOG00000021871	ENSSBOG00000030324	CENPH (ENSSBOG00000023460) #7	MRPS36 (ENSSBOG00000032201) #8	ENSSBOG00000019745 #9	CCDC125 (ENSSBOG00000004956) #11	ENSSBOG00000033558 #14	RAD17 (ENSSBOG00000031202) #15	MARVELD2 (ENSSBOG00000021581) #16	OCLN (ENSSBOG00000027257) #17	ENSSBOG00000032585 #18	ENSSBOG00000011665 #20	BDP1 (ENSSBOG00000030056) #22	ENSSBOG00000035410	MCCC2 (ENSSBOG00000001919) #24	CARTPT (ENSSBOG00000021397) #25	ENSSBOG00000034738	MAP1B (ENSSBOG00000031805) #26	MRPS27 (ENSSBOG00000030386) #27	PTCD2 (ENSSBOG00000018911) #28	ZNF366 (ENSSBOG00000032832) #29	TNPO1 (ENSSBOG00000029256) #31	ENSSBOG00000031318	FCHO2 (ENSSBOG00000025503) #33	TMEM171 (ENSSBOG00000024798) #34	TMEM174 (ENSSBOG00000021322) #35	ENSSBOG00000019742	ENSSBOG00000034338
Marmoset	MODERN SPECIES	11	ENSCJAG00000081809	SLC30A5 (ENSCJAG00000016039)	ENSCJAG00000016075	CENPH (ENSCJAG00000016089) #7	MRPS36 (ENSCJAG00000038451) #8	CDK7 (ENSCJAG00000016093) #9	CCDC125 (ENSCJAG00000016122) #11	AK6 (ENSCJAG00000036421) #14	RAD17 (ENSCJAG00000016163) #15	MARVELD2 (ENSCJAG00000016202) #16	OCLN (ENSCJAG00000016225) #17	ENSCJAG00000016246 #18	ENSCJAG00000078106	ENSCJAG00000016290 #20	ENSCJAG00000040035	BDP1 (ENSCJAG00000034364) #22	MCCC2 (ENSCJAG00000016310) #24	ENSCJAG00000073883	CARTPT (ENSCJAG00000048631) #25	ENSCJAG00000070641	ENSCJAG00000071792	MAP1B (ENSCJAG00000016333) #26	MRPS27 (ENSCJAG00000016356) #27	PTCD2 (ENSCJAG00000016364) #28	ZNF366 (ENSCJAG00000016387) #29	ENSCJAG00000083074	TNPO1 (ENSCJAG00000016409) #31	FCHO2 (ENSCJAG00000016496) #33	TMEM171 (ENSCJAG00000016582) #34	ENSCJAG00000078294	TMEM174 (ENSCJAG00000034922) #35
Mas night monkey	MODERN SPECIES	670	SLC30A5 (ENSANAG00000030835)	CCNB1 (ENSANAG00000028945)	CENPH (ENSANAG00000030878) #7	MRPS36 (ENSANAG00000037440) #8	CDK7 (ENSANAG00000028695) #9	ENSANAG00000035203	CCDC125 (ENSANAG00000015764) #11	ENSANAG00000031106 ##10	ENSANAG00000020810 #14	RAD17 (ENSANAG00000027512) #15	MARVELD2 (ENSANAG00000032479) #16	OCLN (ENSANAG00000026281) #17	ENSANAG00000029734 #18	ENSANAG00000032133 #20	SERF1B (ENSANAG00000026832)	BDP1 (ENSANAG00000032496) #22	MCCC2 (ENSANAG00000028246) #24	CARTPT (ENSANAG00000038339) #25	MAP1B (ENSANAG00000023635) #26	MRPS27 (ENSANAG00000019419) #27	PTCD2 (ENSANAG00000029353) #28	ZNF366 (ENSANAG00000030039) #29	ENSANAG00000022453 #31	FCHO2 (ENSANAG00000026925) #33	TMEM174 (ENSANAG00000027975) #35	FOXD1 (ENSANAG00000029094) #37	ENSANAG00000032267	ANKRA2 (ENSANAG00000038270)	UTP15 (ENSANAG00000033884)	ARHGEF28 (ENSANAG00000026871)	ENC1 (ENSANAG00000020131)
Tarsier	MODERN SPECIES	6140											OCLN (ENSTSYG00000008618) #17	ENSTSYG00000030101 #18	NAIP (ENSTSYG00000032993)	ENSTSYG00000012058 #20	ENSTSYG00000026617	ENSTSYG00000032199 #22	MCCC2 (ENSTSYG00000002107) #24	CARTPT (ENSTSYG00000010828) #25
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.u.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Mouse lemur	MODERN SPECIES	3	PIK3R1 (ENSMICG00000044724)	SLC30A5 (ENSMICG00000013423)	CCNB1 (ENSMICG00000034804)	CENPH (ENSMICG00000013448) #7	ENSMICG00000031579 #8	CDK7 (ENSMICG00000013463) #9	ENSMICG00000044343	CCDC125 (ENSMICG00000006377) #11	ENSMICG00000036504 #14	RAD17 (ENSMICG00000034342) #15	MARVELD2 (ENSMICG00000009724) #16	OCLN (ENSMICG00000012695) #17	ENSMICG00000037919 #18	ENSMICG00000034708 #20	SERF1B (ENSMICG00000046614)	ENSMICG00000042850 #22	MCCC2 (ENSMICG00000000849) #24	CARTPT (ENSMICG00000038285) #25	MAP1B (ENSMICG00000038435) #26	MRPS27 (ENSMICG00000004527) #27	PTCD2 (ENSMICG00000004535) #28	ENSMICG00000043984	ZNF366 (ENSMICG00000026789) #29	TNPO1 (ENSMICG00000008468) #31	ENSMICG00000028486	ENSMICG00000035529	ENSMICG00000046999	MYO10 (ENSMICG00000010556)	RETREG1 (ENSMICG00000010548)	ZNF622 (ENSMICG00000010544)	ENSMICG00000047304
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00960000190103	ENSGT00390000017443.u.a #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Coquerels sifaka	MODERN SPECIES	999	PIK3R1 (ENSPCOG00000021158)	SLC30A5 (ENSPCOG00000027703)	CCNB1 (ENSPCOG00000019490)	CENPH (ENSPCOG00000018331) #7	ENSPCOG00000028619	CDK7 (ENSPCOG00000028543) #9	ENSPCOG00000023132	ENSPCOG00000013378	RAD17 (ENSPCOG00000023648) #15	ENSPCOG00000026155	MARVELD2 (ENSPCOG00000024019) #16	OCLN (ENSPCOG00000009568) #17	ENSPCOG00000014054 #18	ENSPCOG00000022307 #20	ENSPCOG00000027431	ENSPCOG00000022982 #22	MCCC2 (ENSPCOG00000025580) #24	CARTPT (ENSPCOG00000022545) #25	ENSPCOG00000014063	MAP1B (ENSPCOG00000020907) #26	MRPS27 (ENSPCOG00000028430) #27	ENSPCOG00000018429 #28	ZNF366 (ENSPCOG00000018335) #29	TNPO1 (ENSPCOG00000004254) #31	FCHO2 (ENSPCOG00000019242) #33	ENSPCOG00000022901	TMEM171 (ENSPCOG00000025688) #34	TMEM174 (ENSPCOG00000020420) #35	FOXD1 (ENSPCOG00000012192) #37	ANKRA2 (ENSPCOG00000018380)	ARHGEF28 (ENSPCOG00000016965)
Greater bamboo lemur	MODERN SPECIES	328			SLC30A5 (ENSPSMG00000020317)	CCNB1 (ENSPSMG00000020304)	ENSPSMG00000020282	ENSPSMG00000020280 #8	CDK7 (ENSPSMG00000020258) #9	CCDC125 (ENSPSMG00000020205) #11	TAF9 (ENSPSMG00000020156) #13	AK6 (ENSPSMG00000020149) #14	RAD17 (ENSPSMG00000020049) #15	MARVELD2 (ENSPSMG00000019892) #16	OCLN (ENSPSMG00000019824) #17	ENSPSMG00000019760 #18	ENSPSMG00000019613	ENSPSMG00000019604 #22	MCCC2 (ENSPSMG00000019583) #24	CARTPT (ENSPSMG00000019542) #25	MAP1B (ENSPSMG00000019535) #26	ENSPSMG00000019529	MRPS27 (ENSPSMG00000019494) #27	PTCD2 (ENSPSMG00000019409) #28	ZNF366 (ENSPSMG00000019394) #29	ENSPSMG00000019392	TNPO1 (ENSPSMG00000019130) #31	FCHO2 (ENSPSMG00000018928) #33	ENSPSMG00000018838	ENSPSMG00000018833	TMEM171 (ENSPSMG00000018827) #34	TMEM174 (ENSPSMG00000018820) #35	FOXD1 (ENSPSMG00000018815) #37
Bushbaby	MODERN SPECIES	132	SREK1 (ENSOGAG00000016463)	MAST4 (ENSOGAG00000026593)	CD180 (ENSOGAG00000026566)	PIK3R1 (ENSOGAG00000014930)	SLC30A5 (ENSOGAG00000002155)	ENSOGAG00000002156	CENPH (ENSOGAG00000002157) #7	MRPS36 (ENSOGAG00000024260) #8	CDK7 (ENSOGAG00000010748) #9	AK6 (ENSOGAG00000027736) #14	RAD17 (ENSOGAG00000025295) #15	MARVELD2 (ENSOGAG00000006498) #16	OCLN (ENSOGAG00000013672) #17	ENSOGAG00000026197	ENSOGAG00000031414 #20	BDP1 (ENSOGAG00000009010) #22	MCCC2 (ENSOGAG00000009017) #24	CARTPT (ENSOGAG00000009020) #25	MAP1B (ENSOGAG00000032106) #26	MRPS27 (ENSOGAG00000008385) #27	PTCD2 (ENSOGAG00000008390) #28	ZNF366 (ENSOGAG00000008393) #29	ENSOGAG00000026368	TNPO1 (ENSOGAG00000000808) #31	FCHO2 (ENSOGAG00000014694) #33	TMEM171 (ENSOGAG00000028469) #34	TMEM174 (ENSOGAG00000007454) #35	ENSOGAG00000013918	ANKRA2 (ENSOGAG00000000386)	UTP15 (ENSOGAG00000000388)	ARHGEF28 (ENSOGAG00000003713)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Tree shrew	MODERN SPECIES	2256																ENSTBEG00000008808 #22	ENSTBEG00000002399 #20
Glires	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00390000003122.c.b	ENSGT00940000158176	ENSGT00940000158270	ENSGT00990000203589.b.b	ENSGT00940000157310	ENSGT00940000157603	ENSGT00390000009710	ENSGT00940000159952	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Marmotini	ANCESTRAL SPECIES	23	ENSGT00390000003122.c.b	ENSGT00940000158176	ENSGT00940000158270	ENSGT00990000203589.b.b	ENSGT00940000157310	ENSGT00940000157603	ENSGT00390000009710	ENSGT00940000159952	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Alpin marmot	MODERN SPECIES	48	BHMT (ENSMMMG00000006936)	BHMT2 (ENSMMMG00000006929)	DMGDH (ENSMMMG00000006902)	ARSB (ENSMMMG00000006892)	LHFPL2 (ENSMMMG00000006878)	SCAMP1 (ENSMMMG00000006853)	AP3B1 (ENSMMMG00000003600)	TBCA (ENSMMMG00000003516)	WDR41 (ENSMMMG00000003481)	PDE8B (ENSMMMG00000003165)	ZBED3 (ENSMMMG00000003120)	AGGF1 (ENSMMMG00000003093)	ENSMMMG00000003082	ENSMMMG00000003037 #20	ENSMMMG00000003028	BDP1 (ENSMMMG00000002729) #22	MCCC2 (ENSMMMG00000002669) #24	CARTPT (ENSMMMG00000002641) #25	ENSMMMG00000002624	ENSMMMG00000002602	MAP1B (ENSMMMG00000002590) #26	MRPS27 (ENSMMMG00000002576) #27	PTCD2 (ENSMMMG00000002539) #28	ZNF366 (ENSMMMG00000002522) #29	ENSMMMG00000002514	TNPO1 (ENSMMMG00000002439) #31	FCHO2 (ENSMMMG00000002365) #33	TMEM171 (ENSMMMG00000002351) #34	TMEM174 (ENSMMMG00000002346) #35	ENSMMMG00000002304	ANKRA2 (ENSMMMG00000002249)
Marmotini_b	ANCESTRAL SPECIES	92	ENSGT00390000003122.c.b	ENSGT00940000158176	ENSGT00940000158270	ENSGT00990000203589.b.b	ENSGT00940000157310	ENSGT00940000157603	ENSGT00390000009710	ENSGT00940000159952	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Arctic ground squirrel	MODERN SPECIES	118	DMGDH (ENSUPAG00010013523)	ARSB (ENSUPAG00010013552)	LHFPL2 (ENSUPAG00010013572)	SCAMP1 (ENSUPAG00010013586)	AP3B1 (ENSUPAG00010013612)	TBCA (ENSUPAG00010013662)	OTP (ENSUPAG00010013666)	WDR41 (ENSUPAG00010013668)	PDE8B (ENSUPAG00010013724)	ZBED3 (ENSUPAG00010014432)	AGGF1 (ENSUPAG00010014439)	ENSUPAG00010014488	ENSUPAG00010014496	ENSUPAG00010014578 #20	ENSUPAG00010014599	BDP1 (ENSUPAG00010014613) #22	MCCC2 (ENSUPAG00010014643) #24	CARTPT (ENSUPAG00010014708) #25	MAP1B (ENSUPAG00010014748) #26	MRPS27 (ENSUPAG00010014772) #27	PTCD2 (ENSUPAG00010014797) #28	ZNF366 (ENSUPAG00010014827) #29	ENSUPAG00010014831	TNPO1 (ENSUPAG00010014835) #31	FCHO2 (ENSUPAG00010014916) #33	TMEM171 (ENSUPAG00010015000) #34	TMEM174 (ENSUPAG00010015016) #35	FOXD1 (ENSUPAG00010015028) #37	ENSUPAG00010015040	ANKRA2 (ENSUPAG00010015076)	UTP15 (ENSUPAG00010015100)
Squirrel	MODERN SPECIES	149	BHMT2 (ENSSTOG00000005871)	DMGDH (ENSSTOG00000005837)	ARSB (ENSSTOG00000005818)	LHFPL2 (ENSSTOG00000004457)	SCAMP1 (ENSSTOG00000023531)	AP3B1 (ENSSTOG00000014099)	TBCA (ENSSTOG00000009840)	OTP (ENSSTOG00000007544)	WDR41 (ENSSTOG00000028633)	PDE8B (ENSSTOG00000001468)	ZBED3 (ENSSTOG00000003989)	AGGF1 (ENSSTOG00000021590)	ENSSTOG00000023234	ENSSTOG00000012288 #20	ENSSTOG00000028701	ENSSTOG00000033438 #22	MCCC2 (ENSSTOG00000009830) #24	CARTPT (ENSSTOG00000009852) #25	MAP1B (ENSSTOG00000002245) #26	MRPS27 (ENSSTOG00000006565) #27	PTCD2 (ENSSTOG00000006596) #28	ZNF366 (ENSSTOG00000029102) #29	ENSSTOG00000024390	ENSSTOG00000021784 #31	FCHO2 (ENSSTOG00000009856) #33	TMEM171 (ENSSTOG00000025296) #34	TMEM174 (ENSSTOG00000009425) #35	BTF3 (ENSSTOG00000008953)	ANKRA2 (ENSSTOG00000008967)	UTP15 (ENSSTOG00000027733)	ARHGEF28 (ENSSTOG00000009005)
Eurasian red squirrel	MODERN SPECIES	15	ARSB (ENSSVLG00005013953)	LHFPL2 (ENSSVLG00005014202)	SCAMP1 (ENSSVLG00005014260)	AP3B1 (ENSSVLG00005014385)	TBCA (ENSSVLG00005014739)	OTP (ENSSVLG00005014921)	WDR41 (ENSSVLG00005014989)	PDE8B (ENSSVLG00005004357)	ENSSVLG00005004554	ENSSVLG00005004578	ENSSVLG00005004600	AGGF1 (ENSSVLG00005004621)	NAIP (ENSSVLG00005004669) #19	ENSSVLG00005004790 #20	ENSSVLG00005004899	ENSSVLG00005004921 #22	MCCC2 (ENSSVLG00005004953) #24	ENSSVLG00005004973	CARTPT (ENSSVLG00005004989) #25	MAP1B (ENSSVLG00005005010) #26	MRPS27 (ENSSVLG00005005039) #27	PTCD2 (ENSSVLG00005005109) #28	ZNF366 (ENSSVLG00005005191) #29	ENSSVLG00005005210	ENSSVLG00005005227	TNPO1 (ENSSVLG00005005275) #31	FCHO2 (ENSSVLG00005005358) #33	TMEM171 (ENSSVLG00005005613) #34	TMEM174 (ENSSVLG00005005661) #35	FOXD1 (ENSSVLG00005005687) #37	ENSSVLG00005005717
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.bb.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246.a #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389.h #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Hystricomorpha_a	ANCESTRAL SPECIES	29	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.cb #8	ENSGT00390000017443.bb.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246.a #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29
Hystricomorpha_b	ANCESTRAL SPECIES	68	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.cb #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246.a #27	ENSGT00390000009329.b #28
Long-tailed chinchilla	MODERN SPECIES	282						CCDC125 (ENSCLAG00000000248) #11	AK6 (ENSCLAG00000000359) #14	TAF9 (ENSCLAG00000000556) #13	RAD17 (ENSCLAG00000000608) #15	MARVELD2 (ENSCLAG00000000702) #16	ENSCLAG00000000804 #17	ENSCLAG00000000071 #18	ENSCLAG00000000091	ENSCLAG00000000284 #20	ENSCLAG00000000061	ENSCLAG00000000089 #22	MCCC2 (ENSCLAG00000000127) #24	CARTPT (ENSCLAG00000000176) #25	MAP1B (ENSCLAG00000000864) #26	MRPS27 (ENSCLAG00000000933) #27	PTCD2 (ENSCLAG00000000072) #28	ZNF366 (ENSCLAG00000000104) #29
Guinea pig	MODERN SPECIES	180													ENSCPOG00000030515 #18	ENSCPOG00000012328 #20	ENSCPOG00000034757	ENSCPOG00000030512 #22	MCCC2 (ENSCPOG00000005876) #24	CARTPT (ENSCPOG00000021953) #25	MAP1B (ENSCPOG00000006207) #26	MRPS27 (ENSCPOG00000040481) #27	PTCD2 (ENSCPOG00000040168) #28	ZNF366 (ENSCPOG00000007542) #29
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000049946	ENSHGLG00000045518 #9	ENSHGLG00000001474	ENSHGLG00000050747	ENSHGLG00000020852 #13	ENSHGLG00000000509 #11	ENSHGLG00000000374 #15	MARVELD2 (ENSHGLG00000000537) #16	OCLN (ENSHGLG00000003299) #17	ENSHGLG00000035225 #18	ENSHGLG00000041452	ENSHGLG00000002246	SMN1 (ENSHGLG00000001018) #20	ENSHGLG00000034694	ENSHGLG00000046957	ENSHGLG00000001096 #22	ENSHGLG00000042163	ENSHGLG00000050029	ENSHGLG00000004896 #24	CARTPT (ENSHGLG00000042018) #25	ENSHGLG00000036045	ENSHGLG00000016467	ENSHGLG00000020102	ENSHGLG00000036709 #26	ENSHGLG00000000988 #26	ENSHGLG00000001577 #27	ENSHGLG00000039204 #27	ENSHGLG00000001234 #28	ZNF366 (ENSHGLG00000001829) #29	ENSHGLG00000020358	ENSHGLG00000047219
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369.d	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369.d	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369.d	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001021244	Slc30a5 (ENSCGRG00001014056)	CCNB1 (ENSCGRG00001003079)	Cenph (ENSCGRG00001019102) #7	Mrps36 (ENSCGRG00001017786) #8	Cdk7 (ENSCGRG00001005183) #9	Ccdc125 (ENSCGRG00001017892) #11	ENSCGRG00001016427 #14	Rad17 (ENSCGRG00001015180) #15	Marveld2 (ENSCGRG00001022913) #16	Ocln (ENSCGRG00001021920) #17	Gtf2h2 (ENSCGRG00001020894) #18	ENSCGRG00001018625	ENSCGRG00001017959 #20	Serf1 (ENSCGRG00001024566)	Bdp1 (ENSCGRG00001024257) #22	Mccc2 (ENSCGRG00001023696) #24	Cartpt (ENSCGRG00001022845) #25	Map1b (ENSCGRG00001016635) #26	Mrps27 (ENSCGRG00001016241) #27	Ptcd2 (ENSCGRG00001015289) #28	Zfp366 (ENSCGRG00001006020) #29	ENSCGRG00001003516	H2bl1 (ENSCGRG00001007283)	Tnpo1 (ENSCGRG00001016580) #31	Fcho2 (ENSCGRG00001013782) #33	Tmem171 (ENSCGRG00001016096) #34	Tmem174 (ENSCGRG00001011496) #35	Foxd1 (ENSCGRG00001010743) #37	Btf3 (ENSCGRG00001009745)	ENSCGRG00001008466
Golden Hamster	MODERN SPECIES	620	Slc30a5 (ENSMAUG00000010382)	ENSMAUG00000001644	Cenph (ENSMAUG00000018226) #7	Cdk7 (ENSMAUG00000014063) #9	ENSMAUG00000021737 #11	ENSMAUG00000002440 #14	Taf9 (ENSMAUG00000010824) #13	Rad17 (ENSMAUG00000001790) #15	ENSMAUG00000008819 #16	Ocln (ENSMAUG00000010201) #17	ENSMAUG00000010373 #18	ENSMAUG00000013227	ENSMAUG00000003476	Smn1 (ENSMAUG00000010262) #20	Serf1 (ENSMAUG00000012873)	ENSMAUG00000018998 #22	Mccc2 (ENSMAUG00000014376) #24	Cartpt (ENSMAUG00000002719) #25	ENSMAUG00000013521 #26	ENSMAUG00000008678 #26	Mrps27 (ENSMAUG00000005620) #27	Ptcd2 (ENSMAUG00000020253) #28	Zfp366 (ENSMAUG00000010701) #29	Tnpo1 (ENSMAUG00000020550) #31	Fcho2 (ENSMAUG00000012033) #33	Tmem171 (ENSMAUG00000003047) #34	Tmem174 (ENSMAUG00000020261) #35	ENSMAUG00000004345	ENSMAUG00000019518	Ankra2 (ENSMAUG00000011981)	Utp15 (ENSMAUG00000018838)
Cricetidae_B	ANCESTRAL SPECIES	40													ENSGT00940000163369.d	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00390000008557	ENSGT00940000157156
Prairie vole	MODERN SPECIES	6											ENSMOCG00000020036	ENSMOCG00000019068	ENSMOCG00000009977	Smn1 (ENSMOCG00000017833) #20	Serf1 (ENSMOCG00000021413)	ENSMOCG00000000801 #22	Mccc2 (ENSMOCG00000005313) #24	Cartpt (ENSMOCG00000010231) #25	ENSMOCG00000013165 #26	Mrps27 (ENSMOCG00000014839) #27	Ptcd2 (ENSMOCG00000019985) #28	Zfp366 (ENSMOCG00000020994) #29	ENSMOCG00000020264	Tnpo1 (ENSMOCG00000009301) #31	Fcho2 (ENSMOCG00000018919) #33	Tmem171 (ENSMOCG00000004565) #34	Tmem174 (ENSMOCG00000013056) #35	Foxd1 (ENSMOCG00000005673) #37	Btf3 (ENSMOCG00000011394)	ENSMOCG00000012385	Ankra2 (ENSMOCG00000014365)
Northern American deer mouse	MODERN SPECIES	6	Mast4 (ENSPEMG00000023435)	ENSPEMG00000005322	Srek1 (ENSPEMG00000024051)	Erbin (ENSPEMG00000018864)	Nln (ENSPEMG00000022137)	Sgtb (ENSPEMG00000026308)	Trappc13 (ENSPEMG00000016809)	Trim23 (ENSPEMG00000021470)	Ppwd1 (ENSPEMG00000018778)	ENSPEMG00000021531	ENSPEMG00000022024	ENSPEMG00000029918	ENSPEMG00000028058	ENSPEMG00000021390	ENSPEMG00000024440	ENSPEMG00000014952 #22	Mccc2 (ENSPEMG00000023267) #24	Cartpt (ENSPEMG00000024448) #25	Map1b (ENSPEMG00000012490) #26	Mrps27 (ENSPEMG00000023724) #27	Ptcd2 (ENSPEMG00000000884) #28	Zfp366 (ENSPEMG00000016769) #29	H2bl1 (ENSPEMG00000028641)	Tnpo1 (ENSPEMG00000007444) #31	Fcho2 (ENSPEMG00000013363) #33	Tmem171 (ENSPEMG00000007432) #34	Tmem174 (ENSPEMG00000009958) #35	Btf3 (ENSPEMG00000001070)	ENSPEMG00000015367	ENSPEMG00000018029	Utp15 (ENSPEMG00000012771)
Murinae	ANCESTRAL SPECIES	24	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369.d	ENSGT00940000163369.c.b	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Mus	ANCESTRAL SPECIES	22	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369.c.b	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Mus_A	ANCESTRAL SPECIES	14	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179.g #9	ENSGT00440000039958 #11	ENSGT00390000015930.k #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369.c.a.b.b	ENSGT00940000163369.c.b	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Mus_B	ANCESTRAL SPECIES	13	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.y #8	ENSGT00940000155179.g #9	ENSGT00440000039958 #11	ENSGT00390000015930.k #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Mus_C	ANCESTRAL SPECIES	10	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.y #8	ENSGT00940000155179.g #9	ENSGT00440000039958 #11	ENSGT00390000015930.k #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
spretus	MODERN SPECIES	4	Pik3r1 (MGP_SPRETEiJ_G0019731)	Slc30a5 (MGP_SPRETEiJ_G0019730)	Ccnb1 (MGP_SPRETEiJ_G0019729)	Cenph (MGP_SPRETEiJ_G0019728) #7	Mrps36 (MGP_SPRETEiJ_G0019727) #8	Cdk7 (MGP_SPRETEiJ_G0019726) #9	Ccdc125 (MGP_SPRETEiJ_G0019725) #11	MGP_SPRETEiJ_G0019724 #14	Rad17 (MGP_SPRETEiJ_G0019723) #15	Marveld2 (MGP_SPRETEiJ_G0019722) #16	Ocln (MGP_SPRETEiJ_G0019721) #17	Gtf2h2 (MGP_SPRETEiJ_G0019720) #18	MGP_SPRETEiJ_G0019719	Smn1 (MGP_SPRETEiJ_G0019718) #20	Serf1 (MGP_SPRETEiJ_G0019717)	Bdp1 (MGP_SPRETEiJ_G0019716) #22	Mccc2 (MGP_SPRETEiJ_G0019715) #24	Cartpt (MGP_SPRETEiJ_G0019714) #25	Map1b (MGP_SPRETEiJ_G0019713) #26	Mrps27 (MGP_SPRETEiJ_G0019712) #27	Ptcd2 (MGP_SPRETEiJ_G0019711) #28	Zfp366 (MGP_SPRETEiJ_G0019710) #29	H2bl1 (MGP_SPRETEiJ_G0019709)	Tnpo1 (MGP_SPRETEiJ_G0019708) #31	Fcho2 (MGP_SPRETEiJ_G0019707) #33	Tmem171 (MGP_SPRETEiJ_G0019706) #34	Tmem174 (MGP_SPRETEiJ_G0019705) #35	Foxd1 (MGP_SPRETEiJ_G0019704) #37	Btf3 (MGP_SPRETEiJ_G0019703)	MGP_SPRETEiJ_G0019702	Ankra2 (MGP_SPRETEiJ_G0019701)
Steppe mouse	MODERN SPECIES	3425	Cdk7 (ENSMSIG00000002372) #9	Ccdc125 (ENSMSIG00000002197) #11	ENSMSIG00000002090 #14	Rad17 (ENSMSIG00000029022) #15	ENSMSIG00000029020 #16	ENSMSIG00000029012 #16	Ocln (ENSMSIG00000028946) #17	Gtf2h2 (ENSMSIG00000028931) #18	ENSMSIG00000028927	ENSMSIG00000028907	ENSMSIG00000028897	Naip5 (ENSMSIG00000028889)	ENSMSIG00000028869	Smn1 (ENSMSIG00000028863) #20	Serf1 (ENSMSIG00000028854)	Bdp1 (ENSMSIG00000028772) #22	Mccc2 (ENSMSIG00000028762) #24	Cartpt (ENSMSIG00000028754) #25	Map1b (ENSMSIG00000028737) #26	Mrps27 (ENSMSIG00000028728) #27	Ptcd2 (ENSMSIG00000028722) #28	Zfp366 (ENSMSIG00000028719) #29	ENSMSIG00000028710	ENSMSIG00000028708	H2bl1 (ENSMSIG00000028702)	Tnpo1 (ENSMSIG00000028677) #31	Fcho2 (ENSMSIG00000028641) #33	Tmem171 (ENSMSIG00000028636) #34	Tmem174 (ENSMSIG00000028632) #35	ENSMSIG00000028625	ENSMSIG00000028624
Mouse	MODERN SPECIES	4	Mrps36 (ENSMUSG00000061474) #8	Cdk7 (ENSMUSG00000069089) #9	Ccdc125 (ENSMUSG00000048924) #11	Taf9 (ENSMUSG00000052293) #13	Ak6 (ENSMUSG00000078941) #13	Rad17 (ENSMUSG00000021635) #15	Marveld2 (ENSMUSG00000021636) #16	Ocln (ENSMUSG00000021638) #17	Gtf2h2 (ENSMUSG00000021639) #18	Naip1 (ENSMUSG00000021640)	Naip6 (ENSMUSG00000078942)	Naip5 (ENSMUSG00000071203)	Naip2 (ENSMUSG00000078945)	Smn1 (ENSMUSG00000021645) #20	Serf1 (ENSMUSG00000021643)	Bdp1 (ENSMUSG00000049658) #22	Mccc2 (ENSMUSG00000021646) #24	Cartpt (ENSMUSG00000021647) #25	Map1b (ENSMUSG00000052727) #26	Mrps27 (ENSMUSG00000041632) #27	Ptcd2 (ENSMUSG00000021650) #28	Zfp366 (ENSMUSG00000050919) #29	H2bl1 (ENSMUSG00000045022)	Tnpo1 (ENSMUSG00000009470) #31	Fcho2 (ENSMUSG00000041685) #33	Tmem171 (ENSMUSG00000052485) #34	Tmem174 (ENSMUSG00000046082) #35	Foxd1 (ENSMUSG00000078302) #37	Btf3 (ENSMUSG00000021660)	Ankra2 (ENSMUSG00000021661)	Utp15 (ENSMUSG00000041747)
Ryukyu mouse	MODERN SPECIES	4	Ccnb1 (MGP_CAROLIEiJ_G0018850)	Cenph (MGP_CAROLIEiJ_G0018849) #7	Cdk7 (MGP_CAROLIEiJ_G0018847) #9	MGP_CAROLIEiJ_G0018846 #11	MGP_CAROLIEiJ_G0018845 #14	Rad17 (MGP_CAROLIEiJ_G0018844) #15	Marveld2 (MGP_CAROLIEiJ_G0018843) #16	Ocln (MGP_CAROLIEiJ_G0018842) #17	Gtf2h2 (MGP_CAROLIEiJ_G0018841) #18	MGP_CAROLIEiJ_G0018840	MGP_CAROLIEiJ_G0018839	MGP_CAROLIEiJ_G0018838	Naip2 (MGP_CAROLIEiJ_G0018837)	Smn1 (MGP_CAROLIEiJ_G0018836) #20	Serf1 (MGP_CAROLIEiJ_G0018835)	Bdp1 (MGP_CAROLIEiJ_G0018834) #22	Mccc2 (MGP_CAROLIEiJ_G0018833) #24	Cartpt (MGP_CAROLIEiJ_G0018832) #25	Map1b (MGP_CAROLIEiJ_G0018831) #26	Mrps27 (MGP_CAROLIEiJ_G0018830) #27	Ptcd2 (MGP_CAROLIEiJ_G0018829) #28	Zfp366 (MGP_CAROLIEiJ_G0018828) #29	H2bl1 (MGP_CAROLIEiJ_G0018827)	Tnpo1 (MGP_CAROLIEiJ_G0018826) #31	Fcho2 (MGP_CAROLIEiJ_G0018825) #33	Tmem171 (MGP_CAROLIEiJ_G0018824) #34	Tmem174 (MGP_CAROLIEiJ_G0018823) #35	Foxd1 (MGP_CAROLIEiJ_G0018822) #37	Btf3 (MGP_CAROLIEiJ_G0018821)	MGP_CAROLIEiJ_G0018820	Ankra2 (MGP_CAROLIEiJ_G0018819)
Shrew mouse	MODERN SPECIES	2	Pik3r1 (MGP_PahariEiJ_G0015924)	Slc30a5 (MGP_PahariEiJ_G0015923)	Ccnb1 (MGP_PahariEiJ_G0015922)	Cenph (MGP_PahariEiJ_G0015921) #7	Mrps36 (MGP_PahariEiJ_G0015920) #8	Cdk7 (MGP_PahariEiJ_G0015919) #9	MGP_PahariEiJ_G0015918 #11	MGP_PahariEiJ_G0015917 #13	Rad17 (MGP_PahariEiJ_G0015916) #15	Marveld2 (MGP_PahariEiJ_G0015915) #16	Ocln (MGP_PahariEiJ_G0015914) #17	Gtf2h2 (MGP_PahariEiJ_G0015913) #18	MGP_PahariEiJ_G0015912	Smn1 (MGP_PahariEiJ_G0015911) #20	Serf1 (MGP_PahariEiJ_G0015910)	Bdp1 (MGP_PahariEiJ_G0015909) #22	Mccc2 (MGP_PahariEiJ_G0015908) #24	Cartpt (MGP_PahariEiJ_G0015907) #25	Map1b (MGP_PahariEiJ_G0015906) #26	Mrps27 (MGP_PahariEiJ_G0015905) #27	Ptcd2 (MGP_PahariEiJ_G0015904) #28	Zfp366 (MGP_PahariEiJ_G0015903) #29	H2bl1 (MGP_PahariEiJ_G0015902)	Tnpo1 (MGP_PahariEiJ_G0015901) #31	Fcho2 (MGP_PahariEiJ_G0015900) #33	Tmem171 (MGP_PahariEiJ_G0015899) #34	Tmem174 (MGP_PahariEiJ_G0015898) #35	Foxd1 (MGP_PahariEiJ_G0015897) #37	Btf3 (MGP_PahariEiJ_G0015896)	MGP_PahariEiJ_G0015895	Ankra2 (MGP_PahariEiJ_G0015894)
Rat	MODERN SPECIES	11	Ccnb1 (ENSRNOG00000058539)	Cenph (ENSRNOG00000018615) #7	Mrps36 (ENSRNOG00000061213) #8	Cdk7 (ENSRNOG00000018510) #9	Ccdc125 (ENSRNOG00000027410) #11	Ak6 (ENSRNOG00000063018) #14	Taf9 (ENSRNOG00000039848) #13	Rad17 (ENSRNOG00000018353) #15	Ocln (ENSRNOG00000018297) #16	ENSRNOG00000070233	Gtf2h2 (ENSRNOG00000018230) #18	Naip5 (ENSRNOG00000065128)	Naip6 (ENSRNOG00000033693)	Smn1 (ENSRNOG00000018067) #20	Serf1 (ENSRNOG00000017945)	Bdp1 (ENSRNOG00000017864) #22	Mccc2 (ENSRNOG00000017752) #24	Cartpt (ENSRNOG00000017712) #25	Map1b (ENSRNOG00000017428) #26	Mrps27 (ENSRNOG00000017272) #27	Ptcd2 (ENSRNOG00000028403) #28	Zfp366 (ENSRNOG00000017249) #29	LOC684444 (ENSRNOG00000045818)	Tnpo1 (ENSRNOG00000014999) #31	Fcho2 (ENSRNOG00000015334) #33	Tmem171 (ENSRNOG00000015449) #34	Tmem174 (ENSRNOG00000015472) #35	Foxd1 (ENSRNOG00000043332) #37	Btf3 (ENSRNOG00000016912)	Gm21976 (ENSRNOG00000068123)	LOC108348276 (ENSRNOG00000048118)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1029										ENSNGAG00000012977	ENSNGAG00000021584	ENSNGAG00000001300	ENSNGAG00000023640	Smn1 (ENSNGAG00000019833) #20	Serf1 (ENSNGAG00000020895)	ENSNGAG00000021656 #22	Mccc2 (ENSNGAG00000001340) #24	Cartpt (ENSNGAG00000020182) #25	ENSNGAG00000014174	ENSNGAG00000014350	ENSNGAG00000018887 #26	Mrps27 (ENSNGAG00000002484) #27	Ptcd2 (ENSNGAG00000005027) #28	Zfp366 (ENSNGAG00000021361) #29	Tnpo1 (ENSNGAG00000021263) #31	Fcho2 (ENSNGAG00000021186) #33	Tmem171 (ENSNGAG00000023962) #34	Tmem174 (ENSNGAG00000021137) #35	ENSNGAG00000024314	ENSNGAG00000018693	Ankra2 (ENSNGAG00000013698)
Lesser Egyptian jerboa	MODERN SPECIES	45	ENSJJAG00000004712	ENSJJAG00000004175	ENSJJAG00000024070	Dmxl1 (ENSJJAG00000012333)	ENSJJAG00000019050	Cdk7 (ENSJJAG00000022068) #9	Ccdc125 (ENSJJAG00000014719) #11	ENSJJAG00000024099 #14	Rad17 (ENSJJAG00000019042) #15	Marveld2 (ENSJJAG00000000838) #16	Ocln (ENSJJAG00000019972) #17	Gtf2h2 (ENSJJAG00000021793) #18	ENSJJAG00000014853 #20	Serf1 (ENSJJAG00000015414)	ENSJJAG00000016277	ENSJJAG00000013109 #22	Mccc2 (ENSJJAG00000012379) #24	Cartpt (ENSJJAG00000002216) #25	ENSJJAG00000000780 #26	ENSJJAG00000015087 #27	Ptcd2 (ENSJJAG00000024388) #28	Zfp366 (ENSJJAG00000024306) #29	ENSJJAG00000011099	Tnpo1 (ENSJJAG00000010244) #31	ENSJJAG00000003013 #33	ENSJJAG00000014751 #33	ENSJJAG00000006718	Tmem171 (ENSJJAG00000018818) #34	Tmem174 (ENSJJAG00000015429) #35	ENSJJAG00000014230	Btf3 (ENSJJAG00000023592)
Lagomorpha	ANCESTRAL SPECIES	139														ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00910000148663	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228
Rabbit	MODERN SPECIES	453														ENSOCUG00000017097 #20	ENSOCUG00000025836	ENSOCUG00000011167 #22	MCCC2 (ENSOCUG00000009687) #24	ENSOCUG00000034680	ENSOCUG00000013898 #25	ENSOCUG00000001672	ENSOCUG00000033305	ENSOCUG00000031600 #26	ENSOCUG00000007948 #26	ENSOCUG00000039485	MRPS27 (ENSOCUG00000007961) #27	ZNF366 (ENSOCUG00000004571) #29	ENSOCUG00000022045	TNPO1 (ENSOCUG00000013318) #31	FCHO2 (ENSOCUG00000003283) #33	TMEM171 (ENSOCUG00000002668) #34	TMEM174 (ENSOCUG00000012170) #35
Pika	MODERN SPECIES	1128																ENSOPRG00000012918 #22
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00390000009329.a.a ##28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000012762 #22
Hedgehog	MODERN SPECIES	4254																ENSEEUG00000003406 #22
Common shrew	MODERN SPECIES	2131																ENSSARG00000013383 #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Suina	ANCESTRAL SPECIES	25	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A.u #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a	ENSGT00940000154979	ENSGT00390000005989.a
Pig	MODERN SPECIES	7	SLC30A5 (ENSSSCG00000022430)	CCNB1 (ENSSSCG00000029326)	CENPH (ENSSSCG00000027147) #7	MRPS36 (ENSSSCG00000037463) #8	CDK7 (ENSSSCG00000016961) #9	CCDC125 (ENSSSCG00000016963) #11	AK6 (ENSSSCG00000037053) #14	TAF9 (ENSSSCG00000038615) #13	RAD17 (ENSSSCG00000016960) #15	MARVELD2 (ENSSSCG00000016959) #16	OCLN (ENSSSCG00000021514) #17	ENSSSCG00000028786 #18	ENSSSCG00000062377 #19	ENSSSCG00000016970 #20	ENSSSCG00000016969	BDP1 (ENSSSCG00000016968) #22	MCCC2 (ENSSSCG00000016971) #24	CARTPT (ENSSSCG00000016972) #25	MAP1B (ENSSSCG00000016974) #26	MRPS27 (ENSSSCG00000023818) #27	ENSSSCG00000046085	PTCD2 (ENSSSCG00000016975) #28	ZNF366 (ENSSSCG00000016976) #29	ENSSSCG00000016977	TNPO1 (ENSSSCG00000027293) #31	DRD1 (ENSSSCG00000029037)	ENSSSCG00000034025	MSX2 (ENSSSCG00000034500)	NSG2 (ENSSSCG00000016979)	C5orf47 (ENSSSCG00000035512)	CPEB4 (ENSSSCG00000016981)
Chacoan peccary	MODERN SPECIES	98	CD180 (ENSCWAG00000002482)	PIK3R1 (ENSCWAG00000002387)	SLC30A5 (ENSCWAG00000002351)	CCNB1 (ENSCWAG00000002286)	CENPH (ENSCWAG00000002225) #7	ENSCWAG00000002195 #8	CDK7 (ENSCWAG00000002159) #9	CCDC125 (ENSCWAG00000002094) #11	AK6 (ENSCWAG00000002044) #14	RAD17 (ENSCWAG00000001906) #15	MARVELD2 (ENSCWAG00000001847) #16	OCLN (ENSCWAG00000001807) #17	ENSCWAG00000001751 #18	ENSCWAG00000001719 #20	ENSCWAG00000001700	ENSCWAG00000001684 #22	MCCC2 (ENSCWAG00000001643) #24	CARTPT (ENSCWAG00000001624) #25	ENSCWAG00000001611	MAP1B (ENSCWAG00000001564) #26	MRPS27 (ENSCWAG00000001535) #27	PTCD2 (ENSCWAG00000001468) #28	ZNF366 (ENSCWAG00000001446) #29	ENSCWAG00000001435	TNPO1 (ENSCWAG00000001388) #31	DRD1 (ENSCWAG00000001360)	ENSCWAG00000001349	ENSCWAG00000001335	SLC36A1 (ENSCWAG00000001249)	FAT2 (ENSCWAG00000001190)	SPARC (ENSCWAG00000001139)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000155754	ENSGT00940000154586.h	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.o #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000155754	ENSGT00940000154586.h	ENSGT00390000009578 #7	ENSGT00390000017443.n #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.o #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000155754	ENSGT00940000154586.h	ENSGT00390000009578 #7	ENSGT00390000017443.n #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.o #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000154586.h	ENSGT00390000009578 #7	ENSGT00390000017443.m.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.bb #14	ENSGT00940000155097 #13	ENSGT00390000015930.cb #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.o #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831.l
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000155328.bb.a	ENSGT00940000155754	ENSGT00940000154586.h	ENSGT00390000009578 #7	ENSGT00390000017443.m.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.cb #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT00940000155389.o #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831.l
Narwhal	MODERN SPECIES	298	ENSMMNG00015004596	SLC30A5 (ENSMMNG00015005435)	ENSMMNG00015005463	CENPH (ENSMMNG00015005488) #7	ENSMMNG00015005507 #8	CDK7 (ENSMMNG00015005554) #9	CCDC125 (ENSMMNG00015005603) #11	AK6 (ENSMMNG00015005657) #14	RAD17 (ENSMMNG00015005743) #15	MARVELD2 (ENSMMNG00015005846) #16	OCLN (ENSMMNG00015005875) #17	ENSMMNG00015005913 #18	NAIP (ENSMMNG00015005961) #19	ENSMMNG00015006037 #20	ENSMMNG00015006081	BDP1 (ENSMMNG00015006135) #22	MCCC2 (ENSMMNG00015006230) #24	CARTPT (ENSMMNG00015006266) #25	ENSMMNG00015006279	MAP1B (ENSMMNG00015006299) #26	MRPS27 (ENSMMNG00015006337) #27	PTCD2 (ENSMMNG00015006379) #28	ZNF366 (ENSMMNG00015006413) #29	ENSMMNG00015006462 #31	FCHO2 (ENSMMNG00015006516) #33	TMEM171 (ENSMMNG00015006565) #34	TMEM174 (ENSMMNG00015006578) #35	FOXD1 (ENSMMNG00015006586) #37	ENSMMNG00015006605	ANKRA2 (ENSMMNG00015006632)	UTP15 (ENSMMNG00015006668)
Beluga whale	MODERN SPECIES	71	PIK3R1 (ENSDLEG00000011992)	ENSDLEG00000011968	SLC30A5 (ENSDLEG00000011939)	CCNB1 (ENSDLEG00000011902)	CENPH (ENSDLEG00000011868) #7	ENSDLEG00000011858 #8	CDK7 (ENSDLEG00000011834) #9	CCDC125 (ENSDLEG00000011814) #11	AK6 (ENSDLEG00000011769) #14	RAD17 (ENSDLEG00000011738) #15	MARVELD2 (ENSDLEG00000011703) #16	OCLN (ENSDLEG00000011679) #17	ENSDLEG00000011655 #18	NAIP (ENSDLEG00000011638) #19	ENSDLEG00000011593 #20	BDP1 (ENSDLEG00000010830) #22	MCCC2 (ENSDLEG00000010734) #24	CARTPT (ENSDLEG00000010722) #25	MAP1B (ENSDLEG00000010681) #26	MRPS27 (ENSDLEG00000010646) #27	PTCD2 (ENSDLEG00000010606) #28	ZNF366 (ENSDLEG00000010589) #29	TNPO1 (ENSDLEG00000010212) #31	FCHO2 (ENSDLEG00000010105) #33	TMEM171 (ENSDLEG00000010086) #34	TMEM174 (ENSDLEG00000010071) #35	FOXD1 (ENSDLEG00000010050) #37	BTF3 (ENSDLEG00000010028)	ANKRA2 (ENSDLEG00000009969)	UTP15 (ENSDLEG00000009898)	ARHGEF28 (ENSDLEG00000009420)
Vaquita	MODERN SPECIES	14	SLC30A5 (ENSPSNG00000008835)	ENSPSNG00000008796	CENPH (ENSPSNG00000008757) #7	ENSPSNG00000008713 #8	CDK7 (ENSPSNG00000008636) #9	CCDC125 (ENSPSNG00000008496) #11	TAF9 (ENSPSNG00000008465) #13	ENSPSNG00000008374 #14	RAD17 (ENSPSNG00000008246) #15	MARVELD2 (ENSPSNG00000008132) #16	OCLN (ENSPSNG00000008068) #17	ENSPSNG00000008003 #18	NAIP (ENSPSNG00000007844) #19	ENSPSNG00000007752 #20	ENSPSNG00000007675	ENSPSNG00000007645 #22	MCCC2 (ENSPSNG00000007571) #24	CARTPT (ENSPSNG00000007524) #25	MAP1B (ENSPSNG00000007465) #26	MRPS27 (ENSPSNG00000007388) #27	PTCD2 (ENSPSNG00000007260) #28	ZNF366 (ENSPSNG00000007207) #29	ENSPSNG00000007143 #31	FCHO2 (ENSPSNG00000007054) #33	TMEM171 (ENSPSNG00000007005) #34	TMEM174 (ENSPSNG00000006973) #35	FOXD1 (ENSPSNG00000006952) #37	BTF3 (ENSPSNG00000006904)	ANKRA2 (ENSPSNG00000006865)	UTP15 (ENSPSNG00000006804)	ARHGEF28 (ENSPSNG00000006700)
Dolphin	MODERN SPECIES	874																BDP1 (ENSTTRG00000011415) #22	MCCC2 (ENSTTRG00000011457) #24	CARTPT (ENSTTRG00000011472) #25
Sperm whale	MODERN SPECIES	19	CD180 (ENSPCTG00005014631)	PIK3R1 (ENSPCTG00005014702)	SLC30A5 (ENSPCTG00005000345)	CCNB1 (ENSPCTG00005000382)	CENPH (ENSPCTG00005000417) #7	MRPS36 (ENSPCTG00005000461) #8	CDK7 (ENSPCTG00005000499) #9	CCDC125 (ENSPCTG00005000561) #11	AK6 (ENSPCTG00005000633) #14	RAD17 (ENSPCTG00005000727) #15	OCLN (ENSPCTG00005000828) #17	ENSPCTG00005000863 #18	NAIP (ENSPCTG00005000909) #19	ENSPCTG00005000962 #20	ENSPCTG00005001000	BDP1 (ENSPCTG00005001034) #22	MCCC2 (ENSPCTG00005001076) #24	CARTPT (ENSPCTG00005001125) #25	ENSPCTG00005001141	MAP1B (ENSPCTG00005001156) #26	MRPS27 (ENSPCTG00005001179) #27	PTCD2 (ENSPCTG00005001224) #28	ZNF366 (ENSPCTG00005001288) #29	TNPO1 (ENSPCTG00005001308) #31	FCHO2 (ENSPCTG00005001361) #33	TMEM171 (ENSPCTG00005001394) #34	TMEM174 (ENSPCTG00005001406) #35	FOXD1 (ENSPCTG00005001417) #37	BTF3 (ENSPCTG00005001434)	ANKRA2 (ENSPCTG00005001459)	UTP15 (ENSPCTG00005001482)
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	14	ENSBMSG00010007876	CENPH (ENSBMSG00010007890) #7	MRPS36 (ENSBMSG00010007913) #8	CDK7 (ENSBMSG00010007947) #9	CCDC125 (ENSBMSG00010007976) #11	AK6 (ENSBMSG00010008004) #14	TAF9 (ENSBMSG00010008016) #13	RAD17 (ENSBMSG00010008093) #15	MARVELD2 (ENSBMSG00010008162) #16	OCLN (ENSBMSG00010008177) #17	ENSBMSG00010008204 #18	NAIP (ENSBMSG00010008228) #19	ENSBMSG00010008339 #20	ENSBMSG00010008386	ENSBMSG00010008398	ENSBMSG00010004248 #22	MCCC2 (ENSBMSG00010004252) #24	CARTPT (ENSBMSG00010004259) #25	ENSBMSG00010004267	MAP1B (ENSBMSG00010004274) #26	MRPS27 (ENSBMSG00010004277) #27	PTCD2 (ENSBMSG00010004295) #28	ZNF366 (ENSBMSG00010004343) #29	ENSBMSG00010004357 #31	FCHO2 (ENSBMSG00010004388) #33	TMEM171 (ENSBMSG00010004430) #34	ENSBMSG00010004443	TMEM174 (ENSBMSG00010004452) #35	FOXD1 (ENSBMSG00010004462) #37	ENSBMSG00010004469	ANKRA2 (ENSBMSG00010004475)
Blue whale	MODERN SPECIES	17	ELAVL2 (ENSBMSG00010002512)	ENSBMSG00010002482	IZUMO3 (ENSBMSG00010002457)	TUSC1 (ENSBMSG00010002418)	CAAP1 (ENSBMSG00010002383)	PLAA (ENSBMSG00010002358)	LRRC19 (ENSBMSG00010002326)	IFT74 (ENSBMSG00010002307)	TEK (ENSBMSG00010002226)	ENSBMSG00010002164	MOB3B (ENSBMSG00010002146)	IFNK (ENSBMSG00010002135)	C9orf72 (ENSBMSG00010002120)	LINGO2 (ENSBMSG00010002102)	ENSBMSG00010002080	ENSBMSG00010002070 #22	ACO1 (ENSBMSG00010002056)	RIGI (ENSBMSG00010002006)	TOPORS (ENSBMSG00010001968)	SMIM27 (ENSBMSG00010001953)	NDUFB6 (ENSBMSG00010001941)	TMEM215 (ENSBMSG00010001931)	APTX (ENSBMSG00010001870)	ENSBMSG00010001830	SMU1 (ENSBMSG00010001819)	B4GALT1 (ENSBMSG00010001799)	SPINK4 (ENSBMSG00010001764)	ENSBMSG00010001744	CHMP5 (ENSBMSG00010001727)	NFX1 (ENSBMSG00010001704)	ENSBMSG00010001660
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000155754	ENSGT00940000154586.j	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097 #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.a.d	ENSGT00940000153288.b	ENSGT00940000157156
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000155754	ENSGT00940000154586.j	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097.f #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.a.d	ENSGT00940000157156	ENSGT00390000004228
Bovidae	ANCESTRAL SPECIES	26	ENSGT00940000155754	ENSGT00940000154586.j	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097.f #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.a.d	ENSGT00510000046986.x.a.c	ENSGT00940000157156
Bovinae	ANCESTRAL SPECIES	25	ENSGT00940000155754	ENSGT00940000154586.j.g	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097.f #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559.m #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Bos	ANCESTRAL SPECIES	26	ENSGT00940000155754	ENSGT00940000154586.j.g	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097.f #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559.m #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT01100000267062	ENSGT00940000162930	ENSGT01100000264231.B
Bos_b	ANCESTRAL SPECIES	29	ENSGT00940000155754	ENSGT00940000154586.j.g	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00940000155097.f #13	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559.m #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT01100000267062	ENSGT00940000162930	ENSGT01100000264231.B
Hybrid Bos Indicus	MODERN SPECIES	12	CENPH (ENSBIXG00005015456) #7	ENSBIXG00005007280 #8	ENSBIXG00005002296	ENSBIXG00005007021	CDK7 (ENSBIXG00005015531) #9	CCDC125 (ENSBIXG00005015605) #11	TAF9 (ENSBIXG00005015644) #13	AK6 (ENSBIXG00005015773) #14	RAD17 (ENSBIXG00005002681) #15	MARVELD2 (ENSBIXG00005016799) #16	OCLN (ENSBIXG00005002723) #17	ENSBIXG00005016916 #18	NAIP (ENSBIXG00005002770) #19	ENSBIXG00005017244 #20	ENSBIXG00005017284	ENSBIXG00005007756 #22	MCCC2 (ENSBIXG00005017367) #24	CARTPT (ENSBIXG00005017384) #25	MAP1B (ENSBIXG00005002826) #26	ENSBIXG00005017432	MRPS27 (ENSBIXG00005017535) #27	PTCD2 (ENSBIXG00005017662) #28	ENSBIXG00005002871	ZNF366 (ENSBIXG00005017695) #29	ENSBIXG00005017712	TNPO1 (ENSBIXG00005017817) #31	FCHO2 (ENSBIXG00005017866) #33	TMEM171 (ENSBIXG00005007563) #34	TMEM174 (ENSBIXG00005017904) #35	FOXD1 (ENSBIXG00005017926) #37	ENSBIXG00005002917
Cow	MODERN SPECIES	12	CCNB1 (ENSBTAG00000014239)	CENPH (ENSBTAG00000014246) #7	MRPS36 (ENSBTAG00000011045) #8	CDK7 (ENSBTAG00000011046) #9	CCDC125 (ENSBTAG00000017011) #11	TAF9 (ENSBTAG00000027980) #13	AK6 (ENSBTAG00000046192) #14	RAD17 (ENSBTAG00000002073) #15	MARVELD2 (ENSBTAG00000040001) #16	OCLN (ENSBTAG00000000561) #17	GTF2H2 (ENSBTAG00000027983) #18	ENSBTAG00000051768 #19	NAIP (ENSBTAG00000003326) #19	SMN2 (ENSBTAG00000005743) #20	SERF1A (ENSBTAG00000034360)	BDP1 (ENSBTAG00000000363) #22	MCCC2 (ENSBTAG00000044160) #24	CARTPT (ENSBTAG00000047486) #25	MAP1B (ENSBTAG00000001961) #26	ENSBTAG00000053736	MRPS27 (ENSBTAG00000001962) #27	PTCD2 (ENSBTAG00000014675) #28	ZNF366 (ENSBTAG00000020601) #29	H2BL1 (ENSBTAG00000012775)	TNPO1 (ENSBTAG00000007979) #31	FCHO2 (ENSBTAG00000017545) #33	ENSBTAG00000053703 #33	TMEM171 (ENSBTAG00000008494) #34	TMEM174 (ENSBTAG00000003377) #35	ENSBTAG00000049168	CALM (ENSBTAG00000032705)
Bos_a	ANCESTRAL SPECIES	80		ENSGT00940000155754	ENSGT00940000154586.j.g	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559.m #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT01100000267062	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a	ENSGT00940000153288.a.a.d
Wild yak	MODERN SPECIES	221		SLC30A5 (ENSBMUG00000024203)	ENSBMUG00000024186	CENPH (ENSBMUG00000024173) #7	MRPS36 (ENSBMUG00000024145) #8	CDK7 (ENSBMUG00000024134) #9	CCDC125 (ENSBMUG00000024065) #11	ENSBMUG00000023982 #14	RAD17 (ENSBMUG00000023938) #15	MARVELD2 (ENSBMUG00000023816) #16	OCLN (ENSBMUG00000023739) #17	ENSBMUG00000023705 #18	NAIP (ENSBMUG00000023671) #19	ENSBMUG00000023636 #20	ENSBMUG00000023572	BDP1 (ENSBMUG00000023544) #22	MCCC2 (ENSBMUG00000023519) #24	CARTPT (ENSBMUG00000023499) #25	MAP1B (ENSBMUG00000023490) #26	MRPS27 (ENSBMUG00000023458) #27	PTCD2 (ENSBMUG00000023409) #28	ZNF366 (ENSBMUG00000023386) #29	ENSBMUG00000023384	TNPO1 (ENSBMUG00000023368) #31	FCHO2 (ENSBMUG00000023322) #33	TMEM171 (ENSBMUG00000023278) #34	TMEM174 (ENSBMUG00000023262) #35	ENSBMUG00000023243	ENSBMUG00000023233	ENSBMUG00000023219	ENSBMUG00000023211
American bison	MODERN SPECIES	3243	PIK3R1 (ENSBBBG00000013088)	SLC30A5 (ENSBBBG00000002640)	ENSBBBG00000007212	CENPH (ENSBBBG00000002656) #7	MRPS36 (ENSBBBG00000013169) #8	CDK7 (ENSBBBG00000013204) #9	CCDC125 (ENSBBBG00000013235) #11	AK6 (ENSBBBG00000013254) #14	RAD17 (ENSBBBG00000013520) #15	MARVELD2 (ENSBBBG00000007895) #16	OCLN (ENSBBBG00000013595) #17	ENSBBBG00000002876 #18	NAIP (ENSBBBG00000013711) #19	ENSBBBG00000002962 #20	ENSBBBG00000013845	ENSBBBG00000002986 #22	MCCC2 (ENSBBBG00000003008) #24	CARTPT (ENSBBBG00000013913) #25	MAP1B (ENSBBBG00000013927) #26	MRPS27 (ENSBBBG00000013952) #27	PTCD2 (ENSBBBG00000013984) #28	ZNF366 (ENSBBBG00000003078) #29	ENSBBBG00000003091	TNPO1 (ENSBBBG00000003141) #31	FCHO2 (ENSBBBG00000014125) #33	TMEM171 (ENSBBBG00000003184) #34	TMEM174 (ENSBBBG00000007406) #35	ENSBBBG00000003191	ENSBBBG00000014147	ENSBBBG00000014149	ANKRA2 (ENSBBBG00000003201)
Caprinae	ANCESTRAL SPECIES	24	ENSGT00940000155754	ENSGT00940000154586.j	ENSGT00390000009578 #7	ENSGT00390000017443.k.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097.f #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793.`b.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.a.d.i	ENSGT00510000046986.x.a.c	ENSGT00940000157156
Goat	MODERN SPECIES	12	SLC30A5 (ENSCHIG00000021792)	ENSCHIG00000016273	CENPH (ENSCHIG00000014036) #7	ENSCHIG00000026342 #8	CDK7 (ENSCHIG00000023847) #9	CCDC125 (ENSCHIG00000017643) #11	ENSCHIG00000012429	AK6 (ENSCHIG00000017952) #14	RAD17 (ENSCHIG00000020796) #15	MARVELD2 (ENSCHIG00000016241) #16	OCLN (ENSCHIG00000001852) #17	ENSCHIG00000012368 #18	NAIP (ENSCHIG00000018493) #19	ENSCHIG00000015559 #20	ENSCHIG00000019956	BDP1 (ENSCHIG00000013992) #22	MCCC2 (ENSCHIG00000023129) #24	CARTPT (ENSCHIG00000011305) #25	ENSCHIG00000021953	MAP1B (ENSCHIG00000013737) #26	MRPS27 (ENSCHIG00000024940) #27	PTCD2 (ENSCHIG00000017118) #28	ZNF366 (ENSCHIG00000013013) #29	ENSCHIG00000006722	TNPO1 (ENSCHIG00000023462) #31	FCHO2 (ENSCHIG00000012241) #33	TMEM171 (ENSCHIG00000021608) #34	TMEM174 (ENSCHIG00000015643) #35	FOXD1 (ENSCHIG00000002299) #37	ENSCHIG00000020581	ENSCHIG00000015443
Siberian musk deer	MODERN SPECIES	182							ENSMMSG00000022947 #13	RAD17 (ENSMMSG00000022960) #15	MARVELD2 (ENSMMSG00000023041) #16	ENSMMSG00000023051	OCLN (ENSMMSG00000023057) #17	ENSMMSG00000023069 #18	ENSMMSG00000023093 #19	ENSMMSG00000023130 #20	ENSMMSG00000023205	ENSMMSG00000023211 #22	ENSMMSG00000014640	ENSMMSG00000014652	MCCC2 (ENSMMSG00000014670) #24	CARTPT (ENSMMSG00000014699) #25	ENSMMSG00000014717	MAP1B (ENSMMSG00000014729) #26	MRPS27 (ENSMMSG00000014750) #27	PTCD2 (ENSMMSG00000014786) #28	ZNF366 (ENSMMSG00000014861) #29	ENSMMSG00000014876	TNPO1 (ENSMMSG00000014901) #31	FCHO2 (ENSMMSG00000014984) #33	ENSMMSG00000015028	TMEM171 (ENSMMSG00000015047) #34	TMEM174 (ENSMMSG00000015062) #35
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	17	ENSCHYG00000014662 #28	ENSCHYG00000014603 #29	ENSCHYG00000014542	ENSCHYG00000014393 #31	ENSCHYG00000014271 #33	ENSCHYG00000014162 #33	ENSCHYG00000014122 #34	ENSCHYG00000014096 #35	ENSCHYG00000014053	ENSCHYG00000013979	ENSCHYG00000013919	ENSCHYG00000013828	ENSCHYG00000025197	ENSCHYG00000025106 #19	ENSCHYG00000025039 #20	ENSCHYG00000024923 #22	ENSCHYG00000024830 #24	ENSCHYG00000024806 #25	ENSCHYG00000024772 #26	ENSCHYG00000024636 #27	ENSCHYG00000024467 #28	ENSCHYG00000024425 #29	ENSCHYG00000024406	ENSCHYG00000024209 #31	ENSCHYG00000023785 #33	ENSCHYG00000023735 #34	ENSCHYG00000023715 #35	ENSCHYG00000023700	ENSCHYG00000023638	ENSCHYG00000023591	ENSCHYG00000023480
Yarkand deer	MODERN SPECIES	17	SLC30A5 (ENSCHYG00000020535)	ENSCHYG00000020416	CENPH (ENSCHYG00000020280) #7	ENSCHYG00000020199 #8	ENSCHYG00000019737 #9	ENSCHYG00000019682	CCDC125 (ENSCHYG00000019380) #11	RAD17 (ENSCHYG00000018850) #15	MARVELD2 (ENSCHYG00000018621) #16	ENSCHYG00000018540	ENSCHYG00000018120 #14	OCLN (ENSCHYG00000018020) #17	ENSCHYG00000017216 #19	ENSCHYG00000016989 #20	ENSCHYG00000016939	ENSCHYG00000015636 #22	ENSCHYG00000015181 #24	ENSCHYG00000015102 #25	ENSCHYG00000014962 #26	ENSCHYG00000014846 #27	ENSCHYG00000014662 #28	ENSCHYG00000014603 #29	ENSCHYG00000014542	ENSCHYG00000014393 #31	ENSCHYG00000014271 #33	ENSCHYG00000014162 #33	ENSCHYG00000014122 #34	ENSCHYG00000014096 #35	ENSCHYG00000014053	ENSCHYG00000013979	ENSCHYG00000013919
Camelidae	ANCESTRAL SPECIES	1	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Alpaca	MODERN SPECIES	1997																BDP1 (ENSVPAG00000006830) #22	MCCC2 (ENSVPAG00000006832) #24
Arabian camel	MODERN SPECIES	22	PIK3R1 (ENSCDRG00005004828)	SLC30A5 (ENSCDRG00005004759)	CCNB1 (ENSCDRG00005004712)	CENPH (ENSCDRG00005004690) #7	MRPS36 (ENSCDRG00005004667) #8	CDK7 (ENSCDRG00005004563) #9	CCDC125 (ENSCDRG00005004430) #11	ENSCDRG00005004210 #14	RAD17 (ENSCDRG00005004069) #15	MARVELD2 (ENSCDRG00005003983) #16	OCLN (ENSCDRG00005003911) #17	ENSCDRG00005003810 #18	NAIP (ENSCDRG00005003754) #19	ENSCDRG00005003566 #20	ENSCDRG00005003708	BDP1 (ENSCDRG00005003466) #22	MCCC2 (ENSCDRG00005003395) #24	CARTPT (ENSCDRG00005003367) #25	MAP1B (ENSCDRG00005003351) #26	MRPS27 (ENSCDRG00005003313) #27	PTCD2 (ENSCDRG00005003255) #28	ZNF366 (ENSCDRG00005003227) #29	ENSCDRG00005003212	TNPO1 (ENSCDRG00005003173) #31	FCHO2 (ENSCDRG00005003139) #33	TMEM171 (ENSCDRG00005003113) #34	TMEM174 (ENSCDRG00005003105) #35	ENSCDRG00005003045	ANKRA2 (ENSCDRG00005003023)	UTP15 (ENSCDRG00005002976)	ARHGEF28 (ENSCDRG00005002784)
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163369	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Greater horseshoe bat	MODERN SPECIES	25	ENSRFEG00010019873	ENSRFEG00010019894	CCNB1 (ENSRFEG00010019903)	CENPH (ENSRFEG00010019969) #7	CDK7 (ENSRFEG00010020086) #9	CCDC125 (ENSRFEG00010020154) #11	AK6 (ENSRFEG00010020246) #14	RAD17 (ENSRFEG00010020333) #15	MARVELD2 (ENSRFEG00010020575) #16	ENSRFEG00010020616	OCLN (ENSRFEG00010020630) #17	ENSRFEG00010020675 #18	ENSRFEG00010020726	ENSRFEG00010020777 #20	ENSRFEG00010020824	BDP1 (ENSRFEG00010020860) #22	MCCC2 (ENSRFEG00010020881) #24	CARTPT (ENSRFEG00010020906) #25	ENSRFEG00010020916	MAP1B (ENSRFEG00010020929) #26	MRPS27 (ENSRFEG00010020956) #27	PTCD2 (ENSRFEG00010020991) #28	ZNF366 (ENSRFEG00010021033) #29	ENSRFEG00010021056	TNPO1 (ENSRFEG00010021068) #31	FCHO2 (ENSRFEG00010021117) #33	TMEM171 (ENSRFEG00010021133) #34	TMEM174 (ENSRFEG00010021149) #35	FOXD1 (ENSRFEG00010010316) #37	ENSRFEG00010010343	ANKRA2 (ENSRFEG00010010517)
Microbat	MODERN SPECIES	937	MAST4 (ENSMLUG00000015877)	CD180 (ENSMLUG00000015900)	PIK3R1 (ENSMLUG00000015409)	SLC30A5 (ENSMLUG00000014955)	CCNB1 (ENSMLUG00000012856)	CENPH (ENSMLUG00000012863) #7	CDK7 (ENSMLUG00000002960) #9	CCDC125 (ENSMLUG00000002966) #11	AK6 (ENSMLUG00000028932) #14	RAD17 (ENSMLUG00000001882) #15	MARVELD2 (ENSMLUG00000003819) #16	OCLN (ENSMLUG00000007969) #17	ENSMLUG00000007994 #18	ENSMLUG00000023908	ENSMLUG00000010603 #20	BDP1 (ENSMLUG00000001252) #22	ENSMLUG00000024040	MCCC2 (ENSMLUG00000002792) #24	CARTPT (ENSMLUG00000002808) #25	ENSMLUG00000023473	MAP1B (ENSMLUG00000005408) #26	MRPS27 (ENSMLUG00000007355) #27	PTCD2 (ENSMLUG00000007374) #28	ZNF366 (ENSMLUG00000007392) #29	ENSMLUG00000023203	TNPO1 (ENSMLUG00000016317) #31	FCHO2 (ENSMLUG00000017366) #33	ENSMLUG00000029980	TMEM171 (ENSMLUG00000006615) #34	TMEM174 (ENSMLUG00000015724) #35	ENSMLUG00000006789
Megabat	MODERN SPECIES	1154																BDP1 (ENSPVAG00000010924) #22	MCCC2 (ENSPVAG00000010926) #24	CARTPT (ENSPVAG00000010928) #25	MAP1B (ENSPVAG00000010930) #26	MRPS27 (ENSPVAG00000010933) #27	PTCD2 (ENSPVAG00000010935) #28	ZNF366 (ENSPVAG00000010937) #29
Equus	ANCESTRAL SPECIES	6	ENSGT01100000263486.a.b.a.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.c.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.c.b	ENSGT00940000158134.A	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b	ENSGT01060000248581.C.a.b.a.a	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.a	ENSGT00940000157156	ENSGT00390000004228
Horse	MODERN SPECIES	5	OR2C3F (ENSECAG00000031551)	OR2C3 (ENSECAG00000036826)	OR2C3D (ENSECAG00000028047)	GCSAML (ENSECAG00000015365)	OR9E4 (ENSECAG00000015329)	ENSECAG00000044823	TAF9 (ENSECAG00000056130) #13	AK6 (ENSECAG00000015185) #14	RAD17 (ENSECAG00000011029) #15	MARVELD2 (ENSECAG00000010505) #16	OCLN (ENSECAG00000009118) #17	ENSECAG00000007814 #18	NAIP (ENSECAG00000001141) #19	ENSECAG00000015215 #20	ENSECAG00000039271	BDP1 (ENSECAG00000011402) #22	MCCC2 (ENSECAG00000010213) #24	CARTPT (ENSECAG00000009850) #25	MAP1B (ENSECAG00000008777) #26	MRPS27 (ENSECAG00000008099) #27	PTCD2 (ENSECAG00000007022) #28	ZNF366 (ENSECAG00000006723) #29	H2BL1 (ENSECAG00000037585)	TNPO1 (ENSECAG00000024424) #31	FCHO2 (ENSECAG00000023625) #33	TMEM171 (ENSECAG00000023608) #34	TMEM174 (ENSECAG00000023603) #35	BTF3 (ENSECAG00000021629)	ANKRA2 (ENSECAG00000021071)	UTP15 (ENSECAG00000019428)	ENSECAG00000059104
Donkey	MODERN SPECIES	29	ENSEASG00005035559	ENSEASG00005017981	ENSEASG00005017983	ENSEASG00005017985	ENSEASG00005017987	ENSEASG00005017988	TAF9 (ENSEASG00005035139) #13	ENSEASG00005027252 #14	RAD17 (ENSEASG00005017990) #15	MARVELD2 (ENSEASG00005017993) #16	OCLN (ENSEASG00005017994) #17	ENSEASG00005017997 #18	ENSEASG00005017998 #19	ENSEASG00005018000 #20	ENSEASG00005018002	ENSEASG00005018008 #22	MCCC2 (ENSEASG00005018018) #24	CARTPT (ENSEASG00005037863) #25	MAP1B (ENSEASG00005018029) #26	MRPS27 (ENSEASG00005018033) #27	ENSEASG00005018038 #28	ZNF366 (ENSEASG00005018044) #29	ENSEASG00005025091	TNPO1 (ENSEASG00005018055) #31	FCHO2 (ENSEASG00005025623) #33	TMEM171 (ENSEASG00005018090) #34	TMEM174 (ENSEASG00005018095) #35	ENSEASG00005034410	FOXD1 (ENSEASG00005037265) #37	ENSEASG00005018101	ENSEASG00005018103
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228
Ursidae	ANCESTRAL SPECIES	16	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793.y.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Ursus	ANCESTRAL SPECIES	3	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179.k #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793.y.a	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000154268.e.a.kb
Polar bear	MODERN SPECIES	173	CD180 (ENSUMAG00000008075)	PIK3R1 (ENSUMAG00000008044)	SLC30A5 (ENSUMAG00000008034)	CCNB1 (ENSUMAG00000007958)	CENPH (ENSUMAG00000007939) #7	MRPS36 (ENSUMAG00000007932) #8	CDK7 (ENSUMAG00000007920) #9	CCDC125 (ENSUMAG00000007913) #11	AK6 (ENSUMAG00000007907) #14	RAD17 (ENSUMAG00000007897) #15	MARVELD2 (ENSUMAG00000007892) #16	OCLN (ENSUMAG00000007874) #17	ENSUMAG00000007859 #18	ENSUMAG00000007842 #20	ENSUMAG00000007834	BDP1 (ENSUMAG00000007786) #22	MCCC2 (ENSUMAG00000007759) #24	CARTPT (ENSUMAG00000007727) #25	MAP1B (ENSUMAG00000007688) #26	MRPS27 (ENSUMAG00000007672) #27	PTCD2 (ENSUMAG00000007666) #28	ZNF366 (ENSUMAG00000007660) #29	ENSUMAG00000007646	TNPO1 (ENSUMAG00000007635) #31	FCHO2 (ENSUMAG00000007628) #33	ENSUMAG00000007619	TMEM171 (ENSUMAG00000007617) #34	TMEM174 (ENSUMAG00000007599) #35	ENSUMAG00000007580	ANKRA2 (ENSUMAG00000007571)	UTP15 (ENSUMAG00000007568)
American black bear	MODERN SPECIES	5467														ENSUAMG00000024947 #20	ENSUAMG00000024945	BDP1 (ENSUAMG00000024939) #22	ENSUAMG00000024935 #24
Giant Panda	MODERN SPECIES	13	ENSAMEG00000023533	PIK3R1 (ENSAMEG00000003039)	SLC30A5 (ENSAMEG00000003073)	CCNB1 (ENSAMEG00000003117)	CENPH (ENSAMEG00000003155) #7	MRPS36 (ENSAMEG00000003161) #8	CDK7 (ENSAMEG00000003163) #9	CCDC125 (ENSAMEG00000003209) #11	AK6 (ENSAMEG00000003223) #14	RAD17 (ENSAMEG00000003234) #15	MARVELD2 (ENSAMEG00000003264) #16	OCLN (ENSAMEG00000003282) #17	ENSAMEG00000003288 #18	ENSAMEG00000003316 #20	ENSAMEG00000024028	ENSAMEG00000003347 #22	ENSAMEG00000003386 #24	CARTPT (ENSAMEG00000028840) #25	MAP1B (ENSAMEG00000007235) #26	MRPS27 (ENSAMEG00000007215) #27	PTCD2 (ENSAMEG00000007194) #28	ZNF366 (ENSAMEG00000007185) #29	ENSAMEG00000019480	TNPO1 (ENSAMEG00000007147) #31	FCHO2 (ENSAMEG00000007073) #33	TMEM171 (ENSAMEG00000007062) #34	TMEM174 (ENSAMEG00000007057) #35	ENSAMEG00000030457	ENSAMEG00000011563	ANKRA2 (ENSAMEG00000011538)	UTP15 (ENSAMEG00000011501)
Mustelinae	ANCESTRAL SPECIES	17	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586.k.b	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395.d #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33
American mink	MODERN SPECIES	202	PIK3R1 (ENSNVIG00000015616)	SLC30A5 (ENSNVIG00000015566)	ENSNVIG00000015540	CENPH (ENSNVIG00000015510) #7	MRPS36 (ENSNVIG00000015486) #8	CDK7 (ENSNVIG00000015358) #9	CCDC125 (ENSNVIG00000015314) #11	ENSNVIG00000015254 #14	RAD17 (ENSNVIG00000015184) #15	MARVELD2 (ENSNVIG00000015130) #16	OCLN (ENSNVIG00000015045) #17	ENSNVIG00000014929 #18	ENSNVIG00000014628 #20	ENSNVIG00000014604	ENSNVIG00000014594	BDP1 (ENSNVIG00000014516) #22	MCCC2 (ENSNVIG00000014463) #24	CART (ENSNVIG00000014455) #25	MAP1B (ENSNVIG00000014419) #26	MRPS27 (ENSNVIG00000014366) #27	PTCD2 (ENSNVIG00000014328) #28	ZNF366 (ENSNVIG00000014315) #29	ENSNVIG00000014296	TNPO1 (ENSNVIG00000014098) #31
Ferret	MODERN SPECIES	269	ENSMPUG00000014723	PIK3R1 (ENSMPUG00000014719)	ENSMPUG00000014716	SLC30A5 (ENSMPUG00000014669)	ENSMPUG00000014648	CENPH (ENSMPUG00000014646) #7	ENSMPUG00000014644 #8	CDK7 (ENSMPUG00000014611) #9	CCDC125 (ENSMPUG00000014598) #11	AK6 (ENSMPUG00000014588) #14	RAD17 (ENSMPUG00000014524) #15	MARVELD2 (ENSMPUG00000014520) #16	OCLN (ENSMPUG00000014516) #17	ENSMPUG00000014474 #18	ENSMPUG00000014470 #20	BDP1 (ENSMPUG00000014424) #22	MCCC2 (ENSMPUG00000014417) #24	CARTPT (ENSMPUG00000014410) #25	MAP1B (ENSMPUG00000014406) #26	MRPS27 (ENSMPUG00000014403) #27	PTCD2 (ENSMPUG00000014401) #28	ZNF366 (ENSMPUG00000014399) #29	ENSMPUG00000014398	ENSMPUG00000014397	TNPO1 (ENSMPUG00000014387) #31	FCHO2 (ENSMPUG00000014378) #33
Canidae	ANCESTRAL SPECIES	29	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586.m.a.a	ENSGT00390000009578 #7	ENSGT00390000017443.g.a.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.`b #14	ENSGT00940000155097.d.b #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793.w	ENSGT00390000012762 #22	ENSGT01030000236468	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.a.a ##28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b	ENSGT00940000157156
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000155754	ENSGT00940000154586.m.a.a.b.b	ENSGT00940000154586.m.a.a.a	ENSGT00390000009578 #7	ENSGT00390000017443.g.a.b #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930.`b #14	ENSGT00940000155097.d.b.a #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793.w	ENSGT00390000012762 #22	ENSGT01030000236468	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.a.a ##28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b	ENSGT00940000157156
Dog	MODERN SPECIES	11	ENSCAFG00845011909	CENPH (ENSCAFG00845011938) #7	MRPS36 (ENSCAFG00845012007) #8	CDK7 (ENSCAFG00845012080) #9	ENSCAFG00845012162	CCDC125 (ENSCAFG00845012207) #11	AK6 (ENSCAFG00845012393) #14	TAF9 (ENSCAFG00845012450) #13	RAD17 (ENSCAFG00845012519) #15	MARVELD2 (ENSCAFG00845012629) #16	ENSCAFG00845012701	OCLN (ENSCAFG00845012752) #17	GTF2H2 (ENSCAFG00845012879) #18	SMN (ENSCAFG00845013100) #20	ENSCAFG00845013220	ENSCAFG00845013265 #22	MCCC2 (ENSCAFG00845000193) #24	CARTPT (ENSCAFG00845000216) #25	MAP1B (ENSCAFG00845000226) #26	MRPS27 (ENSCAFG00845000273) #27	PTCD2 (ENSCAFG00845000330) ##28	ZNF366 (ENSCAFG00845000383) #29	ENSCAFG00845000406	TNPO1 (ENSCAFG00845000423) #31	FCHO2 (ENSCAFG00845000523) #33	TMEM171 (ENSCAFG00845000659) #34	TMEM174 (ENSCAFG00845000674) #35	ENSCAFG00845000688 #37	RPS24 (ENSCAFG00845000696)	ENSCAFG00845000702	BTF3 (ENSCAFG00845000717)
Dingo	MODERN SPECIES	41	PIK3R1 (ENSCAFG00020019414)	SLC30A5 (ENSCAFG00020019408)	ENSCAFG00020019407	ENSCAFG00020019405	CENPH (ENSCAFG00020019399) #7	ENSCAFG00020019394	CDK7 (ENSCAFG00020019263) #9	CCDC125 (ENSCAFG00020019253) #11	ENSCAFG00020019246 #14	RAD17 (ENSCAFG00020019244) #15	MARVELD2 (ENSCAFG00020019241) #16	OCLN (ENSCAFG00020019239) #17	ENSCAFG00020019234 #18	ENSCAFG00020019229 #20	ENSCAFG00020019224	BDP1 (ENSCAFG00020019184) #22	ENSCAFG00020019179	MCCC2 (ENSCAFG00020019174) #24	CARTPT (ENSCAFG00020019171) #25	ENSCAFG00020019157 #26	ENSCAFG00020019156 #26	MRPS27 (ENSCAFG00020019151) #27	PTCD2 (ENSCAFG00020019147) ##28	ZNF366 (ENSCAFG00020019136) #29	ENSCAFG00020019131	TNPO1 (ENSCAFG00020017397) #31	ENSCAFG00020017303 #33	ENSCAFG00020017251 #33	TMEM171 (ENSCAFG00020017246) #34	TMEM174 (ENSCAFG00020017244) #35	ENSCAFG00020017241
Red fox	MODERN SPECIES	4	CD180 (ENSVVUG00000006515)	PIK3R1 (ENSVVUG00000006604)	SLC30A5 (ENSVVUG00000006638)	CCNB1 (ENSVVUG00000006649)	CENPH (ENSVVUG00000006775) #7	ENSVVUG00000006781 #8	CDK7 (ENSVVUG00000006786) #9	CCDC125 (ENSVVUG00000006801) #11	ENSVVUG00000006807 #13	RAD17 (ENSVVUG00000006809) #15	MARVELD2 (ENSVVUG00000006817) #16	OCLN (ENSVVUG00000006824) #17	ENSVVUG00000006838 #18	ENSVVUG00000006934 #20	ENSVVUG00000006944	BDP1 (ENSVVUG00000006951) #22	ENSVVUG00000007174	MCCC2 (ENSVVUG00000007202) #24	CARTPT (ENSVVUG00000007224) #25	ENSVVUG00000007245 #26	MAP1B (ENSVVUG00000007249) #26	ENSVVUG00000007276 #27	PTCD2 (ENSVVUG00000007299) ##28	ENSVVUG00000007333	TNPO1 (ENSVVUG00000007338) #31	FCHO2 (ENSVVUG00000007431) #33	ENSVVUG00000007461	TMEM171 (ENSVVUG00000007463) #34	TMEM174 (ENSVVUG00000007468) #35	BTF3 (ENSVVUG00000007479)	ANKRA2 (ENSVVUG00000007498)
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949.c #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000153524.b.a.b.k	ENSGT00940000155186.q.a	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.e.a #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949.c #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000153524.b.a.b.k	ENSGT00940000155186.q.a	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b
Tiger	MODERN SPECIES	134	PIK3R1 (ENSPTIG00000019204)	SLC30A5 (ENSPTIG00000018637)	CCNB1 (ENSPTIG00000018373)	CENPH (ENSPTIG00000018173) #7	ENSPTIG00000018048 #8	CDK7 (ENSPTIG00000017478) #9	CCDC125 (ENSPTIG00000017345) #11	AK6 (ENSPTIG00000016613) #14	RAD17 (ENSPTIG00000014986) #15	MARVELD2 (ENSPTIG00000014501) #16	OCLN (ENSPTIG00000013763) #17	ENSPTIG00000012454 #18	NAIP (ENSPTIG00000010475) #19	ENSPTIG00000007745 #20	ENSPTIG00000007240	ENSPTIG00000006819 #22	MCCC2 (ENSPTIG00000005536) #24	CARTPT (ENSPTIG00000003561) #25	MAP1B (ENSPTIG00000001913) #26	MRPS27 (ENSPTIG00000020435) #27	ENSPTIG00000020146 #28	ZNF366 (ENSPTIG00000019921) #29	ENSPTIG00000005718	TNPO1 (ENSPTIG00000018839) #31	FCHO2 (ENSPTIG00000016921) #33	TMEM171 (ENSPTIG00000016423) #34	TMEM174 (ENSPTIG00000016234) #35	ENSPTIG00000016139	ANKRA2 (ENSPTIG00000015943)	UTP15 (ENSPTIG00000014484)	ARHGEF28 (ENSPTIG00000008258)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443.e.a #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000163559 #19	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949.c #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000153524.b.a.b.k	ENSGT00940000155186.q.a	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329.b #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000161645.a #37	ENSGT00940000153288.a.b.a.b
leopard	MODERN SPECIES	40	ENSPPRG00000021771	SLC30A5 (ENSPPRG00000022743)	CCNB1 (ENSPPRG00000022617)	CENPH (ENSPPRG00000000509) #7	ENSPPRG00000000904 #8	CDK7 (ENSPPRG00000002820) #9	CCDC125 (ENSPPRG00000003385) #11	AK6 (ENSPPRG00000004638) #14	RAD17 (ENSPPRG00000012257) #15	MARVELD2 (ENSPPRG00000017299) #16	OCLN (ENSPPRG00000020191) #17	ENSPPRG00000022983 #18	ENSPPRG00000001912	ENSPPRG00000005575 #20	ENSPPRG00000006137	ENSPPRG00000008163 #22	ENSPPRG00000009857 #24	ENSPPRG00000010603	CARTPT (ENSPPRG00000011227) #25	ENSPPRG00000011438	ENSPPRG00000015657	MAP1B (ENSPPRG00000012301) #26	MRPS27 (ENSPPRG00000014416) #27	ENSPPRG00000016546 #28	ZNF366 (ENSPPRG00000017602) #29	ENSPPRG00000015830	TNPO1 (ENSPPRG00000022336) #31	FCHO2 (ENSPPRG00000000983) #33	TMEM171 (ENSPPRG00000001762) #34	TMEM174 (ENSPPRG00000002055) #35	FOXD1 (ENSPPRG00000015999) #37
lion	MODERN SPECIES		CD180 (ENSPLOG00000004944)	PIK3R1 (ENSPLOG00000004905)	SLC30A5 (ENSPLOG00000004858)	CCNB1 (ENSPLOG00000004842)	CENPH (ENSPLOG00000004826) #7	ENSPLOG00000004388 #8	CCDC125 (ENSPLOG00000004372) #11	AK6 (ENSPLOG00000004341) #14	RAD17 (ENSPLOG00000004258) #15	MARVELD2 (ENSPLOG00000004172) #16	OCLN (ENSPLOG00000004146) #17	ENSPLOG00000004112 #18	NAIP (ENSPLOG00000004070) #19	ENSPLOG00000004016 #20	ENSPLOG00000003990	BDP1 (ENSPLOG00000003876) #22	MCCC2 (ENSPLOG00000003740) #24	CARTPT (ENSPLOG00000003704) #25	ENSPLOG00000003695	ENSPLOG00000003688	MAP1B (ENSPLOG00000003672) #26	MRPS27 (ENSPLOG00000003633) #27	PTCD2 (ENSPLOG00000003582) #28	ZNF366 (ENSPLOG00000003554) #29	ENSPLOG00000003540	TNPO1 (ENSPLOG00000003467) #31	ENSPLOG00000003418	FCHO2 (ENSPLOG00000003353) #33	TMEM171 (ENSPLOG00000003289) #34	TMEM174 (ENSPLOG00000003276) #35	FOXD1 (ENSPLOG00000003268) #37
Cat	MODERN SPECIES		PIK3R1 (ENSFCAG00000011030)	SLC30A5 (ENSFCAG00000008198)	ENSFCAG00000047158	CCNB1 (ENSFCAG00000001572)	CENPH (ENSFCAG00000037516) #7	CDK7 (ENSFCAG00000004827) #9	CCDC125 (ENSFCAG00000002485) #11	AK6 (ENSFCAG00000031227) #13	RAD17 (ENSFCAG00000002487) #15	MARVELD2 (ENSFCAG00000022414) #16	OCLN (ENSFCAG00000007708) #17	ENSFCAG00000028495 #18	ENSFCAG00000026006	SMN2 (ENSFCAG00000028292) #20	ENSFCAG00000039482	BDP1 (ENSFCAG00000031814) #22	ENSFCAG00000013911 #24	CARTPT (ENSFCAG00000003084) #25	ENSFCAG00000030938	ENSFCAG00000035620	MAP1B (ENSFCAG00000005451) #26	MRPS27 (ENSFCAG00000005452) #27	PTCD2 (ENSFCAG00000045432) #28	ZNF366 (ENSFCAG00000005456) #29	H2BL1 (ENSFCAG00000030795)	ENSFCAG00000047567	TNPO1 (ENSFCAG00000013181) #31	FCHO2 (ENSFCAG00000002158) #33	TMEM171 (ENSFCAG00000002161) #34	TMEM174 (ENSFCAG00000043253) #35	FOXD1 (ENSFCAG00000040483) #37
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329 #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Xenarthra	ANCESTRAL SPECIES	169	ENSGT00940000161183	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25
Armadillo	MODERN SPECIES	2255	ENSDNOG00000048503	ENSDNOG00000039108 #7	ENSDNOG00000033430	ENSDNOG00000017969	ENSDNOG00000014292 #8	CDK7 (ENSDNOG00000039894) #9	CCDC125 (ENSDNOG00000008582) #11	ENSDNOG00000030866	ENSDNOG00000024524 #14	RAD17 (ENSDNOG00000004852) #15	MARVELD2 (ENSDNOG00000007758) #16	OCLN (ENSDNOG00000035828) #17	ENSDNOG00000048390 #18	ENSDNOG00000007283 #20	ENSDNOG00000048018	BDP1 (ENSDNOG00000004929) #22	MCCC2 (ENSDNOG00000047623) #24	CARTPT (ENSDNOG00000042343) #25
Sloth	MODERN SPECIES	3763																ENSCHOG00000006033 #22
Afrotheria	ANCESTRAL SPECIES	12	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329 #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Tenrec	MODERN SPECIES	2786																ENSETEG00000011004 #22
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT00940000155553	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578 #7	ENSGT00390000017443 #8	ENSGT00940000155179 #9	ENSGT00440000039958 #11	ENSGT00390000015930 #14	ENSGT00940000155097 #13	ENSGT00440000039046 #15	ENSGT00940000155771 #16	ENSGT00730000110989 #17	ENSGT00490000043395 #18	ENSGT00940000153352.A #20	ENSGT00940000161793	ENSGT00390000012762 #22	ENSGT00940000155949 #24	ENSGT00390000018319.a.b.a #25	ENSGT00940000155897 #26	ENSGT00390000007246 #27	ENSGT00390000009329 #28	ENSGT00940000155498 #29	ENSGT01100000263506.b.b	ENSGT00940000155389 #31	ENSGT00940000157105 #33	ENSGT00390000017024 #34	ENSGT00390000004161 #35	ENSGT00940000153288.a.b.a.a	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Hyrax	MODERN SPECIES	2269																BDP1 (ENSPCAG00000011818) #22
Elephant	DUPLICATION
Elephant	MODERN SPECIES	526	ENSLAFG00000032695	SLC30A5 (ENSLAFG00000009364)	CCNB1 (ENSLAFG00000032029)	MRPS36 (ENSLAFG00000007932) #8	CDK7 (ENSLAFG00000012072) #9	CCDC125 (ENSLAFG00000012078) #11	AK6 (ENSLAFG00000020808) #14	TAF9 (ENSLAFG00000012084) #13	RAD17 (ENSLAFG00000012085) #15	MARVELD2 (ENSLAFG00000012087) #16	ENSLAFG00000004799 #17	ENSLAFG00000010244 #18	ENSLAFG00000003425 #20	ENSLAFG00000031695	ENSLAFG00000031494 #22	ENSLAFG00000003175 #22	MCCC2 (ENSLAFG00000006317) #24	CARTPT (ENSLAFG00000030958) #25	MAP1B (ENSLAFG00000015105) #26	MRPS27 (ENSLAFG00000004110) #27	PTCD2 (ENSLAFG00000004115) #28	ZNF366 (ENSLAFG00000030138) #29	ENSLAFG00000028707	TNPO1 (ENSLAFG00000011796) #31	FCHO2 (ENSLAFG00000011804) #33	TMEM171 (ENSLAFG00000015910) #34	TMEM174 (ENSLAFG00000011713) #35	ENSLAFG00000032656	ANKRA2 (ENSLAFG00000012578)	UTP15 (ENSLAFG00000002596)	ARHGEF28 (ENSLAFG00000011204)
Elephant	MODERN SPECIES	526	PIK3R1 (ENSLAFG00000018267)	ENSLAFG00000032695	SLC30A5 (ENSLAFG00000009364)	CCNB1 (ENSLAFG00000032029)	MRPS36 (ENSLAFG00000007932) #8	CDK7 (ENSLAFG00000012072) #9	CCDC125 (ENSLAFG00000012078) #11	AK6 (ENSLAFG00000020808) #14	TAF9 (ENSLAFG00000012084) #13	RAD17 (ENSLAFG00000012085) #15	MARVELD2 (ENSLAFG00000012087) #16	ENSLAFG00000004799 #17	ENSLAFG00000010244 #18	ENSLAFG00000003425 #20	ENSLAFG00000031695	ENSLAFG00000031494 #22	ENSLAFG00000003175 #22	MCCC2 (ENSLAFG00000006317) #24	CARTPT (ENSLAFG00000030958) #25	MAP1B (ENSLAFG00000015105) #26	MRPS27 (ENSLAFG00000004110) #27	PTCD2 (ENSLAFG00000004115) #28	ZNF366 (ENSLAFG00000030138) #29	ENSLAFG00000028707	TNPO1 (ENSLAFG00000011796) #31	FCHO2 (ENSLAFG00000011804) #33	TMEM171 (ENSLAFG00000015910) #34	TMEM174 (ENSLAFG00000011713) #35	ENSLAFG00000032656	ANKRA2 (ENSLAFG00000012578)	UTP15 (ENSLAFG00000002596)