Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00960000187108 #14	ENSGT00390000012138.a.a.j.b ##13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT00940000153773.a.b.a.a	ENSGT01090000260040.a.a.a.r
Primates	ANCESTRAL SPECIES	20	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b	ENSGT00440000033468.c.b	ENSGT00940000155788
Rhinopithecus	ANCESTRAL SPECIES	71	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00390000004027	ENSGT00550000074828.a.g.a.g.a	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00960000187108 #14	ENSGT00420000029792.q.e #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.b.u	ENSGT00390000003465.b.b	ENSGT00440000033468.c.b	ENSGT00390000002944.f	ENSGT00940000155788
Golden snub-nosed monkey	MODERN SPECIES	2534		TSPYL5 (ENSRROG00000029533) #8	MTDH (ENSRROG00000032544) #9	LAPTM4B (ENSRROG00000029250) #10	ENSRROG00000036170 #11	MATN2 (ENSRROG00000043967) #12	RPL30 (ENSRROG00000035327) #13	ENSRROG00000030277 #14	ENSRROG00000037373 #15	POP1 (ENSRROG00000012334) #16	ENSRROG00000000099 #17	NIPAL2 (ENSRROG00000006090) #18	KCNS2 (ENSRROG00000026392) #19	STK3 (ENSRROG00000003417) #20	ENSRROG00000038956 #21	OSR2 (ENSRROG00000039787) #22	ENSRROG00000028742 #23	VPS13B (ENSRROG00000037771) #24	ENSRROG00000037927 #25
Black snub-nosed monkey	MODERN SPECIES	32												ENSRBIG00000042178	KCNS2 (ENSRBIG00000021207) #19	STK3 (ENSRBIG00000035317) #20	ENSRBIG00000035855 #21	OSR2 (ENSRBIG00000031817) #22	ENSRBIG00000031283	ENSRBIG00000039514 #24
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b	ENSGT00440000033468.c.b	ENSGT00940000155788
Vervet Monkey	MODERN SPECIES	27	PTDSS1 (ENSCSAG00000012419)	ENSCSAG00000018596	SDC2 (ENSCSAG00000012405)	CPQ (ENSCSAG00000012387)	TSPYL5 (ENSCSAG00000018598) #8	ENSCSAG00000018600	MTDH (ENSCSAG00000012378) #9	LAPTM4B (ENSCSAG00000012372) #10	MATN2 (ENSCSAG00000012367) #12	RPL30 (ENSCSAG00000012353) #13	ERICH5 (ENSCSAG00000012345)	POP1 (ENSCSAG00000012340) #16	NIPAL2 (ENSCSAG00000012328) #18	KCNS2 (ENSCSAG00000018602) #19	STK3 (ENSCSAG00000012319) #20	OSR2 (ENSCSAG00000012312) #22	VPS13B (ENSCSAG00000012302) #24	RGS22 (ENSCSAG00000012276)	FBXO43 (ENSCSAG00000012174)	POLR2K (ENSCSAG00000012163)	SPAG1 (ENSCSAG00000012110)	RNF19A (ENSCSAG00000012091)	ANKRD46 (ENSCSAG00000012085)	SNX31 (ENSCSAG00000012041)	PABPC1 (ENSCSAG00000012017)	YWHAZ (ENSCSAG00000012007)	ZNF706 (ENSCSAG00000011997)	GRHL2 (ENSCSAG00000011989)	NCALD (ENSCSAG00000011979)	ENSCSAG00000018603	RRM2B (ENSCSAG00000011973)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00390000011196.f	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b	ENSGT00440000033468.c.b
Macaca	ANCESTRAL SPECIES	14	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00390000012138.a.a.j.b ##13	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00390000011196.f	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00940000164643	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b
Pig-tailed macaque	MODERN SPECIES	535	SDC2 (ENSMNEG00000034045)	CPQ (ENSMNEG00000029476)	TSPYL5 (ENSMNEG00000031452) #8	MTDH (ENSMNEG00000033304) #9	LAPTM4B (ENSMNEG00000032174) #10	ENSMNEG00000042996	MATN2 (ENSMNEG00000040955) #12	ENSMNEG00000037277 ##13	ERICH5 (ENSMNEG00000036206)	ENSMNEG00000038879 #15	POP1 (ENSMNEG00000036870) #16	NIPAL2 (ENSMNEG00000036093) #18	KCNS2 (ENSMNEG00000023430) #19	STK3 (ENSMNEG00000028293) #20	ENSMNEG00000036946 #21	OSR2 (ENSMNEG00000028787) #22	ENSMNEG00000034864	VPS13B (ENSMNEG00000029094) #24	COX6C (ENSMNEG00000030335) #25	RGS22 (ENSMNEG00000043087)	FBXO43 (ENSMNEG00000036160)	ENSMNEG00000042506	SPAG1 (ENSMNEG00000028691)	RNF19A (ENSMNEG00000030685)	ANKRD46 (ENSMNEG00000032302)	SNX31 (ENSMNEG00000041333)	PABPC1 (ENSMNEG00000009340)	ENSMNEG00000041365	ZNF706 (ENSMNEG00000029722)	ENSMNEG00000034441	GRHL2 (ENSMNEG00000038814)
Macaca_a	ANCESTRAL SPECIES	16	ENSGT01030000236289.a.a.b	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00550000074784.a.b	ENSGT01030000234916.d	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00390000011196.f	ENSGT00500000044936	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000161627.a.a.a.a.a.b.b.a.a.b	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000169819	ENSGT00900000143336	ENSGT00940000164709.a.a.a
Rhesus	MODERN SPECIES	18	CPQ (ENSMMUG00000003878)	ENSMMUG00000058134	TSPYL5 (ENSMMUG00000062721) #8	ENSMMUG00000055454	MTDH (ENSMMUG00000014210) #9	LAPTM4B (ENSMMUG00000008926) #10	ENSMMUG00000060771	MATN2 (ENSMMUG00000020072) #12	RPL30 (ENSMMUG00000020073) #13	ENSMMUG00000058389	ENSMMUG00000064281 #15	POP1 (ENSMMUG00000053292) #16	NIPAL2 (ENSMMUG00000017815) #18	KCNS2 (ENSMMUG00000056926) #19	STK3 (ENSMMUG00000028952) #20	OSR2 (ENSMMUG00000022185) #22	VPS13B (ENSMMUG00000022186) #24	ENSMMUG00000056333	COX6C (ENSMMUG00000000165) #25	ENSMMUG00000013741	RGS22 (ENSMMUG00000013742)	SPAG1 (ENSMMUG00000004386)	ENSMMUG00000061687	RNF19A (ENSMMUG00000004387)	ENSMMUG00000051088	ANKRD46 (ENSMMUG00000009958)	SNX31 (ENSMMUG00000009952)	PABPC1 (ENSMMUG00000017786)	YWHAZ (ENSMMUG00000006489)	ZNF706 (ENSMMUG00000006943)	ENSMMUG00000053114
Crab-eating macaque	MODERN SPECIES	18	ENSMFAG00000058643	MTDH (ENSMFAG00000039516) #9	LAPTM4B (ENSMFAG00000042049) ##10	ENSMFAG00000064852	ENSMFAG00000031152	MATN2 (ENSMFAG00000042275) #12	ENSMFAG00000047873 #11	RPL30 (ENSMFAG00000031945) #13	ERICH5 (ENSMFAG00000002519)	ENSMFAG00000028633 #15	POP1 (ENSMFAG00000000347) #16	NIPAL2 (ENSMFAG00000027246) #18	KCNS2 (ENSMFAG00000030529) #19	STK3 (ENSMFAG00000000855) #20	ENSMFAG00000041731 #21	OSR2 (ENSMFAG00000030128) #22	ENSMFAG00000048508	VPS13B (ENSMFAG00000034665) #24	COX6C (ENSMFAG00000050069) #25	ENSMFAG00000000071	RGS22 (ENSMFAG00000000941)	POLR2K (ENSMFAG00000053611)	SPAG1 (ENSMFAG00000027456)	RNF19A (ENSMFAG00000044073)	ENSMFAG00000063483	ANKRD46 (ENSMFAG00000043665)	SNX31 (ENSMFAG00000042840)	PABPC1 (ENSMFAG00000044845)	ENSMFAG00000001740	ENSMFAG00000060175	ENSMFAG00000058793
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.a.a ##10	ENSGT01030000234916	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00390000011196.f	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b.t.a	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b
Olive baboon	MODERN SPECIES	18	ENSPANG00000046257	ENSPANG00000043352	MTDH (ENSPANG00000007132) #9	ENSPANG00000021264 ##10	ENSPANG00000016901	MATN2 (ENSPANG00000024751) #12	RPL30 (ENSPANG00000035317) #13	ERICH5 (ENSPANG00000006288)	RIDA (ENSPANG00000030103) #15	POP1 (ENSPANG00000009704) #16	NIPAL2 (ENSPANG00000005207) #18	KCNS2 (ENSPANG00000024000) #19	STK3 (ENSPANG00000018589) #20	ENSPANG00000040621	ENSPANG00000018676 #21	OSR2 (ENSPANG00000012764) #22	VPS13B (ENSPANG00000007131) #24	ENSPANG00000042660	COX6C (ENSPANG00000031090) #25	ENSPANG00000037459	RGS22 (ENSPANG00000006695)	ENSPANG00000047102	FBXO43 (ENSPANG00000006694)	POLR2K (ENSPANG00000031381)	SPAG1 (ENSPANG00000018546)	RNF19A (ENSPANG00000021913)	ANKRD46 (ENSPANG00000000325)	SNX31 (ENSPANG00000018545)	PABPC1 (ENSPANG00000010645)	ENSPANG00000041498	ENSPANG00000048393
Cercopithecinae_d	ANCESTRAL SPECIES	92	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153097.A.e.a.a.b.a.a.e.b	ENSGT00940000153446.a.a.q.b #10	ENSGT00550000074784.a.b	ENSGT00910000147071 #11	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792.q #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00390000011196.f	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b.t.a	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b
Sooty mangabey	MODERN SPECIES	658	TSPYL5 (ENSCATG00000043927) #8	MTDH (ENSCATG00000036029) #9	ENSCATG00000019683	LAPTM4B (ENSCATG00000041068) #10	ENSCATG00000030012	MATN2 (ENSCATG00000015517) #12	ENSCATG00000026374 #11	RPL30 (ENSCATG00000027534) #13	ERICH5 (ENSCATG00000032257)	ENSCATG00000035684 #15	POP1 (ENSCATG00000040916) #16	NIPAL2 (ENSCATG00000036767) #18	KCNS2 (ENSCATG00000017758) #19	STK3 (ENSCATG00000026061) #20	ENSCATG00000001750	OSR2 (ENSCATG00000044939) #22	VPS13B (ENSCATG00000035674) #24	COX6C (ENSCATG00000041529) #25	RGS22 (ENSCATG00000037557)	FBXO43 (ENSCATG00000040501)	POLR2K (ENSCATG00000007143)	SPAG1 (ENSCATG00000037794)	RNF19A (ENSCATG00000037706)	ANKRD46 (ENSCATG00000035515)	SNX31 (ENSCATG00000035665)	PABPC1 (ENSCATG00000039184)	ENSCATG00000024186	ZNF706 (ENSCATG00000031731)	ENSCATG00000032859	GRHL2 (ENSCATG00000023707)	NCALD (ENSCATG00000043115)
Drill	MODERN SPECIES	1326	TSPYL5 (ENSMLEG00000029503) #8	MTDH (ENSMLEG00000031470) #9	ENSMLEG00000022228	LAPTM4B (ENSMLEG00000037249) #10	MATN2 (ENSMLEG00000020381) #12	ENSMLEG00000042330 #11	RPL30 (ENSMLEG00000036764) #13	ERICH5 (ENSMLEG00000041974)	ENSMLEG00000000048 #15	POP1 (ENSMLEG00000034986) #16	NIPAL2 (ENSMLEG00000018604) #18	ENSMLEG00000032863	KCNS2 (ENSMLEG00000008880) #19	STK3 (ENSMLEG00000028343) #20	ENSMLEG00000038589 #21	OSR2 (ENSMLEG00000034070) #22	ENSMLEG00000033951 #24
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00390000015318.c	ENSGT01030000234916	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00390000010391.w.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.a.a	ENSGT01090000260040.a.a.b
Hominidae	ANCESTRAL SPECIES	15	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00390000015318.c	ENSGT01030000234916	ENSGT00550000074784.a.b	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00390000010391.w.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b	ENSGT00440000033468.c.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000166912	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000158854	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00390000010391.w.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b.o.a	ENSGT00440000033468.c.b
Gorilla	MODERN SPECIES	21	MTDH (ENSGGOG00000000539) #9	ENSGGOG00000000543 #10	ENSGGOG00000036904	ENSGGOG00000013111	MATN2 (ENSGGOG00000015748) #12	ENSGGOG00000037587 #11	RPL30 (ENSGGOG00000005502) #13	ERICH5 (ENSGGOG00000001184)	RIDA (ENSGGOG00000001185) #15	POP1 (ENSGGOG00000003176) #16	NIPAL2 (ENSGGOG00000002387) #18	ENSGGOG00000028028	KCNS2 (ENSGGOG00000002797) #19	STK3 (ENSGGOG00000034989) #20	ENSGGOG00000025398 #21	ENSGGOG00000006716 #22	ENSGGOG00000039991	VPS13B (ENSGGOG00000034850) #24	COX6C (ENSGGOG00000013771) #25	RGS22 (ENSGGOG00000039315)	FBXO43 (ENSGGOG00000000296)	POLR2K (ENSGGOG00000024539)	SPAG1 (ENSGGOG00000010949)	RNF19A (ENSGGOG00000026234)	ANKRD46 (ENSGGOG00000012039)	SNX31 (ENSGGOG00000023807)	PABPC1 (ENSGGOG00000006785)	ENSGGOG00000022133	ZNF706 (ENSGGOG00000043557)	ENSGGOG00000025511	GRHL2 (ENSGGOG00000004401)
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000166912	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00390000010391.w.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b.o.a	ENSGT00440000033468.c.b	ENSGT01090000260040.a.a.b
Pan	ANCESTRAL SPECIES	11	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.b #10	ENSGT00390000015318.c	ENSGT00940000158008 #12	ENSGT00910000147071 #11	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000166912	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000163468 #21	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b.o.a	ENSGT00440000033468.c.b	ENSGT00940000155788	ENSGT00390000002944.f
Chimpanzee	MODERN SPECIES	21	TSPYL5 (ENSPTRG00000020445) #8	MTDH (ENSPTRG00000020447) #9	LAPTM4B (ENSPTRG00000020448) #10	ENSPTRG00000046478	MATN2 (ENSPTRG00000020451) #12	ENSPTRG00000044251 #11	RPL30 (ENSPTRG00000020454) #13	ERICH5 (ENSPTRG00000020456)	RIDA (ENSPTRG00000020457) #15	POP1 (ENSPTRG00000020458) #16	NIPAL2 (ENSPTRG00000045973) #18	ENSPTRG00000044772	KCNS2 (ENSPTRG00000039728) #19	STK3 (ENSPTRG00000020462) #20	ENSPTRG00000046155 #21	OSR2 (ENSPTRG00000020463) #22	VPS13B (ENSPTRG00000020464) #24	ENSPTRG00000044726 #24	COX6C (ENSPTRG00000020467) #25	RGS22 (ENSPTRG00000020468)	FBXO43 (ENSPTRG00000020469)	POLR2K (ENSPTRG00000020470)	SPAG1 (ENSPTRG00000020471)	ENSPTRG00000046118	RNF19A (ENSPTRG00000020472)	ANKRD46 (ENSPTRG00000020473)	SNX31 (ENSPTRG00000020474)	PABPC1 (ENSPTRG00000047939)	ENSPTRG00000048115	ZNF706 (ENSPTRG00000051229)	ENSPTRG00000043738
Bonobo	MODERN SPECIES	21	ENSPPAG00000039769 #8	MTDH (ENSPPAG00000029418) #9	LAPTM4B (ENSPPAG00000036266) #10	ENSPPAG00000037414	MATN2 (ENSPPAG00000034929) #12	ENSPPAG00000028070 #11	RPL30 (ENSPPAG00000038382) #13	ERICH5 (ENSPPAG00000044093)	RIDA (ENSPPAG00000029672) #15	POP1 (ENSPPAG00000018410) #16	NIPAL2 (ENSPPAG00000021828) #18	ENSPPAG00000036120	KCNS2 (ENSPPAG00000004420) #19	STK3 (ENSPPAG00000040970) #20	ENSPPAG00000040796 #21	ENSPPAG00000032547 #22	VPS13B (ENSPPAG00000033105) #24	COX6C (ENSPPAG00000042115) #25	RGS22 (ENSPPAG00000012382)	FBXO43 (ENSPPAG00000029949)	POLR2K (ENSPPAG00000040441)	SPAG1 (ENSPPAG00000025949)	ENSPPAG00000033843	RNF19A (ENSPPAG00000034676)	ANKRD46 (ENSPPAG00000028250)	SNX31 (ENSPPAG00000037934)	ENSPPAG00000037498	ENSPPAG00000038734	ENSPPAG00000027115	ENSPPAG00000003654	GRHL2 (ENSPPAG00000042743)
Human	MODERN SPECIES	20	MTERF3 (ENSG00000156469)	PTDSS1 (ENSG00000156471)	SDC2 (ENSG00000169439)	CPQ (ENSG00000104324)	TSPYL5 (ENSG00000180543) #8	MTDH (ENSG00000147649) #9	LAPTM4B (ENSG00000104341) #10	MATN2 (ENSG00000132561) #12	RPL30 (ENSG00000156482) #13	ERICH5 (ENSG00000177459)	RIDA (ENSG00000132541) #15	POP1 (ENSG00000104356) #16	NIPAL2 (ENSG00000104361) #18	STK3 (ENSG00000104375) #20	KCNS2 (ENSG00000156486) #19	OSR2 (ENSG00000164920) #22	VPS13B (ENSG00000132549) #24	COX6C (ENSG00000164919) #25	RGS22 (ENSG00000132554)	FBXO43 (ENSG00000156509)	POLR2K (ENSG00000147669)	SPAG1 (ENSG00000104450)	RNF19A (ENSG00000034677)	ANKRD46 (ENSG00000186106)	SNX31 (ENSG00000174226)	PABPC1 (ENSG00000070756)	YWHAZ (ENSG00000164924)	ZNF706 (ENSG00000120963)	GRHL2 (ENSG00000083307)	NCALD (ENSG00000104490)	RRM2B (ENSG00000048392)
Orangutan	MODERN SPECIES	21	SDC2 (ENSPPYG00000032941)	CPQ (ENSPPYG00000018768)	TSPYL5 (ENSPPYG00000018769) #8	MTDH (ENSPPYG00000018770) #9	ENSPPYG00000018771 #10	ENSPPYG00000038790	ENSPPYG00000018772	MATN2 (ENSPPYG00000018773) #12	RPL30 (ENSPPYG00000018774) #13	ERICH5 (ENSPPYG00000018775)	RIDA (ENSPPYG00000018776) #15	POP1 (ENSPPYG00000018777) #16	NIPAL2 (ENSPPYG00000018778) #18	KCNS2 (ENSPPYG00000018779) #19	STK3 (ENSPPYG00000018780) #20	ENSPPYG00000018781 #22	VPS13B (ENSPPYG00000018782) #24	COX6C (ENSPPYG00000030699) #25	RGS22 (ENSPPYG00000018784)	FBXO43 (ENSPPYG00000018785)	POLR2K (ENSPPYG00000018786)	SPAG1 (ENSPPYG00000018787)	RNF19A (ENSPPYG00000039695)	ANKRD46 (ENSPPYG00000018788)	SNX31 (ENSPPYG00000018789)	PABPC1 (ENSPPYG00000018790)	YWHAZ (ENSPPYG00000018791)	ENSPPYG00000018792	ENSPPYG00000035143	ENSPPYG00000033958	GRHL2 (ENSPPYG00000018794)
Gibbon	MODERN SPECIES	6	RAB2A (ENSNLEG00000036148)	CHD7 (ENSNLEG00000002027)	ENSNLEG00000033557	ENSNLEG00000035467	ENSNLEG00000033932	ENSNLEG00000002143	CLVS1 (ENSNLEG00000002146)	ASPH (ENSNLEG00000002208)	ERICH5 (ENSNLEG00000002460)	RIDA (ENSNLEG00000027254) #15	POP1 (ENSNLEG00000002541) #16	NIPAL2 (ENSNLEG00000002626) #18	ENSNLEG00000030963	STK3 (ENSNLEG00000002668) #20	ENSNLEG00000027654 #21	ENSNLEG00000002725 #22	ENSNLEG00000002742 #24	ENSNLEG00000029708 #24	COX6C (ENSNLEG00000002864) #25	RGS22 (ENSNLEG00000002877)	FBXO43 (ENSNLEG00000002980)	ENSNLEG00000002993	SPAG1 (ENSNLEG00000002998)	ENSNLEG00000030526	RNF19A (ENSNLEG00000003030)	ENSNLEG00000029724	ANKRD46 (ENSNLEG00000028498)	SNX31 (ENSNLEG00000003099)	ENSNLEG00000003142	YWHAZ (ENSNLEG00000030006)	ZNF706 (ENSNLEG00000003260)
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00390000012916.h	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.a.a.a.a ##10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00940000164643	ENSGT00390000010391.w.b	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b.s	ENSGT01090000260040.a.a.a.r	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b
Cebidae	ANCESTRAL SPECIES	19	ENSGT00390000012916.h	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.q.a.a.a.a ##10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.a.b	ENSGT00940000164643	ENSGT00390000010391.w.b	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788
Marmoset	MODERN SPECIES	7					MTDH (ENSCJAG00000005059) #9	ENSCJAG00000082247	ENSCJAG00000069717 ##10	MATN2 (ENSCJAG00000015501) #12	ENSCJAG00000015549 #13	ERICH5 (ENSCJAG00000015555)	RIDA (ENSCJAG00000015560) #15	POP1 (ENSCJAG00000015567) #16	NIPAL2 (ENSCJAG00000040562) #18	KCNS2 (ENSCJAG00000045971) #19	STK3 (ENSCJAG00000015597) #20	OSR2 (ENSCJAG00000015627) #22	VPS13B (ENSCJAG00000015651) #24	ENSCJAG00000076638 #25	RGS22 (ENSCJAG00000015721)	FBXO43 (ENSCJAG00000015760)	ENSCJAG00000080456	SPAG1 (ENSCJAG00000015770)	ENSCJAG00000066551	RNF19A (ENSCJAG00000015794)	ENSCJAG00000079952	ENSCJAG00000067452	ANKRD46 (ENSCJAG00000015816)	SNX31 (ENSCJAG00000015820)	PABPC1 (ENSCJAG00000015833)	ENSCJAG00000085316	YWHAZ (ENSCJAG00000015844)
Cebidae_a	ANCESTRAL SPECIES	120							ENSGT00940000153446.a.a.q.a.a.a.a ##10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00940000164643	ENSGT00390000010391.w.b	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A
Bolivian squirrel monkey	MODERN SPECIES	214							ENSSBOG00000032260 ##10	MATN2 (ENSSBOG00000002029) #12	RPL30 (ENSSBOG00000031109) #13	ERICH5 (ENSSBOG00000029799)	ENSSBOG00000022742 #15	POP1 (ENSSBOG00000020830) #16	NIPAL2 (ENSSBOG00000026543) #18	KCNS2 (ENSSBOG00000018618) #19	STK3 (ENSSBOG00000027109) #20	OSR2 (ENSSBOG00000035052) #22	VPS13B (ENSSBOG00000027822) #24	ENSSBOG00000024423 #25	ENSSBOG00000022499	RGS22 (ENSSBOG00000023420)	FBXO43 (ENSSBOG00000027482)	ENSSBOG00000022710	ENSSBOG00000029490	SPAG1 (ENSSBOG00000029976)	RNF19A (ENSSBOG00000035134)	ANKRD46 (ENSSBOG00000024414)	SNX31 (ENSSBOG00000024845)	PABPC1 (ENSSBOG00000022216)	ENSSBOG00000031022
Capuchin	MODERN SPECIES	331					ENSCCAG00000029765 ##10	MATN2 (ENSCCAG00000029967) #12	RPL30 (ENSCCAG00000027523) #13	ERICH5 (ENSCCAG00000028817)	RIDA (ENSCCAG00000023149) #15	POP1 (ENSCCAG00000018939) #16	NIPAL2 (ENSCCAG00000000911) #18	KCNS2 (ENSCCAG00000032229) #19	STK3 (ENSCCAG00000025276) #20	ENSCCAG00000001352	ENSCCAG00000029710 #21	OSR2 (ENSCCAG00000034941) #22	VPS13B (ENSCCAG00000032804) #24	COX6C (ENSCCAG00000033132) #25	RGS22 (ENSCCAG00000026508)	FBXO43 (ENSCCAG00000019811)	ENSCCAG00000019633	SPAG1 (ENSCCAG00000027750)	RNF19A (ENSCCAG00000028958)
Mas night monkey	MODERN SPECIES	857							MATN2 (ENSANAG00000032694) #12	ENSANAG00000035820 #13	ERICH5 (ENSANAG00000037689)	RIDA (ENSANAG00000024491) #15	POP1 (ENSANAG00000026360) #16	NIPAL2 (ENSANAG00000031601) #18	KCNS2 (ENSANAG00000008286) #19	ENSANAG00000023767	STK3 (ENSANAG00000028447) #20	OSR2 (ENSANAG00000034242) #22	ENSANAG00000019944	VPS13B (ENSANAG00000019941) #24	COX6C (ENSANAG00000030830) #25	RGS22 (ENSANAG00000036785)	FBXO43 (ENSANAG00000021154)	ENSANAG00000030050	ENSANAG00000035009	SPAG1 (ENSANAG00000028676)	RNF19A (ENSANAG00000030347)	ANKRD46 (ENSANAG00000033967)	SNX31 (ENSANAG00000033471)	PABPC1 (ENSANAG00000033352)	ENSANAG00000027160	ZNF706 (ENSANAG00000030246)	GRHL2 (ENSANAG00000030068)
Tarsier	MODERN SPECIES	3146																OSR2 (ENSTSYG00000013426) #22
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00940000164643	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Bushbaby	MODERN SPECIES	119	PTDSS1 (ENSOGAG00000004305)	ENSOGAG00000034918	SDC2 (ENSOGAG00000014867)	ENSOGAG00000027986	CPQ (ENSOGAG00000014871)	TSPYL5 (ENSOGAG00000025044) #8	MTDH (ENSOGAG00000002065) #9	ENSOGAG00000000512 #10	MATN2 (ENSOGAG00000000513) #12	ERICH5 (ENSOGAG00000001464)	ENSOGAG00000001465 #15	POP1 (ENSOGAG00000001466) #16	NIPAL2 (ENSOGAG00000024518) #18	KCNS2 (ENSOGAG00000029674) #19	STK3 (ENSOGAG00000016347) #20	OSR2 (ENSOGAG00000007928) #22	ENSOGAG00000034274	VPS13B (ENSOGAG00000007929) #24	RGS22 (ENSOGAG00000008411)	FBXO43 (ENSOGAG00000008418)	ENSOGAG00000008422	ENSOGAG00000008426	RNF19A (ENSOGAG00000007137)	ANKRD46 (ENSOGAG00000012234)	SNX31 (ENSOGAG00000012237)	PABPC1 (ENSOGAG00000007921)	ENSOGAG00000033497	ENSOGAG00000027151	ENSOGAG00000032973	GRHL2 (ENSOGAG00000004751)	NCALD (ENSOGAG00000034513)
Lemuriformes	ANCESTRAL SPECIES	24	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00730000111146.p	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Mouse lemur	MODERN SPECIES	31	CPQ (ENSMICG00000047973)	ENSMICG00000033375	ENSMICG00000010589 #9	LAPTM4B (ENSMICG00000038044) #10	ENSMICG00000044005	MATN2 (ENSMICG00000006923) #12	RPL30 (ENSMICG00000004620) #13	ENSMICG00000036228	ERICH5 (ENSMICG00000043438)	ENSMICG00000046083 #15	POP1 (ENSMICG00000004361) #16	ENSMICG00000038757	NIPAL2 (ENSMICG00000004367) #18	KCNS2 (ENSMICG00000047216) #19	STK3 (ENSMICG00000004379) #20	OSR2 (ENSMICG00000004390) #22	VPS13B (ENSMICG00000004392) #24	ENSMICG00000004456 #25	RGS22 (ENSMICG00000038466)	FBXO43 (ENSMICG00000041879)	POLR2K (ENSMICG00000044624)	SPAG1 (ENSMICG00000007495)	RNF19A (ENSMICG00000034867)	ANKRD46 (ENSMICG00000038072)	SNX31 (ENSMICG00000010234)	PABPC1 (ENSMICG00000009121)	ENSMICG00000034946	ENSMICG00000045227	ENSMICG00000034184	GRHL2 (ENSMICG00000014771)	NCALD (ENSMICG00000045417)
Lemuriformes_a	ANCESTRAL SPECIES	46	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00730000111146.p	ENSGT00960000187108 #14	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000169819	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b
Coquerels sifaka	MODERN SPECIES	288	MTERF3 (ENSPCOG00000024551)	PTDSS1 (ENSPCOG00000012653)	SDC2 (ENSPCOG00000025635)	CPQ (ENSPCOG00000013230)	MTDH (ENSPCOG00000014642) #9	LAPTM4B (ENSPCOG00000024247) #10	MATN2 (ENSPCOG00000028802) #12	RPL30 (ENSPCOG00000016608) #13	ENSPCOG00000022716	ENSPCOG00000013438 #14	ENSPCOG00000014936 #15	POP1 (ENSPCOG00000019420) #16	NIPAL2 (ENSPCOG00000015818) #18	KCNS2 (ENSPCOG00000003471) #19	STK3 (ENSPCOG00000021841) #20	OSR2 (ENSPCOG00000026580) #22	VPS13B (ENSPCOG00000027260) #24	COX6C (ENSPCOG00000028763) #25	RGS22 (ENSPCOG00000018902)	FBXO43 (ENSPCOG00000022956)	ENSPCOG00000019331	SPAG1 (ENSPCOG00000021388)	RNF19A (ENSPCOG00000003000)	ENSPCOG00000028413	SNX31 (ENSPCOG00000017253)	PABPC1 (ENSPCOG00000020234)	YWHAZ (ENSPCOG00000027987)	ZNF706 (ENSPCOG00000028713)	ENSPCOG00000028386	GRHL2 (ENSPCOG00000003815)	NCALD (ENSPCOG00000002430)
Greater bamboo lemur	MODERN SPECIES	13					MTDH (ENSPSMG00000011621) #9	LAPTM4B (ENSPSMG00000011676) #10	MATN2 (ENSPSMG00000011943) #12	ENSPSMG00000012033 #13	ENSPSMG00000012039	ENSPSMG00000012047 #14	RIDA (ENSPSMG00000012066) #15	POP1 (ENSPSMG00000012091) #16	NIPAL2 (ENSPSMG00000012103) #18	KCNS2 (ENSPSMG00000012114) #19	STK3 (ENSPSMG00000012165) #20	OSR2 (ENSPSMG00000012178) #22	VPS13B (ENSPSMG00000012326) #24	ENSPSMG00000012355	RGS22 (ENSPSMG00000012424)	FBXO43 (ENSPSMG00000012438)	POLR2K (ENSPSMG00000012451)	SPAG1 (ENSPSMG00000012471)	RNF19A (ENSPSMG00000012490)	ANKRD46 (ENSPSMG00000012518)	SNX31 (ENSPSMG00000012537)	PABPC1 (ENSPSMG00000012609)	ENSPSMG00000012736	ENSPSMG00000012795	ENSPSMG00000012798	ENSPSMG00000012800	GRHL2 (ENSPSMG00000012819)
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b
Tree shrew	MODERN SPECIES	1450																OSR2 (ENSTBEG00000001576) #22	VPS13B (ENSTBEG00000002114) #24	ENSTBEG00000005064	ENSTBEG00000005095
Glires	ANCESTRAL SPECIES	20	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b
Lagomorpha	ANCESTRAL SPECIES	20	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a.d #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.s.a ##13	ENSGT00390000012138.a.b.s.b ##13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00940000164643	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Rabbit	MODERN SPECIES	14	ENSOCUG00000002662	CPQ (ENSOCUG00000014385)	TSPYL5 (ENSOCUG00000009903) #8	ENSOCUG00000031706	MTDH (ENSOCUG00000011400) #9	LAPTM4B (ENSOCUG00000013689) #10	MATN2 (ENSOCUG00000017377) #12	RPL30 (ENSOCUG00000017386) ##13	ENSOCUG00000017391 #14	ENSOCUG00000035058 #15	POP1 (ENSOCUG00000017400) #16	ENSOCUG00000017407 #18	KCNS2 (ENSOCUG00000004540) #19	STK3 (ENSOCUG00000004545) #20	ENSOCUG00000011503	OSR2 (ENSOCUG00000022383) #22	VPS13B (ENSOCUG00000008725) #24	ENSOCUG00000039216 #25	RGS22 (ENSOCUG00000031074)	FBXO43 (ENSOCUG00000008776)	ENSOCUG00000029376	SPAG1 (ENSOCUG00000001879)	RNF19A (ENSOCUG00000001892)	ANKRD46 (ENSOCUG00000009778)	SNX31 (ENSOCUG00000009781)	ENSOCUG00000004354	YWHAZ (ENSOCUG00000000734)	ZNF706 (ENSOCUG00000008661)	GRHL2 (ENSOCUG00000004750)	NCALD (ENSOCUG00000009431)	RRM2B (ENSOCUG00000008545)
Pika	MODERN SPECIES	8865																OSR2 (ENSOPRG00000005325) #22
Rodentia	ANCESTRAL SPECIES	19	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.s.a.b ##13	ENSGT00390000012138.a.a.j.b ##13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b
Eurasian red squirrel	MODERN SPECIES		TSPYL5 (ENSSVLG00005002014) #8	ENSSVLG00005002034 #9	ENSSVLG00005002083	ENSSVLG00005002092	LAPTM4B (ENSSVLG00005002108) #10	MATN2 (ENSSVLG00005002132) #12	ENSSVLG00005002166 ##13	ENSSVLG00005002192	ENSSVLG00005002202 #14	ERICH5 (ENSSVLG00005002215)	ENSSVLG00005002234 #15	POP1 (ENSSVLG00005002246) #16	NIPAL2 (ENSSVLG00005002294) #18	KCNS2 (ENSSVLG00005002345) #19	STK3 (ENSSVLG00005002365) #20	OSR2 (ENSSVLG00005002406) #22	VPS13B (ENSSVLG00005002505) #24	ENSSVLG00005002791	ENSSVLG00005002798	ENSSVLG00005002811	ENSSVLG00005002823	ENSSVLG00005002835 #25	RGS22 (ENSSVLG00005002884)	FBXO43 (ENSSVLG00005003116)	ENSSVLG00005003136	ENSSVLG00005003160	ENSSVLG00005003189	RNF19A (ENSSVLG00005003226)	ENSSVLG00005003243	SNX31 (ENSSVLG00005003271)	PABPC1 (ENSSVLG00005003305)
Marmotini	ANCESTRAL SPECIES	10	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.a.j.b ##13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.b
Alpin marmot	MODERN SPECIES	18						MTDH (ENSMMMG00000015702) #9	ENSMMMG00000015749	LAPTM4B (ENSMMMG00000015757) #10	MATN2 (ENSMMMG00000015779) #12	ENSMMMG00000015872 ##13	RIDA (ENSMMMG00000015899) #15	POP1 (ENSMMMG00000015905) #16	NIPAL2 (ENSMMMG00000015942) #18	KCNS2 (ENSMMMG00000015951) #19	STK3 (ENSMMMG00000015954) #20	OSR2 (ENSMMMG00000015987) #22	VPS13B (ENSMMMG00000016018) #24	COX6C (ENSMMMG00000016076) #25	RGS22 (ENSMMMG00000016089)	FBXO43 (ENSMMMG00000016105)	ENSMMMG00000016111	ENSMMMG00000016116	ENSMMMG00000016121	RNF19A (ENSMMMG00000016129)	ANKRD46 (ENSMMMG00000016148)	SNX31 (ENSMMMG00000016151)	PABPC1 (ENSMMMG00000016183)	ENSMMMG00000016188	GRHL2 (ENSMMMG00000016231)	NCALD (ENSMMMG00000016254)	RRM2B (ENSMMMG00000016263)
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.a.j.b ##13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.a.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Arctic ground squirrel	MODERN SPECIES	1	MTERF3 (ENSUPAG00010013471)	PTDSS1 (ENSUPAG00010013461)	SDC2 (ENSUPAG00010013453)	CPQ (ENSUPAG00010013448)	TSPYL5 (ENSUPAG00010013417) #8	MTDH (ENSUPAG00010013325) #9	LAPTM4B (ENSUPAG00010013282) #10	MATN2 (ENSUPAG00010013247) #12	ENSUPAG00010013235 ##13	ERICH5 (ENSUPAG00010013227)	RIDA (ENSUPAG00010013221) #15	POP1 (ENSUPAG00010013195) #16	NIPAL2 (ENSUPAG00010013172) #18	KCNS2 (ENSUPAG00010013167) #19	STK3 (ENSUPAG00010013132) #20	OSR2 (ENSUPAG00010013120) #22	ENSUPAG00010013114	ENSUPAG00010013107	ENSUPAG00010013097	ENSUPAG00010013083	VPS13B (ENSUPAG00010012963) #24	ENSUPAG00010012936 #25	RGS22 (ENSUPAG00010012884)	FBXO43 (ENSUPAG00010012872)	ENSUPAG00010012856	ENSUPAG00010012851	ENSUPAG00010012820	RNF19A (ENSUPAG00010012809)	ANKRD46 (ENSUPAG00010012805)	ENSUPAG00010012795	SNX31 (ENSUPAG00010012764)
Squirrel	MODERN SPECIES	70	PTDSS1 (ENSSTOG00000008027)	SDC2 (ENSSTOG00000008050)	CPQ (ENSSTOG00000012223)	TSPYL5 (ENSSTOG00000005767) #8	MTDH (ENSSTOG00000005068) #9	LAPTM4B (ENSSTOG00000022846) #10	MATN2 (ENSSTOG00000011440) #12	ENSSTOG00000030813 ##13	ERICH5 (ENSSTOG00000011450)	ENSSTOG00000011452 #15	POP1 (ENSSTOG00000011455) #16	NIPAL2 (ENSSTOG00000000646) #18	KCNS2 (ENSSTOG00000024646) #19	STK3 (ENSSTOG00000000651) #20	ENSSTOG00000029048	OSR2 (ENSSTOG00000021263) #22	ENSSTOG00000027003	VPS13B (ENSSTOG00000015651) #24	COX6C (ENSSTOG00000015672) #25	RGS22 (ENSSTOG00000015674)	FBXO43 (ENSSTOG00000027663)	POLR2K (ENSSTOG00000006123)	SPAG1 (ENSSTOG00000006135)	RNF19A (ENSSTOG00000006177)	ENSSTOG00000024280	SNX31 (ENSSTOG00000016392)	PABPC1 (ENSSTOG00000016395)	ENSSTOG00000034817	ENSSTOG00000023864	ZNF706 (ENSSTOG00000022580)	ENSSTOG00000031885
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094.hb	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT01100000263484.B.b.b	ENSGT00390000007776	ENSGT00390000011748
Naked mole-rat female	MODERN SPECIES	13	ENSHGLG00000021132	ENSHGLG00000050956	ENSHGLG00000008700 #9	ENSHGLG00000041488 #10	MATN2 (ENSHGLG00000010275) #12	ENSHGLG00000010022	ENSHGLG00000033730	RPL30 (ENSHGLG00000034047) #13	ERICH5 (ENSHGLG00000005192)	HRSP12 (ENSHGLG00000035354) #15	POP1 (ENSHGLG00000006029) #16	ENSHGLG00000047572	NIPAL2 (ENSHGLG00000040382) #18	KCNS2 (ENSHGLG00000039128) #19	STK3 (ENSHGLG00000008473) #20	OSR2 (ENSHGLG00000011216) #22	VPS13B (ENSHGLG00000012549) #24	COX6C (ENSHGLG00000017404) #25	RGS22 (ENSHGLG00000018462)	ENSHGLG00000018671	FBXO43 (ENSHGLG00000017578)	ENSHGLG00000004285	SPAG1 (ENSHGLG00000004354)	RNF19A (ENSHGLG00000004447)	ENSHGLG00000004487	ANKRD46 (ENSHGLG00000004526)	SNX31 (ENSHGLG00000005963)	PABPC1 (ENSHGLG00000007713)	ENSHGLG00000009040	ENSHGLG00000033770	ENSHGLG00000047813
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094.hb	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT01100000263484.B.b.b	ENSGT00390000007776	ENSGT00390000011748
Guinea pig	MODERN SPECIES		GDF6 (ENSCPOG00000010549)	UQCRB (ENSCPOG00000037355)	MTERF3 (ENSCPOG00000003487)	PTDSS1 (ENSCPOG00000003491)	SDC2 (ENSCPOG00000036427)	CPQ (ENSCPOG00000007260)	MTDH (ENSCPOG00000037219) #9	LAPTM4B (ENSCPOG00000020368) #10	MATN2 (ENSCPOG00000003062) #12	RPL30 (ENSCPOG00000030315) #13	RIDA (ENSCPOG00000036991) #15	POP1 (ENSCPOG00000002901) #16	NIPAL2 (ENSCPOG00000032021) #18	KCNS2 (ENSCPOG00000026156) #19	STK3 (ENSCPOG00000010689) #20	OSR2 (ENSCPOG00000020572) #22	ENSCPOG00000019380	VPS13B (ENSCPOG00000014447) #24	COX6C (ENSCPOG00000014456) #25	RGS22 (ENSCPOG00000002153)	FBXO43 (ENSCPOG00000002160)	POLR2K (ENSCPOG00000036717)	SPAG1 (ENSCPOG00000002162)	RNF19A (ENSCPOG00000007313)	ANKRD46 (ENSCPOG00000032374)	SNX31 (ENSCPOG00000012914)	PABPC1 (ENSCPOG00000012917)	YWHAZ (ENSCPOG00000040522)	ZNF706 (ENSCPOG00000037379)	TRHR (ENSCPOG00000011339)	NUDCD1 (ENSCPOG00000036228)
Hystricomorpha_b	ANCESTRAL SPECIES	25	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094.hb	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT01100000263484.B.b.b	ENSGT00390000007776	ENSGT00390000011748
Long-tailed chinchilla	MODERN SPECIES	124	PTDSS1 (ENSCLAG00000005033)	SDC2 (ENSCLAG00000006071)	CPQ (ENSCLAG00000007372)	TSPYL5 (ENSCLAG00000007761) #8	ENSCLAG00000007799	MTDH (ENSCLAG00000007884) #9	LAPTM4B (ENSCLAG00000005642) #10	MATN2 (ENSCLAG00000005911) #12	RPL30 (ENSCLAG00000006288) #13	ERICH5 (ENSCLAG00000006781)	RIDA (ENSCLAG00000006938) #15	POP1 (ENSCLAG00000007208) #16	NIPAL2 (ENSCLAG00000008008) #18	KCNS2 (ENSCLAG00000018060) #19	STK3 (ENSCLAG00000012018) #20	OSR2 (ENSCLAG00000012733) #22	VPS13B (ENSCLAG00000004590) #24	COX6C (ENSCLAG00000004170) #25	RGS22 (ENSCLAG00000004565)	FBXO43 (ENSCLAG00000007471)	POLR2K (ENSCLAG00000010033)	SPAG1 (ENSCLAG00000013379)	RNF19A (ENSCLAG00000015646)	ENSCLAG00000017008	SNX31 (ENSCLAG00000011888)	PABPC1 (ENSCLAG00000009676)	YWHAZ (ENSCLAG00000004303)	ENSCLAG00000005116	ZNF706 (ENSCLAG00000005214)	TRHR (ENSCLAG00000005381)	NUDCD1 (ENSCLAG00000005542)
Degu	MODERN SPECIES	159					ENSODEG00000018842	ENSODEG00000018863	MTDH (ENSODEG00000003805) #9	LAPTM4B (ENSODEG00000003827) #10	MATN2 (ENSODEG00000003867) #12	ENSODEG00000003943 #13	RIDA (ENSODEG00000003956) #15	POP1 (ENSODEG00000003984) #16	NIPAL2 (ENSODEG00000004019) #18	KCNS2 (ENSODEG00000004047) #19	STK3 (ENSODEG00000004108) #20	OSR2 (ENSODEG00000004176) #22	ENSODEG00000004192	ENSODEG00000004228 #24	ENSODEG00000004243 #25	RGS22 (ENSODEG00000004270)	ENSODEG00000004346	ENSODEG00000004358	SPAG1 (ENSODEG00000004385)	ENSODEG00000019080	ENSODEG00000003147	SNX31 (ENSODEG00000003171)	ENSODEG00000003229	YWHAZ (ENSODEG00000003295)	ENSODEG00000003308	ENSODEG00000003317	ENSODEG00000003325
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Kangaroo rat	MODERN SPECIES	336	Ptdss1 (ENSDORG00000010478)	Sdc2 (ENSDORG00000023682)	ENSDORG00000024009	Cpq (ENSDORG00000015406)	Tspyl5 (ENSDORG00000015407) #8	Mtdh (ENSDORG00000004411) #9	Laptm4b (ENSDORG00000026371) #10	Matn2 (ENSDORG00000001226) #12	ENSDORG00000026515 #13	ENSDORG00000012384	Rida (ENSDORG00000015382) #15	Pop1 (ENSDORG00000015384) #16	Nipal2 (ENSDORG00000013257) #18	Kcns2 (ENSDORG00000007088) #19	Stk3 (ENSDORG00000007089) #20	Osr2 (ENSDORG00000011823) #22	Vps13b (ENSDORG00000012357) #24	Cox6c (ENSDORG00000000009) #25	Fbxo43 (ENSDORG00000000697)	Polr2k (ENSDORG00000028386)	Spag1 (ENSDORG00000000699)	Rnf19a (ENSDORG00000000701)	Ankrd46 (ENSDORG00000012247)	Snx31 (ENSDORG00000014406)	Pabpc1 (ENSDORG00000013935)	Ywhaz (ENSDORG00000011156)	Zfp706 (ENSDORG00000015819)	Grhl2 (ENSDORG00000007051)	Ncald (ENSDORG00000025691)	Rrm2b (ENSDORG00000007056)	Ubr5 (ENSDORG00000007058)
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Lesser Egyptian jerboa	MODERN SPECIES	96				Mtdh (ENSJJAG00000017818) #9	ENSJJAG00000014247 #10	ENSJJAG00000012241	Matn2 (ENSJJAG00000022386) #12	ENSJJAG00000021232 ##13	ENSJJAG00000020177	Pop1 (ENSJJAG00000013325) #16	ENSJJAG00000010693	Nipal2 (ENSJJAG00000000450) #18	Kcns2 (ENSJJAG00000021215) #19	Stk3 (ENSJJAG00000019016) #20	ENSJJAG00000012640	Osr2 (ENSJJAG00000012336) #22	Vps13b (ENSJJAG00000017780) #24	ENSJJAG00000019740 #25	Rgs22 (ENSJJAG00000011143)	Fbxo43 (ENSJJAG00000007559)	ENSJJAG00000000271	Spag1 (ENSJJAG00000014363)	Rnf19a (ENSJJAG00000012255)	Ankrd46 (ENSJJAG00000001029)	Snx31 (ENSJJAG00000018446)	ENSJJAG00000015918	ENSJJAG00000010886	ENSJJAG00000002258	Zfp706 (ENSJJAG00000000146)	Grhl2 (ENSJJAG00000021484)	Ncald (ENSJJAG00000017643)
Muroidea	ANCESTRAL SPECIES	14	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Upper Galilee mountains blind mole rat	MODERN SPECIES	760			Cpq (ENSNGAG00000021825)	Tspyl5 (ENSNGAG00000013439) #8	ENSNGAG00000020936	Mtdh (ENSNGAG00000011464) #9	Laptm4b (ENSNGAG00000004954) #10	Matn2 (ENSNGAG00000013927) #12	ENSNGAG00000015276 #13	Erich5 (ENSNGAG00000013838)	Rida (ENSNGAG00000024030) #15	Pop1 (ENSNGAG00000001582) #16	Nipal2 (ENSNGAG00000021423) #18	Kcns2 (ENSNGAG00000004621) #19	ENSNGAG00000021406 #20	Osr2 (ENSNGAG00000022766) #22	Vps13b (ENSNGAG00000013908) #24	Cox6c (ENSNGAG00000020308) #25	Rgs22 (ENSNGAG00000022745)	Fbxo43 (ENSNGAG00000015827)	Polr2k (ENSNGAG00000020950)	Spag1 (ENSNGAG00000023969)	Rnf19a (ENSNGAG00000006667)	Ankrd46 (ENSNGAG00000018485)	Snx31 (ENSNGAG00000021124)	ENSNGAG00000000996	ENSNGAG00000006289	ENSNGAG00000010111	Zfp706 (ENSNGAG00000012379)
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Northern American deer mouse	MODERN SPECIES	12	ENSPEMG00000029126	Sdc2 (ENSPEMG00000001814)	Cpq (ENSPEMG00000007404)	Tspyl5 (ENSPEMG00000005131) #8	Mtdh (ENSPEMG00000021866) #9	Laptm4b (ENSPEMG00000021641) #10	ENSPEMG00000031351	Matn2 (ENSPEMG00000022322) #12	ENSPEMG00000022132 #13	Erich5 (ENSPEMG00000021961)	Rida (ENSPEMG00000021792) #15	Pop1 (ENSPEMG00000023633) #16	Nipal2 (ENSPEMG00000022571) #18	Kcns2 (ENSPEMG00000030882) #19	ENSPEMG00000022099 #20	Osr2 (ENSPEMG00000023942) #22	ENSPEMG00000022768	Vps13b (ENSPEMG00000021894) #24	ENSPEMG00000023434 #25	Rgs22 (ENSPEMG00000001987)	Fbxo43 (ENSPEMG00000009599)	ENSPEMG00000012015	Spag1 (ENSPEMG00000010823)	Rnf19a (ENSPEMG00000010959)	ENSPEMG00000026775	Ankrd46 (ENSPEMG00000028516)	Snx31 (ENSPEMG00000012435)	ENSPEMG00000014998	ENSPEMG00000021714	Zfp706 (ENSPEMG00000027958)	Grhl2 (ENSPEMG00000010802)
Prairie vole	MODERN SPECIES	112	Mterf3 (ENSMOCG00000009078)	Ptdss1 (ENSMOCG00000015040)	Sdc2 (ENSMOCG00000012681)	Cpq (ENSMOCG00000017639)	Tspyl5 (ENSMOCG00000021860) #8	Mtdh (ENSMOCG00000008389) #9	Laptm4b (ENSMOCG00000019392) #10	Matn2 (ENSMOCG00000002507) #12	Rpl30 (ENSMOCG00000006624) #13	Erich5 (ENSMOCG00000015882)	Rida (ENSMOCG00000014887) #15	Pop1 (ENSMOCG00000006356) #16	Nipal2 (ENSMOCG00000019111) #18	Kcns2 (ENSMOCG00000001182) #19	Stk3 (ENSMOCG00000012460) #20	Osr2 (ENSMOCG00000003261) #22	Vps13b (ENSMOCG00000019739) #24	Cox6c (ENSMOCG00000021318) #25	Rgs22 (ENSMOCG00000008860)	Fbxo43 (ENSMOCG00000019801)	Polr2k (ENSMOCG00000009880)	Spag1 (ENSMOCG00000003182)	Rnf19a (ENSMOCG00000003595)	Ankrd46 (ENSMOCG00000009913)	Snx31 (ENSMOCG00000009981)	ENSMOCG00000018191	ENSMOCG00000006605	Zfp706 (ENSMOCG00000008648)	Grhl2 (ENSMOCG00000001176)	Ncald (ENSMOCG00000017199)	Rrm2b (ENSMOCG00000004169)
Cricetinae	ANCESTRAL SPECIES	38	ENSGT00390000012916.t	ENSGT00390000005801	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.a.b.b	ENSGT00900000143156.b	ENSGT01090000260040.a.a.b	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Golden Hamster	MODERN SPECIES	651	Sdc2 (ENSMAUG00000018116)	ENSMAUG00000006096	Cpq (ENSMAUG00000010428)	Tspyl5 (ENSMAUG00000007134) #8	ENSMAUG00000002158	Mtdh (ENSMAUG00000001085) #9	Laptm4b (ENSMAUG00000014122) #10	Matn2 (ENSMAUG00000000454) #12	Rpl30 (ENSMAUG00000006886) #13	Rida (ENSMAUG00000000274) #15	Pop1 (ENSMAUG00000017537) #16	ENSMAUG00000016175	Nipal2 (ENSMAUG00000012882) #18	Kcns2 (ENSMAUG00000016680) #19	Stk3 (ENSMAUG00000016665) #20	Osr2 (ENSMAUG00000010756) #22	Vps13b (ENSMAUG00000013877) #24	Rgs22 (ENSMAUG00000005717)	Fbxo43 (ENSMAUG00000011238)	Polr2k (ENSMAUG00000010288)	Spag1 (ENSMAUG00000003740)	Rnf19a (ENSMAUG00000010432)	Ankrd46 (ENSMAUG00000012258)	Snx31 (ENSMAUG00000014120)	ENSMAUG00000003523	ENSMAUG00000008936	Ywhaz (ENSMAUG00000001602)	Zfp706 (ENSMAUG00000000628)	ENSMAUG00000000279	ENSMAUG00000005244	Ncald (ENSMAUG00000000793)
Chinese hamster chok1gshd	MODERN SPECIES	207	ENSCGRG00001022919	Mterf3 (ENSCGRG00001020186)	PTDSS1 (ENSCGRG00001017439)	Sdc2 (ENSCGRG00001015958)	ENSCGRG00001013803	Tspyl5 (ENSCGRG00001012646) #8	Mtdh (ENSCGRG00001010894) #9	Laptm4b (ENSCGRG00001006505) #10	Matn2 (ENSCGRG00001022796) #12	Rpl30 (ENSCGRG00001020021) #13	Rida (ENSCGRG00001019905) #15	Pop1 (ENSCGRG00001017308) #16	Nipal2 (ENSCGRG00001015512) #18	Kcns2 (ENSCGRG00001014130) #19	Stk3 (ENSCGRG00001014280) #20	Osr2 (ENSCGRG00001011416) #22	Vps13b (ENSCGRG00001019154) #24	Cox6c (ENSCGRG00001001774) #25	Rgs22 (ENSCGRG00001023210)	Fbxo43 (ENSCGRG00001022414)	Spag1 (ENSCGRG00001013037)	Rnf19a (ENSCGRG00001012317)	Ankrd46 (ENSCGRG00001011445)	Snx31 (ENSCGRG00001007695)	ENSCGRG00001022067	ENSCGRG00001015235	ENSCGRG00001014131	Zfp706 (ENSCGRG00001011764)	Grhl2 (ENSCGRG00001011532)	Ncald (ENSCGRG00001004067)	ENSCGRG00001002761
Murinae	ANCESTRAL SPECIES	10	ENSGT00530000063576.B	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.b	ENSGT01090000260040.a.a.a.r	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862	ENSGT00390000013305.a.b
Rat	MODERN SPECIES	17	Sdc2 (ENSRNOG00000004936)	Cpq (ENSRNOG00000005931)	Tspyl5 (ENSRNOG00000006278) #8	RGD1562404 (ENSRNOG00000014169)	ENSRNOG00000066306	Mtdh (ENSRNOG00000006870) #9	ENSRNOG00000068626	Laptm4b (ENSRNOG00000006766) #10	Matn2 (ENSRNOG00000006060) #12	Erich5 (ENSRNOG00000005956)	Rida (ENSRNOG00000005437) #15	Pop1 (ENSRNOG00000005243) #16	Nipal2 (ENSRNOG00000005190) #18	Kcns2 (ENSRNOG00000066111) #19	Stk3 (ENSRNOG00000011278) #20	Osr2 (ENSRNOG00000011136) #22	Vps13b (ENSRNOG00000066252) #24	Cox6c (ENSRNOG00000010807)	RGD1565056 (ENSRNOG00000026873)	Rgs22 (ENSRNOG00000025551)	ENSRNOG00000063604	Fbxo43 (ENSRNOG00000010459)	Polr2k (ENSRNOG00000010408)	Spag1 (ENSRNOG00000010078)	ENSRNOG00000064780	Rnf19a (ENSRNOG00000009658)	Ankrd46 (ENSRNOG00000025504)	Snx31 (ENSRNOG00000025501)	Pabpc1 (ENSRNOG00000008639)	LOC362901 (ENSRNOG00000031383)	Ywhaz (ENSRNOG00000008195)
Mus	ANCESTRAL SPECIES	11	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.a.j.b ##13	ENSGT00700000106136	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.b	ENSGT01090000260040.a.a.a.r	ENSGT00860000135649	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Shrew mouse	MODERN SPECIES	8	MGP_PahariEiJ_G0019724	Sdc2 (MGP_PahariEiJ_G0019725)	Cpq (MGP_PahariEiJ_G0019726)	Tspyl5 (MGP_PahariEiJ_G0019727) #8	Mtdh (MGP_PahariEiJ_G0019728) #9	Laptm4b (MGP_PahariEiJ_G0019729) #10	Matn2 (MGP_PahariEiJ_G0019730) #12	MGP_PahariEiJ_G0019731	Rpl30 (MGP_PahariEiJ_G0019732) #13	Erich5 (MGP_PahariEiJ_G0019733)	Rida (MGP_PahariEiJ_G0019734) #15	Pop1 (MGP_PahariEiJ_G0019735) #16	Nipal2 (MGP_PahariEiJ_G0019736) #18	Kcns2 (MGP_PahariEiJ_G0019737) #19	Stk3 (MGP_PahariEiJ_G0019738) #20	Osr2 (MGP_PahariEiJ_G0019739) #22	Vps13b (MGP_PahariEiJ_G0019740) #24	Cox6c (MGP_PahariEiJ_G0019741) #25	Rgs22 (MGP_PahariEiJ_G0019742)	Fbxo43 (MGP_PahariEiJ_G0019743)	MGP_PahariEiJ_G0019744	Spag1 (MGP_PahariEiJ_G0019745)	Rnf19a (MGP_PahariEiJ_G0019746)	Ankrd46 (MGP_PahariEiJ_G0019747)	Snx31 (MGP_PahariEiJ_G0019748)	Pabpc1 (MGP_PahariEiJ_G0019749)	MGP_PahariEiJ_G0019750	MGP_PahariEiJ_G0019751	Zfp706 (MGP_PahariEiJ_G0019752)	Grhl2 (MGP_PahariEiJ_G0019753)	Ncald (MGP_PahariEiJ_G0019754)
Mus_A	ANCESTRAL SPECIES	13	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.k #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.a.j.b ##13	ENSGT00700000106136	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b.o.a.a	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.b	ENSGT01090000260040.a.a.a.r	ENSGT00860000135649	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Ryukyu mouse	MODERN SPECIES	6	Sema5a (MGP_CAROLIEiJ_G0019715)	Sdc2 (MGP_CAROLIEiJ_G0019716)	Cpq (MGP_CAROLIEiJ_G0019717)	Tspyl5 (MGP_CAROLIEiJ_G0019718) #8	Mtdh (MGP_CAROLIEiJ_G0019719) #9	Laptm4b (MGP_CAROLIEiJ_G0019720) #10	Matn2 (MGP_CAROLIEiJ_G0019721) #12	MGP_CAROLIEiJ_G0019722	Rpl30 (MGP_CAROLIEiJ_G0019723) #13	Erich5 (MGP_CAROLIEiJ_G0019724)	Rida (MGP_CAROLIEiJ_G0019725) #15	Pop1 (MGP_CAROLIEiJ_G0019726) #16	Nipal2 (MGP_CAROLIEiJ_G0019727) #18	Kcns2 (MGP_CAROLIEiJ_G0019728) #19	Stk3 (MGP_CAROLIEiJ_G0019729) #20	Osr2 (MGP_CAROLIEiJ_G0019730) #22	Vps13b (MGP_CAROLIEiJ_G0019731) #24	Cox6c (MGP_CAROLIEiJ_G0019732) #25	Rgs22 (MGP_CAROLIEiJ_G0019733)	Fbxo43 (MGP_CAROLIEiJ_G0019734)	Polr2k (MGP_CAROLIEiJ_G0019735)	Spag1 (MGP_CAROLIEiJ_G0019736)	Rnf19a (MGP_CAROLIEiJ_G0019737)	Ankrd46 (MGP_CAROLIEiJ_G0019738)	Snx31 (MGP_CAROLIEiJ_G0019739)	Pabpc1 (MGP_CAROLIEiJ_G0019740)	Ywhaz (MGP_CAROLIEiJ_G0019741)	MGP_CAROLIEiJ_G0019742	Zfp706 (MGP_CAROLIEiJ_G0019743)	Grhl2 (MGP_CAROLIEiJ_G0019744)	Ncald (MGP_CAROLIEiJ_G0019745)
Mus_B	ANCESTRAL SPECIES	12	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.k #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.a.j.b ##13	ENSGT00700000106136	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b.o.a.a	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.b	ENSGT01090000260040.a.a.a.r	ENSGT00860000135649	ENSGT00390000003465.b.b	ENSGT00940000155788	ENSGT00940000158862
Mouse	MODERN SPECIES	6	Sema5a (ENSMUSG00000022231)	Sdc2 (ENSMUSG00000022261)	Cpq (ENSMUSG00000039007)	Tspyl5 (ENSMUSG00000038984) #8	Mtdh (ENSMUSG00000022255) #9	Laptm4b (ENSMUSG00000022257) #10	Matn2 (ENSMUSG00000022324) #12	9430069I07Rik (ENSMUSG00000094447)	Rpl30 (ENSMUSG00000058600) #13	Erich5 (ENSMUSG00000044726)	Rida (ENSMUSG00000022323) #15	Pop1 (ENSMUSG00000022325) #16	Nipal2 (ENSMUSG00000038879) #18	Kcns2 (ENSMUSG00000050963) #19	Stk3 (ENSMUSG00000022329) #20	Osr2 (ENSMUSG00000022330) #22	Vps13b (ENSMUSG00000037646) #24	Cox6c (ENSMUSG00000014313) #25	Rgs22 (ENSMUSG00000037627)	Fbxo43 (ENSMUSG00000048230)	Polr2k (ENSMUSG00000045996)	Spag1 (ENSMUSG00000037617)	Rnf19a (ENSMUSG00000022280)	Ankrd46 (ENSMUSG00000048307)	Snx31 (ENSMUSG00000013611)	Pabpc1 (ENSMUSG00000022283)	Ywhaz (ENSMUSG00000022285)	Zfp706 (ENSMUSG00000062397)	Grhl2 (ENSMUSG00000022286)	Ncald (ENSMUSG00000051359)	Rrm2b (ENSMUSG00000022292)
Mus_C	ANCESTRAL SPECIES	28	ENSGT00940000158036	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110	ENSGT00940000162862 #8	ENSGT00940000154181.a #9	ENSGT00940000153446.a.a.k #10	ENSGT00940000158008 #12	ENSGT00390000012138.a.b.t.ab #13	ENSGT00390000010783	ENSGT00420000029792 #15	ENSGT00390000017478 #16	ENSGT00940000159321 #18	ENSGT00940000160344 #19	ENSGT00940000154984.C #20	ENSGT00940000160530 #22	ENSGT00940000154684 #24	ENSGT00940000162275 #25	ENSGT00500000044936	ENSGT00530000063692.a	ENSGT00390000008918.b.o.a.a	ENSGT00940000164643	ENSGT00940000154697.a.b	ENSGT00940000158703	ENSGT00940000157094	ENSGT00950000183212.A	ENSGT00940000153773.b	ENSGT00510000046985.i.b.a	ENSGT01090000260040.a.a.a.r	ENSGT00860000135649	ENSGT00390000003465.b.b
spretus	MODERN SPECIES	6	Tas2r119 (MGP_SPRETEiJ_G0020610)	Sema5a (MGP_SPRETEiJ_G0020611)	Cpq (MGP_SPRETEiJ_G0020613)	Tspyl5 (MGP_SPRETEiJ_G0020614) #8	Mtdh (MGP_SPRETEiJ_G0020615) #9	Laptm4b (MGP_SPRETEiJ_G0020616) #10	Matn2 (MGP_SPRETEiJ_G0020617) #12	MGP_SPRETEiJ_G0020618	Rpl30 (MGP_SPRETEiJ_G0020619) #13	Erich5 (MGP_SPRETEiJ_G0020620)	Rida (MGP_SPRETEiJ_G0020621) #15	Pop1 (MGP_SPRETEiJ_G0020622) #16	Nipal2 (MGP_SPRETEiJ_G0020623) #18	Kcns2 (MGP_SPRETEiJ_G0020624) #19	Stk3 (MGP_SPRETEiJ_G0020625) #20	Osr2 (MGP_SPRETEiJ_G0020626) #22	Vps13b (MGP_SPRETEiJ_G0020627) #24	Cox6c (MGP_SPRETEiJ_G0020628) #25	Rgs22 (MGP_SPRETEiJ_G0020629)	Fbxo43 (MGP_SPRETEiJ_G0020630)	Polr2k (MGP_SPRETEiJ_G0020631)	Spag1 (MGP_SPRETEiJ_G0020632)	Rnf19a (MGP_SPRETEiJ_G0020633)	Ankrd46 (MGP_SPRETEiJ_G0020634)	Snx31 (MGP_SPRETEiJ_G0020635)	Pabpc1 (MGP_SPRETEiJ_G0020636)	MGP_SPRETEiJ_G0020637	Ywhaz (MGP_SPRETEiJ_G0020638)	MGP_SPRETEiJ_G0020639	Zfp706 (MGP_SPRETEiJ_G0020640)	Grhl2 (MGP_SPRETEiJ_G0020641)
Steppe mouse	MODERN SPECIES	3308	Cpq (ENSMSIG00000016806)	Tspyl5 (ENSMSIG00000016794) #8	ENSMSIG00000016786	Mtdh (ENSMSIG00000016720) #9	ENSMSIG00000016703	Laptm4b (ENSMSIG00000016687) #10	9430069I07Rik (ENSMSIG00000016655)	Matn2 (ENSMSIG00000016562) #12	ENSMSIG00000016533 ##13	Erich5 (ENSMSIG00000016520)	Rida (ENSMSIG00000016480) #15	Pop1 (ENSMSIG00000016402) #16	Nipal2 (ENSMSIG00000016374) #18	Kcns2 (ENSMSIG00000016369) #19	Stk3 (ENSMSIG00000016310) #20	Osr2 (ENSMSIG00000016289) #22	Vps13b (ENSMSIG00000016021) #24	Cox6c (ENSMSIG00000015963) #25	ENSMSIG00000015927	Rgs22 (ENSMSIG00000015850)	Fbxo43 (ENSMSIG00000015840)	ENSMSIG00000015808	Spag1 (ENSMSIG00000015763)	Rnf19a (ENSMSIG00000015703)	ENSMSIG00000015663	Snx31 (ENSMSIG00000015612)	Pabpc1 (ENSMSIG00000015570)	ENSMSIG00000015548	ENSMSIG00000015546	Ywhaz (ENSMSIG00000015504)	ENSMSIG00000015497