Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a #19	ENSGT00390000007560 #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT00390000002253	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a #19	ENSGT00390000007560 #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b	ENSGT00940000161768.A	ENSGT00940000161322
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a.a #19	ENSGT00390000007560.o.b #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00950000182899.B.b #26	ENSGT00940000155339.q #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT01010000226498 #30	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b	ENSGT00940000161768.A
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.a.a.b #17	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a.a #19	ENSGT00390000007560.o.b #20	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00950000182899.B.b #26	ENSGT00940000155339.q #27	ENSGT01100000263991.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT01010000226498 #30	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00950000185370 #7	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197.z #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.a.a.b #17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a.a #19	ENSGT00390000007560.o.b #20	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00950000182899.B.b #26	ENSGT00940000155339.q #27	ENSGT01100000263991.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT01010000226498 #30	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00950000185370 #7	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197.z #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256.c #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.a.a.b #17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a.a #19	ENSGT00390000007560.o.b #20	ENSGT00940000160787.a #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00950000182899.B.b #26	ENSGT00940000155339.q #27	ENSGT01100000263991.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT01010000226498 #30	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00950000185370 #7	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197.z #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256.c #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.a.a.b #17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a.a #19	ENSGT00390000007560.o.b #20	ENSGT00940000160787.a #21	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00950000182899.B.b #26	ENSGT00940000155339.q #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT01010000226498 #30	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.b #31	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Narwhal	MODERN SPECIES	309	ENSMMNG00015016770 #7	PGRMC1 (ENSMMNG00015016800) #8	ENSMMNG00015016817 #9	SLC25A43 (ENSMMNG00015016834) #10	SLC25A5 (ENSMMNG00015016861) #11	STEEP1 (ENSMMNG00015016902) #12	UBE2A (ENSMMNG00015017005) #13	ENSMMNG00015017057 #14	SEPTIN6 (ENSMMNG00015017135) #15	SOWAHD (ENSMMNG00015017238) #16	ENSMMNG00015017247 #17	UPF3B (ENSMMNG00015017288) #18	ENSMMNG00015017331 #19	ENSMMNG00015017340 #20	ENSMMNG00015017371 #21	ZBTB33 (ENSMMNG00015017422) #22	ENSMMNG00015017438 #23	TMEM255A (ENSMMNG00015017476) #24	ATP1B4 (ENSMMNG00015017630) #25	LAMP2 (ENSMMNG00015017731) #26	CUL4B (ENSMMNG00015017840) #27	MCTS1 (ENSMMNG00015018056) #28	C1GALT1C1 (ENSMMNG00015018118) #29	ENSMMNG00015018133 #30	ENSMMNG00015018156 #31	ENSMMNG00015018183 #32	GRIA3 (ENSMMNG00015018223) #33	THOC2 (ENSMMNG00015018310) #34	XIAP (ENSMMNG00015018503) #35	STAG2 (ENSMMNG00015018556) #36	ENSMMNG00015018755 #37
Beluga whale	MODERN SPECIES	68	LONRF3 (ENSDLEG00000019386)	ENSDLEG00000019376 #7	PGRMC1 (ENSDLEG00000019374) #8	ENSDLEG00000019371 #9	SLC25A43 (ENSDLEG00000019365) #10	SLC25A5 (ENSDLEG00000019361) #11	CUNHXorf56 (ENSDLEG00000019347) #12	UBE2A (ENSDLEG00000019338) #13	ENSDLEG00000019334 #14	SEPT6 (ENSDLEG00000019290) #15	SOWAHD (ENSDLEG00000019273) #16	UPF3B (ENSDLEG00000019247) #18	ENSDLEG00000019234 #19	NDUFA1 (ENSDLEG00000019226) #20	ENSDLEG00000019214 #21	ZBTB33 (ENSDLEG00000019202) #22	TMEM255A (ENSDLEG00000019196) #24	ATP1B4 (ENSDLEG00000019104) #25	LAMP2 (ENSDLEG00000019062) #26	ENSDLEG00000017607 #27	MCTS1 (ENSDLEG00000017374) #28	ENSDLEG00000017357 #30	ENSDLEG00000017342 #31	GRIA3 (ENSDLEG00000017227) #33	THOC2 (ENSDLEG00000017048) #34	XIAP (ENSDLEG00000017013) #35	STAG2 (ENSDLEG00000016908) #36	ENSDLEG00000016889	SH2D1A (ENSDLEG00000016871) #37	TENM1 (ENSDLEG00000016717)
Vaquita	MODERN SPECIES	34	LONRF3 (ENSPSNG00000015386)	ENSPSNG00000015675 #7	PGRMC1 (ENSPSNG00000015744) #8	ENSPSNG00000015796 #9	SLC25A43 (ENSPSNG00000015832) #10	SLC25A5 (ENSPSNG00000015917) #11	STEEP1 (ENSPSNG00000015983) #12	UBE2A (ENSPSNG00000016113) #13	NKRF (ENSPSNG00000016268) #14	SEPTIN6 (ENSPSNG00000016410) #15	SOWAHD (ENSPSNG00000016554) #16	UPF3B (ENSPSNG00000016634) #18	ENSPSNG00000016705 #19	NDUFA1 (ENSPSNG00000016731) #20	ENSPSNG00000016789 #21	ZBTB33 (ENSPSNG00000016921) #22	TMEM255A (ENSPSNG00000016965) #24	ATP1B4 (ENSPSNG00000017092) #25	LAMP2 (ENSPSNG00000017367) #26	ENSPSNG00000017563 #27	ENSPSNG00000018501	MCTS1 (ENSPSNG00000018563) #28	C1GALT1C1 (ENSPSNG00000018655) #29	ENSPSNG00000018684 #30	ENSPSNG00000018728	ENSPSNG00000018741 ##31	GRIA3 (ENSPSNG00000018786) #33	THOC2 (ENSPSNG00000018864) #34	XIAP (ENSPSNG00000019138) #35	STAG2 (ENSPSNG00000019195) #36	SH2D1A (ENSPSNG00000019428) #37
Dolphin	MODERN SPECIES	4598																ZBTB33 (ENSTTRG00000005023) #22	TMEM255A (ENSTTRG00000005036) #24
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	13	PGRMC1 (ENSPCTG00005021150) #8	ENSPCTG00005021156 #9	SLC25A43 (ENSPCTG00005021181) #10	SLC25A5 (ENSPCTG00005021197) #11	C21HXorf56 (ENSPCTG00005021213) #12	UBE2A (ENSPCTG00005021228) #13	NKRF (ENSPCTG00005021286) #14	SEPTIN6 (ENSPCTG00005021329) #15	SOWAHD (ENSPCTG00005021365) #16	GMPR2 (ENSPCTG00005021379) ##17	RPL39 (ENSPCTG00005021386) ##17	UPF3B (ENSPCTG00005021412) #18	RNF113A (ENSPCTG00005021437) #19	NDUFA1 (ENSPCTG00005021450) ##20	ENSPCTG00005021469 #22	ENSPCTG00005021481 #22	ENSPCTG00005021487 #23	TMEM255A (ENSPCTG00005021498) #24	ATP1B4 (ENSPCTG00005021520) #25	LAMP2 (ENSPCTG00005021587) #26	CUL4B (ENSPCTG00005021625) #27	ENSPCTG00005021706	MCTS1 (ENSPCTG00005021726) #28	C1GALT1C1 (ENSPCTG00005021756) #29	ENSPCTG00005021761 #30	ENSPCTG00005021769 ##31	GRIA3 (ENSPCTG00005021790) #33	THOC2 (ENSPCTG00005021828) #34	XIAP (ENSPCTG00005021934) #35	ENSPCTG00005021944	STAG2 (ENSPCTG00005021957) #36
Sperm whale	MODERN SPECIES	13	LONRF3 (ENSPCTG00005021026)	PGRMC1 (ENSPCTG00005021150) #8	ENSPCTG00005021156 #9	SLC25A43 (ENSPCTG00005021181) #10	SLC25A5 (ENSPCTG00005021197) #11	C21HXorf56 (ENSPCTG00005021213) #12	UBE2A (ENSPCTG00005021228) #13	NKRF (ENSPCTG00005021286) #14	SEPTIN6 (ENSPCTG00005021329) #15	SOWAHD (ENSPCTG00005021365) #16	GMPR2 (ENSPCTG00005021379) ##17	RPL39 (ENSPCTG00005021386) ##17	UPF3B (ENSPCTG00005021412) #18	RNF113A (ENSPCTG00005021437) #19	NDUFA1 (ENSPCTG00005021450) ##20	ENSPCTG00005021469 #22	ENSPCTG00005021481 #22	ENSPCTG00005021487 #23	TMEM255A (ENSPCTG00005021498) #24	ATP1B4 (ENSPCTG00005021520) #25	LAMP2 (ENSPCTG00005021587) #26	CUL4B (ENSPCTG00005021625) #27	ENSPCTG00005021706	MCTS1 (ENSPCTG00005021726) #28	C1GALT1C1 (ENSPCTG00005021756) #29	ENSPCTG00005021761 #30	ENSPCTG00005021769 ##31	GRIA3 (ENSPCTG00005021790) #33	THOC2 (ENSPCTG00005021828) #34	XIAP (ENSPCTG00005021934) #35	ENSPCTG00005021944
Blue whale	MODERN SPECIES	40	ENSBMSG00010021313 #7	PGRMC1 (ENSBMSG00010021322) #8	ENSBMSG00010021339 #9	SLC25A43 (ENSBMSG00010021353) #10	SLC25A5 (ENSBMSG00010021362) #11	UBE2A (ENSBMSG00010021375) #13	NKRF (ENSBMSG00010021402) #14	SEPTIN6 (ENSBMSG00010021435) #15	SOWAHD (ENSBMSG00010021486) #16	ENSBMSG00010021497 ##17	UPF3B (ENSBMSG00010021508) #18	ENSBMSG00010021519 #19	ENSBMSG00010021521 #20	ENSBMSG00010021529	NKAP (ENSBMSG00010021536) #21	ZBTB33 (ENSBMSG00010021554) #22	TMEM255A (ENSBMSG00010021570) #24	ATP1B4 (ENSBMSG00010016771) #25	LAMP2 (ENSBMSG00010016949) #26	CUL4B (ENSBMSG00010017007) #27	ENSBMSG00010017101	MCTS1 (ENSBMSG00010017130) #28	C1GALT1C1 (ENSBMSG00010017176) #29	ENSBMSG00010017184 #30	ENSBMSG00010017208	GRIA3 (ENSBMSG00010017249) #33	THOC2 (ENSBMSG00010017313) #34	XIAP (ENSBMSG00010017439) #35	ENSBMSG00010017462	ENSBMSG00010017479	STAG2 (ENSBMSG00010017507) #36
Pecora	ANCESTRAL SPECIES	28	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a #19	ENSGT00390000007560 #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b	ENSGT00940000161768.A
Percora_a	ANCESTRAL SPECIES	30	ENSGT00950000185370 #7	ENSGT00940000160619 #8	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00940000155295.o	ENSGT00950000184857	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c	ENSGT00990000204933	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Bovidae	ANCESTRAL SPECIES	29	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00940000155295.o	ENSGT00390000016292.i.a #19	ENSGT00390000007560 #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00940000153883.a.g.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c	ENSGT00990000204933	ENSGT00940000156123.b #33	ENSGT00710000106792.o #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37
Bovinae	ANCESTRAL SPECIES	40	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00940000155295.o	ENSGT00390000016292.i.a #19	ENSGT00390000007560.k #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00940000153883.a.g.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c	ENSGT00940000156123.b #33	ENSGT00710000106792.o #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00390000005569.x.a.a.b	ENSGT00940000155920 #37
Bos	ANCESTRAL SPECIES	39	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00940000155295.o	ENSGT00390000016292.i.a #19	ENSGT00390000007560.k.a #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00940000153883.a.g.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c.b	ENSGT00940000156123.b #33	ENSGT00710000106792.o #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00950000183069.b	ENSGT00940000155920 #37
Bos_b	ANCESTRAL SPECIES	41	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.b.lc ##17	ENSGT00390000017146.a #18	ENSGT00940000155295.o	ENSGT00390000016292.i.a #19	ENSGT00390000007560.k.a #20	ENSGT00390000003444	ENSGT00940000160787 #21	ENSGT00890000139472.h.b	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00940000153883.a.g.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c.b.b	ENSGT00390000002253.c.b.a	ENSGT00940000156123.b #33	ENSGT00710000106792.o #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00950000183069.b	ENSGT00940000155920 #37
Cow	MODERN SPECIES	177	SLC25A43 (ENSBTAG00000001007) #10	SLC25A5 (ENSBTAG00000046037) #11	STEEP1 (ENSBTAG00000047169) #12	UBE2A (ENSBTAG00000045779) #13	NKRF (ENSBTAG00000045744) #14	SEPTIN6 (ENSBTAG00000004291) #15	SOWAHD (ENSBTAG00000046012) #16	RPL39 (ENSBTAG00000049833) ##17	UPF3B (ENSBTAG00000035615) #18	ENSBTAG00000047098	RNF113A (ENSBTAG00000006034) #19	NDUFA1 (ENSBTAG00000006033) #20	AKAP14 (ENSBTAG00000010881)	NKAP (ENSBTAG00000010884) #21	ENSBTAG00000006252	ZBTB33 (ENSBTAG00000017184) #22	TMEM255A (ENSBTAG00000017187) #24	ATP1B4 (ENSBTAG00000008920) #25	LAMP2 (ENSBTAG00000007399) #26	CUL4B (ENSBTAG00000018569) #27	MCTS1 (ENSBTAG00000034992) #28	C1GALT1C1 (ENSBTAG00000021410) #29	ENSBTAG00000038497	CT47B1 (ENSBTAG00000049471)	GRIA3 (ENSBTAG00000011833) #33	THOC2 (ENSBTAG00000008388) #34	XIAP (ENSBTAG00000040350) #35	STAG2 (ENSBTAG00000009121) #36	ENSBTAG00000052925	SH2D1A (ENSBTAG00000026067) #37	TENM1 (ENSBTAG00000018819)
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005017922 #11	STEEP1 (ENSBIXG00005007648) #12	UBE2A (ENSBIXG00005018032) #13	NKRF (ENSBIXG00005018094) #14	SEPTIN6 (ENSBIXG00005018149) #15	SOWAHD (ENSBIXG00005018178) #16	ENSBIXG00005018204 ##17	UPF3B (ENSBIXG00005002955) #18	ENSBIXG00005007810	ENSBIXG00005018249 #19	ENSBIXG00005018261 #20	ENSBIXG00005018343	NKAP (ENSBIXG00005018358) #21	ENSBIXG00005018477	ENSBIXG00005018482	ZBTB33 (ENSBIXG00005005660) #22	TMEM255A (ENSBIXG00005005989) #24	ATP1B4 (ENSBIXG00005018658) #25	LAMP2 (ENSBIXG00005018762) #26	ENSBIXG00005018794	ENSBIXG00005018843 #27	MCTS1 (ENSBIXG00005000064) #28	ENSBIXG00005018941 #29	ENSBIXG00005018971	ENSBIXG00005018987	ENSBIXG00005019009	ENSBIXG00005019025	ENSBIXG00005019034	ENSBIXG00005005666	GRIA3 (ENSBIXG00005019227) #33	ENSBIXG00005019462 #34
Bos_a	ANCESTRAL SPECIES	117																ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c.a.b
Wild yak	MODERN SPECIES	413																ZBTB33 (ENSBMUG00000022689) #22	TMEM255A (ENSBMUG00000022674) #24	ATP1B4 (ENSBMUG00000022633) #25	ENSBMUG00000022609	LAMP2 (ENSBMUG00000022601) #26	CUL4B (ENSBMUG00000022570) #27	MCTS1 (ENSBMUG00000022484) #28	ENSBMUG00000022458 #29	ENSBMUG00000022443
American bison	MODERN SPECIES	2392																ZBTB33 (ENSBBBG00000022251) #22
Caprinae	ANCESTRAL SPECIES	44	ENSGT00390000015476.c	ENSGT00530000064049.C	ENSGT00940000155028.q.b	ENSGT00950000182865.b.a.b.b.b.b	ENSGT01050000244955.a.b	ENSGT01050000244897.a.b.a	ENSGT00940000161929	ENSGT00950000183071.a.b	ENSGT00950000182897.B.a.b.a	ENSGT00510000048543.i	ENSGT00940000157245	ENSGT00940000158972	ENSGT00940000157904.d	ENSGT00680000100018.a.b	ENSGT00890000139472.h.b	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00940000153883.a.g.b	ENSGT00550000074964.i.a #28	ENSGT00940000155145.tb #29	ENSGT00390000002253.c	ENSGT00990000204933	ENSGT00940000156123.b #33	ENSGT00710000106792.o #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37
Goat	MODERN SPECIES	30	PHF6 (ENSCHIG00000012946)	HPRT1 (ENSCHIG00000015745)	GPC3 (ENSCHIG00000018483)	GPC4 (ENSCHIG00000020871)	ENSCHIG00000008922	ENSCHIG00000020224	MBNL3 (ENSCHIG00000015570)	ENSCHIG00000018598	RAP2C (ENSCHIG00000021486)	FRMD7 (ENSCHIG00000025596)	ENSCHIG00000011659	STK26 (ENSCHIG00000016017)	ENSCHIG00000020678	ENSCHIG00000024429	ENSCHIG00000011618	ZBTB33 (ENSCHIG00000015438) #22	ENSCHIG00000019985	ATP1B4 (ENSCHIG00000001251) #25	LAMP2 (ENSCHIG00000012726) #26	ENSCHIG00000007472	CUL4B (ENSCHIG00000021762) #27	ENSCHIG00000009178	MCTS1 (ENSCHIG00000016396) #28	ENSCHIG00000008443 #29	ENSCHIG00000011319	GRIA3 (ENSCHIG00000026842) #33	ENSCHIG00000017431	ENSCHIG00000017733 #34	XIAP (ENSCHIG00000011824) #35	STAG2 (ENSCHIG00000025431) #36	SH2D1A (ENSCHIG00000012378) #37
Rambouillet Sheep	MODERN SPECIES	205	PABIR2 (ENSOARG00020019581)	PLAC1 (ENSOARG00020019808)	ENSOARG00020019899	PHF6 (ENSOARG00020019956)	GPC3 (ENSOARG00020020146)	GPC4 (ENSOARG00020020284)	ENSOARG00020020355	HS6ST2 (ENSOARG00020020395)	ENSOARG00020020493	MBNL3 (ENSOARG00020020532)	ENSOARG00020020644	RAP2C (ENSOARG00020020747)	FRMD7 (ENSOARG00020020858)	STK26 (ENSOARG00020021039)	ENSOARG00020021379	ZBTB33 (ENSOARG00020021422) #22	TMEM255A (ENSOARG00020021450) #24	ATP1B4 (ENSOARG00020021596) #25	ENSOARG00020021701	LAMP2 (ENSOARG00020021742) #26	CUL4B (ENSOARG00020021896) #27	ENSOARG00020022082	MCTS1 (ENSOARG00020022102) #28	C1GALT1C1 (ENSOARG00020022174) #29	ENSOARG00020022193	ENSOARG00020022213	ENSOARG00020022245	ENSOARG00020022262	GRIA3 (ENSOARG00020022286) #33	ENSOARG00020022466 #34	XIAP (ENSOARG00020022858) #35
Siberian musk deer	MODERN SPECIES	273	SLC25A43 (ENSMMSG00000013970) #10	SLC25A5 (ENSMMSG00000013990) #11	STEEP1 (ENSMMSG00000004562) #12	UBE2A (ENSMMSG00000004657) #13	NKRF (ENSMMSG00000004768) #14	SEPTIN6 (ENSMMSG00000004838) #15	SOWAHD (ENSMMSG00000004972) #16	ENSMMSG00000004988 ##17	ENSMMSG00000005015 #18	ENSMMSG00000005037	ENSMMSG00000005050	ENSMMSG00000005059 #19	NDUFA1 (ENSMMSG00000005078) #20	ENSMMSG00000005095	NKAP (ENSMMSG00000005109) #21	ZBTB33 (ENSMMSG00000005143) #22	TMEM255A (ENSMMSG00000005190) #24	ATP1B4 (ENSMMSG00000005396) #25	ENSMMSG00000005462	LAMP2 (ENSMMSG00000005501) #26	CUL4B (ENSMMSG00000005610) #27	ENSMMSG00000005741	ENSMMSG00000005753	MCTS1 (ENSMMSG00000005797) #28	ENSMMSG00000005858 #29	ENSMMSG00000005869	ENSMMSG00000005912	ENSMMSG00000005927	GRIA3 (ENSMMSG00000005959) #33	THOC2 (ENSMMSG00000006035) #34	XIAP (ENSMMSG00000006180) #35
Yarkand deer	MODERN SPECIES	1323	STEEP1 (ENSCHYG00000012674) #12	UBE2A (ENSCHYG00000012792) #13	NKRF (ENSCHYG00000012910) #14	SEPTIN6 (ENSCHYG00000012968) #15	SOWAHD (ENSCHYG00000013226) #16	ENSCHYG00000013248	ENSCHYG00000013306 #17	UPF3B (ENSCHYG00000013449) #18	ENSCHYG00000013587 #19	ENSCHYG00000013639 #20	ENSCHYG00000013684	NKAP (ENSCHYG00000013797) #21	ENSCHYG00000013948	ENSCHYG00000014030	ENSCHYG00000014045	ZBTB33 (ENSCHYG00000014073) #22	TMEM255A (ENSCHYG00000014120) #24	ATP1B4 (ENSCHYG00000014471) #25	ENSCHYG00000014546	LAMP2 (ENSCHYG00000014639) #26	CUL4B (ENSCHYG00000014824) #27	MCTS1 (ENSCHYG00000015357) #28	ENSCHYG00000015647 #29	ENSCHYG00000015665	GRIA3 (ENSCHYG00000015734) #33	ENSCHYG00000016068 #34	ENSCHYG00000016724	XIAP (ENSCHYG00000016805) #35	STAG2 (ENSCHYG00000016931) #36	SH2D1A (ENSCHYG00000017656) #37	TENM1 (ENSCHYG00000018239)
Camelidae	ANCESTRAL SPECIES	51	ENSGT00440000039314.b #9	ENSGT00940000160686 #10	ENSGT00940000154400.b #11	ENSGT00390000002197 #12	ENSGT00940000154400.a.a ##11	ENSGT00940000155075.a.b #13	ENSGT00940000157256 #14	ENSGT00940000158026 #15	ENSGT00950000183003.a.a.a.b #16	ENSGT00390000014814.a.b.a.b.b ##17	ENSGT00390000017146.a #18	ENSGT00390000016292.i.a.d #19	ENSGT00390000007560 #20	ENSGT00950000184857	ENSGT00940000160787 #21	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000156123.b #33	ENSGT00710000106792 #34	ENSGT00940000158743 #35	ENSGT00950000182972.a.a.a.a.a #36	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b	ENSGT00940000161322	ENSGT00390000012726	ENSGT00940000162451
Arabian camel	MODERN SPECIES	204	SLC25A43 (ENSCDRG00005011317) #10	SLC25A5 (ENSCDRG00005011360) #11	STEEP1 (ENSCDRG00005011405) #12	UBE2A (ENSCDRG00005011537) #13	NKRF (ENSCDRG00005011784) #14	SEPTIN6 (ENSCDRG00005011874) #15	SOWAHD (ENSCDRG00005013280) #16	ENSCDRG00005013301	ENSCDRG00005013320 ##17	UPF3B (ENSCDRG00005013350) #18	ENSCDRG00005013451 #19	NDUFA1 (ENSCDRG00005013461) #20	ENSCDRG00005013504	ENSCDRG00005013519	NKAP (ENSCDRG00005013553) #21	ZBTB33 (ENSCDRG00005013633) #22	TMEM255A (ENSCDRG00005013662) #24	ATP1B4 (ENSCDRG00005013852) #25	ENSCDRG00005014026	LAMP2 (ENSCDRG00005014050) #26	CUL4B (ENSCDRG00005014173) #27	MCTS1 (ENSCDRG00005014524) #28	C1GALT1C1 (ENSCDRG00005006244) #29	ENSCDRG00005006259	ENSCDRG00005006287	GRIA3 (ENSCDRG00005006337) #33	THOC2 (ENSCDRG00005006591) #34	XIAP (ENSCDRG00005006872) #35	ENSCDRG00005007002	STAG2 (ENSCDRG00005007054) #36	ENSCDRG00005007179
Alpaca	MODERN SPECIES	2183																ZBTB33 (ENSVPAG00000009214) #22	ENSVPAG00000009215	ATP1B4 (ENSVPAG00000009216) #25