Sciuridae	ANCESTRAL SPECIES	27	ENSGT00440000039314.b	ENSGT00940000160686 #7	ENSGT00940000154400.b #8	ENSGT00390000002197.t ##9	ENSGT00940000155075.a.b.`b #10	ENSGT00940000157256 #11	ENSGT00940000158026 #12	ENSGT00950000183003.a.a.a.b	ENSGT00390000014814.a.b.a.a.b ##14	ENSGT00390000014814.b.s #14	ENSGT00390000017146.a #15	ENSGT00390000016292.g.a.a #16	ENSGT00390000007560 #17	ENSGT00950000184857 #18	ENSGT00940000160787 #19	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT00940000156123.b #31	ENSGT00710000106792 #32	ENSGT00940000158743 #33	ENSGT01030000236254 #34	ENSGT00950000182972.a.a.a.a.a #35	ENSGT00940000155920 #37	ENSGT01010000230270
Marmotini	ANCESTRAL SPECIES	63	ENSGT00440000039314.b	ENSGT00940000160686 #7	ENSGT00940000154400.b #8	ENSGT00390000002197.t ##9	ENSGT00940000155075.a.b.`b #10	ENSGT00940000157256 #11	ENSGT00940000158026 #12	ENSGT00950000183003.a.a.a.b	ENSGT00390000014814.a.b.a.a.b ##14	ENSGT00390000014814.b.s #14	ENSGT00390000017146.a #15	ENSGT00390000016292.g.a.a #16	ENSGT00390000007560 #17	ENSGT00950000184857 #18	ENSGT00940000160787 #19	ENSGT00940000157481 #22	ENSGT00910000148149 #23	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT00940000156123.b #31	ENSGT00710000106792 #32	ENSGT00940000158743 #33	ENSGT01030000236254 #34	ENSGT00950000182972.a.a.a.a.a #35	ENSGT00390000012691.c.b.p #36	ENSGT00940000161768.A
Alpin marmot	MODERN SPECIES	54	SLC25A43 (ENSMMMG00000007207) #7	SLC25A5 (ENSMMMG00000007201) #8	ENSMMMG00000007184 #9	UBE2A (ENSMMMG00000007093) #10	NKRF (ENSMMMG00000007091) #11	SEPTIN6 (ENSMMMG00000006734) #12	ENSMMMG00000006726 #13	ENSMMMG00000006713 #14	UPF3B (ENSMMMG00000006683) #15	RNF113A (ENSMMMG00000006679) #16	NDUFA1 (ENSMMMG00000006672) #17	ENSMMMG00000006667 #18	NKAP (ENSMMMG00000006657) #19	ENSMMMG00000006651 #20	ENSMMMG00000006648 #21	ZBTB33 (ENSMMMG00000006644) #22	ENSMMMG00000006640 #23	TMEM255A (ENSMMMG00000006602) #24	ATP1B4 (ENSMMMG00000006573) #25	LAMP2 (ENSMMMG00000006559) #26	CUL4B (ENSMMMG00000006513) #27	MCTS1 (ENSMMMG00000006488) #28	C1GALT1C1 (ENSMMMG00000006481) #29	ENSMMMG00000006455 #30	GRIA3 (ENSMMMG00000006362) #31	THOC2 (ENSMMMG00000006302) #32	XIAP (ENSMMMG00000006282) #33	ENSMMMG00000006273 #34	STAG2 (ENSMMMG00000005858) #35	ENSMMMG00000005838 #36	SH2D1A (ENSMMMG00000005794) #37
Marmotini_b	ANCESTRAL SPECIES	78	ENSGT00940000163031.b.a	ENSGT00940000160619	ENSGT00440000039314.b	ENSGT00940000160686 #7	ENSGT00940000154400.b #8	ENSGT00390000002197.t ##9	ENSGT00940000155075.a.b.`b #10	ENSGT00940000157256 #11	ENSGT00940000158026 #12	ENSGT00950000183003.a.a.a.b	ENSGT00390000014814.a.b.a.a.b ##14	ENSGT00390000017146.a #15	ENSGT00390000016292.g.a.a #16	ENSGT00390000007560 #17	ENSGT00940000160787 #19	ENSGT00940000157481 #22	ENSGT00940000160471 #24	ENSGT01030000234579.B.a #25	ENSGT00940000161768.B	ENSGT00950000182899.B.b #26	ENSGT00940000155339 #27	ENSGT00550000074964.i.a #28	ENSGT00940000155145 #29	ENSGT00940000156123.b #31	ENSGT00710000106792 #32	ENSGT00940000158743 #33	ENSGT00950000182972.a.a.a.a.a #35	ENSGT00390000012691.c.b.p #36	ENSGT00940000161768.A	ENSGT00940000155920 #37	ENSGT01030000234566.e.b.b.b
Squirrel	MODERN SPECIES	79	ENSSTOG00000022238	LONRF3 (ENSSTOG00000015024)	PGRMC1 (ENSSTOG00000024047)	SLC25A43 (ENSSTOG00000004872) #7	ENSSTOG00000020438 #8	STEEP1 (ENSSTOG00000011579) ##9	UBE2A (ENSSTOG00000011583) #10	NKRF (ENSSTOG00000020483) #11	SEPTIN6 (ENSSTOG00000011593) #12	ENSSTOG00000030492	UPF3B (ENSSTOG00000001101) #15	RNF113A (ENSSTOG00000019866) #16	NDUFA1 (ENSSTOG00000020047) #17	NKAP (ENSSTOG00000001134) #19	ENSSTOG00000021587 #20	ZBTB33 (ENSSTOG00000002304) #22	TMEM255A (ENSSTOG00000002306) #24	ATP1B4 (ENSSTOG00000002312) #25	ENSSTOG00000020706	LAMP2 (ENSSTOG00000021626) #26	CUL4B (ENSSTOG00000009208) #27	ENSSTOG00000011496 #28	C1GALT1C1 (ENSSTOG00000011499) #29	GRIA3 (ENSSTOG00000009114) #31	THOC2 (ENSSTOG00000009134) #32	XIAP (ENSSTOG00000003521) #33	STAG2 (ENSSTOG00000008577) #35	ENSSTOG00000032767 ##36	SH2D1A (ENSSTOG00000014003) #37	TENM1 (ENSSTOG00000000440)	ENSSTOG00000019526
Arctic ground squirrel	MODERN SPECIES	684																ZBTB33 (ENSUPAG00010003398) #22	TMEM255A (ENSUPAG00010003334) #24	ATP1B4 (ENSUPAG00010003321) #25	LAMP2 (ENSUPAG00010003280) #26	CUL4B (ENSUPAG00010000780) #27	MCTS1 (ENSUPAG00010000749) #28	ENSUPAG00010000684
Eurasian red squirrel	MODERN SPECIES	156	STEEP1 (ENSSVLG00005015463) ##9	ENSSVLG00005015206 #10	NKRF (ENSSVLG00005015133) #11	SEPTIN6 (ENSSVLG00005015053) #12	SOWAHD (ENSSVLG00005015012)	ENSSVLG00005014976 ##14	UPF3B (ENSSVLG00005014902) #15	RNF113A (ENSSVLG00005014872) #16	NDUFA1 (ENSSVLG00005014840) #17	ENSSVLG00005014815	ENSSVLG00005014769	ENSSVLG00005014730 #18	NKAP (ENSSVLG00005014692) #19	ENSSVLG00005014664	ENSSVLG00005014617	ZBTB33 (ENSSVLG00005014593) #22	TMEM255A (ENSSVLG00005014430) #24	ATP1B4 (ENSSVLG00005014140) #25	ENSSVLG00005014061	LAMP2 (ENSSVLG00005013943) #26	ENSSVLG00005013800	ENSSVLG00005013703 #27	MCTS1 (ENSSVLG00005013371) #28	ENSSVLG00005013289 #29	ENSSVLG00005013222	ENSSVLG00005013100	ENSSVLG00005013039	GRIA3 (ENSSVLG00005012602) #31	THOC2 (ENSSVLG00005012119) #32	ENSSVLG00005012039	XIAP (ENSSVLG00005011965) #33