Murinae	ANCESTRAL SPECIES	16	ENSGT00940000162731 #7	ENSGT00940000159187 #8	ENSGT00390000016695 #9	ENSGT00940000153259.a.a.b #10	ENSGT00950000183171.B #11	ENSGT00730000111659	ENSGT00940000154936.qb #12	ENSGT00940000154103.a #13	ENSGT00530000063529.A #14	ENSGT00940000158055 #15	ENSGT00730000111111 #16	ENSGT00940000157332 #18	ENSGT00940000157443 #19	ENSGT00940000153676.b #20	ENSGT00390000004360.a.b.a.a.b #21	ENSGT00940000158209 #22	ENSGT00950000182865.b.a.b.b.b.a.e #25	ENSGT00950000182865.b.a.b.b.b.a.f #23	ENSGT00940000155814 #28	ENSGT00840000130852.b #29	ENSGT01050000247125	ENSGT00840000130852.a.a #30	ENSGT00940000160956 #31	ENSGT00950000183079.A.b.c.b #32	ENSGT00940000153716.A #33	ENSGT00390000008171	ENSGT00500000045005 #34	ENSGT00390000003152.j #35	ENSGT00940000159161 #36	ENSGT00940000153139.A #37	ENSGT00390000016366
Mus	ANCESTRAL SPECIES	8	ENSGT00940000159187 #8	ENSGT00390000016695 #9	ENSGT00940000153259.a.a.b #10	ENSGT00950000183171.B #11	ENSGT00940000154936.qb #12	ENSGT00730000111659	ENSGT00940000154103.a #13	ENSGT00530000063529.A #14	ENSGT00940000158055 #15	ENSGT00730000111111 #16	ENSGT00860000136284	ENSGT00940000157332 #18	ENSGT00940000157443 #19	ENSGT00940000153676.b #20	ENSGT00390000004360.a.b.a.a.b #21	ENSGT00940000158209 #22	ENSGT00950000182865.b.a.b.b.b.a.e.a #25	ENSGT00950000182865.b.a.b.b.b.a.f #23	ENSGT00940000155814 #28	ENSGT00840000130852.b #29	ENSGT00840000130852.a.a #30	ENSGT00940000160956 #31	ENSGT00950000183079.A.b.c.b #32	ENSGT00940000153716.A #33	ENSGT00390000008171	ENSGT00500000045005 #34	ENSGT00390000003152.j #35	ENSGT00940000159161 #36	ENSGT00940000153139.A #37	ENSGT00390000016366	ENSGT00940000161739
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000159187 #8	ENSGT00390000016695 #9	ENSGT00940000153259.a.a.b #10	ENSGT00950000183171.B #11	ENSGT00940000154936.qb #12	ENSGT00730000111659	ENSGT00940000154103.a #13	ENSGT00530000063529.A #14	ENSGT00940000158055 #15	ENSGT00730000111111 #16	ENSGT00860000136284	ENSGT00940000157332 #18	ENSGT00940000157443 #19	ENSGT00940000153676.b #20	ENSGT00390000004360.a.b.a.a.b #21	ENSGT00940000158209 #22	ENSGT00950000182865.b.a.b.b.b.a.e.a #25	ENSGT00950000182865.b.a.b.b.b.a.f.b ##23	ENSGT00940000155814 #28	ENSGT00840000130852.b #29	ENSGT00840000130852.a.a #30	ENSGT00940000160956 #31	ENSGT00950000183079.A.b.c.b #32	ENSGT00940000153716.A #33	ENSGT00390000008171	ENSGT00500000045005 #34	ENSGT00390000003152.j #35	ENSGT00940000159161 #36	ENSGT00940000153139.A #37	ENSGT00390000016366	ENSGT00940000161739
Ryukyu mouse	MODERN SPECIES	5	Arl11 (MGP_CAROLIEiJ_G0019382) #7	Sgcg (MGP_CAROLIEiJ_G0019381) #8	Sacs (MGP_CAROLIEiJ_G0019380) #9	Tnfrsf19 (MGP_CAROLIEiJ_G0019379) #10	Mipep (MGP_CAROLIEiJ_G0019378) #11	C1qtnf9 (MGP_CAROLIEiJ_G0019377) #12	Spata13 (MGP_CAROLIEiJ_G0019376) #13	Amer2 (MGP_CAROLIEiJ_G0019375) #14	Mtmr6 (MGP_CAROLIEiJ_G0019374) #15	Gm49336 (MGP_CAROLIEiJ_G0019373) #16	MGP_CAROLIEiJ_G0019372 #17	Atp8a2 (MGP_CAROLIEiJ_G0019371) #18	Shisa2 (MGP_CAROLIEiJ_G0019370) #19	Cdadc1 (MGP_CAROLIEiJ_G0019369) #20	Cab39l (MGP_CAROLIEiJ_G0019368) #21	Setdb2 (MGP_CAROLIEiJ_G0019367) #22	MGP_CAROLIEiJ_G0019366 #23	MGP_CAROLIEiJ_G0019362 #24	MGP_CAROLIEiJ_G0019365 #25	MGP_CAROLIEiJ_G0019363 #26	MGP_CAROLIEiJ_G0019364 #27	MGP_CAROLIEiJ_G0019361 #28	MGP_CAROLIEiJ_G0019360 #29	1700129C05Rik (MGP_CAROLIEiJ_G0019359) #30	Fgf9 (MGP_CAROLIEiJ_G0019358) #31	Micu2 (MGP_CAROLIEiJ_G0019357) #32	Zdhhc20 (MGP_CAROLIEiJ_G0019356) #33	Ska3 (MGP_CAROLIEiJ_G0019355) #34	MGP_CAROLIEiJ_G0019354 #35	Lats2 (MGP_CAROLIEiJ_G0019353) #36	Xpo4 (MGP_CAROLIEiJ_G0019352) #37
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000159187 #8	ENSGT00390000016695 #9	ENSGT00940000153259.a.a.b #10	ENSGT00950000183171.B #11	ENSGT00940000154936.qb #12	ENSGT00730000111659	ENSGT00940000154103.a #13	ENSGT00530000063529.A #14	ENSGT00940000158055 #15	ENSGT00730000111111 #16	ENSGT00860000136284	ENSGT00940000157332 #18	ENSGT00940000157443 #19	ENSGT00940000153676.b #20	ENSGT00390000004360.a.b.a.a.b #21	ENSGT00940000158209 #22	ENSGT00950000182865.b.a.b.b.b.a.e.a #25	ENSGT00950000182865.b.a.b.b.b.a.f.b ##23	ENSGT00940000155814 #28	ENSGT00840000130852.b #29	ENSGT00840000130852.a.a #30	ENSGT00940000160956 #31	ENSGT00950000183079.A.b.c.b #32	ENSGT00940000153716.A #33	ENSGT00390000008171	ENSGT00500000045005 #34	ENSGT00390000003152.j #35	ENSGT00940000159161 #36	ENSGT00940000153139.A #37	ENSGT00390000016366	ENSGT00940000161739
Mouse	MODERN SPECIES	5	Ebpl (ENSMUSG00000021928)	Arl11 (ENSMUSG00000043157) #7	Sgcg (ENSMUSG00000035296) #8	Sacs (ENSMUSG00000048279) #9	Tnfrsf19 (ENSMUSG00000060548) #10	Mipep (ENSMUSG00000021993) #11	C1qtnf9 (ENSMUSG00000071347) #12	Spata13 (ENSMUSG00000021990) #13	Amer2 (ENSMUSG00000021986) #14	Mtmr6 (ENSMUSG00000021987) #15	Gm49336 (ENSMUSG00000114797) #16	Atp8a2 (ENSMUSG00000021983) #18	Shisa2 (ENSMUSG00000044461) #19	Cdadc1 (ENSMUSG00000021982) #20	Cab39l (ENSMUSG00000021981) #21	Setdb2 (ENSMUSG00000071350) #22	Phf11c (ENSMUSG00000091144) #25	Phf11d (ENSMUSG00000068245) #23	Phf11b (ENSMUSG00000091649) ##23	Phf11a (ENSMUSG00000044703) ##23	Rcbtb1 (ENSMUSG00000035469) #28	1700129C05Rik (ENSMUSG00000021977) #30	Fgf9 (ENSMUSG00000021974) #31	Micu2 (ENSMUSG00000021973) #32	Zdhhc20 (ENSMUSG00000021969) #33	Mrpl57 (ENSMUSG00000021967)	Ska3 (ENSMUSG00000021965) #34	Sap18 (ENSMUSG00000021963) #35	Lats2 (ENSMUSG00000021959) #36	Xpo4 (ENSMUSG00000021952) #37	Eef1akmt1 (ENSMUSG00000021951)
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000159187 #8	ENSGT00390000016695 #9	ENSGT00940000153259.a.a.b #10	ENSGT00950000183171.B #11	ENSGT00940000154936.qb #12	ENSGT00730000111659	ENSGT00940000154103.a #13	ENSGT00530000063529.A #14	ENSGT00940000158055 #15	ENSGT00730000111111 #16	ENSGT00860000136284	ENSGT00940000157332 #18	ENSGT00940000157443 #19	ENSGT00940000153676.b #20	ENSGT00390000004360.a.b.a.a.b #21	ENSGT00940000158209 #22	ENSGT00950000182865.b.a.b.b.b.a.e.a #25	ENSGT00950000182865.b.a.b.b.b.a.f.b ##23	ENSGT00940000155814 #28	ENSGT00840000130852.b #29	ENSGT00840000130852.a.a #30	ENSGT00940000160956 #31	ENSGT00950000183079.A.b.c.b #32	ENSGT00940000153716.A #33	ENSGT00390000008171	ENSGT00500000045005 #34	ENSGT00390000003152.j #35	ENSGT00940000159161 #36	ENSGT00940000153139.A #37	ENSGT00390000016366	ENSGT00940000161739
Steppe mouse	MODERN SPECIES	3236	ENSMSIG00000024911	Tnfrsf19 (ENSMSIG00000024914) #10	Mipep (ENSMSIG00000024958) #11	C1qtnf9 (ENSMSIG00000024999) #12	ENSMSIG00000025002	Spata13 (ENSMSIG00000025007) #13	ENSMSIG00000025098 #14	Mtmr6 (ENSMSIG00000025110) #15	Gm49336 (ENSMSIG00000025212) #16	Atp8a2 (ENSMSIG00000025342) #18	ENSMSIG00000025497	ENSMSIG00000025501	Shisa2 (ENSMSIG00000025508) #19	Cdadc1 (ENSMSIG00000025526) #20	Cab39l (ENSMSIG00000026112) #21	ENSMSIG00000026181 #22	ENSMSIG00000026348
spretus	MODERN SPECIES	5	Arl11 (MGP_SPRETEiJ_G0020274) #7	Sgcg (MGP_SPRETEiJ_G0020273) #8	Sacs (MGP_SPRETEiJ_G0020272) #9	Tnfrsf19 (MGP_SPRETEiJ_G0020271) #10	Mipep (MGP_SPRETEiJ_G0020270) #11	C1qtnf9 (MGP_SPRETEiJ_G0020269) #12	Spata13 (MGP_SPRETEiJ_G0020268) #13	Amer2 (MGP_SPRETEiJ_G0020267) #14	Mtmr6 (MGP_SPRETEiJ_G0020266) #15	Gm49336 (MGP_SPRETEiJ_G0020265) #16	MGP_SPRETEiJ_G0020264	Atp8a2 (MGP_SPRETEiJ_G0020263) #18	Shisa2 (MGP_SPRETEiJ_G0020262) #19	Cdadc1 (MGP_SPRETEiJ_G0020261) #20	Cab39l (MGP_SPRETEiJ_G0020260) #21	Setdb2 (MGP_SPRETEiJ_G0020259) #22	MGP_SPRETEiJ_G0020258 #25	MGP_SPRETEiJ_G0020257 ##23	MGP_SPRETEiJ_G0020256 #28	MGP_SPRETEiJ_G0020255 #29	1700129C05Rik (MGP_SPRETEiJ_G0020254) #30	Fgf9 (MGP_SPRETEiJ_G0020253) #31	Micu2 (MGP_SPRETEiJ_G0020252) #32	Zdhhc20 (MGP_SPRETEiJ_G0020251) #33	Mrpl57 (MGP_SPRETEiJ_G0020250)	Ska3 (MGP_SPRETEiJ_G0020249) #34	MGP_SPRETEiJ_G0020248 #35	Lats2 (MGP_SPRETEiJ_G0020247) #36	Xpo4 (MGP_SPRETEiJ_G0020246) #37	Eef1akmt1 (MGP_SPRETEiJ_G0020245)	Il17d (MGP_SPRETEiJ_G0020244)
Shrew mouse	MODERN SPECIES	21	Arl11 (MGP_PahariEiJ_G0030400) #7	Sgcg (MGP_PahariEiJ_G0030399) #8	Sacs (MGP_PahariEiJ_G0030398) #9	Tnfrsf19 (MGP_PahariEiJ_G0030397) #10	Mipep (MGP_PahariEiJ_G0030396) #11	C1qtnf9 (MGP_PahariEiJ_G0030395) #12	Spata13 (MGP_PahariEiJ_G0030394) #13	Amer2 (MGP_PahariEiJ_G0030393) #14	Mtmr6 (MGP_PahariEiJ_G0030392) #15	Gm49336 (MGP_PahariEiJ_G0030391) #16	MGP_PahariEiJ_G0030390	Atp8a2 (MGP_PahariEiJ_G0030389) #18	Shisa2 (MGP_PahariEiJ_G0030388) #19	Cdadc1 (MGP_PahariEiJ_G0030387) #20	Cab39l (MGP_PahariEiJ_G0030386) #21	Setdb2 (MGP_PahariEiJ_G0030385) #22	MGP_PahariEiJ_G0030384 #25	MGP_PahariEiJ_G0030383 ##23	MGP_PahariEiJ_G0030382 #23	MGP_PahariEiJ_G0030381 #23	Rcbtb1 (MGP_PahariEiJ_G0030380) #28	MGP_PahariEiJ_G0030379 #29	1700129C05Rik (MGP_PahariEiJ_G0030378) #30	Fgf9 (MGP_PahariEiJ_G0030377) #31	Micu2 (MGP_PahariEiJ_G0030376) #32	Zdhhc20 (MGP_PahariEiJ_G0030375) #33	Mrpl57 (MGP_PahariEiJ_G0030374)	Ska3 (MGP_PahariEiJ_G0030373) #34	MGP_PahariEiJ_G0030372 #35	Lats2 (MGP_PahariEiJ_G0030371) #36	Xpo4 (MGP_PahariEiJ_G0030370) #37
Rat	MODERN SPECIES	6	AABR07018124.1 (ENSRNOG00000042281)	Sacs (ENSRNOG00000014509) #9	Tnfrsf19 (ENSRNOG00000014265) #10	Mipep (ENSRNOG00000013876) #11	ENSRNOG00000068540	C1qtnf9 (ENSRNOG00000013793) #12	Spata13 (ENSRNOG00000013707) #13	Amer2 (ENSRNOG00000013623) #14	Mtmr6 (ENSRNOG00000012918) #15	Nup58 (ENSRNOG00000012644) #16	Atp8a2 (ENSRNOG00000008053) #18	Shisa2 (ENSRNOG00000012521) #19	Cdadc1 (ENSRNOG00000012209) #20	Cab39l (ENSRNOG00000011603) #21	LOC108348241 (ENSRNOG00000069746) #23	Setdb2 (ENSRNOG00000021680) #22	ENSRNOG00000065100 #23	Phf11 (ENSRNOG00000053891) #23	Phf11b (ENSRNOG00000064184) #23	ENSRNOG00000067681	Rcbtb1 (ENSRNOG00000021712) #28	RGD1563302 (ENSRNOG00000038917) #29	ENSRNOG00000064315	LOC691850 (ENSRNOG00000053522)	Fgf9 (ENSRNOG00000011471) #31	Micu2 (ENSRNOG00000011168) #32	Zdhhc20 (ENSRNOG00000011024) #33	Mrpl57 (ENSRNOG00000062588)	Ska3 (ENSRNOG00000021847) #34	Sap18-ps1 (ENSRNOG00000064694) #35	Lats2 (ENSRNOG00000056343) #36