Tetrapoda	ANCESTRAL SPECIES	32	ENSGT01030000234555.b	ENSGT00940000153648.a	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000164719	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00950000183019.f.b.b #21	ENSGT00940000157916 #19	ENSGT00390000000862 #31	ENSGT00940000156160
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000164719	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160
Mammalia	ANCESTRAL SPECIES	59	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Theria	ANCESTRAL SPECIES	5	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Eutheria	ANCESTRAL SPECIES	10	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Primates	ANCESTRAL SPECIES	13	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Simiiformes	ANCESTRAL SPECIES	15	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Catarrhini	ANCESTRAL SPECIES	16	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00910000147849 #9	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Hominidae	ANCESTRAL SPECIES	17	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00910000147849 #9	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00910000147849 #9	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Gorilla	MODERN SPECIES	15	SLC11A1 (ENSGGOG00000013353) #7	CTDSP1 (ENSGGOG00000013361) #8	ENSGGOG00000041563 #9	VIL1 (ENSGGOG00000014322) #10	USP37 (ENSGGOG00000014335) #11	CNOT9 (ENSGGOG00000011091) #12	PLCD4 (ENSGGOG00000011858) #13	ENSGGOG00000024718 #14	BCS1L (ENSGGOG00000001899) #15	RNF25 (ENSGGOG00000001901) #16	ENSGGOG00000043717 #17	ENSGGOG00000001905 #18	TTLL4 (ENSGGOG00000001914) #19	CYP27A1 (ENSGGOG00000003243) #20	PRKAG3 (ENSGGOG00000003249) #21	WNT6 (ENSGGOG00000003259) #22	WNT10A (ENSGGOG00000000870) #23	ENSGGOG00000007771 #24	FEV (ENSGGOG00000010787) #25	CRYBA2 (ENSGGOG00000010794) #26	CFAP65 (ENSGGOG00000010798) #27	ENSGGOG00000041386 #28	NHEJ1 (ENSGGOG00000010822) #29	SLC23A3 (ENSGGOG00000010828) #30	CNPPD1 (ENSGGOG00000010837) #31	RETREG2 (ENSGGOG00000010846) #32	STK16 (ENSGGOG00000010907) #33	TUBA4A (ENSGGOG00000023578) #34	TUBA4B (ENSGGOG00000040612) #35	DNAJB2 (ENSGGOG00000010915) #36	PTPRN (ENSGGOG00000011854) #37
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Human	MODERN SPECIES	11	TMBIM1 (ENSG00000135926)	CATIP (ENSG00000158428)	SLC11A1 (ENSG00000018280) #7	CTDSP1 (ENSG00000144579) #8	VIL1 (ENSG00000127831) #10	USP37 (ENSG00000135913) #11	CNOT9 (ENSG00000144580) #12	PLCD4 (ENSG00000115556) #13	ZNF142 (ENSG00000115568)	BCS1L (ENSG00000074582) #15	RNF25 (ENSG00000163481) #16	STK36 (ENSG00000163482) #18	TTLL4 (ENSG00000135912) #19	CYP27A1 (ENSG00000135929) #20	PRKAG3 (ENSG00000115592) #21	WNT6 (ENSG00000115596) #22	WNT10A (ENSG00000135925) #23	CDK5R2 (ENSG00000171450) #24	FEV (ENSG00000163497) #25	CRYBA2 (ENSG00000163499) #26	CFAP65 (ENSG00000181378) #27	IHH (ENSG00000163501) #28	NHEJ1 (ENSG00000187736) #29	SLC23A3 (ENSG00000213901) #30	CNPPD1 (ENSG00000115649) #31	RETREG2 (ENSG00000144567) #32	ZFAND2B (ENSG00000158552)	ABCB6 (ENSG00000115657)	ATG9A (ENSG00000198925)	ANKZF1 (ENSG00000163516)	GLB1L (ENSG00000163521)
Pan	ANCESTRAL SPECIES	12	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Chimpanzee	MODERN SPECIES	15	TMBIM1 (ENSPTRG00000012915)	CATIP (ENSPTRG00000012916)	SLC11A1 (ENSPTRG00000012917) #7	CTDSP1 (ENSPTRG00000012918) #8	VIL1 (ENSPTRG00000012919) #10	USP37 (ENSPTRG00000012920) #11	CNOT9 (ENSPTRG00000012921) #12	PLCD4 (ENSPTRG00000012922) #13	ZNF142 (ENSPTRG00000012923)	BCS1L (ENSPTRG00000012924) #15	RNF25 (ENSPTRG00000012925) #16	STK36 (ENSPTRG00000012926) #18	TTLL4 (ENSPTRG00000012927) #19	CYP27A1 (ENSPTRG00000012928) #20	PRKAG3 (ENSPTRG00000012929) #21	WNT6 (ENSPTRG00000045565) #22	WNT10A (ENSPTRG00000012931) #23	CDK5R2 (ENSPTRG00000042910) #24	FEV (ENSPTRG00000045039) #25	CRYBA2 (ENSPTRG00000012934) #26	CFAP65 (ENSPTRG00000012937) #27	IHH (ENSPTRG00000012938) #28	NHEJ1 (ENSPTRG00000034481) #29	SLC23A3 (ENSPTRG00000012940) #30	CNPPD1 (ENSPTRG00000012941) #31	RETREG2 (ENSPTRG00000012942) #32	ZFAND2B (ENSPTRG00000012944)	ABCB6 (ENSPTRG00000012945)	ATG9A (ENSPTRG00000012943)	ANKZF1 (ENSPTRG00000012946)	GLB1L (ENSPTRG00000012947)
Bonobo	MODERN SPECIES	15	TMBIM1 (ENSPPAG00000033659)	CATIP (ENSPPAG00000031409)	SLC11A1 (ENSPPAG00000035104) #7	CTDSP1 (ENSPPAG00000043173) #8	VIL1 (ENSPPAG00000005529) #10	USP37 (ENSPPAG00000029374) #11	CNOT9 (ENSPPAG00000037194) #12	PLCD4 (ENSPPAG00000039759) #13	ZNF142 (ENSPPAG00000032732)	BCS1L (ENSPPAG00000029284) #15	RNF25 (ENSPPAG00000027047) #16	STK36 (ENSPPAG00000029478) #18	TTLL4 (ENSPPAG00000027434) #19	CYP27A1 (ENSPPAG00000042128) #20	PRKAG3 (ENSPPAG00000028591) #21	WNT6 (ENSPPAG00000010119) #22	WNT10A (ENSPPAG00000041398) #23	ENSPPAG00000018034 #25	CRYBA2 (ENSPPAG00000018250) #26	CFAP65 (ENSPPAG00000020522) #27	IHH (ENSPPAG00000034087) #28	NHEJ1 (ENSPPAG00000042844) #29	SLC23A3 (ENSPPAG00000041866) #30	CNPPD1 (ENSPPAG00000034311) #31	RETREG2 (ENSPPAG00000040645) #32	ZFAND2B (ENSPPAG00000034039)	ABCB6 (ENSPPAG00000031060)	ATG9A (ENSPPAG00000035200)	ANKZF1 (ENSPPAG00000031695)	GLB1L (ENSPPAG00000035895)	TUBA4A (ENSPPAG00000011142) #34
Orangutan	MODERN SPECIES	15	TMBIM1 (ENSPPYG00000013168)	ENSPPYG00000013171	SLC11A1 (ENSPPYG00000013172) #7	CTDSP1 (ENSPPYG00000036372) #8	VIL1 (ENSPPYG00000013174) #10	USP37 (ENSPPYG00000013175) #11	CNOT9 (ENSPPYG00000036751) #12	PLCD4 (ENSPPYG00000013177) #13	ZNF142 (ENSPPYG00000013178)	BCS1L (ENSPPYG00000013179) #15	RNF25 (ENSPPYG00000013180) #16	STK36 (ENSPPYG00000013181) #18	TTLL4 (ENSPPYG00000013182) #19	CYP27A1 (ENSPPYG00000013385) #20	PRKAG3 (ENSPPYG00000013184) #21	WNT6 (ENSPPYG00000013185) #22	WNT10A (ENSPPYG00000032996) #23	CDK5R2 (ENSPPYG00000013188) #24	FEV (ENSPPYG00000013189) #25	CRYBA2 (ENSPPYG00000013190) #26	CFAP65 (ENSPPYG00000013191) #27	IHH (ENSPPYG00000033632) #28	NHEJ1 (ENSPPYG00000013193) #29	SLC23A3 (ENSPPYG00000013194) #30	CNPPD1 (ENSPPYG00000013195) #31	ENSPPYG00000013196	ZFAND2B (ENSPPYG00000013197)	ABCB6 (ENSPPYG00000013198)	ATG9A (ENSPPYG00000013199)	ANKZF1 (ENSPPYG00000013200)	GLB1L (ENSPPYG00000013201)
Gibbon	MODERN SPECIES	14	CATIP (ENSNLEG00000008566)	SLC11A1 (ENSNLEG00000008589) #7	ENSNLEG00000008612 #8	ENSNLEG00000035866 #9	VIL1 (ENSNLEG00000008619) #10	USP37 (ENSNLEG00000008655) #11	CNOT9 (ENSNLEG00000008737) #12	PLCD4 (ENSNLEG00000008756) #13	ZNF142 (ENSNLEG00000008760)	BCS1L (ENSNLEG00000030685) #15	RNF25 (ENSNLEG00000008812) #16	STK36 (ENSNLEG00000008852) #18	TTLL4 (ENSNLEG00000008904) #19	CYP27A1 (ENSNLEG00000008910) #20	PRKAG3 (ENSNLEG00000008942) #21	WNT6 (ENSNLEG00000008977) #22	WNT10A (ENSNLEG00000008992) #23	CDK5R2 (ENSNLEG00000018723) #24	FEV (ENSNLEG00000009001) #25	CRYBA2 (ENSNLEG00000009012) #26	CFAP65 (ENSNLEG00000009025) #27	IHH (ENSNLEG00000009054) #28	NHEJ1 (ENSNLEG00000009056) #29	SLC23A3 (ENSNLEG00000009070) #30	CNPPD1 (ENSNLEG00000034862) #31	RETREG2 (ENSNLEG00000035903) #32	ZFAND2B (ENSNLEG00000009113)	ABCB6 (ENSNLEG00000009125)	ATG9A (ENSNLEG00000009166)	ANKZF1 (ENSNLEG00000009207)	GLB1L (ENSNLEG00000009246)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Rhinopithecus	ANCESTRAL SPECIES	84	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225.k #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Black snub-nosed monkey	MODERN SPECIES	1865	CATIP (ENSRBIG00000038110)	SLC11A1 (ENSRBIG00000027755) #7	CTDSP1 (ENSRBIG00000042754) #8	VIL1 (ENSRBIG00000044160) #10	USP37 (ENSRBIG00000031381) #11	CNOT9 (ENSRBIG00000042739) #12	PLCD4 (ENSRBIG00000028935) #13	ZNF142 (ENSRBIG00000029685)	BCS1L (ENSRBIG00000004869) #15	RNF25 (ENSRBIG00000031654) #16	STK36 (ENSRBIG00000031646) #18	TTLL4 (ENSRBIG00000032517) #19	ENSRBIG00000036284	CYP27A1 (ENSRBIG00000032606) #20	PRKAG3 (ENSRBIG00000007017) #21	WNT6 (ENSRBIG00000007103) #22	WNT10A (ENSRBIG00000045014) #23	CDK5R2 (ENSRBIG00000000138) #24	FEV (ENSRBIG00000045018) #25	CRYBA2 (ENSRBIG00000045013) #26	CFAP65 (ENSRBIG00000003141) #27	IHH (ENSRBIG00000041034) #28	NHEJ1 (ENSRBIG00000043995) #29	SLC23A3 (ENSRBIG00000034617) #30	CNPPD1 (ENSRBIG00000039903) #31	RETREG2 (ENSRBIG00000038957) #32	ZFAND2B (ENSRBIG00000034393)	ABCB6 (ENSRBIG00000038255)	ATG9A (ENSRBIG00000026492)	ANKZF1 (ENSRBIG00000038988)	GLB1L (ENSRBIG00000034384)
Golden snub-nosed monkey	MODERN SPECIES	872	CATIP (ENSRROG00000043693)	SLC11A1 (ENSRROG00000040779) #7	CTDSP1 (ENSRROG00000029617) #8	VIL1 (ENSRROG00000041887) #10	USP37 (ENSRROG00000043661) #11	ENSRROG00000044345 #12	PLCD4 (ENSRROG00000040960) #13	ZNF142 (ENSRROG00000044151)	BCS1L (ENSRROG00000042953) #15	RNF25 (ENSRROG00000041905) #16	STK36 (ENSRROG00000036005) #18	TTLL4 (ENSRROG00000036492) #19	CYP27A1 (ENSRROG00000037168) #20	ENSRROG00000031614	PRKAG3 (ENSRROG00000031522) #21	WNT6 (ENSRROG00000015395) #22	WNT10A (ENSRROG00000031543) #23	FEV (ENSRROG00000024839) #25	CRYBA2 (ENSRROG00000042620) #26	CFAP65 (ENSRROG00000031405) #27	IHH (ENSRROG00000043496) #28	NHEJ1 (ENSRROG00000029121) #29	SLC23A3 (ENSRROG00000034184) #30	CNPPD1 (ENSRROG00000028894) #31	RETREG2 (ENSRROG00000044678) #32	ZFAND2B (ENSRROG00000038500)	ABCB6 (ENSRROG00000040255)	ATG9A (ENSRROG00000002900)	ANKZF1 (ENSRROG00000035342)	GLB1L (ENSRROG00000036143)	STK16 (ENSRROG00000039079) #33
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Vervet Monkey	MODERN SPECIES	1	ENSCSAG00000008880	CATIP (ENSCSAG00000008874)	SLC11A1 (ENSCSAG00000008860) #7	CTDSP1 (ENSCSAG00000008845) #8	VIL1 (ENSCSAG00000008837) #10	USP37 (ENSCSAG00000008823) #11	CNOT9 (ENSCSAG00000008806) #12	PLCD4 (ENSCSAG00000008792) #13	ZNF142 (ENSCSAG00000008779)	BCS1L (ENSCSAG00000008774) #15	RNF25 (ENSCSAG00000008769) #16	STK36 (ENSCSAG00000008730) #18	TTLL4 (ENSCSAG00000008654) #19	CYP27A1 (ENSCSAG00000008643) #20	PRKAG3 (ENSCSAG00000008637) #21	WNT6 (ENSCSAG00000008630) #22	WNT10A (ENSCSAG00000008612) #23	CDK5R2 (ENSCSAG00000018779) #24	FEV (ENSCSAG00000008586) #25	CRYBA2 (ENSCSAG00000008573) #26	CFAP65 (ENSCSAG00000008506) #27	IHH (ENSCSAG00000008404) #28	NHEJ1 (ENSCSAG00000008380) #29	SLC23A3 (ENSCSAG00000008344) #30	CNPPD1 (ENSCSAG00000008316) #31	RETREG2 (ENSCSAG00000008270) #32	ZFAND2B (ENSCSAG00000008239)	ABCB6 (ENSCSAG00000008232)	ATG9A (ENSCSAG00000008219)	ANKZF1 (ENSCSAG00000008195)	GLB1L (ENSCSAG00000008146)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375.w.a #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Macaca	DUPLICATION
Macaca	ANCESTRAL SPECIES																	ENSGT00940000159281.u #22
Macaca_a	ANCESTRAL SPECIES																	ENSGT00940000159281.u #22
Crab-eating macaque	MODERN SPECIES	86																ENSMFAG00000056385 #22
Macaca	ANCESTRAL SPECIES	15	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375.w.a #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281.v #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Pig-tailed macaque	MODERN SPECIES	570	TMBIM1 (ENSMNEG00000033212)	CATIP (ENSMNEG00000028662)	SLC11A1 (ENSMNEG00000043330) #7	CTDSP1 (ENSMNEG00000010458) #8	VIL1 (ENSMNEG00000034956) #10	USP37 (ENSMNEG00000038072) #11	CNOT9 (ENSMNEG00000001265) #12	PLCD4 (ENSMNEG00000028669) #13	ZNF142 (ENSMNEG00000041285)	BCS1L (ENSMNEG00000035775) #15	RNF25 (ENSMNEG00000039298) #16	STK36 (ENSMNEG00000041592) #18	TTLL4 (ENSMNEG00000040167) #19	CYP27A1 (ENSMNEG00000033809) #20	PRKAG3 (ENSMNEG00000037455) #21	WNT6 (ENSMNEG00000031462) #22	WNT10A (ENSMNEG00000043976) #23	CDK5R2 (ENSMNEG00000012704) #24	FEV (ENSMNEG00000044702) #25	CRYBA2 (ENSMNEG00000035350) #26	CFAP65 (ENSMNEG00000037521) #27	IHH (ENSMNEG00000042582) #28	NHEJ1 (ENSMNEG00000030294) #29	SLC23A3 (ENSMNEG00000042866) #30	CNPPD1 (ENSMNEG00000040784) #31	RETREG2 (ENSMNEG00000042950) #32	ZFAND2B (ENSMNEG00000041938)	ABCB6 (ENSMNEG00000040783)	ATG9A (ENSMNEG00000030084)	ANKZF1 (ENSMNEG00000043308)	GLB1L (ENSMNEG00000032580)
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375.w.a #18	ENSGT00940000157916 #19	ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.b.b	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281.v #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000161627.a.a.a.b.a.b.b.a.a.b.b.a.a.a.b	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Rhesus	MODERN SPECIES	3	PNKD (ENSMMUG00000038299)	TMBIM1 (ENSMMUG00000022817)	CATIP (ENSMMUG00000031218)	SLC11A1 (ENSMMUG00000013359) #7	VIL1 (ENSMMUG00000016899) #10	USP37 (ENSMMUG00000015218) #11	PLCD4 (ENSMMUG00000009626) #13	ZNF142 (ENSMMUG00000006737)	BCS1L (ENSMMUG00000006740) #15	RNF25 (ENSMMUG00000006743) #16	STK36 (ENSMMUG00000006744) #18	TTLL4 (ENSMMUG00000006755) #19	ENSMMUG00000049592	CYP27A1 (ENSMMUG00000006758) #20	PRKAG3 (ENSMMUG00000021877) #21	WNT6 (ENSMMUG00000052954) #22	WNT10A (ENSMMUG00000055913) #23	CDK5R2 (ENSMMUG00000031210) #24	FEV (ENSMMUG00000064772) #25	CRYBA2 (ENSMMUG00000064755) #26	CFAP65 (ENSMMUG00000000783) #27	IHH (ENSMMUG00000000785) #28	NHEJ1 (ENSMMUG00000000786) #29	SLC23A3 (ENSMMUG00000000788) #30	CNPPD1 (ENSMMUG00000000791) #31	RETREG2 (ENSMMUG00000000792)	ENSMMUG00000061332	ZFAND2B (ENSMMUG00000019614)	ATG9A (ENSMMUG00000019619)	ANKZF1 (ENSMMUG00000014510)	GLB1L (ENSMMUG00000019624)
Crab-eating macaque	MODERN SPECIES	3	SLC11A1 (ENSMFAG00000044291) #7	CTDSP1 (ENSMFAG00000032883) #8	VIL1 (ENSMFAG00000043203) #10	USP37 (ENSMFAG00000003758) #11	CNOT9 (ENSMFAG00000036064) #12	PLCD4 (ENSMFAG00000031094) #13	ZNF142 (ENSMFAG00000043994)	BCS1L (ENSMFAG00000044997) #15	RNF25 (ENSMFAG00000000075) #16	STK36 (ENSMFAG00000003769) #18	TTLL4 (ENSMFAG00000000211) #19	ENSMFAG00000049583	ENSMFAG00000063834	CYP27A1 (ENSMFAG00000036102) #20	ENSMFAG00000044297 #21	ENSMFAG00000048149 #22	ENSMFAG00000061914 #21	WNT10A (ENSMFAG00000040659) #23	ENSMFAG00000017685	FEV (ENSMFAG00000000657) #25	CRYBA2 (ENSMFAG00000030380) #26	CFAP65 (ENSMFAG00000045713) #27	CNPPD1 (ENSMFAG00000045097) #31	NHEJ1 (ENSMFAG00000037501) #29	IHH (ENSMFAG00000059126) #28	SLC23A3 (ENSMFAG00000043251) #30	RETREG2 (ENSMFAG00000001474) #32	ENSMFAG00000062176	ZFAND2B (ENSMFAG00000032980)	ABCB6 (ENSMFAG00000044424)	ATG9A (ENSMFAG00000037064)
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375.x #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Olive baboon	MODERN SPECIES	1	PNKD (ENSPANG00000005752)	TMBIM1 (ENSPANG00000022974)	CATIP (ENSPANG00000019012)	SLC11A1 (ENSPANG00000012402) #7	CTDSP1 (ENSPANG00000001099) #8	VIL1 (ENSPANG00000005751) #10	USP37 (ENSPANG00000021870) #11	ENSPANG00000010870 #13	ENSPANG00000005493	ENSPANG00000010249 #15	ENSPANG00000020343 #16	ENSPANG00000044497 #18	TTLL4 (ENSPANG00000008977) #19	CYP27A1 (ENSPANG00000004702) #20	PRKAG3 (ENSPANG00000000437) #21	WNT6 (ENSPANG00000022973) #22	WNT10A (ENSPANG00000011987) #23	CDK5R2 (ENSPANG00000009421) #24	FEV (ENSPANG00000017464) #25	CRYBA2 (ENSPANG00000021174) #26	CFAP65 (ENSPANG00000030993) #27	IHH (ENSPANG00000017463) #28	NHEJ1 (ENSPANG00000009814) #29	SLC23A3 (ENSPANG00000011561) #30	CNPPD1 (ENSPANG00000018165) #31	RETREG2 (ENSPANG00000007323) #32	ZFAND2B (ENSPANG00000000725)	ABCB6 (ENSPANG00000020232)	ATG9A (ENSPANG00000017760)	ANKZF1 (ENSPANG00000006511)	GLB1L (ENSPANG00000010201)
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375.x #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Drill	MODERN SPECIES	1431	TMBIM1 (ENSMLEG00000043631)	CATIP (ENSMLEG00000042937)	SLC11A1 (ENSMLEG00000032955) #7	CTDSP1 (ENSMLEG00000023644) #8	VIL1 (ENSMLEG00000044064) #10	USP37 (ENSMLEG00000037749) #11	CNOT9 (ENSMLEG00000035042) #12	PLCD4 (ENSMLEG00000044086) #13	ENSMLEG00000043382 #14	BCS1L (ENSMLEG00000039984) #15	RNF25 (ENSMLEG00000030033) #16	STK36 (ENSMLEG00000033696) #18	TTLL4 (ENSMLEG00000028441) #19	CYP27A1 (ENSMLEG00000034168) #20	PRKAG3 (ENSMLEG00000028317) #21	WNT6 (ENSMLEG00000038159) #22	WNT10A (ENSMLEG00000039687) #23	FEV (ENSMLEG00000035968) #25	CRYBA2 (ENSMLEG00000011664) #26	CFAP65 (ENSMLEG00000035941) #27	IHH (ENSMLEG00000007404) #28	NHEJ1 (ENSMLEG00000029105) #29	SLC23A3 (ENSMLEG00000035579) #30	CNPPD1 (ENSMLEG00000037422) #31	RETREG2 (ENSMLEG00000043066) #32	ZFAND2B (ENSMLEG00000036623)	ABCB6 (ENSMLEG00000040019)	ATG9A (ENSMLEG00000038465)	ANKZF1 (ENSMLEG00000016483)	GLB1L (ENSMLEG00000025721)	STK16 (ENSMLEG00000030990) #33
Sooty mangabey	MODERN SPECIES	663	PNKD (ENSCATG00000041188)	CATIP (ENSCATG00000034319)	SLC11A1 (ENSCATG00000018339) #7	CTDSP1 (ENSCATG00000034995) #8	VIL1 (ENSCATG00000036175) #10	USP37 (ENSCATG00000023935) #11	CNOT9 (ENSCATG00000045348) #12	PLCD4 (ENSCATG00000033628) #13	ZNF142 (ENSCATG00000044960)	BCS1L (ENSCATG00000011743) #15	RNF25 (ENSCATG00000041945) #16	STK36 (ENSCATG00000041467) #18	TTLL4 (ENSCATG00000036114) #19	CYP27A1 (ENSCATG00000021484) #20	PRKAG3 (ENSCATG00000042843) #21	WNT6 (ENSCATG00000034505) #22	WNT10A (ENSCATG00000041079) #23	CDK5R2 (ENSCATG00000021149) #24	FEV (ENSCATG00000042120) #25	CRYBA2 (ENSCATG00000036307) #26	CFAP65 (ENSCATG00000044214) #27	IHH (ENSCATG00000011857) #28	NHEJ1 (ENSCATG00000031316) #29	SLC23A3 (ENSCATG00000032304) #30	CNPPD1 (ENSCATG00000036265) #31	ENSCATG00000038425	ZFAND2B (ENSCATG00000035298)	ABCB6 (ENSCATG00000044148)	ATG9A (ENSCATG00000037370)	ANKZF1 (ENSCATG00000039880)	GLB1L (ENSCATG00000039765)
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225.m #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225.m #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Marmoset	MODERN SPECIES	18	CATIP (ENSCJAG00000010885)	SLC11A1 (ENSCJAG00000010901) #7	VIL1 (ENSCJAG00000010950) #10	USP37 (ENSCJAG00000010983) #11	CNOT9 (ENSCJAG00000011079) #12	PLCD4 (ENSCJAG00000038890) #13	ZNF142 (ENSCJAG00000011145)	BCS1L (ENSCJAG00000011149) #15	RNF25 (ENSCJAG00000011192) #16	STK36 (ENSCJAG00000011237) #18	ENSCJAG00000073749	TTLL4 (ENSCJAG00000011294) #19	CYP27A1 (ENSCJAG00000011342) #20	ENSCJAG00000083160	PRKAG3 (ENSCJAG00000011362) #21	WNT6 (ENSCJAG00000011399) #22	WNT10A (ENSCJAG00000011403) #23	CDK5R2 (ENSCJAG00000084028) #24	FEV (ENSCJAG00000070578) #25	CRYBA2 (ENSCJAG00000011426) #26	CFAP65 (ENSCJAG00000011429) #27	IHH (ENSCJAG00000046454) #28	NHEJ1 (ENSCJAG00000011471) #29	SLC23A3 (ENSCJAG00000011478) #30	CNPPD1 (ENSCJAG00000011492) #31	RETREG2 (ENSCJAG00000046567) #32	ENSCJAG00000047609	ZFAND2B (ENSCJAG00000011503)	ABCB6 (ENSCJAG00000011512)	ATG9A (ENSCJAG00000011523)	ANKZF1 (ENSCJAG00000011574)
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225.m #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Bolivian squirrel monkey	MODERN SPECIES	56	SLC11A1 (ENSSBOG00000035738) #7	CTDSP1 (ENSSBOG00000033449) #8	VIL1 (ENSSBOG00000031003) #10	USP37 (ENSSBOG00000019926) #11	ENSSBOG00000022872 #12	PLCD4 (ENSSBOG00000033997) #13	ZNF142 (ENSSBOG00000024040)	BCS1L (ENSSBOG00000031182) #15	RNF25 (ENSSBOG00000020870) #16	STK36 (ENSSBOG00000032303) #18	TTLL4 (ENSSBOG00000029426) #19	ENSSBOG00000030556	ENSSBOG00000024877	CYP27A1 (ENSSBOG00000035228) #20	PRKAG3 (ENSSBOG00000034985) #21	WNT6 (ENSSBOG00000034349) #22	WNT10A (ENSSBOG00000028713) #23	CDK5R2 (ENSSBOG00000027687) #24	FEV (ENSSBOG00000031391) #25	CRYBA2 (ENSSBOG00000024164) #26	CFAP65 (ENSSBOG00000020612) #27	IHH (ENSSBOG00000018304) #28	NHEJ1 (ENSSBOG00000019236) #29	SLC23A3 (ENSSBOG00000022523) #30	CNPPD1 (ENSSBOG00000024345) #31	RETREG2 (ENSSBOG00000033227) #32	ENSSBOG00000032266	ZFAND2B (ENSSBOG00000026397)	ABCB6 (ENSSBOG00000030728)	ATG9A (ENSSBOG00000028712)	ANKZF1 (ENSSBOG00000022051)
Capuchin	MODERN SPECIES	91	TMBIM1 (ENSCCAG00000037987)	CATIP (ENSCCAG00000029357)	SLC11A1 (ENSCCAG00000036035) #7	CTDSP1 (ENSCCAG00000035606) #8	VIL1 (ENSCCAG00000026608) #10	USP37 (ENSCCAG00000036554) #11	ENSCCAG00000017272 #12	PLCD4 (ENSCCAG00000037074) #13	ZNF142 (ENSCCAG00000025625)	RNF25 (ENSCCAG00000022960) #16	BCS1L (ENSCCAG00000030334) #15	STK36 (ENSCCAG00000028077) #18	TTLL4 (ENSCCAG00000033755) #19	CYP27A1 (ENSCCAG00000021874) #20	PRKAG3 (ENSCCAG00000033243) #21	WNT6 (ENSCCAG00000002129) #22	WNT10A (ENSCCAG00000033457) #23	ENSCCAG00000017356	CDK5R2 (ENSCCAG00000017322) #24	FEV (ENSCCAG00000034592) #25	CRYBA2 (ENSCCAG00000033225) #26	CFAP65 (ENSCCAG00000032465) #27	IHH (ENSCCAG00000036432) #28	NHEJ1 (ENSCCAG00000019786) #29	SLC23A3 (ENSCCAG00000021766) #30	CNPPD1 (ENSCCAG00000022297) #31	RETREG2 (ENSCCAG00000022658) #32	ZFAND2B (ENSCCAG00000036928)	ABCB6 (ENSCCAG00000027179)	ATG9A (ENSCCAG00000020015)	ANKZF1 (ENSCCAG00000028113)
Mas night monkey	MODERN SPECIES	357	PNKD (ENSANAG00000019661)	CATIP (ENSANAG00000035336)	SLC11A1 (ENSANAG00000038479) #7	CTDSP1 (ENSANAG00000033831) #8	VIL1 (ENSANAG00000020565) #10	USP37 (ENSANAG00000031880) #11	ENSANAG00000038509 #12	PLCD4 (ENSANAG00000032428) #13	ZNF142 (ENSANAG00000036961)	BCS1L (ENSANAG00000034542) #15	RNF25 (ENSANAG00000029471) #16	STK36 (ENSANAG00000030567) #18	TTLL4 (ENSANAG00000030178) #19	CYP27A1 (ENSANAG00000034366) #20	PRKAG3 (ENSANAG00000032002) #21	WNT6 (ENSANAG00000026110) #22	WNT10A (ENSANAG00000026652) #23	CDK5R2 (ENSANAG00000013180) #24	FEV (ENSANAG00000022907) #25	CRYBA2 (ENSANAG00000030100) #26	CFAP65 (ENSANAG00000026544) #27	IHH (ENSANAG00000038500) #28	NHEJ1 (ENSANAG00000034155) #29	SLC23A3 (ENSANAG00000031993) #30	CNPPD1 (ENSANAG00000024334) #31	ENSANAG00000025113	ZFAND2B (ENSANAG00000008091)	ABCB6 (ENSANAG00000032665)	ATG9A (ENSANAG00000031038)	ANKZF1 (ENSANAG00000033345)	GLB1L (ENSANAG00000019491)
Tarsier	MODERN SPECIES	4547				CTDSP1 (ENSTSYG00000030290) #8	VIL1 (ENSTSYG00000026232) #10	USP37 (ENSTSYG00000007532) #11	CNOT9 (ENSTSYG00000007671) #12	PLCD4 (ENSTSYG00000007128) #13	ENSTSYG00000007129 #14	BCS1L (ENSTSYG00000007133) #15	RNF25 (ENSTSYG00000026260) #16	STK36 (ENSTSYG00000007141) #18	TTLL4 (ENSTSYG00000010347) #19	CYP27A1 (ENSTSYG00000011317) #20	PRKAG3 (ENSTSYG00000011327) #21	WNT6 (ENSTSYG00000031757) #22	WNT10A (ENSTSYG00000025654) #23	CRYBA2 (ENSTSYG00000013997) #26	CFAP65 (ENSTSYG00000001842) #27	IHH (ENSTSYG00000027903) #28	NHEJ1 (ENSTSYG00000008101) #29	SLC23A3 (ENSTSYG00000008144) #30	CNPPD1 (ENSTSYG00000030043) #31	RETREG2 (ENSTSYG00000029557) #32	ZFAND2B (ENSTSYG00000011643)	ABCB6 (ENSTSYG00000011725)	ATG9A (ENSTSYG00000011740)	ANKZF1 (ENSTSYG00000011747)	GLB1L (ENSTSYG00000011748)	STK16 (ENSTSYG00000011749) #33	TUBA4A (ENSTSYG00000011750) #34
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00940000163279 #14	ENSGT00390000005415.a.a ##15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.a.a ##15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Mouse lemur	MODERN SPECIES	30	PNKD (ENSMICG00000042547)	CATIP (ENSMICG00000027695)	SLC11A1 (ENSMICG00000032402) #7	CTDSP1 (ENSMICG00000033882) #8	VIL1 (ENSMICG00000005119) #10	USP37 (ENSMICG00000005129) #11	CNOT9 (ENSMICG00000005152) #12	PLCD4 (ENSMICG00000005159) #13	ENSMICG00000045688 #14	ENSMICG00000005175 ##15	RNF25 (ENSMICG00000005179) #16	STK36 (ENSMICG00000005186) #18	TTLL4 (ENSMICG00000005204) #19	CYP27A1 (ENSMICG00000006999) #20	PRKAG3 (ENSMICG00000007009) #21	WNT6 (ENSMICG00000045948) #22	WNT10A (ENSMICG00000043872) #23	CDK5R2 (ENSMICG00000007028) #24	FEV (ENSMICG00000047914) #25	CRYBA2 (ENSMICG00000042726) #26	ENSMICG00000007043 #27	IHH (ENSMICG00000026390) #28	NHEJ1 (ENSMICG00000042607) #29	SLC23A3 (ENSMICG00000000765) #30	CNPPD1 (ENSMICG00000000769) #31	ENSMICG00000047782	ZFAND2B (ENSMICG00000000774)	ABCB6 (ENSMICG00000000778)	ATG9A (ENSMICG00000033556)	ANKZF1 (ENSMICG00000000789)	GLB1L (ENSMICG00000000795)
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.a.a ##15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Coquerels sifaka	MODERN SPECIES	259	TMBIM1 (ENSPCOG00000005693)	CATIP (ENSPCOG00000010306)	SLC11A1 (ENSPCOG00000020402) #7	CTDSP1 (ENSPCOG00000020126) #8	VIL1 (ENSPCOG00000002346) #10	USP37 (ENSPCOG00000020172) #11	CNOT9 (ENSPCOG00000026587) #12	PLCD4 (ENSPCOG00000019686) #13	ENSPCOG00000003841 #14	BCS1L (ENSPCOG00000019115) ##15	RNF25 (ENSPCOG00000015285) #16	STK36 (ENSPCOG00000021753) #18	TTLL4 (ENSPCOG00000023937) #19	CYP27A1 (ENSPCOG00000017454) #20	PRKAG3 (ENSPCOG00000020879) #21	WNT6 (ENSPCOG00000016987) #22	WNT10A (ENSPCOG00000027492) #23	CDK5R2 (ENSPCOG00000004726) #24	FEV (ENSPCOG00000026278) #25	CRYBA2 (ENSPCOG00000019254) #26	CFAP65 (ENSPCOG00000022616) #27	IHH (ENSPCOG00000007373) #28	NHEJ1 (ENSPCOG00000026909) #29	SLC23A3 (ENSPCOG00000028411) #30	CNPPD1 (ENSPCOG00000022844) #31	RETREG2 (ENSPCOG00000025318) #32	ZFAND2B (ENSPCOG00000018099)	ABCB6 (ENSPCOG00000028584)	ATG9A (ENSPCOG00000016102)	ANKZF1 (ENSPCOG00000023893)	GLB1L (ENSPCOG00000021121)
Greater bamboo lemur	MODERN SPECIES	286	CATIP (ENSPSMG00000024776)	SLC11A1 (ENSPSMG00000024786) #7	CTDSP1 (ENSPSMG00000024799) #8	VIL1 (ENSPSMG00000024810) #10	ENSPSMG00000024815 #11	ENSPSMG00000024821	CNOT9 (ENSPSMG00000024845) #12	PLCD4 (ENSPSMG00000024883) #13	ENSPSMG00000024891 #14	BCS1L (ENSPSMG00000024908) ##15	RNF25 (ENSPSMG00000024931) #16	STK36 (ENSPSMG00000024959) #18	TTLL4 (ENSPSMG00000025027) #19	CYP27A1 (ENSPSMG00000025068) #20	PRKAG3 (ENSPSMG00000025078) #21	WNT6 (ENSPSMG00000025081) #22	WNT10A (ENSPSMG00000025083) #23	CDK5R2 (ENSPSMG00000025090) #24	FEV (ENSPSMG00000025093) #25	CRYBA2 (ENSPSMG00000025100) #26	ENSPSMG00000025107 #27	IHH (ENSPSMG00000025112) #28	NHEJ1 (ENSPSMG00000025120) #29	SLC23A3 (ENSPSMG00000025130) #30	CNPPD1 (ENSPSMG00000025153) #31	RETREG2 (ENSPSMG00000025165) #32	ZFAND2B (ENSPSMG00000025191)	ABCB6 (ENSPSMG00000025233)	ATG9A (ENSPSMG00000025253)	ANKZF1 (ENSPSMG00000025264)	GLB1L (ENSPSMG00000025277)
Bushbaby	MODERN SPECIES	128	CATIP (ENSOGAG00000004152)	SLC11A1 (ENSOGAG00000004156) #7	CTDSP1 (ENSOGAG00000004159) #8	VIL1 (ENSOGAG00000004160) #10	ENSOGAG00000033815	USP37 (ENSOGAG00000004165) #11	CNOT9 (ENSOGAG00000004173) #12	PLCD4 (ENSOGAG00000004178) #13	ZNF142 (ENSOGAG00000027693)	BCS1L (ENSOGAG00000004183) #15	RNF25 (ENSOGAG00000004184) #16	STK36 (ENSOGAG00000004188) #18	TTLL4 (ENSOGAG00000004192) #19	CYP27A1 (ENSOGAG00000004196) #20	PRKAG3 (ENSOGAG00000004200) #21	WNT6 (ENSOGAG00000014075) #22	WNT10A (ENSOGAG00000024185) #23	CDK5R2 (ENSOGAG00000031192) #24	ENSOGAG00000026329	CRYBA2 (ENSOGAG00000014089) #26	CFAP65 (ENSOGAG00000014092) #27	IHH (ENSOGAG00000014108) #28	NHEJ1 (ENSOGAG00000028496) #29	SLC23A3 (ENSOGAG00000015538) #30	CNPPD1 (ENSOGAG00000015540) #31	ENSOGAG00000028216 #32	ZFAND2B (ENSOGAG00000015541)	ABCB6 (ENSOGAG00000015544)	ATG9A (ENSOGAG00000015549)	ANKZF1 (ENSOGAG00000015554)	GLB1L (ENSOGAG00000015557)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Glires	ANCESTRAL SPECIES	14	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Rodentia	ANCESTRAL SPECIES	14	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Tmbim1 (ENSCGRG00001020249)	Catip (ENSCGRG00001021095)	Slc11a1 (ENSCGRG00001020070) #7	Ctdsp1 (ENSCGRG00001020131) #8	Vil1 (ENSCGRG00001022375) #10	Usp37 (ENSCGRG00001020814) #11	Cnot9 (ENSCGRG00001006914) #12	Plcd4 (ENSCGRG00001019995) #13	ENSCGRG00001020944 #14	Bcs1l (ENSCGRG00001022549) #15	Rnf25 (ENSCGRG00001019945) #16	Stk36 (ENSCGRG00001021047) #18	Ttll4 (ENSCGRG00001020353) #19	Cyp27a1 (ENSCGRG00001022449) #20	Prkag3 (ENSCGRG00001023244) #21	Wnt6 (ENSCGRG00001020412) #22	Wnt10a (ENSCGRG00001021957) #23	Cdk5r2 (ENSCGRG00001010890) #24	Fev (ENSCGRG00001022388) #25	Cryba2 (ENSCGRG00001020857) #26	Cfap65 (ENSCGRG00001021271) #27	Ihh (ENSCGRG00001004911) #28	Nhej1 (ENSCGRG00001020270) #29	Slc23a3 (ENSCGRG00001021979) #30	Cnppd1 (ENSCGRG00001021884) #31	Retreg2 (ENSCGRG00001020316) #32	Zfand2b (ENSCGRG00001023088)	Abcb6 (ENSCGRG00001021485)	Atg9a (ENSCGRG00001020609)	Ankzf1 (ENSCGRG00001003325)	Glb1l (ENSCGRG00001022575)
Golden Hamster	MODERN SPECIES	640	ENSMAUG00000008213	Slc11a1 (ENSMAUG00000011528) #7	Ctdsp1 (ENSMAUG00000004766) #8	Vil1 (ENSMAUG00000001066) #10	Usp37 (ENSMAUG00000020807) #11	Cnot9 (ENSMAUG00000000762) #12	Plcd4 (ENSMAUG00000001125) #13	ENSMAUG00000016846 #14	Bcs1l (ENSMAUG00000016355) #15	ENSMAUG00000019636 #16	ENSMAUG00000009866 #18	ENSMAUG00000018220	Ttll4 (ENSMAUG00000013354) #19	Cyp27a1 (ENSMAUG00000012139) #20	Prkag3 (ENSMAUG00000009130) #21	Wnt6 (ENSMAUG00000001585) #22	Wnt10a (ENSMAUG00000002340) #23	Cdk5r2 (ENSMAUG00000008653) #24	Fev (ENSMAUG00000007309) #25	Cryba2 (ENSMAUG00000009795) #26	Cfap65 (ENSMAUG00000014580) #27	Ihh (ENSMAUG00000014723) #28	Nhej1 (ENSMAUG00000021394) #29	Slc23a3 (ENSMAUG00000012279) #30	ENSMAUG00000016029 #31	Retreg2 (ENSMAUG00000001382) #32	ENSMAUG00000015584	Atg9a (ENSMAUG00000021504)	Glb1l (ENSMAUG00000016945)	Stk16 (ENSMAUG00000020739) #33	Tuba4a (ENSMAUG00000010899) #34
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00930000151420	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Northern American deer mouse	MODERN SPECIES	4	Pnkd (ENSPEMG00000010689)	ENSPEMG00000031268	Slc11a1 (ENSPEMG00000000568) #7	Ctdsp1 (ENSPEMG00000025369) #8	Vil1 (ENSPEMG00000012484) #10	Usp37 (ENSPEMG00000002989) #11	Cnot9 (ENSPEMG00000014045) #12	Plcd4 (ENSPEMG00000016923) #13	Zfp142 (ENSPEMG00000000784)	Bcs1l (ENSPEMG00000009977) #15	Rnf25 (ENSPEMG00000013432) #16	Stk36 (ENSPEMG00000025017) #18	Ttll4 (ENSPEMG00000015183) #19	Cyp27a1 (ENSPEMG00000016775) #20	Prkag3 (ENSPEMG00000015508) #21	Wnt6 (ENSPEMG00000013371) #22	Wnt10a (ENSPEMG00000026915) #23	ENSPEMG00000026703 #24	Fev (ENSPEMG00000030849) #25	Cryba2 (ENSPEMG00000012049) #26	Cfap65 (ENSPEMG00000000225) #27	Ihh (ENSPEMG00000029231) #28	ENSPEMG00000013096 #29	ENSPEMG00000030620	Slc23a3 (ENSPEMG00000005189) #30	Cnppd1 (ENSPEMG00000020339) #31	Retreg2 (ENSPEMG00000010062) #32	Zfand2b (ENSPEMG00000030469)	Abcb6 (ENSPEMG00000009632)	Atg9a (ENSPEMG00000013285)	Ankzf1 (ENSPEMG00000014818)
Prairie vole	MODERN SPECIES	354	Catip (ENSMOCG00000001530)	Slc11a1 (ENSMOCG00000022009) #7	Ctdsp1 (ENSMOCG00000018253) #8	Vil1 (ENSMOCG00000018545) #10	Usp37 (ENSMOCG00000002015) #11	Cnot9 (ENSMOCG00000014736) #12	Plcd4 (ENSMOCG00000007617) #13	ENSMOCG00000009252 #14	Bcs1l (ENSMOCG00000021587) #15	ENSMOCG00000020374 #16	ENSMOCG00000021552 #18	ENSMOCG00000014792	Ttll4 (ENSMOCG00000022947) #19	Cyp27a1 (ENSMOCG00000022721) #20	Prkag3 (ENSMOCG00000002259) #21	Wnt6 (ENSMOCG00000017824) #22	Wnt10a (ENSMOCG00000019338) #23	Cdk5r2 (ENSMOCG00000001322) #24	Fev (ENSMOCG00000007062) #25	Cryba2 (ENSMOCG00000002053) #26	Cfap65 (ENSMOCG00000019421) #27	Ihh (ENSMOCG00000002358) #28	Nhej1 (ENSMOCG00000020976) #29	Slc23a3 (ENSMOCG00000019126) #30	Cnppd1 (ENSMOCG00000017920) #31	Retreg2 (ENSMOCG00000016481) #32	Zfand2b (ENSMOCG00000001276)	ENSMOCG00000021361	Atg9a (ENSMOCG00000013127)	Ankzf1 (ENSMOCG00000006514)	Glb1l (ENSMOCG00000014084)
Murinae	ANCESTRAL SPECIES	9	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Mus	ANCESTRAL SPECIES	5	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Mus_A	ANCESTRAL SPECIES	5	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Mouse	MODERN SPECIES		Tmbim1 (ENSMUSG00000006301)	Catip (ENSMUSG00000073650)	Slc11a1 (ENSMUSG00000026177) #7	Ctdsp1 (ENSMUSG00000026176) #8	Vil1 (ENSMUSG00000026175) #10	Usp37 (ENSMUSG00000033364) #11	Cnot9 (ENSMUSG00000026174) #12	Plcd4 (ENSMUSG00000026173) #13	Zfp142 (ENSMUSG00000026135)	Bcs1l (ENSMUSG00000026172) #15	Rnf25 (ENSMUSG00000026171) #16	Stk36 (ENSMUSG00000033276) #18	Ttll4 (ENSMUSG00000033257) #19	Cyp27a1 (ENSMUSG00000026170) #20	Prkag3 (ENSMUSG00000006542) #21	Wnt6 (ENSMUSG00000033227) #22	Wnt10a (ENSMUSG00000026167) #23	Cdk5r2 (ENSMUSG00000090071) #24	Fev (ENSMUSG00000055197) #25	Cryba2 (ENSMUSG00000006546) #26	Cfap65 (ENSMUSG00000047021) #27	Ihh (ENSMUSG00000006538) #28	Nhej1 (ENSMUSG00000026162) #29	Slc23a3 (ENSMUSG00000026205) #30	Cnppd1 (ENSMUSG00000033159) #31	Retreg2 (ENSMUSG00000049339) #32	Zfand2b (ENSMUSG00000026197)	Abcb6 (ENSMUSG00000026198)	Atg9a (ENSMUSG00000033124)	Ankzf1 (ENSMUSG00000026199)	Glb1l (ENSMUSG00000026200)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
spretus	MODERN SPECIES		Tmbim1 (MGP_SPRETEiJ_G0015065)	Catip (MGP_SPRETEiJ_G0015066)	Slc11a1 (MGP_SPRETEiJ_G0015067) #7	Ctdsp1 (MGP_SPRETEiJ_G0015068) #8	Vil1 (MGP_SPRETEiJ_G0015069) #10	Usp37 (MGP_SPRETEiJ_G0015070) #11	Cnot9 (MGP_SPRETEiJ_G0015071) #12	Plcd4 (MGP_SPRETEiJ_G0015072) #13	Zfp142 (MGP_SPRETEiJ_G0015073)	Bcs1l (MGP_SPRETEiJ_G0015074) #15	Rnf25 (MGP_SPRETEiJ_G0015075) #16	Stk36 (MGP_SPRETEiJ_G0015076) #18	Ttll4 (MGP_SPRETEiJ_G0015077) #19	Cyp27a1 (MGP_SPRETEiJ_G0015078) #20	Prkag3 (MGP_SPRETEiJ_G0015079) #21	Wnt6 (MGP_SPRETEiJ_G0015080) #22	Wnt10a (MGP_SPRETEiJ_G0015081) #23	Cdk5r2 (MGP_SPRETEiJ_G0015082) #24	Fev (MGP_SPRETEiJ_G0015083) #25	Cryba2 (MGP_SPRETEiJ_G0015084) #26	Cfap65 (MGP_SPRETEiJ_G0015085) #27	Ihh (MGP_SPRETEiJ_G0015086) #28	MGP_SPRETEiJ_G0015087 #29	Slc23a3 (MGP_SPRETEiJ_G0015088) #30	Cnppd1 (MGP_SPRETEiJ_G0015089) #31	Retreg2 (MGP_SPRETEiJ_G0015090) #32	Zfand2b (MGP_SPRETEiJ_G0015091)	Abcb6 (MGP_SPRETEiJ_G0015092)	Atg9a (MGP_SPRETEiJ_G0015093)	Ankzf1 (MGP_SPRETEiJ_G0015094)	Glb1l (MGP_SPRETEiJ_G0015095)
Steppe mouse	MODERN SPECIES	3423	Pnkd (ENSMSIG00000019825)	Catip (ENSMSIG00000019768)	Slc11a1 (ENSMSIG00000019682) #7	ENSMSIG00000019634 #8	Vil1 (ENSMSIG00000019586) #10	Cnot9 (ENSMSIG00000019555) #12	Usp37 (ENSMSIG00000019436) #11	Plcd4 (ENSMSIG00000019245) #13	Zfp142 (ENSMSIG00000019187)	Bcs1l (ENSMSIG00000019168) #15	Rnf25 (ENSMSIG00000019133) #16	Stk36 (ENSMSIG00000018889) #18	Ttll4 (ENSMSIG00000018759) #19	Prkag3 (ENSMSIG00000018678) #21	Cyp27a1 (ENSMSIG00000018644) #20	Wnt6 (ENSMSIG00000018613) #22	Wnt10a (ENSMSIG00000018596) #23	Cdk5r2 (ENSMSIG00000018589) #24	Fev (ENSMSIG00000018578) #25	Cryba2 (ENSMSIG00000018560) #26	Cfap65 (ENSMSIG00000018515) #27	Ihh (ENSMSIG00000018493) #28	Nhej1 (ENSMSIG00000018428) #29	Slc23a3 (ENSMSIG00000018400) #30	Cnppd1 (ENSMSIG00000018370) #31	ENSMSIG00000018356	Zfand2b (ENSMSIG00000018332)	Abcb6 (ENSMSIG00000018307)	Atg9a (ENSMSIG00000018273)	Ankzf1 (ENSMSIG00000018229)	Glb1l (ENSMSIG00000018199)
Ryukyu mouse	MODERN SPECIES		Tmbim1 (MGP_CAROLIEiJ_G0014259)	Catip (MGP_CAROLIEiJ_G0014260)	Slc11a1 (MGP_CAROLIEiJ_G0014261) #7	Ctdsp1 (MGP_CAROLIEiJ_G0014262) #8	Vil1 (MGP_CAROLIEiJ_G0014263) #10	Usp37 (MGP_CAROLIEiJ_G0014264) #11	Cnot9 (MGP_CAROLIEiJ_G0014265) #12	Plcd4 (MGP_CAROLIEiJ_G0014266) #13	Zfp142 (MGP_CAROLIEiJ_G0014267)	Bcs1l (MGP_CAROLIEiJ_G0014268) #15	Rnf25 (MGP_CAROLIEiJ_G0014269) #16	Stk36 (MGP_CAROLIEiJ_G0014270) #18	Ttll4 (MGP_CAROLIEiJ_G0014271) #19	Cyp27a1 (MGP_CAROLIEiJ_G0014272) #20	Prkag3 (MGP_CAROLIEiJ_G0014273) #21	Wnt6 (MGP_CAROLIEiJ_G0014274) #22	Wnt10a (MGP_CAROLIEiJ_G0014275) #23	Cdk5r2 (MGP_CAROLIEiJ_G0014276) #24	Fev (MGP_CAROLIEiJ_G0014277) #25	Cryba2 (MGP_CAROLIEiJ_G0014278) #26	Cfap65 (MGP_CAROLIEiJ_G0014279) #27	Ihh (MGP_CAROLIEiJ_G0014280) #28	MGP_CAROLIEiJ_G0014281 #29	Slc23a3 (MGP_CAROLIEiJ_G0014282) #30	Cnppd1 (MGP_CAROLIEiJ_G0014283) #31	Retreg2 (MGP_CAROLIEiJ_G0014284) #32	Zfand2b (MGP_CAROLIEiJ_G0014285)	Abcb6 (MGP_CAROLIEiJ_G0014286)	Atg9a (MGP_CAROLIEiJ_G0014287)	Ankzf1 (MGP_CAROLIEiJ_G0014288)	Glb1l (MGP_CAROLIEiJ_G0014289)
Shrew mouse	MODERN SPECIES	18	Tmbim1 (MGP_PahariEiJ_G0027497)	MGP_PahariEiJ_G0027498	Slc11a1 (MGP_PahariEiJ_G0027499) #7	Ctdsp1 (MGP_PahariEiJ_G0027500) #8	Vil1 (MGP_PahariEiJ_G0027501) #10	Usp37 (MGP_PahariEiJ_G0027502) #11	Cnot9 (MGP_PahariEiJ_G0027503) #12	Plcd4 (MGP_PahariEiJ_G0027504) #13	Zfp142 (MGP_PahariEiJ_G0027505)	Bcs1l (MGP_PahariEiJ_G0027506) #15	Rnf25 (MGP_PahariEiJ_G0027507) #16	Stk36 (MGP_PahariEiJ_G0027508) #18	Ttll4 (MGP_PahariEiJ_G0027509) #19	Cyp27a1 (MGP_PahariEiJ_G0027510) #20	Prkag3 (MGP_PahariEiJ_G0027511) #21	Wnt6 (MGP_PahariEiJ_G0027512) #22	Wnt10a (MGP_PahariEiJ_G0027513) #23	Cdk5r2 (MGP_PahariEiJ_G0027514) #24	Fev (MGP_PahariEiJ_G0027515) #25	Cryba2 (MGP_PahariEiJ_G0027516) #26	Cfap65 (MGP_PahariEiJ_G0027517) #27	Ihh (MGP_PahariEiJ_G0027518) #28	MGP_PahariEiJ_G0027519 #29	Slc23a3 (MGP_PahariEiJ_G0027520) #30	Cnppd1 (MGP_PahariEiJ_G0027521) #31	Retreg2 (MGP_PahariEiJ_G0027522) #32	Zfand2b (MGP_PahariEiJ_G0027523)	Abcb6 (MGP_PahariEiJ_G0027524)	Atg9a (MGP_PahariEiJ_G0027525)	Ankzf1 (MGP_PahariEiJ_G0027526)	Glb1l (MGP_PahariEiJ_G0027527)
Rat	MODERN SPECIES	19	Catip (ENSRNOG00000037835)	Slc11a1 (ENSRNOG00000014956) #7	Ctdsp1 (ENSRNOG00000015295) #8	Vil1 (ENSRNOG00000015408) #10	Usp37 (ENSRNOG00000022720) #11	Cnot9 (ENSRNOG00000016034) #12	Plcd4 (ENSRNOG00000016361) #13	Zfp142 (ENSRNOG00000022414)	Bcs1l (ENSRNOG00000016754) #15	Rnf25 (ENSRNOG00000016886) #16	Stk36 (ENSRNOG00000016913) #18	Ttll4 (ENSRNOG00000017129) #19	Cyp27a1 (ENSRNOG00000017188) #20	Prkag3 (ENSRNOG00000017248) #21	ENSRNOG00000067128	Wnt6 (ENSRNOG00000017409) #22	Wnt10a (ENSRNOG00000052510) #23	AC132020.1 (ENSRNOG00000017757)	Cdk5r2 (ENSRNOG00000037793) #24	Fev (ENSRNOG00000017856) #25	Cryba2 (ENSRNOG00000017996) #26	Cfap65 (ENSRNOG00000056996) #27	Ihh (ENSRNOG00000018059) #28	Nhej1 (ENSRNOG00000018162) #29	AABR07068084.1 (ENSRNOG00000032518)	Slc23a3 (ENSRNOG00000018266) #30	Cnppd1 (ENSRNOG00000018325) #31	Retreg2 (ENSRNOG00000018586) #32	Zfand2b (ENSRNOG00000018639)	Abcb6 (ENSRNOG00000018697)	Atg9a (ENSRNOG00000018975)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1887	Catip (ENSNGAG00000022604)	Slc11a1 (ENSNGAG00000022820) #7	Ctdsp1 (ENSNGAG00000008784) #8	Vil1 (ENSNGAG00000007441) #10	Usp37 (ENSNGAG00000021253) #11	Cnot9 (ENSNGAG00000013140) #12	Plcd4 (ENSNGAG00000023913) #13	ENSNGAG00000023768 #14	Bcs1l (ENSNGAG00000019095) #15	ENSNGAG00000023854 #16	ENSNGAG00000016725 #18	ENSNGAG00000013118	Ttll4 (ENSNGAG00000020292) #19	Cyp27a1 (ENSNGAG00000023395) #20	Prkag3 (ENSNGAG00000007920) #21	Wnt6 (ENSNGAG00000021793) #22	Wnt10a (ENSNGAG00000024234) #23	Cdk5r2 (ENSNGAG00000001353) #24	Fev (ENSNGAG00000022934) #25	Cryba2 (ENSNGAG00000006988) #26	ENSNGAG00000001188 #27	ENSNGAG00000005830	Ihh (ENSNGAG00000023757) #28	Nhej1 (ENSNGAG00000000943) #29	Slc23a3 (ENSNGAG00000005244) #30	ENSNGAG00000015911 #31	Retreg2 (ENSNGAG00000017958) #32	Zfand2b (ENSNGAG00000022561)	Abcb6 (ENSNGAG00000014016)	Atg9a (ENSNGAG00000012136)	Ankzf1 (ENSNGAG00000023378)
Lesser Egyptian jerboa	MODERN SPECIES	95	Gpbar1 (ENSJJAG00000000711)	Pnkd (ENSJJAG00000023559)	ENSJJAG00000000751	Slc11a1 (ENSJJAG00000018654) #7	Vil1 (ENSJJAG00000017015) #10	Usp37 (ENSJJAG00000012891) #11	ENSJJAG00000001130 #12	Plcd4 (ENSJJAG00000015778) #13	Zfp142 (ENSJJAG00000021558)	Bcs1l (ENSJJAG00000015901) #15	ENSJJAG00000015098 #16	ENSJJAG00000011828 #18	ENSJJAG00000022770	Ttll4 (ENSJJAG00000022044) #19	Cyp27a1 (ENSJJAG00000016498) #20	Wnt6 (ENSJJAG00000020656) #22	Wnt10a (ENSJJAG00000019142) #23	ENSJJAG00000018657 #24	Fev (ENSJJAG00000014165) #25	Cryba2 (ENSJJAG00000012188) #26	Cfap65 (ENSJJAG00000021817) #27	Ihh (ENSJJAG00000005159) #28	ENSJJAG00000021485 #29	Slc23a3 (ENSJJAG00000014948) #30	Cnppd1 (ENSJJAG00000019086) #31	Retreg2 (ENSJJAG00000020986) #32	Zfand2b (ENSJJAG00000018956)	Abcb6 (ENSJJAG00000021206)	Atg9a (ENSJJAG00000010073)	Ankzf1 (ENSJJAG00000015085)	Glb1l (ENSJJAG00000000273)
Kangaroo rat	MODERN SPECIES	320	Tmbim1 (ENSDORG00000016111)	Slc11a1 (ENSDORG00000010936) #7	Ctdsp1 (ENSDORG00000028537) #8	Vil1 (ENSDORG00000014838) #10	Usp37 (ENSDORG00000014842) #11	Cnot9 (ENSDORG00000029243) #12	Plcd4 (ENSDORG00000004704) #13	ENSDORG00000004707 #14	Bcs1l (ENSDORG00000004709) #15	ENSDORG00000004710 #16	ENSDORG00000023301 #18	ENSDORG00000028722	Ttll4 (ENSDORG00000008314) #19	Cyp27a1 (ENSDORG00000014138) #20	Prkag3 (ENSDORG00000025509) #21	Wnt6 (ENSDORG00000005721) #22	Wnt10a (ENSDORG00000005722) #23	ENSDORG00000024930 #24	Cryba2 (ENSDORG00000002775) #26	Cfap65 (ENSDORG00000002777) #27	Ihh (ENSDORG00000008874) #28	Nhej1 (ENSDORG00000008876) #29	Slc23a3 (ENSDORG00000008878) #30	Cnppd1 (ENSDORG00000030060) #31	Retreg2 (ENSDORG00000008882) #32	Zfand2b (ENSDORG00000000133)	Abcb6 (ENSDORG00000000140)	Atg9a (ENSDORG00000000146)	Ankzf1 (ENSDORG00000000149)	ENSDORG00000000150	Stk16 (ENSDORG00000000152) #33
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916.c #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	32	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916.c #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Guinea pig	MODERN SPECIES	89						USP37 (ENSCPOG00000015117) #11	CNOT9 (ENSCPOG00000038715) #12	PLCD4 (ENSCPOG00000015123) #13	ENSCPOG00000002539 #14	BCS1L (ENSCPOG00000002544) #15	ENSCPOG00000002546 #16	STK36 (ENSCPOG00000002553) #18	TTLL4 (ENSCPOG00000002562) #19	CYP27A1 (ENSCPOG00000001403) #20	PRKAG3 (ENSCPOG00000025222) #21	WNT6 (ENSCPOG00000031683) #22	WNT10A (ENSCPOG00000036720) #23	ENSCPOG00000031234 #24	FEV (ENSCPOG00000021229) #25	CRYBA2 (ENSCPOG00000009130) #26	CFAP65 (ENSCPOG00000015251) #27	IHH (ENSCPOG00000031896) #28	NHEJ1 (ENSCPOG00000023981) #29	SLC23A3 (ENSCPOG00000009623) #30	CNPPD1 (ENSCPOG00000037547) #31	RETREG2 (ENSCPOG00000004582) #32	ZFAND2B (ENSCPOG00000004584)	ABCB6 (ENSCPOG00000004587)	ATG9A (ENSCPOG00000025686)	ANKZF1 (ENSCPOG00000004593)	GLB1L (ENSCPOG00000004595)
Hystricomorpha_b	ANCESTRAL SPECIES	28	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916.c #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Long-tailed chinchilla	MODERN SPECIES	160	PNKD (ENSCLAG00000012048)	CATIP (ENSCLAG00000013420)	SLC11A1 (ENSCLAG00000012795) #7	CTDSP1 (ENSCLAG00000014330) #8	VIL1 (ENSCLAG00000008436) #10	USP37 (ENSCLAG00000007725) #11	CNOT9 (ENSCLAG00000013219) #12	PLCD4 (ENSCLAG00000008034) #13	ENSCLAG00000011769 #14	BCS1L (ENSCLAG00000014008) #15	RNF25 (ENSCLAG00000012866) #16	STK36 (ENSCLAG00000016247) #18	ENSCLAG00000007759 #19	CYP27A1 (ENSCLAG00000008414) #20	PRKAG3 (ENSCLAG00000009025) #21	WNT6 (ENSCLAG00000008099) #22	WNT10A (ENSCLAG00000009082) #23	CDK5R2 (ENSCLAG00000008214) #24	FEV (ENSCLAG00000007374) #25	CRYBA2 (ENSCLAG00000007468) #26	CFAP65 (ENSCLAG00000008296) #27	IHH (ENSCLAG00000008837) #28	NHEJ1 (ENSCLAG00000010456) #29	SLC23A3 (ENSCLAG00000012377) #30	CNPPD1 (ENSCLAG00000011643) #31	RETREG2 (ENSCLAG00000009980) #32	ZFAND2B (ENSCLAG00000008639)	ABCB6 (ENSCLAG00000009060)	ATG9A (ENSCLAG00000008533)	ANKZF1 (ENSCLAG00000008961)	GLB1L (ENSCLAG00000007592)
Degu	MODERN SPECIES	137	VIL1 (ENSODEG00000009742) #10	ENSODEG00000009384	ENSODEG00000006228	USP37 (ENSODEG00000006571) #11	ENSODEG00000007185 #12	PLCD4 (ENSODEG00000009216) #13	ENSODEG00000006310 #14	ENSODEG00000008977 ##15	ENSODEG00000008204 #16	ENSODEG00000006989 #18	ENSODEG00000010583	ENSODEG00000010088	TTLL4 (ENSODEG00000008937) #19	CYP27A1 (ENSODEG00000006917) #20	PRKAG3 (ENSODEG00000007789) #21	WNT6 (ENSODEG00000006363) #22	WNT10A (ENSODEG00000005957) #23	CDK5R2 (ENSODEG00000019819) #24	FEV (ENSODEG00000008014) #25	CRYBA2 (ENSODEG00000007929) #26	CFAP65 (ENSODEG00000008327) #27	IHH (ENSODEG00000006698) #28	ENSODEG00000005977 #29	SLC23A3 (ENSODEG00000007227) #30	CNPPD1 (ENSODEG00000006063) #31	RETREG2 (ENSODEG00000007657) #32	ZFAND2B (ENSODEG00000006890)	ABCB6 (ENSODEG00000006250)	ATG9A (ENSODEG00000009070)	ENSODEG00000006254	ENSODEG00000006309
Naked mole-rat female	MODERN SPECIES	17	SLC11A1 (ENSHGLG00000016083) #7	CTDSP1 (ENSHGLG00000048012) #8	VIL1 (ENSHGLG00000013203) #10	USP37 (ENSHGLG00000013897) #11	CNOT9 (ENSHGLG00000016743) #12	PLCD4 (ENSHGLG00000008143) #13	ENSHGLG00000010262 #14	BCS1L (ENSHGLG00000008703) #15	RNF25 (ENSHGLG00000007383) #16	STK36 (ENSHGLG00000016143) #18	TTLL4 (ENSHGLG00000015642) #19	ENSHGLG00000012335	CYP27A1 (ENSHGLG00000013105) #20	ENSHGLG00000042292	PRKAG3 (ENSHGLG00000018906) #21	WNT6 (ENSHGLG00000008425) #22	WNT10A (ENSHGLG00000006038) #23	ENSHGLG00000042473	CDK5R2 (ENSHGLG00000020594) #24	FEV (ENSHGLG00000049169) #25	ENSHGLG00000017973 #26	CFAP65 (ENSHGLG00000015698) #27	IHH (ENSHGLG00000037115) #28	NHEJ1 (ENSHGLG00000018120) #29	SLC23A3 (ENSHGLG00000015164) #30	CNPPD1 (ENSHGLG00000017860) #31	RETREG2 (ENSHGLG00000012620) #32	ZFAND2B (ENSHGLG00000017806)	ABCB6 (ENSHGLG00000018842)	ANKZF1 (ENSHGLG00000019538)	ATG9A (ENSHGLG00000014975)
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000154101.a	ENSGT00910000148620.e	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Marmotini_b	ANCESTRAL SPECIES	71	ENSGT00940000154690.nb	ENSGT00910000148620.e	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Arctic ground squirrel	MODERN SPECIES	76	ENSUPAG00010011825	ENSUPAG00010011830	SLC11A1 (ENSUPAG00010011835) #7	CTDSP1 (ENSUPAG00010011867) #8	VIL1 (ENSUPAG00010012061) #10	USP37 (ENSUPAG00010012094) #11	CNOT9 (ENSUPAG00010012221) #12	PLCD4 (ENSUPAG00010012230) #13	ENSUPAG00010012261 #14	BCS1L (ENSUPAG00010012288) #15	RNF25 (ENSUPAG00010012304) #16	STK36 (ENSUPAG00010012312) #18	TTLL4 (ENSUPAG00010012373) #19	CYP27A1 (ENSUPAG00010012425) #20	PRKAG3 (ENSUPAG00010012438) #21	WNT6 (ENSUPAG00010012502) #22	WNT10A (ENSUPAG00010012507) #23	CDK5R2 (ENSUPAG00010012510) #24	FEV (ENSUPAG00010012515) #25	CRYBA2 (ENSUPAG00010012524) #26	CFAP65 (ENSUPAG00010012541) #27	IHH (ENSUPAG00010012634) #28	NHEJ1 (ENSUPAG00010012641) #29	SLC23A3 (ENSUPAG00010012663) #30	CNPPD1 (ENSUPAG00010012676) #31	ENSUPAG00010012690	ZFAND2B (ENSUPAG00010012706)	ABCB6 (ENSUPAG00010012726)	ATG9A (ENSUPAG00010012767)	ANKZF1 (ENSUPAG00010012803)	GLB1L (ENSUPAG00010012811)
Squirrel	MODERN SPECIES	169	PNKD (ENSSTOG00000024593)	TMBIM1 (ENSSTOG00000029052)	SLC11A1 (ENSSTOG00000004571) #7	CTDSP1 (ENSSTOG00000008434) #8	VIL1 (ENSSTOG00000026327) #10	USP37 (ENSSTOG00000014934) #11	CNOT9 (ENSSTOG00000014954) #12	PLCD4 (ENSSTOG00000006406) #13	ENSSTOG00000020993 #14	BCS1L (ENSSTOG00000006465) #15	RNF25 (ENSSTOG00000006486) #16	STK36 (ENSSTOG00000006509) #18	TTLL4 (ENSSTOG00000006562) #19	CYP27A1 (ENSSTOG00000006612) #20	PRKAG3 (ENSSTOG00000006628) #21	WNT6 (ENSSTOG00000006654) #22	WNT10A (ENSSTOG00000026725) #23	ENSSTOG00000022853	CDK5R2 (ENSSTOG00000025038) #24	FEV (ENSSTOG00000020252) #25	CRYBA2 (ENSSTOG00000009326) #26	ENSSTOG00000009331 #27	IHH (ENSSTOG00000027440) #28	NHEJ1 (ENSSTOG00000022820) #29	SLC23A3 (ENSSTOG00000009384) #30	CNPPD1 (ENSSTOG00000009401) #31	RETREG2 (ENSSTOG00000025849) #32	ZFAND2B (ENSSTOG00000011063)	ABCB6 (ENSSTOG00000011066)	ATG9A (ENSSTOG00000023078)	ENSSTOG00000030606
Alpin marmot	MODERN SPECIES	8	CATIP (ENSMMMG00000018380)	ENSMMMG00000018388	SLC11A1 (ENSMMMG00000018412) #7	CTDSP1 (ENSMMMG00000019536) #8	VIL1 (ENSMMMG00000019546) #10	USP37 (ENSMMMG00000019560) #11	CNOT9 (ENSMMMG00000019612) #12	PLCD4 (ENSMMMG00000019618) #13	ZNF142 (ENSMMMG00000019653)	BCS1L (ENSMMMG00000019672) #15	RNF25 (ENSMMMG00000019685) #16	STK36 (ENSMMMG00000019701) #18	TTLL4 (ENSMMMG00000019755) #19	CYP27A1 (ENSMMMG00000019807) #20	PRKAG3 (ENSMMMG00000019814) #21	WNT6 (ENSMMMG00000019844) #22	WNT10A (ENSMMMG00000019849) #23	FEV (ENSMMMG00000019852) #25	CRYBA2 (ENSMMMG00000019854) #26	CFAP65 (ENSMMMG00000019864) #27	IHH (ENSMMMG00000019944) #28	NHEJ1 (ENSMMMG00000019945) #29	SLC23A3 (ENSMMMG00000019955) #30	CNPPD1 (ENSMMMG00000019961) #31	RETREG2 (ENSMMMG00000019980) #32	ZFAND2B (ENSMMMG00000019993)	ABCB6 (ENSMMMG00000020000)	ATG9A (ENSMMMG00000020023)	ANKZF1 (ENSMMMG00000020070)	GLB1L (ENSMMMG00000020077)	STK16 (ENSMMMG00000020447) #33
Eurasian red squirrel	MODERN SPECIES	12	CATIP (ENSSVLG00005011352)	SLC11A1 (ENSSVLG00005011497) #7	CTDSP1 (ENSSVLG00005011687) #8	VIL1 (ENSSVLG00005011808) #10	USP37 (ENSSVLG00005012174) #11	CNOT9 (ENSSVLG00005012291) #12	PLCD4 (ENSSVLG00005012386) #13	ENSSVLG00005012744 #14	BCS1L (ENSSVLG00005012862) #15	RNF25 (ENSSVLG00005012906) #16	STK36 (ENSSVLG00005012970) #18	TTLL4 (ENSSVLG00005013389) #19	ENSSVLG00005013536	CYP27A1 (ENSSVLG00005013581) #20	PRKAG3 (ENSSVLG00005013746) #21	WNT6 (ENSSVLG00005013835) #22	WNT10A (ENSSVLG00005013864) #23	CDK5R2 (ENSSVLG00005013909) #24	FEV (ENSSVLG00005013940) #25	CRYBA2 (ENSSVLG00005014007) #26	CFAP65 (ENSSVLG00005014142) #27	IHH (ENSSVLG00005014629) #28	NHEJ1 (ENSSVLG00005014689) #29	ENSSVLG00005014735	SLC23A3 (ENSSVLG00005014807) #30	CNPPD1 (ENSSVLG00005015098) #31	ENSSVLG00005015144	ZFAND2B (ENSSVLG00005015187)	ABCB6 (ENSSVLG00005015299)	ATG9A (ENSSVLG00005015521)	ANKZF1 (ENSSVLG00005015600)
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00940000163279 #14	ENSGT00390000005415.b #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00550000075037 #33	ENSGT00950000183165.a #34
Rabbit	MODERN SPECIES	18	PNKD (ENSOCUG00000016574)	TMBIM1 (ENSOCUG00000005524)	CATIP (ENSOCUG00000012413)	SLC11A1 (ENSOCUG00000016027) #7	VIL1 (ENSOCUG00000027685) #10	USP37 (ENSOCUG00000012513) #11	CNOT9 (ENSOCUG00000001981) #12	PLCD4 (ENSOCUG00000001986) #13	ENSOCUG00000001998 #14	BCS1L (ENSOCUG00000002003) #15	RNF25 (ENSOCUG00000020986) #16	STK36 (ENSOCUG00000002008) #18	TTLL4 (ENSOCUG00000023236) #19	CYP27A1 (ENSOCUG00000003377) #20	PRKAG3 (ENSOCUG00000003384) #21	WNT6 (ENSOCUG00000024007) #22	WNT10A (ENSOCUG00000016033) #23	FEV (ENSOCUG00000021953) #25	CRYBA2 (ENSOCUG00000000206) #26	CFAP65 (ENSOCUG00000000208) #27	IHH (ENSOCUG00000028137) #28	ENSOCUG00000015083 #29	RETREG2 (ENSOCUG00000015088) #32	ZFAND2B (ENSOCUG00000015096)	ABCB6 (ENSOCUG00000015103)	ATG9A (ENSOCUG00000015120)	ANKZF1 (ENSOCUG00000015131)	GLB1L (ENSOCUG00000015139)	STK16 (ENSOCUG00000027721) #33	TUBA4A (ENSOCUG00000026994) #34	ENSOCUG00000015148
Pika	MODERN SPECIES	1359															CYP27A1 (ENSOPRG00000011532) #20	WNT6 (ENSOPRG00000011556) #22	WNT10A (ENSOPRG00000011562) #23
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Suina	ANCESTRAL SPECIES	3	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Chacoan peccary	MODERN SPECIES	940	PNKD (ENSCWAG00000004749)	CATIP (ENSCWAG00000004673)	SLC11A1 (ENSCWAG00000004603) #7	CTDSP1 (ENSCWAG00000004574) #8	VIL1 (ENSCWAG00000004429) #10	USP37 (ENSCWAG00000020257) #11	CNOT9 (ENSCWAG00000020235) #12	PLCD4 (ENSCWAG00000020155) #13	ENSCWAG00000020124 #14	BCS1L (ENSCWAG00000020111) #15	RNF25 (ENSCWAG00000020094) #16	STK36 (ENSCWAG00000020071) #18	TTLL4 (ENSCWAG00000019882) #19	CYP27A1 (ENSCWAG00000019842) #20	PRKAG3 (ENSCWAG00000019794) #21	WNT6 (ENSCWAG00000019766) #22	WNT10A (ENSCWAG00000019744) #23	CDK5R2 (ENSCWAG00000019736) #24	FEV (ENSCWAG00000019728) #25	CRYBA2 (ENSCWAG00000019713) #26	CFAP65 (ENSCWAG00000019572) #27	IHH (ENSCWAG00000019532) #28	NHEJ1 (ENSCWAG00000019486) #29	SLC23A3 (ENSCWAG00000019284) #30	CNPPD1 (ENSCWAG00000019251) #31	RETREG2 (ENSCWAG00000019237) #32	ZFAND2B (ENSCWAG00000019180)	ABCB6 (ENSCWAG00000019049)	ATG9A (ENSCWAG00000018998)	ANKZF1 (ENSCWAG00000018914)	GLB1L (ENSCWAG00000018863)
Pig	MODERN SPECIES	6	PNKD (ENSSSCG00000029002)	CATIP (ENSSSCG00000016187)	SLC11A1 (ENSSSCG00000039798) #7	CTDSP1 (ENSSSCG00000036938) #8	VIL1 (ENSSSCG00000016196) #10	USP37 (ENSSSCG00000016194) #11	CNOT9 (ENSSSCG00000016193) #12	PLCD4 (ENSSSCG00000016192) #13	ENSSSCG00000016191 #14	BCS1L (ENSSSCG00000035775) #15	RNF25 (ENSSSCG00000016202) #16	STK36 (ENSSSCG00000026964) #18	TTLL4 (ENSSSCG00000016201) #19	CYP27A1 (ENSSSCG00000016199) #20	PRKAG3 (ENSSSCG00000016200) #21	WNT6 (ENSSSCG00000036932) #22	WNT10A (ENSSSCG00000026958) #23	CDK5R2 (ENSSSCG00000059789) #24	FEV (ENSSSCG00000035988) #25	CRYBA2 (ENSSSCG00000040776) #26	CFAP65 (ENSSSCG00000016203) #27	IHH (ENSSSCG00000016204) #28	NHEJ1 (ENSSSCG00000016205) #29	SLC23A3 (ENSSSCG00000029694) #30	CNPPD1 (ENSSSCG00000016206) #31	RETREG2 (ENSSSCG00000016207) #32	ZFAND2B (ENSSSCG00000016208)	ABCB6 (ENSSSCG00000016210)	ATG9A (ENSSSCG00000016211)	ANKZF1 (ENSSSCG00000016212)	GLB1L (ENSSSCG00000016213)
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Cetacea	ANCESTRAL SPECIES	14	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Odontoceti	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Monodontidae	ANCESTRAL SPECIES	10	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00990000213068	ENSGT00950000182942.a.b
Narwhal	MODERN SPECIES	302	PNKD (ENSMMNG00015006301)	CATIP (ENSMMNG00015006268)	SLC11A1 (ENSMMNG00015006247) #7	CTDSP1 (ENSMMNG00015006213) #8	VIL1 (ENSMMNG00015006174) #10	USP37 (ENSMMNG00015006111) #11	CNOT9 (ENSMMNG00015006070) #12	PLCD4 (ENSMMNG00015006009) #13	ENSMMNG00015005968 #14	BCS1L (ENSMMNG00015005949) #15	RNF25 (ENSMMNG00015005924) #16	STK36 (ENSMMNG00015005870) #18	TTLL4 (ENSMMNG00015005749) #19	CYP27A1 (ENSMMNG00015005674) #20	PRKAG3 (ENSMMNG00015005637) #21	WNT6 (ENSMMNG00015005610) #22	WNT10A (ENSMMNG00015005592) #23	CDK5R2 (ENSMMNG00015005580) #24	FEV (ENSMMNG00015005567) #25	CRYBA2 (ENSMMNG00015005549) #26	CFAP65 (ENSMMNG00015005484) #27	IHH (ENSMMNG00015005455) #28	NHEJ1 (ENSMMNG00015005440) #29	SLC23A3 (ENSMMNG00015005390) #30	CNPPD1 (ENSMMNG00015005357) #31	RETREG2 (ENSMMNG00015005333) #32	ZFAND2B (ENSMMNG00015005310)	ABCB6 (ENSMMNG00015005232)	ATG9A (ENSMMNG00015005188)	ENSMMNG00015005174	ENSMMNG00015005169
Beluga whale	MODERN SPECIES	84	TMBIM1 (ENSDLEG00000011997)	CATIP (ENSDLEG00000012018)	SLC11A1 (ENSDLEG00000012093) #7	CTDSP1 (ENSDLEG00000016713) #8	VIL1 (ENSDLEG00000016736) #10	USP37 (ENSDLEG00000016872) #11	CNOT9 (ENSDLEG00000016927) #12	PLCD4 (ENSDLEG00000016975) #13	ZNF142 (ENSDLEG00000017809) #14	BCS1L (ENSDLEG00000017902) #15	RNF25 (ENSDLEG00000017931) #16	STK36 (ENSDLEG00000018011) #18	TTLL4 (ENSDLEG00000018443) #19	CYP27A1 (ENSDLEG00000018796) #20	PRKAG3 (ENSDLEG00000018828) #21	WNT6 (ENSDLEG00000018852) #22	WNT10A (ENSDLEG00000018857) #23	CDK5R2 (ENSDLEG00000018862) #24	FEV (ENSDLEG00000018865) #25	CRYBA2 (ENSDLEG00000018870) #26	CFAP65 (ENSDLEG00000018889) #27	IHH (ENSDLEG00000018943) #28	NHEJ1 (ENSDLEG00000018950) #29	SLC23A3 (ENSDLEG00000018960) #30	CNPPD1 (ENSDLEG00000018979) #31	RETREG2 (ENSDLEG00000018990) #32	ZFAND2B (ENSDLEG00000018999)	ABCB6 (ENSDLEG00000019026)	ATG9A (ENSDLEG00000019049)	ENSDLEG00000019057	GLB1L (ENSDLEG00000019064)
Vaquita	MODERN SPECIES	18	CATIP (ENSPSNG00000013342)	SLC11A1 (ENSPSNG00000013161) #7	CTDSP1 (ENSPSNG00000013075) #8	VIL1 (ENSPSNG00000012747) #10	USP37 (ENSPSNG00000012626) #11	CNOT9 (ENSPSNG00000012552) #12	PLCD4 (ENSPSNG00000012217) #13	ENSPSNG00000012152 #14	ENSPSNG00000012088	BCS1L (ENSPSNG00000012039) #15	RNF25 (ENSPSNG00000011955) #16	STK36 (ENSPSNG00000011860) #18	TTLL4 (ENSPSNG00000011722) #19	CYP27A1 (ENSPSNG00000011602) #20	PRKAG3 (ENSPSNG00000011370) #21	WNT6 (ENSPSNG00000011297) #22	WNT10A (ENSPSNG00000011245) #23	CDK5R2 (ENSPSNG00000011232) #24	FEV (ENSPSNG00000011170) #25	CRYBA2 (ENSPSNG00000011122) #26	CFAP65 (ENSPSNG00000010593) #27	IHH (ENSPSNG00000010524) #28	NHEJ1 (ENSPSNG00000010446) #29	SLC23A3 (ENSPSNG00000010037) #30	CNPPD1 (ENSPSNG00000009927) #31	RETREG2 (ENSPSNG00000009864) #32	ZFAND2B (ENSPSNG00000009774)	ABCB6 (ENSPSNG00000009668)	ATG9A (ENSPSNG00000019260)	ENSPSNG00000019067	GLB1L (ENSPSNG00000018947)
Dolphin	MODERN SPECIES	464														CYP27A1 (ENSTTRG00000009953) #20	PRKAG3 (ENSTTRG00000009964) #21	WNT6 (ENSTTRG00000009979) #22	WNT10A (ENSTTRG00000009985) #23	FEV (ENSTTRG00000009999) #25	CRYBA2 (ENSTTRG00000010005) #26	CFAP65 (ENSTTRG00000010011) #27	IHH (ENSTTRG00000010019) #28	NHEJ1 (ENSTTRG00000010020) #29	SLC23A3 (ENSTTRG00000010021) #30	CNPPD1 (ENSTTRG00000010023) #31	RETREG2 (ENSTTRG00000010026) #32	ZFAND2B (ENSTTRG00000010029)	ABCB6 (ENSTTRG00000010031)	ATG9A (ENSTTRG00000010033)	ANKZF1 (ENSTTRG00000010036)	GLB1L (ENSTTRG00000010038)	STK16 (ENSTTRG00000010041) #33
Sperm whale	MODERN SPECIES	11	TNP1 (ENSPCTG00005017658)	ENSPCTG00005017699	ENSPCTG00005017711	ENSPCTG00005017764	PNKD (ENSPCTG00005017792)	VIL1 (ENSPCTG00005017833) #10	USP37 (ENSPCTG00005017971) #11	CNOT9 (ENSPCTG00005018215) #12	PLCD4 (ENSPCTG00005018288) #13	ZNF142 (ENSPCTG00005018649) #14	BCS1L (ENSPCTG00005018671) #15	RNF25 (ENSPCTG00005018698) #16	STK36 (ENSPCTG00005018735) #18	TTLL4 (ENSPCTG00005018815) #19	ENSPCTG00005018949	WNT6 (ENSPCTG00005018979) #22	WNT10A (ENSPCTG00005019019) #23	CDK5R2 (ENSPCTG00005019049) #24	FEV (ENSPCTG00005019061) #25	CRYBA2 (ENSPCTG00005019097) #26	CFAP65 (ENSPCTG00005019150) #27	IHH (ENSPCTG00005019553) #28	ENSPCTG00005019578	ENSPCTG00005019597	PTPRN (ENSPCTG00005019662) #37	DNAJB2 (ENSPCTG00005019868) #36	ENSPCTG00005020056 #35	TUBA4A (ENSPCTG00005020138) #34	SLC23A3 (ENSPCTG00005020177) #30	CNPPD1 (ENSPCTG00005020329) #31	RETREG2 (ENSPCTG00005020360) #32
Blue whale	MODERN SPECIES	18	CATIP (ENSBMSG00010004499)	SLC11A1 (ENSBMSG00010004527) #7	CTDSP1 (ENSBMSG00010004557) #8	VIL1 (ENSBMSG00010004591) #10	USP37 (ENSBMSG00010004662) #11	CNOT9 (ENSBMSG00010004706) #12	PLCD4 (ENSBMSG00010004724) #13	ENSBMSG00010004764	BCS1L (ENSBMSG00010004770) #15	RNF25 (ENSBMSG00010004780) #16	STK36 (ENSBMSG00010004792) #18	TTLL4 (ENSBMSG00010004810) #19	ENSBMSG00010004828	CYP27A1 (ENSBMSG00010004838) #20	PRKAG3 (ENSBMSG00010000199) #21	WNT6 (ENSBMSG00010000268) #22	WNT10A (ENSBMSG00010000304) #23	CDK5R2 (ENSBMSG00010000336) #24	ENSBMSG00010000352	FEV (ENSBMSG00010000362) #25	CRYBA2 (ENSBMSG00010000382) #26	CFAP65 (ENSBMSG00010000454) #27	IHH (ENSBMSG00010000536) #28	NHEJ1 (ENSBMSG00010000554) #29	SLC23A3 (ENSBMSG00010000582) #30	CNPPD1 (ENSBMSG00010000605) #31	RETREG2 (ENSBMSG00010000620) #32	ZFAND2B (ENSBMSG00010000665)	ABCB6 (ENSBMSG00010000736)	ATG9A (ENSBMSG00010000868)	ENSBMSG00010000923
Pecora	ANCESTRAL SPECIES	16	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Percora_a	ANCESTRAL SPECIES	5	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Bovidae	ANCESTRAL SPECIES	8	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Caprinae	ANCESTRAL SPECIES	5	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020007154	SLC11A1 (ENSOARG00020007179) #7	CTDSP1 (ENSOARG00020007259) #8	ENSOARG00020007316	VIL1 (ENSOARG00020007377) #10	USP37 (ENSOARG00020007519) #11	CNOT9 (ENSOARG00020007920) #12	PLCD4 (ENSOARG00020007976) #13	ENSOARG00020008046 #14	BCS1L (ENSOARG00020008102) #15	RNF25 (ENSOARG00020008163) #16	STK36 (ENSOARG00020008297) #18	TTLL4 (ENSOARG00020008478) #19	CYP27A1 (ENSOARG00020008639) #20	PRKAG3 (ENSOARG00020008702) #21	WNT6 (ENSOARG00020008888) #22	WNT10A (ENSOARG00020008936) #23	CDK5R2 (ENSOARG00020008961) #24	FEV (ENSOARG00020008978) #25	CRYBA2 (ENSOARG00020009010) #26	CFAP65 (ENSOARG00020009094) #27	IHH (ENSOARG00020009787) #28	NHEJ1 (ENSOARG00020009824) #29	CNPPD1 (ENSOARG00020010841) #31	RETREG2 (ENSOARG00020010880) #32	ZFAND2B (ENSOARG00020010938)	ABCB6 (ENSOARG00020011210)	ATG9A (ENSOARG00020011497)	ANKZF1 (ENSOARG00020011753)	GLB1L (ENSOARG00020011884)	STK16 (ENSOARG00020012238) #33
Goat	MODERN SPECIES	11	CATIP (ENSCHIG00000017568)	ENSCHIG00000003580	SLC11A1 (ENSCHIG00000017190) #7	CTDSP1 (ENSCHIG00000022405) #8	VIL1 (ENSCHIG00000016310) #10	USP37 (ENSCHIG00000007660) #11	CNOT9 (ENSCHIG00000026257) #12	PLCD4 (ENSCHIG00000022545) #13	ENSCHIG00000022713 #14	BCS1L (ENSCHIG00000009282) #15	RNF25 (ENSCHIG00000010384) #16	STK36 (ENSCHIG00000020004) #18	TTLL4 (ENSCHIG00000022274) #19	CYP27A1 (ENSCHIG00000025011) #20	PRKAG3 (ENSCHIG00000023341) #21	WNT6 (ENSCHIG00000023410) #22	WNT10A (ENSCHIG00000022853) #23	CDK5R2 (ENSCHIG00000012592) #24	FEV (ENSCHIG00000015312) #25	CRYBA2 (ENSCHIG00000020371) #26	CFAP65 (ENSCHIG00000015285) #27	IHH (ENSCHIG00000016564) #28	NHEJ1 (ENSCHIG00000014914) #29	SLC23A3 (ENSCHIG00000014898) #30	CNPPD1 (ENSCHIG00000011186) #31	RETREG2 (ENSCHIG00000009217) #32	ZFAND2B (ENSCHIG00000008045)	ABCB6 (ENSCHIG00000015177)	ATG9A (ENSCHIG00000023070)	ANKZF1 (ENSCHIG00000022697)	GLB1L (ENSCHIG00000019815)
Bovinae	ANCESTRAL SPECIES	5	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Bos	ANCESTRAL SPECIES	6	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Bos_b	ANCESTRAL SPECIES	20	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Hybrid Bos Indicus	MODERN SPECIES	11	TMBIM1 (ENSBIXG00005007076)	CATIP (ENSBIXG00005023503)	SLC11A1 (ENSBIXG00005023464) #7	CTDSP1 (ENSBIXG00005023395) #8	VIL1 (ENSBIXG00005023329) #10	USP37 (ENSBIXG00005023268) #11	CNOT9 (ENSBIXG00005023182) #12	PLCD4 (ENSBIXG00005023140) #13	ENSBIXG00005023078 #14	BCS1L (ENSBIXG00005023013) #15	RNF25 (ENSBIXG00005022967) #16	STK36 (ENSBIXG00005022916) #18	TTLL4 (ENSBIXG00005022832) #19	CYP27A1 (ENSBIXG00005022772) #20	PRKAG3 (ENSBIXG00005022713) #21	WNT6 (ENSBIXG00005022659) #22	WNT10A (ENSBIXG00005022642) #23	CDK5R2 (ENSBIXG00005003865) #24	FEV (ENSBIXG00005022607) #25	CRYBA2 (ENSBIXG00005022597) #26	CFAP65 (ENSBIXG00005022540) #27	IHH (ENSBIXG00005022267) #28	NHEJ1 (ENSBIXG00005022226) #29	SLC23A3 (ENSBIXG00005003774) #30	CNPPD1 (ENSBIXG00005022037) #31	RETREG2 (ENSBIXG00005003713) #32	ZFAND2B (ENSBIXG00005021975)	ENSBIXG00005021858	ANKZF1 (ENSBIXG00005021687)	GLB1L (ENSBIXG00005021612)	STK16 (ENSBIXG00005000014) #33
Cow	MODERN SPECIES	11	PNKD (ENSBTAG00000003936)	CATIP (ENSBTAG00000003944)	SLC11A1 (ENSBTAG00000015520) #7	CTDSP1 (ENSBTAG00000008362) #8	VIL1 (ENSBTAG00000018543) #10	USP37 (ENSBTAG00000016572) #11	CNOT9 (ENSBTAG00000003807) #12	PLCD4 (ENSBTAG00000003809) #13	ZNF142 (ENSBTAG00000026772) #14	BCS1L (ENSBTAG00000003813) #15	RNF25 (ENSBTAG00000003817) #16	STK36 (ENSBTAG00000003819) #18	TTLL4 (ENSBTAG00000018415) #19	CYP27A1 (ENSBTAG00000013489) #20	PRKAG3 (ENSBTAG00000013492) #21	WNT6 (ENSBTAG00000013990) #22	WNT10A (ENSBTAG00000009217) #23	CDK5R2 (ENSBTAG00000031052) #24	FEV (ENSBTAG00000020191) #25	CRYBA2 (ENSBTAG00000014819) #26	CFAP65 (ENSBTAG00000026751) #27	IHH (ENSBTAG00000008452) #28	NHEJ1 (ENSBTAG00000031041) #29	SLC23A3 (ENSBTAG00000012618) #30	CNPPD1 (ENSBTAG00000012619) #31	RETREG2 (ENSBTAG00000012620) #32	ZFAND2B (ENSBTAG00000020606)	ABCB6 (ENSBTAG00000020607)	ATG9A (ENSBTAG00000020608)	ANKZF1 (ENSBTAG00000020610)	GLB1L (ENSBTAG00000020611)
Bos_a	ANCESTRAL SPECIES	4	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Domestic yak	MODERN SPECIES	11	PNKD (ENSBGRG00000001618)	CATIP (ENSBGRG00000001579)	SLC11A1 (ENSBGRG00000001439) #7	CTDSP1 (ENSBGRG00000001379) #8	VIL1 (ENSBGRG00000001312) #10	USP37 (ENSBGRG00000001165) #11	CNOT9 (ENSBGRG00000001130) #12	PLCD4 (ENSBGRG00000001098) #13	ENSBGRG00000001065 #14	BCS1L (ENSBGRG00000001040) #15	RNF25 (ENSBGRG00000001002) #16	STK36 (ENSBGRG00000000918) #18	TTLL4 (ENSBGRG00000000831) #19	CYP27A1 (ENSBGRG00000000784) #20	PRKAG3 (ENSBGRG00000000724) #21	WNT6 (ENSBGRG00000000692) #22	WNT10A (ENSBGRG00000000672) #23	CDK5R2 (ENSBGRG00000000662) #24	FEV (ENSBGRG00000000650) #25	CRYBA2 (ENSBGRG00000000636) #26	CFAP65 (ENSBGRG00000000510) #27	IHH (ENSBGRG00000000478) #28	ENSBGRG00000000275 #29	CNPPD1 (ENSBGRG00000000191) #31	RETREG2 (ENSBGRG00000000177) #32	ENSBGRG00000000170	ZFAND2B (ENSBGRG00000022252)	ABCB6 (ENSBGRG00000021927)	ATG9A (ENSBGRG00000021811)	ANKZF1 (ENSBGRG00000021721)	STK16 (ENSBGRG00000021450) #33
Wild yak	MODERN SPECIES	262	CATIP (ENSBMUG00000025893)	SLC11A1 (ENSBMUG00000025898) #7	CTDSP1 (ENSBMUG00000025903) #8	VIL1 (ENSBMUG00000025916) #10	USP37 (ENSBMUG00000025936) #11	CNOT9 (ENSBMUG00000025942) #12	PLCD4 (ENSBMUG00000025954) #13	ENSBMUG00000025970 #14	BCS1L (ENSBMUG00000025973) #15	RNF25 (ENSBMUG00000025976) #16	STK36 (ENSBMUG00000025981) #18	TTLL4 (ENSBMUG00000025991) #19	ENSBMUG00000025993	CYP27A1 (ENSBMUG00000026005) #20	PRKAG3 (ENSBMUG00000026007) #21	WNT6 (ENSBMUG00000026009) #22	WNT10A (ENSBMUG00000026013) #23	ENSBMUG00000026015 #24	FEV (ENSBMUG00000026019) #25	CRYBA2 (ENSBMUG00000026021) #26	CFAP65 (ENSBMUG00000026047) #27	IHH (ENSBMUG00000026052) #28	NHEJ1 (ENSBMUG00000026054) #29	SLC23A3 (ENSBMUG00000026064) #30	CNPPD1 (ENSBMUG00000026070) #31	RETREG2 (ENSBMUG00000026075) #32	ZFAND2B (ENSBMUG00000026079)	ABCB6 (ENSBMUG00000026082)	ATG9A (ENSBMUG00000026090)	ANKZF1 (ENSBMUG00000026096)	GLB1L (ENSBMUG00000026101)
American bison	MODERN SPECIES	3330	TMBIM1 (ENSBBBG00000001560)	CATIP (ENSBBBG00000009633)	SLC11A1 (ENSBBBG00000009627) #7	CTDSP1 (ENSBBBG00000009622) #8	VIL1 (ENSBBBG00000009616) #10	USP37 (ENSBBBG00000009603) #11	CNOT9 (ENSBBBG00000009564) #12	PLCD4 (ENSBBBG00000009557) #13	ENSBBBG00000009542 #14	BCS1L (ENSBBBG00000009528) #15	RNF25 (ENSBBBG00000001540) #16	STK36 (ENSBBBG00000001539) #18	TTLL4 (ENSBBBG00000009504) #19	CYP27A1 (ENSBBBG00000009491) #20	PRKAG3 (ENSBBBG00000009488) #21	WNT6 (ENSBBBG00000009484) #22	WNT10A (ENSBBBG00000009483) #23	CDK5R2 (ENSBBBG00000009480) #24	CRYBA2 (ENSBBBG00000009479) #26	CFAP65 (ENSBBBG00000009477) #27	IHH (ENSBBBG00000009468) #28	NHEJ1 (ENSBBBG00000009466) #29	SLC23A3 (ENSBBBG00000009461) #30	CNPPD1 (ENSBBBG00000009454) #31	RETREG2 (ENSBBBG00000006755) #32	ZFAND2B (ENSBBBG00000025422)	ABCB6 (ENSBBBG00000007757)	ATG9A (ENSBBBG00000006629)	ANKZF1 (ENSBBBG00000024944)	GLB1L (ENSBBBG00000024851)	STK16 (ENSBBBG00000006477) #33
Siberian musk deer	MODERN SPECIES	352	TMBIM1 (ENSMMSG00000016995)	CATIP (ENSMMSG00000017022)	SLC11A1 (ENSMMSG00000017070) #7	CTDSP1 (ENSMMSG00000017093) #8	VIL1 (ENSMMSG00000017148) #10	USP37 (ENSMMSG00000017309) #11	CNOT9 (ENSMMSG00000017385) #12	PLCD4 (ENSMMSG00000017421) #13	ENSMMSG00000017469 #14	BCS1L (ENSMMSG00000017492) #15	RNF25 (ENSMMSG00000017525) #16	STK36 (ENSMMSG00000017568) #18	TTLL4 (ENSMMSG00000017658) #19	CYP27A1 (ENSMMSG00000017780) #20	PRKAG3 (ENSMMSG00000017891) #21	WNT6 (ENSMMSG00000017986) #22	WNT10A (ENSMMSG00000018012) #23	CDK5R2 (ENSMMSG00000018049) #24	FEV (ENSMMSG00000018069) #25	CRYBA2 (ENSMMSG00000018103) #26	CFAP65 (ENSMMSG00000018168) #27	IHH (ENSMMSG00000018411) #28	NHEJ1 (ENSMMSG00000018435) #29	SLC23A3 (ENSMMSG00000018467) #30	CNPPD1 (ENSMMSG00000018565) #31	RETREG2 (ENSMMSG00000018601) #32	ZFAND2B (ENSMMSG00000018683)	ABCB6 (ENSMMSG00000018803)	ATG9A (ENSMMSG00000018918)	ANKZF1 (ENSMMSG00000018979)	GLB1L (ENSMMSG00000019120)
Yarkand deer	MODERN SPECIES	31	PNKD (ENSCHYG00000002024)	CATIP (ENSCHYG00000001958)	SLC11A1 (ENSCHYG00000001919) #7	CTDSP1 (ENSCHYG00000001880) #8	VIL1 (ENSCHYG00000001829) #10	USP37 (ENSCHYG00000001693) #11	CNOT9 (ENSCHYG00000001629) #12	PLCD4 (ENSCHYG00000001587) #13	ENSCHYG00000001556 #14	BCS1L (ENSCHYG00000001534) #15	RNF25 (ENSCHYG00000001498) #16	STK36 (ENSCHYG00000001439) #18	TTLL4 (ENSCHYG00000001312) #19	CYP27A1 (ENSCHYG00000001246) #20	PRKAG3 (ENSCHYG00000001210) #21	WNT6 (ENSCHYG00000001192) #22	WNT10A (ENSCHYG00000001166) #23	ENSCHYG00000001150 #24	FEV (ENSCHYG00000001142) #25	CRYBA2 (ENSCHYG00000001123) #26	CFAP65 (ENSCHYG00000000994) #27	IHH (ENSCHYG00000000953) #28	NHEJ1 (ENSCHYG00000000939) #29	SLC23A3 (ENSCHYG00000000872) #30	CNPPD1 (ENSCHYG00000000854) #31	RETREG2 (ENSCHYG00000000827) #32	ZFAND2B (ENSCHYG00000000782)	ABCB6 (ENSCHYG00000000721)	ATG9A (ENSCHYG00000000684)	ANKZF1 (ENSCHYG00000000651)	GLB1L (ENSCHYG00000000594)
Camelidae	ANCESTRAL SPECIES	2	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Arabian camel	MODERN SPECIES	31	TMBIM1 (ENSCDRG00005017738)	CATIP (ENSCDRG00005017776)	SLC11A1 (ENSCDRG00005017805) #7	CTDSP1 (ENSCDRG00005017859) #8	VIL1 (ENSCDRG00005017921) #10	USP37 (ENSCDRG00005017998) #11	CNOT9 (ENSCDRG00005018120) #12	PLCD4 (ENSCDRG00005018172) #13	ENSCDRG00005018284 #14	BCS1L (ENSCDRG00005018346) #15	RNF25 (ENSCDRG00005018384) #16	STK36 (ENSCDRG00005018460) #18	TTLL4 (ENSCDRG00005018698) #19	CYP27A1 (ENSCDRG00005000044) #20	PRKAG3 (ENSCDRG00005000055) #21	WNT6 (ENSCDRG00005000063) #22	WNT10A (ENSCDRG00005000075) #23	ENSCDRG00005000083 #24	FEV (ENSCDRG00005000093) #25	CRYBA2 (ENSCDRG00005000127) #26	CFAP65 (ENSCDRG00005000170) #27	IHH (ENSCDRG00005000319) #28	NHEJ1 (ENSCDRG00005000334) #29	SLC23A3 (ENSCDRG00005000361) #30	CNPPD1 (ENSCDRG00005000383) #31	RETREG2 (ENSCDRG00005000396) #32	ZFAND2B (ENSCDRG00005000431)	ABCB6 (ENSCDRG00005000480)	ATG9A (ENSCDRG00005000564)	ANKZF1 (ENSCDRG00005000595)	GLB1L (ENSCDRG00005000640)
Alpaca	MODERN SPECIES	1521			ARPC2 (ENSVPAG00000012258)	AAMP (ENSVPAG00000012260)	PNKD (ENSVPAG00000012262)	ENSVPAG00000012264	SLC11A1 (ENSVPAG00000012265) #7	ENSVPAG00000012266 #10	USP37 (ENSVPAG00000012267) #11	CNOT9 (ENSVPAG00000012270) #12	PLCD4 (ENSVPAG00000012273) #13	RNF25 (ENSVPAG00000012275) #16	STK36 (ENSVPAG00000012276) #18	TTLL4 (ENSVPAG00000012277) #19	CYP27A1 (ENSVPAG00000012278) #20	WNT6 (ENSVPAG00000012279) #22
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Carnivora	ANCESTRAL SPECIES	17	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Caniformia	ANCESTRAL SPECIES	14	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Dog	MODERN SPECIES	30	TMBIM1 (ENSCAFG00845026892)	CATIP (ENSCAFG00845027011)	SLC11A1 (ENSCAFG00845027087) #7	CTDSP1 (ENSCAFG00845027186) #8	VIL1 (ENSCAFG00845027330) #10	USP37 (ENSCAFG00845027522) #11	CNOT9 (ENSCAFG00845027753) #12	PLCD4 (ENSCAFG00845027787) #13	ENSCAFG00845027833 #14	BCS1L (ENSCAFG00845027882) #15	RNF25 (ENSCAFG00845027929) #16	STK36 (ENSCAFG00845028016) #18	TTLL4 (ENSCAFG00845028151) #19	CYP27A1 (ENSCAFG00845028313) #20	PRKAG3 (ENSCAFG00845028465) #21	WNT6 (ENSCAFG00845028514) #22	WNT10A (ENSCAFG00845028544) #23	FEV (ENSCAFG00845028578) #25	CRYBA2 (ENSCAFG00845028604) #26	CFAP65 (ENSCAFG00845028693) #27	IHH (ENSCAFG00845028975) #28	NHEJ1 (ENSCAFG00845028988) #29	CNPPD1 (ENSCAFG00845029089) #31	RETREG2 (ENSCAFG00845029300) #32	ZFAND2B (ENSCAFG00845029346)	ABCB6 (ENSCAFG00845029425)	ATG9A (ENSCAFG00845029525)	ANKZF1 (ENSCAFG00845029641)	GLB1L (ENSCAFG00845029694)	STK16 (ENSCAFG00845029788) #33	TUBA4A (ENSCAFG00845029842) #34
Dingo	MODERN SPECIES	398	CATIP (ENSCAFG00020027091)	SLC11A1 (ENSCAFG00020027086) #7	CTDSP1 (ENSCAFG00020027080) #8	VIL1 (ENSCAFG00020027076) #10	USP37 (ENSCAFG00020027067) #11	CNOT9 (ENSCAFG00020027062) #12	PLCD4 (ENSCAFG00020027058) #13	ENSCAFG00020027052 #14	BCS1L (ENSCAFG00020027051) #15	RNF25 (ENSCAFG00020027049) #16	ENSCAFG00020027048 #18	ENSCAFG00020027047 #18	TTLL4 (ENSCAFG00020027046) #19	CYP27A1 (ENSCAFG00020027045) #20	PRKAG3 (ENSCAFG00020027043) #21	WNT6 (ENSCAFG00020027041) #22	WNT10A (ENSCAFG00020027039) #23	CDK5R2 (ENSCAFG00020027038) #24	FEV (ENSCAFG00020027037) #25	CRYBA2 (ENSCAFG00020027036) #26	CFAP65 (ENSCAFG00020027029) #27	IHH (ENSCAFG00020027025) #28	NHEJ1 (ENSCAFG00020027023) #29	SLC23A3 (ENSCAFG00020027019) #30	CNPPD1 (ENSCAFG00020027017) #31	RETREG2 (ENSCAFG00020027014) #32	ZFAND2B (ENSCAFG00020027013)	ABCB6 (ENSCAFG00020027012)	ATG9A (ENSCAFG00020027011)	ANKZF1 (ENSCAFG00020027006)	GLB1L (ENSCAFG00020027003)
Red fox	MODERN SPECIES	39	CATIP (ENSVVUG00000007337)	SLC11A1 (ENSVVUG00000005767) #7	CTDSP1 (ENSVVUG00000005695) #8	VIL1 (ENSVVUG00000004095) #10	TMA7 (ENSVVUG00000003985)	USP37 (ENSVVUG00000003502) #11	CNOT9 (ENSVVUG00000003469) #12	PLCD4 (ENSVVUG00000003179) #13	ENSVVUG00000003097 #14	BCS1L (ENSVVUG00000003071) #15	RNF25 (ENSVVUG00000002796) #16	STK36 (ENSVVUG00000002330) #18	TTLL4 (ENSVVUG00000001146) #19	CYP27A1 (ENSVVUG00000001035) #20	PRKAG3 (ENSVVUG00000000989) #21	WNT6 (ENSVVUG00000000977) #22	WNT10A (ENSVVUG00000000971) #23	CDK5R2 (ENSVVUG00000000932) #24	CRYBA2 (ENSVVUG00000000927) #26	CFAP65 (ENSVVUG00000000403) #27	IHH (ENSVVUG00000000214) #28	ENSVVUG00000000136	NHEJ1 (ENSVVUG00000025797) #29	SLC23A3 (ENSVVUG00000025794) #30	CNPPD1 (ENSVVUG00000025793) #31	RETREG2 (ENSVVUG00000025791) #32	ZFAND2B (ENSVVUG00000025788)	ABCB6 (ENSVVUG00000025784)	ATG9A (ENSVVUG00000025782)	ANKZF1 (ENSVVUG00000025776)	GLB1L (ENSVVUG00000025774)
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Mustelinae	ANCESTRAL SPECIES	35	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
American mink	MODERN SPECIES	15	ENSNVIG00000022310	CATIP (ENSNVIG00000022315)	SLC11A1 (ENSNVIG00000022328) #7	CTDS1 (ENSNVIG00000022342) #8	VIL1 (ENSNVIG00000022355) #10	USP37 (ENSNVIG00000022378) #11	CNOT9 (ENSNVIG00000022486) #12	PLCD4 (ENSNVIG00000022510) #13	ENSNVIG00000022533 #14	BCS1 (ENSNVIG00000022539) #15	RNF25 (ENSNVIG00000022548) #16	STK36 (ENSNVIG00000022555) #18	TTLL4 (ENSNVIG00000022578) #19	CYP27A1 (ENSNVIG00000022659) #20	PRKAG3 (ENSNVIG00000022666) #21	WNT6 (ENSNVIG00000022672) #22	WNT10A (ENSNVIG00000022675) #23	CDK5R2 (ENSNVIG00000022677) #24	FEV (ENSNVIG00000022682) #25	CRYBA2 (ENSNVIG00000022687) #26	CFAP65 (ENSNVIG00000022699) #27	IHH (ENSNVIG00000022725) #28	NHEJ1 (ENSNVIG00000022726) #29	CNPD1 (ENSNVIG00000022734) #30	RETREG2 (ENSNVIG00000022763) #32	ZFAND2B (ENSNVIG00000022772)	ABCB6 (ENSNVIG00000022778)	ATG9A (ENSNVIG00000022789)	ANKZF1 (ENSNVIG00000022799)	GLB1L (ENSNVIG00000022812)	STK16 (ENSNVIG00000022823) #33
Ferret	MODERN SPECIES	253	PNKD (ENSMPUG00000016531)	CATIP (ENSMPUG00000016532)	SLC11A1 (ENSMPUG00000016533) #7	CTDSP1 (ENSMPUG00000016534) #8	VIL1 (ENSMPUG00000016535) #10	USP37 (ENSMPUG00000016536) #11	CNOT9 (ENSMPUG00000016537) #12	PLCD4 (ENSMPUG00000016538) #13	ENSMPUG00000016539 #14	BCS1L (ENSMPUG00000016540) #15	RNF25 (ENSMPUG00000016541) #16	STK36 (ENSMPUG00000016546) #18	TTLL4 (ENSMPUG00000016547) #19	CYP27A1 (ENSMPUG00000016548) #20	PRKAG3 (ENSMPUG00000016549) #21	WNT6 (ENSMPUG00000016550) #22	WNT10A (ENSMPUG00000016551) #23	FEV (ENSMPUG00000016552) #25	CRYBA2 (ENSMPUG00000016553) #26	CFAP65 (ENSMPUG00000016555) #27	IHH (ENSMPUG00000016557) #28	NHEJ1 (ENSMPUG00000016563) #29	CNPPD1 (ENSMPUG00000016565) #31	RETREG2 (ENSMPUG00000016566) #32	ZFAND2B (ENSMPUG00000016570)	ABCB6 (ENSMPUG00000016572)	ATG9A (ENSMPUG00000016573)	ANKZF1 (ENSMPUG00000016580)	GLB1L (ENSMPUG00000016582)	STK16 (ENSMPUG00000016603) #33	TUBA4A (ENSMPUG00000016605) #34
Ursidae	ANCESTRAL SPECIES	7	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299.j #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306.b #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Ursus	ANCESTRAL SPECIES																	ENSGT00940000159281 #22
American black bear	MODERN SPECIES	8555																WNT6 (ENSUAMG00000001442) #22
Giant Panda	MODERN SPECIES	11	PNKD (ENSAMEG00000003089)	TMBIM1 (ENSAMEG00000003102)	CATIP (ENSAMEG00000003080)	SLC11A1 (ENSAMEG00000003017) #7	VIL1 (ENSAMEG00000002998) #10	USP37 (ENSAMEG00000002927) #11	CNOT9 (ENSAMEG00000002901) #12	PLCD4 (ENSAMEG00000002833) #13	ENSAMEG00000002817 #14	BCS1L (ENSAMEG00000002795) #15	RNF25 (ENSAMEG00000002779) #16	STK36 (ENSAMEG00000002752) #18	TTLL4 (ENSAMEG00000025278) #19	CYP27A1 (ENSAMEG00000002714) #20	PRKAG3 (ENSAMEG00000002676) #21	WNT6 (ENSAMEG00000002665) #22	WNT10A (ENSAMEG00000002646) #23	FEV (ENSAMEG00000002639) #25	CRYBA2 (ENSAMEG00000002615) #26	CFAP65 (ENSAMEG00000002575) #27	IHH (ENSAMEG00000027416) #28	NHEJ1 (ENSAMEG00000002562) #29	SLC23A3 (ENSAMEG00000002538) #30	ENSAMEG00000002494	ABCB6 (ENSAMEG00000002427)	ZFAND2B (ENSAMEG00000002464)	ATG9A (ENSAMEG00000002386)	ANKZF1 (ENSAMEG00000002362)	GLB1L (ENSAMEG00000002329)	STK16 (ENSAMEG00000002308) #33	TUBA4A (ENSAMEG00000028540) #34
Felidae	ANCESTRAL SPECIES	15	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Panthera	ANCESTRAL SPECIES	9	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Panthera_a	ANCESTRAL SPECIES	6	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
leopard	MODERN SPECIES	12	SLC11A1 (ENSPPRG00000023565) #7	CTDSP1 (ENSPPRG00000023051) #8	ENSPPRG00000000614 ##8	VIL1 (ENSPPRG00000000854) #10	USP37 (ENSPPRG00000002413) #11	CNOT9 (ENSPPRG00000002827) #12	PLCD4 (ENSPPRG00000003858) #13	ENSPPRG00000004287 #14	BCS1L (ENSPPRG00000005159) #15	RNF25 (ENSPPRG00000005371) #16	STK36 (ENSPPRG00000006965) #18	TTLL4 (ENSPPRG00000008390) #19	ENSPPRG00000008414	CYP27A1 (ENSPPRG00000008560) #20	PRKAG3 (ENSPPRG00000008754) #21	WNT6 (ENSPPRG00000008814) #22	WNT10A (ENSPPRG00000008877) #23	CDK5R2 (ENSPPRG00000022058) #24	FEV (ENSPPRG00000009437) #25	CRYBA2 (ENSPPRG00000009580) #26	CFAP65 (ENSPPRG00000012363) #27	IHH (ENSPPRG00000012622) #28	NHEJ1 (ENSPPRG00000012808) #29	SLC23A3 (ENSPPRG00000013147) #30	CNPPD1 (ENSPPRG00000013483) #31	RETREG2 (ENSPPRG00000013844) #32	ZFAND2B (ENSPPRG00000015562)	ABCB6 (ENSPPRG00000016666)	ATG9A (ENSPPRG00000018424)	ANKZF1 (ENSPPRG00000018883)	GLB1L (ENSPPRG00000020047)
lion	MODERN SPECIES	8	PNKD (ENSPLOG00000020806)	CATIP (ENSPLOG00000020683)	SLC11A1 (ENSPLOG00000020625) #7	CTDSP1 (ENSPLOG00000020517) #8	VIL1 (ENSPLOG00000020362) #10	USP37 (ENSPLOG00000020198) #11	CNOT9 (ENSPLOG00000020058) #12	PLCD4 (ENSPLOG00000019831) #13	ZNF142 (ENSPLOG00000019762)	BCS1L (ENSPLOG00000019725) #15	RNF25 (ENSPLOG00000019651) #16	STK36 (ENSPLOG00000019317) #18	TTLL4 (ENSPLOG00000018947) #19	CYP27A1 (ENSPLOG00000018821) #20	PRKAG3 (ENSPLOG00000018692) #21	WNT6 (ENSPLOG00000018620) #22	WNT10A (ENSPLOG00000018566) #23	CDK5R2 (ENSPLOG00000018482) #24	FEV (ENSPLOG00000018437) #25	CRYBA2 (ENSPLOG00000018385) #26	ENSPLOG00000018325 #27	IHH (ENSPLOG00000018217) #28	NHEJ1 (ENSPLOG00000018152) #29	ENSPLOG00000017778 #31	RETREG2 (ENSPLOG00000017697) #32	ZFAND2B (ENSPLOG00000017307)	ABCB6 (ENSPLOG00000016975)	ATG9A (ENSPLOG00000016864)	ANKZF1 (ENSPLOG00000016796)	GLB1L (ENSPLOG00000016479)	STK16 (ENSPLOG00000016322) #33
Cat	MODERN SPECIES	239	TMBIM1 (ENSFCAG00000002374)	CATIP (ENSFCAG00000002376)	SLC11A1 (ENSFCAG00000002377) #7	CTDSP1 (ENSFCAG00000002378) #8	VIL1 (ENSFCAG00000002379) #10	USP37 (ENSFCAG00000002380) #11	CNOT9 (ENSFCAG00000034905) #12	PLCD4 (ENSFCAG00000004152) #13	ENSFCAG00000024599 #14	BCS1L (ENSFCAG00000004154) #15	RNF25 (ENSFCAG00000004155) #16	STK36 (ENSFCAG00000004156) #18	TTLL4 (ENSFCAG00000038954) #19	CYP27A1 (ENSFCAG00000007063) #20	PRKAG3 (ENSFCAG00000007064) #21	WNT6 (ENSFCAG00000043651) #22	WNT10A (ENSFCAG00000044254) #23	CDK5R2 (ENSFCAG00000043220) #24	FEV (ENSFCAG00000045613) #25	CRYBA2 (ENSFCAG00000007487) #26	CFAP65 (ENSFCAG00000007488) #27	IHH (ENSFCAG00000029276) #28	NHEJ1 (ENSFCAG00000035699) #29	SLC23A3 (ENSFCAG00000007491) #30	RETREG2 (ENSFCAG00000011233) #32	ZFAND2B (ENSFCAG00000011237)	ABCB6 (ENSFCAG00000011240)	ATG9A (ENSFCAG00000011243)	ANKZF1 (ENSFCAG00000011246)	GLB1L (ENSFCAG00000011248)	STK16 (ENSFCAG00000030820) #33
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Chiroptera	ANCESTRAL SPECIES	11	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00990000213248	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Greater horseshoe bat	MODERN SPECIES	26	PNKD (ENSRFEG00010011406)	CATIP (ENSRFEG00010011346)	SLC11A1 (ENSRFEG00010011285) #7	CTDSP1 (ENSRFEG00010011217) #8	VIL1 (ENSRFEG00010011035) #10	USP37 (ENSRFEG00010010894) #11	CNOT9 (ENSRFEG00010010828) #12	PLCD4 (ENSRFEG00010010727) #13	ENSRFEG00010010661 #14	BCS1L (ENSRFEG00010010532) #15	RNF25 (ENSRFEG00010010472) #16	STK36 (ENSRFEG00010009998) #18	TTLL4 (ENSRFEG00010009497) #19	CYP27A1 (ENSRFEG00010009435) #20	PRKAG3 (ENSRFEG00010009316) #21	WNT6 (ENSRFEG00010009291) #22	WNT10A (ENSRFEG00010009243) #23	CDK5R2 (ENSRFEG00010009228) #24	FEV (ENSRFEG00010009194) #25	CRYBA2 (ENSRFEG00010009131) #26	CFAP65 (ENSRFEG00010008702) #27	IHH (ENSRFEG00010008660) #28	SLC23A3 (ENSRFEG00010008570) #30	CNPPD1 (ENSRFEG00010008485) #31	RETREG2 (ENSRFEG00010008345) #32	ZFAND2B (ENSRFEG00010008179)	ABCB6 (ENSRFEG00010007824)	ATG9A (ENSRFEG00010007760)	ANKZF1 (ENSRFEG00010007709)	GLB1L (ENSRFEG00010007619)	STK16 (ENSRFEG00010007354) #33
Microbat	MODERN SPECIES	940	ENSMLUG00000004161	GPBAR1 (ENSMLUG00000004103)	AAMP (ENSMLUG00000004115)	ENSMLUG00000027073	TMBIM1 (ENSMLUG00000004137)	PNKD (ENSMLUG00000004125)	CNOT9 (ENSMLUG00000001502) #12	PLCD4 (ENSMLUG00000001505) #13	RNF25 (ENSMLUG00000001521) #16	ENSMLUG00000001511 #14	BCS1L (ENSMLUG00000001520) #15	STK36 (ENSMLUG00000001524) #18	TTLL4 (ENSMLUG00000007509) #19	CYP27A1 (ENSMLUG00000004097) #20	PRKAG3 (ENSMLUG00000004110) #21	WNT6 (ENSMLUG00000011087) #22	WNT10A (ENSMLUG00000011090) #23	CDK5R2 (ENSMLUG00000011393) #24	FEV (ENSMLUG00000011400) #25	CRYBA2 (ENSMLUG00000011404) #26	CFAP65 (ENSMLUG00000011424) #27	IHH (ENSMLUG00000011503) #28	ENSMLUG00000026660	NHEJ1 (ENSMLUG00000024087) #29	SLC23A3 (ENSMLUG00000011517) #30	CNPPD1 (ENSMLUG00000023687) #31	RETREG2 (ENSMLUG00000022407) #32	ZFAND2B (ENSMLUG00000007983)	ABCB6 (ENSMLUG00000029153)	ENSMLUG00000008013	ANKZF1 (ENSMLUG00000008036)
Megabat	MODERN SPECIES	1809	ENSPVAG00000017142	CATIP (ENSPVAG00000017143)	SLC11A1 (ENSPVAG00000017144) #7	CTDSP1 (ENSPVAG00000017147) #8	VIL1 (ENSPVAG00000017149) #10	USP37 (ENSPVAG00000017151) #11	CNOT9 (ENSPVAG00000017152) #12	PLCD4 (ENSPVAG00000017153) #13	ENSPVAG00000017154 #14	BCS1L (ENSPVAG00000017155) #15	RNF25 (ENSPVAG00000017156) #16	STK36 (ENSPVAG00000017158) #18	TTLL4 (ENSPVAG00000017160) #19	CYP27A1 (ENSPVAG00000017165) #20	PRKAG3 (ENSPVAG00000017167) #21	WNT6 (ENSPVAG00000017168) #22	WNT10A (ENSPVAG00000017170) #23	CDK5R2 (ENSPVAG00000017171) #24
Equus	ANCESTRAL SPECIES	51	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Horse	MODERN SPECIES	27	TMBIM1 (ENSECAG00000011922)	CATIP (ENSECAG00000015642)	SLC11A1 (ENSECAG00000015807) #7	CTDSP1 (ENSECAG00000008950) #8	VIL1 (ENSECAG00000010006) #10	USP37 (ENSECAG00000018200) #11	CNOT9 (ENSECAG00000059139) #12	PLCD4 (ENSECAG00000012582) #13	ZNF142 (ENSECAG00000017751) #14	BCS1L (ENSECAG00000000224) #15	RNF25 (ENSECAG00000009063) #16	STK36 (ENSECAG00000010391) #18	TTLL4 (ENSECAG00000049252) #19	CYP27A1 (ENSECAG00000019737) #20	PRKAG3 (ENSECAG00000002430) #21	WNT6 (ENSECAG00000013092) #22	WNT10A (ENSECAG00000037351) #23	CDK5R2 (ENSECAG00000006781) #24	FEV (ENSECAG00000016026) #25	CRYBA2 (ENSECAG00000015100) #26	CFAP65 (ENSECAG00000019457) #27	IHH (ENSECAG00000003802) #28	NHEJ1 (ENSECAG00000030989) #29	CNPPD1 (ENSECAG00000010050) #31	RETREG2 (ENSECAG00000013944) #32	ZFAND2B (ENSECAG00000014958)	ABCB6 (ENSECAG00000016378)	ATG9A (ENSECAG00000007801)	ANKZF1 (ENSECAG00000016473)	GLB1L (ENSECAG00000003253)	STK16 (ENSECAG00000014093) #33
Donkey	MODERN SPECIES	10	PNKD (ENSEASG00005012391)	CATIP (ENSEASG00005012386)	SLC11A1 (ENSEASG00005012373) #7	CTDSP1 (ENSEASG00005012367) #8	VIL1 (ENSEASG00005012350) #10	USP37 (ENSEASG00005012329) #11	CNOT9 (ENSEASG00005012317) #12	ENSEASG00005012281 #14	BCS1L (ENSEASG00005012277) #15	RNF25 (ENSEASG00005012269) #16	STK36 (ENSEASG00005012230) #18	ENSEASG00005029569	TTLL4 (ENSEASG00005012028) #19	CYP27A1 (ENSEASG00005011961) #20	PRKAG3 (ENSEASG00005011895) #21	WNT6 (ENSEASG00005011874) #22	WNT10A (ENSEASG00005011873) #23	CDK5R2 (ENSEASG00005033666) #24	FEV (ENSEASG00005013506) #25	CRYBA2 (ENSEASG00005011870) #26	CFAP65 (ENSEASG00005011849) #27	IHH (ENSEASG00005024990) #28	NHEJ1 (ENSEASG00005011836) #29	ENSEASG00005011833 #30	CNPPD1 (ENSEASG00005011830) #31	RETREG2 (ENSEASG00005011827) #32	ZFAND2B (ENSEASG00005011813)	ABCB6 (ENSEASG00005011803)	ATG9A (ENSEASG00005011798)	ANKZF1 (ENSEASG00005011794)	GLB1L (ENSEASG00005011651)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159281 #22
Hedgehog	MODERN SPECIES	1740																ENSEEUG00000001484 #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Afrotheria	ANCESTRAL SPECIES	1	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163279 #14	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Elephant	MODERN SPECIES	301	PNKD (ENSLAFG00000007427)	CATIP (ENSLAFG00000003173)	SLC11A1 (ENSLAFG00000001570) #7	CTDSP1 (ENSLAFG00000023374) #8	VIL1 (ENSLAFG00000026446) #10	USP37 (ENSLAFG00000015247) #11	CNOT9 (ENSLAFG00000012288) #12	PLCD4 (ENSLAFG00000012296) #13	ENSLAFG00000012305 #14	BCS1L (ENSLAFG00000012315) #15	RNF25 (ENSLAFG00000012317) #16	STK36 (ENSLAFG00000012325) #18	TTLL4 (ENSLAFG00000017623) #19	CYP27A1 (ENSLAFG00000017636) #20	PRKAG3 (ENSLAFG00000015976) #21	WNT6 (ENSLAFG00000017647) #22	WNT10A (ENSLAFG00000012543) #23	CDK5R2 (ENSLAFG00000028414) #24	FEV (ENSLAFG00000030729) #25	CRYBA2 (ENSLAFG00000008088) #26	CFAP65 (ENSLAFG00000017651) #27	IHH (ENSLAFG00000010467) #28	SLC23A3 (ENSLAFG00000008216) #30	CNPPD1 (ENSLAFG00000008222) #31	RETREG2 (ENSLAFG00000008223) #32	ZFAND2B (ENSLAFG00000009026)	ABCB6 (ENSLAFG00000009030)	ATG9A (ENSLAFG00000009034)	ANKZF1 (ENSLAFG00000009039)	GLB1L (ENSLAFG00000009043)	STK16 (ENSLAFG00000009050) #33
Hyrax	MODERN SPECIES	10482																WNT6 (ENSPCAG00000014372) #22	WNT10A (ENSPCAG00000014395) #23
Marsupialia	ANCESTRAL SPECIES	8	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00950000183019.f.b.b #21	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000162511 #32	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Common wonbat	MODERN SPECIES	1038	ENSVURG00010002398	SLC11A1 (ENSVURG00010002368) #7	CTDSP1 (ENSVURG00010002333) #8	VIL1 (ENSVURG00010002297) #10	ENSVURG00010002271 #11	ENSVURG00010002258	PLCD4 (ENSVURG00010002213) #13	ENSVURG00010002205	ENSVURG00010002199	BCS1L (ENSVURG00010002183) #15	RNF25 (ENSVURG00010002169) #16	STK36 (ENSVURG00010002099) #18	TTLL4 (ENSVURG00010002059) #19	CYP27A1 (ENSVURG00010002012) #20	PRKAG3 (ENSVURG00010001986) #21	WNT6 (ENSVURG00010001977) #22	WNT10A (ENSVURG00010001964) #23	CDK5R2 (ENSVURG00010001957) #24	FEV (ENSVURG00010001943) #25	CRYBA2 (ENSVURG00010001924) #26	CFAP65 (ENSVURG00010001685) #27	IHH (ENSVURG00010001611) #28	NHEJ1 (ENSVURG00010001601) #29	ENSVURG00010001586 #30	CNPPD1 (ENSVURG00010001578) #31	ENSVURG00010001544	ZFAND2B (ENSVURG00010001521)	ABCB6 (ENSVURG00010000405)	ATG9A (ENSVURG00010000291)	ANKZF1 (ENSVURG00010000261)	GLB1L (ENSVURG00010000208)
koala	MODERN SPECIES	98	PNKD (ENSPCIG00000021457)	CATIP (ENSPCIG00000021460)	SLC11A1 (ENSPCIG00000020020) #7	CTDSP1 (ENSPCIG00000020018) #8	VIL1 (ENSPCIG00000016393) #10	USP37 (ENSPCIG00000016291) #11	CNOT9 (ENSPCIG00000016288) #12	PLCD4 (ENSPCIG00000016135) #13	ZNF142 (ENSPCIG00000016134)	BCS1L (ENSPCIG00000016133) #15	RNF25 (ENSPCIG00000016131) #16	STK36 (ENSPCIG00000016130) #18	TTLL4 (ENSPCIG00000016128) #19	CYP27A1 (ENSPCIG00000016125) #20	PRKAG3 (ENSPCIG00000011214) #21	WNT6 (ENSPCIG00000011120) #22	WNT10A (ENSPCIG00000011118) #23	CDK5R2 (ENSPCIG00000011115) #24	FEV (ENSPCIG00000011110) #25	CRYBA2 (ENSPCIG00000011108) #26	ENSPCIG00000011100 #27	IHH (ENSPCIG00000011095) #28	NHEJ1 (ENSPCIG00000010341) #29	SLC23A3 (ENSPCIG00000010339) #30	CNPPD1 (ENSPCIG00000010338) #31	RETREG2 (ENSPCIG00000036139) #32	ZFAND2B (ENSPCIG00000010335)	ABCB6 (ENSPCIG00000010333)	ATG9A (ENSPCIG00000010329)	ANKZF1 (ENSPCIG00000010326)	GLB1L (ENSPCIG00000010323)
Wallaby	MODERN SPECIES	2448																WNT6 (ENSMEUG00000014130) #22	WNT10A (ENSMEUG00000014137) #23
Tasmanian devil	MODERN SPECIES	2	TMBIM1 (ENSSHAG00000029053)	PNKD (ENSSHAG00000023370)	CATIP (ENSSHAG00000014194)	SLC11A1 (ENSSHAG00000016221) #7	CTDSP1 (ENSSHAG00000031744) #8	VIL1 (ENSSHAG00000016062) #10	USP37 (ENSSHAG00000015902) #11	CNOT9 (ENSSHAG00000015824) #12	PLCD4 (ENSSHAG00000015736) #13	BCS1L (ENSSHAG00000015660) #15	ZNF142 (ENSSHAG00000015673)	STK36 (ENSSHAG00000015575) #18	TTLL4 (ENSSHAG00000015496) #19	PRKAG3 (ENSSHAG00000015219) #21	ENSSHAG00000029676 #20	WNT6 (ENSSHAG00000030441) #22	WNT10A (ENSSHAG00000028653) #23	CDK5R2 (ENSSHAG00000021399) #24	FEV (ENSSHAG00000029082) #25	CRYBA2 (ENSSHAG00000014707) #26	CFAP65 (ENSSHAG00000014437) #27	IHH (ENSSHAG00000014306) #28	SLC23A3 (ENSSHAG00000013697) #30	CNPPD1 (ENSSHAG00000025834) #31	ENSSHAG00000028935 #32	ZFAND2B (ENSSHAG00000013549)	ANKZF1 (ENSSHAG00000013460)	ENSSHAG00000013486	STK16 (ENSSHAG00000013407) #33	ENSSHAG00000025481	ENSSHAG00000013304
Opossum	MODERN SPECIES	6	PNKD (ENSMODG00000015497)	ENSMODG00000015494	SLC11A1 (ENSMODG00000015482) #7	CTDSP1 (ENSMODG00000015431) #8	VIL1 (ENSMODG00000015428) #10	USP37 (ENSMODG00000015421) #11	CNOT9 (ENSMODG00000015414) #12	PLCD4 (ENSMODG00000015407) #13	ENSMODG00000015404 #14	BCS1L (ENSMODG00000015401) #15	RNF25 (ENSMODG00000015397) #16	STK36 (ENSMODG00000015388) #18	TTLL4 (ENSMODG00000015375) #19	CYP27A1 (ENSMODG00000015372) #20	PRKAG3 (ENSMODG00000015369) #21	WNT6 (ENSMODG00000015364) #22	WNT10A (ENSMODG00000015361) #23	CDK5R2 (ENSMODG00000015359) #24	FEV (ENSMODG00000015354) #25	ENSMODG00000043122 #26	ENSMODG00000015348 #27	ENSMODG00000027686	IHH (ENSMODG00000015339) #28	NHEJ1 (ENSMODG00000015338) #29	SLC23A3 (ENSMODG00000015334) #30	CNPPD1 (ENSMODG00000015328) #31	ENSMODG00000015322	ZFAND2B (ENSMODG00000015318)	ABCB6 (ENSMODG00000015313)	ATG9A (ENSMODG00000015302)	ANKZF1 (ENSMODG00000015285)
Platypus	MODERN SPECIES		PNKD (ENSOANG00000048930)	ENSOANG00000041238	SLC11A1 (ENSOANG00000007050) #7	CTDSP1 (ENSOANG00000038979) #8	VIL1 (ENSOANG00000043969) #10	USP37 (ENSOANG00000040621) #11	CNOT9 (ENSOANG00000042732) #12	PLCD4 (ENSOANG00000039189) #13	ZNF142 (ENSOANG00000040583)	BCS1L (ENSOANG00000039658) #15	ENSOANG00000043201 #16	ENSOANG00000037967 #18	TTLL4 (ENSOANG00000050326) #19	PRKAG3 (ENSOANG00000043719) #21	CYP27A1 (ENSOANG00000009475) #20	WNT6 (ENSOANG00000048371) #22	WNT10A (ENSOANG00000036463) #23	CDK5R2 (ENSOANG00000049742) #24	FEV (ENSOANG00000045544) #25	CRYBA2 (ENSOANG00000041884) #26	ENSOANG00000045363 #27	IHH (ENSOANG00000049852) #28	ENSOANG00000048378 #29	ENSOANG00000037778 #30	ENSOANG00000049893 #31	GLB1L (ENSOANG00000041073)	ENSOANG00000038987 #33	TUBA4A (ENSOANG00000007702) #34	ENSOANG00000038452 #36	ENSOANG00000037507 #37	DNPEP (ENSOANG00000043343)
Sauria	ANCESTRAL SPECIES		ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00950000185166	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Emydidae	ANCESTRAL SPECIES	4	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00550000075037 #33	ENSGT00950000183165.a #34	ENSGT00950000183165.b.a ##34	ENSGT01090000263048	ENSGT01030000235385.b.a	ENSGT00940000160220 #36
painted turtle	MODERN SPECIES	697	PNKD (ENSCPBG00000013269)	CATIP (ENSCPBG00000013266)	SLC11A1 (ENSCPBG00000013259) #7	CTDSP1 (ENSCPBG00000013256) #8	VIL1 (ENSCPBG00000013251) #10	USP37 (ENSCPBG00000013249) #11	CNOT9 (ENSCPBG00000013247) #12	PLCD4 (ENSCPBG00000013241) #13	ZNF142 (ENSCPBG00000013238)	BCS1L (ENSCPBG00000013235) #15	RNF25 (ENSCPBG00000013230) #16	STK36 (ENSCPBG00000013226) #18	TTLL4 (ENSCPBG00000013217) #19	PRKAG3 (ENSCPBG00000013193) #21	CYP27A1 (ENSCPBG00000013184) #20	WNT6 (ENSCPBG00000013182) #22	ENSCPBG00000013181 #23	CFAP65 (ENSCPBG00000013177) #27	ENSCPBG00000013176	ENSCPBG00000013175	SLC23A3 (ENSCPBG00000013171) #30	ENSCPBG00000013167	ENSCPBG00000013166	ENSCPBG00000013165	NHEJ1 (ENSCPBG00000013162) #29	ABCB6 (ENSCPBG00000013161)	ATG9A (ENSCPBG00000013160)	ANKZF1 (ENSCPBG00000013159)	ENSCPBG00000013158	GLB1L (ENSCPBG00000013156)	STK16 (ENSCPBG00000013133) #33
Three-toed box turtle	MODERN SPECIES	25	PNKD (ENSTMTG00000002598)	CATIP (ENSTMTG00000002574)	SLC11A1 (ENSTMTG00000002565) #7	VIL1 (ENSTMTG00000002541) #10	ENSTMTG00000002533	USP37 (ENSTMTG00000002474) #11	CNOT9 (ENSTMTG00000002465) #12	PLCD4 (ENSTMTG00000002429) #13	ZNF142 (ENSTMTG00000002420)	BCS1L (ENSTMTG00000002414) #15	RNF25 (ENSTMTG00000002407) #16	STK36 (ENSTMTG00000002393) #18	TTLL4 (ENSTMTG00000002381) #19	ENSTMTG00000002369 #21	CYP27A1 (ENSTMTG00000002362) #20	WNT6 (ENSTMTG00000002357) #22	ENSTMTG00000002349 #23	CDK5R2 (ENSTMTG00000002343) #24	FEV (ENSTMTG00000002340) #25	CFAP65 (ENSTMTG00000002327) #27	ENSTMTG00000002320	NHEJ1 (ENSTMTG00000002315) #29	CNPPD1 (ENSTMTG00000002307) #31	SLC23A3 (ENSTMTG00000002300) #30	ENSTMTG00000002292	ATG9A (ENSTMTG00000002284)	ANKZF1 (ENSTMTG00000002275)	GLB1L (ENSTMTG00000002266)	TUBA4A (ENSTMTG00000002261) #34	ENSTMTG00000002252 #36	PTPRN (ENSTMTG00000002161) #37
Testudinidae	ANCESTRAL SPECIES	8	ENSGT01050000244890.a.b.a.e	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005017881	PNKD (ENSGEVG00005017904)	CATIP (ENSGEVG00005017934)	SLC11A1 (ENSGEVG00005018102) #7	CTDSP1 (ENSGEVG00005018850) #8	VIL1 (ENSGEVG00005018920) #10	USP37 (ENSGEVG00005018974) #11	CNOT9 (ENSGEVG00005019017) #12	PLCD4 (ENSGEVG00005019056) #13	ZNF142 (ENSGEVG00005019203)	BCS1L (ENSGEVG00005019212) #15	RNF25 (ENSGEVG00005019222) #16	STK36 (ENSGEVG00005019246) #18	TTLL4 (ENSGEVG00005019289) #19	CYP27A1 (ENSGEVG00005019336) #20	WNT6 (ENSGEVG00005019474) #22	WNT10A (ENSGEVG00005019480) #23	CDK5R2 (ENSGEVG00005019485) #24	FEV (ENSGEVG00005019492) #25	CRYBA2 (ENSGEVG00005019499) #26	CFAP65 (ENSGEVG00005019513) #27	ENSGEVG00005019538	IHH (ENSGEVG00005019548) #28	NHEJ1 (ENSGEVG00005019555) #29	CNPPD1 (ENSGEVG00005019564) #31	ENSGEVG00005009329	ATG9A (ENSGEVG00005009370)	ANKZF1 (ENSGEVG00005009434)	GLB1L (ENSGEVG00005009632)	STK16 (ENSGEVG00005010501) #33	TUBA4A (ENSGEVG00005010530) #34
Abingdon island giant tortoise	MODERN SPECIES	2420														ENSCABG00000012901 #20	ENSCABG00000012898	WNT6 (ENSCABG00000012895) #22	WNT10A (ENSCABG00000012892) #23	CDK5R2 (ENSCABG00000012886) #24
Chinese turtle	MODERN SPECIES	1849																WNT6 (ENSPSIG00000005250) #22	ENSPSIG00000005226	ENSPSIG00000005207	FEV (ENSPSIG00000005142) #25	CRYBA2 (ENSPSIG00000005083) #26	CFAP65 (ENSPSIG00000004510) #27
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Aves	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000165272.a	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225.o #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000161562 #25	ENSGT00390000008812.a #24	ENSGT00940000165272.a	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Japanese quail	MODERN SPECIES	25	CATIP (ENSCJPG00005013090)	SLC11A1 (ENSCJPG00005013091) #7	CTDSP1 (ENSCJPG00005013092) #8	VIL1 (ENSCJPG00005013096) #10	USP37 (ENSCJPG00005013097) #11	CNOT9 (ENSCJPG00005013098) #12	PLCD4 (ENSCJPG00005013099) #13	ZNF142 (ENSCJPG00005013100)	ENSCJPG00005013101	BCS1L (ENSCJPG00005013102) #15	RNF25 (ENSCJPG00005013103) #16	STK36 (ENSCJPG00005013104) #18	TTLL4 (ENSCJPG00005013105) #19	PRKAG3 (ENSCJPG00005013106) #21	CYP27A1 (ENSCJPG00005013107) #20	WNT6 (ENSCJPG00005013108) #22	WNT10A (ENSCJPG00005013109) #23	CDK5R2 (ENSCJPG00005013110) #24	ENSCJPG00005013111	CRYBA2 (ENSCJPG00005013112) #26	CFAP65 (ENSCJPG00005013114) #27	ENSCJPG00005013115	IHH (ENSCJPG00005013116) #28	NHEJ1 (ENSCJPG00005013117) #29	SLC23A3 (ENSCJPG00005013118) #30	CNPPD1 (ENSCJPG00005013119) #31	ENSCJPG00005013120	ZFAND2B (ENSCJPG00005013121)	ABCB6 (ENSCJPG00005013122)	ATG9A (ENSCJPG00005013123)	ANKZF1 (ENSCJPG00005013124)
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225.o #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916.a #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000161562 #25	ENSGT00390000008812.a #24	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Turkey	MODERN SPECIES	27	ENSMGAG00000011780	ATG9A (ENSMGAG00000012182)	ENSMGAG00000012216	ENSMGAG00000012199	ENSMGAG00000012223	ENSMGAG00000012229 #31	ENSMGAG00000016934	ENSMGAG00000012261 #30	ENSMGAG00000017738 #28	ENSMGAG00000011370 #28	ENSMGAG00000008962 #27	ENSMGAG00000022553	ENSMGAG00000003525 #26	ENSMGAG00000022755 #25	ENSMGAG00000011371 #23	ENSMGAG00000011382 #22	ENSMGAG00000021851 #19	ENSMGAG00000011406 #21	ENSMGAG00000011393 #20	ENSMGAG00000011420 #19	STK36 (ENSMGAG00000011353) #18	BCS1L (ENSMGAG00000011442) #15	RNF25 (ENSMGAG00000011433) #16	ENSMGAG00000020353	ENSMGAG00000011452 #13	ENSMGAG00000011447	ENSMGAG00000011461 #12	ENSMGAG00000021644 #12	ENSMGAG00000011465 #11	ENSMGAG00000011483 #10	ENSMGAG00000011495 #8
Chicken	MODERN SPECIES	36	SLC11A1 (ENSGALG00010021140) #7	ENSGALG00010022204 #7	TMBIM1 (ENSGALG00010019127)	CTDSP1 (ENSGALG00010018986) #8	VIL1 (ENSGALG00010019011) #10	USP37 (ENSGALG00010021193) #11	CNOT9 (ENSGALG00010021663) #12	PLCD4 (ENSGALG00010021634) #13	ZNF142 (ENSGALG00010021626)	BCS1L (ENSGALG00010021612) #15	RNF25 (ENSGALG00010021588) #16	STK36 (ENSGALG00010021582) #18	TTLL4 (ENSGALG00010021574) #19	PRKAG3 (ENSGALG00010021564) #21	CYP27A1 (ENSGALG00010021541) #20	WNT6 (ENSGALG00010021142) #22	WNT10A (ENSGALG00010021151) #23	FEV (ENSGALG00010021226) #25	CDK5R2 (ENSGALG00010021205) #24	CRYBA2 (ENSGALG00010021198) #26	CFAP65 (ENSGALG00010018110) #27	ENSGALG00010018369	IHH (ENSGALG00010021505) #28	NHEJ1 (ENSGALG00010022224) #29	SLC23A3 (ENSGALG00010021501) #30	CNPPD1 (ENSGALG00010021489) #31	ENSGALG00010021480	ZFAND2B (ENSGALG00010021477)	ABCB6 (ENSGALG00010021465)	ATG9A (ENSGALG00010021444)	ANKZF1 (ENSGALG00010021434)
Anatidae	ANCESTRAL SPECIES	37					ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000161562 #25	ENSGT00940000160306.c #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00940000154311.a.b.l.a
Pink-footed goose	MODERN SPECIES	25					VIL1 (ENSABRG00000022126) #10	USP37 (ENSABRG00000022136) #11	CNOT9 (ENSABRG00000022140) #12	PLCD4 (ENSABRG00000022142) #13	ZNF142 (ENSABRG00000022143)	BCS1L (ENSABRG00000022145) #15	RNF25 (ENSABRG00000022147) #16	STK36 (ENSABRG00000022150) #18	TTLL4 (ENSABRG00000022158) #19	PRKAG3 (ENSABRG00000022188) #21	CYP27A1 (ENSABRG00000022301) #20	WNT6 (ENSABRG00000022302) #22	WNT10A (ENSABRG00000022303) #23	FEV (ENSABRG00000022306) #25	CRYBA2 (ENSABRG00000022308) #26	CFAP65 (ENSABRG00000022312) #27	ENSABRG00000022313	IHH (ENSABRG00000022314) #28	NHEJ1 (ENSABRG00000022315) #29	SLC23A3 (ENSABRG00000022316) #30	CNPPD1 (ENSABRG00000022318) #31	ENSABRG00000000228	ZFAND2B (ENSABRG00000000245)	ABCB6 (ENSABRG00000000266)	ATG9A (ENSABRG00000000296)	ANKZF1 (ENSABRG00000000325)	ENSABRG00000000352
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Golden eagle	MODERN SPECIES	22	CATIP (ENSACCG00020001823)	SLC11A1 (ENSACCG00020001785) #7	CTDSP1 (ENSACCG00020001726) #8	VIL1 (ENSACCG00020001336) #10	USP37 (ENSACCG00020001017) #11	CNOT9 (ENSACCG00020000973) #12	PLCD4 (ENSACCG00020000937) #13	ZNF142 (ENSACCG00020000894)	BCS1L (ENSACCG00020000859) #15	RNF25 (ENSACCG00020000835) #16	ENSACCG00020000814 #18	ENSACCG00020000793 #18	TTLL4 (ENSACCG00020000754) #19	PRKAG3 (ENSACCG00020000717) #21	CYP27A1 (ENSACCG00020000675) #20	WNT6 (ENSACCG00020000635) #22	WNT10A (ENSACCG00020000606) #23	CDK5R2 (ENSACCG00020000556) #24	ENSACCG00020000542	CRYBA2 (ENSACCG00020000511) #26	ENSACCG00020000487	CFAP65 (ENSACCG00020000455) #27	ENSACCG00020000407	IHH (ENSACCG00020000390) #28	NHEJ1 (ENSACCG00020000372) #29	CNPPD1 (ENSACCG00020000361) #31	ENSACCG00020000334	ZFAND2B (ENSACCG00020000313)	ABCB6 (ENSACCG00020014210)	ATG9A (ENSACCG00020013685)	ANKZF1 (ENSACCG00020013653)
Kakapo	MODERN SPECIES	22	SLC11A1 (ENSSHBG00005011978) #7	CTDSP1 (ENSSHBG00005012010) #8	VIL1 (ENSSHBG00005012034) #10	USP37 (ENSSHBG00005012063) #11	CNOT9 (ENSSHBG00005012091) #12	PLCD4 (ENSSHBG00005012127) #13	ENSSHBG00005012179 #14	ZNF142 (ENSSHBG00005012200)	BCS1L (ENSSHBG00005012242) #15	RNF25 (ENSSHBG00005012291) #16	ENSSHBG00005012316 #18	ENSSHBG00005012338 #18	TTLL4 (ENSSHBG00005012360) #19	PRKAG3 (ENSSHBG00005012380) #21	CYP27A1 (ENSSHBG00005012405) #20	WNT6 (ENSSHBG00005012420) #22	WNT10A (ENSSHBG00005012434) #23	CDK5R2 (ENSSHBG00005012446) #24	FEV (ENSSHBG00005012458) #25	CRYBA2 (ENSSHBG00005012469) #26	CFAP65 (ENSSHBG00005012510) #27	ENSSHBG00005012563	IHH (ENSSHBG00005012576) #28	NHEJ1 (ENSSHBG00005012587) #29	SLC23A3 (ENSSHBG00005012598) #30	CNPPD1 (ENSSHBG00005012612) #31	ENSSHBG00005012628	ABCB6 (ENSSHBG00005012658)	ATG9A (ENSSHBG00005012674)	ENSSHBG00005012687	GLB1L (ENSSHBG00005012712)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT01040000242059	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b	ENSGT00390000005911
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00390000001557 #16	ENSGT00940000158375 #18	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000165272.a	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000159648	ENSGT00940000156160	ENSGT00390000014839.b
Zebra finch	MODERN SPECIES	29	TMBIM1 (ENSTGUG00000005261)	PNKD (ENSTGUG00000005290)	SLC11A1 (ENSTGUG00000005297) #7	CTDSP1 (ENSTGUG00000021628) #8	VIL1 (ENSTGUG00000005367) #10	USP37 (ENSTGUG00000005444) #11	CNOT9 (ENSTGUG00000005493) #12	PLCD4 (ENSTGUG00000005509) #13	ZNF142 (ENSTGUG00000005552)	BCS1L (ENSTGUG00000005562) #15	RNF25 (ENSTGUG00000005569) #16	STK36 (ENSTGUG00000020080) #18	CYP27A1 (ENSTGUG00000005641) #20	TTLL4 (ENSTGUG00000005577) #19	PRKAG3 (ENSTGUG00000005596) #21	WNT6 (ENSTGUG00000005662) #22	WNT10A (ENSTGUG00000019647) #23	FEV (ENSTGUG00000027918) #25	CRYBA2 (ENSTGUG00000005681) #26	CFAP65 (ENSTGUG00000005692) #27	ENSTGUG00000005702	IHH (ENSTGUG00000027388) #28	NHEJ1 (ENSTGUG00000005688) #29	SLC23A3 (ENSTGUG00000005708) #30	CNPPD1 (ENSTGUG00000022677) #31	ENSTGUG00000005734	ZFAND2B (ENSTGUG00000005746)	ABCB6 (ENSTGUG00000005757)	ATG9A (ENSTGUG00000005783)	ANKZF1 (ENSTGUG00000005834)	GLB1L (ENSTGUG00000005849)
Common canary	MODERN SPECIES	8	PNKD (ENSSCAG00000012879)	CATIP (ENSSCAG00000012930)	SLC11A1 (ENSSCAG00000012937) #7	CTDSP1 (ENSSCAG00000012952) #8	VIL1 (ENSSCAG00000013018) #10	USP37 (ENSSCAG00000013031) #11	CNOT9 (ENSSCAG00000013041) #12	PLCD4 (ENSSCAG00000013045) #13	ZNF142 (ENSSCAG00000013052)	BCS1L (ENSSCAG00000013059) #15	RNF25 (ENSSCAG00000013063) #16	STK36 (ENSSCAG00000013070) #18	TTLL4 (ENSSCAG00000013100) #19	PRKAG3 (ENSSCAG00000013178) #21	CYP27A1 (ENSSCAG00000013191) #20	WNT6 (ENSSCAG00000013214) #22	WNT10A (ENSSCAG00000013224) #23	ENSSCAG00000013228 #24	ENSSCAG00000013230	CRYBA2 (ENSSCAG00000013238) #26	CFAP65 (ENSSCAG00000013251) #27	ENSSCAG00000013275	IHH (ENSSCAG00000013282) #28	NHEJ1 (ENSSCAG00000013292) #29	CNPPD1 (ENSSCAG00000013298) #31	ENSSCAG00000013309	ZFAND2B (ENSSCAG00000013312)	ABCB6 (ENSSCAG00000013361)	ATG9A (ENSSCAG00000013482)	ANKZF1 (ENSSCAG00000013491)	GLB1L (ENSSCAG00000013499)
Medium ground finch	MODERN SPECIES	1	PNKD (ENSGFOG00000000614)	CATIP (ENSGFOG00000000620)	SLC11A1 (ENSGFOG00000000632) #7	CTDSP1 (ENSGFOG00000000644) #8	VIL1 (ENSGFOG00000000774) #10	USP37 (ENSGFOG00000002319) #11	CNOT9 (ENSGFOG00000002368) #12	PLCD4 (ENSGFOG00000002408) #13	ZNF142 (ENSGFOG00000002473)	BCS1L (ENSGFOG00000002536) #15	RNF25 (ENSGFOG00000002561) #16	ENSGFOG00000002578 #18	TTLL4 (ENSGFOG00000002599) #19	PRKAG3 (ENSGFOG00000002635) #21	CYP27A1 (ENSGFOG00000002744) #20	WNT6 (ENSGFOG00000003972) #22	WNT10A (ENSGFOG00000003984) #23	ENSGFOG00000003993 #24	FEV (ENSGFOG00000004000) #25	CRYBA2 (ENSGFOG00000004005) #26	CFAP65 (ENSGFOG00000004022) #27	ENSGFOG00000004052	IHH (ENSGFOG00000004061) #28	NHEJ1 (ENSGFOG00000004070) #29	ENSGFOG00000004082 #30	CNPPD1 (ENSGFOG00000004097) #31	ENSGFOG00000004108	ZFAND2B (ENSGFOG00000004121)	ABCB6 (ENSGFOG00000004131)	ATG9A (ENSGFOG00000004143)	ANKZF1 (ENSGFOG00000004160)
Flycatcher	MODERN SPECIES	26	PNKD (ENSFALG00000004028)	CATIP (ENSFALG00000004038)	SLC11A1 (ENSFALG00000004041) #7	VIL1 (ENSFALG00000004061) #10	USP37 (ENSFALG00000004072) #11	CNOT9 (ENSFALG00000024424) #12	ENSFALG00000004046 #8	PLCD4 (ENSFALG00000004084) #13	ZNF142 (ENSFALG00000004099)	BCS1L (ENSFALG00000004106) #15	RNF25 (ENSFALG00000004112) #16	STK36 (ENSFALG00000004118) #18	TTLL4 (ENSFALG00000004135) #19	ENSFALG00000004143 #21	ENSFALG00000004152 #20	WNT6 (ENSFALG00000024670) #22	WNT10A (ENSFALG00000004164) #23	ENSFALG00000028569 #24	FEV (ENSFALG00000028150) #25	CRYBA2 (ENSFALG00000004167) #26	CFAP65 (ENSFALG00000004169) #27	ENSFALG00000004173	IHH (ENSFALG00000023942) #28	NHEJ1 (ENSFALG00000004177) #29	SLC23A3 (ENSFALG00000004181) #30	CNPPD1 (ENSFALG00000004186) #31	ENSFALG00000025933	ZFAND2B (ENSFALG00000004199)	ATG9A (ENSFALG00000004205)	ANKZF1 (ENSFALG00000004219)	STK16 (ENSFALG00000027114) #33
Great tit	MODERN SPECIES	27	CATIP (ENSPMJG00000019747)	SLC11A1 (ENSPMJG00000019746) #7	CTDSP1 (ENSPMJG00000019745) #8	VIL1 (ENSPMJG00000019744) #10	USP37 (ENSPMJG00000019743) #11	CNOT9 (ENSPMJG00000019742) #12	PLCD4 (ENSPMJG00000019741) #13	ZNF142 (ENSPMJG00000019740)	BCS1L (ENSPMJG00000019739) #15	RNF25 (ENSPMJG00000019738) #16	ENSPMJG00000019737 #18	ENSPMJG00000019736 #18	TTLL4 (ENSPMJG00000019735) #19	PRKAG3 (ENSPMJG00000019734) #21	CYP27A1 (ENSPMJG00000019733) #20	WNT6 (ENSPMJG00000019732) #22	WNT10A (ENSPMJG00000019731) #23	CDK5R2 (ENSPMJG00000019730) #24	FEV (ENSPMJG00000019729) #25	CRYBA2 (ENSPMJG00000019728) #26	CFAP65 (ENSPMJG00000019726) #27	ENSPMJG00000019725	IHH (ENSPMJG00000019724) #28	NHEJ1 (ENSPMJG00000019723) #29	ENSPMJG00000019722	SLC23A3 (ENSPMJG00000019721) #30	CNPPD1 (ENSPMJG00000019720) #31	ENSPMJG00000019719	ZFAND2B (ENSPMJG00000019718)	ABCB6 (ENSPMJG00000019717)	ATG9A (ENSPMJG00000019716)
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000155522	ENSGT00390000003164	ENSGT00940000154095.b.b #37	ENSGT00940000160220 #36	ENSGT00950000182825.A.a.b.b	ENSGT00950000183165.a #34	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375 #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15	ENSGT00940000163074
Episquamata	ANCESTRAL SPECIES		ENSGT00390000003164	ENSGT00940000154095.b.b #37	ENSGT00940000160220 #36	ENSGT00950000182825.A.a.b.b	ENSGT00950000183165.a #34	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00940000154610.e.a	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000153313.C.a.g.b	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375 #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000160220.l.b #36	ENSGT01030000235385	ENSGT00940000160220.k.a.b #36	ENSGT00950000182825.A.a.b.b	ENSGT00950000183165.a #34	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00940000154610.e.a	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000153313.C.a.g.b	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375 #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15
Common wall lizard	MODERN SPECIES		ENSPMRG00000017397 #36	ENSPMRG00000017401 #36	ENSPMRG00000017410	TUBA4A (ENSPMRG00000017419) #34	STK16 (ENSPMRG00000017426) #33	GLB1L (ENSPMRG00000017544)	ENSPMRG00000018223	ATG9A (ENSPMRG00000018228)	ABCB6 (ENSPMRG00000018352)	ZFAND2B (ENSPMRG00000018763)	ENSPMRG00000018770	TTLL4 (ENSPMRG00000018791) #19	PRKAG3 (ENSPMRG00000018875) #21	ENSPMRG00000018886	CYP27A1 (ENSPMRG00000018895) #20	WNT6 (ENSPMRG00000018904) #22	WNT10A (ENSPMRG00000018911) #23	ENSPMRG00000018918	CDK5R2 (ENSPMRG00000018924) #24	FEV (ENSPMRG00000018929) #25	CRYBA2 (ENSPMRG00000018935) #26	CFAP65 (ENSPMRG00000018982) #27	ENSPMRG00000019092	TEX12 (ENSPMRG00000019095)	IHH (ENSPMRG00000019097) #28	ENSPMRG00000019100	STK36 (ENSPMRG00000019111) #18	RNF25 (ENSPMRG00000019124) #16	BCS1L (ENSPMRG00000019126) #15	ZNF142 (ENSPMRG00000019149)	PLCD4 (ENSPMRG00000019242) #13
Argentine black and white tegu	MODERN SPECIES	27	ENSSMRG00000010938	ENSSMRG00000010940 #36	ENSSMRG00000010980 #36	ENSSMRG00000010981	ENSSMRG00000010989	STK16 (ENSSMRG00000010993) #33	GLB1L (ENSSMRG00000010997)	ANKZF1 (ENSSMRG00000010999)	ATG9A (ENSSMRG00000011058)	ABCB6 (ENSSMRG00000011060)	ZFAND2B (ENSSMRG00000011062)	TTLL4 (ENSSMRG00000011158) #19	ENSSMRG00000011168 #21	ENSSMRG00000011176	CYP27A1 (ENSSMRG00000011179) #20	WNT6 (ENSSMRG00000011181) #22	WNT10A (ENSSMRG00000011184) #23	ENSSMRG00000011189	CDK5R2 (ENSSMRG00000011191) #24	FEV (ENSSMRG00000011194) #25	CRYBA2 (ENSSMRG00000011195) #26	CFAP65 (ENSSMRG00000011232) #27	ENSSMRG00000011242	IHH (ENSSMRG00000011251) #28	NHEJ1 (ENSSMRG00000011260) #29	SLC23A3 (ENSSMRG00000011273) #30	CNPPD1 (ENSSMRG00000011276) #31	ENSSMRG00000011279	STK36 (ENSSMRG00000011282) #18	RNF25 (ENSSMRG00000011285) #16	ENSSMRG00000011288
Toxicofera	ANCESTRAL SPECIES	10	ENSGT00940000154095.b.b #37	ENSGT00940000160220 #36	ENSGT00950000182825.A.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000161420	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00940000154610.e.a	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000153313.C.a.g.b	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375 #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15
Elapidae	ANCESTRAL SPECIES		ENSGT00940000160220 #36	ENSGT00950000182825.A.a.b.b	ENSGT00950000183165.b.a ##34	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000161420	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00940000154610.e.a	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000153313.C.a.g.b	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375.m.a #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00940000155522	ENSGT00390000003164	ENSGT00940000154095.b.b #37	ENSGT00940000160220 #36	ENSGT00950000183165.b.a ##34	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000153313.C.a.g.b	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375.m.a #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000155522	ENSGT00390000003164	ENSGT00940000154095.b.b #37	ENSGT00940000160220 #36	ENSGT00950000183165.b.a ##34	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00550000075037 #33	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000156160	ENSGT00940000159648	ENSGT00940000157916 #19	ENSGT00950000183019.f.b.b #21	ENSGT00950000182905.a.a.a.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00940000153313.C.a.g.b	ENSGT00390000008812.a #24	ENSGT00940000161562 #25	ENSGT00940000160306 #26	ENSGT00430000031142 #27	ENSGT00940000160059.a.b	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00390000000862 #31	ENSGT00940000164110	ENSGT00940000158375.m.a #18	ENSGT00390000001557 #16	ENSGT00390000005415 #15
Mainland tiger snake	MODERN SPECIES	12	DNPEP (ENSNSUG00000012398)	PTPRN (ENSNSUG00000012396) #37	ENSNSUG00000012395 #36	ENSNSUG00000012394 #36	ENSNSUG00000012393 ##34	ENSNSUG00000012392	STK16 (ENSNSUG00000012390) #33	GLB1L (ENSNSUG00000012388)	ANKZF1 (ENSNSUG00000012385)	ATG9A (ENSNSUG00000012383)	ABCB6 (ENSNSUG00000012174)	ZFAND2B (ENSNSUG00000012172)	TTLL4 (ENSNSUG00000012171) #19	ENSNSUG00000012162 #21	CYP27A1 (ENSNSUG00000012160) #20	WNT6 (ENSNSUG00000012159) #22	WNT10A (ENSNSUG00000012158) #23	ENSNSUG00000012157	CDK5R2 (ENSNSUG00000012156) #24	FEV (ENSNSUG00000012155) #25	CRYBA2 (ENSNSUG00000012153) #26	CFAP65 (ENSNSUG00000012149) #27	ENSNSUG00000012148	IHH (ENSNSUG00000012147) #28	NHEJ1 (ENSNSUG00000012145) #29	SLC23A3 (ENSNSUG00000012142) #30	CNPPD1 (ENSNSUG00000012140) #31	ENSNSUG00000012138	ENSNSUG00000012137 #18	ENSNSUG00000012136 #18	RNF25 (ENSNSUG00000012135) #16
Eastern brown snake	MODERN SPECIES	37	PTPRN (ENSPTXG00000008736) #37	ENSPTXG00000008733 #36	ENSPTXG00000008732	ENSPTXG00000008731 #36	ENSPTXG00000008730	ENSPTXG00000008728 ##35	STK16 (ENSPTXG00000008727) #33	GLB1L (ENSPTXG00000008726)	ENSPTXG00000008725	ATG9A (ENSPTXG00000008724)	ABCB6 (ENSPTXG00000008723)	ZFAND2B (ENSPTXG00000008722)	TTLL4 (ENSPTXG00000008721) #19	ENSPTXG00000008719 #21	CYP27A1 (ENSPTXG00000008046) #20	WNT6 (ENSPTXG00000008043) #22	WNT10A (ENSPTXG00000008042) #23	ENSPTXG00000008041	CDK5R2 (ENSPTXG00000008040) #24	FEV (ENSPTXG00000008038) #25	CRYBA2 (ENSPTXG00000008037) #26	CFAP65 (ENSPTXG00000008036) #27	ENSPTXG00000008035	IHH (ENSPTXG00000008034) #28	NHEJ1 (ENSPTXG00000008033) #29	CNPPD1 (ENSPTXG00000008032) #31	ENSPTXG00000008031	ENSPTXG00000008030 #18	ENSPTXG00000008029 #18	RNF25 (ENSPTXG00000008028) #16	BCS1L (ENSPTXG00000008027) #15
Blue-lipped sea krait	MODERN SPECIES	1233																WNT6 (ENSLLTG00000000857) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000016349 #36	ENSNNAG00000016345	ENSNNAG00000016337 ##35	GLB1L (ENSNNAG00000016292)	STK16 (ENSNNAG00000016279) #33	ANKZF1 (ENSNNAG00000016257)	ATG9A (ENSNNAG00000016226)	ABCB6 (ENSNNAG00000016154)	ENSNNAG00000016138	ZFAND2B (ENSNNAG00000016122)	TTLL4 (ENSNNAG00000016036) #19	ENSNNAG00000016019 #21	ENSNNAG00000016007	ENSNNAG00000015996	CYP27A1 (ENSNNAG00000015982) #20	WNT6 (ENSNNAG00000015967) #22	WNT10A (ENSNNAG00000015947) #23	ENSNNAG00000015938	CDK5R2 (ENSNNAG00000015929) #24	FEV (ENSNNAG00000015925) #25	ENSNNAG00000015915 #26	ENSNNAG00000015900 #26	CFAP65 (ENSNNAG00000015695) #27	ENSNNAG00000015659	IHH (ENSNNAG00000015652) #28	NHEJ1 (ENSNNAG00000015640) #29	ENSNNAG00000015544	ENSNNAG00000015476	STK36 (ENSNNAG00000015420) #18	RNF25 (ENSNNAG00000015392) #16	BCS1L (ENSNNAG00000015374) #15
Lizard	MODERN SPECIES	17																WNT6 (ENSACAG00000045486) #22
tuatara	MODERN SPECIES	1842						ENSSPUG00000015264	STK16 (ENSSPUG00000015274) #33	GLB1L (ENSSPUG00000015303)	ENSSPUG00000015386	ATG9A (ENSSPUG00000015399)	ABCB6 (ENSSPUG00000015447)	ENSSPUG00000015474	TTLL4 (ENSSPUG00000015501) #19	PRKAG3 (ENSSPUG00000015530) #21	CYP27A1 (ENSSPUG00000015557) #20	WNT6 (ENSSPUG00000015572) #22	WNT10A (ENSSPUG00000015583) #23	CDK5R2 (ENSSPUG00000015590) #24	FEV (ENSSPUG00000015600) #25
Anura	ANCESTRAL SPECIES	41	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887	ENSGT00940000154101.a	ENSGT00940000160799 #7	ENSGT01040000240451.a.a #8	ENSGT00940000160544 #10	ENSGT00940000158091 #11	ENSGT00390000001225 #12	ENSGT00940000156180 #13	ENSGT00940000163074	ENSGT00390000005415 #15	ENSGT00950000182905.a.a.a.a.b.b #20	ENSGT00950000182905.a.a.a.a.b.a.a #20	ENSGT00950000182905.a.a.a.a.b.a.b #20	ENSGT00940000159281 #22	ENSGT00940000160299 #23	ENSGT00390000008812.a.c #24	ENSGT00940000161562 #25	ENSGT00430000031142 #27	ENSGT00940000164719	ENSGT00940000159207 #28	ENSGT00390000009940 #29	ENSGT00950000182953.A #30	ENSGT00950000183019.f.b.b #21	ENSGT00940000157916 #19	ENSGT00390000000862 #31	ENSGT00940000156160	ENSGT00940000164110	ENSGT00940000159052	ENSGT00940000154610.e.a
Frog	MODERN SPECIES	9	pnkd (ENSXETG00000014931)	catip (ENSXETG00000014934)	XB5731801 [provisional] (ENSXETG00000025029)	slc11a1 (ENSXETG00000014937) #7	ctdsp1 (ENSXETG00000041437) #8	vil1 (ENSXETG00000014965) #10	usp37 (ENSXETG00000014977) #11	cnot9 (ENSXETG00000014984) #12	plcd4 (ENSXETG00000013830) #13	znf142 (ENSXETG00000035207)	bcs1l (ENSXETG00000013844) #15	cyp27a1.3 (ENSXETG00000039601) #20	grsf1 (ENSXETG00000013850)	XB1001094 [provisional:cyp27a1] (ENSXETG00000038396) #20	XB984297 [provisional:cyp27a1] (ENSXETG00000013846) #20	wnt6 (ENSXETG00000045993) #22	wnt10a (ENSXETG00000048038) #23	cdk5r2 (ENSXETG00000039048) #24	fev (ENSXETG00000033826) #25	cryba2 (ENSXETG00000013865) #26	cfap65 (ENSXETG00000013869) #27	ENSXETG00000040115	ihh (ENSXETG00000038561) #28	nhej1 (ENSXETG00000025012) #29	slc23a3 (ENSXETG00000013878) #30	prkag3 (ENSXETG00000013879) #21	ttll4 (ENSXETG00000013887) #19	cnppd1 (ENSXETG00000042782) #31	abcb6 (ENSXETG00000013892)	retreg2 (ENSXETG00000013896)	asic4 (ENSXETG00000042138)
Leishan spiny toad	MODERN SPECIES	10	ENSLLEG00000014618 ##8	VIL1 (ENSLLEG00000014708) #10	ENSLLEG00000015413 #20	ENSLLEG00000015490 #20	BCS1L (ENSLLEG00000015574) #15	ZNF142 (ENSLLEG00000015806)	PLCD4 (ENSLLEG00000015894) #13	ENSLLEG00000016121	CNOT9 (ENSLLEG00000016152) #12	USP37 (ENSLLEG00000016557) #11	ENSLLEG00000016985 #20	ENSLLEG00000017106 #20	ENSLLEG00000017199 #20	ENSLLEG00000017283 #20	ENSLLEG00000017385	WNT6 (ENSLLEG00000017419) #22	ENSLLEG00000017474	WNT10A (ENSLLEG00000017506) #23	ENSLLEG00000017586	CDK5R2 (ENSLLEG00000017606) #24	ENSLLEG00000017645	CRYBA2 (ENSLLEG00000017668) #26	FEV (ENSLLEG00000017799) #25	ENSLLEG00000017900 #27	ENSLLEG00000018807	IHH (ENSLLEG00000018841) #28	NHEJ1 (ENSLLEG00000018925) #29	ENSLLEG00000019027 #21	ENSLLEG00000019488	ENSLLEG00000019551 #19	ENSLLEG00000020071