Mus	ANCESTRAL SPECIES	1	ENSGT00940000162354	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a	ENSGT00950000182909.b.b.a	ENSGT00530000063956.a	ENSGT00940000157210	ENSGT00940000158019	ENSGT00940000153709.A	ENSGT00940000154899	ENSGT00940000155154.b	ENSGT00550000074997	ENSGT00940000157304	ENSGT00550000074884	ENSGT00940000158950	ENSGT00940000159925 #20	ENSGT00940000159151 #22	ENSGT00950000183021.a.b #23	ENSGT00940000154897 #24	ENSGT00950000182978.A.a.b.b #25	ENSGT00940000159430 #26	ENSGT00390000012914 #27	ENSGT01030000234550.a.b #28	ENSGT00940000153269.b.a #29	ENSGT00940000163620 #30	ENSGT00940000164035 #31	ENSGT00940000159236 #32	ENSGT00510000048078 #33	ENSGT00940000159376 #34	ENSGT00860000136126 #35	ENSGT00940000161464 #36	ENSGT00530000064134.a.b #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000162354	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a	ENSGT00950000182909.b.b.a	ENSGT00530000063956.a	ENSGT00940000157210	ENSGT00940000158019	ENSGT00940000153709.A	ENSGT00940000154899	ENSGT00940000155154.b	ENSGT00550000074997	ENSGT00940000157304	ENSGT00550000074884	ENSGT00940000158950	ENSGT00940000159925 #20	ENSGT00940000159151 #22	ENSGT00950000183021.a.b #23	ENSGT00940000154897.k #24	ENSGT00950000182978.A.a.b.b #25	ENSGT00940000159430 #26	ENSGT00390000012914 #27	ENSGT01030000234550.a.b #28	ENSGT00940000153269.b.a #29	ENSGT00940000163620 #30	ENSGT00940000164035 #31	ENSGT00940000159236 #32	ENSGT00510000048078 #33	ENSGT00940000159376 #34	ENSGT00860000136126 #35	ENSGT00940000161464 #36	ENSGT00530000064134.a.b #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000162354	ENSGT00940000158854.ib.b.b	ENSGT00940000154681.a	ENSGT00950000182909.b.b.a	ENSGT00530000063956.a	ENSGT00940000157210	ENSGT00940000158019	ENSGT00940000153709.A	ENSGT00940000154899	ENSGT00940000155154.b	ENSGT00550000074997	ENSGT00940000157304	ENSGT00550000074884	ENSGT00940000158950	ENSGT00940000159925 #20	ENSGT00940000159151 #22	ENSGT00950000183021.a.b #23	ENSGT00940000154897.k #24	ENSGT00950000182978.A.a.b.b #25	ENSGT00940000159430 #26	ENSGT00390000012914 #27	ENSGT01030000234550.a.b #28	ENSGT00940000153269.b.a #29	ENSGT00940000163620 #30	ENSGT00940000164035 #31	ENSGT00940000159236 #32	ENSGT00510000048078 #33	ENSGT00940000159376 #34	ENSGT00860000136126 #35	ENSGT00940000161464 #36	ENSGT00530000064134.a.b #37
Mus_C	ANCESTRAL SPECIES										ENSGT00960000193069	ENSGT00940000155154.b	ENSGT00550000074997	ENSGT00940000157304	ENSGT00550000074884	ENSGT00940000158950	ENSGT00940000159925 #20	ENSGT00940000159151 #22	ENSGT00950000183021.a.b #23	ENSGT00940000154897.k #24	ENSGT00950000182978.A.a.b.b #25	ENSGT00940000159430 #26	ENSGT00390000012914 #27	ENSGT01030000234550.a.b #28	ENSGT00940000153269.b.a #29	ENSGT00940000163620 #30	ENSGT00940000164035 #31	ENSGT00940000159236 #32	ENSGT00510000048078 #33	ENSGT00940000159376 #34	ENSGT00860000136126 #35	ENSGT00940000161464 #36	ENSGT00530000064134.a.b #37
Steppe mouse	MODERN SPECIES	3250														Prex1 (ENSMSIG00000024286) #20	ENSMSIG00000024281 #21	Sulf2 (ENSMSIG00000024212) #22	Ncoa3 (ENSMSIG00000024153) #23	Zmynd8 (ENSMSIG00000023346) #24	Eya2 (ENSMSIG00000023297) #25	Slc2a10 (ENSMSIG00000023276) #26	ENSMSIG00000023259 #27	Slc13a3 (ENSMSIG00000023199) #28	Ocstamp (ENSMSIG00000023191) #29	Zfp334 (ENSMSIG00000023168) #30	Zfp663 (ENSMSIG00000023150) #31	Elmo2 (ENSMSIG00000023029) #32	Slc35c2 (ENSMSIG00000023010) #33	Cdh22 (ENSMSIG00000022963) #34	1700025C18Rik (ENSMSIG00000022944) #35	ENSMSIG00000022924 #36	Ncoa5 (ENSMSIG00000022896) #37
spretus	MODERN SPECIES	11	Snai1 (MGP_SPRETEiJ_G0025629)	Rnf114 (MGP_SPRETEiJ_G0025628)	Spata2 (MGP_SPRETEiJ_G0025627)	Slc9a8 (MGP_SPRETEiJ_G0025626)	B4galt5 (MGP_SPRETEiJ_G0025625)	Ptgis (MGP_SPRETEiJ_G0025624)	Kcnb1 (MGP_SPRETEiJ_G0025623)	MGP_SPRETEiJ_G0025622	Znfx1 (MGP_SPRETEiJ_G0025621)	Ddx27 (MGP_SPRETEiJ_G0025620)	Stau1 (MGP_SPRETEiJ_G0025619)	Cse1l (MGP_SPRETEiJ_G0025618)	Arfgef2 (MGP_SPRETEiJ_G0025617)	MGP_SPRETEiJ_G0025616 #27	Prex1 (MGP_SPRETEiJ_G0025615) #20	Sulf2 (MGP_SPRETEiJ_G0025614) #22	Ncoa3 (MGP_SPRETEiJ_G0025613) #23	Zmynd8 (MGP_SPRETEiJ_G0025612) #24	Eya2 (MGP_SPRETEiJ_G0025611) #25	Slc2a10 (MGP_SPRETEiJ_G0025610) #26	MGP_SPRETEiJ_G0025609 #27	Slc13a3 (MGP_SPRETEiJ_G0025608) #28	Ocstamp (MGP_SPRETEiJ_G0025607) #29	Zfp334 (MGP_SPRETEiJ_G0025606) #30	Zfp663 (MGP_SPRETEiJ_G0025605) #31	Elmo2 (MGP_SPRETEiJ_G0025604) #32	Slc35c2 (MGP_SPRETEiJ_G0025603) #33	Cdh22 (MGP_SPRETEiJ_G0025602) #34	1700025C18Rik (MGP_SPRETEiJ_G0025601) #35	Cd40 (MGP_SPRETEiJ_G0025600) #36	Ncoa5 (MGP_SPRETEiJ_G0025599) #37
Mouse	MODERN SPECIES	11	Ube2v1 (ENSMUSG00000078923)	Snai1 (ENSMUSG00000042821)	Rnf114 (ENSMUSG00000006418)	Spata2 (ENSMUSG00000047030)	Slc9a8 (ENSMUSG00000039463)	B4galt5 (ENSMUSG00000017929)	Ptgis (ENSMUSG00000017969)	Kcnb1 (ENSMUSG00000050556)	Znfx1 (ENSMUSG00000039501)	Ddx27 (ENSMUSG00000017999)	Stau1 (ENSMUSG00000039536)	Cse1l (ENSMUSG00000002718)	Arfgef2 (ENSMUSG00000074582)	Trp53rkb (ENSMUSG00000042854) #27	Prex1 (ENSMUSG00000039621) #20	Sulf2 (ENSMUSG00000006800) #22	Ncoa3 (ENSMUSG00000027678) #23	Zmynd8 (ENSMUSG00000039671) #24	Eya2 (ENSMUSG00000017897) #25	Slc2a10 (ENSMUSG00000027661) #26	Trp53rka (ENSMUSG00000039725) #27	Slc13a3 (ENSMUSG00000018459) #28	Ocstamp (ENSMUSG00000027670) #29	Zfp334 (ENSMUSG00000017667) #30	Zfp663 (ENSMUSG00000056824) #31	Elmo2 (ENSMUSG00000017670) #32	Slc35c2 (ENSMUSG00000017664) #33	Cdh22 (ENSMUSG00000053166) #34	1700025C18Rik (ENSMUSG00000078935) #35	Cd40 (ENSMUSG00000017652) #36	Ncoa5 (ENSMUSG00000039804) #37
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0024710	Snai1 (MGP_CAROLIEiJ_G0024709)	Rnf114 (MGP_CAROLIEiJ_G0024708)	Spata2 (MGP_CAROLIEiJ_G0024707)	Slc9a8 (MGP_CAROLIEiJ_G0024706)	B4galt5 (MGP_CAROLIEiJ_G0024705)	Ptgis (MGP_CAROLIEiJ_G0024704)	Kcnb1 (MGP_CAROLIEiJ_G0024703)	MGP_CAROLIEiJ_G0024702	Znfx1 (MGP_CAROLIEiJ_G0024701)	Ddx27 (MGP_CAROLIEiJ_G0024700)	Stau1 (MGP_CAROLIEiJ_G0024699)	Cse1l (MGP_CAROLIEiJ_G0024698)	Arfgef2 (MGP_CAROLIEiJ_G0024697)	Prex1 (MGP_CAROLIEiJ_G0024696) #20	Sulf2 (MGP_CAROLIEiJ_G0024695) #22	Ncoa3 (MGP_CAROLIEiJ_G0024694) #23	Zmynd8 (MGP_CAROLIEiJ_G0024693) #24	Eya2 (MGP_CAROLIEiJ_G0024692) #25	Slc2a10 (MGP_CAROLIEiJ_G0024691) #26	MGP_CAROLIEiJ_G0024689 #27	Slc13a3 (MGP_CAROLIEiJ_G0024688) #28	Ocstamp (MGP_CAROLIEiJ_G0024687) #29	Zfp334 (MGP_CAROLIEiJ_G0024686) #30	Zfp663 (MGP_CAROLIEiJ_G0024685) #31	Elmo2 (MGP_CAROLIEiJ_G0024684) #32	Slc35c2 (MGP_CAROLIEiJ_G0024683) #33	Cdh22 (MGP_CAROLIEiJ_G0024682) #34	MGP_CAROLIEiJ_G0024681 #35	Cd40 (MGP_CAROLIEiJ_G0024680) #36	Ncoa5 (MGP_CAROLIEiJ_G0024679) #37
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0026152	Snai1 (MGP_PahariEiJ_G0026151)	Rnf114 (MGP_PahariEiJ_G0026150)	Spata2 (MGP_PahariEiJ_G0026149)	Slc9a8 (MGP_PahariEiJ_G0026148)	B4galt5 (MGP_PahariEiJ_G0026147)	Ptgis (MGP_PahariEiJ_G0026146)	Kcnb1 (MGP_PahariEiJ_G0026145)	MGP_PahariEiJ_G0026144	Znfx1 (MGP_PahariEiJ_G0026143)	Ddx27 (MGP_PahariEiJ_G0026142)	Stau1 (MGP_PahariEiJ_G0026141)	Cse1l (MGP_PahariEiJ_G0026140)	Arfgef2 (MGP_PahariEiJ_G0026139)	Prex1 (MGP_PahariEiJ_G0026138) #20	Sulf2 (MGP_PahariEiJ_G0026137) #22	Ncoa3 (MGP_PahariEiJ_G0026136) #23	MGP_PahariEiJ_G0026135 #24	MGP_PahariEiJ_G0026134	Slc2a10 (MGP_PahariEiJ_G0026133) #26	MGP_PahariEiJ_G0026131 #27	Slc13a3 (MGP_PahariEiJ_G0026130) #28	Ocstamp (MGP_PahariEiJ_G0026129) #29	Zfp334 (MGP_PahariEiJ_G0026128) #30	MGP_PahariEiJ_G0026127 #31	Elmo2 (MGP_PahariEiJ_G0026126) #32	Slc35c2 (MGP_PahariEiJ_G0026125) #33	Cdh22 (MGP_PahariEiJ_G0026124) #34	1700025C18Rik (MGP_PahariEiJ_G0026123) #35	Cd40 (MGP_PahariEiJ_G0026122) #36	Ncoa5 (MGP_PahariEiJ_G0026121) #37