Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.b.a.b ##30	ENSGT00860000135184.f.a	ENSGT00980000198488.m.b.b.b #31	ENSGT00940000165871	ENSGT00940000158668.c #34
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.b.b.b #31	ENSGT00940000165871	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36
Glires	ANCESTRAL SPECIES	5	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.b.b.b #31	ENSGT00940000165871	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000165871	ENSGT00940000158668.c #34	ENSGT00940000162589 #35
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00940000155046 #7	ENSGT00390000015391 #8	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.b.b.b.h #31	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000155046 #7	ENSGT00390000015391 #8	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641
Long-tailed chinchilla	MODERN SPECIES	290	ENSCLAG00000003495 #7	TCF19 (ENSCLAG00000002875) #8	CCHCR1 (ENSCLAG00000002578) #9	PSORS1C2 (ENSCLAG00000002460) #10	CDSN (ENSCLAG00000002225) #11	C6orf15 (ENSCLAG00000004185) #12	SFTA2 (ENSCLAG00000004075) #13	VARS2 (ENSCLAG00000002889) #14	GTF2H4 (ENSCLAG00000007312) #15	DDR1 (ENSCLAG00000007057) #16	IER3 (ENSCLAG00000008607) #17	FLOT1 (ENSCLAG00000007153) #18	TUBB (ENSCLAG00000002694) #19	NRM (ENSCLAG00000002554) #20	PPP1R18 (ENSCLAG00000002490) #21	DHX16 (ENSCLAG00000002398) #22	ENSCLAG00000002264 #23	ENSCLAG00000003429 #24	MRPS18B (ENSCLAG00000003282) #25	PPP1R10 (ENSCLAG00000002371) #26	ABCF1 (ENSCLAG00000003440) #27	PRR3 (ENSCLAG00000003296) #28	GNL1 (ENSCLAG00000012557) #29	ENSCLAG00000017247 #30	ENSCLAG00000011335 #31	RPP21 (ENSCLAG00000010598) #32	TRIM39 (ENSCLAG00000003141) #33	TRIM26 (ENSCLAG00000002373) #34	ENSCLAG00000002056 #35	TRIM10 (ENSCLAG00000004129) #36	TRIM40 (ENSCLAG00000003556) #37
Degu	MODERN SPECIES	46	ENSODEG00000017898 ##30	ENSODEG00000020493	ENSODEG00000017818 #7	TCF19 (ENSODEG00000017899) #8	CCHCR1 (ENSODEG00000017974) #9	PSORS1C2 (ENSODEG00000017925) #10	ENSODEG00000017828 #11	VARS2 (ENSODEG00000017965) #14	GTF2H4 (ENSODEG00000018048) #15	DDR1 (ENSODEG00000017894) #16	ENSODEG00000017909	IER3 (ENSODEG00000017851) #17	FLOT1 (ENSODEG00000017922) #18	NRM (ENSODEG00000017882) #20	ENSODEG00000017855 #21	DHX16 (ENSODEG00000017885) #22	ENSODEG00000017800 #23	ATAT1 (ENSODEG00000017891) #24	ENSODEG00000018070	ENSODEG00000017923 #25	PPP1R10 (ENSODEG00000018020) #26	ABCF1 (ENSODEG00000017985) #27	PRR3 (ENSODEG00000017937) #28	GNL1 (ENSODEG00000018111) #29	ENSODEG00000018047	RPP21 (ENSODEG00000018027) #32	TRIM39 (ENSODEG00000018241) #33	ENSODEG00000017901
Guinea pig	MODERN SPECIES	258											IER3 (ENSCPOG00000037253) #17	FLOT1 (ENSCPOG00000012087) #18	TUBB (ENSCPOG00000035463) #19	NRM (ENSCPOG00000023553) #20	PPP1R18 (ENSCPOG00000033050) #21	DHX16 (ENSCPOG00000015415) #22	C6orf136 (ENSCPOG00000031862) #23	ATAT1 (ENSCPOG00000015407) #24	MRPS18B (ENSCPOG00000015405) #25	PPP1R10 (ENSCPOG00000015402) #26	ABCF1 (ENSCPOG00000021623) #27	PRR3 (ENSCPOG00000040772) #28	GNL1 (ENSCPOG00000001944) #29	ENSCPOG00000030673 #31	ENSCPOG00000001300 ##30
Naked mole-rat female	MODERN SPECIES	30	CCHCR1 (ENSHGLG00000011945) #9	ENSHGLG00000032548 #10	CDSN (ENSHGLG00000050400) #11	ENSHGLG00000047055 #12	ENSHGLG00000040478	SFTA2 (ENSHGLG00000032668) #13	ENSHGLG00000046146	GTF2H4 (ENSHGLG00000013246) #15	ENSHGLG00000043989 #16	IER3 (ENSHGLG00000017142) #17	FLOT1 (ENSHGLG00000017161) #18	ENSHGLG00000017166 #19	ENSHGLG00000040912	ENSHGLG00000017175 #20	PPP1R18 (ENSHGLG00000044913) #21	DHX16 (ENSHGLG00000019290) #22	C6orf136 (ENSHGLG00000043213) #23	ATAT1 (ENSHGLG00000019401) #24	MRPS18B (ENSHGLG00000019371) #25	PPP1R10 (ENSHGLG00000019477) #26	ABCF1 (ENSHGLG00000019209) #27	ENSHGLG00000042777 ##30	ENSHGLG00000017179 #28	GNL1 (ENSHGLG00000017193) #29	ENSHGLG00000049352 ##30	RPP21 (ENSHGLG00000045079) #32	TRIM39 (ENSHGLG00000017217) #33	TRIM26 (ENSHGLG00000036187) #34	TRIM10 (ENSHGLG00000019234) #36	RNF39 (ENSHGLG00000019552)	ENSHGLG00000019201
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000165871	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36
Marmotini	ANCESTRAL SPECIES	89	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804.i #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198967.a	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.a.b.a.b ##30
Marmotini_b	ANCESTRAL SPECIES	156	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804.i #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198967.a	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.a.b.a.b ##30
Squirrel	MODERN SPECIES	437	ENSSTOG00000026103 #7	TCF19 (ENSSTOG00000026988) #8	CCHCR1 (ENSSTOG00000009687) #9	PSORS1C2 (ENSSTOG00000031015) #10	CDSN (ENSSTOG00000024750) #11	SFTA2 (ENSSTOG00000034599) #13	VARS2 (ENSSTOG00000009924) #14	GTF2H4 (ENSSTOG00000023493) #15	DDR1 (ENSSTOG00000009906) #16	IER3 (ENSSTOG00000029253) #17	ENSSTOG00000023492 #19	FLOT1 (ENSSTOG00000002900) #18	MDC1 (ENSSTOG00000021788)	NRM (ENSSTOG00000021137) #20	PPP1R18 (ENSSTOG00000001952) #21	DHX16 (ENSSTOG00000011881) #22	C6orf136 (ENSSTOG00000011877) #23	ATAT1 (ENSSTOG00000011861) #24	MRPS18B (ENSSTOG00000011853) #25	PPP1R10 (ENSSTOG00000011840) #26	ENSSTOG00000015489	PRR3 (ENSSTOG00000011829) #28	GNL1 (ENSSTOG00000011822) #29	ENSSTOG00000034348 #30	ENSSTOG00000019861 ##30	RPP21 (ENSSTOG00000001680) #32	TRIM39 (ENSSTOG00000001671) #33	ENSSTOG00000029737	ENSSTOG00000012265
Arctic ground squirrel	MODERN SPECIES	617	CCHCR1 (ENSUPAG00010003637) #9	PSORS1C2 (ENSUPAG00010003652) #10	CDSN (ENSUPAG00010003663) #11	C6orf15 (ENSUPAG00010003671) #12	ENSUPAG00010003680	SFTA2 (ENSUPAG00010003706) #13	VARS2 (ENSUPAG00010003720) #14	GTF2H4 (ENSUPAG00010003828) #15	DDR1 (ENSUPAG00010003844) #16	IER3 (ENSUPAG00010003893) #17	FLOT1 (ENSUPAG00010003901) #18	TUBB (ENSUPAG00010003937) #19	MDC1 (ENSUPAG00010003950)	NRM (ENSUPAG00010003969) #20	PPP1R18 (ENSUPAG00010003979) #21	DHX16 (ENSUPAG00010003989) #22	C6orf136 (ENSUPAG00010004004) #23	ATAT1 (ENSUPAG00010004021) #24	MRPS18B (ENSUPAG00010004292) #25	PPP1R10 (ENSUPAG00010004318) #26	ENSUPAG00010004329 #7	ABCF1 (ENSUPAG00010004338) #27	ENSUPAG00010004367 #28	GNL1 (ENSUPAG00010004381) #29	ENSUPAG00010004407 #30	ENSUPAG00010004420 ##30	ENSUPAG00010004449	RPP21 (ENSUPAG00010004457) #32	TRIM39 (ENSUPAG00010004469) #33	ENSUPAG00010004488	ENSUPAG00010004513 ##30
Alpin marmot	MODERN SPECIES	139	CCHCR1 (ENSMMMG00000020425) #9	PSORS1C2 (ENSMMMG00000020420) #10	CDSN (ENSMMMG00000020415) #11	C6orf15 (ENSMMMG00000020412) #12	ENSMMMG00000020403	ENSMMMG00000020388	SFTA2 (ENSMMMG00000020383) #13	VARS2 (ENSMMMG00000020357) #14	GTF2H4 (ENSMMMG00000020350) #15	DDR1 (ENSMMMG00000020260) #16	FLOT1 (ENSMMMG00000020224) #18	TUBB (ENSMMMG00000020216) #19	ENSMMMG00000020210	NRM (ENSMMMG00000020195) #20	PPP1R18 (ENSMMMG00000020177) #21	DHX16 (ENSMMMG00000020166) #22	C6orf136 (ENSMMMG00000020161) #23	ATAT1 (ENSMMMG00000020117) #24	MRPS18B (ENSMMMG00000020106) #25	PPP1R10 (ENSMMMG00000020078) #26	ENSMMMG00000020050 #27	ENSMMMG00000020039 #28	GNL1 (ENSMMMG00000020032) #29	ENSMMMG00000020028 #30	ENSMMMG00000020021 ##30	ENSMMMG00000020011	RPP21 (ENSMMMG00000020010) #32	TRIM39 (ENSMMMG00000019999) #33	ENSMMMG00000019992	ENSMMMG00000019657 ##30	ENSMMMG00000015548 ##30
Eurasian red squirrel	MODERN SPECIES	16	PSORS1C2 (ENSSVLG00005005438) #10	CDSN (ENSSVLG00005005459) #11	C6orf15 (ENSSVLG00005005479) #12	ENSSVLG00005005513	SFTA2 (ENSSVLG00005005574) #13	VARS2 (ENSSVLG00005005632) #14	GTF2H4 (ENSSVLG00005005995) #15	DDR1 (ENSSVLG00005006113) #16	IER3 (ENSSVLG00005006296) #17	FLOT1 (ENSSVLG00005006317) #18	TUBB (ENSSVLG00005006345) #19	ENSSVLG00005006400	MDC1 (ENSSVLG00005006421)	NRM (ENSSVLG00005006440) #20	PPP1R18 (ENSSVLG00005006474) #21	DHX16 (ENSSVLG00005006508) #22	C6orf136 (ENSSVLG00005006546) #23	ENSSVLG00005006632 #24	MRPS18B (ENSSVLG00005006707) #25	ENSSVLG00005006766 #26	ENSSVLG00005006881 #24	ENSSVLG00005006920 #26	ENSSVLG00005007053 #27	PRR3 (ENSSVLG00005007256) #28	GNL1 (ENSSVLG00005007300) #29	ENSSVLG00005007351 #30	ENSSVLG00005007384 ##30	ENSSVLG00005007438	RPP21 (ENSSVLG00005007456) #32	TRIM39 (ENSSVLG00005007480) #33	ENSSVLG00005007512
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.b.b.b #31	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Muroidea	ANCESTRAL SPECIES	15	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b ##30	ENSGT00940000158668.c #34
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a.a ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.a.b ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.b ##30
Cricetinae	ANCESTRAL SPECIES	55	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a.a ##30
Golden Hamster	MODERN SPECIES	897	Cchcr1 (ENSMAUG00000005092) #9	Psors1c2 (ENSMAUG00000012127) #10	Cdsn (ENSMAUG00000006784) #11	2300002M23Rik (ENSMAUG00000020498) #12	Mucl3 (ENSMAUG00000019804)	ENSMAUG00000020430 #13	ENSMAUG00000002749	Vars2 (ENSMAUG00000018946) #14	Gtf2h4 (ENSMAUG00000021324) #15	Ddr1 (ENSMAUG00000020474) #16	Ier3 (ENSMAUG00000019002) #17	Flot1 (ENSMAUG00000015116) #18	Tubb5 (ENSMAUG00000020031) #19	Nrm (ENSMAUG00000014250) #20	Ppp1r18 (ENSMAUG00000007610) #21	Dhx16 (ENSMAUG00000001696) #22	2310061I04Rik (ENSMAUG00000010686) #23	Atat1 (ENSMAUG00000014788) #24	Mrps18b (ENSMAUG00000019160) #25	Ppp1r10 (ENSMAUG00000010075) #26	Abcf1 (ENSMAUG00000012315) #27	Prr3 (ENSMAUG00000012487) #28	Gnl1 (ENSMAUG00000015596) #29	H2-T24 (ENSMAUG00000007959) #30	ENSMAUG00000019177 ##30	ENSMAUG00000016894 ##30	ENSMAUG00000010143 ##30	ENSMAUG00000009998 ##30
Chinese hamster chok1gshd	MODERN SPECIES	303									ENSCGRG00001019304	Ier3 (ENSCGRG00001019584) #17	Flot1 (ENSCGRG00001020696) #18	TUBB5 (ENSCGRG00001023930) #19	Mdc1 (ENSCGRG00001000352)	Nrm (ENSCGRG00001001144) #20	Ppp1r18 (ENSCGRG00001003993) #21	Dhx16 (ENSCGRG00001008329) #22	2310061I04Rik (ENSCGRG00001011201) #23	ATAT1 (ENSCGRG00001013997) #24	Mrps18b (ENSCGRG00001018086) #25	Ppp1r10 (ENSCGRG00001020281) #26	Abcf1 (ENSCGRG00001018274) #27	Prr3 (ENSCGRG00001000806) #28	Gnl1 (ENSCGRG00001004986) #29	ENSCGRG00001011540 #31	ENSCGRG00001012121 ##30	ENSCGRG00001018149 ##30	ENSCGRG00001013282 ##30	ENSCGRG00001018024 ##30	ENSCGRG00001020054 ##30	ENSCGRG00001001839	ENSCGRG00001000045
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a.a ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.a.b ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.b ##30
Northern American deer mouse	MODERN SPECIES	13	Cchcr1 (ENSPEMG00000018707) #9	Psors1c2 (ENSPEMG00000003162) #10	Cdsn (ENSPEMG00000007509) #11	2300002M23Rik (ENSPEMG00000012606) #12	Mucl3 (ENSPEMG00000012298)	ENSPEMG00000027689 #13	Vars2 (ENSPEMG00000014691) #14	Gtf2h4 (ENSPEMG00000000516) #15	Ddr1 (ENSPEMG00000018311) #16	Ier3 (ENSPEMG00000030288) #17	Flot1 (ENSPEMG00000012347) #18	Tubb5 (ENSPEMG00000025556) #19	Mdc1 (ENSPEMG00000001006)	Nrm (ENSPEMG00000025756) #20	Ppp1r18 (ENSPEMG00000008593) #21	Dhx16 (ENSPEMG00000017508) #22	2310061I04Rik (ENSPEMG00000016402) #23	Atat1 (ENSPEMG00000008803) #24	Mrps18b (ENSPEMG00000001695) #25	Ppp1r10 (ENSPEMG00000015950) #26	Abcf1 (ENSPEMG00000006699) #27	Prr3 (ENSPEMG00000001275) #28	Gnl1 (ENSPEMG00000002731) #29	H2-T24 (ENSPEMG00000017205) #30	ENSPEMG00000015795 ##30	ENSPEMG00000026587 ##30	ENSPEMG00000027766 ##30	ENSPEMG00000027418 ##30	ENSPEMG00000027893 ##30	ENSPEMG00000013450 ##30	ENSPEMG00000026872 ##30
Prairie vole	MODERN SPECIES	170	Cchcr1 (ENSMOCG00000017074) #9	Psors1c2 (ENSMOCG00000001853) #10	Cdsn (ENSMOCG00000014299) #11	2300002M23Rik (ENSMOCG00000018247) #12	Mucl3 (ENSMOCG00000017510)	ENSMOCG00000000898 #13	Vars2 (ENSMOCG00000014607) #14	Gtf2h4 (ENSMOCG00000014694) #15	Ddr1 (ENSMOCG00000022533) #16	Ier3 (ENSMOCG00000007903) #17	Flot1 (ENSMOCG00000017046) #18	ENSMOCG00000011823 #19	Mdc1 (ENSMOCG00000021668)	Nrm (ENSMOCG00000014053) #20	Ppp1r18 (ENSMOCG00000001708) #21	Dhx16 (ENSMOCG00000010715) #22	2310061I04Rik (ENSMOCG00000008588) #23	Atat1 (ENSMOCG00000008333) #24	Mrps18b (ENSMOCG00000013273) #25	Ppp1r10 (ENSMOCG00000008183) #26	Abcf1 (ENSMOCG00000010869) #27	Prr3 (ENSMOCG00000014183) #28	Gnl1 (ENSMOCG00000020934) #29	H2-T24 (ENSMOCG00000012918) #30	ENSMOCG00000013347 ##30	ENSMOCG00000015832 ##30	ENSMOCG00000002230 ##30	ENSMOCG00000003004	ENSMOCG00000019167 ##30	ENSMOCG00000000982 ##30	ENSMOCG00000000291 ##30
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.b ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.a.a.a ##30	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##30
Mus	ANCESTRAL SPECIES	16	ENSGT00940000153251.b.a #9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.b ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.a.a.a ##30	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.d ##30
Mus_A	ANCESTRAL SPECIES	10	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT01060000250161	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.b ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.a.a.d ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.d ##30
Mus_B	ANCESTRAL SPECIES	9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT01060000250161	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00980000198488.m.a.b.a.a.a ##30	ENSGT00980000198488.m.a.b.a.b.a.b.a.b ##30	ENSGT00980000198488.m.a.b.a.b.a.a.a.d ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.d ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.c.a.b ##30
Mus_C	ANCESTRAL SPECIES	9	ENSGT00390000013322 #10	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT01060000250161	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.b.a.b.b #30	ENSGT00950000183454	ENSGT00980000198488.m.a.b.a.b.a.b.a.a.a.a.a ##30	ENSGT00980000198488.m.b.b.b.e.a.a.a #31	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.d ##30	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.c.a.b ##30
Steppe mouse	MODERN SPECIES	2534	Cchcr1 (ENSMSIG00000014563) #9	Psors1c2 (ENSMSIG00000014702) #10	ENSMSIG00000014711 #11	2300002M23Rik (ENSMSIG00000014715) #12	Mucl3 (ENSMSIG00000014724)	ENSMSIG00000014734 #13	Vars2 (ENSMSIG00000014747) #14	Gtf2h4 (ENSMSIG00000014824) #15	Ddr1 (ENSMSIG00000014850) #16	Ier3 (ENSMSIG00000015093) #17	Flot1 (ENSMSIG00000015097) #18	Tubb5 (ENSMSIG00000015128) #19	Mdc1 (ENSMSIG00000015149)	Nrm (ENSMSIG00000015175) #20	Ppp1r18 (ENSMSIG00000015193) #21	Dhx16 (ENSMSIG00000015214) #22	2310061I04Rik (ENSMSIG00000015238) #23	Atat1 (ENSMSIG00000015273) #24	Mrps18b (ENSMSIG00000015342) #25	ENSMSIG00000015394 #26	ENSMSIG00000015607	Abcf1 (ENSMSIG00000015615) #27
spretus	MODERN SPECIES	8	Psors1c2 (MGP_SPRETEiJ_G0022430) #10	Cdsn (MGP_SPRETEiJ_G0022431) #11	2300002M23Rik (MGP_SPRETEiJ_G0022432) #12	MGP_SPRETEiJ_G0022433 #13	MGP_SPRETEiJ_G0022434	Mucl3 (MGP_SPRETEiJ_G0022435)	Vars2 (MGP_SPRETEiJ_G0022436) #14	Gtf2h4 (MGP_SPRETEiJ_G0022437) #15	Ddr1 (MGP_SPRETEiJ_G0022438) #16	Ier3 (MGP_SPRETEiJ_G0022439) #17	Flot1 (MGP_SPRETEiJ_G0022440) #18	Tubb5 (MGP_SPRETEiJ_G0022441) #19	Mdc1 (MGP_SPRETEiJ_G0022442)	Nrm (MGP_SPRETEiJ_G0022443) #20	Ppp1r18 (MGP_SPRETEiJ_G0022444) #21	Dhx16 (MGP_SPRETEiJ_G0022445) #22	2310061I04Rik (MGP_SPRETEiJ_G0022446) #23	Atat1 (MGP_SPRETEiJ_G0022447) #24	Mrps18b (MGP_SPRETEiJ_G0022448) #25	Ppp1r10 (MGP_SPRETEiJ_G0022449) #26	Abcf1 (MGP_SPRETEiJ_G0022450) #27	Prr3 (MGP_SPRETEiJ_G0022451) #28	Gnl1 (MGP_SPRETEiJ_G0022452) #29	H2-T24 (MGP_SPRETEiJ_G0022453) #30	MGP_SPRETEiJ_G0022455	MGP_SPRETEiJ_G0022456	MGP_SPRETEiJ_G0022457 ##30	Rpp21 (MGP_SPRETEiJ_G0022458) #32	Trim39 (MGP_SPRETEiJ_G0022459) #33	MGP_SPRETEiJ_G0022460	MGP_SPRETEiJ_G0022461
Mouse	MODERN SPECIES	8	Psors1c2 (ENSMUSG00000024409) #10	Cdsn (ENSMUSG00000039518) #11	2300002M23Rik (ENSMUSG00000039269) #12	Sfta2 (ENSMUSG00000090509)	Muc21 (ENSMUSG00000090588)	Mucl3 (ENSMUSG00000073408)	Vars2 (ENSMUSG00000038838) #14	Gtf2h4 (ENSMUSG00000001524) #15	Ddr1 (ENSMUSG00000003534) #16	Ier3 (ENSMUSG00000003541) #17	Flot1 (ENSMUSG00000059714) #18	Tubb5 (ENSMUSG00000001525) #19	Mdc1 (ENSMUSG00000061607)	Nrm (ENSMUSG00000059791) #20	Ppp1r18 (ENSMUSG00000034595) #21	Dhx16 (ENSMUSG00000024422) #22	2310061I04Rik (ENSMUSG00000050705) #23	Atat1 (ENSMUSG00000024426) #24	Mrps18b (ENSMUSG00000024436) #25	Ppp1r10 (ENSMUSG00000039220) #26	Abcf1 (ENSMUSG00000038762) #27	Prr3 (ENSMUSG00000038500) #28	Gnl1 (ENSMUSG00000024429) #29	H2-T24 (ENSMUSG00000053835) #30	H2-T23 (ENSMUSG00000067212) ##30	H2-T22 (ENSMUSG00000056116) ##30	Gm11127 (ENSMUSG00000079492) ##30	H2-Bl (ENSMUSG00000073406) #31	Gm7030 (ENSMUSG00000092243) ##30	H2-T10 (ENSMUSG00000079491) ##30	Gm19684 (ENSMUSG00000092277)
Ryukyu mouse	MODERN SPECIES	8	Psors1c2 (MGP_CAROLIEiJ_G0021523) #10	Cdsn (MGP_CAROLIEiJ_G0021524) #11	2300002M23Rik (MGP_CAROLIEiJ_G0021525) #12	MGP_CAROLIEiJ_G0021526 #13	MGP_CAROLIEiJ_G0021527	Mucl3 (MGP_CAROLIEiJ_G0021528)	Vars2 (MGP_CAROLIEiJ_G0021529) #14	Gtf2h4 (MGP_CAROLIEiJ_G0021530) #15	Ddr1 (MGP_CAROLIEiJ_G0021531) #16	Ier3 (MGP_CAROLIEiJ_G0021532) #17	Flot1 (MGP_CAROLIEiJ_G0021533) #18	Tubb5 (MGP_CAROLIEiJ_G0021534) #19	Mdc1 (MGP_CAROLIEiJ_G0021535)	Nrm (MGP_CAROLIEiJ_G0021536) #20	Ppp1r18 (MGP_CAROLIEiJ_G0021537) #21	Dhx16 (MGP_CAROLIEiJ_G0021538) #22	2310061I04Rik (MGP_CAROLIEiJ_G0021539) #23	Atat1 (MGP_CAROLIEiJ_G0021540) #24	Mrps18b (MGP_CAROLIEiJ_G0021541) #25	Ppp1r10 (MGP_CAROLIEiJ_G0021542) #26	MGP_CAROLIEiJ_G0021543 ##30	MGP_CAROLIEiJ_G0021544	Abcf1 (MGP_CAROLIEiJ_G0021545) #27	Prr3 (MGP_CAROLIEiJ_G0021546) #28	Gnl1 (MGP_CAROLIEiJ_G0021547) #29	H2-T24 (MGP_CAROLIEiJ_G0021548) #30	Rpp21 (MGP_CAROLIEiJ_G0021549) #32	Trim39 (MGP_CAROLIEiJ_G0021550) #33	H2-M10.4 (MGP_CAROLIEiJ_G0021551) ##30	H2-M11 (MGP_CAROLIEiJ_G0021552) ##30	Trim26 (MGP_CAROLIEiJ_G0021553) #34
Shrew mouse	MODERN SPECIES	9	Cchcr1 (MGP_PahariEiJ_G0020516) #9	Psors1c2 (MGP_PahariEiJ_G0020517) #10	Cdsn (MGP_PahariEiJ_G0020518) #11	2300002M23Rik (MGP_PahariEiJ_G0020519) #12	MGP_PahariEiJ_G0020520 #13	Mucl3 (MGP_PahariEiJ_G0020522)	Vars2 (MGP_PahariEiJ_G0020523) #14	Gtf2h4 (MGP_PahariEiJ_G0020524) #15	Ddr1 (MGP_PahariEiJ_G0020525) #16	Ier3 (MGP_PahariEiJ_G0020526) #17	Flot1 (MGP_PahariEiJ_G0020527) #18	Tubb5 (MGP_PahariEiJ_G0020528) #19	Mdc1 (MGP_PahariEiJ_G0020529)	Nrm (MGP_PahariEiJ_G0020530) #20	Ppp1r18 (MGP_PahariEiJ_G0020531) #21	Dhx16 (MGP_PahariEiJ_G0020532) #22	2310061I04Rik (MGP_PahariEiJ_G0020533) #23	Atat1 (MGP_PahariEiJ_G0020534) #24	Mrps18b (MGP_PahariEiJ_G0020535) #25	Ppp1r10 (MGP_PahariEiJ_G0020536) #26	Abcf1 (MGP_PahariEiJ_G0020537) #27	Prr3 (MGP_PahariEiJ_G0020538) #28	Gnl1 (MGP_PahariEiJ_G0020539) #29	H2-T24 (MGP_PahariEiJ_G0020540) #30	MGP_PahariEiJ_G0020541 ##30	MGP_PahariEiJ_G0020542 ##30	MGP_PahariEiJ_G0020543	MGP_PahariEiJ_G0020544	MGP_PahariEiJ_G0020545 ##30	Rpp21 (MGP_PahariEiJ_G0020546) #32	Trim39 (MGP_PahariEiJ_G0020547) #33
Rat	MODERN SPECIES	12	Pou5f1 (ENSRNOG00000046487) #7	Tcf19 (ENSRNOG00000058288) #8	Cchcr1 (ENSRNOG00000050233) #9	Psors1c2 (ENSRNOG00000048579) #10	Cdsn (ENSRNOG00000050215) #11	RGD1562885 (ENSRNOG00000030676) #12	Mucl3 (ENSRNOG00000042287)	Sfta2 (ENSRNOG00000048987)	ENSRNOG00000070102	Ddr1 (ENSRNOG00000057125) #16	Ier3 (ENSRNOG00000000827) #17	Flot1 (ENSRNOG00000000826) #18	Tubb5 (ENSRNOG00000061216) #19	Mdc1 (ENSRNOG00000032813)	Ppp1r18 (ENSRNOG00000000818) #21	Dhx16 (ENSRNOG00000030157) #22	Atat1 (ENSRNOG00000000809) #24	Mrps18b (ENSRNOG00000000804) #25	Ppp1r10 (ENSRNOG00000059268) #26	Abcf1 (ENSRNOG00000000799) #27	Prr3 (ENSRNOG00000025806) #28	Gnl1 (ENSRNOG00000000798) #29	RT1-T24-3 (ENSRNOG00000032596) #30	ENSRNOG00000065219	RT1-T24-4 (ENSRNOG00000042905) #30	RT1-S3 (ENSRNOG00000000777) ##30	RT1-N3 (ENSRNOG00000000795) ##30	RT1-O1 (ENSRNOG00000029001) ##30	RT1-S2 (ENSRNOG00000032664) ##30	RT1-N2 (ENSRNOG00000029386) ##30	AABR07044362.1 (ENSRNOG00000026051) ##30
Upper Galilee mountains blind mole rat	MODERN SPECIES	1132										Ier3 (ENSNGAG00000005057) #17	Flot1 (ENSNGAG00000010490) #18	ENSNGAG00000007297 #19	Mdc1 (ENSNGAG00000005054)	Nrm (ENSNGAG00000002805) #20	Ppp1r18 (ENSNGAG00000002879) #21	Dhx16 (ENSNGAG00000001106) #22	2310061I04Rik (ENSNGAG00000016243) #23	Atat1 (ENSNGAG00000015326) #24	Mrps18b (ENSNGAG00000017874) #25	Ppp1r10 (ENSNGAG00000007237) #26	ENSNGAG00000011984	Prr3 (ENSNGAG00000004281) #28	Gnl1 (ENSNGAG00000000745) #29	H2-T24 (ENSNGAG00000000497) #30
Lesser Egyptian jerboa	MODERN SPECIES	220	ENSJJAG00000000376	ENSJJAG00000002508	Nfkbil1 (ENSJJAG00000003324)	Atp6v1g2 (ENSJJAG00000004269)	Ddx39b (ENSJJAG00000005660)	Pou5f1 (ENSJJAG00000007532) #7	Tcf19 (ENSJJAG00000009938) #8	Psors1c2 (ENSJJAG00000010597) #10	Vars2 (ENSJJAG00000011144) #14	Gtf2h4 (ENSJJAG00000014159) #15	Ddr1 (ENSJJAG00000015037) #16	Flot1 (ENSJJAG00000016450) #18	Tubb5 (ENSJJAG00000024145) #19	Nrm (ENSJJAG00000024167) #20	Ppp1r18 (ENSJJAG00000024185) #21	Dhx16 (ENSJJAG00000000186) #22	ENSJJAG00000000398 #23	Atat1 (ENSJJAG00000000728) #24	Mrps18b (ENSJJAG00000003794) #25	Ppp1r10 (ENSJJAG00000006676) #26	ENSJJAG00000010508 #27	Prr3 (ENSJJAG00000010607) #28	Gnl1 (ENSJJAG00000010831) #29	Rpp21 (ENSJJAG00000011176) #32	Trim39 (ENSJJAG00000020240) #33	Trim26 (ENSJJAG00000020786) #34	Trim10 (ENSJJAG00000000052) #36	ENSJJAG00000000537	Rnf39 (ENSJJAG00000001427)	Mog (ENSJJAG00000002510)	Gabbr1 (ENSJJAG00000010670)
Kangaroo rat	MODERN SPECIES	457	ENSDORG00000019756 ##30	Pou5f1 (ENSDORG00000009549) #7	Tcf19 (ENSDORG00000030240) #8	Cchcr1 (ENSDORG00000009546) #9	Psors1c2 (ENSDORG00000028350) #10	Cdsn (ENSDORG00000025244) #11	ENSDORG00000023286 #13	ENSDORG00000027344 #15	Vars2 (ENSDORG00000008516) #14	Ddr1 (ENSDORG00000008512) #16	Ier3 (ENSDORG00000023897) #17	Tubb5 (ENSDORG00000029828) #19	Mdc1 (ENSDORG00000003207)	Nrm (ENSDORG00000027900) #20	ENSDORG00000003205 #21	Dhx16 (ENSDORG00000003203) #22	2310061I04Rik (ENSDORG00000003202) #23	Atat1 (ENSDORG00000003201) #24	Mrps18b (ENSDORG00000003199) #25	Ppp1r10 (ENSDORG00000003198) #26	Abcf1 (ENSDORG00000003195) #27	Prr3 (ENSDORG00000027875) #28	ENSDORG00000015458 #31	ENSDORG00000027945	Rpp21 (ENSDORG00000000655) #32	Trim39 (ENSDORG00000000653) #33	Trim26 (ENSDORG00000014023) #34	Trim15 (ENSDORG00000014021) #35	Trim10 (ENSDORG00000014020) #36	Trim40 (ENSDORG00000014019) #37	Trim31 (ENSDORG00000014016)
Lagomorpha	ANCESTRAL SPECIES	71				ENSGT00940000164479	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370 #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554.c #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000165871	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000163585
Rabbit	MODERN SPECIES	3	ENSOCUG00000030453	ENSOCUG00000029731	HLA-DRA (ENSOCUG00000009103)	ENSOCUG00000025822	ENSOCUG00000006769	ENSOCUG00000021762	SFTA2 (ENSOCUG00000035950) #13	GTF2H4 (ENSOCUG00000021496) #15	DDR1 (ENSOCUG00000016487) #16	IER3 (ENSOCUG00000016451) #17	FLOT1 (ENSOCUG00000017308) #18	TUBB (ENSOCUG00000002187) #19	ENSOCUG00000002181	NRM (ENSOCUG00000002178) #20	ENSOCUG00000002172 #21	DHX16 (ENSOCUG00000002163) #22	C6orf136 (ENSOCUG00000002160) #23	ATAT1 (ENSOCUG00000002153) #24	ENSOCUG00000002149 #25	PPP1R10 (ENSOCUG00000002132) #26	ABCF1 (ENSOCUG00000002121) #27	PRR3 (ENSOCUG00000002117) #28	GNL1 (ENSOCUG00000002110) #29	TRIM39 (ENSOCUG00000014141) #33	ENSOCUG00000006557 ##30	ENSOCUG00000010984 ##30	ENSOCUG00000008993 ##30	ENSOCUG00000023505	TRIM26 (ENSOCUG00000015700) #34	TRIM15 (ENSOCUG00000015687) #35	TRIM10 (ENSOCUG00000015679) #36
Pika	MODERN SPECIES	9749													ENSOPRG00000001938	NRM (ENSOPRG00000001920) #20	PPP1R18 (ENSOPRG00000001905) #21	DHX16 (ENSOPRG00000001864) #22	C6orf136 (ENSOPRG00000001855) #23
Tree shrew	MODERN SPECIES	5203														MDC1 (ENSTBEG00000016214)	NRM (ENSTBEG00000016072) #20	DHX16 (ENSTBEG00000015719) #22	C6orf136 (ENSTBEG00000015587) #23	ENSTBEG00000015329 #24
Primates	ANCESTRAL SPECIES	5	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.b.b.b #31	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00860000135184.f.a	ENSGT00980000198488.m.a.a.a.a ##30	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00980000198488.m.a.b.b ##30	ENSGT00860000135184.f.b
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.a.a.a.a.k.b.a.b.a.b ##30	ENSGT00860000135184.f.a	ENSGT00980000198488.m.a.a.a.a.k.b.b.b.b ##30	ENSGT01010000223167	ENSGT00980000198488.m.a.a.a.a.k.a ##30
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.a.a.a.a.k.a.d.b ##30	ENSGT00980000198488.m.b.b.b #31	ENSGT00980000198488.m.a.a.a.a.k.a.c ##30	ENSGT00940000158668.c #34
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000163585
Hominidae	ANCESTRAL SPECIES	5	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000163585
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Gorilla	MODERN SPECIES	19	CDSN (ENSGGOG00000026808) #11	C6orf15 (ENSGGOG00000014567) #12	ENSGGOG00000041787	ENSGGOG00000040711	MUC21 (ENSGGOG00000006846)	ENSGGOG00000005839	SFTA2 (ENSGGOG00000014605) #13	VARS2 (ENSGGOG00000014587) #14	GTF2H4 (ENSGGOG00000014239) #15	DDR1 (ENSGGOG00000014719) #16	FLOT1 (ENSGGOG00000002311) #18	TUBB (ENSGGOG00000022655) #19	MDC1 (ENSGGOG00000000729)	NRM (ENSGGOG00000000728) #20	PPP1R18 (ENSGGOG00000000726) #21	DHX16 (ENSGGOG00000022943) #22	C6orf136 (ENSGGOG00000011334) #23	ATAT1 (ENSGGOG00000011323) #24	MRPS18B (ENSGGOG00000011317) #25	PPP1R10 (ENSGGOG00000011307) #26	ABCF1 (ENSGGOG00000000968) #27	ENSGGOG00000014604 #28	GNL1 (ENSGGOG00000014590) #29	HLA-E (ENSGGOG00000012802) ##30	ENSGGOG00000022853	TRIM39 (ENSGGOG00000016403) #33	ENSGGOG00000039509	TRIM26 (ENSGGOG00000008371) #34	TRIM15 (ENSGGOG00000016379) #35	TRIM10 (ENSGGOG00000016366) #36	TRIM40 (ENSGGOG00000004900) #37
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Pan	ANCESTRAL SPECIES	5	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000163585
Chimpanzee	MODERN SPECIES	19	CDSN (ENSPTRG00000049242) #11	C6H6orf15 (ENSPTRG00000017947) #12	HCG22 (ENSPTRG00000047959)	MUC22 (ENSPTRG00000044063)	ENSPTRG00000029765	MUCL3 (ENSPTRG00000029766)	SFTA2 (ENSPTRG00000023665) #13	VARS2 (ENSPTRG00000034497) #14	GTF2H4 (ENSPTRG00000017943) #15	DDR1 (ENSPTRG00000017942) #16	FLOT1 (ENSPTRG00000017940) #18	TUBB (ENSPTRG00000017675) #19	MDC1 (ENSPTRG00000017938)	NRM (ENSPTRG00000017937) #20	PPP1R18 (ENSPTRG00000017936) #21	DHX16 (ENSPTRG00000017935) #22	C6H6orf136 (ENSPTRG00000017934) #23	ATAT1 (ENSPTRG00000017933) #24	MRPS18B (ENSPTRG00000017932) #25	PPP1R10 (ENSPTRG00000017931) #26	ABCF1 (ENSPTRG00000017930) #27	PRR3 (ENSPTRG00000043143) #28	GNL1 (ENSPTRG00000017928) #29	PATR-E (ENSPTRG00000038986) ##30	ENSPTRG00000050335	TRIM39 (ENSPTRG00000017923) #33	ENSPTRG00000050034	TRIM26 (ENSPTRG00000024332) #34	TRIM15 (ENSPTRG00000017920) #35	TRIM10 (ENSPTRG00000017919) #36	TRIM40 (ENSPTRG00000017918) #37
Bonobo	MODERN SPECIES	19	PSORS1C1 (ENSPPAG00000043353)	C6orf15 (ENSPPAG00000034584) #12	ENSPPAG00000030679	ENSPPAG00000034516	ENSPPAG00000033294	ENSPPAG00000039149	SFTA2 (ENSPPAG00000032516) #13	VARS2 (ENSPPAG00000041141) #14	GTF2H4 (ENSPPAG00000039926) #15	DDR1 (ENSPPAG00000026163) #16	FLOT1 (ENSPPAG00000031390) #18	ENSPPAG00000017220 #19	MDC1 (ENSPPAG00000039387)	NRM (ENSPPAG00000040799) #20	PPP1R18 (ENSPPAG00000035016) #21	DHX16 (ENSPPAG00000025169) #22	C6orf136 (ENSPPAG00000031612) #23	ATAT1 (ENSPPAG00000030666) #24	ENSPPAG00000039692 #25	PPP1R10 (ENSPPAG00000038737) #26	ABCF1 (ENSPPAG00000036348) #27	ENSPPAG00000043578 #28	GNL1 (ENSPPAG00000044009) #29	HLA-E (ENSPPAG00000038211) ##30	TRIM39 (ENSPPAG00000040674) #33	TRIM26 (ENSPPAG00000029319) #34	TRIM15 (ENSPPAG00000039927) #35	TRIM10 (ENSPPAG00000013025) #36	TRIM40 (ENSPPAG00000032657) #37	TRIM31 (ENSPPAG00000042134)	ENSPPAG00000041758
Human	MODERN SPECIES	18	C6orf15 (ENSG00000204542) #12	HCG22 (ENSG00000228789)	MUC22 (ENSG00000261272)	MUC21 (ENSG00000204544)	MUCL3 (ENSG00000168631)	SFTA2 (ENSG00000196260) #13	VARS2 (ENSG00000137411) #14	GTF2H4 (ENSG00000213780) #15	DDR1 (ENSG00000204580) #16	IER3 (ENSG00000137331) #17	FLOT1 (ENSG00000137312) #18	TUBB (ENSG00000196230) #19	MDC1 (ENSG00000137337)	NRM (ENSG00000137404) #20	PPP1R18 (ENSG00000146112) #21	DHX16 (ENSG00000204560) #22	C6orf136 (ENSG00000204564) #23	ATAT1 (ENSG00000137343) #24	MRPS18B (ENSG00000204568) #25	PPP1R10 (ENSG00000204569) #26	ABCF1 (ENSG00000204574) #27	PRR3 (ENSG00000204576) #28	GNL1 (ENSG00000204590) #29	HLA-E (ENSG00000204592) ##30	RPP21 (ENSG00000241370) #32	TRIM39-RPP21 (ENSG00000248167)	TRIM39 (ENSG00000204599) #33	TRIM26 (ENSG00000234127) #34	TRIM15 (ENSG00000204610) #35	TRIM10 (ENSG00000204613) #36	TRIM40 (ENSG00000204614) #37
Orangutan	MODERN SPECIES	19	C6orf15 (ENSPPYG00000017204) #12	HCG22 (ENSPPYG00000035611)	ENSPPYG00000033977	ENSPPYG00000038713	ENSPPYG00000035115	SFTA2 (ENSPPYG00000016425) #13	VARS2 (ENSPPYG00000016424) #14	GTF2H4 (ENSPPYG00000016423) #15	DDR1 (ENSPPYG00000016422) #16	IER3 (ENSPPYG00000030008) #17	FLOT1 (ENSPPYG00000016420) #18	TUBB (ENSPPYG00000016419) #19	MDC1 (ENSPPYG00000016418)	NRM (ENSPPYG00000016417) #20	PPP1R18 (ENSPPYG00000016416) #21	DHX16 (ENSPPYG00000016415) #22	ATAT1 (ENSPPYG00000016413) #23	ENSPPYG00000016412 #25	PPP1R10 (ENSPPYG00000016411) #26	ABCF1 (ENSPPYG00000016410) #27	PRR3 (ENSPPYG00000016409) #28	GNL1 (ENSPPYG00000016408) #29	HLA-E (ENSPPYG00000017252) ##30	RPP21 (ENSPPYG00000031544) #32	TRIM39 (ENSPPYG00000016404) #33	TRIM26 (ENSPPYG00000017203) #34	TRIM15 (ENSPPYG00000017202) #35	TRIM10 (ENSPPYG00000017201) #36	TRIM40 (ENSPPYG00000017200) #37	TRIM31 (ENSPPYG00000017199)	RNF39 (ENSPPYG00000017198)
Gibbon	MODERN SPECIES	10	C6orf15 (ENSNLEG00000005697) #12	HCG22 (ENSNLEG00000034621)	ENSNLEG00000034026	ENSNLEG00000005696	ENSNLEG00000032283	ENSNLEG00000005685 #13	VARS2 (ENSNLEG00000005625) #14	GTF2H4 (ENSNLEG00000005583) #15	DDR1 (ENSNLEG00000005485) #16	IER3 (ENSNLEG00000005480) #17	FLOT1 (ENSNLEG00000005446) #18	TUBB (ENSNLEG00000005348) #19	MDC1 (ENSNLEG00000005339)	NRM (ENSNLEG00000005328) #20	PPP1R18 (ENSNLEG00000005322) #21	DHX16 (ENSNLEG00000005270) #22	ENSNLEG00000005264 #23	ATAT1 (ENSNLEG00000005232) #24	MRPS18B (ENSNLEG00000005224) #25	PPP1R10 (ENSNLEG00000005196) #26	ABCF1 (ENSNLEG00000005108) #27	ENSNLEG00000029816 #28	GNL1 (ENSNLEG00000005058) #29	ENSNLEG00000005053 ##30	ENSNLEG00000028109	TRIM39 (ENSNLEG00000005026) #33	ENSNLEG00000030184	ENSNLEG00000005023 ##30	TRIM26 (ENSNLEG00000005001) #34	TRIM15 (ENSNLEG00000004987) #35	TRIM10 (ENSNLEG00000004975) #36
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.b.a.b ##30	ENSGT00940000162213.g	ENSGT00940000158668.c #34	ENSGT00940000162589 #35
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.b.a.b ##30	ENSGT00940000162213.g	ENSGT00860000135184.f.a	ENSGT00980000198488.m.a.a.a.a.k.b.b.b.b.b ##30
Vervet Monkey	MODERN SPECIES	8	PSORS1C2 (ENSCSAG00000008388) #10	CDSN (ENSCSAG00000008379) #11	C6orf15 (ENSCSAG00000008374) #12	MUC22 (ENSCSAG00000008367)	MUC21 (ENSCSAG00000008337)	SFTA2 (ENSCSAG00000008333) #13	VARS2 (ENSCSAG00000008327) #14	GTF2H4 (ENSCSAG00000008313) #15	DDR1 (ENSCSAG00000008301) #16	IER3 (ENSCSAG00000008293) #17	FLOT1 (ENSCSAG00000008289) #18	TUBB (ENSCSAG00000008279) #19	MDC1 (ENSCSAG00000008273)	NRM (ENSCSAG00000008266) #20	PPP1R18 (ENSCSAG00000008261) #21	DHX16 (ENSCSAG00000008258) #22	C6orf136 (ENSCSAG00000008243) #23	ATAT1 (ENSCSAG00000008236) #24	PPP1R10 (ENSCSAG00000008228) #26	ABCF1 (ENSCSAG00000008215) #27	PRR3 (ENSCSAG00000008206) #28	GNL1 (ENSCSAG00000008202) #29	ENSCSAG00000008172 ##30	ENSCSAG00000008166 ##30	RPP21 (ENSCSAG00000008160) #32	TRIM39 (ENSCSAG00000008158) #33	TRIM26 (ENSCSAG00000008151) #34	TRIM15 (ENSCSAG00000008133) #35	TRIM10 (ENSCSAG00000008129) #36	TRIM40 (ENSCSAG00000008122) #37	ENSCSAG00000008116
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b.b ##30	ENSGT00900000141074.e.a.a.a.a	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.b.a.b ##30	ENSGT00940000162213.g	ENSGT00940000158668.c #34
Macaca	ANCESTRAL SPECIES	23	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164479	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b.b.b ##30	ENSGT00980000198488.m.a.a.a.b.b.a.a ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.b.b.b.p #31	ENSGT00940000162213.g	ENSGT00940000158668.c #34
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b.b.b ##30	ENSGT00980000198488.m.a.a.a.b.b.a.a ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00980000198488.m.b.b.b.p #31	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Crab-eating macaque	MODERN SPECIES	14	PSORS1C2 (ENSMFAG00000053880) #10	CDSN (ENSMFAG00000002361) #11	C6orf15 (ENSMFAG00000032861) #12	MUC21 (ENSMFAG00000002226)	ENSMFAG00000036057	SFTA2 (ENSMFAG00000058402) #13	VARS2 (ENSMFAG00000042367) #14	GTF2H4 (ENSMFAG00000022244) #15	DDR1 (ENSMFAG00000033051) #16	IER3 (ENSMFAG00000035656) #17	FLOT1 (ENSMFAG00000002025) #18	TUBB (ENSMFAG00000044340) #19	MDC1 (ENSMFAG00000034367)	NRM (ENSMFAG00000061761) #20	PPP1R18 (ENSMFAG00000002399) #21	DHX16 (ENSMFAG00000003575) #22	ENSMFAG00000048962	C6orf136 (ENSMFAG00000000438) #23	MRPS18B (ENSMFAG00000003966) #25	PPP1R10 (ENSMFAG00000035544) #26	ABCF1 (ENSMFAG00000001346) #27	PRR3 (ENSMFAG00000045525) #28	GNL1 (ENSMFAG00000001167) #29	ENSMFAG00000060286 ##30	ENSMFAG00000035330 ##30	RPP21 (ENSMFAG00000055462) #32	TRIM39 (ENSMFAG00000046182) #33	ENSMFAG00000046125 #31	TRIM26 (ENSMFAG00000029818) #34	TRIM15 (ENSMFAG00000035011) #35	TRIM10 (ENSMFAG00000039062) #36
Rhesus	MODERN SPECIES	14	CDSN (ENSMMUG00000015676) #11	C4H6orf15 (ENSMMUG00000057952) #12	ENSMMUG00000063206	ENSMMUG00000060942	MUCL3 (ENSMMUG00000018615)	SFTA2 (ENSMMUG00000057864) #13	VARS2 (ENSMMUG00000018609) #14	GTF2H4 (ENSMMUG00000018605) #15	DDR1 (ENSMMUG00000018601) #16	IER3 (ENSMMUG00000064297) #17	FLOT1 (ENSMMUG00000014071) #18	TUBB (ENSMMUG00000030028) #19	MDC1 (ENSMMUG00000023685)	NRM (ENSMMUG00000017194) #20	PPP1R18 (ENSMMUG00000019961) #21	DHX16 (ENSMMUG00000019960) #22	ATAT1 (ENSMMUG00000051407) #23	MRPS18B (ENSMMUG00000006525) #25	PPP1R10 (ENSMMUG00000006524) #26	ABCF1 (ENSMMUG00000001886) #27	PRR3 (ENSMMUG00000013893) #28	GNL1 (ENSMMUG00000020077) #29	MAMU-E (ENSMMUG00000055242) ##30	RPP21 (ENSMMUG00000011682) #33	ENSMMUG00000053776	ENSMMUG00000060527	TRIM26 (ENSMMUG00000023679) #34	TRIM15 (ENSMMUG00000002890) #35	TRIM10 (ENSMMUG00000012129) #36	TRIM40 (ENSMMUG00000058580) #37	ENSMMUG00000012125
Pig-tailed macaque	MODERN SPECIES	270	CDSN (ENSMNEG00000037939) #11	C6orf15 (ENSMNEG00000040093) #12	MUC22 (ENSMNEG00000020400)	ENSMNEG00000031174	ENSMNEG00000034832	SFTA2 (ENSMNEG00000036271) #13	VARS2 (ENSMNEG00000043163) #14	GTF2H4 (ENSMNEG00000028676) #15	DDR1 (ENSMNEG00000038277) #16	IER3 (ENSMNEG00000033438) #17	FLOT1 (ENSMNEG00000037851) #18	TUBB (ENSMNEG00000044824) #19	MDC1 (ENSMNEG00000044964)	NRM (ENSMNEG00000004189) #20	PPP1R18 (ENSMNEG00000036359) #21	DHX16 (ENSMNEG00000014580) #22	C6orf136 (ENSMNEG00000042094) #23	ATAT1 (ENSMNEG00000036024) #24	MRPS18B (ENSMNEG00000045059) #25	PPP1R10 (ENSMNEG00000040255) #26	ABCF1 (ENSMNEG00000035697) #27	PRR3 (ENSMNEG00000030018) #28	GNL1 (ENSMNEG00000031618) #29	ENSMNEG00000030835 ##30	ENSMNEG00000022075	ENSMNEG00000036536 ##30	ENSMNEG00000027449	TRIM39 (ENSMNEG00000034999) #33	ENSMNEG00000001317	ENSMNEG00000027459	TRIM26 (ENSMNEG00000044605) #34
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc.v #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b.a.a ##30	ENSGT00900000141074.e.a.a.b	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.b.a.b ##30	ENSGT00940000162213.g	ENSGT00940000158668.c #34	ENSGT00940000162589 #35
Olive baboon	MODERN SPECIES	16	PSORS1C2 (ENSPANG00000024487) #10	CDSN (ENSPANG00000047914) #11	C6orf15 (ENSPANG00000011097) #12	ENSPANG00000031147	ENSPANG00000009406	SFTA2 (ENSPANG00000030986) #13	VARS2 (ENSPANG00000018481) #14	GTF2H4 (ENSPANG00000026494) #15	DDR1 (ENSPANG00000024488) #16	IER3 (ENSPANG00000015956) #17	FLOT1 (ENSPANG00000015955) #18	ENSPANG00000015954 #19	MDC1 (ENSPANG00000015953)	NRM (ENSPANG00000007629) #20	PPP1R18 (ENSPANG00000010763) #21	DHX16 (ENSPANG00000018482) #22	C6orf136 (ENSPANG00000017650) #23	ATAT1 (ENSPANG00000017649) #24	MRPS18B (ENSPANG00000017647) #25	PPP1R10 (ENSPANG00000020095) #26	ABCF1 (ENSPANG00000022237) #27	PRR3 (ENSPANG00000023072) #28	GNL1 (ENSPANG00000020097) #29	ENSPANG00000040191 ##30	ENSPANG00000040661	RPP21 (ENSPANG00000050201) #32	TRIM39 (ENSPANG00000000655) #33	ENSPANG00000047992	ENSPANG00000014872	TRIM26 (ENSPANG00000000654) #34	TRIM15 (ENSPANG00000010495) #35
Cercopithecinae_d	ANCESTRAL SPECIES	152	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc.v #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b.b ##30
Drill	MODERN SPECIES	1285		ENSMLEG00000036251	MUC22 (ENSMLEG00000038619)	ENSMLEG00000038641	ENSMLEG00000035740	SFTA2 (ENSMLEG00000037583) #13	VARS2 (ENSMLEG00000041728) #14	GTF2H4 (ENSMLEG00000042941) #15	DDR1 (ENSMLEG00000028064) #16	IER3 (ENSMLEG00000033149) #17	FLOT1 (ENSMLEG00000031605) #18	TUBB (ENSMLEG00000037482) #19	MDC1 (ENSMLEG00000023736)	NRM (ENSMLEG00000040330) #20	PPP1R18 (ENSMLEG00000040670) #21	DHX16 (ENSMLEG00000043805) #22	C6orf136 (ENSMLEG00000038460) #23	ATAT1 (ENSMLEG00000028197) #24	MRPS18B (ENSMLEG00000033833) #25	PPP1R10 (ENSMLEG00000035721) #26	ABCF1 (ENSMLEG00000027294) #27	PRR3 (ENSMLEG00000035986) #28	GNL1 (ENSMLEG00000030252) #29	HLA-E (ENSMLEG00000005547) ##30
Sooty mangabey	MODERN SPECIES	310	C6orf15 (ENSCATG00000039407) #12	ENSCATG00000042410	MUC22 (ENSCATG00000010871)	MUC21 (ENSCATG00000036484)	ENSCATG00000040184	SFTA2 (ENSCATG00000042486) #13	VARS2 (ENSCATG00000032554) #14	GTF2H4 (ENSCATG00000043577) #15	DDR1 (ENSCATG00000035224) #16	IER3 (ENSCATG00000031658) #17	FLOT1 (ENSCATG00000044224) #18	TUBB (ENSCATG00000014335) #19	ENSCATG00000001220	NRM (ENSCATG00000036048) #20	PPP1R18 (ENSCATG00000041968) #21	DHX16 (ENSCATG00000021666) #22	C6orf136 (ENSCATG00000010530) #23	ATAT1 (ENSCATG00000040212) #24	MRPS18B (ENSCATG00000040250) #25	PPP1R10 (ENSCATG00000039578) #26	ABCF1 (ENSCATG00000041106) #27	PRR3 (ENSCATG00000043741) #28	GNL1 (ENSCATG00000045232) #29	HLA-E (ENSCATG00000043871) ##30
Rhinopithecus	ANCESTRAL SPECIES	109	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164479	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00900000141074.e.a.a	ENSGT00940000154126.h #33	ENSGT00910000146974	ENSGT00980000198488.m.b.a.b ##30	ENSGT00940000162213.g	ENSGT00940000158668.c #34	ENSGT00940000162589 #35
Black snub-nosed monkey	MODERN SPECIES	2355	C6orf15 (ENSRBIG00000044291) #12	ENSRBIG00000044295	MUC22 (ENSRBIG00000044324)	ENSRBIG00000044297	ENSRBIG00000030514	SFTA2 (ENSRBIG00000029336) #13	VARS2 (ENSRBIG00000032725) #14	GTF2H4 (ENSRBIG00000024686) #15	DDR1 (ENSRBIG00000028143) #16	IER3 (ENSRBIG00000027981) #17	FLOT1 (ENSRBIG00000037335) #18	ENSRBIG00000034281 #19	MDC1 (ENSRBIG00000031951)	NRM (ENSRBIG00000038213) #20	ENSRBIG00000035129 #21	DHX16 (ENSRBIG00000039655) #22	C6orf136 (ENSRBIG00000042620) #23	ATAT1 (ENSRBIG00000032471) #24	MRPS18B (ENSRBIG00000037128) #25	PPP1R10 (ENSRBIG00000029983) #26	ABCF1 (ENSRBIG00000043397) #27	PRR3 (ENSRBIG00000007355) #28	GNL1 (ENSRBIG00000019143) #29	HLA-E (ENSRBIG00000036367) ##30	ENSRBIG00000040433	TRIM39 (ENSRBIG00000040889) #33	ENSRBIG00000021139	ENSRBIG00000038175 ##30	ENSRBIG00000036372	TRIM26 (ENSRBIG00000030822) #34	TRIM15 (ENSRBIG00000034737) #35
Golden snub-nosed monkey	MODERN SPECIES	1383	C6orf15 (ENSRROG00000029009) #12	HCG22 (ENSRROG00000036183)	MUC22 (ENSRROG00000043299)	MUC21 (ENSRROG00000009141)	ENSRROG00000042047	SFTA2 (ENSRROG00000015644) #13	VARS2 (ENSRROG00000043847) #14	GTF2H4 (ENSRROG00000045346) #15	DDR1 (ENSRROG00000013631) #16	IER3 (ENSRROG00000037752) #17	FLOT1 (ENSRROG00000031263) #18	ENSRROG00000035442 #19	MDC1 (ENSRROG00000006372)	NRM (ENSRROG00000031064) #20	PPP1R18 (ENSRROG00000032062) #21	DHX16 (ENSRROG00000031909) #22	C6orf136 (ENSRROG00000045032) #23	ATAT1 (ENSRROG00000040799) #24	MRPS18B (ENSRROG00000017497) #25	PPP1R10 (ENSRROG00000036243) #26	ABCF1 (ENSRROG00000036112) #27	PRR3 (ENSRROG00000034036) #28	GNL1 (ENSRROG00000030029) #29	HLA-E (ENSRROG00000043028) ##30	TRIM39 (ENSRROG00000036496) #33	ENSRROG00000033128	ENSRROG00000036835 ##30	ENSRROG00000034640	TRIM26 (ENSRROG00000037819) #34	TRIM15 (ENSRROG00000002653) #35	TRIM10 (ENSRROG00000028712) #36
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00390000010291 #12	ENSGT00940000164570	ENSGT00940000164618	ENSGT00940000164479	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A.i #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Cebidae	ANCESTRAL SPECIES	39	ENSGT00940000164570	ENSGT00940000164618	ENSGT00940000164479	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A.i #18	ENSGT00560000077232.A.j #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00980000198488.n ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37
Cebidae_a	ANCESTRAL SPECIES	93	ENSGT00940000164570	ENSGT00940000164618	ENSGT00940000164479	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A.j #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00390000003781.e.b.i.a.a.a	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641
Bolivian squirrel monkey	MODERN SPECIES	264	C6orf15 (ENSSBOG00000023236) #12	MUC22 (ENSSBOG00000030608)	ENSSBOG00000023692	ENSSBOG00000029394	SFTA2 (ENSSBOG00000019073) #13	VARS2 (ENSSBOG00000033240) #14	GTF2H4 (ENSSBOG00000030725) #15	DDR1 (ENSSBOG00000033292) #16	IER3 (ENSSBOG00000021654) #17	ENSSBOG00000035891 #18	TUBB (ENSSBOG00000020987) #19	MDC1 (ENSSBOG00000032852)	NRM (ENSSBOG00000028303) #20	PPP1R18 (ENSSBOG00000002613) #21	ENSSBOG00000022247	DHX16 (ENSSBOG00000020142) #22	C6orf136 (ENSSBOG00000031647) #23	ATAT1 (ENSSBOG00000000047) #24	MRPS18B (ENSSBOG00000023414) #25	PPP1R10 (ENSSBOG00000021454) #26	ENSSBOG00000019077	PRR3 (ENSSBOG00000026415) #28	GNL1 (ENSSBOG00000031909) #29	ENSSBOG00000030408	HLA-E (ENSSBOG00000019728) ##30	ENSSBOG00000022296
Capuchin	MODERN SPECIES	440	ENSCCAG00000028097	SFTA2 (ENSCCAG00000029652) #13	VARS2 (ENSCCAG00000037907) #14	GTF2H4 (ENSCCAG00000021702) #15	DDR1 (ENSCCAG00000027343) #16	ENSCCAG00000036454	ENSCCAG00000006732	IER3 (ENSCCAG00000021244) #17	ENSCCAG00000034270 #18	ENSCCAG00000024382 #19	MDC1 (ENSCCAG00000023691)	ENSCCAG00000022402	NRM (ENSCCAG00000029982) #20	PPP1R18 (ENSCCAG00000026370) #21	ENSCCAG00000034759	DHX16 (ENSCCAG00000025435) #22	ATAT1 (ENSCCAG00000027296) #24	ENSCCAG00000017044 #23	MRPS18B (ENSCCAG00000037423) #25	PPP1R10 (ENSCCAG00000030052) #26	ABCF1 (ENSCCAG00000026192) #27	PRR3 (ENSCCAG00000032612) #28	GNL1 (ENSCCAG00000037467) #29	HLA-E (ENSCCAG00000025807) ##30	ENSCCAG00000002515	ENSCCAG00000029615 ##30	ENSCCAG00000029356	ENSCCAG00000021098	TRIM39 (ENSCCAG00000036784) #33	TRIM26 (ENSCCAG00000025143) #34	TRIM15 (ENSCCAG00000021338) #35
Marmoset	MODERN SPECIES	16	C6orf15 (ENSCJAG00000019814) #12	ENSCJAG00000073912	MUC22 (ENSCJAG00000075478)	MUCL3 (ENSCJAG00000081019)	SFTA2 (ENSCJAG00000080233) #13	VARS2 (ENSCJAG00000019826) #14	GTF2H4 (ENSCJAG00000048231) #15	ENSCJAG00000019860 #16	ENSCJAG00000047952	IER3 (ENSCJAG00000045140) #17	FLOT1 (ENSCJAG00000019874) #18	TUBB (ENSCJAG00000048479) #19	MDC1 (ENSCJAG00000019900)	NRM (ENSCJAG00000019904) #20	PPP1R18 (ENSCJAG00000019906) #21	DHX16 (ENSCJAG00000019914) #22	C6orf136 (ENSCJAG00000019930) #23	MRPS18B (ENSCJAG00000019949) #25	PPP1R10 (ENSCJAG00000019956) #26	ABCF1 (ENSCJAG00000019968) #27	PRR3 (ENSCJAG00000039422) #28	GNL1 (ENSCJAG00000019996) #29	HLA-E (ENSCJAG00000042967) ##30	ENSCJAG00000047727 ##30	RPP21 (ENSCJAG00000069205) #32	ENSCJAG00000086149	TRIM39 (ENSCJAG00000020681) #33	ENSCJAG00000071290	TRIM26 (ENSCJAG00000047960) #34	TRIM15 (ENSCJAG00000020699) #35	TRIM10 (ENSCJAG00000020701) #36
Mas night monkey	MODERN SPECIES	1260			ENSANAG00000029607	ENSANAG00000026062	ENSANAG00000028127	SFTA2 (ENSANAG00000032036) #13	VARS2 (ENSANAG00000038018) #14	GTF2H4 (ENSANAG00000026288) #15	DDR1 (ENSANAG00000032885) #16	IER3 (ENSANAG00000031788) #17	FLOT1 (ENSANAG00000019905) #18	TUBB (ENSANAG00000034194) #19	MDC1 (ENSANAG00000025163)	NRM (ENSANAG00000024489) #20	PPP1R18 (ENSANAG00000027247) #21	DHX16 (ENSANAG00000024212) #22	C6orf136 (ENSANAG00000023823) #23	ATAT1 (ENSANAG00000027015) #24	MRPS18B (ENSANAG00000021210) #25	PPP1R10 (ENSANAG00000032283) #26	ABCF1 (ENSANAG00000019758) #27	PRR3 (ENSANAG00000021850) #28	GNL1 (ENSANAG00000028106) #29
Tarsier	MODERN SPECIES	1641														NRM (ENSTSYG00000033789) #20	PPP1R18 (ENSTSYG00000011356) #21	DHX16 (ENSTSYG00000029805) #22	CUNH6orf136 (ENSTSYG00000003336) #23	ATAT1 (ENSTSYG00000003334) #24	MRPS18B (ENSTSYG00000003333) #25	PPP1R10 (ENSTSYG00000003315) #26
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164570	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000162589 #35	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641	ENSGT00390000001153
Lemuriformes_a	ANCESTRAL SPECIES	117	ENSGT00730000111474 #11	ENSGT00390000010291 #12	ENSGT00960000186815	ENSGT00940000164618	ENSGT00390000016847	ENSGT00390000011767 #13	ENSGT00940000159890 #14	ENSGT00390000014159 #15	ENSGT00940000159733 #16	ENSGT00390000003213 #17	ENSGT00560000077232.A #18	ENSGT00940000154370.pc #19	ENSGT00940000161757	ENSGT00390000008146 #20	ENSGT00530000064035.a #21	ENSGT00940000158480 #22	ENSGT00390000008658 #23	ENSGT00390000008276 #24	ENSGT00390000010554 #25	ENSGT00940000159263 #26	ENSGT00940000158329 #27	ENSGT00940000161804 #28	ENSGT00940000158047 #29	ENSGT00980000198488.m.a.a.a.b ##30	ENSGT00390000003020 #32	ENSGT00940000154126.h #33	ENSGT00940000158668.c #34	ENSGT00940000161525 #36	ENSGT00710000106875 #37	ENSGT00940000162641	ENSGT00390000001153
Coquerels sifaka	MODERN SPECIES	550	CDSN (ENSPCOG00000017174) #11	C6orf15 (ENSPCOG00000019120) #12	ENSPCOG00000012667	ENSPCOG00000014787	ENSPCOG00000027756	SFTA2 (ENSPCOG00000002888) #13	GTF2H4 (ENSPCOG00000022557) #15	VARS2 (ENSPCOG00000014839) #14	DDR1 (ENSPCOG00000020265) #16	IER3 (ENSPCOG00000022268) #17	FLOT1 (ENSPCOG00000013641) #18	TUBB (ENSPCOG00000022809) #19	ENSPCOG00000027754	NRM (ENSPCOG00000009272) #20	PPP1R18 (ENSPCOG00000015641) #21	DHX16 (ENSPCOG00000013298) #22	C6orf136 (ENSPCOG00000012959) #23	ATAT1 (ENSPCOG00000027406) #24	MRPS18B (ENSPCOG00000015431) #25	PPP1R10 (ENSPCOG00000018147) #26	ABCF1 (ENSPCOG00000027213) #27	PRR3 (ENSPCOG00000018694) #28	GNL1 (ENSPCOG00000015669) #29	ENSPCOG00000000107	HLA-E (ENSPCOG00000006645) ##30	RPP21 (ENSPCOG00000024263) #32	TRIM39 (ENSPCOG00000019078) #33	TRIM26 (ENSPCOG00000017528) #34	ENSPCOG00000018346 ##30	ENSPCOG00000023757	TRIM10 (ENSPCOG00000006661) #36
Greater bamboo lemur	MODERN SPECIES	919							MAPK9 (ENSPSMG00000021141)	RASGEF1C (ENSPSMG00000000118)	ENSPSMG00000000135	IER3 (ENSPSMG00000000150) #17	FLOT1 (ENSPSMG00000000202) #18	TUBB (ENSPSMG00000000399) #19	ENSPSMG00000000457	NRM (ENSPSMG00000000470) #20	PPP1R18 (ENSPSMG00000000477) #21	DHX16 (ENSPSMG00000000593) #22	C6orf136 (ENSPSMG00000000685) #23	ATAT1 (ENSPSMG00000000864) #24	MRPS18B (ENSPSMG00000001121) #25	PPP1R10 (ENSPSMG00000001202) #26	ABCF1 (ENSPSMG00000001418) #27	ENSPSMG00000001480 #28	GNL1 (ENSPSMG00000001579) #29	ENSPSMG00000001852 ##30	ENSPSMG00000002136	ENSPSMG00000002138	ENSPSMG00000002188	ENSPSMG00000002226
Mouse lemur	MODERN SPECIES	28	ENSMICG00000001511 #7	TCF19 (ENSMICG00000037849) #8	CCHCR1 (ENSMICG00000001488) #9	PSORS1C2 (ENSMICG00000042321) #10	CDSN (ENSMICG00000010150) #11	C6orf15 (ENSMICG00000010138) #12	VARS2 (ENSMICG00000005365) #14	GTF2H4 (ENSMICG00000047381) #15	DDR1 (ENSMICG00000007629) #16	IER3 (ENSMICG00000026480) #17	FLOT1 (ENSMICG00000014564) #18	TUBB (ENSMICG00000010647) #19	ENSMICG00000036702	NRM (ENSMICG00000014861) #20	PPP1R18 (ENSMICG00000014846) #21	DHX16 (ENSMICG00000014819) #22	C6orf136 (ENSMICG00000014805) #23	ATAT1 (ENSMICG00000014783) #24	MRPS18B (ENSMICG00000031536) #25	PPP1R10 (ENSMICG00000038776) #26	ENSMICG00000031444	ABCF1 (ENSMICG00000014745) #27	PRR3 (ENSMICG00000042955) #28	GNL1 (ENSMICG00000014708) #29	ENSMICG00000028052	ENSMICG00000004749	TRIM10 (ENSMICG00000044593) #36	RNF39 (ENSMICG00000034392)	PPP1R11 (ENSMICG00000034291)	POLR1H (ENSMICG00000045696)	ENSMICG00000008613
Bushbaby	MODERN SPECIES	146	PSORS1C2 (ENSOGAG00000000616) #10	CDSN (ENSOGAG00000000614) #11	ENSOGAG00000025800	HCG22 (ENSOGAG00000034695)	ENSOGAG00000028101	ENSOGAG00000032678	VARS2 (ENSOGAG00000006087) #14	GTF2H4 (ENSOGAG00000026192) #15	DDR1 (ENSOGAG00000032934) #16	IER3 (ENSOGAG00000034818) #17	FLOT1 (ENSOGAG00000008316) #18	ENSOGAG00000032213 #19	MDC1 (ENSOGAG00000026246)	NRM (ENSOGAG00000008308) #20	PPP1R18 (ENSOGAG00000008305) #21	DHX16 (ENSOGAG00000008300) #22	C6orf136 (ENSOGAG00000006805) #23	ATAT1 (ENSOGAG00000026366) #24	MRPS18B (ENSOGAG00000004435) #25	PPP1R10 (ENSOGAG00000004433) #26	ABCF1 (ENSOGAG00000033596) #27	PRR3 (ENSOGAG00000004430) #28	ENSOGAG00000004428 #29	HLA-E (ENSOGAG00000027556) ##30	ENSOGAG00000026541	ENSOGAG00000031061	TRIM39 (ENSOGAG00000000903) #33	TRIM26 (ENSOGAG00000032939) #34	TRIM15 (ENSOGAG00000016905) #35	TRIM10 (ENSOGAG00000001602) #36	TRIM40 (ENSOGAG00000030532) #37