Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484 #10	ENSGT00940000162473 #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #15	ENSGT00940000153476.a #17	ENSGT01090000260100.B #18	ENSGT00940000158447 #19	ENSGT00900000143170	ENSGT00530000063000.a.b.b #20	ENSGT00940000154030.a.a #21	ENSGT00940000158159	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #23	ENSGT00390000013662 #24	ENSGT00940000163732 #25
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484 #10	ENSGT00940000162473 #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #15	ENSGT00940000153476.a #17	ENSGT01090000260100.B #18	ENSGT00940000158447 #19	ENSGT00530000063000.a.b.b #20	ENSGT00940000154030.a.a #21	ENSGT00940000158159	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #23	ENSGT00390000013662 #24	ENSGT00940000163732 #25	ENSGT00940000165655 #27
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	8	SNED1 (ENSMMMG00000007168) #7	MTERF4 (ENSMMMG00000007236) #8	ENSMMMG00000007249 #9	ENSMMMG00000007277 #10	ENSMMMG00000007280 #11	HDLBP (ENSMMMG00000007299) #12	SEPTIN2 (ENSMMMG00000007576) #13	ENSMMMG00000007620 #14	ENSMMMG00000007659 #15	STK25 (ENSMMMG00000007681) #16	ENSMMMG00000007706 #17	BOK (ENSMMMG00000007720) #18	THAP4 (ENSMMMG00000007741) #19	ATG4B (ENSMMMG00000007760) #20	DTYMK (ENSMMMG00000007781) #21	D2HGDH (ENSMMMG00000007799) #22	NEU4 (ENSMMMG00000007853) #23	PDCD1 (ENSMMMG00000007868) #24	ENSMMMG00000007882 #25	ENSMMMG00000007896 #26	ENSMMMG00000007913 #27
Alpin marmot	MODERN SPECIES	275																ENSMMMG00000007944 ##22
Marmotini_b	ANCESTRAL SPECIES	41	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473 #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #15	ENSGT00940000153476.a #17	ENSGT01090000260100.B #18	ENSGT00940000158447 #19	ENSGT00530000063000.a.b.b #20	ENSGT00940000154030.a.a #21	ENSGT00940000158159	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #23	ENSGT00390000013662 #24	ENSGT00940000163732 #25	ENSGT00940000165655 #27
Arctic ground squirrel	MODERN SPECIES	972										BOK (ENSUPAG00010003241) #18	THAP4 (ENSUPAG00010003245) #19	ATG4B (ENSUPAG00010003261) #20	DTYMK (ENSUPAG00010003278) #21	ENSUPAG00010003293	ING5 (ENSUPAG00010003300)	D2HGDH (ENSUPAG00010003310) #22
Squirrel	MODERN SPECIES	345	GPR35 (ENSSTOG00000026086)	ENSSTOG00000022231	KIF1A (ENSSTOG00000021868)	AGXT (ENSSTOG00000008004)	MAB21L4 (ENSSTOG00000006007)	SNED1 (ENSSTOG00000031779) #7	ENSSTOG00000016306 #11	HDLBP (ENSSTOG00000013331) #12	SEPTIN2 (ENSSTOG00000013357) #13	FARP2 (ENSSTOG00000022815) #15	STK25 (ENSSTOG00000026742) #17	BOK (ENSSTOG00000028135) #18	THAP4 (ENSSTOG00000015998) #19	ATG4B (ENSSTOG00000014734) #20	ING5 (ENSSTOG00000005977)	D2HGDH (ENSSTOG00000023380) #22	PDCD1 (ENSSTOG00000022396) #24	ENSSTOG00000025755 #25
Eurasian red squirrel	MODERN SPECIES	12	SNED1 (ENSSVLG00005010615) #7	MTERF4 (ENSSVLG00005010874) #8	ENSSVLG00005010962 #9	ENSSVLG00005011084 #10	ENSSVLG00005011132 #11	HDLBP (ENSSVLG00005011227) #12	ENSSVLG00005011546 #13	FARP2 (ENSSVLG00005011791) #15	STK25 (ENSSVLG00005011880) #17	BOK (ENSSVLG00005012052) #18	THAP4 (ENSSVLG00005012097) #19	ENSSVLG00005012212	ATG4B (ENSSVLG00005012261) #20	DTYMK (ENSSVLG00005012417) #21	ING5 (ENSSVLG00005012450)	D2HGDH (ENSSVLG00005012513) #22	GAL3ST2 (ENSSVLG00005012622)	NEU4 (ENSSVLG00005012671) #23	PDCD1 (ENSSVLG00005012721) #24	ENSSVLG00005012795 #25	PRDM9 (ENSSVLG00005012896)