Mammalia	ANCESTRAL SPECIES	7	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162	ENSGT00390000006126
Theria	ANCESTRAL SPECIES	5	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162	ENSGT00390000006126
Eutheria	ANCESTRAL SPECIES	39	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00940000157674
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Glires	ANCESTRAL SPECIES	14	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.b ##29	ENSGT00940000156369 #31	ENSGT00940000160670 #32	ENSGT00390000009048.a.b	ENSGT00390000005782 #33	ENSGT00530000064469 #34	ENSGT00940000157592 #35	ENSGT00940000157299 #36	ENSGT00940000156973 #37
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.a ##29	ENSGT00940000156369 #31	ENSGT00940000160670 #32	ENSGT00390000009048.a.b	ENSGT00390000005782 #33	ENSGT00530000064469 #34	ENSGT00940000157592 #35	ENSGT00940000157299 #36	ENSGT00940000156973 #37
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT00940000156369 #31	ENSGT00940000160670 #32	ENSGT00390000009048.a.b	ENSGT00390000005782 #33	ENSGT00530000064469 #34	ENSGT00940000157592 #35	ENSGT00940000157299 #36	ENSGT00940000156973 #37	ENSGT00940000154997
Golden Hamster	MODERN SPECIES	686	Sned1 (ENSMAUG00000017367) #7	Mterf4 (ENSMAUG00000000081) #8	Pask (ENSMAUG00000018648) #9	ENSMAUG00000013558 #10	Ano7 (ENSMAUG00000013132) #11	Hdlbp (ENSMAUG00000017743) #12	ENSMAUG00000011950 #13	Farp2 (ENSMAUG00000013770) #14	Stk25 (ENSMAUG00000009418) #15	Bok (ENSMAUG00000011149) #16	ENSMAUG00000009008 #17	Atg4b (ENSMAUG00000002031) #18	Dtymk (ENSMAUG00000000268) #19	ENSMAUG00000012792 #20	Ing5 (ENSMAUG00000010995) #21	D2hgdh (ENSMAUG00000008991) #22	ENSMAUG00000006662 #23	ENSMAUG00000018549 #24	Neu4 (ENSMAUG00000004468) #25	Pdcd1 (ENSMAUG00000000914) #26	Fam174a (ENSMAUG00000010921) #27	St8sia4 (ENSMAUG00000008068) #28	Slco4c1 (ENSMAUG00000016086) #29	ENSMAUG00000016737 #30	Pam (ENSMAUG00000013243) #31	Gin1 (ENSMAUG00000014864) #32	Macir (ENSMAUG00000013352) #33	ENSMAUG00000018117 #34	Nudt12 (ENSMAUG00000010818) #35	Efna5 (ENSMAUG00000016198) #36	ENSMAUG00000012566 #37
Chinese hamster chok1gshd	MODERN SPECIES	1	Sned1 (ENSCGRG00001002826) #7	Mterf4 (ENSCGRG00001006818) #8	Pask (ENSCGRG00001024785) #9	ENSCGRG00001001852 #10	Ano7 (ENSCGRG00001006513) #11	Hdlbp (ENSCGRG00001006086) #12	ENSCGRG00001009996 #13	Farp2 (ENSCGRG00001003923) #14	Stk25 (ENSCGRG00001005671) #15	Bok (ENSCGRG00001024808) #16	Thap4 (ENSCGRG00001002632) #17	ENSCGRG00001006751	Atg4b (ENSCGRG00001001760) #18	Dtymk (ENSCGRG00001000666) #19	Ing5 (ENSCGRG00001004863) #21	D2hgdh (ENSCGRG00001002513) #22	ENSCGRG00001000728	Neu4 (ENSCGRG00001009931) #25	Pdcd1 (ENSCGRG00001002477) #26	Fam174a (ENSCGRG00001002695) #27	ENSCGRG00001010345	St8sia4 (ENSCGRG00001004612) #28	ENSCGRG00001004644	ENSCGRG00001003799	Slco4c1 (ENSCGRG00001010874) #29	ENSCGRG00001010780	Pam (ENSCGRG00001011006) #31	Gin1 (ENSCGRG00001004458) #32	Ppip5k2 (ENSCGRG00001002274)	Macir (ENSCGRG00001009855) #33	ENSCGRG00001003228 #34
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.a ##29	ENSGT00940000156369 #31	ENSGT00940000160670 #32	ENSGT00390000009048.a.b	ENSGT00390000005782 #33	ENSGT00530000064469 #34	ENSGT00940000157592 #35	ENSGT00940000157299 #36	ENSGT00940000156973 #37
Prairie vole	MODERN SPECIES	354	Sned1 (ENSMOCG00000002594) #7	Mterf4 (ENSMOCG00000010203) #8	Pask (ENSMOCG00000016982) #9	ENSMOCG00000012798	Ano7 (ENSMOCG00000000907) #11	Hdlbp (ENSMOCG00000006679) #12	ENSMOCG00000014906 #13	Farp2 (ENSMOCG00000021782) #14	Stk25 (ENSMOCG00000017547) #15	Bok (ENSMOCG00000016270) #16	ENSMOCG00000014492 #17	Atg4b (ENSMOCG00000013012) #18	Dtymk (ENSMOCG00000006228) #19	ENSMOCG00000005204 #19	Ing5 (ENSMOCG00000014178) #21	D2hgdh (ENSMOCG00000020154) #22	ENSMOCG00000007726	Neu4 (ENSMOCG00000016739) #25	Pdcd1 (ENSMOCG00000014895) #26	ENSMOCG00000003363	Fam174a (ENSMOCG00000015018) #27	St8sia4 (ENSMOCG00000013060) #28	ENSMOCG00000009291	ENSMOCG00000006288	Slco4c1 (ENSMOCG00000004368) #29	ENSMOCG00000018358	ENSMOCG00000006301	Pam (ENSMOCG00000012283) #31	Gin1 (ENSMOCG00000021884) #32	Ppip5k2 (ENSMOCG00000020966)	Macir (ENSMOCG00000018727) #33
Northern American deer mouse	MODERN SPECIES	4	Sned1 (ENSPEMG00000008505) #7	Mterf4 (ENSPEMG00000026952) #8	Pask (ENSPEMG00000022938) #9	Ppp1r7 (ENSPEMG00000001859)	Ano7 (ENSPEMG00000011761) #11	Hdlbp (ENSPEMG00000017704) #12	ENSPEMG00000022937 #13	Farp2 (ENSPEMG00000023787) #14	Stk25 (ENSPEMG00000023590) #15	Bok (ENSPEMG00000023399) #16	Thap4 (ENSPEMG00000022638) #17	ENSPEMG00000002288	Atg4b (ENSPEMG00000023843) #18	Dtymk (ENSPEMG00000023813) #19	Ing5 (ENSPEMG00000021508) #21	D2hgdh (ENSPEMG00000021435) #22	ENSPEMG00000013727	Neu4 (ENSPEMG00000022695) #25	Pdcd1 (ENSPEMG00000010110) #26	ENSPEMG00000028919	ENSPEMG00000001999	ENSPEMG00000013367	Fam174a (ENSPEMG00000023963) #27	St8sia4 (ENSPEMG00000025143) #28	Slco4c1 (ENSPEMG00000020395) #29	ENSPEMG00000030212 ##29	ENSPEMG00000017201 ##29	ENSPEMG00000014680	Pam (ENSPEMG00000008719) #31	Gin1 (ENSPEMG00000028100) #32	Ppip5k2 (ENSPEMG00000010567)
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.b.b ##29	ENSGT01080000257410.D.d.b.a ##29	ENSGT00940000156369 #31	ENSGT00940000160670 #32	ENSGT00390000009048.a.b	ENSGT00390000005782 #33	ENSGT00530000064469 #34	ENSGT00940000157592 #35	ENSGT00940000157299 #36
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.b.b ##29	ENSGT00390000005782 #33	ENSGT00390000009048.a.b	ENSGT00940000160670 #32	ENSGT00940000156369 #31	ENSGT01080000257410.D.d.b.a ##29	ENSGT00940000158167	ENSGT00730000111317	ENSGT00390000017600
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.b.b ##29	ENSGT00390000005782 #33	ENSGT00390000009048.a.b	ENSGT00940000160670 #32	ENSGT00940000156369 #31	ENSGT01080000257410.D.d.b.a ##29	ENSGT00940000164023.c.b	ENSGT00940000158167	ENSGT00730000111317
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a.bb	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.b.b ##29	ENSGT00390000005782 #33	ENSGT00390000009048.a.b	ENSGT00940000160670 #32	ENSGT00940000156369 #31	ENSGT01080000257410.D.d.b.a ##29	ENSGT00940000164023.c.b	ENSGT00940000158167	ENSGT00730000111317
Mouse	MODERN SPECIES		Sned1 (ENSMUSG00000047793) #7	Mterf4 (ENSMUSG00000026273) #8	Pask (ENSMUSG00000026274) #9	Ppp1r7 (ENSMUSG00000026275)	Ano7 (ENSMUSG00000034107) #11	Hdlbp (ENSMUSG00000034088) #12	Septin2 (ENSMUSG00000026276) #13	Septin2 (ENSMUSG00000116048) #13	Farp2 (ENSMUSG00000034066) #14	Stk25 (ENSMUSG00000026277) #15	Bok (ENSMUSG00000026278) #16	Thap4 (ENSMUSG00000026279) #17	Atg4b (ENSMUSG00000026280) #18	Dtymk (ENSMUSG00000026281) #19	Ing5 (ENSMUSG00000026283) #21	D2hgdh (ENSMUSG00000073609) #22	Gal3st2 (ENSMUSG00000094651)	Gal3st2b (ENSMUSG00000093805)	Gal3st2c (ENSMUSG00000073608)	Neu4 (ENSMUSG00000034000) #25	Pdcd1 (ENSMUSG00000026285) #26	Fam174a (ENSMUSG00000051185) #27	St8sia4 (ENSMUSG00000040710) #28	Slco4c1 (ENSMUSG00000040693) #29	Slco6c1 (ENSMUSG00000026331) ##29	Macir (ENSMUSG00000044768) #33	Ppip5k2 (ENSMUSG00000040648)	Gin1 (ENSMUSG00000026333) #32	Pam (ENSMUSG00000026335) #31	Slco6d1 (ENSMUSG00000026336) ##29	Cntnap5b (ENSMUSG00000067028)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.z #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT01050000247607 #23	ENSGT00950000182923.B.a.bb	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00730000111385 #27	ENSGT01030000234535.F.b #28	ENSGT01080000257410.D.c #29	ENSGT01080000257410.D.d.b.b ##29	ENSGT00390000005782 #33	ENSGT00390000009048.a.b	ENSGT00940000160670 #32	ENSGT00940000156369 #31	ENSGT01080000257410.D.d.b.a ##29	ENSGT00940000164023.c.b	ENSGT00940000158167
spretus	MODERN SPECIES		Crocc2 (MGP_SPRETEiJ_G0015254)	Sned1 (MGP_SPRETEiJ_G0015255) #7	Mterf4 (MGP_SPRETEiJ_G0015256) #8	Pask (MGP_SPRETEiJ_G0015257) #9	Ppp1r7 (MGP_SPRETEiJ_G0015258)	Ano7 (MGP_SPRETEiJ_G0015259) #11	Hdlbp (MGP_SPRETEiJ_G0015260) #12	MGP_SPRETEiJ_G0015261 #13	Farp2 (MGP_SPRETEiJ_G0015262) #14	Stk25 (MGP_SPRETEiJ_G0015263) #15	Bok (MGP_SPRETEiJ_G0015264) #16	Thap4 (MGP_SPRETEiJ_G0015265) #17	Atg4b (MGP_SPRETEiJ_G0015266) #18	Dtymk (MGP_SPRETEiJ_G0015267) #19	Ing5 (MGP_SPRETEiJ_G0015268) #21	D2hgdh (MGP_SPRETEiJ_G0015269) #22	MGP_SPRETEiJ_G0015270 #23	MGP_SPRETEiJ_G0015271	MGP_SPRETEiJ_G0015272	Neu4 (MGP_SPRETEiJ_G0015273) #25	Pdcd1 (MGP_SPRETEiJ_G0015274) #26	Fam174a (MGP_SPRETEiJ_G0015275) #27	St8sia4 (MGP_SPRETEiJ_G0015276) #28	Slco4c1 (MGP_SPRETEiJ_G0015277) #29	MGP_SPRETEiJ_G0015278 ##29	Macir (MGP_SPRETEiJ_G0015279) #33	Ppip5k2 (MGP_SPRETEiJ_G0015280)	Gin1 (MGP_SPRETEiJ_G0015281) #32	Pam (MGP_SPRETEiJ_G0015282) #31	MGP_SPRETEiJ_G0015283 ##29	Cntnap5b (MGP_SPRETEiJ_G0015284)
Steppe mouse	MODERN SPECIES	2151								ENSMSIG00000015660 #14	ENSMSIG00000015638 #15	Bok (ENSMSIG00000015629) #16	ENSMSIG00000015626	Thap4 (ENSMSIG00000015596) #17	Atg4b (ENSMSIG00000015526) #18	Dtymk (ENSMSIG00000015486) #19	Ing5 (ENSMSIG00000015435) #21	ENSMSIG00000015376 #22
Ryukyu mouse	MODERN SPECIES		Crocc2 (MGP_CAROLIEiJ_G0014450)	Sned1 (MGP_CAROLIEiJ_G0014451) #7	Mterf4 (MGP_CAROLIEiJ_G0014452) #8	Pask (MGP_CAROLIEiJ_G0014453) #9	Ppp1r7 (MGP_CAROLIEiJ_G0014454)	Ano7 (MGP_CAROLIEiJ_G0014455) #11	Hdlbp (MGP_CAROLIEiJ_G0014456) #12	MGP_CAROLIEiJ_G0014457 #13	Farp2 (MGP_CAROLIEiJ_G0014458) #14	Stk25 (MGP_CAROLIEiJ_G0014459) #15	Bok (MGP_CAROLIEiJ_G0014460) #16	Thap4 (MGP_CAROLIEiJ_G0014461) #17	Atg4b (MGP_CAROLIEiJ_G0014462) #18	Dtymk (MGP_CAROLIEiJ_G0014463) #19	Ing5 (MGP_CAROLIEiJ_G0014464) #21	D2hgdh (MGP_CAROLIEiJ_G0014465) #22	MGP_CAROLIEiJ_G0014466	MGP_CAROLIEiJ_G0014467	MGP_CAROLIEiJ_G0014468	Neu4 (MGP_CAROLIEiJ_G0014469) #25	Pdcd1 (MGP_CAROLIEiJ_G0014470) #26	Fam174a (MGP_CAROLIEiJ_G0014471) #27	St8sia4 (MGP_CAROLIEiJ_G0014472) #28	Slco4c1 (MGP_CAROLIEiJ_G0014473) #29	Slco6c1 (MGP_CAROLIEiJ_G0014474) ##29	Macir (MGP_CAROLIEiJ_G0014475) #33	Ppip5k2 (MGP_CAROLIEiJ_G0014476)	Gin1 (MGP_CAROLIEiJ_G0014477) #32	Pam (MGP_CAROLIEiJ_G0014478) #31	MGP_CAROLIEiJ_G0014479 ##29	Cntnap5b (MGP_CAROLIEiJ_G0014480)
Shrew mouse	MODERN SPECIES	18	Crocc2 (MGP_PahariEiJ_G0027686)	Sned1 (MGP_PahariEiJ_G0027687) #7	Mterf4 (MGP_PahariEiJ_G0027688) #8	Pask (MGP_PahariEiJ_G0027689) #9	Ppp1r7 (MGP_PahariEiJ_G0027690)	Ano7 (MGP_PahariEiJ_G0027691) #11	Hdlbp (MGP_PahariEiJ_G0027692) #12	MGP_PahariEiJ_G0027693 #13	Farp2 (MGP_PahariEiJ_G0027694) #14	Stk25 (MGP_PahariEiJ_G0027695) #15	Bok (MGP_PahariEiJ_G0027696) #16	Thap4 (MGP_PahariEiJ_G0027697) #17	Atg4b (MGP_PahariEiJ_G0027698) #18	Dtymk (MGP_PahariEiJ_G0027699) #19	Ing5 (MGP_PahariEiJ_G0027700) #21	D2hgdh (MGP_PahariEiJ_G0027701) #22	MGP_PahariEiJ_G0027702	MGP_PahariEiJ_G0027703	MGP_PahariEiJ_G0027704	Neu4 (MGP_PahariEiJ_G0027705) #25	Pdcd1 (MGP_PahariEiJ_G0027706) #26	Fam174a (MGP_PahariEiJ_G0027707) #27	St8sia4 (MGP_PahariEiJ_G0027708) #28	Slco4c1 (MGP_PahariEiJ_G0027709) #29	MGP_PahariEiJ_G0027710 ##29	Macir (MGP_PahariEiJ_G0027711) #33	Ppip5k2 (MGP_PahariEiJ_G0027712)	Gin1 (MGP_PahariEiJ_G0027713) #32	Pam (MGP_PahariEiJ_G0027714) #31	Cdh20 (MGP_PahariEiJ_G0027715)	Rnf152 (MGP_PahariEiJ_G0027716)
Rat	MODERN SPECIES	19	Pask (ENSRNOG00000016888) #9	LOC102549694 (ENSRNOG00000066227)	AABR07068351.1 (ENSRNOG00000016974) #10	Ano7 (ENSRNOG00000023427) #11	Hdlbp (ENSRNOG00000031479) #12	Septin2 (ENSRNOG00000017952) #13	LOC100362040 (ENSRNOG00000030738)	Farp2 (ENSRNOG00000018051) #14	Stk25 (ENSRNOG00000018181) #15	Bok (ENSRNOG00000018214) #16	Thap4 (ENSRNOG00000018351) #17	AC109427.1 (ENSRNOG00000056259)	Atg4b (ENSRNOG00000018403) #18	Dtymk (ENSRNOG00000018904) #19	Ing5 (ENSRNOG00000018988) #21	D2hgdh (ENSRNOG00000019012) #22	Gal3st2c (ENSRNOG00000070509)	Neu4 (ENSRNOG00000019031) #25	Pdcd1 (ENSRNOG00000019043) #26	Chchd2l3 (ENSRNOG00000051180)	Fam174a (ENSRNOG00000019087) #27	ENSRNOG00000062997	St8sia4 (ENSRNOG00000019128) #28	Slco4c1 (ENSRNOG00000022711) #29	Slco6b1 (ENSRNOG00000019252) ##29	AABR07068417.1 (ENSRNOG00000025797)	Slco6c1 (ENSRNOG00000013792) ##29	Slco6d1 (ENSRNOG00000031146) ##29	Pam (ENSRNOG00000033280) #31	Gin1 (ENSRNOG00000011962) #32	Ppip5k2 (ENSRNOG00000011613)
Upper Galilee mountains blind mole rat	MODERN SPECIES	634	Crocc2 (ENSNGAG00000021519)	Sned1 (ENSNGAG00000023743) #7	Mterf4 (ENSNGAG00000023724) #8	Pask (ENSNGAG00000007549) #9	ENSNGAG00000017337 #10	Ano7 (ENSNGAG00000022445) #11	Hdlbp (ENSNGAG00000014873) #12	ENSNGAG00000022412 #13	Farp2 (ENSNGAG00000004760) #14	Stk25 (ENSNGAG00000001501) #15	Bok (ENSNGAG00000023762) #16	Thap4 (ENSNGAG00000024010) #17	Atg4b (ENSNGAG00000018585) #18	Dtymk (ENSNGAG00000021440) #19	Ing5 (ENSNGAG00000023305) #21	D2hgdh (ENSNGAG00000023831) #22	Neu4 (ENSNGAG00000017190) #25	Pdcd1 (ENSNGAG00000019405) #26
Lesser Egyptian jerboa	MODERN SPECIES	146	Crocc2 (ENSJJAG00000005843)	Sned1 (ENSJJAG00000012102) #7	Mterf4 (ENSJJAG00000000477) #8	Pask (ENSJJAG00000020114) #9	Ppp1r7 (ENSJJAG00000018768)	Hdlbp (ENSJJAG00000003596) #12	ENSJJAG00000019868 #13	Farp2 (ENSJJAG00000011289) #14	Stk25 (ENSJJAG00000000845) #15	Bok (ENSJJAG00000022455) #16	Thap4 (ENSJJAG00000022829) #17	ENSJJAG00000019840 #18	ENSJJAG00000020306 #18	Dtymk (ENSJJAG00000016941) #19	Ing5 (ENSJJAG00000016649) #21	D2hgdh (ENSJJAG00000009431) #22	Neu4 (ENSJJAG00000003148) #25
Kangaroo rat	MODERN SPECIES	492	Mterf4 (ENSDORG00000028393) #8	Pask (ENSDORG00000004572) #9	Ppp1r7 (ENSDORG00000029280)	ENSDORG00000011305	ENSDORG00000028840 #12	ENSDORG00000000106 #13	ENSDORG00000026265 #14	Stk25 (ENSDORG00000000110) #15	Bok (ENSDORG00000027572) #16	ENSDORG00000023457	Thap4 (ENSDORG00000027598) #17	ENSDORG00000027774 #18	ENSDORG00000016601 #18	Dtymk (ENSDORG00000016603) #19	Ing5 (ENSDORG00000024121) #21	D2hgdh (ENSDORG00000004814) #22	ENSDORG00000015026 #25	Pdcd1 (ENSDORG00000029674) #26	ENSDORG00000004666
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Naked mole-rat female	MODERN SPECIES	30	SNED1 (ENSHGLG00000003686) #7	MTERF4 (ENSHGLG00000003898) #8	PASK (ENSHGLG00000004004) #9	PPP1R7 (ENSHGLG00000004117) #10	HDLBP (ENSHGLG00000004910) #12	ENSHGLG00000005291 #13	FARP2 (ENSHGLG00000015024) #14	ENSHGLG00000042172	ENSHGLG00000014130	STK25 (ENSHGLG00000015089) #15	BOK (ENSHGLG00000015101) #16	THAP4 (ENSHGLG00000015125) #17	ATG4B (ENSHGLG00000018630) #18	DTYMK (ENSHGLG00000018717) #19	ING5 (ENSHGLG00000037490) #21	D2HGDH (ENSHGLG00000003119) #22	GAL3ST2 (ENSHGLG00000003311)	NEU4 (ENSHGLG00000003691) #25	PDCD1 (ENSHGLG00000032677) #26	ENSHGLG00000004109	ENSHGLG00000038816	ENSHGLG00000000610	ENSHGLG00000041212	TSPYL4 (ENSHGLG00000036673)	DSE (ENSHGLG00000041966)	CALHM6 (ENSHGLG00000033792)	TRAPPC3L (ENSHGLG00000002142)	CALHM5 (ENSHGLG00000035655)	CALHM4 (ENSHGLG00000002679)	ENSHGLG00000002331	ENSHGLG00000019728
Hystricomorpha_a	ANCESTRAL SPECIES	32	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26
Guinea pig	MODERN SPECIES	13	SNED1 (ENSCPOG00000006265) #7	MTERF4 (ENSCPOG00000025700) #8	PASK (ENSCPOG00000006277) #9	PPP1R7 (ENSCPOG00000006285) #10	HDLBP (ENSCPOG00000006297) #12	ENSCPOG00000013687 #13	ENSCPOG00000038694	FARP2 (ENSCPOG00000013335) #14	STK25 (ENSCPOG00000022798) #15	ENSCPOG00000025899	BOK (ENSCPOG00000030494) #16	THAP4 (ENSCPOG00000022107) #17	ATG4B (ENSCPOG00000000135) #18	DTYMK (ENSCPOG00000023727) #19	ING5 (ENSCPOG00000038093) #21	D2HGDH (ENSCPOG00000000007) #22	ENSCPOG00000005952	ENSCPOG00000002229	NEU4 (ENSCPOG00000007330) #25	PDCD1 (ENSCPOG00000037292) #26	ENSCPOG00000038878	ENSCPOG00000034749	ENSCPOG00000024854	ENSCPOG00000001586	ENSCPOG00000011923	ENSCPOG00000025453	ENSCPOG00000013424	OR11H4 (ENSCPOG00000011891)	ENSCPOG00000007078	PARP2 (ENSCPOG00000022667)	CCNB1IP1 (ENSCPOG00000009014)
Hystricomorpha_b	ANCESTRAL SPECIES	28	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098.r #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26
Degu	MODERN SPECIES	130	CROCC2 (ENSODEG00000013957)	SNED1 (ENSODEG00000009052) #7	MTERF4 (ENSODEG00000010009) #8	PASK (ENSODEG00000011073) #9	ENSODEG00000011577	ENSODEG00000012313 #12	ENSODEG00000010316 #13	ENSODEG00000019687	FARP2 (ENSODEG00000010817) #14	STK25 (ENSODEG00000010648) #15	BOK (ENSODEG00000011482) #16	THAP4 (ENSODEG00000010347) #17	ENSODEG00000009790 #18	DTYMK (ENSODEG00000010346) #19	ENSODEG00000011084 #21	D2HGDH (ENSODEG00000010827) #22	GAL3ST2 (ENSODEG00000009766)	NEU4 (ENSODEG00000012075) #25	PDCD1 (ENSODEG00000011912) #26
Long-tailed chinchilla	MODERN SPECIES	249	CROCC2 (ENSCLAG00000002724)	SNED1 (ENSCLAG00000002607) #7	MTERF4 (ENSCLAG00000002565) #8	PASK (ENSCLAG00000002519) #9	ENSCLAG00000002485	HDLBP (ENSCLAG00000002365) #12	ENSCLAG00000002255 #13	FARP2 (ENSCLAG00000002135) #14	STK25 (ENSCLAG00000002040) #15	BOK (ENSCLAG00000002024) #16	ENSCLAG00000002013	THAP4 (ENSCLAG00000002361) #17	ATG4B (ENSCLAG00000002262) #18	DTYMK (ENSCLAG00000002150) #19	ING5 (ENSCLAG00000002116) #21	D2HGDH (ENSCLAG00000001990) #22	GAL3ST2 (ENSCLAG00000001967)	NEU4 (ENSCLAG00000001894) #25	PDCD1 (ENSCLAG00000001882) #26
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Eurasian red squirrel	MODERN SPECIES	12	SNED1 (ENSSVLG00005010615) #7	MTERF4 (ENSSVLG00005010874) #8	ENSSVLG00005010962 #9	ENSSVLG00005011084	ENSSVLG00005011132	HDLBP (ENSSVLG00005011227) #12	ENSSVLG00005011546 #13	FARP2 (ENSSVLG00005011791) #14	STK25 (ENSSVLG00005011880) #15	BOK (ENSSVLG00005012052) #16	THAP4 (ENSSVLG00005012097) #17	ENSSVLG00005012212	ATG4B (ENSSVLG00005012261) #18	DTYMK (ENSSVLG00005012417) #19	ING5 (ENSSVLG00005012450) #21	D2HGDH (ENSSVLG00005012513) #22	GAL3ST2 (ENSSVLG00005012622)	NEU4 (ENSSVLG00005012671) #25	PDCD1 (ENSSVLG00005012721) #26	ENSSVLG00005012795	PRDM9 (ENSSVLG00005012896)
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00940000165655
Marmotini_b	ANCESTRAL SPECIES	41	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00940000165655
Arctic ground squirrel	MODERN SPECIES	972										BOK (ENSUPAG00010003241) #16	THAP4 (ENSUPAG00010003245) #17	ATG4B (ENSUPAG00010003261) #18	DTYMK (ENSUPAG00010003278) #19	ENSUPAG00010003293	ING5 (ENSUPAG00010003300) #21	D2HGDH (ENSUPAG00010003310) #22
Squirrel	MODERN SPECIES	345	GPR35 (ENSSTOG00000026086)	ENSSTOG00000022231	KIF1A (ENSSTOG00000021868)	AGXT (ENSSTOG00000008004)	MAB21L4 (ENSSTOG00000006007)	SNED1 (ENSSTOG00000031779) #7	ENSSTOG00000016306	HDLBP (ENSSTOG00000013331) #12	SEPTIN2 (ENSSTOG00000013357) #13	FARP2 (ENSSTOG00000022815) #14	STK25 (ENSSTOG00000026742) #15	BOK (ENSSTOG00000028135) #16	THAP4 (ENSSTOG00000015998) #17	ATG4B (ENSSTOG00000014734) #18	ING5 (ENSSTOG00000005977) #21	D2HGDH (ENSSTOG00000023380) #22	PDCD1 (ENSSTOG00000022396) #26	ENSSTOG00000025755
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	8	SNED1 (ENSMMMG00000007168) #7	MTERF4 (ENSMMMG00000007236) #8	ENSMMMG00000007249 #9	ENSMMMG00000007277	ENSMMMG00000007280	HDLBP (ENSMMMG00000007299) #12	SEPTIN2 (ENSMMMG00000007576) #13	ENSMMMG00000007620 #14	ENSMMMG00000007659 #14	STK25 (ENSMMMG00000007681) #15	ENSMMMG00000007706 #15	BOK (ENSMMMG00000007720) #16	THAP4 (ENSMMMG00000007741) #17	ATG4B (ENSMMMG00000007760) #18	DTYMK (ENSMMMG00000007781) #19	D2HGDH (ENSMMMG00000007799) #22	NEU4 (ENSMMMG00000007853) #25	PDCD1 (ENSMMMG00000007868) #26	ENSMMMG00000007882	ENSMMMG00000007896	ENSMMMG00000007913
Alpin marmot	MODERN SPECIES	275																ENSMMMG00000007944 #22
Lagomorpha	ANCESTRAL SPECIES	239										ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Rabbit	MODERN SPECIES	761										ENSOCUG00000021536 #16	THAP4 (ENSOCUG00000011164) #17	ENSOCUG00000032757	ATG4B (ENSOCUG00000021604) #18	DTYMK (ENSOCUG00000005955) #19	ING5 (ENSOCUG00000024916) #21	D2HGDH (ENSOCUG00000022982) #22	GAL3ST2 (ENSOCUG00000004955)	ENSOCUG00000021920 #25	ENSOCUG00000008079 #26	ENSOCUG00000024447
Pika	MODERN SPECIES	3168																ENSOPRG00000015309 #22	GAL3ST2 (ENSOPRG00000015320)
Primates	ANCESTRAL SPECIES	13	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Hominidae	ANCESTRAL SPECIES	17	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Pan	ANCESTRAL SPECIES	12	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Chimpanzee	MODERN SPECIES	15	SNED1 (ENSPTRG00000013115) #7	MTERF4 (ENSPTRG00000013116) #8	PASK (ENSPTRG00000013117) #9	PPP1R7 (ENSPTRG00000013118) #10	ANO7 (ENSPTRG00000013119) #11	HDLBP (ENSPTRG00000013121) #12	ENSPTRG00000048829	SEPTIN2 (ENSPTRG00000023481) #13	FARP2 (ENSPTRG00000013123) #14	STK25 (ENSPTRG00000013125) #15	BOK (ENSPTRG00000041947) #16	THAP4 (ENSPTRG00000013127) #17	ATG4B (ENSPTRG00000013128) #18	DTYMK (ENSPTRG00000013129) #19	ING5 (ENSPTRG00000013130) #21	D2HGDH (ENSPTRG00000013131) #22	GAL3ST2 (ENSPTRG00000028939)	NEU4 (ENSPTRG00000052792) #25	PDCD1 (ENSPTRG00000051175) #26	RTP5 (ENSPTRG00000050003)	FAM240C (ENSPTRG00000048180)
Bonobo	MODERN SPECIES	15	MTERF4 (ENSPPAG00000041007) #8	PASK (ENSPPAG00000035044) #9	PPP1R7 (ENSPPAG00000040077) #10	ANO7 (ENSPPAG00000043317) #11	HDLBP (ENSPPAG00000023318) #12	ENSPPAG00000038175	SEPTIN2 (ENSPPAG00000034127) #13	FARP2 (ENSPPAG00000041862) #14	STK25 (ENSPPAG00000025391) #15	BOK (ENSPPAG00000043219) #16	THAP4 (ENSPPAG00000031801) #17	ATG4B (ENSPPAG00000035793) #18	DTYMK (ENSPPAG00000040798) #19	ENSPPAG00000014840 #21	ENSPPAG00000028175	D2HGDH (ENSPPAG00000000643) #22	GAL3ST2 (ENSPPAG00000031227)
Human	MODERN SPECIES	11	CROCC2 (ENSG00000226321)	SNED1 (ENSG00000162804) #7	MTERF4 (ENSG00000122085) #8	PASK (ENSG00000115687) #9	PPP1R7 (ENSG00000115685) #10	ANO7 (ENSG00000146205) #11	HDLBP (ENSG00000115677) #12	SEPTIN2 (ENSG00000168385) #13	FARP2 (ENSG00000006607) #14	STK25 (ENSG00000115694) #15	BOK (ENSG00000176720) #16	THAP4 (ENSG00000176946) #17	ATG4B (ENSG00000168397) #18	DTYMK (ENSG00000168393) #19	ING5 (ENSG00000168395) #21	D2HGDH (ENSG00000180902) #22	GAL3ST2 (ENSG00000154252)	NEU4 (ENSG00000204099) #25	PDCD1 (ENSG00000188389) #26	RTP5 (ENSG00000188011)	FAM240C (ENSG00000216921)
Gorilla	MODERN SPECIES	15	CROCC2 (ENSGGOG00000041336)	SNED1 (ENSGGOG00000012750) #7	MTERF4 (ENSGGOG00000036917) #8	PASK (ENSGGOG00000012790) #9	PPP1R7 (ENSGGOG00000012805) #10	ANO7 (ENSGGOG00000004380) #11	HDLBP (ENSGGOG00000004392) #12	SEPTIN2 (ENSGGOG00000004597) #13	FARP2 (ENSGGOG00000004259) #14	ENSGGOG00000004267 #15	BOK (ENSGGOG00000036914) #16	ENSGGOG00000015684 #17	ATG4B (ENSGGOG00000001208) #18	DTYMK (ENSGGOG00000001209) #19	ENSGGOG00000000093 #21	D2HGDH (ENSGGOG00000014288) #22	GAL3ST2 (ENSGGOG00000014294)	NEU4 (ENSGGOG00000014302) #25	PDCD1 (ENSGGOG00000014312) #26	RTP5 (ENSGGOG00000016451)	FAM240C (ENSGGOG00000016303)
Orangutan	MODERN SPECIES	15	CROCC2 (ENSPPYG00000036734)	SNED1 (ENSPPYG00000013346) #7	MTERF4 (ENSPPYG00000013347) #8	PASK (ENSPPYG00000013348) #9	PPP1R7 (ENSPPYG00000013349) #10	ANO7 (ENSPPYG00000013350) #11	HDLBP (ENSPPYG00000013351) #12	SEPTIN2 (ENSPPYG00000013353) #13	FARP2 (ENSPPYG00000013354) #14	STK25 (ENSPPYG00000025879) #15	BOK (ENSPPYG00000013355) #16	THAP4 (ENSPPYG00000013356) #17	ATG4B (ENSPPYG00000013357) #18	DTYMK (ENSPPYG00000013358) #19	ENSPPYG00000037269 #21	D2HGDH (ENSPPYG00000030619) #22	GAL3ST2 (ENSPPYG00000013359)	NEU4 (ENSPPYG00000013369) #25	PDCD1 (ENSPPYG00000034037) #26	RTP5 (ENSPPYG00000013362)	ENSPPYG00000040582	FAM240C (ENSPPYG00000039376)	ENSPPYG00000036844	ENSPPYG00000013363
Gibbon	MODERN SPECIES	14	CROCC2 (ENSNLEG00000029188)	SNED1 (ENSNLEG00000013708) #7	MTERF4 (ENSNLEG00000013727) #8	PASK (ENSNLEG00000013731) #9	PPP1R7 (ENSNLEG00000013766) #10	ANO7 (ENSNLEG00000013806) #11	HDLBP (ENSNLEG00000013818) #12	SEPTIN2 (ENSNLEG00000013873) #13	FARP2 (ENSNLEG00000013956) #14	STK25 (ENSNLEG00000013968) #15	BOK (ENSNLEG00000007762) #16	THAP4 (ENSNLEG00000007765) #17	ATG4B (ENSNLEG00000007770) #18	ENSNLEG00000007771 #19	ENSNLEG00000035403 #21	D2HGDH (ENSNLEG00000007775) #22	GAL3ST2 (ENSNLEG00000007778)	PDCD1 (ENSNLEG00000007780) #26
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000054710 #7	ENSMFAG00000001771 #7	MTERF4 (ENSMFAG00000026775) #8	PASK (ENSMFAG00000037737) #9	ENSMFAG00000038150	ANO7 (ENSMFAG00000001859) #11	HDLBP (ENSMFAG00000033641) #12	SEPTIN2 (ENSMFAG00000039700) #13	FARP2 (ENSMFAG00000044112) #14	STK25 (ENSMFAG00000044279) #15	BOK (ENSMFAG00000000539) #16	THAP4 (ENSMFAG00000042330) #17	ATG4B (ENSMFAG00000039952) #18	DTYMK (ENSMFAG00000040279) #19	ING5 (ENSMFAG00000035525) #21	D2HGDH (ENSMFAG00000041453) #22	GAL3ST2 (ENSMFAG00000049116)	NEU4 (ENSMFAG00000001183) #25	RTP5 (ENSMFAG00000062887)	FAM240C (ENSMFAG00000030747)	ENSMFAG00000064509	ENSMFAG00000044087
Rhesus	MODERN SPECIES	3	CROCC2 (ENSMMUG00000041795)	SNED1 (ENSMMUG00000004968) #7	MTERF4 (ENSMMUG00000006835) #8	PASK (ENSMMUG00000016207) #9	PPP1R7 (ENSMMUG00000016209)	ANO7 (ENSMMUG00000001721) #11	HDLBP (ENSMMUG00000004730) #12	SEPTIN2 (ENSMMUG00000004736) #13	FARP2 (ENSMMUG00000001313) #14	STK25 (ENSMMUG00000001314) #15	BOK (ENSMMUG00000056380) #16	THAP4 (ENSMMUG00000005662) #17	ATG4B (ENSMMUG00000008047) #18	DTYMK (ENSMMUG00000008049) #19	ING5 (ENSMMUG00000014102) #21	D2HGDH (ENSMMUG00000018548) #22	GAL3ST2 (ENSMMUG00000016941)	NEU4 (ENSMMUG00000014405) #25	PDCD1 (ENSMMUG00000063159) #26	RTP5 (ENSMMUG00000042630)	FAM240C (ENSMMUG00000062013)	ENSMMUG00000064044	ENSMMUG00000050185	ENSMMUG00000051574
Pig-tailed macaque	MODERN SPECIES	525	SNED1 (ENSMNEG00000042251) #7	MTERF4 (ENSMNEG00000040061) #8	PASK (ENSMNEG00000030367) #9	ENSMNEG00000005914	ANO7 (ENSMNEG00000033411) #11	HDLBP (ENSMNEG00000024260) #12	SEPTIN2 (ENSMNEG00000004313) #13	ENSMNEG00000013427	FARP2 (ENSMNEG00000030159) #14	STK25 (ENSMNEG00000000451) #15	BOK (ENSMNEG00000029533) #16	THAP4 (ENSMNEG00000034774) #17	ATG4B (ENSMNEG00000038244) #18	DTYMK (ENSMNEG00000026091) #19	ING5 (ENSMNEG00000013535) #21	D2HGDH (ENSMNEG00000028062) #22	GAL3ST2 (ENSMNEG00000029038)	NEU4 (ENSMNEG00000042060) #25	PDCD1 (ENSMNEG00000034272) #26	RTP5 (ENSMNEG00000020448)	ENSMNEG00000044888	ENSMNEG00000039681	ENSMNEG00000042257	ENSMNEG00000012191
Cercopithecinae_b	ANCESTRAL SPECIES	60	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Olive baboon	MODERN SPECIES	1	MAB21L4 (ENSPANG00000013759)	SNED1 (ENSPANG00000012985) #7	MTERF4 (ENSPANG00000014465) #8	PASK (ENSPANG00000021941) #9	ENSPANG00000009640	ENSPANG00000046499 #11	HDLBP (ENSPANG00000011832) #12	SEPTIN2 (ENSPANG00000007917) #13	FARP2 (ENSPANG00000019972) #14	STK25 (ENSPANG00000010069) #15	BOK (ENSPANG00000034368) #16	THAP4 (ENSPANG00000020992) #17	ATG4B (ENSPANG00000009064) #18	DTYMK (ENSPANG00000011079) #19	ING5 (ENSPANG00000023377) #21	D2HGDH (ENSPANG00000013755) #22	GAL3ST2 (ENSPANG00000009063)	NEU4 (ENSPANG00000016562) #25	PDCD1 (ENSPANG00000050115) #26	RTP5 (ENSPANG00000016825)	FAM240C (ENSPANG00000015971)	ENSPANG00000012766
Cercopithecinae_d	ANCESTRAL SPECIES	158	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Sooty mangabey	MODERN SPECIES	107	CROCC2 (ENSCATG00000043230)	SNED1 (ENSCATG00000014152) #7	MTERF4 (ENSCATG00000021725) #8	PASK (ENSCATG00000039320) #9	ENSCATG00000016069	ANO7 (ENSCATG00000037143) #11	HDLBP (ENSCATG00000039363) #12	SEPTIN2 (ENSCATG00000033533) #13	FARP2 (ENSCATG00000032346) #14	STK25 (ENSCATG00000044719) #15	BOK (ENSCATG00000028994) #16	THAP4 (ENSCATG00000029531) #17	ATG4B (ENSCATG00000032957) #18	DTYMK (ENSCATG00000030835) #19	ING5 (ENSCATG00000039625) #21	D2HGDH (ENSCATG00000044824) #22	GAL3ST2 (ENSCATG00000029685)	NEU4 (ENSCATG00000003787) #25	PDCD1 (ENSCATG00000032569) #26	RTP5 (ENSCATG00000038813)	FAM240C (ENSCATG00000045039)	ENSCATG00000036282	ENSCATG00000020706
Drill	MODERN SPECIES	1204	MTERF4 (ENSMLEG00000035945) #8	PASK (ENSMLEG00000042258) #9	ENSMLEG00000033467	ANO7 (ENSMLEG00000004758) #11	HDLBP (ENSMLEG00000042734) #12	SEPTIN2 (ENSMLEG00000043469) #13	ENSMLEG00000019175	ENSMLEG00000000708	FARP2 (ENSMLEG00000031088) #14	STK25 (ENSMLEG00000043898) #15	ENSMLEG00000034287 #16	THAP4 (ENSMLEG00000028926) #17	ATG4B (ENSMLEG00000028526) #18	DTYMK (ENSMLEG00000020102) #19	ING5 (ENSMLEG00000034909) #21	D2HGDH (ENSMLEG00000041989) #22
Vervet Monkey	MODERN SPECIES	1	ENSCSAG00000005915	SNED1 (ENSCSAG00000005891) #7	MTERF4 (ENSCSAG00000005845) #8	PASK (ENSCSAG00000005843) #9	ENSCSAG00000005841	ANO7 (ENSCSAG00000005815) #11	HDLBP (ENSCSAG00000005781) #12	SEPTIN2 (ENSCSAG00000005773) #13	FARP2 (ENSCSAG00000005767) #14	STK25 (ENSCSAG00000005762) #15	BOK (ENSCSAG00000005758) #16	THAP4 (ENSCSAG00000005755) #17	ATG4B (ENSCSAG00000005753) #18	DTYMK (ENSCSAG00000005751) #19	ING5 (ENSCSAG00000005749) #21	D2HGDH (ENSCSAG00000005748) #22	GAL3ST2 (ENSCSAG00000005745)	NEU4 (ENSCSAG00000005741) #25	PDCD1 (ENSCSAG00000005736) #26	RTP5 (ENSCSAG00000005728)	FAM240C (ENSCSAG00000005723)
Rhinopithecus	ANCESTRAL SPECIES	45	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262	ENSGT00940000155308.db.b
Black snub-nosed monkey	MODERN SPECIES	331										STK25 (ENSRBIG00000036175) #15	BOK (ENSRBIG00000038898) #16	THAP4 (ENSRBIG00000033273) #17	ATG4B (ENSRBIG00000036804) #18	DTYMK (ENSRBIG00000029735) #19	ING5 (ENSRBIG00000040219) #21	D2HGDH (ENSRBIG00000041317) #22
Golden snub-nosed monkey	MODERN SPECIES	2006	CROCC2 (ENSRROG00000032397)	SNED1 (ENSRROG00000035035) #7	MTERF4 (ENSRROG00000025293) #8	PASK (ENSRROG00000031156) #9	ENSRROG00000015177	ANO7 (ENSRROG00000035904) #11	HDLBP (ENSRROG00000034263) #12	SEPTIN2 (ENSRROG00000031700) #13	FARP2 (ENSRROG00000030018) #14	STK25 (ENSRROG00000040296) #15	BOK (ENSRROG00000036337) #16	THAP4 (ENSRROG00000045112) #17	ATG4B (ENSRROG00000044313) #18	DTYMK (ENSRROG00000029206) #19	ING5 (ENSRROG00000031632) #21	D2HGDH (ENSRROG00000030612) #22	GAL3ST2 (ENSRROG00000037572)	NEU4 (ENSRROG00000009498) #25	PDCD1 (ENSRROG00000038538) #26	RTP5 (ENSRROG00000016782)	FAM240C (ENSRROG00000045304)	ENSRROG00000035321	ENSRROG00000034706
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a.q #19	ENSGT00940000154030.a.a.r #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00510000055442
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a.r #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00510000055442
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b.a #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059.s #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a.r #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00510000055442
Capuchin	MODERN SPECIES	443	MTERF4 (ENSCCAG00000028780) #8	PASK (ENSCCAG00000026306) #9	PPP1R7 (ENSCCAG00000025668) #10	ANO7 (ENSCCAG00000033209) #11	ENSCCAG00000023361 #12	SEPTIN2 (ENSCCAG00000031252) #13	ENSCCAG00000034359	FARP2 (ENSCCAG00000025705) #14	STK25 (ENSCCAG00000021446) #15	BOK (ENSCCAG00000028486) #16	THAP4 (ENSCCAG00000026683) #17	ATG4B (ENSCCAG00000029373) #18	DTYMK (ENSCCAG00000024318) #19	ENSCCAG00000028409	ING5 (ENSCCAG00000028689) #21	D2HGDH (ENSCCAG00000027548) #22	GAL3ST2 (ENSCCAG00000031743)	NEU4 (ENSCCAG00000037683) #25	PDCD1 (ENSCCAG00000031217) #26	FAM240C (ENSCCAG00000028555)	ENSCCAG00000030963
Bolivian squirrel monkey	MODERN SPECIES	128	CROCC2 (ENSSBOG00000031400)	SNED1 (ENSSBOG00000034978) #7	MTERF4 (ENSSBOG00000025209) #8	PASK (ENSSBOG00000029892) #9	ENSSBOG00000001483 #10	ANO7 (ENSSBOG00000028401) #11	ENSSBOG00000029714 #12	SEPTIN2 (ENSSBOG00000016731) #13	FARP2 (ENSSBOG00000034642) #14	STK25 (ENSSBOG00000027024) #15	BOK (ENSSBOG00000024648) #16	THAP4 (ENSSBOG00000027518) #17	ATG4B (ENSSBOG00000035855) #18	DTYMK (ENSSBOG00000029987) #19	ING5 (ENSSBOG00000034276) #21	D2HGDH (ENSSBOG00000021525) #22	GAL3ST2 (ENSSBOG00000034116)	NEU4 (ENSSBOG00000034595) #25	PDCD1 (ENSSBOG00000030074) #26
Marmoset	MODERN SPECIES	18	CROCC2 (ENSCJAG00000075544)	SNED1 (ENSCJAG00000006352) #7	MTERF4 (ENSCJAG00000006346) #8	PASK (ENSCJAG00000073377) #9	PPP1R7 (ENSCJAG00000006275) #10	ANO7 (ENSCJAG00000064163) #11	HDLBP (ENSCJAG00000006152) #12	ENSCJAG00000006122 #13	FARP2 (ENSCJAG00000006087) #14	STK25 (ENSCJAG00000006066) #15	BOK (ENSCJAG00000000544) #16	THAP4 (ENSCJAG00000000540) #17	ATG4B (ENSCJAG00000011210) #18	DTYMK (ENSCJAG00000011203) #19	ING5 (ENSCJAG00000011198) #21	D2HGDH (ENSCJAG00000011190) #22	GAL3ST2 (ENSCJAG00000075909)	NEU4 (ENSCJAG00000039820) #25	PDCD1 (ENSCJAG00000079209) #26
Mas night monkey	MODERN SPECIES	970											BOK (ENSANAG00000029279) #16	THAP4 (ENSANAG00000021071) #17	ATG4B (ENSANAG00000021141) #18	ENSANAG00000026496 #19	ING5 (ENSANAG00000016624) #21	D2HGDH (ENSANAG00000027855) #22	GAL3ST2 (ENSANAG00000026379)	NEU4 (ENSANAG00000022417) #25	PDCD1 (ENSANAG00000032711) #26	FAM240C (ENSANAG00000022232)
Tarsier	MODERN SPECIES	2268	ENSTSYG00000030035 #9	ENSTSYG00000029105	PPP1R7 (ENSTSYG00000005960) #10	ANO7 (ENSTSYG00000031987) #11	HDLBP (ENSTSYG00000002379) #12	SEPT2 (ENSTSYG00000003579) #13	ENSTSYG00000029361	ENSTSYG00000028402	FARP2 (ENSTSYG00000003599) #14	STK25 (ENSTSYG00000002980) #15	BOK (ENSTSYG00000035854) #16	THAP4 (ENSTSYG00000002410) #17	ATG4B (ENSTSYG00000011099) #18	ENSTSYG00000037438 #19	ING5 (ENSTSYG00000027487) #21	D2HGDH (ENSTSYG00000026014) #22	GAL3ST2 (ENSTSYG00000033878)	NEU4 (ENSTSYG00000027639) #25
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Mouse lemur	MODERN SPECIES	30	MAB21L4 (ENSMICG00000009170)	SNED1 (ENSMICG00000012979) #7	MTERF4 (ENSMICG00000044756) #8	PASK (ENSMICG00000013010) #9	ENSMICG00000017782	HDLBP (ENSMICG00000004569) #12	SEPTIN2 (ENSMICG00000000909) #13	FARP2 (ENSMICG00000012071) #14	STK25 (ENSMICG00000012111) #15	BOK (ENSMICG00000029950) #16	THAP4 (ENSMICG00000016452) #17	ATG4B (ENSMICG00000013114) #18	ENSMICG00000042660	DTYMK (ENSMICG00000013135) #19	ING5 (ENSMICG00000028191) #21	D2HGDH (ENSMICG00000016497) #22	GAL3ST2 (ENSMICG00000016500)	NEU4 (ENSMICG00000034826) #25	PDCD1 (ENSMICG00000032951) #26	RTP5 (ENSMICG00000045438)	ENSMICG00000017470	ENSMICG00000047235	ENSMICG00000000206	ACKR3 (ENSMICG00000008095)	IQCA1 (ENSMICG00000008062)	ASB18 (ENSMICG00000042020)	GBX2 (ENSMICG00000028176)	AGAP1 (ENSMICG00000008660)	SH3BP4 (ENSMICG00000004598)	ENSMICG00000034713	ARL4C (ENSMICG00000017503)
Lemuriformes_a	ANCESTRAL SPECIES	80	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.b #10	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Coquerels sifaka	MODERN SPECIES	879							HDLBP (ENSPCOG00000021622) #12	ENSPCOG00000028482 #13	FARP2 (ENSPCOG00000016260) #14	STK25 (ENSPCOG00000023236) #15	BOK (ENSPCOG00000012929) #16	THAP4 (ENSPCOG00000006649) #17	ATG4B (ENSPCOG00000014315) #18	DTYMK (ENSPCOG00000023194) #19	ING5 (ENSPCOG00000025941) #21	D2HGDH (ENSPCOG00000014775) #22	GAL3ST2 (ENSPCOG00000026156)	NEU4 (ENSPCOG00000019644) #25	PDCD1 (ENSPCOG00000022702) #26	RTP5 (ENSPCOG00000011030)
Greater bamboo lemur	MODERN SPECIES	509											BOK (ENSPSMG00000011852) #16	ENSPSMG00000011840	THAP4 (ENSPSMG00000011826) #17	ENSPSMG00000011794	ING5 (ENSPSMG00000011787) #21	D2HGDH (ENSPSMG00000011774) #22	GAL3ST2 (ENSPSMG00000011753)	NEU4 (ENSPSMG00000011725) #25	PDCD1 (ENSPSMG00000011707) #26
Bushbaby	MODERN SPECIES	472															ING5 (ENSOGAG00000034901) #21	D2HGDH (ENSOGAG00000029812) #22	NEU4 (ENSOGAG00000030618) #25	PDCD1 (ENSOGAG00000006347) #26	ENSOGAG00000025945
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Suina	ANCESTRAL SPECIES	3	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Chacoan peccary	MODERN SPECIES	832	SNED1 (ENSCWAG00000011634) #7	ENSCWAG00000012181 #8	PASK (ENSCWAG00000012224) #9	ENSCWAG00000012726	HDLBP (ENSCWAG00000013005) #12	SEPTIN2 (ENSCWAG00000013123) #13	ENSCWAG00000013218 #14	ENSCWAG00000013251 #14	STK25 (ENSCWAG00000013336) #15	BOK (ENSCWAG00000013639) #16	THAP4 (ENSCWAG00000013684) #17	ENSCWAG00000013803	ATG4B (ENSCWAG00000013856) #18	DTYMK (ENSCWAG00000013982) #19	ING5 (ENSCWAG00000014011) #21	D2HGDH (ENSCWAG00000014047) #22	NEU4 (ENSCWAG00000014312) #25	PDCD1 (ENSCWAG00000014661) #26	ENSCWAG00000014695	PRRX1 (ENSCWAG00000014722)	GORAB (ENSCWAG00000014835)	ENSCWAG00000014952	NTMT2 (ENSCWAG00000014967)	KIFAP3 (ENSCWAG00000015031)	SCYL3 (ENSCWAG00000015287)	C1orf112 (ENSCWAG00000015365)	METTL18 (ENSCWAG00000015401)	ENSCWAG00000015426	SELE (ENSCWAG00000015466)	SELL (ENSCWAG00000015551)	SELP (ENSCWAG00000015691)
Pig	MODERN SPECIES	6	CROCC2 (ENSSSCG00000036261)	SNED1 (ENSSSCG00000016381) #7	MTERF4 (ENSSSCG00000055566) #8	PASK (ENSSSCG00000016378) #9	PPP1R7 (ENSSSCG00000016376) #10	HDLBP (ENSSSCG00000016379) #12	SEPTIN2 (ENSSSCG00000016370) #13	FARP2 (ENSSSCG00000016368) #14	STK25 (ENSSSCG00000016372) #15	BOK (ENSSSCG00000032684) #16	THAP4 (ENSSSCG00000016374) #17	ENSSSCG00000034534	ATG4B (ENSSSCG00000032919) #18	DTYMK (ENSSSCG00000034147) #19	ING5 (ENSSSCG00000032505) #21	D2HGDH (ENSSSCG00000034101) #22	GAL3ST2 (ENSSSCG00000063392)	NEU4 (ENSSSCG00000037090) #25	PDCD1 (ENSSSCG00000037319) #26	ENSSSCG00000032511
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Cetacea	ANCESTRAL SPECIES	14	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00390000013662 #26	ENSGT00510000055442	ENSGT00950000182944.B.a #25
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00510000055442
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00390000008099.hb.a	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00390000013662 #26	ENSGT00510000055442
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000162473	ENSGT00390000008099.hb.a	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00390000013662 #26	ENSGT00510000055442
Narwhal	MODERN SPECIES	302	ENSMMNG00015006704	ENSMMNG00015006583	ENSMMNG00015006538	ANO7 (ENSMMNG00015006498) #11	HDLBP (ENSMMNG00015006421) #12	SEPTIN2 (ENSMMNG00015006371) #13	ENSMMNG00015006327 #14	ENSMMNG00015006295 #14	STK25 (ENSMMNG00015006252) #15	BOK (ENSMMNG00015006222) #16	ENSMMNG00015006208	THAP4 (ENSMMNG00015006183) #17	ATG4B (ENSMMNG00015006126) #18	DTYMK (ENSMMNG00015006094) #19	ING5 (ENSMMNG00015006077) #21	D2HGDH (ENSMMNG00015006051) #22	PDCD1 (ENSMMNG00015005985) #26	FAM240C (ENSMMNG00015005972)	GLI2 (ENSMMNG00015005932)
Beluga whale	MODERN SPECIES	84	PASK (ENSDLEG00000017274) #9	PPP1R7 (ENSDLEG00000017316)	ENSDLEG00000017363	ANO7 (ENSDLEG00000017385) #11	HDLBP (ENSDLEG00000017451) #12	SEPTIN2 (ENSDLEG00000017514) #13	ENSDLEG00000017553 #14	ENSDLEG00000017575 #14	STK25 (ENSDLEG00000017589) #15	BOK (ENSDLEG00000017618) #16	THAP4 (ENSDLEG00000017630) #17	ENSDLEG00000017639	ATG4B (ENSDLEG00000017656) #18	DTYMK (ENSDLEG00000017734) #19	ING5 (ENSDLEG00000017756) #21	D2HGDH (ENSDLEG00000017797) #22	PDCD1 (ENSDLEG00000017819) #26
Vaquita	MODERN SPECIES	18	ENSPSNG00000001072 #8	PASK (ENSPSNG00000001035) #9	ENSPSNG00000000982	ENSPSNG00000000858	HDLBP (ENSPSNG00000000752) #12	SEPTIN2 (ENSPSNG00000000627) #13	ENSPSNG00000000565 #14	ENSPSNG00000000527 #14	STK25 (ENSPSNG00000000486) #15	BOK (ENSPSNG00000000444) #16	ENSPSNG00000000415	THAP4 (ENSPSNG00000000375) #17	ATG4B (ENSPSNG00000000320) #18	DTYMK (ENSPSNG00000000294) #19	ING5 (ENSPSNG00000000271) #21	D2HGDH (ENSPSNG00000000233) #22	PDCD1 (ENSPSNG00000000211) #26	FAM240C (ENSPSNG00000000177)
Dolphin	MODERN SPECIES	2215																D2HGDH (ENSTTRG00000005745) #22	NEU4 (ENSTTRG00000005765) #25
Sperm whale	MODERN SPECIES	11	SNED1 (ENSPCTG00005012449) #7	MTERF4 (ENSPCTG00005013081) #8	PASK (ENSPCTG00005013139) #9	PPP1R7 (ENSPCTG00005013254)	ENSPCTG00005013491	HDLBP (ENSPCTG00005013527) #12	SEPTIN2 (ENSPCTG00005013946) #13	ENSPCTG00005014027 #14	ENSPCTG00005014275 #14	STK25 (ENSPCTG00005014400) #15	BOK (ENSPCTG00005014599) #16	THAP4 (ENSPCTG00005014654) #17	ATG4B (ENSPCTG00005014725) #18	DTYMK (ENSPCTG00005014797) #19	ING5 (ENSPCTG00005014848) #21	D2HGDH (ENSPCTG00005014900) #22	PDCD1 (ENSPCTG00005015179) #26
Blue whale	MODERN SPECIES	18	SNED1 (ENSBMSG00010009944) #7	MTERF4 (ENSBMSG00010009975) #8	ENSBMSG00010009987 #9	ENSBMSG00010010004	ENSBMSG00010010024	HDLBP (ENSBMSG00010010147) #12	SEPTIN2 (ENSBMSG00010010182) #13	ENSBMSG00010010208 #14	ENSBMSG00010010243 #14	STK25 (ENSBMSG00010010267) #15	BOK (ENSBMSG00010010287) #16	THAP4 (ENSBMSG00010010301) #17	ENSBMSG00010010330 #18	DTYMK (ENSBMSG00010010353) #19	ENSBMSG00010010363 #21	D2HGDH (ENSBMSG00010010370) #22	PDCD1 (ENSBMSG00010010423) #26	ENSBMSG00010010435
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Yarkand deer	MODERN SPECIES	12	AGXT (ENSCHYG00000023786)	MAB21L4 (ENSCHYG00000023894)	SNED1 (ENSCHYG00000024133) #7	PASK (ENSCHYG00000024901) #9	ENSCHYG00000025037	HDLBP (ENSCHYG00000025206) #12	ENSCHYG00000005057 #13	FARP2 (ENSCHYG00000005254) #14	STK25 (ENSCHYG00000005741) #15	ENSCHYG00000005861 #16	THAP4 (ENSCHYG00000005901) #17	ENSCHYG00000005951	ATG4B (ENSCHYG00000005974) #18	DTYMK (ENSCHYG00000005997) #19	ING5 (ENSCHYG00000006024) #21	D2HGDH (ENSCHYG00000006084) #22	GAL3ST2 (ENSCHYG00000006191)	NEU4 (ENSCHYG00000006219) #25	PDCD1 (ENSCHYG00000006272) #26	ENSCHYG00000006359	ENSCHYG00000006368
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Siberian musk deer	MODERN SPECIES	1128	MAB21L4 (ENSMMSG00000006074)	SNED1 (ENSMMSG00000006119) #7	ENSMMSG00000006267 #8	PASK (ENSMMSG00000006289) #9	ENSMMSG00000006344	HDLBP (ENSMMSG00000006415) #12	ENSMMSG00000006500 #13	FARP2 (ENSMMSG00000006577) #14	STK25 (ENSMMSG00000006751) #15	BOK (ENSMMSG00000006957) #16	THAP4 (ENSMMSG00000007000) #17	ENSMMSG00000007062	ATG4B (ENSMMSG00000007090) #18	DTYMK (ENSMMSG00000007140) #19	ING5 (ENSMMSG00000007156) #21	D2HGDH (ENSMMSG00000007189) #22	GAL3ST2 (ENSMMSG00000007246)	NEU4 (ENSMMSG00000007270) #25	PDCD1 (ENSMMSG00000007315) #26	ENSMMSG00000007349
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Caprinae	ANCESTRAL SPECIES	2	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00510000055442
Goat	DUPLICATION
Goat	MODERN SPECIES	126																ENSCHIG00000006670 #22	GAL3ST2 (ENSCHIG00000011341)	NEU4 (ENSCHIG00000016718) #25	ENSCHIG00000010033 #26
Goat	MODERN SPECIES	22	MAB21L4 (ENSCHIG00000026979)	SNED1 (ENSCHIG00000021345) #7	MTERF4 (ENSCHIG00000022070) #8	PASK (ENSCHIG00000007156) #9	ENSCHIG00000012347	HDLBP (ENSCHIG00000022364) #12	SEPTIN2 (ENSCHIG00000026614) #13	FARP2 (ENSCHIG00000027255) #14	STK25 (ENSCHIG00000021875) #15	BOK (ENSCHIG00000026381) #16	ENSCHIG00000014554	THAP4 (ENSCHIG00000020478) #17	ATG4B (ENSCHIG00000018105) #18	DTYMK (ENSCHIG00000024323) #19	ING5 (ENSCHIG00000013163) #21	ENSCHIG00000019983 #22	ENSCHIG00000001465	ENSCHIG00000010191
Rambouillet Sheep	MODERN SPECIES		GPR35 (ENSOARG00020000975)	ENSOARG00020000955	KIF1A (ENSOARG00020000824)	AGXT (ENSOARG00020000775)	MAB21L4 (ENSOARG00020000754)	CROCC2 (ENSOARG00020000704)	SNED1 (ENSOARG00020000363) #7	ENSOARG00020000194	HDLBP (ENSOARG00020000111) #12	SEPTIN2 (ENSOARG00020000087) #13	STK25 (ENSOARG00020000074) #15	THAP4 (ENSOARG00020000069) #17	ATG4B (ENSOARG00020000066) #18	DTYMK (ENSOARG00020000065) #19	ING5 (ENSOARG00020000064) #21	D2HGDH (ENSOARG00020000060) #22	GAL3ST2 (ENSOARG00020000059)	NEU4 (ENSOARG00020000055) #25	ENSOARG00020000053 #26	FAM240C (ENSOARG00020000042)
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Bos	ANCESTRAL SPECIES		ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Bos_b	ANCESTRAL SPECIES	45	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000162350.b.b
Hybrid Bos Indicus	MODERN SPECIES	22	AGXT (ENSBIXG00005019708)	MAB21L4 (ENSBIXG00005019680)	CROCC2 (ENSBIXG00005019657)	SNED1 (ENSBIXG00005019613) #7	PASK (ENSBIXG00005019482) #9	ENSBIXG00005019419	HDLBP (ENSBIXG00005019344) #12	SEPTIN2 (ENSBIXG00005019099) #13	FARP2 (ENSBIXG00005018965) #14	STK25 (ENSBIXG00005018864) #15	BOK (ENSBIXG00005018673) #16	THAP4 (ENSBIXG00005018636) #17	ATG4B (ENSBIXG00005018568) #18	DTYMK (ENSBIXG00005003000) #19	ING5 (ENSBIXG00005018529) #21	D2HGDH (ENSBIXG00005018508) #22	GAL3ST2 (ENSBIXG00005018473)	NEU4 (ENSBIXG00005018451) #25	ENSBIXG00005018415 #26	ENSBIXG00005018390	FAM240C (ENSBIXG00005002972)	ENSBIXG00005018344
Cow	MODERN SPECIES	22	MAB21L4 (ENSBTAG00000012374)	CROCC2 (ENSBTAG00000005168)	SNED1 (ENSBTAG00000014132) #7	MTERF4 (ENSBTAG00000000784) #8	PASK (ENSBTAG00000000785) #9	PPP1R7 (ENSBTAG00000000789)	HDLBP (ENSBTAG00000004315) #12	SEPTIN2 (ENSBTAG00000002608) #13	FARP2 (ENSBTAG00000013110) #14	STK25 (ENSBTAG00000009676) #15	BOK (ENSBTAG00000008711) #16	THAP4 (ENSBTAG00000013253) #17	ATG4B (ENSBTAG00000015401) #18	DTYMK (ENSBTAG00000015408) #19	ING5 (ENSBTAG00000009123) #21	D2HGDH (ENSBTAG00000002847) #22	GAL3ST2 (ENSBTAG00000009093)	NEU4 (ENSBTAG00000014833) #25	PDCD1 (ENSBTAG00000011543) #26	RTP5 (ENSBTAG00000040598)	ENSBTAG00000054669	ENSBTAG00000030892
Bos_a	ANCESTRAL SPECIES	65	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Domestic yak	MODERN SPECIES	22	ENSBGRG00000000737	SNED1 (ENSBGRG00000000812) #7	MTERF4 (ENSBGRG00000000960) #8	PASK (ENSBGRG00000001050) #9	PPP1R7 (ENSBGRG00000001494) #10	HDLBP (ENSBGRG00000001532) #12	SEPTIN2 (ENSBGRG00000001628) #13	ENSBGRG00000001659 #14	ENSBGRG00000001709 #14	STK25 (ENSBGRG00000001737) #15	BOK (ENSBGRG00000001796) #16	THAP4 (ENSBGRG00000001809) #17	ATG4B (ENSBGRG00000001839) #18	DTYMK (ENSBGRG00000001869) #19	ING5 (ENSBGRG00000001892) #21	D2HGDH (ENSBGRG00000001912) #22	GAL3ST2 (ENSBGRG00000001946)	NEU4 (ENSBGRG00000001960) #25	PDCD1 (ENSBGRG00000001972) #26	ENSBGRG00000002010	ENSBGRG00000002019	FAM240C (ENSBGRG00000002034)	ENSBGRG00000002046
Wild yak	MODERN SPECIES	1292	MAB21L4 (ENSBMUG00000010834)	ENSBMUG00000010864	SNED1 (ENSBMUG00000011079) #7	MTERF4 (ENSBMUG00000011109) #8	PASK (ENSBMUG00000011286) #9	ENSBMUG00000011436	HDLBP (ENSBMUG00000011512) #12	SEPTIN2 (ENSBMUG00000011562) #13	ENSBMUG00000011602 #14	STK25 (ENSBMUG00000011663) #15	BOK (ENSBMUG00000011678) #16	ENSBMUG00000011686 #17	ATG4B (ENSBMUG00000011703) #18	DTYMK (ENSBMUG00000011726) #19	ING5 (ENSBMUG00000011751) #21	D2HGDH (ENSBMUG00000011772) #22	GAL3ST2 (ENSBMUG00000011800)	PDCD1 (ENSBMUG00000011821) #26	ENSBMUG00000011839	FAM240C (ENSBMUG00000011856)
American bison	MODERN SPECIES	2779				HDLBP (ENSBBBG00000025205) #12	SEPTIN2 (ENSBBBG00000024929) #13	ENSBBBG00000007729 #14	ENSBBBG00000024830 #14	ENSBBBG00000006812 #15	STK25 (ENSBBBG00000008224) #15	BOK (ENSBBBG00000007724) #16	ENSBBBG00000008217 #17	ENSBBBG00000006496	ATG4B (ENSBBBG00000024719) #18	DTYMK (ENSBBBG00000024700) #19	ING5 (ENSBBBG00000006484) #21	D2HGDH (ENSBBBG00000000175) #22
Camelidae	ANCESTRAL SPECIES	87	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Arabian camel	MODERN SPECIES	31	ENSCDRG00005021762	ENSCDRG00005021764 #7	MTERF4 (ENSCDRG00005021768) #8	PASK (ENSCDRG00005021771) #9	ENSCDRG00005021780	HDLBP (ENSCDRG00005021789) #12	SEPTIN2 (ENSCDRG00005021804) #13	ENSCDRG00005021815 #14	ENSCDRG00005000066 #14	STK25 (ENSCDRG00005000090) #15	ENSCDRG00005000190 #16	ENSCDRG00005000232 #17	ATG4B (ENSCDRG00005000273) #18	ENSCDRG00005000350 #19	ING5 (ENSCDRG00005000394) #21	D2HGDH (ENSCDRG00005000420) #22	NEU4 (ENSCDRG00005000455) #25	PDCD1 (ENSCDRG00005000464) #26	ENSCDRG00005000478	FAM240C (ENSCDRG00005000494)
Alpaca	MODERN SPECIES	2293																ENSVPAG00000010863 #22
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.b #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Ursus	ANCESTRAL SPECIES	12	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.b #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Polar bear	MODERN SPECIES	169	CROCC2 (ENSUMAG00000010789)	ENSUMAG00000010780 #7	MTERF4 (ENSUMAG00000010771) #8	PASK (ENSUMAG00000010599) #9	ENSUMAG00000010567	ANO7 (ENSUMAG00000010556) #11	HDLBP (ENSUMAG00000010539) #12	SEPTIN2 (ENSUMAG00000010525) #13	FARP2 (ENSUMAG00000010519) #14	STK25 (ENSUMAG00000010503) #15	ENSUMAG00000010497 #16	ENSUMAG00000010490 #17	ATG4B (ENSUMAG00000010475) #18	DTYMK (ENSUMAG00000010470) #19	ING5 (ENSUMAG00000010455) #21	D2HGDH (ENSUMAG00000010446) #22	ENSUMAG00000010440	PDCD1 (ENSUMAG00000010435) #26	ENSUMAG00000010426	ENSUMAG00000010313
American black bear	MODERN SPECIES	397								FARP2 (ENSUAMG00000008202) #14	STK25 (ENSUAMG00000008482) #15	BOK (ENSUAMG00000008483) #16	ENSUAMG00000008484 #17	ENSUAMG00000008485 #18	ENSUAMG00000008486 #18	DTYMK (ENSUAMG00000008487) #19	ING5 (ENSUAMG00000008488) #21	D2HGDH (ENSUAMG00000008489) #22	GAL3ST2 (ENSUAMG00000008490)	NEU4 (ENSUAMG00000008492) #25	PDCD1 (ENSUAMG00000008493) #26	ENSUAMG00000008494
Giant Panda	MODERN SPECIES	11	AGXT (ENSAMEG00000016700)	MAB21L4 (ENSAMEG00000016697)	CROCC2 (ENSAMEG00000016680)	SNED1 (ENSAMEG00000016675) #7	MTERF4 (ENSAMEG00000016670) #8	PASK (ENSAMEG00000016638) #9	ANO7 (ENSAMEG00000016590) #11	HDLBP (ENSAMEG00000016552) #12	ENSAMEG00000028718 #16	ENSAMEG00000023910 #13	FARP2 (ENSAMEG00000016513) #14	STK25 (ENSAMEG00000016473) #15	ATG4B (ENSAMEG00000016425) #18	ENSAMEG00000016421 #19	ING5 (ENSAMEG00000016412) #21	D2HGDH (ENSAMEG00000016397) #22	GAL3ST2 (ENSAMEG00000023677)	NEU4 (ENSAMEG00000016386) #25	PDCD1 (ENSAMEG00000016373) #26	ENSAMEG00000027207	ENSAMEG00000031114
Mustelinae	ANCESTRAL SPECIES	21	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442	ENSGT00390000015050	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d	ENSGT00940000154714	ENSGT00950000182837.b.b	ENSGT00940000157055
American mink	MODERN SPECIES	275	ENSNVIG00000017789 #7	MTERF4 (ENSNVIG00000017805) #8	PASK (ENSNVIG00000017829) #9	ENSNVIG00000017870	ANO7 (ENSNVIG00000017977) #11	HDLBP (ENSNVIG00000018029) #12	SEPTIN2 (ENSNVIG00000018096) #13	FARP2 (ENSNVIG00000018158) #14	STK25 (ENSNVIG00000018289) #15	BOK (ENSNVIG00000018340) #16	ENSNVIG00000018353 #17	ENSNVIG00000018363 #17	ATG4B (ENSNVIG00000018383) #18	DTYMK (ENSNVIG00000018398) #19	ING5 (ENSNVIG00000018407) #21	D2HGDH (ENSNVIG00000018435) #22	GAL3ST2 (ENSNVIG00000018436)	NEU4 (ENSNVIG00000018459) #25	PDCD1 (ENSNVIG00000018495) #26	CB085 (ENSNVIG00000018518)	FAM240C (ENSNVIG00000018529)	ENSNVIG00000018582	ENSNVIG00000020114	MMADHC (ENSNVIG00000020125)
Ferret	MODERN SPECIES	173	SNED1 (ENSMPUG00000000147) #7	ENSMPUG00000000152	MTERF4 (ENSMPUG00000000155) #8	PASK (ENSMPUG00000000158) #9	ANO7 (ENSMPUG00000000160) #11	HDLBP (ENSMPUG00000000163) #12	SEPTIN2 (ENSMPUG00000000166) #13	FARP2 (ENSMPUG00000000175) #14	STK25 (ENSMPUG00000000176) #15	ENSMPUG00000000178	BOK (ENSMPUG00000000179) #16	THAP4 (ENSMPUG00000000182) #17	ATG4B (ENSMPUG00000000187) #18	DTYMK (ENSMPUG00000000189) #19	ING5 (ENSMPUG00000000190) #21	D2HGDH (ENSMPUG00000000191) #22	GAL3ST2 (ENSMPUG00000000193)	NEU4 (ENSMPUG00000000195) #25	PDCD1 (ENSMPUG00000000197) #26	ENSMPUG00000000200	ENSMPUG00000000203	MMADHC (ENSMPUG00000000323)	ENSMPUG00000000330	RND3 (ENSMPUG00000000331)	RBM43 (ENSMPUG00000000342)	NMI (ENSMPUG00000000344)	TNFAIP6 (ENSMPUG00000000370)	RIF1 (ENSMPUG00000000371)	NEB (ENSMPUG00000000376)	ARL5A (ENSMPUG00000000396)	CACNB4 (ENSMPUG00000000400)
Canidae	ANCESTRAL SPECIES	20	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098.ib.b #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00940000160730 #7	ENSGT00390000000703.h.lb.b	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098.ib.b #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Dog	MODERN SPECIES	17	SNED1 (ENSCAFG00845021016) #7	ENSCAFG00845021865	ENSCAFG00845021901 #8	PASK (ENSCAFG00845021974) #9	PPP1R7 (ENSCAFG00845022243) #10	ANO7 (ENSCAFG00845022518) #11	HDLBP (ENSCAFG00845022763) #12	SEPTIN2 (ENSCAFG00845023027) #13	FARP2 (ENSCAFG00845023180) #14	STK25 (ENSCAFG00845023492) #15	ENSCAFG00845023631 #16	THAP4 (ENSCAFG00845023699) #17	ATG4B (ENSCAFG00845023776) #18	ENSCAFG00845023877 #19	ING5 (ENSCAFG00845024016) #21	D2HGDH (ENSCAFG00845024104) #22	NEU4 (ENSCAFG00845024166) #25	PDCD1 (ENSCAFG00845024308) #26	ENSCAFG00845024371
Dingo	MODERN SPECIES	304	SNED1 (ENSCAFG00020024966) #7	ENSCAFG00020025030	ENSCAFG00020025033 #8	PASK (ENSCAFG00020025046) #9	ENSCAFG00020025077	ANO7 (ENSCAFG00020025079) #11	HDLBP (ENSCAFG00020025089) #12	ENSCAFG00020025094 #13	FARP2 (ENSCAFG00020025110) #14	STK25 (ENSCAFG00020025119) #15	BOK (ENSCAFG00020025122) #16	THAP4 (ENSCAFG00020025129) #17	ATG4B (ENSCAFG00020025174) #18	DTYMK (ENSCAFG00020025418) #19	ING5 (ENSCAFG00020025420) #21	D2HGDH (ENSCAFG00020025422) #22	GAL3ST2 (ENSCAFG00020025423)	NEU4 (ENSCAFG00020025425) #25	PDCD1 (ENSCAFG00020025435) #26	ENSCAFG00020025437
Red fox	MODERN SPECIES	253	AGXT (ENSVVUG00000022967)	MAB21L4 (ENSVVUG00000022960)	ENSVVUG00000022955	SNED1 (ENSVVUG00000022810) #7	PASK (ENSVVUG00000022805) #9	PPP1R7 (ENSVVUG00000022804)	HDLBP (ENSVVUG00000022797) #12	SEPT2 (ENSVVUG00000022793) #13	ENSVVUG00000022790 #14	ENSVVUG00000022785 #14	STK25 (ENSVVUG00000022783) #15	ENSVVUG00000022782 #16	THAP4 (ENSVVUG00000022780) #17	ATG4B (ENSVVUG00000022778) #18	DTYMK (ENSVVUG00000022764) #19	D2HGDH (ENSVVUG00000022757) #22	GAL3ST2 (ENSVVUG00000022752)	ENSVVUG00000022750 #25	ENSVVUG00000022748 #26	RTP5 (ENSVVUG00000022746)
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Panthera	ANCESTRAL SPECIES	9	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Tiger	MODERN SPECIES	218	AGXT (ENSPTIG00000016856)	MTERF4 (ENSPTIG00000012832) #8	PASK (ENSPTIG00000006193) #9	PPP1R7 (ENSPTIG00000020796) #10	ANO7 (ENSPTIG00000017939) #11	HDLBP (ENSPTIG00000009328) #12	SEPTIN2 (ENSPTIG00000004202) #13	FARP2 (ENSPTIG00000018255) #14	STK25 (ENSPTIG00000017429) #15	BOK (ENSPTIG00000016435) #16	ENSPTIG00000015480 #17	ENSPTIG00000015344	ENSPTIG00000015107 #18	DTYMK (ENSPTIG00000014764) #19	ING5 (ENSPTIG00000013252) #21	D2HGDH (ENSPTIG00000012686) #22	NEU4 (ENSPTIG00000012287) #25	ENSPTIG00000011932
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00910000148484	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00900000143170	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
leopard	MODERN SPECIES	12	MAB21L4 (ENSPPRG00000006592)	CROCC2 (ENSPPRG00000008256)	SNED1 (ENSPPRG00000013999) #7	MTERF4 (ENSPPRG00000016102) #8	PASK (ENSPPRG00000001870) #9	PPP1R7 (ENSPPRG00000004627) #10	HDLBP (ENSPPRG00000010215) #12	SEPTIN2 (ENSPPRG00000012154) #13	FARP2 (ENSPPRG00000018957) #14	STK25 (ENSPPRG00000023379) #15	BOK (ENSPPRG00000023173) #16	THAP4 (ENSPPRG00000001382) #17	ATG4B (ENSPPRG00000005113) #18	DTYMK (ENSPPRG00000005334) #19	ING5 (ENSPPRG00000006207) #21	D2HGDH (ENSPPRG00000007202) #22	GAL3ST2 (ENSPPRG00000007375)	NEU4 (ENSPPRG00000008112) #25	PDCD1 (ENSPPRG00000008342) #26	ENSPPRG00000008537	FAM240C (ENSPPRG00000008747)
lion	MODERN SPECIES	8	ENSPLOG00000012697	PPP1R7 (ENSPLOG00000012498) #10	ANO7 (ENSPLOG00000012088) #11	HDLBP (ENSPLOG00000011820) #12	SEPTIN2 (ENSPLOG00000011660) #13	ENSPLOG00000011615	ENSPLOG00000011349 #14	ENSPLOG00000011251 #14	STK25 (ENSPLOG00000011112) #15	BOK (ENSPLOG00000011035) #16	ENSPLOG00000011021	THAP4 (ENSPLOG00000010941) #17	ATG4B (ENSPLOG00000010727) #18	DTYMK (ENSPLOG00000010691) #19	ING5 (ENSPLOG00000010655) #21	D2HGDH (ENSPLOG00000010624) #22	GAL3ST2 (ENSPLOG00000010582)	NEU4 (ENSPLOG00000010542) #25	PDCD1 (ENSPLOG00000010510) #26	ENSPLOG00000010473	FAM240C (ENSPLOG00000010435)
Cat	MODERN SPECIES	239	SNED1 (ENSFCAG00000010450) #7	MTERF4 (ENSFCAG00000010451) #8	PASK (ENSFCAG00000000959) #9	PPP1R7 (ENSFCAG00000010452)	ANO7 (ENSFCAG00000010453) #11	HDLBP (ENSFCAG00000010455) #12	SEPTIN2 (ENSFCAG00000002797) #13	FARP2 (ENSFCAG00000002801) #14	STK25 (ENSFCAG00000002803) #15	BOK (ENSFCAG00000014277) #16	THAP4 (ENSFCAG00000014280) #17	ENSFCAG00000046954	ATG4B (ENSFCAG00000014281) #18	DTYMK (ENSFCAG00000014282) #19	ING5 (ENSFCAG00000043477) #21	D2HGDH (ENSFCAG00000014284) #22	GAL3ST2 (ENSFCAG00000042426)	NEU4 (ENSFCAG00000004992) #25	PDCD1 (ENSFCAG00000014287) #26	RTP5 (ENSFCAG00000048136)	FAM240C (ENSFCAG00000042944)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732	ENSGT00510000055442
Greater horseshoe bat	MODERN SPECIES	26	MAB21L4 (ENSRFEG00010001650)	SNED1 (ENSRFEG00010001292) #7	MTERF4 (ENSRFEG00010001122) #8	PASK (ENSRFEG00010001084) #9	ENSRFEG00010001029	ANO7 (ENSRFEG00010001001) #11	ENSRFEG00010000976 #12	SEPTIN2 (ENSRFEG00010000923) #13	FARP2 (ENSRFEG00010000873) #14	STK25 (ENSRFEG00010000825) #15	BOK (ENSRFEG00010000801) #16	THAP4 (ENSRFEG00010000777) #17	ATG4B (ENSRFEG00010000748) #18	DTYMK (ENSRFEG00010000727) #19	ING5 (ENSRFEG00010000702) #21	D2HGDH (ENSRFEG00010000683) #22	GAL3ST2 (ENSRFEG00010000668)	NEU4 (ENSRFEG00010000653) #25	PDCD1 (ENSRFEG00010000631) #26	ENSRFEG00010000618	FAM240C (ENSRFEG00010000608)
Microbat	MODERN SPECIES	942	SNED1 (ENSMLUG00000012911) #7	MTERF4 (ENSMLUG00000005579) #8	PASK (ENSMLUG00000005589) #9	ENSMLUG00000005606	ANO7 (ENSMLUG00000005611) #11	HDLBP (ENSMLUG00000005628) #12	SEPTIN2 (ENSMLUG00000007108) #13	FARP2 (ENSMLUG00000007123) #14	ENSMLUG00000022825	STK25 (ENSMLUG00000007158) #15	BOK (ENSMLUG00000028632) #16	THAP4 (ENSMLUG00000007192) #17	ATG4B (ENSMLUG00000028269) #18	DTYMK (ENSMLUG00000028996) #19	ING5 (ENSMLUG00000029235) #21	D2HGDH (ENSMLUG00000027975) #22	GAL3ST2 (ENSMLUG00000003372)	NEU4 (ENSMLUG00000003374) #25	PDCD1 (ENSMLUG00000009623) #26	ENSMLUG00000009638	NUP35 (ENSMLUG00000013154)	DUSP19 (ENSMLUG00000013149)	NCKAP1 (ENSMLUG00000011345)	ENSMLUG00000030095	ENSMLUG00000027215	DNAJC10 (ENSMLUG00000000680)	PDE1A (ENSMLUG00000009939)	ENSMLUG00000009929	ITPRID2 (ENSMLUG00000011724)	NEUROD1 (ENSMLUG00000025259)	ENSMLUG00000014227
Megabat	MODERN SPECIES	2095													ATG4B (ENSPVAG00000007021) #18	DTYMK (ENSPVAG00000007023) #19	ING5 (ENSPVAG00000007024) #21	D2HGDH (ENSPVAG00000007025) #22
Equus	ANCESTRAL SPECIES	15	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000162473	ENSGT00940000158551.k.a #11	ENSGT00900000141059.f #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000163732
Horse	MODERN SPECIES	27	MAB21L4 (ENSECAG00000023443)	CROCC2 (ENSECAG00000023710)	SNED1 (ENSECAG00000024612) #7	MTERF4 (ENSECAG00000011622) #8	PASK (ENSECAG00000011785) #9	PPP1R7 (ENSECAG00000017246) #11	HDLBP (ENSECAG00000012829) #12	SEPTIN2 (ENSECAG00000017553) #13	FARP2 (ENSECAG00000008144) #14	STK25 (ENSECAG00000017650) #15	BOK (ENSECAG00000000238) #16	THAP4 (ENSECAG00000000252) #17	ATG4B (ENSECAG00000006659) #18	ENSECAG00000047800 #19	ING5 (ENSECAG00000014401) #21	D2HGDH (ENSECAG00000018063) #22	GAL3ST2 (ENSECAG00000021338)	NEU4 (ENSECAG00000021892) #25	PDCD1 (ENSECAG00000023275) #26	ENSECAG00000037242	ENSECAG00000033624	ENSECAG00000058925	ENSECAG00000041546	USP18 (ENSECAG00000000284)	TUBA8 (ENSECAG00000013982)	PEX26 (ENSECAG00000014438)	MICAL3 (ENSECAG00000004993)	BID (ENSECAG00000006592)	BCL2L13 (ENSECAG00000010335)	ATP6V1E1 (ENSECAG00000016487)	SLC25A18 (ENSECAG00000008033)
Donkey	MODERN SPECIES	10	SNED1 (ENSEASG00005008171) #7	MTERF4 (ENSEASG00005008185) #8	ENSEASG00005037592 #9	ENSEASG00005008227	ENSEASG00005025357 #11	ENSEASG00005008231 #11	HDLBP (ENSEASG00005008249) #12	SEPTIN2 (ENSEASG00005008254) #13	FARP2 (ENSEASG00005008264) #14	STK25 (ENSEASG00005008279) #15	BOK (ENSEASG00005008290) #16	THAP4 (ENSEASG00005008293) #17	ATG4B (ENSEASG00005008298) #18	ENSEASG00005008301 #19	ING5 (ENSEASG00005008302) #21	D2HGDH (ENSEASG00005008304) #22	GAL3ST2 (ENSEASG00005023877)	NEU4 (ENSEASG00005027161) #25	PDCD1 (ENSEASG00005008310) #26	ENSEASG00005038563	ENSEASG00005008365	ENSEASG00005026883	ENSEASG00005034945	ENSEASG00005031656	ENSEASG00005029923
Eulipotyphla	ANCESTRAL SPECIES	2285																ENSGT00550000075086 #22	ENSGT00950000182923.B.a
Hedgehog	MODERN SPECIES	7351																ENSEEUG00000012314 #22
Common shrew	MODERN SPECIES	5761																ENSSARG00000007396 #22	ENSSARG00000007446
Atlantogenata	ANCESTRAL SPECIES																	ENSGT00550000075086 #22
Afrotheria	ANCESTRAL SPECIES																	ENSGT00550000075086 #22
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00550000075086 #22
Hyrax	MODERN SPECIES	6065																ENSPCAG00000010584 #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162	ENSGT00390000006126
Opossum	MODERN SPECIES	6	CLDN1 (ENSMODG00000047456)	CLDN16 (ENSMODG00000015088)	IL1RAP (ENSMODG00000015095)	ENSMODG00000050076	OSTN (ENSMODG00000015103)	CCDC50 (ENSMODG00000015112)	FGF12 (ENSMODG00000015116)	ENSMODG00000015119	PLAAT1 (ENSMODG00000015123)	ATP13A4 (ENSMODG00000015137)	OPA1 (ENSMODG00000015156)	ATG4B (ENSMODG00000008658) #18	ENSMODG00000039725 #19	ENSMODG00000008649 #19	ING5 (ENSMODG00000008639) #21	D2HGDH (ENSMODG00000008616) #22	GAL3ST2 (ENSMODG00000008603)	NEU4 (ENSMODG00000037347) #25	ENSMODG00000029268 #26	ENSMODG00000008563	RTP1 (ENSMODG00000008542)	ENSMODG00000043766	MASP1 (ENSMODG00000008535)	SST (ENSMODG00000008503)	ENSMODG00000045616	ENSMODG00000042478	ENSMODG00000016079 #17	BOK (ENSMODG00000016075) #16	FARP2 (ENSMODG00000016044) #14	SEPTIN2 (ENSMODG00000016041) #13	HDLBP (ENSMODG00000016033) #12
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00940000158551.k.a #11	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000162454	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000162454	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689	ENSGT00940000160730 #7	ENSGT00460000041648 #8	ENSGT00940000159035 #9	ENSGT00940000158551.k.b #10	ENSGT00900000141059 #12	ENSGT00940000155098 #13	ENSGT00940000158642 #14	ENSGT00940000153476.a #15	ENSGT01090000260100.B #16	ENSGT00940000158447 #17	ENSGT00530000063000.a.b.b #18	ENSGT00940000154030.a.a #19	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a #25	ENSGT00390000013662 #26	ENSGT00940000162454	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162
koala	MODERN SPECIES	33	MAB21L4 (ENSPCIG00000027355)	ENSPCIG00000027354	SNED1 (ENSPCIG00000015443) #7	ENSPCIG00000015434 #8	ENSPCIG00000015415 #9	PPP1R7 (ENSPCIG00000015402) #10	HDLBP (ENSPCIG00000015375) #12	SEPTIN2 (ENSPCIG00000005866) #13	FARP2 (ENSPCIG00000005873) #14	STK25 (ENSPCIG00000005881) #15	BOK (ENSPCIG00000016583) #16	THAP4 (ENSPCIG00000016578) #17	ATG4B (ENSPCIG00000016576) #18	DTYMK (ENSPCIG00000016574) #19	ING5 (ENSPCIG00000016570) #21	D2HGDH (ENSPCIG00000016567) #22	GAL3ST2 (ENSPCIG00000032948)	ENSPCIG00000031792 #25	ENSPCIG00000025273 #26	ENSPCIG00000025271	MROH2A (ENSPCIG00000025265)	RTP1 (ENSPCIG00000025264)	ENSPCIG00000025263	SST (ENSPCIG00000025262)	BCL6 (ENSPCIG00000025261)	ENSPCIG00000025259	LPP (ENSPCIG00000037471)	TPRG1 (ENSPCIG00000003993)	TP63 (ENSPCIG00000025324)
Common wonbat	MODERN SPECIES	1046	SNED1 (ENSVURG00010020936) #7	ENSVURG00010021080 #8	ENSVURG00010021082 #9	PPP1R7 (ENSVURG00010021089) #10	HDLBP (ENSVURG00010021098) #12	SEPTIN2 (ENSVURG00010021113) #13	FARP2 (ENSVURG00010021133) #14	ENSVURG00010021155	ENSVURG00010021157	STK25 (ENSVURG00010021165) #15	BOK (ENSVURG00010021188) #16	THAP4 (ENSVURG00010021195) #17	ATG4B (ENSVURG00010021203) #18	DTYMK (ENSVURG00010021210) #19	ING5 (ENSVURG00010021216) #21	D2HGDH (ENSVURG00010021224) #22	ENSVURG00010021230	GAL3ST2 (ENSVURG00010021234)	NEU4 (ENSVURG00010021251) #25	ENSVURG00010021355 #26	MROH2A (ENSVURG00010021359)	RTP1 (ENSVURG00010021374)	ENSVURG00010021379
Wallaby	MODERN SPECIES	8741																D2HGDH (ENSMEUG00000012733) #22
Tasmanian devil	MODERN SPECIES	2	MAB21L4 (ENSSHAG00000009675)	ENSSHAG00000010228	SNED1 (ENSSHAG00000011201) #7	ENSSHAG00000011570 #9	PPP1R7 (ENSSHAG00000011977) #10	ANO7 (ENSSHAG00000012152) #11	HDLBP (ENSSHAG00000012422) #12	SEPTIN2 (ENSSHAG00000012877) #13	FARP2 (ENSSHAG00000013204) #14	STK25 (ENSSHAG00000013625) #15	BOK (ENSSHAG00000021893) #16	THAP4 (ENSSHAG00000002590) #17	ENSSHAG00000025437 #19	ATG4B (ENSSHAG00000025606) #18	ING5 (ENSSHAG00000021102) #21	D2HGDH (ENSSHAG00000016109) #22	GAL3ST2 (ENSSHAG00000015929)	ENSSHAG00000015765 #25	ENSSHAG00000022224 #26	ENSSHAG00000015591	ENSSHAG00000015438	ENSSHAG00000015412	MASP1 (ENSSHAG00000015135)	SST (ENSSHAG00000028585)	ENSSHAG00000029604	LPP (ENSSHAG00000022243)	TPRG1 (ENSSHAG00000011287)	TP63 (ENSSHAG00000007507)	P3H2 (ENSSHAG00000006714)	CLDN1 (ENSSHAG00000001180)	CLDN16 (ENSSHAG00000028888)
Platypus	MODERN SPECIES	18	ENSOANG00000015608	SNED1 (ENSOANG00000015610) #7	ENSOANG00000037263 #8	ENSOANG00000015612 #9	PPP1R7 (ENSOANG00000011761) #10	ANO7 (ENSOANG00000011760) #11	HDLBP (ENSOANG00000011759) #12	SEPTIN2 (ENSOANG00000011758) #13	FARP2 (ENSOANG00000011757) #14	STK25 (ENSOANG00000011756) #15	BOK (ENSOANG00000005633) #16	THAP4 (ENSOANG00000009842) #17	ATG4B (ENSOANG00000008758) #18	DTYMK (ENSOANG00000008759) #19	ING5 (ENSOANG00000049910) #21	D2HGDH (ENSOANG00000000857) #22	ENSOANG00000002250	ENSOANG00000000858	ENSOANG00000000861 #25	ENSOANG00000031433 #26	MROH2A (ENSOANG00000000863)	RTP1 (ENSOANG00000000868)	MASP1 (ENSOANG00000000869)	SST (ENSOANG00000000871)	BCL6 (ENSOANG00000000872)	LPP (ENSOANG00000013793)	TPRG1 (ENSOANG00000013794)	TP63 (ENSOANG00000013795)	P3H2 (ENSOANG00000013797)	CLDN1 (ENSOANG00000013798)	CLDN16 (ENSOANG00000004452)