Sarcopterygii	ANCESTRAL SPECIES	339					ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22
Tetrapoda	ANCESTRAL SPECIES	73	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22
Amniota	ANCESTRAL SPECIES	43	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Mammalia	ANCESTRAL SPECIES	7	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162	ENSGT00390000006126
Theria	ANCESTRAL SPECIES	5	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162	ENSGT00390000006126
Eutheria	ANCESTRAL SPECIES	39	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00940000157674
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Primates	ANCESTRAL SPECIES	13	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Gibbon	MODERN SPECIES	14	CROCC2 (ENSNLEG00000029188) #7	SNED1 (ENSNLEG00000013708) #8	MTERF4 (ENSNLEG00000013727) #9	PASK (ENSNLEG00000013731) #10	PPP1R7 (ENSNLEG00000013766) #11	ANO7 (ENSNLEG00000013806) #12	HDLBP (ENSNLEG00000013818) #13	SEPTIN2 (ENSNLEG00000013873) #14	FARP2 (ENSNLEG00000013956) #15	STK25 (ENSNLEG00000013968) #16	BOK (ENSNLEG00000007762) #17	THAP4 (ENSNLEG00000007765) #18	ATG4B (ENSNLEG00000007770) #19	ENSNLEG00000007771 #20	ENSNLEG00000035403 #21	D2HGDH (ENSNLEG00000007775) #22	GAL3ST2 (ENSNLEG00000007778) #23	PDCD1 (ENSNLEG00000007780) #24
Hominidae	ANCESTRAL SPECIES	17	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Pan	ANCESTRAL SPECIES	12	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Chimpanzee	MODERN SPECIES	15	SNED1 (ENSPTRG00000013115) #8	MTERF4 (ENSPTRG00000013116) #9	PASK (ENSPTRG00000013117) #10	PPP1R7 (ENSPTRG00000013118) #11	ANO7 (ENSPTRG00000013119) #12	HDLBP (ENSPTRG00000013121) #13	ENSPTRG00000048829	SEPTIN2 (ENSPTRG00000023481) #14	FARP2 (ENSPTRG00000013123) #15	STK25 (ENSPTRG00000013125) #16	BOK (ENSPTRG00000041947) #17	THAP4 (ENSPTRG00000013127) #18	ATG4B (ENSPTRG00000013128) #19	DTYMK (ENSPTRG00000013129) #20	ING5 (ENSPTRG00000013130) #21	D2HGDH (ENSPTRG00000013131) #22	GAL3ST2 (ENSPTRG00000028939) #23	NEU4 (ENSPTRG00000052792)	PDCD1 (ENSPTRG00000051175) #24	RTP5 (ENSPTRG00000050003)	FAM240C (ENSPTRG00000048180)
Bonobo	MODERN SPECIES	15	MTERF4 (ENSPPAG00000041007) #9	PASK (ENSPPAG00000035044) #10	PPP1R7 (ENSPPAG00000040077) #11	ANO7 (ENSPPAG00000043317) #12	HDLBP (ENSPPAG00000023318) #13	ENSPPAG00000038175	SEPTIN2 (ENSPPAG00000034127) #14	FARP2 (ENSPPAG00000041862) #15	STK25 (ENSPPAG00000025391) #16	BOK (ENSPPAG00000043219) #17	THAP4 (ENSPPAG00000031801) #18	ATG4B (ENSPPAG00000035793) #19	DTYMK (ENSPPAG00000040798) #20	ENSPPAG00000014840 #21	ENSPPAG00000028175	D2HGDH (ENSPPAG00000000643) #22	GAL3ST2 (ENSPPAG00000031227) #23
Human	MODERN SPECIES	11	CROCC2 (ENSG00000226321) #7	SNED1 (ENSG00000162804) #8	MTERF4 (ENSG00000122085) #9	PASK (ENSG00000115687) #10	PPP1R7 (ENSG00000115685) #11	ANO7 (ENSG00000146205) #12	HDLBP (ENSG00000115677) #13	SEPTIN2 (ENSG00000168385) #14	FARP2 (ENSG00000006607) #15	STK25 (ENSG00000115694) #16	BOK (ENSG00000176720) #17	THAP4 (ENSG00000176946) #18	ATG4B (ENSG00000168397) #19	DTYMK (ENSG00000168393) #20	ING5 (ENSG00000168395) #21	D2HGDH (ENSG00000180902) #22	GAL3ST2 (ENSG00000154252) #23	NEU4 (ENSG00000204099)	PDCD1 (ENSG00000188389) #24	RTP5 (ENSG00000188011)	FAM240C (ENSG00000216921)
Gorilla	MODERN SPECIES	15	CROCC2 (ENSGGOG00000041336) #7	SNED1 (ENSGGOG00000012750) #8	MTERF4 (ENSGGOG00000036917) #9	PASK (ENSGGOG00000012790) #10	PPP1R7 (ENSGGOG00000012805) #11	ANO7 (ENSGGOG00000004380) #12	HDLBP (ENSGGOG00000004392) #13	SEPTIN2 (ENSGGOG00000004597) #14	FARP2 (ENSGGOG00000004259) #15	ENSGGOG00000004267 #16	BOK (ENSGGOG00000036914) #17	ENSGGOG00000015684 #18	ATG4B (ENSGGOG00000001208) #19	DTYMK (ENSGGOG00000001209) #20	ENSGGOG00000000093 #21	D2HGDH (ENSGGOG00000014288) #22	GAL3ST2 (ENSGGOG00000014294) #23	NEU4 (ENSGGOG00000014302)	PDCD1 (ENSGGOG00000014312) #24	RTP5 (ENSGGOG00000016451)	FAM240C (ENSGGOG00000016303)
Orangutan	MODERN SPECIES	15	CROCC2 (ENSPPYG00000036734) #7	SNED1 (ENSPPYG00000013346) #8	MTERF4 (ENSPPYG00000013347) #9	PASK (ENSPPYG00000013348) #10	PPP1R7 (ENSPPYG00000013349) #11	ANO7 (ENSPPYG00000013350) #12	HDLBP (ENSPPYG00000013351) #13	SEPTIN2 (ENSPPYG00000013353) #14	FARP2 (ENSPPYG00000013354) #15	STK25 (ENSPPYG00000025879) #16	BOK (ENSPPYG00000013355) #17	THAP4 (ENSPPYG00000013356) #18	ATG4B (ENSPPYG00000013357) #19	DTYMK (ENSPPYG00000013358) #20	ENSPPYG00000037269 #21	D2HGDH (ENSPPYG00000030619) #22	GAL3ST2 (ENSPPYG00000013359) #23	NEU4 (ENSPPYG00000013369)	PDCD1 (ENSPPYG00000034037) #24	RTP5 (ENSPPYG00000013362)	ENSPPYG00000040582	FAM240C (ENSPPYG00000039376)	ENSPPYG00000036844	ENSPPYG00000013363
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000054710 #8	ENSMFAG00000001771 #8	MTERF4 (ENSMFAG00000026775) #9	PASK (ENSMFAG00000037737) #10	ENSMFAG00000038150	ANO7 (ENSMFAG00000001859) #12	HDLBP (ENSMFAG00000033641) #13	SEPTIN2 (ENSMFAG00000039700) #14	FARP2 (ENSMFAG00000044112) #15	STK25 (ENSMFAG00000044279) #16	BOK (ENSMFAG00000000539) #17	THAP4 (ENSMFAG00000042330) #18	ATG4B (ENSMFAG00000039952) #19	DTYMK (ENSMFAG00000040279) #20	ING5 (ENSMFAG00000035525) #21	D2HGDH (ENSMFAG00000041453) #22	GAL3ST2 (ENSMFAG00000049116) #23	NEU4 (ENSMFAG00000001183)	RTP5 (ENSMFAG00000062887)	FAM240C (ENSMFAG00000030747)	ENSMFAG00000064509	ENSMFAG00000044087
Rhesus	MODERN SPECIES	3	CROCC2 (ENSMMUG00000041795) #7	SNED1 (ENSMMUG00000004968) #8	MTERF4 (ENSMMUG00000006835) #9	PASK (ENSMMUG00000016207) #10	PPP1R7 (ENSMMUG00000016209)	ANO7 (ENSMMUG00000001721) #12	HDLBP (ENSMMUG00000004730) #13	SEPTIN2 (ENSMMUG00000004736) #14	FARP2 (ENSMMUG00000001313) #15	STK25 (ENSMMUG00000001314) #16	BOK (ENSMMUG00000056380) #17	THAP4 (ENSMMUG00000005662) #18	ATG4B (ENSMMUG00000008047) #19	DTYMK (ENSMMUG00000008049) #20	ING5 (ENSMMUG00000014102) #21	D2HGDH (ENSMMUG00000018548) #22	GAL3ST2 (ENSMMUG00000016941) #23	NEU4 (ENSMMUG00000014405)	PDCD1 (ENSMMUG00000063159) #24	RTP5 (ENSMMUG00000042630)	FAM240C (ENSMMUG00000062013)	ENSMMUG00000064044	ENSMMUG00000050185	ENSMMUG00000051574
Pig-tailed macaque	MODERN SPECIES	525	SNED1 (ENSMNEG00000042251) #8	MTERF4 (ENSMNEG00000040061) #9	PASK (ENSMNEG00000030367) #10	ENSMNEG00000005914	ANO7 (ENSMNEG00000033411) #12	HDLBP (ENSMNEG00000024260) #13	SEPTIN2 (ENSMNEG00000004313) #14	ENSMNEG00000013427	FARP2 (ENSMNEG00000030159) #15	STK25 (ENSMNEG00000000451) #16	BOK (ENSMNEG00000029533) #17	THAP4 (ENSMNEG00000034774) #18	ATG4B (ENSMNEG00000038244) #19	DTYMK (ENSMNEG00000026091) #20	ING5 (ENSMNEG00000013535) #21	D2HGDH (ENSMNEG00000028062) #22	GAL3ST2 (ENSMNEG00000029038) #23	NEU4 (ENSMNEG00000042060)	PDCD1 (ENSMNEG00000034272) #24	RTP5 (ENSMNEG00000020448)	ENSMNEG00000044888	ENSMNEG00000039681	ENSMNEG00000042257	ENSMNEG00000012191
Cercopithecinae_b	ANCESTRAL SPECIES	60	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Olive baboon	MODERN SPECIES	1	MAB21L4 (ENSPANG00000013759)	SNED1 (ENSPANG00000012985) #8	MTERF4 (ENSPANG00000014465) #9	PASK (ENSPANG00000021941) #10	ENSPANG00000009640	ENSPANG00000046499 #12	HDLBP (ENSPANG00000011832) #13	SEPTIN2 (ENSPANG00000007917) #14	FARP2 (ENSPANG00000019972) #15	STK25 (ENSPANG00000010069) #16	BOK (ENSPANG00000034368) #17	THAP4 (ENSPANG00000020992) #18	ATG4B (ENSPANG00000009064) #19	DTYMK (ENSPANG00000011079) #20	ING5 (ENSPANG00000023377) #21	D2HGDH (ENSPANG00000013755) #22	GAL3ST2 (ENSPANG00000009063) #23	NEU4 (ENSPANG00000016562)	PDCD1 (ENSPANG00000050115) #24	RTP5 (ENSPANG00000016825)	FAM240C (ENSPANG00000015971)	ENSPANG00000012766
Cercopithecinae_d	ANCESTRAL SPECIES	158	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Sooty mangabey	MODERN SPECIES	107	CROCC2 (ENSCATG00000043230) #7	SNED1 (ENSCATG00000014152) #8	MTERF4 (ENSCATG00000021725) #9	PASK (ENSCATG00000039320) #10	ENSCATG00000016069	ANO7 (ENSCATG00000037143) #12	HDLBP (ENSCATG00000039363) #13	SEPTIN2 (ENSCATG00000033533) #14	FARP2 (ENSCATG00000032346) #15	STK25 (ENSCATG00000044719) #16	BOK (ENSCATG00000028994) #17	THAP4 (ENSCATG00000029531) #18	ATG4B (ENSCATG00000032957) #19	DTYMK (ENSCATG00000030835) #20	ING5 (ENSCATG00000039625) #21	D2HGDH (ENSCATG00000044824) #22	GAL3ST2 (ENSCATG00000029685) #23	NEU4 (ENSCATG00000003787)	PDCD1 (ENSCATG00000032569) #24	RTP5 (ENSCATG00000038813)	FAM240C (ENSCATG00000045039)	ENSCATG00000036282	ENSCATG00000020706
Drill	MODERN SPECIES	1204	MTERF4 (ENSMLEG00000035945) #9	PASK (ENSMLEG00000042258) #10	ENSMLEG00000033467	ANO7 (ENSMLEG00000004758) #12	HDLBP (ENSMLEG00000042734) #13	SEPTIN2 (ENSMLEG00000043469) #14	ENSMLEG00000019175	ENSMLEG00000000708	FARP2 (ENSMLEG00000031088) #15	STK25 (ENSMLEG00000043898) #16	ENSMLEG00000034287 #17	THAP4 (ENSMLEG00000028926) #18	ATG4B (ENSMLEG00000028526) #19	DTYMK (ENSMLEG00000020102) #20	ING5 (ENSMLEG00000034909) #21	D2HGDH (ENSMLEG00000041989) #22
Vervet Monkey	MODERN SPECIES	1	ENSCSAG00000005915	SNED1 (ENSCSAG00000005891) #8	MTERF4 (ENSCSAG00000005845) #9	PASK (ENSCSAG00000005843) #10	ENSCSAG00000005841	ANO7 (ENSCSAG00000005815) #12	HDLBP (ENSCSAG00000005781) #13	SEPTIN2 (ENSCSAG00000005773) #14	FARP2 (ENSCSAG00000005767) #15	STK25 (ENSCSAG00000005762) #16	BOK (ENSCSAG00000005758) #17	THAP4 (ENSCSAG00000005755) #18	ATG4B (ENSCSAG00000005753) #19	DTYMK (ENSCSAG00000005751) #20	ING5 (ENSCSAG00000005749) #21	D2HGDH (ENSCSAG00000005748) #22	GAL3ST2 (ENSCSAG00000005745) #23	NEU4 (ENSCSAG00000005741)	PDCD1 (ENSCSAG00000005736) #24	RTP5 (ENSCSAG00000005728)	FAM240C (ENSCSAG00000005723)
Rhinopithecus	ANCESTRAL SPECIES	45	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000164262	ENSGT00940000155308.db.b
Black snub-nosed monkey	MODERN SPECIES	331										STK25 (ENSRBIG00000036175) #16	BOK (ENSRBIG00000038898) #17	THAP4 (ENSRBIG00000033273) #18	ATG4B (ENSRBIG00000036804) #19	DTYMK (ENSRBIG00000029735) #20	ING5 (ENSRBIG00000040219) #21	D2HGDH (ENSRBIG00000041317) #22
Golden snub-nosed monkey	MODERN SPECIES	2006	CROCC2 (ENSRROG00000032397) #7	SNED1 (ENSRROG00000035035) #8	MTERF4 (ENSRROG00000025293) #9	PASK (ENSRROG00000031156) #10	ENSRROG00000015177	ANO7 (ENSRROG00000035904) #12	HDLBP (ENSRROG00000034263) #13	SEPTIN2 (ENSRROG00000031700) #14	FARP2 (ENSRROG00000030018) #15	STK25 (ENSRROG00000040296) #16	BOK (ENSRROG00000036337) #17	THAP4 (ENSRROG00000045112) #18	ATG4B (ENSRROG00000044313) #19	DTYMK (ENSRROG00000029206) #20	ING5 (ENSRROG00000031632) #21	D2HGDH (ENSRROG00000030612) #22	GAL3ST2 (ENSRROG00000037572) #23	NEU4 (ENSRROG00000009498)	PDCD1 (ENSRROG00000038538) #24	RTP5 (ENSRROG00000016782)	FAM240C (ENSRROG00000045304)	ENSRROG00000035321	ENSRROG00000034706
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a.q #20	ENSGT00940000154030.a.a.r #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00510000055442
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a.r #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00510000055442
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b.a #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059.s #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a.r #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00510000055442
Capuchin	MODERN SPECIES	443	MTERF4 (ENSCCAG00000028780) #9	PASK (ENSCCAG00000026306) #10	PPP1R7 (ENSCCAG00000025668) #11	ANO7 (ENSCCAG00000033209) #12	ENSCCAG00000023361 #13	SEPTIN2 (ENSCCAG00000031252) #14	ENSCCAG00000034359	FARP2 (ENSCCAG00000025705) #15	STK25 (ENSCCAG00000021446) #16	BOK (ENSCCAG00000028486) #17	THAP4 (ENSCCAG00000026683) #18	ATG4B (ENSCCAG00000029373) #19	DTYMK (ENSCCAG00000024318) #20	ENSCCAG00000028409	ING5 (ENSCCAG00000028689) #21	D2HGDH (ENSCCAG00000027548) #22	GAL3ST2 (ENSCCAG00000031743) #23	NEU4 (ENSCCAG00000037683)	PDCD1 (ENSCCAG00000031217) #24	FAM240C (ENSCCAG00000028555)	ENSCCAG00000030963
Bolivian squirrel monkey	MODERN SPECIES	128	CROCC2 (ENSSBOG00000031400) #7	SNED1 (ENSSBOG00000034978) #8	MTERF4 (ENSSBOG00000025209) #9	PASK (ENSSBOG00000029892) #10	ENSSBOG00000001483 #11	ANO7 (ENSSBOG00000028401) #12	ENSSBOG00000029714 #13	SEPTIN2 (ENSSBOG00000016731) #14	FARP2 (ENSSBOG00000034642) #15	STK25 (ENSSBOG00000027024) #16	BOK (ENSSBOG00000024648) #17	THAP4 (ENSSBOG00000027518) #18	ATG4B (ENSSBOG00000035855) #19	DTYMK (ENSSBOG00000029987) #20	ING5 (ENSSBOG00000034276) #21	D2HGDH (ENSSBOG00000021525) #22	GAL3ST2 (ENSSBOG00000034116) #23	NEU4 (ENSSBOG00000034595)	PDCD1 (ENSSBOG00000030074) #24
Marmoset	MODERN SPECIES	18	CROCC2 (ENSCJAG00000075544) #7	SNED1 (ENSCJAG00000006352) #8	MTERF4 (ENSCJAG00000006346) #9	PASK (ENSCJAG00000073377) #10	PPP1R7 (ENSCJAG00000006275) #11	ANO7 (ENSCJAG00000064163) #12	HDLBP (ENSCJAG00000006152) #13	ENSCJAG00000006122 #14	FARP2 (ENSCJAG00000006087) #15	STK25 (ENSCJAG00000006066) #16	BOK (ENSCJAG00000000544) #17	THAP4 (ENSCJAG00000000540) #18	ATG4B (ENSCJAG00000011210) #19	DTYMK (ENSCJAG00000011203) #20	ING5 (ENSCJAG00000011198) #21	D2HGDH (ENSCJAG00000011190) #22	GAL3ST2 (ENSCJAG00000075909) #23	NEU4 (ENSCJAG00000039820)	PDCD1 (ENSCJAG00000079209) #24
Mas night monkey	MODERN SPECIES	970											BOK (ENSANAG00000029279) #17	THAP4 (ENSANAG00000021071) #18	ATG4B (ENSANAG00000021141) #19	ENSANAG00000026496 #20	ING5 (ENSANAG00000016624) #21	D2HGDH (ENSANAG00000027855) #22	GAL3ST2 (ENSANAG00000026379) #23	NEU4 (ENSANAG00000022417)	PDCD1 (ENSANAG00000032711) #24	FAM240C (ENSANAG00000022232)
Tarsier	MODERN SPECIES	2268	ENSTSYG00000030035 #10	ENSTSYG00000029105	PPP1R7 (ENSTSYG00000005960) #11	ANO7 (ENSTSYG00000031987) #12	HDLBP (ENSTSYG00000002379) #13	SEPT2 (ENSTSYG00000003579) #14	ENSTSYG00000029361	ENSTSYG00000028402	FARP2 (ENSTSYG00000003599) #15	STK25 (ENSTSYG00000002980) #16	BOK (ENSTSYG00000035854) #17	THAP4 (ENSTSYG00000002410) #18	ATG4B (ENSTSYG00000011099) #19	ENSTSYG00000037438 #20	ING5 (ENSTSYG00000027487) #21	D2HGDH (ENSTSYG00000026014) #22	GAL3ST2 (ENSTSYG00000033878) #23	NEU4 (ENSTSYG00000027639)
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Mouse lemur	MODERN SPECIES	30	MAB21L4 (ENSMICG00000009170)	SNED1 (ENSMICG00000012979) #8	MTERF4 (ENSMICG00000044756) #9	PASK (ENSMICG00000013010) #10	ENSMICG00000017782	HDLBP (ENSMICG00000004569) #13	SEPTIN2 (ENSMICG00000000909) #14	FARP2 (ENSMICG00000012071) #15	STK25 (ENSMICG00000012111) #16	BOK (ENSMICG00000029950) #17	THAP4 (ENSMICG00000016452) #18	ATG4B (ENSMICG00000013114) #19	ENSMICG00000042660	DTYMK (ENSMICG00000013135) #20	ING5 (ENSMICG00000028191) #21	D2HGDH (ENSMICG00000016497) #22	GAL3ST2 (ENSMICG00000016500) #23	NEU4 (ENSMICG00000034826)	PDCD1 (ENSMICG00000032951) #24	RTP5 (ENSMICG00000045438)	ENSMICG00000017470	ENSMICG00000047235	ENSMICG00000000206	ACKR3 (ENSMICG00000008095)	IQCA1 (ENSMICG00000008062)	ASB18 (ENSMICG00000042020)	GBX2 (ENSMICG00000028176)	AGAP1 (ENSMICG00000008660)	SH3BP4 (ENSMICG00000004598)	ENSMICG00000034713	ARL4C (ENSMICG00000017503)
Lemuriformes_a	ANCESTRAL SPECIES	80	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.b #11	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Coquerels sifaka	MODERN SPECIES	879							HDLBP (ENSPCOG00000021622) #13	ENSPCOG00000028482 #14	FARP2 (ENSPCOG00000016260) #15	STK25 (ENSPCOG00000023236) #16	BOK (ENSPCOG00000012929) #17	THAP4 (ENSPCOG00000006649) #18	ATG4B (ENSPCOG00000014315) #19	DTYMK (ENSPCOG00000023194) #20	ING5 (ENSPCOG00000025941) #21	D2HGDH (ENSPCOG00000014775) #22	GAL3ST2 (ENSPCOG00000026156) #23	NEU4 (ENSPCOG00000019644)	PDCD1 (ENSPCOG00000022702) #24	RTP5 (ENSPCOG00000011030)
Greater bamboo lemur	MODERN SPECIES	509											BOK (ENSPSMG00000011852) #17	ENSPSMG00000011840	THAP4 (ENSPSMG00000011826) #18	ENSPSMG00000011794	ING5 (ENSPSMG00000011787) #21	D2HGDH (ENSPSMG00000011774) #22	GAL3ST2 (ENSPSMG00000011753) #23	NEU4 (ENSPSMG00000011725)	PDCD1 (ENSPSMG00000011707) #24
Bushbaby	MODERN SPECIES	472															ING5 (ENSOGAG00000034901) #21	D2HGDH (ENSOGAG00000029812) #22	NEU4 (ENSOGAG00000030618)	PDCD1 (ENSOGAG00000006347) #24	ENSOGAG00000025945
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Glires	ANCESTRAL SPECIES	14	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Lagomorpha	ANCESTRAL SPECIES	239										ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Rabbit	MODERN SPECIES	761										ENSOCUG00000021536 #17	THAP4 (ENSOCUG00000011164) #18	ENSOCUG00000032757	ATG4B (ENSOCUG00000021604) #19	DTYMK (ENSOCUG00000005955) #20	ING5 (ENSOCUG00000024916) #21	D2HGDH (ENSOCUG00000022982) #22	GAL3ST2 (ENSOCUG00000004955) #23	ENSOCUG00000021920	ENSOCUG00000008079 #24	ENSOCUG00000024447
Pika	MODERN SPECIES	3168																ENSOPRG00000015309 #22	GAL3ST2 (ENSOPRG00000015320) #23
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00940000157299	ENSGT00940000156973
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.a	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00940000157299	ENSGT00940000156973
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00940000157299	ENSGT00940000156973	ENSGT00940000154997
Chinese hamster chok1gshd	MODERN SPECIES	1	Sned1 (ENSCGRG00001002826) #8	Mterf4 (ENSCGRG00001006818) #9	Pask (ENSCGRG00001024785) #10	ENSCGRG00001001852 #11	Ano7 (ENSCGRG00001006513) #12	Hdlbp (ENSCGRG00001006086) #13	ENSCGRG00001009996 #14	Farp2 (ENSCGRG00001003923) #15	Stk25 (ENSCGRG00001005671) #16	Bok (ENSCGRG00001024808) #17	Thap4 (ENSCGRG00001002632) #18	ENSCGRG00001006751	Atg4b (ENSCGRG00001001760) #19	Dtymk (ENSCGRG00001000666) #20	Ing5 (ENSCGRG00001004863) #21	D2hgdh (ENSCGRG00001002513) #22	ENSCGRG00001000728 #23	Neu4 (ENSCGRG00001009931)	Pdcd1 (ENSCGRG00001002477) #24	Fam174a (ENSCGRG00001002695)	ENSCGRG00001010345	St8sia4 (ENSCGRG00001004612)	ENSCGRG00001004644	ENSCGRG00001003799	Slco4c1 (ENSCGRG00001010874)	ENSCGRG00001010780	Pam (ENSCGRG00001011006)	Gin1 (ENSCGRG00001004458)	Ppip5k2 (ENSCGRG00001002274)	Macir (ENSCGRG00001009855)	ENSCGRG00001003228
Golden Hamster	MODERN SPECIES	686	Sned1 (ENSMAUG00000017367) #8	Mterf4 (ENSMAUG00000000081) #9	Pask (ENSMAUG00000018648) #10	ENSMAUG00000013558 #11	Ano7 (ENSMAUG00000013132) #12	Hdlbp (ENSMAUG00000017743) #13	ENSMAUG00000011950 #14	Farp2 (ENSMAUG00000013770) #15	Stk25 (ENSMAUG00000009418) #16	Bok (ENSMAUG00000011149) #17	ENSMAUG00000009008 #18	Atg4b (ENSMAUG00000002031) #19	Dtymk (ENSMAUG00000000268) #20	ENSMAUG00000012792 #20	Ing5 (ENSMAUG00000010995) #21	D2hgdh (ENSMAUG00000008991) #22	ENSMAUG00000006662	ENSMAUG00000018549	Neu4 (ENSMAUG00000004468)	Pdcd1 (ENSMAUG00000000914) #24	Fam174a (ENSMAUG00000010921)	St8sia4 (ENSMAUG00000008068)	Slco4c1 (ENSMAUG00000016086)	ENSMAUG00000016737	Pam (ENSMAUG00000013243)	Gin1 (ENSMAUG00000014864)	Macir (ENSMAUG00000013352)	ENSMAUG00000018117	Nudt12 (ENSMAUG00000010818)	Efna5 (ENSMAUG00000016198)	ENSMAUG00000012566
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.a	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00940000157299	ENSGT00940000156973
Prairie vole	MODERN SPECIES	354	Sned1 (ENSMOCG00000002594) #8	Mterf4 (ENSMOCG00000010203) #9	Pask (ENSMOCG00000016982) #10	ENSMOCG00000012798	Ano7 (ENSMOCG00000000907) #12	Hdlbp (ENSMOCG00000006679) #13	ENSMOCG00000014906 #14	Farp2 (ENSMOCG00000021782) #15	Stk25 (ENSMOCG00000017547) #16	Bok (ENSMOCG00000016270) #17	ENSMOCG00000014492 #18	Atg4b (ENSMOCG00000013012) #19	Dtymk (ENSMOCG00000006228) #20	ENSMOCG00000005204 #20	Ing5 (ENSMOCG00000014178) #21	D2hgdh (ENSMOCG00000020154) #22	ENSMOCG00000007726 #23	Neu4 (ENSMOCG00000016739)	Pdcd1 (ENSMOCG00000014895) #24	ENSMOCG00000003363	Fam174a (ENSMOCG00000015018)	St8sia4 (ENSMOCG00000013060)	ENSMOCG00000009291	ENSMOCG00000006288	Slco4c1 (ENSMOCG00000004368)	ENSMOCG00000018358	ENSMOCG00000006301	Pam (ENSMOCG00000012283)	Gin1 (ENSMOCG00000021884)	Ppip5k2 (ENSMOCG00000020966)	Macir (ENSMOCG00000018727)
Northern American deer mouse	MODERN SPECIES	4	Sned1 (ENSPEMG00000008505) #8	Mterf4 (ENSPEMG00000026952) #9	Pask (ENSPEMG00000022938) #10	Ppp1r7 (ENSPEMG00000001859)	Ano7 (ENSPEMG00000011761) #12	Hdlbp (ENSPEMG00000017704) #13	ENSPEMG00000022937 #14	Farp2 (ENSPEMG00000023787) #15	Stk25 (ENSPEMG00000023590) #16	Bok (ENSPEMG00000023399) #17	Thap4 (ENSPEMG00000022638) #18	ENSPEMG00000002288	Atg4b (ENSPEMG00000023843) #19	Dtymk (ENSPEMG00000023813) #20	Ing5 (ENSPEMG00000021508) #21	D2hgdh (ENSPEMG00000021435) #22	ENSPEMG00000013727 #23	Neu4 (ENSPEMG00000022695)	Pdcd1 (ENSPEMG00000010110) #24	ENSPEMG00000028919	ENSPEMG00000001999	ENSPEMG00000013367	Fam174a (ENSPEMG00000023963)	St8sia4 (ENSPEMG00000025143)	Slco4c1 (ENSPEMG00000020395)	ENSPEMG00000030212	ENSPEMG00000017201	ENSPEMG00000014680	Pam (ENSPEMG00000008719)	Gin1 (ENSPEMG00000028100)	Ppip5k2 (ENSPEMG00000010567)
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT01080000257410.D.d.b.a	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00940000157299
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000158167	ENSGT00730000111317	ENSGT00390000017600
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000164023.c.b	ENSGT00940000158167	ENSGT00730000111317
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a.bb #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000164023.c.b	ENSGT00940000158167	ENSGT00730000111317
Mouse	MODERN SPECIES		Sned1 (ENSMUSG00000047793) #8	Mterf4 (ENSMUSG00000026273) #9	Pask (ENSMUSG00000026274) #10	Ppp1r7 (ENSMUSG00000026275)	Ano7 (ENSMUSG00000034107) #12	Hdlbp (ENSMUSG00000034088) #13	Septin2 (ENSMUSG00000026276) #14	Septin2 (ENSMUSG00000116048) #14	Farp2 (ENSMUSG00000034066) #15	Stk25 (ENSMUSG00000026277) #16	Bok (ENSMUSG00000026278) #17	Thap4 (ENSMUSG00000026279) #18	Atg4b (ENSMUSG00000026280) #19	Dtymk (ENSMUSG00000026281) #20	Ing5 (ENSMUSG00000026283) #21	D2hgdh (ENSMUSG00000073609) #22	Gal3st2 (ENSMUSG00000094651) #23	Gal3st2b (ENSMUSG00000093805) #23	Gal3st2c (ENSMUSG00000073608) #23	Neu4 (ENSMUSG00000034000)	Pdcd1 (ENSMUSG00000026285) #24	Fam174a (ENSMUSG00000051185)	St8sia4 (ENSMUSG00000040710)	Slco4c1 (ENSMUSG00000040693)	Slco6c1 (ENSMUSG00000026331)	Macir (ENSMUSG00000044768)	Ppip5k2 (ENSMUSG00000040648)	Gin1 (ENSMUSG00000026333)	Pam (ENSMUSG00000026335)	Slco6d1 (ENSMUSG00000026336)	Cntnap5b (ENSMUSG00000067028)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.z #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT01050000247607	ENSGT00950000182923.B.a.bb #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000164023.c.b	ENSGT00940000158167
spretus	MODERN SPECIES		Crocc2 (MGP_SPRETEiJ_G0015254) #7	Sned1 (MGP_SPRETEiJ_G0015255) #8	Mterf4 (MGP_SPRETEiJ_G0015256) #9	Pask (MGP_SPRETEiJ_G0015257) #10	Ppp1r7 (MGP_SPRETEiJ_G0015258)	Ano7 (MGP_SPRETEiJ_G0015259) #12	Hdlbp (MGP_SPRETEiJ_G0015260) #13	MGP_SPRETEiJ_G0015261 #14	Farp2 (MGP_SPRETEiJ_G0015262) #15	Stk25 (MGP_SPRETEiJ_G0015263) #16	Bok (MGP_SPRETEiJ_G0015264) #17	Thap4 (MGP_SPRETEiJ_G0015265) #18	Atg4b (MGP_SPRETEiJ_G0015266) #19	Dtymk (MGP_SPRETEiJ_G0015267) #20	Ing5 (MGP_SPRETEiJ_G0015268) #21	D2hgdh (MGP_SPRETEiJ_G0015269) #22	MGP_SPRETEiJ_G0015270	MGP_SPRETEiJ_G0015271 #23	MGP_SPRETEiJ_G0015272 #23	Neu4 (MGP_SPRETEiJ_G0015273)	Pdcd1 (MGP_SPRETEiJ_G0015274) #24	Fam174a (MGP_SPRETEiJ_G0015275)	St8sia4 (MGP_SPRETEiJ_G0015276)	Slco4c1 (MGP_SPRETEiJ_G0015277)	MGP_SPRETEiJ_G0015278	Macir (MGP_SPRETEiJ_G0015279)	Ppip5k2 (MGP_SPRETEiJ_G0015280)	Gin1 (MGP_SPRETEiJ_G0015281)	Pam (MGP_SPRETEiJ_G0015282)	MGP_SPRETEiJ_G0015283	Cntnap5b (MGP_SPRETEiJ_G0015284)
Steppe mouse	MODERN SPECIES	2151								ENSMSIG00000015660 #15	ENSMSIG00000015638 #16	Bok (ENSMSIG00000015629) #17	ENSMSIG00000015626	Thap4 (ENSMSIG00000015596) #18	Atg4b (ENSMSIG00000015526) #19	Dtymk (ENSMSIG00000015486) #20	Ing5 (ENSMSIG00000015435) #21	ENSMSIG00000015376 #22
Ryukyu mouse	MODERN SPECIES		Crocc2 (MGP_CAROLIEiJ_G0014450) #7	Sned1 (MGP_CAROLIEiJ_G0014451) #8	Mterf4 (MGP_CAROLIEiJ_G0014452) #9	Pask (MGP_CAROLIEiJ_G0014453) #10	Ppp1r7 (MGP_CAROLIEiJ_G0014454)	Ano7 (MGP_CAROLIEiJ_G0014455) #12	Hdlbp (MGP_CAROLIEiJ_G0014456) #13	MGP_CAROLIEiJ_G0014457 #14	Farp2 (MGP_CAROLIEiJ_G0014458) #15	Stk25 (MGP_CAROLIEiJ_G0014459) #16	Bok (MGP_CAROLIEiJ_G0014460) #17	Thap4 (MGP_CAROLIEiJ_G0014461) #18	Atg4b (MGP_CAROLIEiJ_G0014462) #19	Dtymk (MGP_CAROLIEiJ_G0014463) #20	Ing5 (MGP_CAROLIEiJ_G0014464) #21	D2hgdh (MGP_CAROLIEiJ_G0014465) #22	MGP_CAROLIEiJ_G0014466 #23	MGP_CAROLIEiJ_G0014467 #23	MGP_CAROLIEiJ_G0014468 #23	Neu4 (MGP_CAROLIEiJ_G0014469)	Pdcd1 (MGP_CAROLIEiJ_G0014470) #24	Fam174a (MGP_CAROLIEiJ_G0014471)	St8sia4 (MGP_CAROLIEiJ_G0014472)	Slco4c1 (MGP_CAROLIEiJ_G0014473)	Slco6c1 (MGP_CAROLIEiJ_G0014474)	Macir (MGP_CAROLIEiJ_G0014475)	Ppip5k2 (MGP_CAROLIEiJ_G0014476)	Gin1 (MGP_CAROLIEiJ_G0014477)	Pam (MGP_CAROLIEiJ_G0014478)	MGP_CAROLIEiJ_G0014479	Cntnap5b (MGP_CAROLIEiJ_G0014480)
Shrew mouse	MODERN SPECIES	18	Crocc2 (MGP_PahariEiJ_G0027686) #7	Sned1 (MGP_PahariEiJ_G0027687) #8	Mterf4 (MGP_PahariEiJ_G0027688) #9	Pask (MGP_PahariEiJ_G0027689) #10	Ppp1r7 (MGP_PahariEiJ_G0027690)	Ano7 (MGP_PahariEiJ_G0027691) #12	Hdlbp (MGP_PahariEiJ_G0027692) #13	MGP_PahariEiJ_G0027693 #14	Farp2 (MGP_PahariEiJ_G0027694) #15	Stk25 (MGP_PahariEiJ_G0027695) #16	Bok (MGP_PahariEiJ_G0027696) #17	Thap4 (MGP_PahariEiJ_G0027697) #18	Atg4b (MGP_PahariEiJ_G0027698) #19	Dtymk (MGP_PahariEiJ_G0027699) #20	Ing5 (MGP_PahariEiJ_G0027700) #21	D2hgdh (MGP_PahariEiJ_G0027701) #22	MGP_PahariEiJ_G0027702 #23	MGP_PahariEiJ_G0027703 #23	MGP_PahariEiJ_G0027704 #23	Neu4 (MGP_PahariEiJ_G0027705)	Pdcd1 (MGP_PahariEiJ_G0027706) #24	Fam174a (MGP_PahariEiJ_G0027707)	St8sia4 (MGP_PahariEiJ_G0027708)	Slco4c1 (MGP_PahariEiJ_G0027709)	MGP_PahariEiJ_G0027710	Macir (MGP_PahariEiJ_G0027711)	Ppip5k2 (MGP_PahariEiJ_G0027712)	Gin1 (MGP_PahariEiJ_G0027713)	Pam (MGP_PahariEiJ_G0027714)	Cdh20 (MGP_PahariEiJ_G0027715)	Rnf152 (MGP_PahariEiJ_G0027716)
Rat	MODERN SPECIES	19	Pask (ENSRNOG00000016888) #10	LOC102549694 (ENSRNOG00000066227)	AABR07068351.1 (ENSRNOG00000016974) #11	Ano7 (ENSRNOG00000023427) #12	Hdlbp (ENSRNOG00000031479) #13	Septin2 (ENSRNOG00000017952) #14	LOC100362040 (ENSRNOG00000030738)	Farp2 (ENSRNOG00000018051) #15	Stk25 (ENSRNOG00000018181) #16	Bok (ENSRNOG00000018214) #17	Thap4 (ENSRNOG00000018351) #18	AC109427.1 (ENSRNOG00000056259)	Atg4b (ENSRNOG00000018403) #19	Dtymk (ENSRNOG00000018904) #20	Ing5 (ENSRNOG00000018988) #21	D2hgdh (ENSRNOG00000019012) #22	Gal3st2c (ENSRNOG00000070509) #23	Neu4 (ENSRNOG00000019031)	Pdcd1 (ENSRNOG00000019043) #24	Chchd2l3 (ENSRNOG00000051180)	Fam174a (ENSRNOG00000019087)	ENSRNOG00000062997	St8sia4 (ENSRNOG00000019128)	Slco4c1 (ENSRNOG00000022711)	Slco6b1 (ENSRNOG00000019252)	AABR07068417.1 (ENSRNOG00000025797)	Slco6c1 (ENSRNOG00000013792)	Slco6d1 (ENSRNOG00000031146)	Pam (ENSRNOG00000033280)	Gin1 (ENSRNOG00000011962)	Ppip5k2 (ENSRNOG00000011613)
Upper Galilee mountains blind mole rat	MODERN SPECIES	634	Crocc2 (ENSNGAG00000021519) #7	Sned1 (ENSNGAG00000023743) #8	Mterf4 (ENSNGAG00000023724) #9	Pask (ENSNGAG00000007549) #10	ENSNGAG00000017337 #11	Ano7 (ENSNGAG00000022445) #12	Hdlbp (ENSNGAG00000014873) #13	ENSNGAG00000022412 #14	Farp2 (ENSNGAG00000004760) #15	Stk25 (ENSNGAG00000001501) #16	Bok (ENSNGAG00000023762) #17	Thap4 (ENSNGAG00000024010) #18	Atg4b (ENSNGAG00000018585) #19	Dtymk (ENSNGAG00000021440) #20	Ing5 (ENSNGAG00000023305) #21	D2hgdh (ENSNGAG00000023831) #22	Neu4 (ENSNGAG00000017190)	Pdcd1 (ENSNGAG00000019405) #24
Lesser Egyptian jerboa	MODERN SPECIES	146	Crocc2 (ENSJJAG00000005843) #7	Sned1 (ENSJJAG00000012102) #8	Mterf4 (ENSJJAG00000000477) #9	Pask (ENSJJAG00000020114) #10	Ppp1r7 (ENSJJAG00000018768)	Hdlbp (ENSJJAG00000003596) #13	ENSJJAG00000019868 #14	Farp2 (ENSJJAG00000011289) #15	Stk25 (ENSJJAG00000000845) #16	Bok (ENSJJAG00000022455) #17	Thap4 (ENSJJAG00000022829) #18	ENSJJAG00000019840 #19	ENSJJAG00000020306 #19	Dtymk (ENSJJAG00000016941) #20	Ing5 (ENSJJAG00000016649) #21	D2hgdh (ENSJJAG00000009431) #22	Neu4 (ENSJJAG00000003148)
Kangaroo rat	MODERN SPECIES	492	Mterf4 (ENSDORG00000028393) #9	Pask (ENSDORG00000004572) #10	Ppp1r7 (ENSDORG00000029280)	ENSDORG00000011305	ENSDORG00000028840 #13	ENSDORG00000000106 #14	ENSDORG00000026265 #15	Stk25 (ENSDORG00000000110) #16	Bok (ENSDORG00000027572) #17	ENSDORG00000023457	Thap4 (ENSDORG00000027598) #18	ENSDORG00000027774 #19	ENSDORG00000016601 #19	Dtymk (ENSDORG00000016603) #20	Ing5 (ENSDORG00000024121) #21	D2hgdh (ENSDORG00000004814) #22	ENSDORG00000015026	Pdcd1 (ENSDORG00000029674) #24	ENSDORG00000004666
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Naked mole-rat female	MODERN SPECIES	30	SNED1 (ENSHGLG00000003686) #8	MTERF4 (ENSHGLG00000003898) #9	PASK (ENSHGLG00000004004) #10	PPP1R7 (ENSHGLG00000004117) #11	HDLBP (ENSHGLG00000004910) #13	ENSHGLG00000005291 #14	FARP2 (ENSHGLG00000015024) #15	ENSHGLG00000042172	ENSHGLG00000014130	STK25 (ENSHGLG00000015089) #16	BOK (ENSHGLG00000015101) #17	THAP4 (ENSHGLG00000015125) #18	ATG4B (ENSHGLG00000018630) #19	DTYMK (ENSHGLG00000018717) #20	ING5 (ENSHGLG00000037490) #21	D2HGDH (ENSHGLG00000003119) #22	GAL3ST2 (ENSHGLG00000003311) #23	NEU4 (ENSHGLG00000003691)	PDCD1 (ENSHGLG00000032677) #24	ENSHGLG00000004109	ENSHGLG00000038816	ENSHGLG00000000610	ENSHGLG00000041212	TSPYL4 (ENSHGLG00000036673)	DSE (ENSHGLG00000041966)	CALHM6 (ENSHGLG00000033792)	TRAPPC3L (ENSHGLG00000002142)	CALHM5 (ENSHGLG00000035655)	CALHM4 (ENSHGLG00000002679)	ENSHGLG00000002331	ENSHGLG00000019728
Hystricomorpha_a	ANCESTRAL SPECIES	32	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24
Guinea pig	MODERN SPECIES	13	SNED1 (ENSCPOG00000006265) #8	MTERF4 (ENSCPOG00000025700) #9	PASK (ENSCPOG00000006277) #10	PPP1R7 (ENSCPOG00000006285) #11	HDLBP (ENSCPOG00000006297) #13	ENSCPOG00000013687 #14	ENSCPOG00000038694	FARP2 (ENSCPOG00000013335) #15	STK25 (ENSCPOG00000022798) #16	ENSCPOG00000025899	BOK (ENSCPOG00000030494) #17	THAP4 (ENSCPOG00000022107) #18	ATG4B (ENSCPOG00000000135) #19	DTYMK (ENSCPOG00000023727) #20	ING5 (ENSCPOG00000038093) #21	D2HGDH (ENSCPOG00000000007) #22	ENSCPOG00000005952 #23	ENSCPOG00000002229 #23	NEU4 (ENSCPOG00000007330)	PDCD1 (ENSCPOG00000037292) #24	ENSCPOG00000038878	ENSCPOG00000034749	ENSCPOG00000024854	ENSCPOG00000001586	ENSCPOG00000011923	ENSCPOG00000025453	ENSCPOG00000013424	OR11H4 (ENSCPOG00000011891)	ENSCPOG00000007078	PARP2 (ENSCPOG00000022667)	CCNB1IP1 (ENSCPOG00000009014)
Hystricomorpha_b	ANCESTRAL SPECIES	28	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098.r #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24
Degu	MODERN SPECIES	130	CROCC2 (ENSODEG00000013957) #7	SNED1 (ENSODEG00000009052) #8	MTERF4 (ENSODEG00000010009) #9	PASK (ENSODEG00000011073) #10	ENSODEG00000011577	ENSODEG00000012313 #13	ENSODEG00000010316 #14	ENSODEG00000019687	FARP2 (ENSODEG00000010817) #15	STK25 (ENSODEG00000010648) #16	BOK (ENSODEG00000011482) #17	THAP4 (ENSODEG00000010347) #18	ENSODEG00000009790 #19	DTYMK (ENSODEG00000010346) #20	ENSODEG00000011084 #21	D2HGDH (ENSODEG00000010827) #22	GAL3ST2 (ENSODEG00000009766) #23	NEU4 (ENSODEG00000012075)	PDCD1 (ENSODEG00000011912) #24
Long-tailed chinchilla	MODERN SPECIES	249	CROCC2 (ENSCLAG00000002724) #7	SNED1 (ENSCLAG00000002607) #8	MTERF4 (ENSCLAG00000002565) #9	PASK (ENSCLAG00000002519) #10	ENSCLAG00000002485	HDLBP (ENSCLAG00000002365) #13	ENSCLAG00000002255 #14	FARP2 (ENSCLAG00000002135) #15	STK25 (ENSCLAG00000002040) #16	BOK (ENSCLAG00000002024) #17	ENSCLAG00000002013	THAP4 (ENSCLAG00000002361) #18	ATG4B (ENSCLAG00000002262) #19	DTYMK (ENSCLAG00000002150) #20	ING5 (ENSCLAG00000002116) #21	D2HGDH (ENSCLAG00000001990) #22	GAL3ST2 (ENSCLAG00000001967) #23	NEU4 (ENSCLAG00000001894)	PDCD1 (ENSCLAG00000001882) #24
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Eurasian red squirrel	MODERN SPECIES	12	SNED1 (ENSSVLG00005010615) #8	MTERF4 (ENSSVLG00005010874) #9	ENSSVLG00005010962 #10	ENSSVLG00005011084	ENSSVLG00005011132	HDLBP (ENSSVLG00005011227) #13	ENSSVLG00005011546 #14	FARP2 (ENSSVLG00005011791) #15	STK25 (ENSSVLG00005011880) #16	BOK (ENSSVLG00005012052) #17	THAP4 (ENSSVLG00005012097) #18	ENSSVLG00005012212	ATG4B (ENSSVLG00005012261) #19	DTYMK (ENSSVLG00005012417) #20	ING5 (ENSSVLG00005012450) #21	D2HGDH (ENSSVLG00005012513) #22	GAL3ST2 (ENSSVLG00005012622) #23	NEU4 (ENSSVLG00005012671)	PDCD1 (ENSSVLG00005012721) #24	ENSSVLG00005012795	PRDM9 (ENSSVLG00005012896)
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00940000165655
Marmotini_b	ANCESTRAL SPECIES	41	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00940000165655
Arctic ground squirrel	MODERN SPECIES	972										BOK (ENSUPAG00010003241) #17	THAP4 (ENSUPAG00010003245) #18	ATG4B (ENSUPAG00010003261) #19	DTYMK (ENSUPAG00010003278) #20	ENSUPAG00010003293	ING5 (ENSUPAG00010003300) #21	D2HGDH (ENSUPAG00010003310) #22
Squirrel	MODERN SPECIES	345	GPR35 (ENSSTOG00000026086)	ENSSTOG00000022231	KIF1A (ENSSTOG00000021868)	AGXT (ENSSTOG00000008004)	MAB21L4 (ENSSTOG00000006007)	SNED1 (ENSSTOG00000031779) #8	ENSSTOG00000016306	HDLBP (ENSSTOG00000013331) #13	SEPTIN2 (ENSSTOG00000013357) #14	FARP2 (ENSSTOG00000022815) #15	STK25 (ENSSTOG00000026742) #16	BOK (ENSSTOG00000028135) #17	THAP4 (ENSSTOG00000015998) #18	ATG4B (ENSSTOG00000014734) #19	ING5 (ENSSTOG00000005977) #21	D2HGDH (ENSSTOG00000023380) #22	PDCD1 (ENSSTOG00000022396) #24	ENSSTOG00000025755
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	8	SNED1 (ENSMMMG00000007168) #8	MTERF4 (ENSMMMG00000007236) #9	ENSMMMG00000007249 #10	ENSMMMG00000007277	ENSMMMG00000007280	HDLBP (ENSMMMG00000007299) #13	SEPTIN2 (ENSMMMG00000007576) #14	ENSMMMG00000007620 #15	ENSMMMG00000007659 #15	STK25 (ENSMMMG00000007681) #16	ENSMMMG00000007706 #16	BOK (ENSMMMG00000007720) #17	THAP4 (ENSMMMG00000007741) #18	ATG4B (ENSMMMG00000007760) #19	DTYMK (ENSMMMG00000007781) #20	D2HGDH (ENSMMMG00000007799) #22	NEU4 (ENSMMMG00000007853)	PDCD1 (ENSMMMG00000007868) #24	ENSMMMG00000007882	ENSMMMG00000007896	ENSMMMG00000007913
Alpin marmot	MODERN SPECIES	275																ENSMMMG00000007944 #22
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Suina	ANCESTRAL SPECIES	3	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Chacoan peccary	MODERN SPECIES	832	SNED1 (ENSCWAG00000011634) #8	ENSCWAG00000012181 #9	PASK (ENSCWAG00000012224) #10	ENSCWAG00000012726	HDLBP (ENSCWAG00000013005) #13	SEPTIN2 (ENSCWAG00000013123) #14	ENSCWAG00000013218 #15	ENSCWAG00000013251 #15	STK25 (ENSCWAG00000013336) #16	BOK (ENSCWAG00000013639) #17	THAP4 (ENSCWAG00000013684) #18	ENSCWAG00000013803	ATG4B (ENSCWAG00000013856) #19	DTYMK (ENSCWAG00000013982) #20	ING5 (ENSCWAG00000014011) #21	D2HGDH (ENSCWAG00000014047) #22	NEU4 (ENSCWAG00000014312)	PDCD1 (ENSCWAG00000014661) #24	ENSCWAG00000014695	PRRX1 (ENSCWAG00000014722)	GORAB (ENSCWAG00000014835)	ENSCWAG00000014952	NTMT2 (ENSCWAG00000014967)	KIFAP3 (ENSCWAG00000015031)	SCYL3 (ENSCWAG00000015287)	C1orf112 (ENSCWAG00000015365)	METTL18 (ENSCWAG00000015401)	ENSCWAG00000015426	SELE (ENSCWAG00000015466)	SELL (ENSCWAG00000015551)	SELP (ENSCWAG00000015691)
Pig	MODERN SPECIES	6	CROCC2 (ENSSSCG00000036261) #7	SNED1 (ENSSSCG00000016381) #8	MTERF4 (ENSSSCG00000055566) #9	PASK (ENSSSCG00000016378) #10	PPP1R7 (ENSSSCG00000016376) #11	HDLBP (ENSSSCG00000016379) #13	SEPTIN2 (ENSSSCG00000016370) #14	FARP2 (ENSSSCG00000016368) #15	STK25 (ENSSSCG00000016372) #16	BOK (ENSSSCG00000032684) #17	THAP4 (ENSSSCG00000016374) #18	ENSSSCG00000034534	ATG4B (ENSSSCG00000032919) #19	DTYMK (ENSSSCG00000034147) #20	ING5 (ENSSSCG00000032505) #21	D2HGDH (ENSSSCG00000034101) #22	GAL3ST2 (ENSSSCG00000063392) #23	NEU4 (ENSSSCG00000037090)	PDCD1 (ENSSSCG00000037319) #24	ENSSSCG00000032511
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Cetacea	ANCESTRAL SPECIES	14	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00390000013662 #24	ENSGT00510000055442	ENSGT00950000182944.B.a
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00510000055442
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00390000008099.hb.a	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00390000013662 #24	ENSGT00510000055442
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000162473	ENSGT00390000008099.hb.a	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00390000013662 #24	ENSGT00510000055442
Narwhal	MODERN SPECIES	302	ENSMMNG00015006704	ENSMMNG00015006583	ENSMMNG00015006538	ANO7 (ENSMMNG00015006498) #12	HDLBP (ENSMMNG00015006421) #13	SEPTIN2 (ENSMMNG00015006371) #14	ENSMMNG00015006327 #15	ENSMMNG00015006295 #15	STK25 (ENSMMNG00015006252) #16	BOK (ENSMMNG00015006222) #17	ENSMMNG00015006208	THAP4 (ENSMMNG00015006183) #18	ATG4B (ENSMMNG00015006126) #19	DTYMK (ENSMMNG00015006094) #20	ING5 (ENSMMNG00015006077) #21	D2HGDH (ENSMMNG00015006051) #22	PDCD1 (ENSMMNG00015005985) #24	FAM240C (ENSMMNG00015005972)	GLI2 (ENSMMNG00015005932)
Beluga whale	MODERN SPECIES	84	PASK (ENSDLEG00000017274) #10	PPP1R7 (ENSDLEG00000017316)	ENSDLEG00000017363	ANO7 (ENSDLEG00000017385) #12	HDLBP (ENSDLEG00000017451) #13	SEPTIN2 (ENSDLEG00000017514) #14	ENSDLEG00000017553 #15	ENSDLEG00000017575 #15	STK25 (ENSDLEG00000017589) #16	BOK (ENSDLEG00000017618) #17	THAP4 (ENSDLEG00000017630) #18	ENSDLEG00000017639	ATG4B (ENSDLEG00000017656) #19	DTYMK (ENSDLEG00000017734) #20	ING5 (ENSDLEG00000017756) #21	D2HGDH (ENSDLEG00000017797) #22	PDCD1 (ENSDLEG00000017819) #24
Vaquita	MODERN SPECIES	18	ENSPSNG00000001072 #9	PASK (ENSPSNG00000001035) #10	ENSPSNG00000000982	ENSPSNG00000000858	HDLBP (ENSPSNG00000000752) #13	SEPTIN2 (ENSPSNG00000000627) #14	ENSPSNG00000000565 #15	ENSPSNG00000000527 #15	STK25 (ENSPSNG00000000486) #16	BOK (ENSPSNG00000000444) #17	ENSPSNG00000000415	THAP4 (ENSPSNG00000000375) #18	ATG4B (ENSPSNG00000000320) #19	DTYMK (ENSPSNG00000000294) #20	ING5 (ENSPSNG00000000271) #21	D2HGDH (ENSPSNG00000000233) #22	PDCD1 (ENSPSNG00000000211) #24	FAM240C (ENSPSNG00000000177)
Dolphin	MODERN SPECIES	2215																D2HGDH (ENSTTRG00000005745) #22	NEU4 (ENSTTRG00000005765)
Sperm whale	MODERN SPECIES	11	SNED1 (ENSPCTG00005012449) #8	MTERF4 (ENSPCTG00005013081) #9	PASK (ENSPCTG00005013139) #10	PPP1R7 (ENSPCTG00005013254)	ENSPCTG00005013491	HDLBP (ENSPCTG00005013527) #13	SEPTIN2 (ENSPCTG00005013946) #14	ENSPCTG00005014027 #15	ENSPCTG00005014275 #15	STK25 (ENSPCTG00005014400) #16	BOK (ENSPCTG00005014599) #17	THAP4 (ENSPCTG00005014654) #18	ATG4B (ENSPCTG00005014725) #19	DTYMK (ENSPCTG00005014797) #20	ING5 (ENSPCTG00005014848) #21	D2HGDH (ENSPCTG00005014900) #22	PDCD1 (ENSPCTG00005015179) #24
Blue whale	MODERN SPECIES	18	SNED1 (ENSBMSG00010009944) #8	MTERF4 (ENSBMSG00010009975) #9	ENSBMSG00010009987 #10	ENSBMSG00010010004	ENSBMSG00010010024	HDLBP (ENSBMSG00010010147) #13	SEPTIN2 (ENSBMSG00010010182) #14	ENSBMSG00010010208 #15	ENSBMSG00010010243 #15	STK25 (ENSBMSG00010010267) #16	BOK (ENSBMSG00010010287) #17	THAP4 (ENSBMSG00010010301) #18	ENSBMSG00010010330 #19	DTYMK (ENSBMSG00010010353) #20	ENSBMSG00010010363 #21	D2HGDH (ENSBMSG00010010370) #22	PDCD1 (ENSBMSG00010010423) #24	ENSBMSG00010010435
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Yarkand deer	MODERN SPECIES	12	AGXT (ENSCHYG00000023786)	MAB21L4 (ENSCHYG00000023894)	SNED1 (ENSCHYG00000024133) #8	PASK (ENSCHYG00000024901) #10	ENSCHYG00000025037	HDLBP (ENSCHYG00000025206) #13	ENSCHYG00000005057 #14	FARP2 (ENSCHYG00000005254) #15	STK25 (ENSCHYG00000005741) #16	ENSCHYG00000005861 #17	THAP4 (ENSCHYG00000005901) #18	ENSCHYG00000005951	ATG4B (ENSCHYG00000005974) #19	DTYMK (ENSCHYG00000005997) #20	ING5 (ENSCHYG00000006024) #21	D2HGDH (ENSCHYG00000006084) #22	GAL3ST2 (ENSCHYG00000006191) #23	NEU4 (ENSCHYG00000006219)	PDCD1 (ENSCHYG00000006272) #24	ENSCHYG00000006359	ENSCHYG00000006368
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Siberian musk deer	MODERN SPECIES	1128	MAB21L4 (ENSMMSG00000006074)	SNED1 (ENSMMSG00000006119) #8	ENSMMSG00000006267 #9	PASK (ENSMMSG00000006289) #10	ENSMMSG00000006344	HDLBP (ENSMMSG00000006415) #13	ENSMMSG00000006500 #14	FARP2 (ENSMMSG00000006577) #15	STK25 (ENSMMSG00000006751) #16	BOK (ENSMMSG00000006957) #17	THAP4 (ENSMMSG00000007000) #18	ENSMMSG00000007062	ATG4B (ENSMMSG00000007090) #19	DTYMK (ENSMMSG00000007140) #20	ING5 (ENSMMSG00000007156) #21	D2HGDH (ENSMMSG00000007189) #22	GAL3ST2 (ENSMMSG00000007246) #23	NEU4 (ENSMMSG00000007270)	PDCD1 (ENSMMSG00000007315) #24	ENSMMSG00000007349
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Caprinae	ANCESTRAL SPECIES	2	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00510000055442
Goat	DUPLICATION
Goat	MODERN SPECIES	126																ENSCHIG00000006670 #22	GAL3ST2 (ENSCHIG00000011341) #23	NEU4 (ENSCHIG00000016718)	ENSCHIG00000010033 #24
Goat	MODERN SPECIES	22	MAB21L4 (ENSCHIG00000026979)	SNED1 (ENSCHIG00000021345) #8	MTERF4 (ENSCHIG00000022070) #9	PASK (ENSCHIG00000007156) #10	ENSCHIG00000012347	HDLBP (ENSCHIG00000022364) #13	SEPTIN2 (ENSCHIG00000026614) #14	FARP2 (ENSCHIG00000027255) #15	STK25 (ENSCHIG00000021875) #16	BOK (ENSCHIG00000026381) #17	ENSCHIG00000014554	THAP4 (ENSCHIG00000020478) #18	ATG4B (ENSCHIG00000018105) #19	DTYMK (ENSCHIG00000024323) #20	ING5 (ENSCHIG00000013163) #21	ENSCHIG00000019983 #22	ENSCHIG00000001465	ENSCHIG00000010191
Rambouillet Sheep	MODERN SPECIES		GPR35 (ENSOARG00020000975)	ENSOARG00020000955	KIF1A (ENSOARG00020000824)	AGXT (ENSOARG00020000775)	MAB21L4 (ENSOARG00020000754)	CROCC2 (ENSOARG00020000704) #7	SNED1 (ENSOARG00020000363) #8	ENSOARG00020000194	HDLBP (ENSOARG00020000111) #13	SEPTIN2 (ENSOARG00020000087) #14	STK25 (ENSOARG00020000074) #16	THAP4 (ENSOARG00020000069) #18	ATG4B (ENSOARG00020000066) #19	DTYMK (ENSOARG00020000065) #20	ING5 (ENSOARG00020000064) #21	D2HGDH (ENSOARG00020000060) #22	GAL3ST2 (ENSOARG00020000059) #23	NEU4 (ENSOARG00020000055)	ENSOARG00020000053 #24	FAM240C (ENSOARG00020000042)
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170.a	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Bos	ANCESTRAL SPECIES		ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Bos_b	ANCESTRAL SPECIES	45	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00940000162350.b.b
Hybrid Bos Indicus	MODERN SPECIES	22	AGXT (ENSBIXG00005019708)	MAB21L4 (ENSBIXG00005019680)	CROCC2 (ENSBIXG00005019657) #7	SNED1 (ENSBIXG00005019613) #8	PASK (ENSBIXG00005019482) #10	ENSBIXG00005019419	HDLBP (ENSBIXG00005019344) #13	SEPTIN2 (ENSBIXG00005019099) #14	FARP2 (ENSBIXG00005018965) #15	STK25 (ENSBIXG00005018864) #16	BOK (ENSBIXG00005018673) #17	THAP4 (ENSBIXG00005018636) #18	ATG4B (ENSBIXG00005018568) #19	DTYMK (ENSBIXG00005003000) #20	ING5 (ENSBIXG00005018529) #21	D2HGDH (ENSBIXG00005018508) #22	GAL3ST2 (ENSBIXG00005018473) #23	NEU4 (ENSBIXG00005018451)	ENSBIXG00005018415 #24	ENSBIXG00005018390	FAM240C (ENSBIXG00005002972)	ENSBIXG00005018344
Cow	MODERN SPECIES	22	MAB21L4 (ENSBTAG00000012374)	CROCC2 (ENSBTAG00000005168) #7	SNED1 (ENSBTAG00000014132) #8	MTERF4 (ENSBTAG00000000784) #9	PASK (ENSBTAG00000000785) #10	PPP1R7 (ENSBTAG00000000789)	HDLBP (ENSBTAG00000004315) #13	SEPTIN2 (ENSBTAG00000002608) #14	FARP2 (ENSBTAG00000013110) #15	STK25 (ENSBTAG00000009676) #16	BOK (ENSBTAG00000008711) #17	THAP4 (ENSBTAG00000013253) #18	ATG4B (ENSBTAG00000015401) #19	DTYMK (ENSBTAG00000015408) #20	ING5 (ENSBTAG00000009123) #21	D2HGDH (ENSBTAG00000002847) #22	GAL3ST2 (ENSBTAG00000009093) #23	NEU4 (ENSBTAG00000014833)	PDCD1 (ENSBTAG00000011543) #24	RTP5 (ENSBTAG00000040598)	ENSBTAG00000054669	ENSBTAG00000030892
Bos_a	ANCESTRAL SPECIES	65	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Domestic yak	MODERN SPECIES	22	ENSBGRG00000000737 #7	SNED1 (ENSBGRG00000000812) #8	MTERF4 (ENSBGRG00000000960) #9	PASK (ENSBGRG00000001050) #10	PPP1R7 (ENSBGRG00000001494) #11	HDLBP (ENSBGRG00000001532) #13	SEPTIN2 (ENSBGRG00000001628) #14	ENSBGRG00000001659 #15	ENSBGRG00000001709 #15	STK25 (ENSBGRG00000001737) #16	BOK (ENSBGRG00000001796) #17	THAP4 (ENSBGRG00000001809) #18	ATG4B (ENSBGRG00000001839) #19	DTYMK (ENSBGRG00000001869) #20	ING5 (ENSBGRG00000001892) #21	D2HGDH (ENSBGRG00000001912) #22	GAL3ST2 (ENSBGRG00000001946) #23	NEU4 (ENSBGRG00000001960)	PDCD1 (ENSBGRG00000001972) #24	ENSBGRG00000002010	ENSBGRG00000002019	FAM240C (ENSBGRG00000002034)	ENSBGRG00000002046
Wild yak	MODERN SPECIES	1292	MAB21L4 (ENSBMUG00000010834)	ENSBMUG00000010864 #7	SNED1 (ENSBMUG00000011079) #8	MTERF4 (ENSBMUG00000011109) #9	PASK (ENSBMUG00000011286) #10	ENSBMUG00000011436	HDLBP (ENSBMUG00000011512) #13	SEPTIN2 (ENSBMUG00000011562) #14	ENSBMUG00000011602 #15	STK25 (ENSBMUG00000011663) #16	BOK (ENSBMUG00000011678) #17	ENSBMUG00000011686 #18	ATG4B (ENSBMUG00000011703) #19	DTYMK (ENSBMUG00000011726) #20	ING5 (ENSBMUG00000011751) #21	D2HGDH (ENSBMUG00000011772) #22	GAL3ST2 (ENSBMUG00000011800) #23	PDCD1 (ENSBMUG00000011821) #24	ENSBMUG00000011839	FAM240C (ENSBMUG00000011856)
American bison	MODERN SPECIES	2779				HDLBP (ENSBBBG00000025205) #13	SEPTIN2 (ENSBBBG00000024929) #14	ENSBBBG00000007729 #15	ENSBBBG00000024830 #15	ENSBBBG00000006812 #16	STK25 (ENSBBBG00000008224) #16	BOK (ENSBBBG00000007724) #17	ENSBBBG00000008217 #18	ENSBBBG00000006496	ATG4B (ENSBBBG00000024719) #19	DTYMK (ENSBBBG00000024700) #20	ING5 (ENSBBBG00000006484) #21	D2HGDH (ENSBBBG00000000175) #22
Camelidae	ANCESTRAL SPECIES	87	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Arabian camel	MODERN SPECIES	31	ENSCDRG00005021762	ENSCDRG00005021764 #8	MTERF4 (ENSCDRG00005021768) #9	PASK (ENSCDRG00005021771) #10	ENSCDRG00005021780	HDLBP (ENSCDRG00005021789) #13	SEPTIN2 (ENSCDRG00005021804) #14	ENSCDRG00005021815 #15	ENSCDRG00005000066 #15	STK25 (ENSCDRG00005000090) #16	ENSCDRG00005000190 #17	ENSCDRG00005000232 #18	ATG4B (ENSCDRG00005000273) #19	ENSCDRG00005000350 #20	ING5 (ENSCDRG00005000394) #21	D2HGDH (ENSCDRG00005000420) #22	NEU4 (ENSCDRG00005000455)	PDCD1 (ENSCDRG00005000464) #24	ENSCDRG00005000478	FAM240C (ENSCDRG00005000494)
Alpaca	MODERN SPECIES	2293																ENSVPAG00000010863 #22
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.b #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Ursus	ANCESTRAL SPECIES	12	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.b #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Polar bear	MODERN SPECIES	169	CROCC2 (ENSUMAG00000010789) #7	ENSUMAG00000010780 #8	MTERF4 (ENSUMAG00000010771) #9	PASK (ENSUMAG00000010599) #10	ENSUMAG00000010567	ANO7 (ENSUMAG00000010556) #12	HDLBP (ENSUMAG00000010539) #13	SEPTIN2 (ENSUMAG00000010525) #14	FARP2 (ENSUMAG00000010519) #15	STK25 (ENSUMAG00000010503) #16	ENSUMAG00000010497 #17	ENSUMAG00000010490 #18	ATG4B (ENSUMAG00000010475) #19	DTYMK (ENSUMAG00000010470) #20	ING5 (ENSUMAG00000010455) #21	D2HGDH (ENSUMAG00000010446) #22	ENSUMAG00000010440 #23	PDCD1 (ENSUMAG00000010435) #24	ENSUMAG00000010426	ENSUMAG00000010313
American black bear	MODERN SPECIES	397								FARP2 (ENSUAMG00000008202) #15	STK25 (ENSUAMG00000008482) #16	BOK (ENSUAMG00000008483) #17	ENSUAMG00000008484 #18	ENSUAMG00000008485 #19	ENSUAMG00000008486 #19	DTYMK (ENSUAMG00000008487) #20	ING5 (ENSUAMG00000008488) #21	D2HGDH (ENSUAMG00000008489) #22	GAL3ST2 (ENSUAMG00000008490) #23	NEU4 (ENSUAMG00000008492)	PDCD1 (ENSUAMG00000008493) #24	ENSUAMG00000008494
Giant Panda	MODERN SPECIES	11	AGXT (ENSAMEG00000016700)	MAB21L4 (ENSAMEG00000016697)	CROCC2 (ENSAMEG00000016680) #7	SNED1 (ENSAMEG00000016675) #8	MTERF4 (ENSAMEG00000016670) #9	PASK (ENSAMEG00000016638) #10	ANO7 (ENSAMEG00000016590) #12	HDLBP (ENSAMEG00000016552) #13	ENSAMEG00000028718 #17	ENSAMEG00000023910 #14	FARP2 (ENSAMEG00000016513) #15	STK25 (ENSAMEG00000016473) #16	ATG4B (ENSAMEG00000016425) #19	ENSAMEG00000016421 #20	ING5 (ENSAMEG00000016412) #21	D2HGDH (ENSAMEG00000016397) #22	GAL3ST2 (ENSAMEG00000023677) #23	NEU4 (ENSAMEG00000016386)	PDCD1 (ENSAMEG00000016373) #24	ENSAMEG00000027207	ENSAMEG00000031114
Mustelinae	ANCESTRAL SPECIES	21	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442	ENSGT00390000015050	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d	ENSGT00940000154714	ENSGT00950000182837.b.b	ENSGT00940000157055
American mink	MODERN SPECIES	275	ENSNVIG00000017789 #8	MTERF4 (ENSNVIG00000017805) #9	PASK (ENSNVIG00000017829) #10	ENSNVIG00000017870	ANO7 (ENSNVIG00000017977) #12	HDLBP (ENSNVIG00000018029) #13	SEPTIN2 (ENSNVIG00000018096) #14	FARP2 (ENSNVIG00000018158) #15	STK25 (ENSNVIG00000018289) #16	BOK (ENSNVIG00000018340) #17	ENSNVIG00000018353 #18	ENSNVIG00000018363 #18	ATG4B (ENSNVIG00000018383) #19	DTYMK (ENSNVIG00000018398) #20	ING5 (ENSNVIG00000018407) #21	D2HGDH (ENSNVIG00000018435) #22	GAL3ST2 (ENSNVIG00000018436) #23	NEU4 (ENSNVIG00000018459)	PDCD1 (ENSNVIG00000018495) #24	CB085 (ENSNVIG00000018518)	FAM240C (ENSNVIG00000018529)	ENSNVIG00000018582	ENSNVIG00000020114	MMADHC (ENSNVIG00000020125)
Ferret	MODERN SPECIES	173	SNED1 (ENSMPUG00000000147) #8	ENSMPUG00000000152	MTERF4 (ENSMPUG00000000155) #9	PASK (ENSMPUG00000000158) #10	ANO7 (ENSMPUG00000000160) #12	HDLBP (ENSMPUG00000000163) #13	SEPTIN2 (ENSMPUG00000000166) #14	FARP2 (ENSMPUG00000000175) #15	STK25 (ENSMPUG00000000176) #16	ENSMPUG00000000178	BOK (ENSMPUG00000000179) #17	THAP4 (ENSMPUG00000000182) #18	ATG4B (ENSMPUG00000000187) #19	DTYMK (ENSMPUG00000000189) #20	ING5 (ENSMPUG00000000190) #21	D2HGDH (ENSMPUG00000000191) #22	GAL3ST2 (ENSMPUG00000000193) #23	NEU4 (ENSMPUG00000000195)	PDCD1 (ENSMPUG00000000197) #24	ENSMPUG00000000200	ENSMPUG00000000203	MMADHC (ENSMPUG00000000323)	ENSMPUG00000000330	RND3 (ENSMPUG00000000331)	RBM43 (ENSMPUG00000000342)	NMI (ENSMPUG00000000344)	TNFAIP6 (ENSMPUG00000000370)	RIF1 (ENSMPUG00000000371)	NEB (ENSMPUG00000000376)	ARL5A (ENSMPUG00000000396)	CACNB4 (ENSMPUG00000000400)
Canidae	ANCESTRAL SPECIES	20	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098.ib.b #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00940000160730 #8	ENSGT00390000000703.h.lb.b	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098.ib.b #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Dog	MODERN SPECIES	17	SNED1 (ENSCAFG00845021016) #8	ENSCAFG00845021865	ENSCAFG00845021901 #9	PASK (ENSCAFG00845021974) #10	PPP1R7 (ENSCAFG00845022243) #11	ANO7 (ENSCAFG00845022518) #12	HDLBP (ENSCAFG00845022763) #13	SEPTIN2 (ENSCAFG00845023027) #14	FARP2 (ENSCAFG00845023180) #15	STK25 (ENSCAFG00845023492) #16	ENSCAFG00845023631 #17	THAP4 (ENSCAFG00845023699) #18	ATG4B (ENSCAFG00845023776) #19	ENSCAFG00845023877 #20	ING5 (ENSCAFG00845024016) #21	D2HGDH (ENSCAFG00845024104) #22	NEU4 (ENSCAFG00845024166)	PDCD1 (ENSCAFG00845024308) #24	ENSCAFG00845024371
Dingo	MODERN SPECIES	304	SNED1 (ENSCAFG00020024966) #8	ENSCAFG00020025030	ENSCAFG00020025033 #9	PASK (ENSCAFG00020025046) #10	ENSCAFG00020025077	ANO7 (ENSCAFG00020025079) #12	HDLBP (ENSCAFG00020025089) #13	ENSCAFG00020025094 #14	FARP2 (ENSCAFG00020025110) #15	STK25 (ENSCAFG00020025119) #16	BOK (ENSCAFG00020025122) #17	THAP4 (ENSCAFG00020025129) #18	ATG4B (ENSCAFG00020025174) #19	DTYMK (ENSCAFG00020025418) #20	ING5 (ENSCAFG00020025420) #21	D2HGDH (ENSCAFG00020025422) #22	GAL3ST2 (ENSCAFG00020025423) #23	NEU4 (ENSCAFG00020025425)	PDCD1 (ENSCAFG00020025435) #24	ENSCAFG00020025437
Red fox	MODERN SPECIES	253	AGXT (ENSVVUG00000022967)	MAB21L4 (ENSVVUG00000022960)	ENSVVUG00000022955	SNED1 (ENSVVUG00000022810) #8	PASK (ENSVVUG00000022805) #10	PPP1R7 (ENSVVUG00000022804)	HDLBP (ENSVVUG00000022797) #13	SEPT2 (ENSVVUG00000022793) #14	ENSVVUG00000022790 #15	ENSVVUG00000022785 #15	STK25 (ENSVVUG00000022783) #16	ENSVVUG00000022782 #17	THAP4 (ENSVVUG00000022780) #18	ATG4B (ENSVVUG00000022778) #19	DTYMK (ENSVVUG00000022764) #20	D2HGDH (ENSVVUG00000022757) #22	GAL3ST2 (ENSVVUG00000022752) #23	ENSVVUG00000022750	ENSVVUG00000022748 #24	RTP5 (ENSVVUG00000022746)
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Panthera	ANCESTRAL SPECIES	9	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Tiger	MODERN SPECIES	218	AGXT (ENSPTIG00000016856)	MTERF4 (ENSPTIG00000012832) #9	PASK (ENSPTIG00000006193) #10	PPP1R7 (ENSPTIG00000020796) #11	ANO7 (ENSPTIG00000017939) #12	HDLBP (ENSPTIG00000009328) #13	SEPTIN2 (ENSPTIG00000004202) #14	FARP2 (ENSPTIG00000018255) #15	STK25 (ENSPTIG00000017429) #16	BOK (ENSPTIG00000016435) #17	ENSPTIG00000015480 #18	ENSPTIG00000015344	ENSPTIG00000015107 #19	DTYMK (ENSPTIG00000014764) #20	ING5 (ENSPTIG00000013252) #21	D2HGDH (ENSPTIG00000012686) #22	NEU4 (ENSPTIG00000012287)	ENSPTIG00000011932
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00910000148484	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00900000143170	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
leopard	MODERN SPECIES	12	MAB21L4 (ENSPPRG00000006592)	CROCC2 (ENSPPRG00000008256) #7	SNED1 (ENSPPRG00000013999) #8	MTERF4 (ENSPPRG00000016102) #9	PASK (ENSPPRG00000001870) #10	PPP1R7 (ENSPPRG00000004627) #11	HDLBP (ENSPPRG00000010215) #13	SEPTIN2 (ENSPPRG00000012154) #14	FARP2 (ENSPPRG00000018957) #15	STK25 (ENSPPRG00000023379) #16	BOK (ENSPPRG00000023173) #17	THAP4 (ENSPPRG00000001382) #18	ATG4B (ENSPPRG00000005113) #19	DTYMK (ENSPPRG00000005334) #20	ING5 (ENSPPRG00000006207) #21	D2HGDH (ENSPPRG00000007202) #22	GAL3ST2 (ENSPPRG00000007375) #23	NEU4 (ENSPPRG00000008112)	PDCD1 (ENSPPRG00000008342) #24	ENSPPRG00000008537	FAM240C (ENSPPRG00000008747)
lion	MODERN SPECIES	8	ENSPLOG00000012697	PPP1R7 (ENSPLOG00000012498) #11	ANO7 (ENSPLOG00000012088) #12	HDLBP (ENSPLOG00000011820) #13	SEPTIN2 (ENSPLOG00000011660) #14	ENSPLOG00000011615	ENSPLOG00000011349 #15	ENSPLOG00000011251 #15	STK25 (ENSPLOG00000011112) #16	BOK (ENSPLOG00000011035) #17	ENSPLOG00000011021	THAP4 (ENSPLOG00000010941) #18	ATG4B (ENSPLOG00000010727) #19	DTYMK (ENSPLOG00000010691) #20	ING5 (ENSPLOG00000010655) #21	D2HGDH (ENSPLOG00000010624) #22	GAL3ST2 (ENSPLOG00000010582) #23	NEU4 (ENSPLOG00000010542)	PDCD1 (ENSPLOG00000010510) #24	ENSPLOG00000010473	FAM240C (ENSPLOG00000010435)
Cat	MODERN SPECIES	239	SNED1 (ENSFCAG00000010450) #8	MTERF4 (ENSFCAG00000010451) #9	PASK (ENSFCAG00000000959) #10	PPP1R7 (ENSFCAG00000010452)	ANO7 (ENSFCAG00000010453) #12	HDLBP (ENSFCAG00000010455) #13	SEPTIN2 (ENSFCAG00000002797) #14	FARP2 (ENSFCAG00000002801) #15	STK25 (ENSFCAG00000002803) #16	BOK (ENSFCAG00000014277) #17	THAP4 (ENSFCAG00000014280) #18	ENSFCAG00000046954	ATG4B (ENSFCAG00000014281) #19	DTYMK (ENSFCAG00000014282) #20	ING5 (ENSFCAG00000043477) #21	D2HGDH (ENSFCAG00000014284) #22	GAL3ST2 (ENSFCAG00000042426) #23	NEU4 (ENSFCAG00000004992)	PDCD1 (ENSFCAG00000014287) #24	RTP5 (ENSFCAG00000048136)	FAM240C (ENSFCAG00000042944)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732	ENSGT00510000055442
Greater horseshoe bat	MODERN SPECIES	26	MAB21L4 (ENSRFEG00010001650)	SNED1 (ENSRFEG00010001292) #8	MTERF4 (ENSRFEG00010001122) #9	PASK (ENSRFEG00010001084) #10	ENSRFEG00010001029	ANO7 (ENSRFEG00010001001) #12	ENSRFEG00010000976 #13	SEPTIN2 (ENSRFEG00010000923) #14	FARP2 (ENSRFEG00010000873) #15	STK25 (ENSRFEG00010000825) #16	BOK (ENSRFEG00010000801) #17	THAP4 (ENSRFEG00010000777) #18	ATG4B (ENSRFEG00010000748) #19	DTYMK (ENSRFEG00010000727) #20	ING5 (ENSRFEG00010000702) #21	D2HGDH (ENSRFEG00010000683) #22	GAL3ST2 (ENSRFEG00010000668) #23	NEU4 (ENSRFEG00010000653)	PDCD1 (ENSRFEG00010000631) #24	ENSRFEG00010000618	FAM240C (ENSRFEG00010000608)
Microbat	MODERN SPECIES	942	SNED1 (ENSMLUG00000012911) #8	MTERF4 (ENSMLUG00000005579) #9	PASK (ENSMLUG00000005589) #10	ENSMLUG00000005606	ANO7 (ENSMLUG00000005611) #12	HDLBP (ENSMLUG00000005628) #13	SEPTIN2 (ENSMLUG00000007108) #14	FARP2 (ENSMLUG00000007123) #15	ENSMLUG00000022825	STK25 (ENSMLUG00000007158) #16	BOK (ENSMLUG00000028632) #17	THAP4 (ENSMLUG00000007192) #18	ATG4B (ENSMLUG00000028269) #19	DTYMK (ENSMLUG00000028996) #20	ING5 (ENSMLUG00000029235) #21	D2HGDH (ENSMLUG00000027975) #22	GAL3ST2 (ENSMLUG00000003372) #23	NEU4 (ENSMLUG00000003374)	PDCD1 (ENSMLUG00000009623) #24	ENSMLUG00000009638	NUP35 (ENSMLUG00000013154)	DUSP19 (ENSMLUG00000013149)	NCKAP1 (ENSMLUG00000011345)	ENSMLUG00000030095	ENSMLUG00000027215	DNAJC10 (ENSMLUG00000000680)	PDE1A (ENSMLUG00000009939)	ENSMLUG00000009929	ITPRID2 (ENSMLUG00000011724)	NEUROD1 (ENSMLUG00000025259)	ENSMLUG00000014227
Megabat	MODERN SPECIES	2095													ATG4B (ENSPVAG00000007021) #19	DTYMK (ENSPVAG00000007023) #20	ING5 (ENSPVAG00000007024) #21	D2HGDH (ENSPVAG00000007025) #22
Equus	ANCESTRAL SPECIES	15	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059.f #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000163732
Horse	MODERN SPECIES	27	MAB21L4 (ENSECAG00000023443)	CROCC2 (ENSECAG00000023710) #7	SNED1 (ENSECAG00000024612) #8	MTERF4 (ENSECAG00000011622) #9	PASK (ENSECAG00000011785) #10	PPP1R7 (ENSECAG00000017246) #12	HDLBP (ENSECAG00000012829) #13	SEPTIN2 (ENSECAG00000017553) #14	FARP2 (ENSECAG00000008144) #15	STK25 (ENSECAG00000017650) #16	BOK (ENSECAG00000000238) #17	THAP4 (ENSECAG00000000252) #18	ATG4B (ENSECAG00000006659) #19	ENSECAG00000047800 #20	ING5 (ENSECAG00000014401) #21	D2HGDH (ENSECAG00000018063) #22	GAL3ST2 (ENSECAG00000021338) #23	NEU4 (ENSECAG00000021892)	PDCD1 (ENSECAG00000023275) #24	ENSECAG00000037242	ENSECAG00000033624	ENSECAG00000058925	ENSECAG00000041546	USP18 (ENSECAG00000000284)	TUBA8 (ENSECAG00000013982)	PEX26 (ENSECAG00000014438)	MICAL3 (ENSECAG00000004993)	BID (ENSECAG00000006592)	BCL2L13 (ENSECAG00000010335)	ATP6V1E1 (ENSECAG00000016487)	SLC25A18 (ENSECAG00000008033)
Donkey	MODERN SPECIES	10	SNED1 (ENSEASG00005008171) #8	MTERF4 (ENSEASG00005008185) #9	ENSEASG00005037592 #10	ENSEASG00005008227	ENSEASG00005025357 #12	ENSEASG00005008231 #12	HDLBP (ENSEASG00005008249) #13	SEPTIN2 (ENSEASG00005008254) #14	FARP2 (ENSEASG00005008264) #15	STK25 (ENSEASG00005008279) #16	BOK (ENSEASG00005008290) #17	THAP4 (ENSEASG00005008293) #18	ATG4B (ENSEASG00005008298) #19	ENSEASG00005008301 #20	ING5 (ENSEASG00005008302) #21	D2HGDH (ENSEASG00005008304) #22	GAL3ST2 (ENSEASG00005023877) #23	NEU4 (ENSEASG00005027161)	PDCD1 (ENSEASG00005008310) #24	ENSEASG00005038563	ENSEASG00005008365	ENSEASG00005026883	ENSEASG00005034945	ENSEASG00005031656	ENSEASG00005029923
Eulipotyphla	ANCESTRAL SPECIES	2285																ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23
Hedgehog	MODERN SPECIES	7351																ENSEEUG00000012314 #22
Common shrew	MODERN SPECIES	5761																ENSSARG00000007396 #22	ENSSARG00000007446 #23
Atlantogenata	ANCESTRAL SPECIES																	ENSGT00550000075086 #22
Afrotheria	ANCESTRAL SPECIES																	ENSGT00550000075086 #22
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00550000075086 #22
Hyrax	MODERN SPECIES	6065																ENSPCAG00000010584 #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162	ENSGT00390000006126
Opossum	MODERN SPECIES	6	CLDN1 (ENSMODG00000047456)	CLDN16 (ENSMODG00000015088)	IL1RAP (ENSMODG00000015095)	ENSMODG00000050076	OSTN (ENSMODG00000015103)	CCDC50 (ENSMODG00000015112)	FGF12 (ENSMODG00000015116)	ENSMODG00000015119	PLAAT1 (ENSMODG00000015123)	ATP13A4 (ENSMODG00000015137)	OPA1 (ENSMODG00000015156)	ATG4B (ENSMODG00000008658) #19	ENSMODG00000039725 #20	ENSMODG00000008649 #20	ING5 (ENSMODG00000008639) #21	D2HGDH (ENSMODG00000008616) #22	GAL3ST2 (ENSMODG00000008603) #23	NEU4 (ENSMODG00000037347)	ENSMODG00000029268 #24	ENSMODG00000008563	RTP1 (ENSMODG00000008542)	ENSMODG00000043766	MASP1 (ENSMODG00000008535)	SST (ENSMODG00000008503)	ENSMODG00000045616	ENSMODG00000042478	ENSMODG00000016079 #18	BOK (ENSMODG00000016075) #17	FARP2 (ENSMODG00000016044) #15	SEPTIN2 (ENSMODG00000016041) #14	HDLBP (ENSMODG00000016033) #13
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000162454	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000162454	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000158551.k.b #11	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT00390000013662 #24	ENSGT00940000162454	ENSGT00940000161309	ENSGT00940000161858	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000159593	ENSGT00940000155387	ENSGT00730000111162
koala	MODERN SPECIES	33	MAB21L4 (ENSPCIG00000027355)	ENSPCIG00000027354 #7	SNED1 (ENSPCIG00000015443) #8	ENSPCIG00000015434 #9	ENSPCIG00000015415 #10	PPP1R7 (ENSPCIG00000015402) #11	HDLBP (ENSPCIG00000015375) #13	SEPTIN2 (ENSPCIG00000005866) #14	FARP2 (ENSPCIG00000005873) #15	STK25 (ENSPCIG00000005881) #16	BOK (ENSPCIG00000016583) #17	THAP4 (ENSPCIG00000016578) #18	ATG4B (ENSPCIG00000016576) #19	DTYMK (ENSPCIG00000016574) #20	ING5 (ENSPCIG00000016570) #21	D2HGDH (ENSPCIG00000016567) #22	GAL3ST2 (ENSPCIG00000032948) #23	ENSPCIG00000031792	ENSPCIG00000025273 #24	ENSPCIG00000025271	MROH2A (ENSPCIG00000025265)	RTP1 (ENSPCIG00000025264)	ENSPCIG00000025263	SST (ENSPCIG00000025262)	BCL6 (ENSPCIG00000025261)	ENSPCIG00000025259	LPP (ENSPCIG00000037471)	TPRG1 (ENSPCIG00000003993)	TP63 (ENSPCIG00000025324)
Common wonbat	MODERN SPECIES	1046	SNED1 (ENSVURG00010020936) #8	ENSVURG00010021080 #9	ENSVURG00010021082 #10	PPP1R7 (ENSVURG00010021089) #11	HDLBP (ENSVURG00010021098) #13	SEPTIN2 (ENSVURG00010021113) #14	FARP2 (ENSVURG00010021133) #15	ENSVURG00010021155	ENSVURG00010021157	STK25 (ENSVURG00010021165) #16	BOK (ENSVURG00010021188) #17	THAP4 (ENSVURG00010021195) #18	ATG4B (ENSVURG00010021203) #19	DTYMK (ENSVURG00010021210) #20	ING5 (ENSVURG00010021216) #21	D2HGDH (ENSVURG00010021224) #22	ENSVURG00010021230	GAL3ST2 (ENSVURG00010021234) #23	NEU4 (ENSVURG00010021251)	ENSVURG00010021355 #24	MROH2A (ENSVURG00010021359)	RTP1 (ENSVURG00010021374)	ENSVURG00010021379
Wallaby	MODERN SPECIES	8741																D2HGDH (ENSMEUG00000012733) #22
Tasmanian devil	MODERN SPECIES	2	MAB21L4 (ENSSHAG00000009675)	ENSSHAG00000010228 #7	SNED1 (ENSSHAG00000011201) #8	ENSSHAG00000011570 #10	PPP1R7 (ENSSHAG00000011977) #11	ANO7 (ENSSHAG00000012152) #12	HDLBP (ENSSHAG00000012422) #13	SEPTIN2 (ENSSHAG00000012877) #14	FARP2 (ENSSHAG00000013204) #15	STK25 (ENSSHAG00000013625) #16	BOK (ENSSHAG00000021893) #17	THAP4 (ENSSHAG00000002590) #18	ENSSHAG00000025437 #20	ATG4B (ENSSHAG00000025606) #19	ING5 (ENSSHAG00000021102) #21	D2HGDH (ENSSHAG00000016109) #22	GAL3ST2 (ENSSHAG00000015929) #23	ENSSHAG00000015765	ENSSHAG00000022224 #24	ENSSHAG00000015591	ENSSHAG00000015438	ENSSHAG00000015412	MASP1 (ENSSHAG00000015135)	SST (ENSSHAG00000028585)	ENSSHAG00000029604	LPP (ENSSHAG00000022243)	TPRG1 (ENSSHAG00000011287)	TP63 (ENSSHAG00000007507)	P3H2 (ENSSHAG00000006714)	CLDN1 (ENSSHAG00000001180)	CLDN16 (ENSSHAG00000028888)
Platypus	MODERN SPECIES	18	ENSOANG00000015608 #7	SNED1 (ENSOANG00000015610) #8	ENSOANG00000037263 #9	ENSOANG00000015612 #10	PPP1R7 (ENSOANG00000011761) #11	ANO7 (ENSOANG00000011760) #12	HDLBP (ENSOANG00000011759) #13	SEPTIN2 (ENSOANG00000011758) #14	FARP2 (ENSOANG00000011757) #15	STK25 (ENSOANG00000011756) #16	BOK (ENSOANG00000005633) #17	THAP4 (ENSOANG00000009842) #18	ATG4B (ENSOANG00000008758) #19	DTYMK (ENSOANG00000008759) #20	ING5 (ENSOANG00000049910) #21	D2HGDH (ENSOANG00000000857) #22	ENSOANG00000002250 #23	ENSOANG00000000858 #23	ENSOANG00000000861	ENSOANG00000031433 #24	MROH2A (ENSOANG00000000863)	RTP1 (ENSOANG00000000868)	MASP1 (ENSOANG00000000869)	SST (ENSOANG00000000871)	BCL6 (ENSOANG00000000872)	LPP (ENSOANG00000013793)	TPRG1 (ENSOANG00000013794)	TP63 (ENSOANG00000013795)	P3H2 (ENSOANG00000013797)	CLDN1 (ENSOANG00000013798)	CLDN16 (ENSOANG00000004452)
Sauria	ANCESTRAL SPECIES	9	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Lepidosauria	ANCESTRAL SPECIES	48	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00990000204467	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Laterata	ANCESTRAL SPECIES		ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00990000204467	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Common wall lizard	MODERN SPECIES	13	PASK (ENSPMRG00000015181) #10	ENSPMRG00000015155	ANO7 (ENSPMRG00000015095) #12	ENSPMRG00000015072	HDLBP (ENSPMRG00000015042) #13	FARP2 (ENSPMRG00000015029) #15	ENSPMRG00000015016 #15	STK25 (ENSPMRG00000015007) #16	BOK (ENSPMRG00000015001) #17	ENSPMRG00000014998	THAP4 (ENSPMRG00000014991) #18	ATG4B (ENSPMRG00000014984) #19	ENSPMRG00000014974 #20	ENSPMRG00000014971 #20	ING5 (ENSPMRG00000014968) #21	D2HGDH (ENSPMRG00000014960) #22	NEU4 (ENSPMRG00000014942)	TM4SF19 (ENSPMRG00000014930)	UBXN7 (ENSPMRG00000014921)	RNF168 (ENSPMRG00000014916)	SMCO1 (ENSPMRG00000014912)	WDR53 (ENSPMRG00000014908)	FBXO45 (ENSPMRG00000014905)	NRROS (ENSPMRG00000014901)	CEP19 (ENSPMRG00000014897)	PIGX (ENSPMRG00000014891)	PAK2 (ENSPMRG00000014879)	ENSPMRG00000014864	ENSPMRG00000014857 #23	ENSPMRG00000014851	RAB6B (ENSPMRG00000014846)
Argentine black and white tegu	MODERN SPECIES	19	SNED1 (ENSSMRG00000001025) #8	MTERF4 (ENSSMRG00000001006) #9	PASK (ENSSMRG00000000933) #10	ENSSMRG00000000907	ANO7 (ENSSMRG00000000753) #12	HDLBP (ENSSMRG00000000699) #13	SEPTIN2 (ENSSMRG00000000674) #14	FARP2 (ENSSMRG00000000645) #15	STK25 (ENSSMRG00000000539) #16	BOK (ENSSMRG00000000487) #17	ENSSMRG00000000469	THAP4 (ENSSMRG00000000460) #18	ATG4B (ENSSMRG00000000388) #19	DTYMK (ENSSMRG00000000297) #20	ING5 (ENSSMRG00000000278) #21	D2HGDH (ENSSMRG00000000238) #22	GAL3ST2 (ENSSMRG00000000236) #23	NEU4 (ENSSMRG00000000142)	TM4SF19 (ENSSMRG00000000072)	UBXN7 (ENSSMRG00000000052)	ENSSMRG00000000036	SMCO1 (ENSSMRG00000022211)	WDR53 (ENSSMRG00000022210)	FBXO45 (ENSSMRG00000022209)	NRROS (ENSSMRG00000022208)	PIGX (ENSSMRG00000022207)	CEP19 (ENSSMRG00000022206)	PAK2 (ENSSMRG00000022166)	ENSSMRG00000022165	ENSSMRG00000022164 #23	ENSSMRG00000022162
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00990000204467	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00990000204467	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00990000204467	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00990000204467	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Eastern brown snake	MODERN SPECIES	16	SNED1 (ENSPTXG00000000707) #8	MTERF4 (ENSPTXG00000000689) #9	ENSPTXG00000000683 #10	ENSPTXG00000000679	ANO7 (ENSPTXG00000000608) #12	HDLBP (ENSPTXG00000000584) #13	SEPTIN2 (ENSPTXG00000000570) #14	FARP2 (ENSPTXG00000000551) #15	STK25 (ENSPTXG00000000531) #16	BOK (ENSPTXG00000000525) #17	ENSPTXG00000000519	THAP4 (ENSPTXG00000000513) #18	ATG4B (ENSPTXG00000000499) #19	DTYMK (ENSPTXG00000000491) #20	ING5 (ENSPTXG00000000486) #21	D2HGDH (ENSPTXG00000000475) #22	GAL3ST2 (ENSPTXG00000000466) #23	NEU4 (ENSPTXG00000000312)	TM4SF19 (ENSPTXG00000000257)	UBXN7 (ENSPTXG00000000241)	RNF168 (ENSPTXG00000000224)	SMCO1 (ENSPTXG00000000202)	WDR53 (ENSPTXG00000000195)	FBXO45 (ENSPTXG00000000184)	NRROS (ENSPTXG00000000174)	CEP19 (ENSPTXG00000000167)	PIGX (ENSPTXG00000000151)	PAK2 (ENSPTXG00000000079)	ENSPTXG00000018859	ENSPTXG00000018858	ENSPTXG00000018857
Mainland tiger snake	MODERN SPECIES		MTERF4 (ENSNSUG00000013671) #9	ENSNSUG00000013669 #10	ENSNSUG00000013668	ANO7 (ENSNSUG00000013661) #12	HDLBP (ENSNSUG00000013655) #13	SEPTIN2 (ENSNSUG00000013653) #14	FARP2 (ENSNSUG00000013612) #15	STK25 (ENSNSUG00000013608) #16	BOK (ENSNSUG00000013607) #17	ENSNSUG00000013606	THAP4 (ENSNSUG00000013604) #18	ATG4B (ENSNSUG00000013508) #19	ENSNSUG00000013507 #20	ENSNSUG00000013506 #20	ING5 (ENSNSUG00000013504) #21	D2HGDH (ENSNSUG00000013503) #22	GAL3ST2 (ENSNSUG00000013502) #23	NEU4 (ENSNSUG00000013501)	TM4SF19 (ENSNSUG00000013500)	UBXN7 (ENSNSUG00000013499)	RNF168 (ENSNSUG00000013498)	SMCO1 (ENSNSUG00000013497)	WDR53 (ENSNSUG00000013496)	FBXO45 (ENSNSUG00000013495)	NRROS (ENSNSUG00000013494)	CEP19 (ENSNSUG00000013493)	ENSNSUG00000013492	PAK2 (ENSNSUG00000013491)	ENSNSUG00000013490	ENSNSUG00000013489	ENSNSUG00000013463
Blue-lipped sea krait	MODERN SPECIES	942									ENSLLTG00000001819	ENSLLTG00000001812	CFAP410 (ENSLLTG00000001805)	PFKL (ENSLLTG00000001059)	ATG4B (ENSLLTG00000000913) #19	DTYMK (ENSLLTG00000000897) #20	ING5 (ENSLLTG00000000882) #21	D2HGDH (ENSLLTG00000000865) #22
Indian cobra	MODERN SPECIES	3	SNED1 (ENSNNAG00000013357) #8	MTERF4 (ENSNNAG00000013269) #9	PASK (ENSNNAG00000013163) #10	ENSNNAG00000013125	ANO7 (ENSNNAG00000013009) #12	HDLBP (ENSNNAG00000012960) #13	SEPTIN2 (ENSNNAG00000012639) #14	FARP2 (ENSNNAG00000012506) #15	STK25 (ENSNNAG00000012467) #16	BOK (ENSNNAG00000012452) #17	ENSNNAG00000012442	THAP4 (ENSNNAG00000012429) #18	ATG4B (ENSNNAG00000012366) #19	DTYMK (ENSNNAG00000012343) #20	ING5 (ENSNNAG00000012325) #21	D2HGDH (ENSNNAG00000012317) #22	GAL3ST2 (ENSNNAG00000012292) #23	ENSNNAG00000012274	NEU4 (ENSNNAG00000012189)	ENSNNAG00000012163	UBXN7 (ENSNNAG00000012127)	RNF168 (ENSNNAG00000012102)	SMCO1 (ENSNNAG00000012090)	WDR53 (ENSNNAG00000012077)	FBXO45 (ENSNNAG00000012043)	NRROS (ENSNNAG00000012031)	CEP19 (ENSNNAG00000012014)	PIGX (ENSNNAG00000011997)	PAK2 (ENSNNAG00000011945)	ENSNNAG00000011924	LTF (ENSNNAG00000011035)
Lizard	MODERN SPECIES	2	PASK (ENSACAG00000001962) #10	ENSACAG00000001909	ANO7 (ENSACAG00000001789) #12	HDLBP (ENSACAG00000001556) #13	SEPTIN2 (ENSACAG00000001408) #14	FARP2 (ENSACAG00000001192) #15	STK25 (ENSACAG00000000971) #16	ENSACAG00000039196	ENSACAG00000040033	BOK (ENSACAG00000000919) #17	THAP4 (ENSACAG00000000876) #18	ENSACAG00000044488	ATG4B (ENSACAG00000000776) #19	DTYMK (ENSACAG00000000739) #20	ING5 (ENSACAG00000000665) #21	D2HGDH (ENSACAG00000000533) #22	GAL3ST2 (ENSACAG00000000492) #23	neu4 (ENSACAG00000000446)	TM4SF19 (ENSACAG00000000433)	UBXN7 (ENSACAG00000016312)	RNF168 (ENSACAG00000034899)	ENSACAG00000037121	WDR53 (ENSACAG00000016299)	FBXO45 (ENSACAG00000016292)	ENSACAG00000016291	CEP19 (ENSACAG00000016288)	PIGX (ENSACAG00000029652)	ENSACAG00000016263	ENSACAG00000016251	ENSACAG00000016246 #23	ENSACAG00000029241
tuatara	MODERN SPECIES	863																D2HGDH (ENSSPUG00000001996) #22	ENSSPUG00000001974
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Archosauria	ANCESTRAL SPECIES	48	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Aves	ANCESTRAL SPECIES	49	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b
Neognathae	ANCESTRAL SPECIES	9	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Galloanserae	ANCESTRAL SPECIES	33	ENSGT00940000162473	ENSGT00940000159035 #10	ENSGT00460000041648 #9	ENSGT00940000160730 #8	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT00940000157403	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Anatidae	ANCESTRAL SPECIES	29	ENSGT00940000158551.k.a #12	ENSGT00940000162473	ENSGT00940000159035 #10	ENSGT00460000041648 #9	ENSGT00940000160730 #8	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT00940000157403	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Pink-footed goose	MODERN SPECIES	71	ANO7 (ENSABRG00000019474) #12	ENSABRG00000019504	PASK (ENSABRG00000019573) #10	MTERF4 (ENSABRG00000019613) #9	SNED1 (ENSABRG00000019626) #8	MAB21L4 (ENSABRG00000019646)	AGXT (ENSABRG00000019657)	KIF1A (ENSABRG00000019705)	ILKAP (ENSABRG00000019991)	KLHL30 (ENSABRG00000020001)	ESPNL (ENSABRG00000020003)	THAP4 (ENSABRG00000020004) #18	ATG4B (ENSABRG00000020005) #19	DTYMK (ENSABRG00000020011) #20	ING5 (ENSABRG00000020014) #21	D2HGDH (ENSABRG00000020017) #22	GAL3ST2 (ENSABRG00000020035) #23	NEU4 (ENSABRG00000020042)	TM4SF19 (ENSABRG00000020048)	UBXN7 (ENSABRG00000020056)	RNF168 (ENSABRG00000020067)	WDR53 (ENSABRG00000020072)	FBXO45 (ENSABRG00000020074)	NRROS (ENSABRG00000020077)	CEP19 (ENSABRG00000020078)	ENSABRG00000020082	PAK2 (ENSABRG00000020084)	ENSABRG00000020089	ENSABRG00000020101 #23	LTF (ENSABRG00000020110)	ENSABRG00000020128
Duck	MODERN SPECIES	27	FARP2 (ENSAPLG00000011291) #15	SEPTIN2 (ENSAPLG00000011787) #14	HDLBP (ENSAPLG00000011984) #13	ANO7 (ENSAPLG00000012833) #12	ENSAPLG00000012987	PASK (ENSAPLG00000013106) #10	SNED1 (ENSAPLG00000013362) #8	ENSAPLG00000024920	ENSAPLG00000025841	ILKAP (ENSAPLG00000014934)	KLHL30 (ENSAPLG00000015233)	THAP4 (ENSAPLG00000015265) #18	ATG4B (ENSAPLG00000015334) #19	DTYMK (ENSAPLG00000026754) #20	ING5 (ENSAPLG00000013706) #21	D2HGDH (ENSAPLG00000014011) #22	GAL3ST2 (ENSAPLG00000014587) #23	NEU4 (ENSAPLG00000020688)	TM4SF19 (ENSAPLG00000015072)	UBXN7 (ENSAPLG00000015073)	RNF168 (ENSAPLG00000015285)	WDR53 (ENSAPLG00000015360)	FBXO45 (ENSAPLG00000015407)	NRROS (ENSAPLG00000015411)	CEP19 (ENSAPLG00000015449)	PIGX (ENSAPLG00000015450)	PAK2 (ENSAPLG00000015483)	ENSAPLG00000015781	ENSAPLG00000015784 #23	LTF (ENSAPLG00000015785)	ENSAPLG00000016555
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00900000141059 #13	ENSGT00940000162473	ENSGT00940000159035 #10	ENSGT00460000041648 #9	ENSGT00940000160730 #8	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT00940000157403	ENSGT00940000158597	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119.i
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00900000141059 #13	ENSGT00940000158551.k.b #11	ENSGT00940000159035 #10	ENSGT00460000041648 #9	ENSGT00940000160730 #8	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT00940000157403	ENSGT00940000158597	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119.i
Chicken	MODERN SPECIES	38	HDLBP (ENSGALG00010023338) #13	PPP1R7 (ENSGALG00010023332) #11	PASK (ENSGALG00010023299) #10	MTERF4 (ENSGALG00010025403) #9	SNED1 (ENSGALG00010025389) #8	MAB21L4 (ENSGALG00010024962)	AGXT (ENSGALG00010024959)	KIF1A (ENSGALG00010024946)	ILKAP (ENSGALG00010024937)	KLHL30 (ENSGALG00010024935)	ENSGALG00010024929	THAP4 (ENSGALG00010024928) #18	ATG4B (ENSGALG00010024918) #19	DTYMK (ENSGALG00010024900) #20	ING5 (ENSGALG00010024883) #21	D2HGDH (ENSGALG00010024879) #22	GAL3ST2 (ENSGALG00010024875) #23	NEU4 (ENSGALG00010024860)	TM4SF19 (ENSGALG00010024844)	UBXN7 (ENSGALG00010024825)	RNF168 (ENSGALG00010024813)	WDR53 (ENSGALG00010024804)	FBXO45 (ENSGALG00010024798)	NRROS (ENSGALG00010024795)	CEP19 (ENSGALG00010024781)	PIGX (ENSGALG00010024755)	PAK2 (ENSGALG00010024742)	AQP12A (ENSGALG00010024730)	ENSGALG00010024727 #23	TF (ENSGALG00010024717)	SRPRB (ENSGALG00010024714)
Turkey	MODERN SPECIES	2	ENSMGAG00000003010	TF (ENSMGAG00000003078)	ENSMGAG00000019705	ENSMGAG00000003154 #23	ENSMGAG00000003166	FBXO45 (ENSMGAG00000003238)	NRROS (ENSMGAG00000003232)	CEP19 (ENSMGAG00000003224)	PIGX (ENSMGAG00000003201)	ENSMGAG00000003252	ENSMGAG00000018260	ENSMGAG00000003332 #23	ENSMGAG00000003321	ENSMGAG00000003292	ENSMGAG00000003262	ENSMGAG00000003345 #22	ENSMGAG00000003364 #21	ENSMGAG00000017774 #20	ENSMGAG00000003390 #19	ENSMGAG00000022657	ENSMGAG00000003442 #18	ENSMGAG00000019835	ENSMGAG00000005462	ENSMGAG00000003460	ENSMGAG00000008597	ENSMGAG00000008634	ENSMGAG00000008664	ENSMGAG00000003584 #8	ENSMGAG00000003607 #10	ENSMGAG00000003650	ENSMGAG00000003686 #13
Japanese quail	MODERN SPECIES	27	ENSCJPG00005002206	PASK (ENSCJPG00005002204) #10	SNED1 (ENSCJPG00005002116) #8	MAB21L4 (ENSCJPG00005002089)	AGXT (ENSCJPG00005002074)	KIF1A (ENSCJPG00005001732)	ENSCJPG00005001707	ILKAP (ENSCJPG00005001698)	KLHL30 (ENSCJPG00005001693)	THAP4 (ENSCJPG00005001688) #18	ENSCJPG00005001683	ENSCJPG00005001678 #18	ATG4B (ENSCJPG00005001671) #19	DTYMK (ENSCJPG00005001666) #20	ING5 (ENSCJPG00005001656) #21	D2HGDH (ENSCJPG00005001651) #22	GAL3ST2 (ENSCJPG00005001643) #23	NEU4 (ENSCJPG00005001638)	TM4SF19 (ENSCJPG00005001630)	UBXN7 (ENSCJPG00005001388)	RNF168 (ENSCJPG00005001374)	WDR53 (ENSCJPG00005001369)	FBXO45 (ENSCJPG00005001364)	NRROS (ENSCJPG00005001359)	CEP19 (ENSCJPG00005001358)	ENSCJPG00005001354	ENSCJPG00005001352	ENSCJPG00005001345	ENSCJPG00005001313	ENSCJPG00005001305 #23	LTF (ENSCJPG00005001123)
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Golden eagle	MODERN SPECIES	1	FARP2 (ENSACCG00020006362) #15	STK25 (ENSACCG00020006340) #16	BOK (ENSACCG00020006323) #17	ETV5 (ENSACCG00020006267)	DGKG (ENSACCG00020006205)	ENSACCG00020006180	SUMO3 (ENSACCG00020006165)	UBE2G2 (ENSACCG00020006144)	TSPEAR (ENSACCG00020006103)	LRRC3 (ENSACCG00020006078)	TRPM2 (ENSACCG00020006040)	THAP4 (ENSACCG00020006021) #18	ATG4B (ENSACCG00020005995) #19	DTYMK (ENSACCG00020005969) #20	ING5 (ENSACCG00020005952) #21	D2HGDH (ENSACCG00020005925) #22	GAL3ST2 (ENSACCG00020005907) #23	NEU4 (ENSACCG00020005884)	TM4SF19 (ENSACCG00020005863)	UBXN7 (ENSACCG00020005823)	RNF168 (ENSACCG00020005790)	WDR53 (ENSACCG00020005777)	FBXO45 (ENSACCG00020005762)	NRROS (ENSACCG00020005756)	CEP19 (ENSACCG00020005735)	PIGX (ENSACCG00020005724)	PAK2 (ENSACCG00020005707)	ENSACCG00020005680	ENSACCG00020005650 #23	LTF (ENSACCG00020005622)	ENSACCG00020005597
Kakapo	MODERN SPECIES	25	STK25 (ENSSHBG00005019215) #16	BOK (ENSSHBG00005019219) #17	ETV5 (ENSSHBG00005019229)	DGKG (ENSSHBG00005019268)	ENSSHBG00005019709	SUMO3 (ENSSHBG00005019710)	UBE2G2 (ENSSHBG00005019713)	TSPEAR (ENSSHBG00005019721)	LRRC3 (ENSSHBG00005019730)	ENSSHBG00005019732	TRPM2 (ENSSHBG00005019743)	THAP4 (ENSSHBG00005019750) #18	ATG4B (ENSSHBG00005019753) #19	DTYMK (ENSSHBG00005019758) #20	ING5 (ENSSHBG00005019761) #21	D2HGDH (ENSSHBG00005019764) #22	GAL3ST2 (ENSSHBG00005019768) #23	NEU4 (ENSSHBG00005019771)	TM4SF19 (ENSSHBG00005019776)	UBXN7 (ENSSHBG00005000533)	RNF168 (ENSSHBG00005000535)	WDR53 (ENSSHBG00005010326)	FBXO45 (ENSSHBG00005010348)	NRROS (ENSSHBG00005010360)	DNAI3 (ENSSHBG00005010404)	MCOLN3 (ENSSHBG00005010500)	MCOLN2 (ENSSHBG00005010531)	LPAR3 (ENSSHBG00005010585)	SSX2IP (ENSSHBG00005010615)	ENSSHBG00005010730	ENSSHBG00005011058
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.a.a.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00990000204467	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.a.a.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.a.a.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119
Medium ground finch	MODERN SPECIES	83	SEPTIN2 (ENSGFOG00000000062) #14	FARP2 (ENSGFOG00000000057) #15	STK25 (ENSGFOG00000000044) #16	BOK (ENSGFOG00000014160) #17	ETV5 (ENSGFOG00000014156)	DGKG (ENSGFOG00000014148)	ENSGFOG00000014145	ENSGFOG00000014135	UBE2G2 (ENSGFOG00000014133)	TSPEAR (ENSGFOG00000014131)	TRPM2 (ENSGFOG00000014119)	THAP4 (ENSGFOG00000014109) #18	ATG4B (ENSGFOG00000014102) #19	DTYMK (ENSGFOG00000014094) #20	ING5 (ENSGFOG00000014091) #21	D2HGDH (ENSGFOG00000014089) #22	GAL3ST2 (ENSGFOG00000014088) #23	NEU4 (ENSGFOG00000014086)	TM4SF19 (ENSGFOG00000014084)	UBXN7 (ENSGFOG00000014083)	RNF168 (ENSGFOG00000014080)	WDR53 (ENSGFOG00000014079)	FBXO45 (ENSGFOG00000014077)	NRROS (ENSGFOG00000014075)	CEP19 (ENSGFOG00000014073)	PIGX (ENSGFOG00000014071)	PAK2 (ENSGFOG00000014069)	ENSGFOG00000014063	ENSGFOG00000014058 #23	LTF (ENSGFOG00000014052)	ENSGFOG00000014048
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000160680	ENSGT00940000156768	ENSGT00390000004977	ENSGT00950000182895.a.a.a.a.b	ENSGT00940000158193	ENSGT00510000047718	ENSGT00940000154360.A.b	ENSGT00940000156404	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d
Zebra finch	MODERN SPECIES	31	FARP2 (ENSTGUG00000006134) #15	STK25 (ENSTGUG00000006107) #16	BOK (ENSTGUG00000006098) #17	ETV5 (ENSTGUG00000006059)	DGKG (ENSTGUG00000006053)	ENSTGUG00000006048	ENSTGUG00000025998	UBE2G2 (ENSTGUG00000018863)	TSPEAR (ENSTGUG00000006025)	LRRC3 (ENSTGUG00000006022)	TRPM2 (ENSTGUG00000005963)	THAP4 (ENSTGUG00000005955) #18	ATG4B (ENSTGUG00000005940) #19	DTYMK (ENSTGUG00000005937) #20	ING5 (ENSTGUG00000005928) #21	D2HGDH (ENSTGUG00000005907) #22	GAL3ST2 (ENSTGUG00000005898) #23	NEU4 (ENSTGUG00000019131)	TM4SF19 (ENSTGUG00000005895)	UBXN7 (ENSTGUG00000005882)	RNF168 (ENSTGUG00000005879)	WDR53 (ENSTGUG00000020679)	FBXO45 (ENSTGUG00000027628)	NRROS (ENSTGUG00000005871)	CEP19 (ENSTGUG00000022483)	ENSTGUG00000020740	ENSTGUG00000005859	PAK2 (ENSTGUG00000005832)	ENSTGUG00000005831	ENSTGUG00000005823 #23	ENSTGUG00000023615
Common canary	MODERN SPECIES	10	AMMECR1L (ENSSCAG00000008762)	POLR2D (ENSSCAG00000008758)	WDR33 (ENSSCAG00000008715)	ENSSCAG00000008687	ENSSCAG00000008683	ENSSCAG00000008679	UBE2G2 (ENSSCAG00000008635)	TSPEAR (ENSSCAG00000008617)	LRRC3 (ENSSCAG00000008609)	TRPM2 (ENSSCAG00000008370)	ENSSCAG00000008302 #18	THAP4 (ENSSCAG00000008294) #18	ATG4B (ENSSCAG00000008031) #19	DTYMK (ENSSCAG00000008012) #20	ING5 (ENSSCAG00000008000) #21	D2HGDH (ENSSCAG00000007988) #22	GAL3ST2 (ENSSCAG00000007984) #23	NEU4 (ENSSCAG00000007982)	TM4SF19 (ENSSCAG00000007980)	UBXN7 (ENSSCAG00000007974)	RNF168 (ENSSCAG00000007972)	WDR53 (ENSSCAG00000007968)	FBXO45 (ENSSCAG00000007967)	NRROS (ENSSCAG00000007966)	CEP19 (ENSSCAG00000007963)	PIGX (ENSSCAG00000007961)	PAK2 (ENSSCAG00000007956)	ENSSCAG00000007950	ENSSCAG00000007945 #23	ENSSCAG00000007943	DGKG (ENSSCAG00000007938)
Flycatcher	MODERN SPECIES	28	FARP2 (ENSFALG00000003423) #15	STK25 (ENSFALG00000003418) #16	BOK (ENSFALG00000003408) #17	ENSFALG00000029014	ENSFALG00000003383	ENSFALG00000003364	ENSFALG00000003350	UBE2G2 (ENSFALG00000003340)	TSPEAR (ENSFALG00000003329)	LRRC3 (ENSFALG00000014513)	TRPM2 (ENSFALG00000003318)	THAP4 (ENSFALG00000003312) #18	ATG4B (ENSFALG00000003277) #19	DTYMK (ENSFALG00000003256) #20	ING5 (ENSFALG00000028331) #21	D2HGDH (ENSFALG00000003213) #22	GAL3ST2 (ENSFALG00000025391) #23	NEU4 (ENSFALG00000023218)	TM4SF19 (ENSFALG00000027610)	ENSFALG00000022967	UBXN7 (ENSFALG00000023973)	RNF168 (ENSFALG00000023716)	WDR53 (ENSFALG00000003141)	FBXO45 (ENSFALG00000023748)	NRROS (ENSFALG00000003124)	CEP19 (ENSFALG00000028051)	PIGX (ENSFALG00000003105)	ENSFALG00000003098	ENSFALG00000003091	ENSFALG00000026140 #23	ENSFALG00000003053
Great tit	MODERN SPECIES	29	RBP1 (ENSPMJG00000016513)	RBP2 (ENSPMJG00000016514)	COPB2 (ENSPMJG00000016515)	MRPS22 (ENSPMJG00000016516)	PIK3CB (ENSPMJG00000016518)	ENSPMJG00000016519	UBE2G2 (ENSPMJG00000016520)	TSPEAR (ENSPMJG00000016521)	LRRC3 (ENSPMJG00000016522)	TRPM2 (ENSPMJG00000016523)	THAP4 (ENSPMJG00000016524) #18	ENSPMJG00000016525	ATG4B (ENSPMJG00000016526) #19	DTYMK (ENSPMJG00000016527) #20	ING5 (ENSPMJG00000016528) #21	D2HGDH (ENSPMJG00000016529) #22	GAL3ST2 (ENSPMJG00000016530) #23	NEU4 (ENSPMJG00000016531)	TM4SF19 (ENSPMJG00000016532)	UBXN7 (ENSPMJG00000016533)	RNF168 (ENSPMJG00000016534)	WDR53 (ENSPMJG00000016535)	FBXO45 (ENSPMJG00000016536)	NRROS (ENSPMJG00000016537)	CEP19 (ENSPMJG00000016538)	PIGX (ENSPMJG00000016539)	PAK2 (ENSPMJG00000016540)	ENSPMJG00000016541	ENSPMJG00000016542 #23	LTF (ENSPMJG00000016544)	ENSPMJG00000016545
African ostrich	MODERN SPECIES	321										ENSSCUG00000004512	THAP4 (ENSSCUG00000004514) #18	ENSSCUG00000004519	ATG4B (ENSSCUG00000004523) #19	DTYMK (ENSSCUG00000004529) #20	ING5 (ENSSCUG00000004549) #21	D2HGDH (ENSSCUG00000004551) #22	ENSSCUG00000004555	GAL3ST2 (ENSSCUG00000004556) #23	NEU4 (ENSSCUG00000004559)	TM4SF19 (ENSSCUG00000004560)	UBXN7 (ENSSCUG00000004563)	RNF168 (ENSSCUG00000004567)	WDR53 (ENSSCUG00000004570)	FBXO45 (ENSSCUG00000004571)	NRROS (ENSSCUG00000004575)	CEP19 (ENSSCUG00000004579)	PIGX (ENSSCUG00000004583)	PAK2 (ENSSCUG00000004586)	ENSSCUG00000004592	ENSSCUG00000004596 #23	LTF (ENSSCUG00000004607)
Australian saltwater crocodile	MODERN SPECIES	48	EFHD1 (ENSCPRG00005009720)	PASK (ENSCPRG00005009702) #10	ENSCPRG00005009690	ANO7 (ENSCPRG00005009673) #12	HDLBP (ENSCPRG00005009637) #13	SEPTIN2 (ENSCPRG00005009622) #14	FARP2 (ENSCPRG00005009604) #15	STK25 (ENSCPRG00005009602) #16	BOK (ENSCPRG00005009598) #17	ENSCPRG00005009594 #18	ENSCPRG00005009591 #18	ATG4B (ENSCPRG00005009583) #19	ENSCPRG00005009578 #20	ENSCPRG00005009571 #20	ING5 (ENSCPRG00005009567) #21	D2HGDH (ENSCPRG00005009564) #22	GAL3ST2 (ENSCPRG00005009561) #23	NEU4 (ENSCPRG00005009553)	TM4SF19 (ENSCPRG00005009550)	UBXN7 (ENSCPRG00005009545)	RNF168 (ENSCPRG00005009543)	SMCO1 (ENSCPRG00005009542)	WDR53 (ENSCPRG00005009540)	FBXO45 (ENSCPRG00005009539)	NRROS (ENSCPRG00005009536)	CEP19 (ENSCPRG00005009535)	PIGX (ENSCPRG00005009530)	PAK2 (ENSCPRG00005009523)	ENSCPRG00005009514	ENSCPRG00005009505 #23	LTF (ENSCPRG00005009494)
Cryptodira	ANCESTRAL SPECIES	37	ENSGT00940000162689 #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00940000162689 #7	ENSGT00940000160730.g #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Emydidae	ANCESTRAL SPECIES	3	ENSGT01050000244976.b.b.b.a.a.b	ENSGT00940000160730.g #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
painted turtle	MODERN SPECIES	983					ENSCPBG00000002485 #12	HDLBP (ENSCPBG00000002442) #13	SEPTIN2 (ENSCPBG00000002410) #14	FARP2 (ENSCPBG00000002320) #15	STK25 (ENSCPBG00000002280) #16	ENSCPBG00000002250	BOK (ENSCPBG00000002235) #17	THAP4 (ENSCPBG00000002196) #18	ATG4B (ENSCPBG00000002176) #19	DTYMK (ENSCPBG00000002159) #20	ING5 (ENSCPBG00000002147) #21	D2HGDH (ENSCPBG00000002124) #22
Three-toed box turtle	MODERN SPECIES	384		SNED1 (ENSTMTG00000011231) #8	MTERF4 (ENSTMTG00000011101) #9	PASK (ENSTMTG00000010968) #10	ENSTMTG00000010932	ANO7 (ENSTMTG00000010587) #12	HDLBP (ENSTMTG00000010501) #13	SEPTIN2 (ENSTMTG00000010461) #14	FARP2 (ENSTMTG00000010397) #15	STK25 (ENSTMTG00000010360) #16	BOK (ENSTMTG00000010344) #17	THAP4 (ENSTMTG00000010312) #18	ATG4B (ENSTMTG00000010290) #19	DTYMK (ENSTMTG00000010279) #20	ING5 (ENSTMTG00000010268) #21	D2HGDH (ENSTMTG00000010256) #22	GAL3ST2 (ENSTMTG00000010235) #23	NEU4 (ENSTMTG00000010165)	TM4SF19 (ENSTMTG00000010116)	UBXN7 (ENSTMTG00000010094)	RNF168 (ENSTMTG00000010072)	SMCO1 (ENSTMTG00000010057)	WDR53 (ENSTMTG00000010043)	FBXO45 (ENSTMTG00000010034)	NRROS (ENSTMTG00000010021)	CEP19 (ENSTMTG00000010000)	PIGX (ENSTMTG00000009980)	ENSTMTG00000009964	PAK2 (ENSTMTG00000009932)	ENSTMTG00000009894	ENSTMTG00000009866 #23
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00940000162689 #7	ENSGT00940000160730.g #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00950000182923.B.a #23	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d	ENSGT00940000156055	ENSGT00940000159656
Abingdon island giant tortoise	MODERN SPECIES	128						ENSCABG00000020993	RELN (ENSCABG00000020979)	FARP2 (ENSCABG00000020968) #15	STK25 (ENSCABG00000020959) #16	BOK (ENSCABG00000020956) #17	THAP4 (ENSCABG00000020953) #18	ENSCABG00000020951 #18	ATG4B (ENSCABG00000020875) #19	DTYMK (ENSCABG00000020870) #20	ING5 (ENSCABG00000020868) #21	D2HGDH (ENSCABG00000020867) #22
Goode s thornscrub tortoise	MODERN SPECIES	23	SNED1 (ENSGEVG00005004926) #8	MTERF4 (ENSGEVG00005004909) #9	PASK (ENSGEVG00005004788) #10	ENSGEVG00005004738	ENSGEVG00005004686	ANO7 (ENSGEVG00005004568) #12	HDLBP (ENSGEVG00005004373) #13	SEPTIN2 (ENSGEVG00005004304) #14	FARP2 (ENSGEVG00005004190) #15	STK25 (ENSGEVG00005004130) #16	BOK (ENSGEVG00005004117) #17	THAP4 (ENSGEVG00005020267) #18	ATG4B (ENSGEVG00005020250) #19	DTYMK (ENSGEVG00005020241) #20	ING5 (ENSGEVG00005020237) #21	D2HGDH (ENSGEVG00005020232) #22	GAL3ST2 (ENSGEVG00005020227) #23	NEU4 (ENSGEVG00005020219)	TM4SF19 (ENSGEVG00005020212)	UBXN7 (ENSGEVG00005020209)	RNF168 (ENSGEVG00005020205)	SMCO1 (ENSGEVG00005020202)	WDR53 (ENSGEVG00005020198)	FBXO45 (ENSGEVG00005020196)	NRROS (ENSGEVG00005020191)	CEP19 (ENSGEVG00005020190)	PIGX (ENSGEVG00005020188)	PAK2 (ENSGEVG00005020183)	ENSGEVG00005020177	ENSGEVG00005020172 #23	LTF (ENSGEVG00005020162)
Chinese turtle	MODERN SPECIES	78							HDLBP (ENSPSIG00000010068) #13	SEPTIN2 (ENSPSIG00000009642) #14	FARP2 (ENSPSIG00000008274) #15	STK25 (ENSPSIG00000007529) #16	BOK (ENSPSIG00000007482) #17	THAP4 (ENSPSIG00000006771) #18	ATG4B (ENSPSIG00000010954) #19	DTYMK (ENSPSIG00000010377) #20	ING5 (ENSPSIG00000010017) #21	D2HGDH (ENSPSIG00000009298) #22	GAL3ST2 (ENSPSIG00000009143) #23
Anura	ANCESTRAL SPECIES	13	ENSGT00940000162689.b #7	ENSGT00940000160730 #8	ENSGT00460000041648 #9	ENSGT00940000159035 #10	ENSGT00940000162473	ENSGT00940000158551.k.a #12	ENSGT00900000141059 #13	ENSGT00940000155098 #14	ENSGT00940000158642 #15	ENSGT00940000153476.a #16	ENSGT01090000260100.B #17	ENSGT00940000158447 #18	ENSGT00530000063000.a.b.b #19	ENSGT00940000154030.a.a #20	ENSGT00940000158159 #21	ENSGT00550000075086 #22	ENSGT00940000159041	ENSGT00940000154505.B	ENSGT00940000165072	ENSGT00720000108834	ENSGT00940000157247	ENSGT01100000263537.b.a.a.b.a	ENSGT00730000111130	ENSGT00440000037733	ENSGT00390000010397.b	ENSGT00390000004912	ENSGT00940000157731	ENSGT00970000193372.b	ENSGT00390000010895	ENSGT00390000013776	ENSGT00940000155954.a
Frog	MODERN SPECIES	5	awat1 (ENSXETG00000033126)	KCNE4 (ENSXETG00000047756)	scg2 (ENSXETG00000002939)	ap1s3 (ENSXETG00000045809)	polr2d (ENSXETG00000002955)	wdfy1 (ENSXETG00000033169)	AMMECR1L (ENSXETG00000002956)	oxsr1 (ENSXETG00000002957)	wdr33 (ENSXETG00000002960)	gpr17 (ENSXETG00000046161)	MYO7B (ENSXETG00000032898)	iws1 (ENSXETG00000002963)	proc.2 (ENSXETG00000030091)	proc (ENSXETG00000002964)	dgkd (ENSXETG00000030286)	d2hgdh (ENSXETG00000033115) #22	ing5 (ENSXETG00000002976) #21	dtymk (ENSXETG00000002980) #20	atg4b (ENSXETG00000002981) #19	stk25 (ENSXETG00000002989) #18	ENSXETG00000036369	bok (ENSXETG00000031956) #17	FARP2 (ENSXETG00000034178) #15	septin2 (ENSXETG00000012166) #14	hdlbp (ENSXETG00000012164) #13	ppp1r7 (ENSXETG00000012163)	pask (ENSXETG00000032412) #10	lamtor3-like (ENSXETG00000026765)	mterf4 (ENSXETG00000032078) #9	sned1 (ENSXETG00000033664) #8	ENSXETG00000012154 #7
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000007514	ENSLLEG00000007524	ENSLLEG00000007530	ANO7 (ENSLLEG00000007546) #12	ENSLLEG00000007657 #13	SEPTIN2 (ENSLLEG00000007852) #14	FARP2 (ENSLLEG00000008133) #15	ENSLLEG00000008333	STK25 (ENSLLEG00000008393) #16	BOK (ENSLLEG00000009025) #17	ENSLLEG00000009080	THAP4 (ENSLLEG00000009125) #18	ATG4B (ENSLLEG00000009394) #19	DTYMK (ENSLLEG00000009631) #20	ING5 (ENSLLEG00000009744) #21	D2HGDH (ENSLLEG00000009840) #22	ENSLLEG00000009927	DGKD (ENSLLEG00000009983)	EIF1AX (ENSLLEG00000010886)	ENSLLEG00000011057	IWS1 (ENSLLEG00000011952)	MYO7B (ENSLLEG00000012163)	GPR17 (ENSLLEG00000012521)	WDR33 (ENSLLEG00000012545)	SAP130 (ENSLLEG00000012774)	ENSLLEG00000014062	AMMECR1L (ENSLLEG00000014102)	WDFY1 (ENSLLEG00000014308)	AP1S3 (ENSLLEG00000014394)	ENSLLEG00000014523	SCG2 (ENSLLEG00000014548)
Coelacanth	MODERN SPECIES	3522																D2HGDH (ENSLACG00000003203) #22