Vertebrata ANCESTRAL SPECIES ENSGT00440000033958 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00440000033958 #22 Euteleostomi ANCESTRAL SPECIES 52 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00960000189798 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.b.a ##34 ENSGT00940000175089 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00960000189798 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.b.a ##34 ENSGT00940000175089 Tetrapoda ANCESTRAL SPECIES 14 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00960000189798 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Amniota ANCESTRAL SPECIES 22 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00960000189798 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Mammalia ANCESTRAL SPECIES 18 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973 #11 ENSGT00390000017740.a.b #10 Theria ANCESTRAL SPECIES 28 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973 #11 ENSGT00390000017740.a.b #10 Eutheria ANCESTRAL SPECIES 14 ENSGT00950000183014.f.b.a.b ENSGT00390000007219 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000153973.c.a.a ##11 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Primates ANCESTRAL SPECIES 1 ENSGT00390000007219 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Haplorrhini ANCESTRAL SPECIES 52 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Simiiformes ANCESTRAL SPECIES 1 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.a ##11 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000153973.c.a.a ##11 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.a ##11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.a ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000153973.c.a.a ##11 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.a ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 Vervet Monkey MODERN SPECIES 14 MKRN2 (ENSCSAG00000009754) #7 RAF1 (ENSCSAG00000009721) #8 TMEM40 (ENSCSAG00000009604) #9 CAND2 (ENSCSAG00000009557) #10 RPL32 (ENSCSAG00000009485) #11 IQSEC1 (ENSCSAG00000009482) #12 NUP210 (ENSCSAG00000009474) #13 HDAC11 (ENSCSAG00000009462) #14 FBLN2 (ENSCSAG00000009449) #15 WNT7A (ENSCSAG00000009439) #16 CHCHD4 (ENSCSAG00000009431) #17 TMEM43 (ENSCSAG00000009426) #18 XPC (ENSCSAG00000009411) #19 SLC6A6 (ENSCSAG00000009391) #20 GRIP2 (ENSCSAG00000009353) #21 CCDC174 (ENSCSAG00000009294) #22 C3orf20 (ENSCSAG00000009277) #23 FGD5 (ENSCSAG00000009224) #24 NR2C2 (ENSCSAG00000009209) #25 MRPS25 (ENSCSAG00000009193) #26 RBSN (ENSCSAG00000009184) #27 TRH (ENSCSAG00000009163) #28 TMCC1 (ENSCSAG00000009154) #29 PLXND1 (ENSCSAG00000009144) #30 H1-8 (ENSCSAG00000009112) #31 RHO (ENSCSAG00000009088) #32 IFT122 (ENSCSAG00000009059) #33 MBD4 (ENSCSAG00000009037) #34 EFCAB12 (ENSCSAG00000009011) #35 H1-10 (ENSCSAG00000018811) #36 HMCES (ENSCSAG00000008979) #37 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000153973.c.a.a.e.b ##11 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.a ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 Macaca ANCESTRAL SPECIES 5 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.b.a.a ##11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.a ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 Macaca_a ANCESTRAL SPECIES 5 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.a.e.b ##11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.b ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.r ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Crab-eating macaque MODERN SPECIES 11 TMEM40 (ENSMFAG00000039365) #9 CAND2 (ENSMFAG00000044298) #10 ENSMFAG00000045190 ##11 IQSEC1 (ENSMFAG00000043873) #12 NUP210 (ENSMFAG00000044461) #13 ENSMFAG00000058794 HDAC11 (ENSMFAG00000036363) #14 FBLN2 (ENSMFAG00000003835) #15 WNT7A (ENSMFAG00000044809) #16 ENSMFAG00000044351 ##17 TMEM43 (ENSMFAG00000047872) #18 XPC (ENSMFAG00000031847) #19 LSM3 (ENSMFAG00000063615) SLC6A6 (ENSMFAG00000038570) #20 GRIP2 (ENSMFAG00000035973) #21 CCDC174 (ENSMFAG00000042348) #22 C3orf20 (ENSMFAG00000029993) #23 FGD5 (ENSMFAG00000045664) #24 ENSMFAG00000051869 NR2C2 (ENSMFAG00000045119) #25 MRPS25 (ENSMFAG00000035383) #26 RBSN (ENSMFAG00000052478) #27 TRH (ENSMFAG00000042203) #28 TMCC1 (ENSMFAG00000045092) #29 PLXND1 (ENSMFAG00000000589) #30 ENSMFAG00000056765 ENSMFAG00000017755 RHO (ENSMFAG00000004044) #32 IFT122 (ENSMFAG00000030257) #33 ENSMFAG00000040136 #35 HMCES (ENSMFAG00000032291) #37 Rhesus MODERN SPECIES 11 RAF1 (ENSMMUG00000007450) #8 TMEM40 (ENSMMUG00000010276) #9 CAND2 (ENSMMUG00000001339) #10 RPL32 (ENSMMUG00000001340) ##11 IQSEC1 (ENSMMUG00000001342) #12 NUP210 (ENSMMUG00000015979) #13 ENSMMUG00000056487 HDAC11 (ENSMMUG00000001369) #14 FBLN2 (ENSMMUG00000017659) #15 WNT7A (ENSMMUG00000018445) #16 XPC (ENSMMUG00000023125) #19 TMEM43 (ENSMMUG00000023124) #18 SLC6A6 (ENSMMUG00000006340) #20 GRIP2 (ENSMMUG00000006342) #21 ENSMMUG00000062011 CCDC174 (ENSMMUG00000044822) #22 C2H3orf20 (ENSMMUG00000014780) #23 FGD5 (ENSMMUG00000018446) #24 NR2C2 (ENSMMUG00000005156) #25 MRPS25 (ENSMMUG00000064556) #26 RBSN (ENSMMUG00000005158) #27 TRH (ENSMMUG00000046670) #28 TMCC1 (ENSMMUG00000016793) #29 PLXND1 (ENSMMUG00000012737) #30 H1-8 (ENSMMUG00000012736) #31 RHO (ENSMMUG00000055315) #32 IFT122 (ENSMMUG00000012727) #33 ENSMMUG00000062379 MBD4 (ENSMMUG00000012723) #34 EFCAB12 (ENSMMUG00000012721) #35 ENSMMUG00000063541 Pig-tailed macaque MODERN SPECIES 546 CAND2 (ENSMNEG00000044168) #10 RPL32 (ENSMNEG00000030893) ##11 IQSEC1 (ENSMNEG00000042270) #12 ENSMNEG00000029455 NUP210 (ENSMNEG00000041495) #13 HDAC11 (ENSMNEG00000040546) #14 FBLN2 (ENSMNEG00000035537) #15 WNT7A (ENSMNEG00000037464) #16 ENSMNEG00000040402 ##17 TMEM43 (ENSMNEG00000032802) #18 XPC (ENSMNEG00000038400) #19 ENSMNEG00000043632 SLC6A6 (ENSMNEG00000040859) #20 GRIP2 (ENSMNEG00000044173) #21 ENSMNEG00000008483 CCDC174 (ENSMNEG00000042119) #22 C3orf20 (ENSMNEG00000041322) #23 FGD5 (ENSMNEG00000029420) #24 ENSMNEG00000006121 NR2C2 (ENSMNEG00000030133) #25 MRPS25 (ENSMNEG00000034531) #26 RBSN (ENSMNEG00000044914) #27 TRH (ENSMNEG00000030919) #28 TMCC1 (ENSMNEG00000040170) #29 PLXND1 (ENSMNEG00000036132) #30 H1-8 (ENSMNEG00000045142) #31 RHO (ENSMNEG00000038092) #32 IFT122 (ENSMNEG00000041458) #33 MBD4 (ENSMNEG00000029752) #34 EFCAB12 (ENSMNEG00000030732) #35 H1-10 (ENSMNEG00000025518) #36 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153973.c.a.a.d ##11 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.a ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 ENSGT00390000018439 #37 Olive baboon MODERN SPECIES 11 TMEM40 (ENSPANG00000014208) #9 CAND2 (ENSPANG00000018464) #10 ENSPANG00000007693 ##11 IQSEC1 (ENSPANG00000006877) #12 NUP210 (ENSPANG00000006878) #13 HDAC11 (ENSPANG00000024163) #14 ENSPANG00000047403 #15 ENSPANG00000007694 #15 WNT7A (ENSPANG00000046909) #16 CHCHD4 (ENSPANG00000025946) ##17 TMEM43 (ENSPANG00000012906) #18 XPC (ENSPANG00000004175) #19 LSM3 (ENSPANG00000009378) SLC6A6 (ENSPANG00000009556) #20 GRIP2 (ENSPANG00000010990) #21 CCDC174 (ENSPANG00000021119) #22 C3orf20 (ENSPANG00000018820) #23 FGD5 (ENSPANG00000012066) #24 NR2C2 (ENSPANG00000005929) #25 MRPS25 (ENSPANG00000029339) #26 RBSN (ENSPANG00000016555) #27 TRH (ENSPANG00000009555) #28 TMCC1 (ENSPANG00000022860) #29 PLXND1 (ENSPANG00000005560) #30 H1-8 (ENSPANG00000017383) #31 RHO (ENSPANG00000008230) #32 IFT122 (ENSPANG00000006164) #33 MBD4 (ENSPANG00000015047) #34 H1-10 (ENSPANG00000018283) #36 HMCES (ENSPANG00000012065) #37 COPG1 (ENSPANG00000018819) Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.a ##17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 ENSGT00390000018439 #37 Sooty mangabey MODERN SPECIES 650 TMEM40 (ENSCATG00000027847) #9 CAND2 (ENSCATG00000038720) #10 RPL32 (ENSCATG00000038198) #11 IQSEC1 (ENSCATG00000037864) #12 NUP210 (ENSCATG00000035260) #13 HDAC11 (ENSCATG00000026123) #14 FBLN2 (ENSCATG00000038061) #15 ENSCATG00000033105 WNT7A (ENSCATG00000033711) #16 TMEM43 (ENSCATG00000038308) #18 XPC (ENSCATG00000036725) #19 ENSCATG00000039421 SLC6A6 (ENSCATG00000027535) #20 GRIP2 (ENSCATG00000030249) #21 ENSCATG00000022779 CCDC174 (ENSCATG00000029674) #22 C3orf20 (ENSCATG00000037971) #23 FGD5 (ENSCATG00000034854) #24 NR2C2 (ENSCATG00000040182) #25 MRPS25 (ENSCATG00000042651) #26 RBSN (ENSCATG00000029332) #27 TRH (ENSCATG00000030883) #28 TMCC1 (ENSCATG00000017209) #29 PLXND1 (ENSCATG00000041419) #30 H1-8 (ENSCATG00000040635) #31 RHO (ENSCATG00000038589) #32 IFT122 (ENSCATG00000017582) #33 MBD4 (ENSCATG00000035211) #34 EFCAB12 (ENSCATG00000038259) #35 H1-10 (ENSCATG00000002340) #36 HMCES (ENSCATG00000040383) #37 Drill MODERN SPECIES 874 TMEM40 (ENSMLEG00000039986) #9 CAND2 (ENSMLEG00000034596) #10 RPL32 (ENSMLEG00000033655) ##11 IQSEC1 (ENSMLEG00000035708) #12 NUP210 (ENSMLEG00000038717) #13 HDAC11 (ENSMLEG00000038310) #14 FBLN2 (ENSMLEG00000040866) #15 WNT7A (ENSMLEG00000042427) #16 ENSMLEG00000031201 ##17 TMEM43 (ENSMLEG00000035818) #18 XPC (ENSMLEG00000041682) #19 LSM3 (ENSMLEG00000036162) SLC6A6 (ENSMLEG00000040687) #20 GRIP2 (ENSMLEG00000029206) #21 ENSMLEG00000026453 CCDC174 (ENSMLEG00000029107) #22 C3orf20 (ENSMLEG00000028837) #23 FGD5 (ENSMLEG00000035795) #24 NR2C2 (ENSMLEG00000044042) #25 MRPS25 (ENSMLEG00000031574) #26 RBSN (ENSMLEG00000041788) #27 TRH (ENSMLEG00000022774) #28 ENSMLEG00000036386 #29 Rhinopithecus ANCESTRAL SPECIES 35 ENSGT00390000012433.a.a.b ENSGT00390000012433.a.b ENSGT00940000160852 ENSGT00940000159121 ENSGT00940000162133 ENSGT00940000159901 ENSGT00390000002849.r ENSGT00510000047486 ENSGT00940000159923 ENSGT00390000018302 ENSGT00940000158362 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 ENSGT00390000018439 #37 Golden snub-nosed monkey MODERN SPECIES 2280 ENSRROG00000042275 CCDC174 (ENSRROG00000031345) #22 C3orf20 (ENSRROG00000044103) #23 FGD5 (ENSRROG00000031500) #24 NR2C2 (ENSRROG00000041550) #25 MRPS25 (ENSRROG00000034718) #26 RBSN (ENSRROG00000015856) #27 TRH (ENSRROG00000030136) #28 ENSRROG00000044977 TMCC1 (ENSRROG00000027034) #29 PLXND1 (ENSRROG00000002091) #30 H1-8 (ENSRROG00000037123) #31 RHO (ENSRROG00000033776) #32 IFT122 (ENSRROG00000044243) #33 MBD4 (ENSRROG00000029136) #34 EFCAB12 (ENSRROG00000039253) #35 Black snub-nosed monkey MODERN SPECIES 1271 HDAC11 (ENSRBIG00000030119) #14 FBLN2 (ENSRBIG00000037929) #15 WNT7A (ENSRBIG00000043591) #16 ENSRBIG00000029034 ##17 TMEM43 (ENSRBIG00000032236) #18 XPC (ENSRBIG00000027884) #19 ENSRBIG00000034399 SLC6A6 (ENSRBIG00000029514) #20 GRIP2 (ENSRBIG00000040208) #21 ENSRBIG00000037898 CCDC174 (ENSRBIG00000036299) #22 LRRC4 (ENSRBIG00000001277) ENSRBIG00000028651 LEP (ENSRBIG00000043909) RBM28 (ENSRBIG00000033990) PRRT4 (ENSRBIG00000043786) IMPDH1 (ENSRBIG00000030944) HILPDA (ENSRBIG00000027583) GARIN1A (ENSRBIG00000039139) GARIN1B (ENSRBIG00000030558) CALU (ENSRBIG00000032938) OPN1SW (ENSRBIG00000037951) ##32 CCDC136 (ENSRBIG00000044440) FLNC (ENSRBIG00000026980) ATP6V1F (ENSRBIG00000042625) ATP6V1FNB (ENSRBIG00000008769) Hominoidea ANCESTRAL SPECIES 2 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.a ##11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.d #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583.i #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 Hominidae ANCESTRAL SPECIES 2 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.a ##11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.d #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583.i #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00910000147988 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.d #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583.i #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000155892 ENSGT00390000018500.b ENSGT00950000182802.B.a.a.a.a.h.a.a.a.a ENSGT00940000156679 ENSGT00390000017724.a.a ENSGT00940000157248 ENSGT00940000156802 ENSGT00390000013823.a ENSGT00950000182908.C Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.d #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583.i #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000155892 ENSGT00390000018500.b ENSGT00940000156679 ENSGT00390000017724.a.a ENSGT00940000157248 ENSGT00940000156802 ENSGT00390000013823.a ENSGT00950000182908.C ENSGT00940000160808 Pan ANCESTRAL SPECIES 2 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.a ##11 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.q.a.d #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583.i #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00910000148131 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000155892 ENSGT00390000018500.b ENSGT00940000156679 ENSGT00390000017724.a.a ENSGT00940000157248 ENSGT00940000156802 ENSGT00390000013823.a ENSGT00950000182908.C ENSGT00940000160808 Chimpanzee MODERN SPECIES 16 CAND2 (ENSPTRG00000014637) #10 ENSPTRG00000050657 ##11 IQSEC1 (ENSPTRG00000014639) #12 ENSPTRG00000046540 NUP210 (ENSPTRG00000014640) #13 HDAC11 (ENSPTRG00000014641) #14 FBLN2 (ENSPTRG00000014642) #15 WNT7A (ENSPTRG00000046824) #16 CHCHD4 (ENSPTRG00000014647) #17 TMEM43 (ENSPTRG00000014648) #18 XPC (ENSPTRG00000014649) #19 LSM3 (ENSPTRG00000014650) SLC6A6 (ENSPTRG00000014651) #20 GRIP2 (ENSPTRG00000047094) #21 ENSPTRG00000048798 CCDC174 (ENSPTRG00000014654) #22 C3H3orf20 (ENSPTRG00000014655) #23 FGD5 (ENSPTRG00000014656) #24 NR2C2 (ENSPTRG00000014657) #25 MRPS25 (ENSPTRG00000014658) #26 RBSN (ENSPTRG00000014659) #27 CAPN7 (ENSPTRG00000014661) SH3BP5 (ENSPTRG00000014662) ENSPTRG00000051176 METTL6 (ENSPTRG00000030297) EAF1 (ENSPTRG00000014665) COLQ (ENSPTRG00000030295) HACL1 (ENSPTRG00000014667) BTD (ENSPTRG00000014668) ANKRD28 (ENSPTRG00000030292) GALNT15 (ENSPTRG00000014670) Bonobo MODERN SPECIES 16 RPL32 (ENSPPAG00000008188) #11 IQSEC1 (ENSPPAG00000036448) #12 ENSPPAG00000028546 NUP210 (ENSPPAG00000037715) #13 HDAC11 (ENSPPAG00000037567) #14 FBLN2 (ENSPPAG00000015671) #15 WNT7A (ENSPPAG00000030187) #16 CHCHD4 (ENSPPAG00000032925) #17 TMEM43 (ENSPPAG00000000804) #18 XPC (ENSPPAG00000043453) #19 LSM3 (ENSPPAG00000034074) ENSPPAG00000036305 SLC6A6 (ENSPPAG00000042007) #20 GRIP2 (ENSPPAG00000041847) #21 ENSPPAG00000033481 CCDC174 (ENSPPAG00000038422) #22 C3orf20 (ENSPPAG00000041311) #23 FGD5 (ENSPPAG00000025764) #24 ENSPPAG00000042214 NR2C2 (ENSPPAG00000023138) #25 MRPS25 (ENSPPAG00000039324) #26 RBSN (ENSPPAG00000038220) #27 CAPN7 (ENSPPAG00000032807) SH3BP5 (ENSPPAG00000038360) METTL6 (ENSPPAG00000039377) EAF1 (ENSPPAG00000039271) COLQ (ENSPPAG00000031635) HACL1 (ENSPPAG00000042783) BTD (ENSPPAG00000035833) ANKRD28 (ENSPPAG00000041736) GALNT15 (ENSPPAG00000039833) Human MODERN SPECIES 15 TMEM40 (ENSG00000088726) #9 CAND2 (ENSG00000144712) #10 ENSG00000289809 RPL32 (ENSG00000144713) #11 IQSEC1 (ENSG00000144711) #12 NUP210 (ENSG00000132182) #13 HDAC11 (ENSG00000163517) #14 FBLN2 (ENSG00000163520) #15 WNT7A (ENSG00000154764) #16 CHCHD4 (ENSG00000163528) #17 TMEM43 (ENSG00000170876) #18 XPC (ENSG00000154767) #19 LSM3 (ENSG00000170860) SLC6A6 (ENSG00000131389) #20 GRIP2 (ENSG00000144596) #21 CCDC174 (ENSG00000154781) #22 C3orf20 (ENSG00000131379) #23 FGD5 (ENSG00000154783) #24 NR2C2 (ENSG00000177463) #25 MRPS25 (ENSG00000131368) #26 RBSN (ENSG00000131381) #27 CAPN7 (ENSG00000131375) SH3BP5 (ENSG00000131370) METTL6 (ENSG00000206562) EAF1 (ENSG00000144597) COLQ (ENSG00000206561) HACL1 (ENSG00000131373) BTD (ENSG00000169814) ANKRD28 (ENSG00000206560) GALNT15 (ENSG00000131386) DPH3 (ENSG00000154813) Gorilla MODERN SPECIES 16 CAND2 (ENSGGOG00000001004) #10 RPL32 (ENSGGOG00000043568) ##11 IQSEC1 (ENSGGOG00000001008) #12 NUP210 (ENSGGOG00000015096) #13 HDAC11 (ENSGGOG00000007735) #14 FBLN2 (ENSGGOG00000011561) #15 ENSGGOG00000042871 WNT7A (ENSGGOG00000012654) #16 CHCHD4 (ENSGGOG00000024077) #17 TMEM43 (ENSGGOG00000016577) #18 XPC (ENSGGOG00000009997) #19 LSM3 (ENSGGOG00000010006) SLC6A6 (ENSGGOG00000013384) #20 GRIP2 (ENSGGOG00000002279) #21 ENSGGOG00000038061 CCDC174 (ENSGGOG00000001359) #22 C3orf20 (ENSGGOG00000001361) #23 FGD5 (ENSGGOG00000001365) #24 ENSGGOG00000044014 #25 MRPS25 (ENSGGOG00000011005) #26 RBSN (ENSGGOG00000012784) #27 CAPN7 (ENSGGOG00000025671) SH3BP5 (ENSGGOG00000001667) ENSGGOG00000023889 METTL6 (ENSGGOG00000024436) EAF1 (ENSGGOG00000004453) COLQ (ENSGGOG00000004457) HACL1 (ENSGGOG00000010802) BTD (ENSGGOG00000013932) ANKRD28 (ENSGGOG00000009548) GALNT15 (ENSGGOG00000009285) Orangutan MODERN SPECIES 16 RAF1 (ENSPPYG00000013388) #8 TMEM40 (ENSPPYG00000013389) #9 CAND2 (ENSPPYG00000013390) #10 ENSPPYG00000037343 ##11 IQSEC1 (ENSPPYG00000013393) #12 NUP210 (ENSPPYG00000013394) #13 HDAC11 (ENSPPYG00000013395) #14 FBLN2 (ENSPPYG00000013396) #15 WNT7A (ENSPPYG00000013397) #16 CHCHD4 (ENSPPYG00000025890) #17 TMEM43 (ENSPPYG00000013400) #18 XPC (ENSPPYG00000013401) #19 LSM3 (ENSPPYG00000013402) SLC6A6 (ENSPPYG00000013403) #20 GRIP2 (ENSPPYG00000013404) #21 CCDC174 (ENSPPYG00000013405) #22 C3orf20 (ENSPPYG00000013406) #23 FGD5 (ENSPPYG00000013407) #24 NR2C2 (ENSPPYG00000013408) #25 MRPS25 (ENSPPYG00000032891) #26 RBSN (ENSPPYG00000013410) #27 TRH (ENSPPYG00000013411) #28 TMCC1 (ENSPPYG00000013412) #29 PLXND1 (ENSPPYG00000013413) #30 ENSPPYG00000013414 RHO (ENSPPYG00000013415) #32 IFT122 (ENSPPYG00000013416) #33 MBD4 (ENSPPYG00000013417) #34 EFCAB12 (ENSPPYG00000013418) #35 H1-10 (ENSPPYG00000013420) #36 HMCES (ENSPPYG00000013421) #37 Gibbon MODERN SPECIES 13 TMEM40 (ENSNLEG00000004755) #9 CAND2 (ENSNLEG00000004774) #10 ENSNLEG00000035616 ##11 ENSNLEG00000004798 IQSEC1 (ENSNLEG00000004793) #12 NUP210 (ENSNLEG00000004799) #13 HDAC11 (ENSNLEG00000004853) #14 FBLN2 (ENSNLEG00000004881) #15 ENSNLEG00000004941 #16 CHCHD4 (ENSNLEG00000029809) #17 TMEM43 (ENSNLEG00000004956) #18 XPC (ENSNLEG00000005000) #19 LSM3 (ENSNLEG00000005079) SLC6A6 (ENSNLEG00000005084) #20 GRIP2 (ENSNLEG00000005114) #21 CCDC174 (ENSNLEG00000005142) #22 C3orf20 (ENSNLEG00000005161) #23 FGD5 (ENSNLEG00000005177) #24 NR2C2 (ENSNLEG00000005193) #25 MRPS25 (ENSNLEG00000031537) #26 RBSN (ENSNLEG00000005222) #27 TRH (ENSNLEG00000005245) #28 TMCC1 (ENSNLEG00000005249) #29 PLXND1 (ENSNLEG00000005261) #30 H1-8 (ENSNLEG00000005285) #31 RHO (ENSNLEG00000005288) #32 IFT122 (ENSNLEG00000005298) #33 MBD4 (ENSNLEG00000005337) #34 EFCAB12 (ENSNLEG00000005355) #35 H1-10 (ENSNLEG00000019298) #36 HMCES (ENSNLEG00000014523) #37 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00390000017740.a.b #10 ENSGT00940000158890.q ENSGT00940000153973.c.a.b.a.b ##11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.p #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 ENSGT00390000018439 #37 Cebidae ANCESTRAL SPECIES 14 ENSGT00390000017740.a.b #10 ENSGT00940000158890.q ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.p #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 ENSGT00390000018439 #37 Cebidae_a ANCESTRAL SPECIES 47 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.p #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00910000146921 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00730000111536 #36 ENSGT00390000018439 #37 Capuchin MODERN SPECIES 332 NUP210 (ENSCCAG00000023331) #13 HDAC11 (ENSCCAG00000036510) #14 FBLN2 (ENSCCAG00000020396) #15 WNT7A (ENSCCAG00000031285) #16 CHCHD4 (ENSCCAG00000018934) #17 TMEM43 (ENSCCAG00000021194) #18 XPC (ENSCCAG00000021946) #19 ENSCCAG00000036499 SLC6A6 (ENSCCAG00000024571) #20 GRIP2 (ENSCCAG00000023870) #21 ENSCCAG00000021896 CCDC174 (ENSCCAG00000030530) #22 C3orf20 (ENSCCAG00000025317) #23 FGD5 (ENSCCAG00000034009) #24 NR2C2 (ENSCCAG00000028267) #25 MRPS25 (ENSCCAG00000029293) #26 RBSN (ENSCCAG00000015545) #27 TRH (ENSCCAG00000025977) #28 TMCC1 (ENSCCAG00000034223) #29 PLXND1 (ENSCCAG00000026590) #30 H1-8 (ENSCCAG00000028548) #31 RHO (ENSCCAG00000003711) #32 IFT122 (ENSCCAG00000034647) #33 MBD4 (ENSCCAG00000029796) #34 EFCAB12 (ENSCCAG00000037525) #35 Bolivian squirrel monkey MODERN SPECIES 59 CAND2 (ENSSBOG00000030427) #10 ENSSBOG00000020027 ##11 IQSEC1 (ENSSBOG00000033593) #12 NUP210 (ENSSBOG00000030291) #13 HDAC11 (ENSSBOG00000030160) #14 FBLN2 (ENSSBOG00000033203) #15 WNT7A (ENSSBOG00000023765) #16 CHCHD4 (ENSSBOG00000023461) #17 TMEM43 (ENSSBOG00000022802) #18 XPC (ENSSBOG00000022446) #19 ENSSBOG00000024310 SLC6A6 (ENSSBOG00000029944) #20 GRIP2 (ENSSBOG00000004102) #21 ENSSBOG00000029285 ENSSBOG00000024640 CCDC174 (ENSSBOG00000020532) #22 C3orf20 (ENSSBOG00000031678) #23 FGD5 (ENSSBOG00000035174) #24 NR2C2 (ENSSBOG00000024072) #25 ENSSBOG00000035105 #26 RBSN (ENSSBOG00000029767) #27 TRH (ENSSBOG00000032057) #28 TMCC1 (ENSSBOG00000032556) #29 PLXND1 (ENSSBOG00000025455) #30 H1-8 (ENSSBOG00000020996) #31 RHO (ENSSBOG00000020736) #32 IFT122 (ENSSBOG00000035867) #33 MBD4 (ENSSBOG00000016810) #34 EFCAB12 (ENSSBOG00000024520) #35 H1-10 (ENSSBOG00000019873) #36 HMCES (ENSSBOG00000023491) #37 Marmoset MODERN SPECIES 6 CAND2 (ENSCJAG00000016770) #10 ENSCJAG00000061647 IQSEC1 (ENSCJAG00000016781) #12 NUP210 (ENSCJAG00000016795) #13 HDAC11 (ENSCJAG00000016844) #14 FBLN2 (ENSCJAG00000016873) #15 WNT7A (ENSCJAG00000040771) #16 TMEM43 (ENSCJAG00000016924) #18 ENSCJAG00000072125 ENSCJAG00000087072 #17 XPC (ENSCJAG00000016952) #19 ENSCJAG00000042664 ENSCJAG00000079599 SLC6A6 (ENSCJAG00000016992) #20 GRIP2 (ENSCJAG00000017014) #21 CCDC174 (ENSCJAG00000017045) #22 C3orf20 (ENSCJAG00000017083) #23 FGD5 (ENSCJAG00000017099) #24 NR2C2 (ENSCJAG00000017131) #25 ENSCJAG00000058001 MRPS25 (ENSCJAG00000017160) #26 RBSN (ENSCJAG00000017163) #27 TRH (ENSCJAG00000047087) #28 ENSCJAG00000021040 TMCC1 (ENSCJAG00000017178) #29 PLXND1 (ENSCJAG00000005429) #30 ENSCJAG00000017209 #31 RHO (ENSCJAG00000017195) #32 ENSCJAG00000076224 ENSCJAG00000087235 #31 IFT122 (ENSCJAG00000017213) #33 Mas night monkey MODERN SPECIES 321 RAF1 (ENSANAG00000031934) #8 TMEM40 (ENSANAG00000036821) #9 CAND2 (ENSANAG00000020366) #10 ENSANAG00000020589 ##11 IQSEC1 (ENSANAG00000028368) #12 NUP210 (ENSANAG00000036448) #13 HDAC11 (ENSANAG00000035737) #14 FBLN2 (ENSANAG00000027135) #15 WNT7A (ENSANAG00000033071) #16 CHCHD4 (ENSANAG00000034814) #17 TMEM43 (ENSANAG00000036418) #18 XPC (ENSANAG00000021069) #19 LSM3 (ENSANAG00000034627) SLC6A6 (ENSANAG00000025733) #20 GRIP2 (ENSANAG00000037475) #21 CCDC174 (ENSANAG00000036650) #22 C3orf20 (ENSANAG00000020657) #23 FGD5 (ENSANAG00000021931) #24 ENSANAG00000019989 NR2C2 (ENSANAG00000037853) #25 MRPS25 (ENSANAG00000036121) #26 RBSN (ENSANAG00000022849) #27 ENSANAG00000022989 TRH (ENSANAG00000024416) #28 TMCC1 (ENSANAG00000024697) #29 PLXND1 (ENSANAG00000037480) #30 ENSANAG00000026706 #31 RHO (ENSANAG00000032928) #32 IFT122 (ENSANAG00000033342) #33 MBD4 (ENSANAG00000005085) #34 EFCAB12 (ENSANAG00000028408) #35 Tarsier MODERN SPECIES 5178 GRIP2 (ENSTSYG00000007847) #21 CCDC174 (ENSTSYG00000008623) #22 C3orf20 (ENSTSYG00000012522) #23 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Bushbaby MODERN SPECIES 216 ACAD9 (ENSOGAG00000013506) IQSEC1 (ENSOGAG00000013504) #12 NUP210 (ENSOGAG00000001970) #13 HDAC11 (ENSOGAG00000007254) #14 FBLN2 (ENSOGAG00000007260) #15 ENSOGAG00000024558 WNT7A (ENSOGAG00000031005) #16 ENSOGAG00000029241 ENSOGAG00000031349 ENSOGAG00000002784 #17 TMEM43 (ENSOGAG00000007653) #18 XPC (ENSOGAG00000024108) #19 ENSOGAG00000007659 SLC6A6 (ENSOGAG00000002891) #20 GRIP2 (ENSOGAG00000002892) #21 CCDC174 (ENSOGAG00000013264) #22 C3orf20 (ENSOGAG00000013270) #23 FGD5 (ENSOGAG00000013279) #24 NR2C2 (ENSOGAG00000014038) #25 MRPS25 (ENSOGAG00000014041) #26 RBSN (ENSOGAG00000014042) #27 TRH (ENSOGAG00000017199) #28 ENSOGAG00000031381 TMCC1 (ENSOGAG00000010283) #29 ENSOGAG00000032612 PLXND1 (ENSOGAG00000010266) #30 RHO (ENSOGAG00000010259) #32 IFT122 (ENSOGAG00000010245) #33 MBD4 (ENSOGAG00000010236) #34 ENSOGAG00000010234 #35 RPL32 (ENSOGAG00000028498) ##11 Lemuriformes ANCESTRAL SPECIES 113 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 Lemuriformes_a ANCESTRAL SPECIES 275 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 Greater bamboo lemur MODERN SPECIES 258 CCDC174 (ENSPSMG00000018031) #22 Coquerels sifaka MODERN SPECIES 748 SLC6A6 (ENSPCOG00000014886) #20 GRIP2 (ENSPCOG00000015711) #21 CCDC174 (ENSPCOG00000014779) #22 C3orf20 (ENSPCOG00000016668) #23 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Tree shrew MODERN SPECIES 4227 ENSTBEG00000014177 #22 ENSTBEG00000014372 #23 Glires ANCESTRAL SPECIES 2 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.b ENSGT01030000234553.b.b.d.c.b.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Lagomorpha ANCESTRAL SPECIES 105 ENSGT01030000234553.b.b.d.d ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 ENSGT00390000017740.a.b #10 Rabbit MODERN SPECIES 20 ORYCUNV1R1532 (ENSOCUG00000031321) ORYCUNV1R1621 (ENSOCUG00000028079) ORYCUNV1R1511 (ENSOCUG00000032956) ORYCUNV1R1540 (ENSOCUG00000032812) XPC (ENSOCUG00000011079) #19 ORYCUNV1R1507 (ENSOCUG00000031825) ORYCUNV1R1638 (ENSOCUG00000035671) ORYCUNV1R1541 (ENSOCUG00000031125) ORYCUNV1R1632 (ENSOCUG00000033938) ORYCUNV1R1524 (ENSOCUG00000027158) CHCHD4 (ENSOCUG00000023806) #17 TMEM43 (ENSOCUG00000011074) #18 ENSOCUG00000011088 SLC6A6 (ENSOCUG00000001144) #20 GRIP2 (ENSOCUG00000001145) #21 CCDC174 (ENSOCUG00000008451) #22 ENSOCUG00000039627 #23 ENSOCUG00000015577 #23 ENSOCUG00000025023 FGD5 (ENSOCUG00000006961) #24 NR2C2 (ENSOCUG00000006975) #25 MRPS25 (ENSOCUG00000006984) #26 RBSN (ENSOCUG00000006988) #27 TRH (ENSOCUG00000006337) #28 TMCC1 (ENSOCUG00000013071) #29 PLXND1 (ENSOCUG00000013049) #30 ENSOCUG00000029379 RHO (ENSOCUG00000013036) #32 IFT122 (ENSOCUG00000013015) #33 MBD4 (ENSOCUG00000013006) #34 ENSOCUG00000012999 #35 Pika MODERN SPECIES 1101 SLC6A6 (ENSOPRG00000005084) #20 GRIP2 (ENSOPRG00000005104) #21 CCDC174 (ENSOPRG00000005155) #22 Rodentia ANCESTRAL SPECIES 2 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.b ENSGT01030000234553.b.b.d.c.b.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.b.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.a.a.a ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Myomorpha ANCESTRAL SPECIES 36 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.a.a.a.b ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.a ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Muroidea ANCESTRAL SPECIES 37 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.a.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958.a #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958.a #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00940000159882 Chinese hamster chok1gshd MODERN SPECIES 144 Slc41a3 (ENSCGRG00001010264) Iqsec1 (ENSCGRG00001001080) #12 ENSCGRG00001020283 Nup210 (ENSCGRG00001004330) #13 Hdac11 (ENSCGRG00001018847) #14 Fbln2 (ENSCGRG00001005743) #15 Wnt7a (ENSCGRG00001010427) #16 ENSCGRG00001011855 ENSCGRG00001016456 ENSCGRG00001017374 #17 Tmem43 (ENSCGRG00001001263) #18 Xpc (ENSCGRG00001014190) #19 Lsm3 (ENSCGRG00001017598) Slc6a6 (ENSCGRG00001019005) #20 Grip2 (ENSCGRG00001021106) #21 Ccdc174 (ENSCGRG00001021754) #22 4930590J08Rik (ENSCGRG00001017889) #23 Fgd5 (ENSCGRG00001013433) #24 Nr2c2 (ENSCGRG00001009601) #25 Mrps25 (ENSCGRG00001016556) #26 Rbsn (ENSCGRG00001018030) #27 Trh (ENSCGRG00001019768) #28 Prickle2 (ENSCGRG00001005583) Adamts9 (ENSCGRG00001014518) Magi1 (ENSCGRG00001004939) Slc25a26 (ENSCGRG00001000286) Lrig1 (ENSCGRG00001020436) Kbtbd8 (ENSCGRG00001004948) ENSCGRG00001004433 Suclg2 (ENSCGRG00001011522) Tafa1 (ENSCGRG00001014933) Golden Hamster MODERN SPECIES 643 Uroc1 (ENSMAUG00000003968) Zxdc (ENSMAUG00000019913) Cfap100 (ENSMAUG00000018814) Klf15 (ENSMAUG00000005299) ENSMAUG00000014077 Slc41a3 (ENSMAUG00000015587) Iqsec1 (ENSMAUG00000005597) #12 Nup210 (ENSMAUG00000012897) #13 Hdac11 (ENSMAUG00000005003) #14 Fbln2 (ENSMAUG00000021684) #15 Wnt7a (ENSMAUG00000016536) #16 Chchd4 (ENSMAUG00000021415) #17 Tmem43 (ENSMAUG00000021795) #18 Xpc (ENSMAUG00000019920) #19 Grip2 (ENSMAUG00000013630) #21 Ccdc174 (ENSMAUG00000010944) #22 4930590J08Rik (ENSMAUG00000015114) #23 Fgd5 (ENSMAUG00000015411) #24 Nr2c2 (ENSMAUG00000016840) #25 Rbsn (ENSMAUG00000010240) #27 Trh (ENSMAUG00000016316) #28 Prickle2 (ENSMAUG00000013569) Adamts9 (ENSMAUG00000021440) ENSMAUG00000010107 Magi1 (ENSMAUG00000021226) ENSMAUG00000004998 Slc25a26 (ENSMAUG00000021604) Lrig1 (ENSMAUG00000007470) Kbtbd8 (ENSMAUG00000017081) ENSMAUG00000009672 Suclg2 (ENSMAUG00000021321) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958.a #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Prairie vole MODERN SPECIES 84 Cfap100 (ENSMOCG00000021845) Klf15 (ENSMOCG00000022079) Aldh1l1 (ENSMOCG00000003909) Slc41a3 (ENSMOCG00000017752) Iqsec1 (ENSMOCG00000000442) #12 Nup210 (ENSMOCG00000009601) #13 Hdac11 (ENSMOCG00000000173) #14 Fbln2 (ENSMOCG00000009900) #15 Wnt7a (ENSMOCG00000007580) #16 Chchd4 (ENSMOCG00000019774) #17 Tmem43 (ENSMOCG00000000687) #18 Xpc (ENSMOCG00000002947) #19 Lsm3 (ENSMOCG00000014269) Slc6a6 (ENSMOCG00000016250) #20 Grip2 (ENSMOCG00000015042) #21 ENSMOCG00000019764 #22 ENSMOCG00000020723 #22 4930590J08Rik (ENSMOCG00000001932) #23 Fgd5 (ENSMOCG00000018507) #24 Nr2c2 (ENSMOCG00000006010) #25 Mrps25 (ENSMOCG00000000775) #26 ENSMOCG00000020109 Trh (ENSMOCG00000020778) #28 Prickle2 (ENSMOCG00000009205) Adamts9 (ENSMOCG00000020918) Magi1 (ENSMOCG00000021420) Slc25a26 (ENSMOCG00000012219) Lrig1 (ENSMOCG00000016641) Kbtbd8 (ENSMOCG00000014034) ENSMOCG00000017135 Suclg2 (ENSMOCG00000019822) Northern American deer mouse MODERN SPECIES 16 Slc41a3 (ENSPEMG00000011388) Iqsec1 (ENSPEMG00000014627) #12 Nup210 (ENSPEMG00000018996) #13 Hdac11 (ENSPEMG00000012425) #14 Fbln2 (ENSPEMG00000000066) #15 Wnt7a (ENSPEMG00000029574) #16 Vmn1r54 (ENSPEMG00000028564) ENSPEMG00000031025 ENSPEMG00000025082 Chchd4 (ENSPEMG00000012767) #17 Tmem43 (ENSPEMG00000013314) #18 Xpc (ENSPEMG00000015475) #19 ENSPEMG00000015797 Slc6a6 (ENSPEMG00000016693) #20 Grip2 (ENSPEMG00000009285) #21 Ccdc174 (ENSPEMG00000011995) #22 4930590J08Rik (ENSPEMG00000016805) #23 Fgd5 (ENSPEMG00000005651) #24 Mrps25 (ENSPEMG00000015595) #26 Rbsn (ENSPEMG00000026045) #27 Trh (ENSPEMG00000027938) #28 Prickle2 (ENSPEMG00000008467) Adamts9 (ENSPEMG00000001414) Magi1 (ENSPEMG00000018842) ENSPEMG00000029600 Slc25a26 (ENSPEMG00000016974) Lrig1 (ENSPEMG00000013717) ENSPEMG00000007390 ENSPEMG00000030152 Suclg2 (ENSPEMG00000017086) Tafa1 (ENSPEMG00000004313) Cricetidae ANCESTRAL SPECIES ENSGT00440000033958.b #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00440000033958.b #22 Prairie vole MODERN SPECIES 84 Klf15 (ENSMOCG00000022079) Aldh1l1 (ENSMOCG00000003909) Slc41a3 (ENSMOCG00000017752) Iqsec1 (ENSMOCG00000000442) #12 Nup210 (ENSMOCG00000009601) #13 Hdac11 (ENSMOCG00000000173) #14 Fbln2 (ENSMOCG00000009900) #15 Wnt7a (ENSMOCG00000007580) #16 Chchd4 (ENSMOCG00000019774) #17 Tmem43 (ENSMOCG00000000687) #18 Xpc (ENSMOCG00000002947) #19 Lsm3 (ENSMOCG00000014269) Slc6a6 (ENSMOCG00000016250) #20 Grip2 (ENSMOCG00000015042) #21 ENSMOCG00000019764 #22 ENSMOCG00000020723 #22 4930590J08Rik (ENSMOCG00000001932) #23 Fgd5 (ENSMOCG00000018507) #24 Nr2c2 (ENSMOCG00000006010) #25 Mrps25 (ENSMOCG00000000775) #26 ENSMOCG00000020109 Trh (ENSMOCG00000020778) #28 Prickle2 (ENSMOCG00000009205) Adamts9 (ENSMOCG00000020918) Magi1 (ENSMOCG00000021420) Slc25a26 (ENSMOCG00000012219) Lrig1 (ENSMOCG00000016641) Kbtbd8 (ENSMOCG00000014034) ENSMOCG00000017135 Suclg2 (ENSMOCG00000019822) Tafa1 (ENSMOCG00000005890) Murinae ANCESTRAL SPECIES 4 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Mus ANCESTRAL SPECIES 12 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Mus_A DUPLICATION Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES 7 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958.c.a #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Mus_B ANCESTRAL SPECIES 15 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958.c.a #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a ENSGT00940000162607 ENSGT00440000035348.l Mouse MODERN SPECIES 15 Cfap100 (ENSMUSG00000048794) Klf15 (ENSMUSG00000030087) Aldh1l1 (ENSMUSG00000030088) Slc41a3 (ENSMUSG00000030089) Iqsec1 (ENSMUSG00000034312) #12 Nup210 (ENSMUSG00000030091) #13 Hdac11 (ENSMUSG00000034245) #14 Fbln2 (ENSMUSG00000064080) #15 Wnt7a (ENSMUSG00000030093) #16 Chchd4 (ENSMUSG00000034203) #17 Tmem43 (ENSMUSG00000030095) #18 Xpc (ENSMUSG00000030094) #19 Lsm3 (ENSMUSG00000034192) Slc6a6 (ENSMUSG00000030096) #20 Grip2 (ENSMUSG00000030098) #21 Ccdc174 (ENSMUSG00000034083) #22 4930590J08Rik (ENSMUSG00000034063) #23 Fgd5 (ENSMUSG00000034037) #24 Nr2c2 (ENSMUSG00000005893) #25 Mrps25 (ENSMUSG00000014551) #26 Rbsn (ENSMUSG00000014550) #27 Trh (ENSMUSG00000005892) #28 Prickle2 (ENSMUSG00000030020) Adamts9 (ENSMUSG00000030022) Magi1 (ENSMUSG00000045095) Slc25a26 (ENSMUSG00000045100) Lrig1 (ENSMUSG00000030029) Kbtbd8 (ENSMUSG00000030031) Suclg2 (ENSMUSG00000061838) Tafa1 (ENSMUSG00000059187) Nup50l (ENSMUSG00000072878) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000153110.A ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.i #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958.c.a #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00860000136292 ENSGT00860000136051 ENSGT00940000155820 ENSGT00550000074950 ENSGT00940000158502 ENSGT00940000158653 ENSGT00390000010170.a.a Steppe mouse MODERN SPECIES 3230 Cfap100 (ENSMSIG00000008087) Klf15 (ENSMSIG00000008149) Aldh1l1 (ENSMSIG00000008168) Slc41a3 (ENSMSIG00000008250) Iqsec1 (ENSMSIG00000008326) #12 Nup210 (ENSMSIG00000008561) #13 ENSMSIG00000008823 #14 Fbln2 (ENSMSIG00000008879) #15 Wnt7a (ENSMSIG00000008956) #16 Chchd4 (ENSMSIG00000008979) #17 Tmem43 (ENSMSIG00000009012) #18 Xpc (ENSMSIG00000009045) #19 Lsm3 (ENSMSIG00000009153) Slc6a6 (ENSMSIG00000009201) #20 Grip2 (ENSMSIG00000009391) #21 Ccdc174 (ENSMSIG00000009644) #22 4930590J08Rik (ENSMSIG00000009662) #23 Fgd5 (ENSMSIG00000009754) #24 Nr2c2 (ENSMSIG00000009847) #25 Mrps25 (ENSMSIG00000009916) #26 Rbsn (ENSMSIG00000009926) #27 Trh (ENSMSIG00000009965) #28 ENSMSIG00000009984 Prickle2 (ENSMSIG00000009992) ENSMSIG00000010030 Adamts9 (ENSMSIG00000010039) ENSMSIG00000010285 Mus_A ANCESTRAL SPECIES ENSGT00440000033958.c.b #22 Ryukyu mouse MODERN SPECIES 15 BC048671 (MGP_CAROLIEiJ_G0028641) MGP_CAROLIEiJ_G0028642 Uroc1 (MGP_CAROLIEiJ_G0028643) Zxdc (MGP_CAROLIEiJ_G0028644) Cfap100 (MGP_CAROLIEiJ_G0028645) Klf15 (MGP_CAROLIEiJ_G0028646) MGP_CAROLIEiJ_G0028647 Iqsec1 (MGP_CAROLIEiJ_G0028648) #12 Nup210 (MGP_CAROLIEiJ_G0028649) #13 Hdac11 (MGP_CAROLIEiJ_G0028650) #14 Fbln2 (MGP_CAROLIEiJ_G0028651) #15 Wnt7a (MGP_CAROLIEiJ_G0028652) #16 MGP_CAROLIEiJ_G0028655 #19 Slc6a6 (MGP_CAROLIEiJ_G0028656) #20 MGP_CAROLIEiJ_G0028657 #21 MGP_CAROLIEiJ_G0028658 #22 4930590J08Rik (MGP_CAROLIEiJ_G0028659) #23 Fgd5 (MGP_CAROLIEiJ_G0028660) #24 Nr2c2 (MGP_CAROLIEiJ_G0028661) #25 Mrps25 (MGP_CAROLIEiJ_G0028662) #26 Rbsn (MGP_CAROLIEiJ_G0028663) #27 Trh (MGP_CAROLIEiJ_G0028664) #28 Prickle2 (MGP_CAROLIEiJ_G0028665) Adamts9 (MGP_CAROLIEiJ_G0028666) MGP_CAROLIEiJ_G0028667 Magi1 (MGP_CAROLIEiJ_G0028668) Slc25a26 (MGP_CAROLIEiJ_G0028669) Lrig1 (MGP_CAROLIEiJ_G0028670) Kbtbd8 (MGP_CAROLIEiJ_G0028671) Suclg2 (MGP_CAROLIEiJ_G0028672) MGP_CAROLIEiJ_G0028673 Mus_B ANCESTRAL SPECIES ENSGT00440000033958.c.b #22 Mus_C ANCESTRAL SPECIES ENSGT00440000033958.c.b #22 Steppe mouse MODERN SPECIES 2994 Lama4 (ENSMSIG00000001276) Fam229b (ENSMSIG00000001215) Tube1 (ENSMSIG00000001171) Ccn6 (ENSMSIG00000001159) ENSMSIG00000001142 ENSMSIG00000001131 Fyn (ENSMSIG00000001064) Traf3ip2 (ENSMSIG00000001008) ENSMSIG00000000979 #22 Rev3l (ENSMSIG00000000767) ENSMSIG00000000716 ENSMSIG00000000705 ENSMSIG00000000678 ENSMSIG00000000663 Mfsd4b5 (ENSMSIG00000000610) Mfsd4b1 (ENSMSIG00000000578) Slc16a10 (ENSMSIG00000000537) ENSMSIG00000000467 ENSMSIG00000000433 ENSMSIG00000000270 ENSMSIG00000000163 Mus_A ANCESTRAL SPECIES ENSGT00440000033958.d #22 Mus_B ANCESTRAL SPECIES ENSGT00440000033958.d #22 Mus_C ANCESTRAL SPECIES ENSGT00440000033958.d #22 spretus MODERN SPECIES 15 Cfap100 (MGP_SPRETEiJ_G0029669) Klf15 (MGP_SPRETEiJ_G0029670) Aldh1l1 (MGP_SPRETEiJ_G0029671) Slc41a3 (MGP_SPRETEiJ_G0029672) Iqsec1 (MGP_SPRETEiJ_G0029673) #12 Nup210 (MGP_SPRETEiJ_G0029674) #13 Hdac11 (MGP_SPRETEiJ_G0029675) #14 Fbln2 (MGP_SPRETEiJ_G0029676) #15 Wnt7a (MGP_SPRETEiJ_G0029677) #16 Chchd4 (MGP_SPRETEiJ_G0029678) #17 Tmem43 (MGP_SPRETEiJ_G0029679) #18 Xpc (MGP_SPRETEiJ_G0029680) #19 Lsm3 (MGP_SPRETEiJ_G0029681) MGP_SPRETEiJ_G0029682 #20 Grip2 (MGP_SPRETEiJ_G0029683) #21 Ccdc174 (MGP_SPRETEiJ_G0029684) #22 4930590J08Rik (MGP_SPRETEiJ_G0029685) #23 Fgd5 (MGP_SPRETEiJ_G0029686) #24 Nr2c2 (MGP_SPRETEiJ_G0029687) #25 Mrps25 (MGP_SPRETEiJ_G0029688) #26 Rbsn (MGP_SPRETEiJ_G0029689) #27 Trh (MGP_SPRETEiJ_G0029690) #28 Prickle2 (MGP_SPRETEiJ_G0029691) Adamts9 (MGP_SPRETEiJ_G0029692) MGP_SPRETEiJ_G0029693 MGP_SPRETEiJ_G0029694 Magi1 (MGP_SPRETEiJ_G0029695) Slc25a26 (MGP_SPRETEiJ_G0029696) Lrig1 (MGP_SPRETEiJ_G0029697) Kbtbd8 (MGP_SPRETEiJ_G0029698) Suclg2 (MGP_SPRETEiJ_G0029699) Shrew mouse MODERN SPECIES 11 Cfap100 (MGP_PahariEiJ_G0022390) Klf15 (MGP_PahariEiJ_G0022391) Aldh1l1 (MGP_PahariEiJ_G0022392) Slc41a3 (MGP_PahariEiJ_G0022393) Iqsec1 (MGP_PahariEiJ_G0022394) #12 Nup210 (MGP_PahariEiJ_G0022395) #13 Hdac11 (MGP_PahariEiJ_G0022396) #14 Fbln2 (MGP_PahariEiJ_G0022397) #15 Wnt7a (MGP_PahariEiJ_G0022398) #16 Chchd4 (MGP_PahariEiJ_G0022399) #17 Tmem43 (MGP_PahariEiJ_G0022400) #18 Xpc (MGP_PahariEiJ_G0022401) #19 Lsm3 (MGP_PahariEiJ_G0022402) Slc6a6 (MGP_PahariEiJ_G0022403) #20 Grip2 (MGP_PahariEiJ_G0022404) #21 Ccdc174 (MGP_PahariEiJ_G0022405) #22 4930590J08Rik (MGP_PahariEiJ_G0022406) #23 Fgd5 (MGP_PahariEiJ_G0022407) #24 Nr2c2 (MGP_PahariEiJ_G0022408) #25 Mrps25 (MGP_PahariEiJ_G0022409) #26 Rbsn (MGP_PahariEiJ_G0022410) #27 Trh (MGP_PahariEiJ_G0022411) #28 Prickle2 (MGP_PahariEiJ_G0022412) Adamts9 (MGP_PahariEiJ_G0022413) MGP_PahariEiJ_G0022414 MGP_PahariEiJ_G0022415 MGP_PahariEiJ_G0022416 MGP_PahariEiJ_G0022417 Magi1 (MGP_PahariEiJ_G0022418) Slc25a26 (MGP_PahariEiJ_G0022419) Lrig1 (MGP_PahariEiJ_G0022420) Rat MODERN SPECIES 14 Cfap100 (ENSRNOG00000017959) Klf15 (ENSRNOG00000017808) Aldh1l1 (ENSRNOG00000047023) Slc41a3 (ENSRNOG00000045821) Iqsec1 (ENSRNOG00000060350) #12 Nup210 (ENSRNOG00000005390) #13 Hdac11 (ENSRNOG00000006824) #14 Fbln2 (ENSRNOG00000007338) #15 Wnt7a (ENSRNOG00000048782) #16 Chchd4-ps1 (ENSRNOG00000022466) #17 Tmem43 (ENSRNOG00000007519) #18 Xpc (ENSRNOG00000008274) #19 Lsm3 (ENSRNOG00000008733) Slc6a6 (ENSRNOG00000009019) #20 Grip2 (ENSRNOG00000009726) #21 Ccdc174 (ENSRNOG00000010090) #22 C4h3orf20 (ENSRNOG00000022155) #23 Fgd5 (ENSRNOG00000010213) #24 Nr2c2 (ENSRNOG00000010536) #25 Mrps25 (ENSRNOG00000010912) #26 Rbsn (ENSRNOG00000011391) #27 Trh (ENSRNOG00000011824) #28 Prickle2 (ENSRNOG00000012364) Adamts9 (ENSRNOG00000023257) Gm15737 (ENSRNOG00000064375) ENSRNOG00000064824 Magi1 (ENSRNOG00000022060) LOC100361920 (ENSRNOG00000052174) ENSRNOG00000071067 Slc25a26 (ENSRNOG00000012831) Lrig1 (ENSRNOG00000012952) Upper Galilee mountains blind mole rat MODERN SPECIES 1707 ENSNGAG00000010769 ENSNGAG00000008249 Chchd4 (ENSNGAG00000010995) #17 Tmem43 (ENSNGAG00000000844) #18 Xpc (ENSNGAG00000022710) #19 ENSNGAG00000022450 Slc6a6 (ENSNGAG00000022156) #20 Grip2 (ENSNGAG00000011926) #21 Ccdc174 (ENSNGAG00000011049) #22 Fgd5 (ENSNGAG00000024178) #24 Nr2c2 (ENSNGAG00000022501) #25 Mrps25 (ENSNGAG00000021861) #26 Rbsn (ENSNGAG00000022967) #27 Trh (ENSNGAG00000022332) #28 Tmcc1 (ENSNGAG00000010573) #29 Plxnd1 (ENSNGAG00000020476) #30 H1f8 (ENSNGAG00000023630) #31 Rho (ENSNGAG00000020656) #32 Ift122 (ENSNGAG00000022462) #33 ENSNGAG00000017381 #34 Efcab12 (ENSNGAG00000008314) #35 ENSNGAG00000024001 ##11 Cand2 (ENSNGAG00000024002) #10 Tmem40 (ENSNGAG00000021850) #9 Lesser Egyptian jerboa MODERN SPECIES 45 Commd10 (ENSJJAG00000019310) Arl14epl (ENSJJAG00000014960) Lvrn (ENSJJAG00000022104) ENSJJAG00000009764 ENSJJAG00000013169 Cdo1 (ENSJJAG00000010804) ENSJJAG00000011849 ENSJJAG00000014321 ENSJJAG00000012573 Fem1c (ENSJJAG00000017855) ENSJJAG00000013957 Ccdc112 (ENSJJAG00000018302) Pggt1b (ENSJJAG00000022637) Trim36 (ENSJJAG00000016437) Kcnn2 (ENSJJAG00000014162) Ccdc174 (ENSJJAG00000014232) #22 4930590J08Rik (ENSJJAG00000010892) #23 Fgd5 (ENSJJAG00000001082) #24 Nr2c2 (ENSJJAG00000016580) #25 Mrps25 (ENSJJAG00000013413) #26 Rbsn (ENSJJAG00000024360) #27 ENSJJAG00000023012 #28 Tmcc1 (ENSJJAG00000019999) #29 ENSJJAG00000020659 Plxnd1 (ENSJJAG00000014069) #30 ENSJJAG00000014828 #31 Rho (ENSJJAG00000022285) #32 Ift122 (ENSJJAG00000020288) #33 ENSJJAG00000016695 #34 ENSJJAG00000021233 ##11 Cand2 (ENSJJAG00000018247) #10 Kangaroo rat MODERN SPECIES 331 Klf15 (ENSDORG00000024290) ENSDORG00000014835 Slc41a3 (ENSDORG00000014834) Iqsec1 (ENSDORG00000014831) #12 Nup210 (ENSDORG00000013458) #13 Hdac11 (ENSDORG00000009690) #14 Fbln2 (ENSDORG00000009692) #15 Wnt7a (ENSDORG00000028810) #16 ENSDORG00000028796 ENSDORG00000025656 #17 Tmem43 (ENSDORG00000002103) #18 Xpc (ENSDORG00000002105) #19 ENSDORG00000006894 Slc6a6 (ENSDORG00000011320) #20 Grip2 (ENSDORG00000014464) #21 Ccdc174 (ENSDORG00000007328) #22 4930590J08Rik (ENSDORG00000007329) #23 Fgd5 (ENSDORG00000016297) #24 Nr2c2 (ENSDORG00000007038) #25 Mrps25 (ENSDORG00000026838) #26 Rbsn (ENSDORG00000009815) #27 Tmcc1 (ENSDORG00000026595) #29 Plxnd1 (ENSDORG00000000912) #30 ENSDORG00000026967 #31 Rho (ENSDORG00000000911) #32 Ift122 (ENSDORG00000000906) #33 ENSDORG00000000902 #34 Rpl32 (ENSDORG00000008426) #11 Cand2 (ENSDORG00000008424) #10 ENSDORG00000023579 #9 Raf1 (ENSDORG00000015622) #8 Rodentia_A ANCESTRAL SPECIES 27 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a ENSGT01030000234553.b.b.d.c.b.b ENSGT01030000234553.b.b.d.c.b.a.a.b.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Sciuridae ANCESTRAL SPECIES 41 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.f ENSGT01030000234553.b.b.d.c.b.a.a.a.e.b ENSGT01030000234553.b.b.d.c.b.a.a.b.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Marmotini ANCESTRAL SPECIES 49 ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.f ENSGT01030000234553.b.b.d.c.b.a.a.b.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Alpin marmot MODERN SPECIES 40 ENSMMMG00000011998 ENSMMMG00000011933 ZXDC (ENSMMMG00000011920) UROC1 (ENSMMMG00000011851) ENSMMMG00000011845 ENSMMMG00000011834 ENSMMMG00000011832 ENSMMMG00000011805 ENSMMMG00000011798 ENSMMMG00000011790 #17 TMEM43 (ENSMMMG00000011785) #18 XPC (ENSMMMG00000011669) #19 LSM3 (ENSMMMG00000011665) SLC6A6 (ENSMMMG00000011651) #20 GRIP2 (ENSMMMG00000011620) #21 CCDC174 (ENSMMMG00000011603) #22 C3orf20 (ENSMMMG00000011543) #23 FGD5 (ENSMMMG00000011473) #24 NR2C2 (ENSMMMG00000011464) #25 MRPS25 (ENSMMMG00000011452) #26 RBSN (ENSMMMG00000011435) #27 TRH (ENSMMMG00000011424) #28 TMCC1 (ENSMMMG00000011365) #29 ENSMMMG00000011319 #30 ENSMMMG00000011299 #31 RHO (ENSMMMG00000011272) #32 IFT122 (ENSMMMG00000011068) #33 MBD4 (ENSMMMG00000011043) #34 EFCAB12 (ENSMMMG00000011023) #35 ENSMMMG00000010997 ##11 ENSMMMG00000010993 #10 Marmotini_b ANCESTRAL SPECIES 62 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Arctic ground squirrel MODERN SPECIES 23 ENSUPAG00010000974 CHCHD4 (ENSUPAG00010000962) #17 TMEM43 (ENSUPAG00010000942) #18 XPC (ENSUPAG00010000908) #19 LSM3 (ENSUPAG00010000896) SLC6A6 (ENSUPAG00010000886) #20 GRIP2 (ENSUPAG00010000760) #21 CCDC174 (ENSUPAG00010000716) #22 C3orf20 (ENSUPAG00010000647) #23 FGD5 (ENSUPAG00010000616) #24 NR2C2 (ENSUPAG00010000576) #25 MRPS25 (ENSUPAG00010000567) #26 RBSN (ENSUPAG00010000555) #27 TRH (ENSUPAG00010000545) #28 TMCC1 (ENSUPAG00010000491) #29 PLXND1 (ENSUPAG00010000023) #30 H1-8 (ENSUPAG00010023069) #31 RHO (ENSUPAG00010023066) #32 IFT122 (ENSUPAG00010023058) #33 ENSUPAG00010023053 #34 ENSUPAG00010023052 #34 EFCAB12 (ENSUPAG00010023049) #35 ENSUPAG00010023046 ##11 Squirrel MODERN SPECIES 202 CHCHD4 (ENSSTOG00000006836) #17 TMEM43 (ENSSTOG00000029232) #18 XPC (ENSSTOG00000033914) #19 LSM3 (ENSSTOG00000006842) ENSSTOG00000023459 #20 GRIP2 (ENSSTOG00000000954) #21 CCDC174 (ENSSTOG00000027414) #22 C3orf20 (ENSSTOG00000002907) #23 FGD5 (ENSSTOG00000005202) #24 NR2C2 (ENSSTOG00000005250) #25 MRPS25 (ENSSTOG00000030962) #26 RBSN (ENSSTOG00000022986) #27 TRH (ENSSTOG00000026247) #28 TMCC1 (ENSSTOG00000019869) #29 PLXND1 (ENSSTOG00000024621) #30 RHO (ENSSTOG00000028352) #32 IFT122 (ENSSTOG00000004353) #33 MBD4 (ENSSTOG00000020663) #34 ENSSTOG00000026505 ##11 CAND2 (ENSSTOG00000023136) #10 RAF1 (ENSSTOG00000025146) #8 MKRN2 (ENSSTOG00000010520) #7 Eurasian red squirrel MODERN SPECIES 10 ENSSVLG00005019581 ENSSVLG00005019649 ENSSVLG00005019723 ENSSVLG00005019757 ENSSVLG00005019823 ENSSVLG00005019882 ENSSVLG00005019920 ENSSVLG00005019961 ENSSVLG00005020003 CHCHD4 (ENSSVLG00005020063) #17 TMEM43 (ENSSVLG00005020105) #18 XPC (ENSSVLG00005020171) #19 LSM3 (ENSSVLG00005020441) SLC6A6 (ENSSVLG00005020466) #20 GRIP2 (ENSSVLG00005020528) #21 CCDC174 (ENSSVLG00005020744) #22 C3orf20 (ENSSVLG00005020807) #23 FGD5 (ENSSVLG00005017167) #24 NR2C2 (ENSSVLG00005017625) #25 MRPS25 (ENSSVLG00005017966) #26 RBSN (ENSSVLG00005018031) #27 TRH (ENSSVLG00005018181) #28 ENSSVLG00005018231 TMCC1 (ENSSVLG00005018250) #29 PLXND1 (ENSSVLG00005018384) #30 ENSSVLG00005018771 #31 RHO (ENSSVLG00005018827) #32 IFT122 (ENSSVLG00005018941) #33 MBD4 (ENSSVLG00005019308) #34 EFCAB12 (ENSSVLG00005019404) #35 ENSSVLG00005019450 ##11 Hystricomorpha ANCESTRAL SPECIES 48 ENSGT00940000156836 ENSGT00390000011364 ENSGT00390000017131 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00390000016807 ENSGT01050000244850.A.b ENSGT00390000000903.b ENSGT00940000159178 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000155189 #29 ENSGT00940000160900 #31 ENSGT00390000016951 #28 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00940000156836 ENSGT00390000011364 ENSGT00390000017131 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00390000016807 ENSGT01050000244850.A.b ENSGT00390000000903.b ENSGT00940000159178 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 ENSGT00390000017530 #9 ENSGT00940000156084 #8 ENSGT00950000183077.a.b #7 Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00940000156836 ENSGT00390000011364 ENSGT00390000017131 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00390000016807 ENSGT01050000244850.A.b ENSGT00390000000903.b ENSGT00940000159178 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 ENSGT00390000017530 #9 ENSGT00940000156084 #8 ENSGT00950000183077.a.b #7 Long-tailed chinchilla MODERN SPECIES 136 KBTBD12 (ENSCLAG00000006214) MGLL (ENSCLAG00000010527) ABTB1 (ENSCLAG00000010398) PODXL2 (ENSCLAG00000011183) MCM2 (ENSCLAG00000013539) TPRA1 (ENSCLAG00000015612) PLXNA1 (ENSCLAG00000007472) CHCHD6 (ENSCLAG00000011198) TXNRD3 (ENSCLAG00000010439) CHCHD4 (ENSCLAG00000015153) #17 TMEM43 (ENSCLAG00000014810) #18 XPC (ENSCLAG00000013400) #19 LSM3 (ENSCLAG00000015997) SLC6A6 (ENSCLAG00000010187) #20 GRIP2 (ENSCLAG00000013538) #21 CCDC174 (ENSCLAG00000011014) #22 C3orf20 (ENSCLAG00000013841) #23 FGD5 (ENSCLAG00000011953) #24 NR2C2 (ENSCLAG00000011082) #25 MRPS25 (ENSCLAG00000008381) #26 RBSN (ENSCLAG00000011613) #27 TMCC1 (ENSCLAG00000014727) #29 PLXND1 (ENSCLAG00000012627) #30 RHO (ENSCLAG00000006233) #32 IFT122 (ENSCLAG00000006170) #33 MBD4 (ENSCLAG00000008974) #34 ENSCLAG00000007426 ##11 CAND2 (ENSCLAG00000007541) #10 TMEM40 (ENSCLAG00000009668) #9 RAF1 (ENSCLAG00000010316) #8 MKRN2 (ENSCLAG00000008755) #7 Guinea pig MODERN SPECIES 109 ENSCPOG00000036087 PLXNA1 (ENSCPOG00000014801) CHCHD6 (ENSCPOG00000035116) TXNRD3 (ENSCPOG00000007296) CHCHD4 (ENSCPOG00000034611) #17 TMEM43 (ENSCPOG00000024656) #18 XPC (ENSCPOG00000006655) #19 LSM3 (ENSCPOG00000034071) SLC6A6 (ENSCPOG00000014967) #20 GRIP2 (ENSCPOG00000021047) #21 CCDC174 (ENSCPOG00000039402) #22 C3orf20 (ENSCPOG00000006783) #23 FGD5 (ENSCPOG00000013157) #24 NR2C2 (ENSCPOG00000001512) #25 MRPS25 (ENSCPOG00000020398) #26 RBSN (ENSCPOG00000003200) #27 TMCC1 (ENSCPOG00000009299) #29 PLXND1 (ENSCPOG00000004989) #30 RHO (ENSCPOG00000004984) #32 IFT122 (ENSCPOG00000004975) #33 ENSCPOG00000004970 #34 RPL32 (ENSCPOG00000019967) ##11 CAND2 (ENSCPOG00000023286) #10 TMEM40 (ENSCPOG00000025632) #9 RAF1 (ENSCPOG00000001210) #8 MKRN2 (ENSCPOG00000001208) #7 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT01010000229800 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Suina ANCESTRAL SPECIES 1 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT01010000229800 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 Chacoan peccary MODERN SPECIES 950 ENSCWAG00000019826 #15 WNT7A (ENSCWAG00000019810) #16 ENSCWAG00000019798 ENSCWAG00000019729 CHCHD4 (ENSCWAG00000019712) #17 TMEM43 (ENSCWAG00000019695) #18 XPC (ENSCWAG00000019670) #19 LSM3 (ENSCWAG00000019659) SLC6A6 (ENSCWAG00000019647) #20 GRIP2 (ENSCWAG00000019448) #21 CCDC174 (ENSCWAG00000019402) #22 C3orf20 (ENSCWAG00000019265) #23 FGD5 (ENSCWAG00000019086) #24 NR2C2 (ENSCWAG00000018980) #25 MRPS25 (ENSCWAG00000018966) #26 RBSN (ENSCWAG00000018943) #27 TRH (ENSCWAG00000018918) #28 TMCC1 (ENSCWAG00000018870) #29 PLXND1 (ENSCWAG00000018660) #30 H1-8 (ENSCWAG00000018609) #31 RHO (ENSCWAG00000018568) #32 IFT122 (ENSCWAG00000018289) #33 ENSCWAG00000018255 ENSCWAG00000018236 #34 ENSCWAG00000018222 #34 EFCAB12 (ENSCWAG00000018153) #35 Pig MODERN SPECIES 4 ENSSSCG00000024000 CFAP92 (ENSSSCG00000024552) ACAD9 (ENSSSCG00000023354) IQSEC1 (ENSSSCG00000027812) #12 NUP210 (ENSSSCG00000011610) #13 HDAC11 (ENSSSCG00000028031) #14 FBLN2 (ENSSSCG00000011609) #15 WNT7A (ENSSSCG00000039010) #16 ENSSSCG00000048835 CHCHD4 (ENSSSCG00000011604) #17 TMEM43 (ENSSSCG00000011603) #18 XPC (ENSSSCG00000011602) #19 LSM3 (ENSSSCG00000011601) SLC6A6 (ENSSSCG00000011600) #20 GRIP2 (ENSSSCG00000011599) #21 CCDC174 (ENSSSCG00000040702) #22 FGD5 (ENSSSCG00000011598) #24 NR2C2 (ENSSSCG00000011594) #25 MRPS25 (ENSSSCG00000034318) #26 RBSN (ENSSSCG00000036643) #27 TRH (ENSSSCG00000055507) #28 ENSSSCG00000044894 ENSSSCG00000040441 TMCC1 (ENSSSCG00000011593) #29 PLXND1 (ENSSSCG00000011592) #30 H1-8 (ENSSSCG00000011591) #31 RHO (ENSSSCG00000011590) #32 IFT122 (ENSSSCG00000011589) #33 MBD4 (ENSSSCG00000033303) #34 EFCAB12 (ENSSSCG00000011587) #35 RPL32 (ENSSSCG00000035811) ##11 Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00940000175447 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT01010000229800 ENSGT00530000063687.a #34 Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT01010000229800 ENSGT00530000063687.a #34 Cetacea ANCESTRAL SPECIES 7 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132.u #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT01010000229800 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 Odontoceti ANCESTRAL SPECIES 5 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.u #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558.n #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.u.b #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558.n #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 ENSGT00390000017740.a.b #10 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.u.b #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558.n #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 ENSGT00390000017740.a.b #10 Monodontidae ANCESTRAL SPECIES 4 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.u.b #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558.n #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 ENSGT00390000017740.a.b #10 Narwhal MODERN SPECIES 310 EFCC1 (ENSMMNG00015013211) CFAP92 (ENSMMNG00015013200) ACAD9 (ENSMMNG00015013136) IQSEC1 (ENSMMNG00015013071) #12 NUP210 (ENSMMNG00015013010) #13 HDAC11 (ENSMMNG00015012961) #14 FBLN2 (ENSMMNG00015012901) #15 WNT7A (ENSMMNG00015012882) #16 CHCHD4 (ENSMMNG00015012871) #17 TMEM43 (ENSMMNG00015012854) #18 XPC (ENSMMNG00015012813) #19 LSM3 (ENSMMNG00015012798) SLC6A6 (ENSMMNG00015012780) #20 ENSMMNG00015012756 #21 ENSMMNG00015012733 #21 CCDC174 (ENSMMNG00015012708) #22 ENSMMNG00015012683 #23 FGD5 (ENSMMNG00015012622) #24 NR2C2 (ENSMMNG00015012595) #25 ENSMMNG00015012540 #26 RBSN (ENSMMNG00015012525) #27 TRH (ENSMMNG00015012517) #28 TMCC1 (ENSMMNG00015012483) #29 PLXND1 (ENSMMNG00015012370) #30 H1-8 (ENSMMNG00015012313) #31 RHO (ENSMMNG00015012293) #32 IFT122 (ENSMMNG00015012203) #33 MBD4 (ENSMMNG00015012156) #34 EFCAB12 (ENSMMNG00015012144) #35 RPL32 (ENSMMNG00015012118) #11 CAND2 (ENSMMNG00015012039) #10 Beluga whale MODERN SPECIES 66 GP9 (ENSDLEG00000010224) ENSDLEG00000010210 CFAP92 (ENSDLEG00000010066) ACAD9 (ENSDLEG00000009919) IQSEC1 (ENSDLEG00000009845) #12 ENSDLEG00000009821 #13 HDAC11 (ENSDLEG00000009783) #14 FBLN2 (ENSDLEG00000009714) #15 WNT7A (ENSDLEG00000009696) #16 ENSDLEG00000009673 #17 TMEM43 (ENSDLEG00000009650) #18 XPC (ENSDLEG00000009595) #19 ENSDLEG00000009566 SLC6A6 (ENSDLEG00000009533) #20 GRIP2 (ENSDLEG00000009241) #21 CCDC174 (ENSDLEG00000009174) #22 FGD5 (ENSDLEG00000009061) #24 NR2C2 (ENSDLEG00000008987) #25 ENSDLEG00000008967 #26 ENSDLEG00000008956 #26 RBSN (ENSDLEG00000008914) #27 TRH (ENSDLEG00000008893) #28 TMCC1 (ENSDLEG00000008842) #29 PLXND1 (ENSDLEG00000008614) #30 H1-8 (ENSDLEG00000008521) #31 RHO (ENSDLEG00000008470) #32 IFT122 (ENSDLEG00000008304) #33 MBD4 (ENSDLEG00000008239) #34 ENSDLEG00000008201 #35 RPL32 (ENSDLEG00000008175) #11 CAND2 (ENSDLEG00000008059) #10 Vaquita MODERN SPECIES 2 GP9 (ENSPSNG00000022691) EFCC1 (ENSPSNG00000022692) CFAP92 (ENSPSNG00000022693) ACAD9 (ENSPSNG00000022694) IQSEC1 (ENSPSNG00000022695) #12 NUP210 (ENSPSNG00000022696) #13 HDAC11 (ENSPSNG00000022697) #14 FBLN2 (ENSPSNG00000022698) #15 WNT7A (ENSPSNG00000022699) #16 ENSPSNG00000022700 #17 TMEM43 (ENSPSNG00000022701) #18 XPC (ENSPSNG00000022702) #19 ENSPSNG00000022703 SLC6A6 (ENSPSNG00000022704) #20 GRIP2 (ENSPSNG00000022705) #21 CCDC174 (ENSPSNG00000022707) #22 FGD5 (ENSPSNG00000022708) #24 NR2C2 (ENSPSNG00000022710) #25 ENSPSNG00000022711 #26 RBSN (ENSPSNG00000022712) #27 TRH (ENSPSNG00000022713) #28 ENSPSNG00000022714 #29 ENSPSNG00000022717 #29 PLXND1 (ENSPSNG00000022718) #30 H1-8 (ENSPSNG00000022719) #31 RHO (ENSPSNG00000022720) #32 IFT122 (ENSPSNG00000022721) #33 MBD4 (ENSPSNG00000022722) #34 EFCAB12 (ENSPSNG00000022723) #35 RPL32 (ENSPSNG00000022724) ##11 CAND2 (ENSPSNG00000009832) #10 Dolphin MODERN SPECIES 1175 CCDC174 (ENSTTRG00000009852) #22 ENSTTRG00000009866 #23 FGD5 (ENSTTRG00000009869) #24 NR2C2 (ENSTTRG00000009876) #25 MRPS25 (ENSTTRG00000009881) #26 RBSN (ENSTTRG00000009883) #27 TRH (ENSTTRG00000009888) #28 Sperm whale MODERN SPECIES 9 RAB7A (ENSPCTG00005021510) CNBP (ENSPCTG00005021559) RAB43 (ENSPCTG00005021593) GP9 (ENSPCTG00005021605) EFCC1 (ENSPCTG00005021614) CFAP92 (ENSPCTG00005021671) ACAD9 (ENSPCTG00005021782) IQSEC1 (ENSPCTG00005021839) #12 FBLN2 (ENSPCTG00005021931) #15 WNT7A (ENSPCTG00005021969) #16 XPC (ENSPCTG00005021979) #19 TMEM43 (ENSPCTG00005021993) #18 CHCHD4 (ENSPCTG00005021998) #17 SLC6A6 (ENSPCTG00005022008) #20 ENSPCTG00005004303 #21 CCDC174 (ENSPCTG00005004364) #22 C3orf20 (ENSPCTG00005004416) #23 FGD5 (ENSPCTG00005004623) #24 ENSPCTG00005005367 NR2C2 (ENSPCTG00005005417) #25 MRPS25 (ENSPCTG00005005475) #26 RBSN (ENSPCTG00005005519) #27 TMCC1 (ENSPCTG00005005558) #29 ENSPCTG00005005601 TRH (ENSPCTG00005005621) #28 ENSPCTG00005005684 #30 ENSPCTG00005005647 H1-8 (ENSPCTG00005005747) #31 RHO (ENSPCTG00005005781) #32 IFT122 (ENSPCTG00005005825) #33 MBD4 (ENSPCTG00005005918) #34 Blue whale MODERN SPECIES 2 EFCC1 (ENSBMSG00010012255) CFAP92 (ENSBMSG00010012178) ACAD9 (ENSBMSG00010012123) IQSEC1 (ENSBMSG00010012039) #12 NUP210 (ENSBMSG00010011953) #13 HDAC11 (ENSBMSG00010011895) #14 FBLN2 (ENSBMSG00010011854) #15 WNT7A (ENSBMSG00010011831) #16 ENSBMSG00010011817 ENSBMSG00010011806 #17 TMEM43 (ENSBMSG00010011796) #18 XPC (ENSBMSG00010011503) #19 LSM3 (ENSBMSG00010011411) SLC6A6 (ENSBMSG00010011361) #20 GRIP2 (ENSBMSG00010011207) #21 CCDC174 (ENSBMSG00010011163) #22 C3orf20 (ENSBMSG00010011129) #23 FGD5 (ENSBMSG00010011044) #24 NR2C2 (ENSBMSG00010010995) #25 MRPS25 (ENSBMSG00010010976) #26 RBSN (ENSBMSG00010010963) #27 TRH (ENSBMSG00010010946) #28 TMCC1 (ENSBMSG00010010919) #29 PLXND1 (ENSBMSG00010010833) #30 ENSBMSG00010010803 RHO (ENSBMSG00010010727) #32 IFT122 (ENSBMSG00010010593) #33 ENSBMSG00010010542 ENSBMSG00010010533 #34 EFCAB12 (ENSBMSG00010010503) #35 RPL32 (ENSBMSG00010010483) #11 Pecora ANCESTRAL SPECIES 17 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.d ##11 ENSGT00390000017740.a.b #10 Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 16 CFAP92 (ENSCHYG00000020007) ACAD9 (ENSCHYG00000020301) IQSEC1 (ENSCHYG00000020598) #12 NUP210 (ENSCHYG00000021572) #13 HDAC11 (ENSCHYG00000022340) #14 FBLN2 (ENSCHYG00000022807) #15 WNT7A (ENSCHYG00000023307) #16 ENSCHYG00000023332 ENSCHYG00000023376 ENSCHYG00000023706 #17 TMEM43 (ENSCHYG00000023737) #18 XPC (ENSCHYG00000023838) #19 LSM3 (ENSCHYG00000023916) SLC6A6 (ENSCHYG00000023942) #20 GRIP2 (ENSCHYG00000024067) #21 ENSCHYG00000024372 #22 C3orf20 (ENSCHYG00000024531) #23 FGD5 (ENSCHYG00000024639) #24 NR2C2 (ENSCHYG00000024864) #25 ENSCHYG00000025047 #26 RBSN (ENSCHYG00000025089) #27 ENSCHYG00000025128 TIMP4 (ENSCHYG00000025170) PPARG (ENSCHYG00000025198) TSEN2 (ENSCHYG00000025333) MKRN2OS (ENSCHYG00000025406) MKRN2 (ENSCHYG00000025428) #7 RAF1 (ENSCHYG00000025496) #8 ENSCHYG00000013805 TMEM40 (ENSCHYG00000013848) #9 CAND2 (ENSCHYG00000014141) #10 Yarkand deer MODERN SPECIES 27 SNX20 (ENSCHYG00000004988) NKD1 (ENSCHYG00000004944) BRD7 (ENSCHYG00000004908) ADCY7 (ENSCHYG00000004827) TENT4B (ENSCHYG00000004780) HEATR3 (ENSCHYG00000004729) CNEP1R1 (ENSCHYG00000004697) ZNF423 (ENSCHYG00000004665) C16orf78 (ENSCHYG00000004643) CBLN1 (ENSCHYG00000004635) N4BP1 (ENSCHYG00000004618) ENSCHYG00000004605 LONP2 (ENSCHYG00000004582) ABCC11 (ENSCHYG00000004542) ABCC12 (ENSCHYG00000004510) ENSCHYG00000004492 #22 ENSCHYG00000002555 ITFG1 (ENSCHYG00000001906) ENSCHYG00000001892 NETO2 (ENSCHYG00000001873) DNAJA2 (ENSCHYG00000001848) GPT2 (ENSCHYG00000001813) ENSCHYG00000001787 MYLK3 (ENSCHYG00000001728) ORC6 (ENSCHYG00000001691) VPS35 (ENSCHYG00000001622) SHCBP1 (ENSCHYG00000001586) ENSCHYG00000001567 ENSCHYG00000001554 DBNDD1 (ENSCHYG00000001531) ENSCHYG00000001480 Yarkand deer MODERN SPECIES 2 ENSCHYG00000009840 FOXN2 (ENSCHYG00000009915) PPP1R21 (ENSCHYG00000010072) ENSCHYG00000010413 GTF2A1L (ENSCHYG00000010466) LHCGR (ENSCHYG00000010738) FSHR (ENSCHYG00000010939) ENSCHYG00000011174 NRXN1 (ENSCHYG00000011322) ENSCHYG00000014456 ASB3 (ENSCHYG00000014492) CHAC2 (ENSCHYG00000014670) ERLEC1 (ENSCHYG00000014797) PSME4 (ENSCHYG00000015425) ENSCHYG00000016000 ENSCHYG00000016207 #22 ENSCHYG00000016240 C2orf73 (ENSCHYG00000016294) ENSCHYG00000016372 SPTBN1 (ENSCHYG00000016452) EML6 (ENSCHYG00000017556) RTN4 (ENSCHYG00000018275) ENSCHYG00000018581 ENSCHYG00000018614 ENSCHYG00000018711 MTIF2 (ENSCHYG00000018835) ENSCHYG00000019045 CCDC88A (ENSCHYG00000019389) CFAP36 (ENSCHYG00000024204) PPP4R3B (ENSCHYG00000024346) PNPT1 (ENSCHYG00000024494) Percora_a ANCESTRAL SPECIES 19 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.d ##11 ENSGT00390000017740.a.b #10 Bovidae ANCESTRAL SPECIES 19 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 ENSGT00390000013266 ENSGT00390000003839 ENSGT00950000183077.a.b #7 ENSGT00940000156084 #8 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 Bovinae ANCESTRAL SPECIES 16 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 ENSGT00390000013266 ENSGT00390000003839 ENSGT00950000183077.a.b #7 ENSGT00940000156084 #8 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 Bos ANCESTRAL SPECIES 16 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 ENSGT00390000013266 ENSGT00390000003839 ENSGT00950000183077.a.b #7 ENSGT00940000156084 #8 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 Bos_b ANCESTRAL SPECIES 17 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 ENSGT00390000013266 ENSGT00390000003839 ENSGT00950000183077.a.b #7 ENSGT00940000156084 #8 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 Cow MODERN SPECIES 14 CFAP92 (ENSBTAG00000003244) ACAD9 (ENSBTAG00000003242) IQSEC1 (ENSBTAG00000003237) #12 NUP210 (ENSBTAG00000003665) #13 HDAC11 (ENSBTAG00000007208) #14 FBLN2 (ENSBTAG00000004014) #15 WNT7A (ENSBTAG00000001668) #16 ENSBTAG00000017173 ENSBTAG00000023918 CHCHD4 (ENSBTAG00000015529) #17 TMEM43 (ENSBTAG00000007360) #18 XPC (ENSBTAG00000007362) #19 LSM3 (ENSBTAG00000007363) SLC6A6 (ENSBTAG00000011088) #20 GRIP2 (ENSBTAG00000011896) #21 CCDC174 (ENSBTAG00000038298) #22 C22H3orf20 (ENSBTAG00000040133) #23 FGD5 (ENSBTAG00000006789) #24 NR2C2 (ENSBTAG00000013716) #25 MRPS25 (ENSBTAG00000013723) #26 RBSN (ENSBTAG00000013725) #27 ENSBTAG00000031115 TIMP4 (ENSBTAG00000020263) SYN2 (ENSBTAG00000020260) PPARG (ENSBTAG00000001333) TSEN2 (ENSBTAG00000037980) MKRN2OS (ENSBTAG00000024991) MKRN2 (ENSBTAG00000004512) #7 RAF1 (ENSBTAG00000045748) #8 TMEM40 (ENSBTAG00000000161) #9 CAND2 (ENSBTAG00000015273) #10 Hybrid Bos Indicus MODERN SPECIES 14 IQSEC1 (ENSBIXG00005004938) #12 NUP210 (ENSBIXG00005028460) #13 ENSBIXG00005028341 #14 FBLN2 (ENSBIXG00005028202) #15 WNT7A (ENSBIXG00005004835) #16 XPC (ENSBIXG00005004824) #19 ENSBIXG00005028013 ENSBIXG00005027959 CHCHD4 (ENSBIXG00005027940) #17 TMEM43 (ENSBIXG00005027897) #18 LSM3 (ENSBIXG00005027836) SLC6A6 (ENSBIXG00005027782) #20 GRIP2 (ENSBIXG00005027668) #21 ENSBIXG00005027488 ENSBIXG00005027475 CCDC174 (ENSBIXG00005027454) #22 C3orf20 (ENSBIXG00005027421) #23 FGD5 (ENSBIXG00005027347) #24 NR2C2 (ENSBIXG00005026766) #25 MRPS25 (ENSBIXG00005026733) #26 RBSN (ENSBIXG00005026693) #27 SYN2 (ENSBIXG00005026582) TIMP4 (ENSBIXG00005026516) ENSBIXG00005026465 MKRN2OS (ENSBIXG00005026155) MKRN2 (ENSBIXG00005026143) #7 RAF1 (ENSBIXG00005004450) #8 TMEM40 (ENSBIXG00005026020) #9 CAND2 (ENSBIXG00005025955) #10 RPL32 (ENSBIXG00005025898) ##11 MBD4 (ENSBIXG00005025831) #34 Bos_a ANCESTRAL SPECIES 9 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 ENSGT00390000003839 ENSGT00950000183077.a.b #7 ENSGT00940000156084 #8 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 ENSGT00940000153973.d ##11 ENSGT00390000014874 #35 Domestic yak MODERN SPECIES 14 ENSBGRG00000014318 ACAD9 (ENSBGRG00000014463) IQSEC1 (ENSBGRG00000015000) #12 NUP210 (ENSBGRG00000016433) #13 ENSBGRG00000016882 #14 FBLN2 (ENSBGRG00000017885) #15 WNT7A (ENSBGRG00000018308) #16 ENSBGRG00000018348 ENSBGRG00000018493 CHCHD4 (ENSBGRG00000018588) #17 TMEM43 (ENSBGRG00000018668) #18 XPC (ENSBGRG00000018846) #19 ENSBGRG00000019432 SLC6A6 (ENSBGRG00000019545) #20 GRIP2 (ENSBGRG00000020144) #21 CCDC174 (ENSBGRG00000021048) #22 C3orf20 (ENSBGRG00000021321) #23 FGD5 (ENSBGRG00000021386) #24 NR2C2 (ENSBGRG00000021614) #25 MRPS25 (ENSBGRG00000021676) #26 RBSN (ENSBGRG00000021762) #27 SYN2 (ENSBGRG00000021920) TIMP4 (ENSBGRG00000022226) ENSBGRG00000022315 MKRN2OS (ENSBGRG00000022696) MKRN2 (ENSBGRG00000022735) #7 RAF1 (ENSBGRG00000022891) #8 TMEM40 (ENSBGRG00000023210) #9 CAND2 (ENSBGRG00000023333) #10 RPL32 (ENSBGRG00000023548) ##11 EFCAB12 (ENSBGRG00000023675) #35 Wild yak MODERN SPECIES 1036 NUP210 (ENSBMUG00000016331) #13 HDAC11 (ENSBMUG00000016382) #14 FBLN2 (ENSBMUG00000016869) #15 WNT7A (ENSBMUG00000017015) #16 ENSBMUG00000017074 CHCHD4 (ENSBMUG00000017090) #17 TMEM43 (ENSBMUG00000017104) #18 XPC (ENSBMUG00000017174) #19 LSM3 (ENSBMUG00000017198) SLC6A6 (ENSBMUG00000017219) #20 GRIP2 (ENSBMUG00000017311) #21 CCDC174 (ENSBMUG00000017336) #22 C3orf20 (ENSBMUG00000017362) #23 FGD5 (ENSBMUG00000017500) #24 NR2C2 (ENSBMUG00000017570) #25 MRPS25 (ENSBMUG00000017623) #26 RBSN (ENSBMUG00000017669) #27 American bison MODERN SPECIES 3340 ENSBBBG00000010529 ACAD9 (ENSBBBG00000001842) IQSEC1 (ENSBBBG00000010622) #12 NUP210 (ENSBBBG00000001892) #13 HDAC11 (ENSBBBG00000001904) #14 FBLN2 (ENSBBBG00000006978) #15 WNT7A (ENSBBBG00000010868) #16 ENSBBBG00000010906 ENSBBBG00000001941 CHCHD4 (ENSBBBG00000010930) #17 TMEM43 (ENSBBBG00000010956) #18 XPC (ENSBBBG00000001954) #19 LSM3 (ENSBBBG00000007967) SLC6A6 (ENSBBBG00000010987) #20 GRIP2 (ENSBBBG00000011088) #21 CCDC174 (ENSBBBG00000002003) #22 C3orf20 (ENSBBBG00000011153) #23 NR2C2 (ENSBBBG00000011226) #25 MRPS25 (ENSBBBG00000011234) #26 RBSN (ENSBBBG00000011250) #27 TIMP4 (ENSBBBG00000011264) SYN2 (ENSBBBG00000011280) PPARG (ENSBBBG00000011336) TSEN2 (ENSBBBG00000002087) MKRN2OS (ENSBBBG00000006934) MKRN2 (ENSBBBG00000011440) #7 RAF1 (ENSBBBG00000011493) #8 TMEM40 (ENSBBBG00000011569) #9 CAND2 (ENSBBBG00000002144) #10 RPL32 (ENSBBBG00000002148) ##11 EFCAB12 (ENSBBBG00000011681) #35 Caprinae ANCESTRAL SPECIES 15 ENSGT00390000007219 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 ENSGT00390000013266 ENSGT00390000003839 ENSGT00950000183077.a.b #7 ENSGT00940000156084 #8 ENSGT00390000017530 #9 ENSGT00390000017740.a.b #10 Goat MODERN SPECIES 14 ENSCHIG00000011214 ENSCHIG00000011159 ACAD9 (ENSCHIG00000020865) IQSEC1 (ENSCHIG00000025033) #12 NUP210 (ENSCHIG00000018468) #13 HDAC11 (ENSCHIG00000010417) #14 ENSCHIG00000017980 #15 WNT7A (ENSCHIG00000022383) #16 ENSCHIG00000007622 CHCHD4 (ENSCHIG00000018477) #17 TMEM43 (ENSCHIG00000020802) #18 XPC (ENSCHIG00000017709) #19 LSM3 (ENSCHIG00000024650) SLC6A6 (ENSCHIG00000024785) #20 GRIP2 (ENSCHIG00000016620) #21 CCDC174 (ENSCHIG00000008286) #22 C3orf20 (ENSCHIG00000009719) #23 FGD5 (ENSCHIG00000023792) #24 NR2C2 (ENSCHIG00000008676) #25 MRPS25 (ENSCHIG00000009931) #26 RBSN (ENSCHIG00000019361) #27 ENSCHIG00000027078 TIMP4 (ENSCHIG00000017995) SYN2 (ENSCHIG00000024912) PPARG (ENSCHIG00000015877) TSEN2 (ENSCHIG00000013772) MKRN2OS (ENSCHIG00000013445) MKRN2 (ENSCHIG00000021098) #7 RAF1 (ENSCHIG00000006954) #8 CAND2 (ENSCHIG00000017799) #10 RPL32 (ENSCHIG00000011099) ##11 Rambouillet Sheep MODERN SPECIES 10 ISY1 (ENSOARG00020016029) RAB43 (ENSOARG00020015993) GP9 (ENSOARG00020015968) EFCC1 (ENSOARG00020015940) IQSEC1 (ENSOARG00020015244) #12 NUP210 (ENSOARG00020013605) #13 HDAC11 (ENSOARG00020011736) #14 WNT7A (ENSOARG00020025976) #16 ENSOARG00020025971 ENSOARG00020025966 CHCHD4 (ENSOARG00020025962) #17 TMEM43 (ENSOARG00020025957) #18 ENSOARG00020025950 SLC6A6 (ENSOARG00020025943) #20 GRIP2 (ENSOARG00020025919) #21 CCDC174 (ENSOARG00020025904) #22 C3orf20 (ENSOARG00020025893) #23 NR2C2 (ENSOARG00020025878) #25 MRPS25 (ENSOARG00020025871) #26 RBSN (ENSOARG00020025862) #27 ENSOARG00020025856 SYN2 (ENSOARG00020025846) PPARG (ENSOARG00020025834) TSEN2 (ENSOARG00020025828) MKRN2OS (ENSOARG00020025824) MKRN2 (ENSOARG00020025818) #7 RAF1 (ENSOARG00020025810) #8 TMEM40 (ENSOARG00020025803) #9 CAND2 (ENSOARG00020025794) #10 RPL32 (ENSOARG00020025785) ##11 EFCAB12 (ENSOARG00020025775) #35 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1221 ACAD9 (ENSMMSG00000023625) IQSEC1 (ENSMMSG00000023645) #12 ENSMMSG00000023671 NUP210 (ENSMMSG00000023684) #13 HDAC11 (ENSMMSG00000023715) #14 FBLN2 (ENSMMSG00000023788) #15 WNT7A (ENSMMSG00000023850) #16 ENSMMSG00000023855 ENSMMSG00000023860 CHCHD4 (ENSMMSG00000023866) #17 TMEM43 (ENSMMSG00000023872) #18 XPC (ENSMMSG00000023884) #19 LSM3 (ENSMMSG00000023892) SLC6A6 (ENSMMSG00000023907) #20 GRIP2 (ENSMMSG00000023940) #21 ENSMMSG00000023958 #22 C3orf20 (ENSMMSG00000023974) #23 FGD5 (ENSMMSG00000023995) #24 NR2C2 (ENSMMSG00000024042) #25 MRPS25 (ENSMMSG00000024052) #26 RBSN (ENSMMSG00000024056) #27 TRH (ENSMMSG00000024061) #28 ENSMMSG00000024063 TMCC1 (ENSMMSG00000024064) #29 PLXND1 (ENSMMSG00000024073) #30 ENSMMSG00000024082 #31 RHO (ENSMMSG00000024086) #32 IFT122 (ENSMMSG00000024092) #33 MBD4 (ENSMMSG00000024114) #34 EFCAB12 (ENSMMSG00000024116) #35 RPL32 (ENSMMSG00000024124) ##11 Siberian musk deer MODERN SPECIES 57 MANEA (ENSMMSG00000013181) ENSMMSG00000013154 #22 FUT9 (ENSMMSG00000013147) UFL1 (ENSMMSG00000013113) FHL5 (ENSMMSG00000013095) GPR63 (ENSMMSG00000013085) NDUFAF4 (ENSMMSG00000013073) ENSMMSG00000013052 KLHL32 (ENSMMSG00000012591) MMS22L (ENSMMSG00000012530) ENSMMSG00000012510 POU3F2 (ENSMMSG00000012495) FBXL4 (ENSMMSG00000012478) FAXC (ENSMMSG00000012455) COQ3 (ENSMMSG00000012403) PNISR (ENSMMSG00000012362) ENSMMSG00000012312 Camelidae ANCESTRAL SPECIES 7 ENSGT00390000014109 ENSGT00940000161980 ENSGT00390000007219 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.b ##11 Alpaca MODERN SPECIES 1234 CCDC174 (ENSVPAG00000001179) #22 Arabian camel MODERN SPECIES 8 RAB43 (ENSCDRG00005009894) ENSCDRG00005009274 ACAD9 (ENSCDRG00005009090) IQSEC1 (ENSCDRG00005007783) #12 NUP210 (ENSCDRG00005005049) #13 HDAC11 (ENSCDRG00005004608) #14 FBLN2 (ENSCDRG00005004504) #15 WNT7A (ENSCDRG00005004471) #16 CHCHD4 (ENSCDRG00005004452) #17 TMEM43 (ENSCDRG00005004382) #18 XPC (ENSCDRG00005004331) #19 LSM3 (ENSCDRG00005004298) SLC6A6 (ENSCDRG00005004206) #20 GRIP2 (ENSCDRG00005004071) #21 ENSCDRG00005004055 CCDC174 (ENSCDRG00005003993) #22 C3orf20 (ENSCDRG00005003918) #23 FGD5 (ENSCDRG00005003759) #24 NR2C2 (ENSCDRG00005003539) #25 MRPS25 (ENSCDRG00005003419) #26 RBSN (ENSCDRG00005003390) #27 TRH (ENSCDRG00005003364) #28 TMCC1 (ENSCDRG00005018594) #29 PLXND1 (ENSCDRG00005018551) #30 ENSCDRG00005018533 #30 ENSCDRG00005018504 ENSCDRG00005018477 RHO (ENSCDRG00005018442) #32 IFT122 (ENSCDRG00005018267) #33 MBD4 (ENSCDRG00005018206) #34 EFCAB12 (ENSCDRG00005018119) #35 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132.z #17 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 Carnivora ANCESTRAL SPECIES 6 ENSGT00390000007219 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00940000153973.c.a.b.a.b ##11 Caniformia ANCESTRAL SPECIES 4 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Mustelinae ANCESTRAL SPECIES 18 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951.gb ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 American mink DUPLICATION American mink MODERN SPECIES 287 CHCHD4 (ENSNVIG00000010189) #17 TMEM43 (ENSNVIG00000010171) #18 XPC (ENSNVIG00000010151) #19 LSM3 (ENSNVIG00000010143) SLC6A6 (ENSNVIG00000010115) #20 GRIP2 (ENSNVIG00000010025) #21 ENSNVIG00000010012 #22 ENSNVIG00000009972 #22 C3orf20 (ENSNVIG00000009902) #23 FGD5 (ENSNVIG00000009850) #24 NR2C2 (ENSNVIG00000009821) #25 MRPS25 (ENSNVIG00000009805) #26 RBSN (ENSNVIG00000009795) #27 TRH (ENSNVIG00000009787) #28 TMCC1 (ENSNVIG00000009775) #29 PLXND1 (ENSNVIG00000009720) #30 H1-8 (ENSNVIG00000009706) #31 RHO (ENSNVIG00000009693) #32 IFT122 (ENSNVIG00000009217) #33 MBD4 (ENSNVIG00000009126) #34 EFCAB12 (ENSNVIG00000009088) #35 ENSNVIG00000009040 ##11 CAND2 (ENSNVIG00000008985) #10 American mink MODERN SPECIES 287 CHCHD4 (ENSNVIG00000010189) #17 TMEM43 (ENSNVIG00000010171) #18 XPC (ENSNVIG00000010151) #19 LSM3 (ENSNVIG00000010143) SLC6A6 (ENSNVIG00000010115) #20 GRIP2 (ENSNVIG00000010025) #21 ENSNVIG00000010012 #22 ENSNVIG00000009972 #22 C3orf20 (ENSNVIG00000009902) #23 FGD5 (ENSNVIG00000009850) #24 NR2C2 (ENSNVIG00000009821) #25 MRPS25 (ENSNVIG00000009805) #26 RBSN (ENSNVIG00000009795) #27 TRH (ENSNVIG00000009787) #28 TMCC1 (ENSNVIG00000009775) #29 PLXND1 (ENSNVIG00000009720) #30 H1-8 (ENSNVIG00000009706) #31 RHO (ENSNVIG00000009693) #32 IFT122 (ENSNVIG00000009217) #33 MBD4 (ENSNVIG00000009126) #34 EFCAB12 (ENSNVIG00000009088) #35 ENSNVIG00000009040 ##11 Ferret MODERN SPECIES 163 CFAP92 (ENSMPUG00000017299) ACAD9 (ENSMPUG00000017287) IQSEC1 (ENSMPUG00000017284) #12 NUP210 (ENSMPUG00000017280) #13 ENSMPUG00000017279 HDAC11 (ENSMPUG00000017271) #14 FBLN2 (ENSMPUG00000017267) #15 ENSMPUG00000017265 WNT7A (ENSMPUG00000017264) #16 CHCHD4 (ENSMPUG00000017261) #17 TMEM43 (ENSMPUG00000017259) #18 ENSMPUG00000017257 ENSMPUG00000017256 SLC6A6 (ENSMPUG00000017255) #20 GRIP2 (ENSMPUG00000017253) #21 CCDC174 (ENSMPUG00000017252) #22 C3orf20 (ENSMPUG00000017251) #23 FGD5 (ENSMPUG00000017250) #24 NR2C2 (ENSMPUG00000017249) #25 MRPS25 (ENSMPUG00000017248) #26 RBSN (ENSMPUG00000017247) #27 TRH (ENSMPUG00000017246) #28 TMCC1 (ENSMPUG00000017243) #29 ENSMPUG00000017241 PLXND1 (ENSMPUG00000017238) #30 ENSMPUG00000017237 RHO (ENSMPUG00000017225) #32 IFT122 (ENSMPUG00000017197) #33 MBD4 (ENSMPUG00000017195) #34 EFCAB12 (ENSMPUG00000017190) #35 ENSMPUG00000017189 ##11 Ursidae ANCESTRAL SPECIES 11 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b.d #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 Ursus ANCESTRAL SPECIES 43 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b.d #32 ENSGT00390000001016.b #33 ENSGT00390000012138.a.a.j.s.b ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.c.a #11 Polar bear MODERN SPECIES 210 ENSUMAG00000015120 ENSUMAG00000015128 CFAP92 (ENSUMAG00000015150) ACAD9 (ENSUMAG00000015181) IQSEC1 (ENSUMAG00000015296) #12 NUP210 (ENSUMAG00000015439) #13 HDAC11 (ENSUMAG00000015867) #14 FBLN2 (ENSUMAG00000015872) #15 WNT7A (ENSUMAG00000015882) #16 CHCHD4 (ENSUMAG00000015891) #17 TMEM43 (ENSUMAG00000015893) #18 XPC (ENSUMAG00000015898) #19 LSM3 (ENSUMAG00000015905) SLC6A6 (ENSUMAG00000016085) #20 GRIP2 (ENSUMAG00000016889) #21 CCDC174 (ENSUMAG00000017022) #22 C3orf20 (ENSUMAG00000017032) #23 FGD5 (ENSUMAG00000017065) #24 NR2C2 (ENSUMAG00000017295) #25 MRPS25 (ENSUMAG00000017301) #26 RBSN (ENSUMAG00000017308) #27 TRH (ENSUMAG00000017316) #28 TMCC1 (ENSUMAG00000017322) #29 PLXND1 (ENSUMAG00000017372) #30 RHO (ENSUMAG00000017511) #32 IFT122 (ENSUMAG00000017522) #33 MBD4 (ENSUMAG00000017542) #34 ENSUMAG00000017544 EFCAB12 (ENSUMAG00000017549) #35 RPL32 (ENSUMAG00000017557) ##11 CAND2 (ENSUMAG00000017566) #10 American black bear MODERN SPECIES 5803 CCDC174 (ENSUAMG00000013124) #22 Giant Panda MODERN SPECIES 14 GP9 (ENSAMEG00000015373) ENSAMEG00000025541 ENSAMEG00000015377 ENSAMEG00000015386 ENSAMEG00000015435 #12 NUP210 (ENSAMEG00000009583) #13 HDAC11 (ENSAMEG00000009565) #14 FBLN2 (ENSAMEG00000009506) #15 WNT7A (ENSAMEG00000030362) #16 CHCHD4 (ENSAMEG00000009457) #17 TMEM43 (ENSAMEG00000009426) #18 XPC (ENSAMEG00000009407) #19 LSM3 (ENSAMEG00000009405) SLC6A6 (ENSAMEG00000009329) #20 GRIP2 (ENSAMEG00000009300) #21 CCDC174 (ENSAMEG00000009271) #22 C3orf20 (ENSAMEG00000009263) #23 FGD5 (ENSAMEG00000009227) #24 NR2C2 (ENSAMEG00000004318) #25 MRPS25 (ENSAMEG00000027927) #26 ENSAMEG00000004361 #27 TRH (ENSAMEG00000025033) #28 TMCC1 (ENSAMEG00000004384) #29 PLXND1 (ENSAMEG00000004387) #30 H1-8 (ENSAMEG00000004448) #31 RHO (ENSAMEG00000004453) #32 IFT122 (ENSAMEG00000004471) #33 ENSAMEG00000030948 MBD4 (ENSAMEG00000004562) #34 ENSAMEG00000004574 #35 RPL32 (ENSAMEG00000004583) #11 Canidae ANCESTRAL SPECIES ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000162932.o ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT00390000010054.a.e ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951.eb ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.a.b ##11 ENSGT00390000017740.a.b #10 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000162932.o ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT00390000010054.a.e ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951.eb ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00950000183087.A.a.a.b.p.a.a ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.a.b ##11 Dog MODERN SPECIES 12 ENSCAFG00845021518 ENSCAFG00845021688 #12 ENSCAFG00845022488 #13 ENSCAFG00845022870 #14 FBLN2 (ENSCAFG00845023226) #15 BEX4 (ENSCAFG00845023625) WNT7A (ENSCAFG00845023657) #16 ENSCAFG00845023700 ENSCAFG00845023722 XPC (ENSCAFG00845023793) #19 CHCHD4 (ENSCAFG00845023967) #17 TMEM43 (ENSCAFG00845024053) #18 LSM3 (ENSCAFG00845024243) SLC6A6 (ENSCAFG00845024299) #20 GRIP2 (ENSCAFG00845024472) #21 CCDC174 (ENSCAFG00845025324) #22 C3orf20 (ENSCAFG00845025479) #23 FGD5 (ENSCAFG00845025740) #24 NR2C2 (ENSCAFG00845026116) #25 MRPS25 (ENSCAFG00845026361) #26 ENSCAFG00845026464 #27 TRH (ENSCAFG00845026628) #28 ENSCAFG00845026667 TMCC1 (ENSCAFG00845026698) #29 RPL26 (ENSCAFG00845026761) PLXND1 (ENSCAFG00845026992) #30 H1-8 (ENSCAFG00845027541) #31 RHO (ENSCAFG00845027581) #32 IFT122 (ENSCAFG00845027707) #33 MBD4 (ENSCAFG00845028304) #34 ENSCAFG00845028379 #35 Dingo MODERN SPECIES 236 ACAD9 (ENSCAFG00020004917) IQSEC1 (ENSCAFG00020004925) #12 NUP210 (ENSCAFG00020004962) #13 HDAC11 (ENSCAFG00020005611) #14 FBLN2 (ENSCAFG00020005625) #15 ENSCAFG00020005637 WNT7A (ENSCAFG00020005641) #16 ENSCAFG00020005651 ENSCAFG00020005677 CHCHD4 (ENSCAFG00020005681) #17 TMEM43 (ENSCAFG00020005686) #18 XPC (ENSCAFG00020005688) #19 ENSCAFG00020005692 SLC6A6 (ENSCAFG00020005700) #20 GRIP2 (ENSCAFG00020005863) #21 CCDC174 (ENSCAFG00020006016) #22 C3orf20 (ENSCAFG00020006113) #23 FGD5 (ENSCAFG00020006160) #24 NR2C2 (ENSCAFG00020006182) #25 MRPS25 (ENSCAFG00020006345) #26 RBSN (ENSCAFG00020006347) #27 TRH (ENSCAFG00020006350) #28 ENSCAFG00020006352 ENSCAFG00020006358 ENSCAFG00020006362 #29 ENSCAFG00020006372 #29 PLXND1 (ENSCAFG00020006389) #30 H1-8 (ENSCAFG00020006486) #31 RHO (ENSCAFG00020006492) #32 IFT122 (ENSCAFG00020006537) #33 MBD4 (ENSCAFG00020007082) #34 Red fox MODERN SPECIES 130 SLC6A6 (ENSVVUG00000013760) #20 GRIP2 (ENSVVUG00000013780) #21 CCDC174 (ENSVVUG00000013811) #22 C3orf20 (ENSVVUG00000013813) #23 FGD5 (ENSVVUG00000013818) #24 NR2C2 (ENSVVUG00000013819) #25 ENSVVUG00000013842 MRPS25 (ENSVVUG00000013846) #26 RBSN (ENSVVUG00000013853) #27 TRH (ENSVVUG00000013865) #28 TMCC1 (ENSVVUG00000013886) #29 PLXND1 (ENSVVUG00000013916) #30 H1-8 (ENSVVUG00000014145) #31 RHO (ENSVVUG00000014149) #32 IFT122 (ENSVVUG00000014184) #33 MBD4 (ENSVVUG00000014222) #34 EFCAB12 (ENSVVUG00000014226) #35 RPL32 (ENSVVUG00000014231) ##11 Felidae ANCESTRAL SPECIES 17 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00500000045038.m.b ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 Panthera ANCESTRAL SPECIES 1 ENSGT00390000007219 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00500000045038.m.b ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 Tiger MODERN SPECIES 421 ENSPTIG00000021360 #13 HDAC11 (ENSPTIG00000020186) #14 FBLN2 (ENSPTIG00000018231) #15 WNT7A (ENSPTIG00000017156) #16 ENSPTIG00000016568 CHCHD4 (ENSPTIG00000016341) #17 TMEM43 (ENSPTIG00000014059) #18 XPC (ENSPTIG00000013279) #19 LSM3 (ENSPTIG00000013072) SLC6A6 (ENSPTIG00000012115) #20 GRIP2 (ENSPTIG00000011516) #21 CCDC174 (ENSPTIG00000010750) #22 C3orf20 (ENSPTIG00000008193) #23 FGD5 (ENSPTIG00000000044) #24 NR2C2 (ENSPTIG00000017630) #25 MRPS25 (ENSPTIG00000016698) #26 RBSN (ENSPTIG00000016511) #27 TRH (ENSPTIG00000016436) #28 ENSPTIG00000016325 #29 Panthera_a ANCESTRAL SPECIES ENSGT00390000007219 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132.y.a.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00500000045038.m.b ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 lion MODERN SPECIES 2 GP9 (ENSPLOG00000003607) EFCC1 (ENSPLOG00000003589) CFAP92 (ENSPLOG00000003557) ACAD9 (ENSPLOG00000003509) ENSPLOG00000003482 #13 HDAC11 (ENSPLOG00000003423) #14 FBLN2 (ENSPLOG00000003304) #15 WNT7A (ENSPLOG00000003262) #16 ENSPLOG00000003237 #17 TMEM43 (ENSPLOG00000003216) #18 XPC (ENSPLOG00000003191) #19 LSM3 (ENSPLOG00000003173) ENSPLOG00000003139 SLC6A6 (ENSPLOG00000003114) #20 GRIP2 (ENSPLOG00000003035) #21 CCDC174 (ENSPLOG00000002974) #22 C3orf20 (ENSPLOG00000002933) #23 FGD5 (ENSPLOG00000002817) #24 NR2C2 (ENSPLOG00000002757) #25 MRPS25 (ENSPLOG00000002725) #26 RBSN (ENSPLOG00000002563) #27 TRH (ENSPLOG00000002548) #28 TMCC1 (ENSPLOG00000002518) #29 PLXND1 (ENSPLOG00000002460) #30 H1-8 (ENSPLOG00000002423) #31 RHO (ENSPLOG00000002405) #32 IFT122 (ENSPLOG00000002159) #33 MBD4 (ENSPLOG00000002021) #34 EFCAB12 (ENSPLOG00000001903) #35 RPL32 (ENSPLOG00000001870) #11 CAND2 (ENSPLOG00000001847) #10 leopard MODERN SPECIES 154 ENSPPRG00000010029 #13 HDAC11 (ENSPPRG00000010530) #14 FBLN2 (ENSPPRG00000012713) #15 WNT7A (ENSPPRG00000012734) #16 ENSPPRG00000012751 ENSPPRG00000012762 #17 TMEM43 (ENSPPRG00000012773) #18 XPC (ENSPPRG00000012784) #19 ENSPPRG00000012912 ENSPPRG00000012913 SLC6A6 (ENSPPRG00000013003) #20 GRIP2 (ENSPPRG00000013151) #21 CCDC174 (ENSPPRG00000013291) #22 C3orf20 (ENSPPRG00000013356) #23 FGD5 (ENSPPRG00000013574) #24 NR2C2 (ENSPPRG00000013873) #25 MRPS25 (ENSPPRG00000013901) #26 RBSN (ENSPPRG00000013941) #27 TRH (ENSPPRG00000013952) #28 TMCC1 (ENSPPRG00000014113) #29 PLXND1 (ENSPPRG00000014283) #30 H1-8 (ENSPPRG00000014444) #31 RHO (ENSPPRG00000014471) #32 ENSPPRG00000014504 IFT122 (ENSPPRG00000015865) #33 MBD4 (ENSPPRG00000016480) #34 EFCAB12 (ENSPPRG00000016816) #35 RPL32 (ENSPPRG00000016964) ##11 Cat MODERN SPECIES 1 ENSFCAG00000046514 CFAP92 (ENSFCAG00000044668) ACAD9 (ENSFCAG00000008660) IQSEC1 (ENSFCAG00000013910) #12 NUP210 (ENSFCAG00000007505) #13 HDAC11 (ENSFCAG00000007506) #14 FBLN2 (ENSFCAG00000007507) #15 WNT7A (ENSFCAG00000044055) #16 ENSFCAG00000041881 #17 TMEM43 (ENSFCAG00000001863) #18 XPC (ENSFCAG00000001865) #19 ENSFCAG00000038453 ENSFCAG00000036915 SLC6A6 (ENSFCAG00000007651) #20 GRIP2 (ENSFCAG00000007655) #21 CCDC174 (ENSFCAG00000027124) #22 CA2H3orf20 (ENSFCAG00000007658) #23 FGD5 (ENSFCAG00000026112) #24 NR2C2 (ENSFCAG00000003537) #25 MRPS25 (ENSFCAG00000027687) #26 RBSN (ENSFCAG00000025901) #27 TRH (ENSFCAG00000029423) #28 TMCC1 (ENSFCAG00000027586) #29 PLXND1 (ENSFCAG00000000095) #30 H1-8 (ENSFCAG00000000094) #31 RHO (ENSFCAG00000000092) #32 IFT122 (ENSFCAG00000000086) #33 MBD4 (ENSFCAG00000000083) #34 EFCAB12 (ENSFCAG00000000081) #35 RPL32 (ENSFCAG00000030450) #11 CAND2 (ENSFCAG00000008340) #10 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132.z #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00940000153973.d ##11 Equus ANCESTRAL SPECIES 5 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b.f ENSGT01030000234553.b.b.d.c.b.e ENSGT00390000013132.z #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583.l #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00940000153973.d ##11 ENSGT00390000017740.a.b #10 ENSGT00390000017530 #9 Donkey MODERN SPECIES 13 ENSEASG00005023789 ENSEASG00005015789 #12 NUP210 (ENSEASG00005015493) #13 HDAC11 (ENSEASG00005015454) #14 FBLN2 (ENSEASG00005015453) #15 WNT7A (ENSEASG00005026827) #16 ENSEASG00005015785 ENSEASG00005024080 ENSEASG00005015447 CHCHD4 (ENSEASG00005015446) #17 TMEM43 (ENSEASG00005015445) #18 XPC (ENSEASG00005015444) #19 LSM3 (ENSEASG00005034598) SLC6A6 (ENSEASG00005015439) #20 GRIP2 (ENSEASG00005015437) #21 CCDC174 (ENSEASG00005015436) #22 C3orf20 (ENSEASG00005015430) #23 FGD5 (ENSEASG00005015426) #24 ENSEASG00005015425 NR2C2 (ENSEASG00005015422) #25 ENSEASG00005015419 #26 ENSEASG00005015384 #27 ENSEASG00005015376 #28 TMCC1 (ENSEASG00005015373) #29 PLXND1 (ENSEASG00005015351) #30 H1-8 (ENSEASG00005025925) #31 RHO (ENSEASG00005015347) #32 IFT122 (ENSEASG00005014840) #33 MBD4 (ENSEASG00005014800) #34 ENSEASG00005014792 ##11 CAND2 (ENSEASG00005014788) #10 Horse MODERN SPECIES 7 IQSEC1 (ENSECAG00000023717) #12 ENSECAG00000037764 NUP210 (ENSECAG00000009171) #13 HDAC11 (ENSECAG00000002905) #14 FBLN2 (ENSECAG00000008859) #15 WNT7A (ENSECAG00000009213) #16 ENSECAG00000058098 ENSECAG00000048396 ENSECAG00000014121 CHCHD4 (ENSECAG00000002378) #17 TMEM43 (ENSECAG00000005661) #18 XPC (ENSECAG00000015499) #19 LSM3 (ENSECAG00000007803) SLC6A6 (ENSECAG00000012750) #20 GRIP2 (ENSECAG00000013613) #21 CCDC174 (ENSECAG00000000540) #22 ENSECAG00000049631 C16H3orf20 (ENSECAG00000013357) #23 FGD5 (ENSECAG00000016458) #24 NR2C2 (ENSECAG00000003791) #25 MRPS25 (ENSECAG00000020841) #26 RBSN (ENSECAG00000021486) #27 TRH (ENSECAG00000006178) #28 TMCC1 (ENSECAG00000006725) #29 PLXND1 (ENSECAG00000009159) #30 H1-8 (ENSECAG00000013614) #31 RHO (ENSECAG00000013709) #32 IFT122 (ENSECAG00000015360) #33 MBD4 (ENSECAG00000022106) #34 CAND2 (ENSECAG00000010515) #10 RPL32 (ENSECAG00000049946) ##11 Chiroptera ANCESTRAL SPECIES 54 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT00390000013132.y.a #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b.d #11 ENSGT00390000017740.a.b #10 Microbat MODERN SPECIES 945 SLC25A36 (ENSMLUG00000001464) SPSB4 (ENSMLUG00000001564) PXYLP1 (ENSMLUG00000012502) ZBTB38 (ENSMLUG00000012512) RASA2 (ENSMLUG00000007834) TFDP2 (ENSMLUG00000014707) ENSMLUG00000007878 GRK7 (ENSMLUG00000030484) ATP1B3 (ENSMLUG00000011339) ENSMLUG00000010633 #17 TMEM43 (ENSMLUG00000010638) #18 XPC (ENSMLUG00000010655) #19 LSM3 (ENSMLUG00000010677) SLC6A6 (ENSMLUG00000003862) #20 GRIP2 (ENSMLUG00000003868) #21 CCDC174 (ENSMLUG00000010390) #22 C3orf20 (ENSMLUG00000010404) #23 FGD5 (ENSMLUG00000010008) #24 NR2C2 (ENSMLUG00000010062) #25 ENSMLUG00000017504 #26 RBSN (ENSMLUG00000010088) #27 TRH (ENSMLUG00000007249) #28 TMCC1 (ENSMLUG00000016755) #29 PLXND1 (ENSMLUG00000014790) #30 ENSMLUG00000025226 #31 RHO (ENSMLUG00000014786) #32 IFT122 (ENSMLUG00000014771) #33 MBD4 (ENSMLUG00000014766) #34 ENSMLUG00000014759 #35 RPL32 (ENSMLUG00000022528) #11 CAND2 (ENSMLUG00000006333) #10 Greater horseshoe bat MODERN SPECIES 8 SPSB4 (ENSRFEG00010014088) PXYLP1 (ENSRFEG00010014126) ZBTB38 (ENSRFEG00010014220) RASA2 (ENSRFEG00010014242) ENSRFEG00010014323 RNF7 (ENSRFEG00010014386) ATP1B3 (ENSRFEG00010014478) ENSRFEG00010014549 CHCHD4 (ENSRFEG00010015265) #17 TMEM43 (ENSRFEG00010015322) #18 XPC (ENSRFEG00010015501) #19 LSM3 (ENSRFEG00010015559) SLC6A6 (ENSRFEG00010015647) #20 GRIP2 (ENSRFEG00010015722) #21 ENSRFEG00010016101 CCDC174 (ENSRFEG00010016163) #22 C3orf20 (ENSRFEG00010016242) #23 FGD5 (ENSRFEG00010016481) #24 NR2C2 (ENSRFEG00010017049) #25 ENSRFEG00010017258 MRPS25 (ENSRFEG00010017280) #26 RBSN (ENSRFEG00010017337) #27 TRH (ENSRFEG00010017403) #28 ENSRFEG00010017442 TMCC1 (ENSRFEG00010017473) #29 PLXND1 (ENSRFEG00010017592) #30 RHO (ENSRFEG00010017659) #32 IFT122 (ENSRFEG00010017745) #33 MBD4 (ENSRFEG00010018007) #34 EFCAB12 (ENSRFEG00010018070) #35 RPL32 (ENSRFEG00010018162) #11 Megabat MODERN SPECIES 4174 CCDC174 (ENSPVAG00000011840) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00440000033958 #22 Common shrew MODERN SPECIES 3818 ENSSARG00000004489 #22 Hedgehog MODERN SPECIES 4949 ENSEEUG00000004005 #22 Atlantogenata ANCESTRAL SPECIES 34 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT01030000234553.b.b.d.c.b ENSGT01030000234553.b.b.d.d ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.b.b #11 ENSGT00940000153973.c.a.a ##11 Xenarthra ANCESTRAL SPECIES 628 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 Sloth MODERN SPECIES 4402 CCDC174 (ENSCHOG00000005203) #22 C3orf20 (ENSCHOG00000005218) #23 Armadillo MODERN SPECIES 4754 SLC6A6 (ENSDNOG00000047566) #20 GRIP2 (ENSDNOG00000046149) #21 ENSDNOG00000048955 CCDC174 (ENSDNOG00000044545) #22 FGD5 (ENSDNOG00000037043) #24 NR2C2 (ENSDNOG00000006388) #25 ENSDNOG00000048066 #26 Afrotheria ANCESTRAL SPECIES 32 ENSGT00950000183014.f.b.a.b ENSGT00390000007219 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00950000183014.f.b.a.b ENSGT00390000007219 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 #12 ENSGT00390000009491.d #13 ENSGT00940000156308 #14 ENSGT00940000156047 #15 ENSGT00940000158523 #16 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000153973.c.a.a ##11 ENSGT00390000017740.a.b #10 Elephant MODERN SPECIES 49 ENSLAFG00000028660 ENSLAFG00000014529 ENSLAFG00000008454 ACAD9 (ENSLAFG00000008449) IQSEC1 (ENSLAFG00000017531) #12 NUP210 (ENSLAFG00000000497) #13 HDAC11 (ENSLAFG00000000504) #14 FBLN2 (ENSLAFG00000013555) #15 WNT7A (ENSLAFG00000001335) #16 CHCHD4 (ENSLAFG00000018489) #17 TMEM43 (ENSLAFG00000006731) #18 XPC (ENSLAFG00000022512) #19 LSM3 (ENSLAFG00000023308) SLC6A6 (ENSLAFG00000015145) #20 GRIP2 (ENSLAFG00000032264) #21 CCDC174 (ENSLAFG00000012663) #22 C3orf20 (ENSLAFG00000015670) #23 FGD5 (ENSLAFG00000010491) #24 NR2C2 (ENSLAFG00000010224) #25 MRPS25 (ENSLAFG00000022178) #26 RBSN (ENSLAFG00000004227) #27 TRH (ENSLAFG00000015165) #28 TMCC1 (ENSLAFG00000013730) #29 PLXND1 (ENSLAFG00000003012) #30 RHO (ENSLAFG00000001359) #32 IFT122 (ENSLAFG00000010612) #33 MBD4 (ENSLAFG00000010609) #34 EFCAB12 (ENSLAFG00000010605) #35 ENSLAFG00000032737 ##11 CAND2 (ENSLAFG00000017706) #10 TMEM40 (ENSLAFG00000010230) #9 Hyrax MODERN SPECIES 8261 CCDC174 (ENSPCAG00000009016) #22 Tenrec MODERN SPECIES 4774 ENSETEG00000016781 #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00510000050664 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a.b #34 ENSGT00530000063687.a.a #34 ENSGT00390000014874 #35 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00510000050664 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a.b #34 ENSGT00530000063687.a.a #34 ENSGT00390000014874 #35 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000157922 #24 ENSGT00510000050664 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a.b #34 ENSGT00530000063687.a.a #34 ENSGT00390000014874 #35 ENSGT00940000153973 #11 ENSGT00390000017740.a.b #10 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000157922 #24 ENSGT00510000050664 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a.b #34 ENSGT00530000063687.a.a #34 ENSGT00390000014874 #35 ENSGT00940000153973 #11 ENSGT00390000017740.a.b #10 Common wonbat MODERN SPECIES 1012 TXNRD3 (ENSVURG00010016171) CHST13 (ENSVURG00010016165) SLC41A3 (ENSVURG00010016155) ALDH1L1 (ENSVURG00010016140) KLF15 (ENSVURG00010016133) ENSVURG00010016102 ENSVURG00010015824 UROC1 (ENSVURG00010015797) ENSVURG00010015780 CHCHD4 (ENSVURG00010015776) #17 TMEM43 (ENSVURG00010015761) #18 XPC (ENSVURG00010015746) #19 ENSVURG00010015743 SLC6A6 (ENSVURG00010015726) #20 GRIP2 (ENSVURG00010014963) #21 CCDC174 (ENSVURG00010014898) #22 FGD5 (ENSVURG00010014863) #24 ENSVURG00010014858 NR2C2 (ENSVURG00010014575) #25 MRPS25 (ENSVURG00010014548) #26 RBSN (ENSVURG00010014533) #27 TMCC1 (ENSVURG00010014518) #29 PLXND1 (ENSVURG00010014456) #30 RHO (ENSVURG00010014434) #32 IFT122 (ENSVURG00010014263) #33 ENSVURG00010014225 #34 ENSVURG00010014212 #35 ENSVURG00010014192 #11 CAND2 (ENSVURG00010013279) #10 TMEM40 (ENSVURG00010013215) #9 RAF1 (ENSVURG00010013196) #8 koala MODERN SPECIES 10 TXNRD3 (ENSPCIG00000007513) CHST13 (ENSPCIG00000031809) SLC41A3 (ENSPCIG00000030893) ALDH1L1 (ENSPCIG00000007535) KLF15 (ENSPCIG00000007539) CFAP100 (ENSPCIG00000007541) ENSPCIG00000007546 UROC1 (ENSPCIG00000007560) ENSPCIG00000007553 ENSPCIG00000007567 #17 TMEM43 (ENSPCIG00000007570) #18 XPC (ENSPCIG00000007579) #19 LSM3 (ENSPCIG00000036405) SLC6A6 (ENSPCIG00000025392) #20 GRIP2 (ENSPCIG00000024617) #21 ENSPCIG00000014781 #22 FGD5 (ENSPCIG00000023533) #24 NR2C2 (ENSPCIG00000023531) #25 ENSPCIG00000023530 #26 RBSN (ENSPCIG00000023528) #27 ENSPCIG00000023527 #28 TMCC1 (ENSPCIG00000002496) #29 PLXND1 (ENSPCIG00000002459) #30 RHO (ENSPCIG00000002359) #32 IFT122 (ENSPCIG00000002304) #33 ENSPCIG00000035263 #34 ENSPCIG00000002276 #34 ENSPCIG00000002263 #35 RPL32 (ENSPCIG00000036095) #11 CAND2 (ENSPCIG00000002229) #10 TMEM40 (ENSPCIG00000002215) #9 Wallaby MODERN SPECIES 6037 CCDC174 (ENSMEUG00000008447) #22 Tasmanian devil MODERN SPECIES ENSSHAG00000011983 ENSSHAG00000011415 ENSSHAG00000010624 ALDH1L1 (ENSSHAG00000009971) KLF15 (ENSSHAG00000007635) ENSSHAG00000006525 ENSSHAG00000006236 ENSSHAG00000004989 ENSSHAG00000003679 ENSSHAG00000021201 #17 TMEM43 (ENSSHAG00000029957) #18 XPC (ENSSHAG00000001194) #19 LSM3 (ENSSHAG00000031935) SLC6A6 (ENSSHAG00000017858) #20 GRIP2 (ENSSHAG00000017717) #21 CCDC174 (ENSSHAG00000017233) #22 ENSSHAG00000017083 #23 FGD5 (ENSSHAG00000016383) #24 ENSSHAG00000024996 NR2C2 (ENSSHAG00000016078) #25 ENSSHAG00000015988 #27 ENSSHAG00000026312 #28 TMCC1 (ENSSHAG00000014733) #29 PLXND1 (ENSSHAG00000013651) #30 ENSSHAG00000029482 #31 RHO (ENSSHAG00000013534) #32 IFT122 (ENSSHAG00000013078) #33 MBD4 (ENSSHAG00000012953) #34 ENSSHAG00000012822 #35 ENSSHAG00000012782 #11 CAND2 (ENSSHAG00000012567) #10 Opossum MODERN SPECIES 5 SLC41A3 (ENSMODG00000007626) ALDH1L1 (ENSMODG00000007603) ENSMODG00000051161 ENSMODG00000007452 ENSMODG00000007443 UROC1 (ENSMODG00000007413) ENSMODG00000007369 ENSMODG00000007319 #17 TMEM43 (ENSMODG00000007313) #18 XPC (ENSMODG00000007289) #19 LSM3 (ENSMODG00000007275) ENSMODG00000028241 SLC6A6 (ENSMODG00000007269) #20 ENSMODG00000007232 #21 ENSMODG00000038869 #21 CCDC174 (ENSMODG00000007181) #22 ENSMODG00000046894 #23 FGD5 (ENSMODG00000007131) #24 ENSMODG00000028915 NR2C2 (ENSMODG00000007047) #25 MRPS25 (ENSMODG00000007018) #26 RBSN (ENSMODG00000007011) #27 ENSMODG00000028708 #28 ENSMODG00000042057 ENSMODG00000044035 TMCC1 (ENSMODG00000006987) #29 PLXND1 (ENSMODG00000006963) #30 ENSMODG00000028422 #31 RHO (ENSMODG00000006488) #32 IFT122 (ENSMODG00000006462) #33 ENSMODG00000042737 #34 Platypus MODERN SPECIES 84 TWF2 (ENSOANG00000009135) PPM1M (ENSOANG00000004965) ALDH1L1 (ENSOANG00000022069) ENSOANG00000043021 KLF15 (ENSOANG00000014825) ENSOANG00000040843 ENSOANG00000029239 ENSOANG00000051327 UROC1 (ENSOANG00000031100) TMEM43 (ENSOANG00000002492) #18 ENSOANG00000012272 #19 ENSOANG00000012273 SLC6A6 (ENSOANG00000002131) #20 GRIP2 (ENSOANG00000048579) #21 ENSOANG00000030991 CCDC174 (ENSOANG00000043074) #22 ENSOANG00000031502 #23 FGD5 (ENSOANG00000010885) #24 NR2C2 (ENSOANG00000010886) #25 MRPS25 (ENSOANG00000021369) #26 RBSN (ENSOANG00000014024) #27 ENSOANG00000046113 #28 TMCC1 (ENSOANG00000014027) #29 STK32A (ENSOANG00000013674) ENSOANG00000050239 ENSOANG00000039855 ENSOANG00000041269 ENSOANG00000048041 ENSOANG00000040036 FAM13B (ENSOANG00000046554) PKD2L2 (ENSOANG00000009283) Sauria ANCESTRAL SPECIES 13 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 Lepidosauria ANCESTRAL SPECIES 14 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Episquamata ANCESTRAL SPECIES 4 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Laterata ANCESTRAL SPECIES 1 ENSGT00940000154420.C.h.a ENSGT00940000159178.u ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951.d ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Common wall lizard MODERN SPECIES 10 SLC41A3 (ENSPMRG00000011167) KLF15 (ENSPMRG00000011173) CFAP100 (ENSPMRG00000011175) ENSPMRG00000011188 ENSPMRG00000011199 ENSPMRG00000011217 ENSPMRG00000011264 ENSPMRG00000011298 ENSPMRG00000011299 CHCHD4 (ENSPMRG00000011303) #17 TMEM43 (ENSPMRG00000011312) #18 XPC (ENSPMRG00000011328) #19 LSM3 (ENSPMRG00000004857) SLC6A6 (ENSPMRG00000004867) #20 GRIP2 (ENSPMRG00000004886) #21 CCDC174 (ENSPMRG00000004947) #22 C3orf20 (ENSPMRG00000004963) #23 FGD5 (ENSPMRG00000004976) #24 NR2C2 (ENSPMRG00000004983) #25 MRPS25 (ENSPMRG00000004986) #26 RBSN (ENSPMRG00000004989) #27 TMCC1 (ENSPMRG00000004998) #29 PLXND1 (ENSPMRG00000005004) #30 RHO (ENSPMRG00000005016) #32 IFT122 (ENSPMRG00000005031) #33 MBD4 (ENSPMRG00000005046) #34 ENSPMRG00000005051 #35 ENSPMRG00000005060 CAND2 (ENSPMRG00000005087) #10 SEC13 (ENSPMRG00000005203) GHRL (ENSPMRG00000005213) Argentine black and white tegu MODERN SPECIES 8 CHST13 (ENSSMRG00000000915) SLC41A3 (ENSSMRG00000000928) ENSSMRG00000001018 ENSSMRG00000001036 KLF15 (ENSSMRG00000001106) CFAP100 (ENSSMRG00000001120) ENSSMRG00000001157 UROC1 (ENSSMRG00000001185) ENSSMRG00000002514 CHCHD4 (ENSSMRG00000002521) #17 TMEM43 (ENSSMRG00000002526) #18 XPC (ENSSMRG00000002538) #19 ENSSMRG00000002551 SLC6A6 (ENSSMRG00000002572) #20 GRIP2 (ENSSMRG00000002602) #21 CCDC174 (ENSSMRG00000002656) #22 C3orf20 (ENSSMRG00000002762) #23 FGD5 (ENSSMRG00000002830) #24 NR2C2 (ENSSMRG00000002839) #25 MRPS25 (ENSSMRG00000002859) #26 RBSN (ENSSMRG00000002888) #27 TRH (ENSSMRG00000002898) #28 TMCC1 (ENSSMRG00000002914) #29 PLXND1 (ENSSMRG00000002931) #30 RHO (ENSSMRG00000003021) #32 IFT122 (ENSSMRG00000003022) #33 MBD4 (ENSSMRG00000003044) #34 ENSSMRG00000003057 #35 ENSSMRG00000003058 CAND2 (ENSSMRG00000003068) #10 SEC13 (ENSSMRG00000003096) Toxicofera ANCESTRAL SPECIES 3 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Elapidae ANCESTRAL SPECIES 2 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Elapidae_a ANCESTRAL SPECIES 8 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Acanthophiinae ANCESTRAL SPECIES 10 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 ENSGT00940000153393.B Mainland tiger snake MODERN SPECIES 2 TXNRD3 (ENSNSUG00000001166) CHST13 (ENSNSUG00000001711) SLC41A3 (ENSNSUG00000001713) KLF15 (ENSNSUG00000001719) ENSNSUG00000001721 ENSNSUG00000001724 ENSNSUG00000001726 UROC1 (ENSNSUG00000001729) ENSNSUG00000001741 CHCHD4 (ENSNSUG00000001989) #17 TMEM43 (ENSNSUG00000001998) #18 XPC (ENSNSUG00000002003) #19 LSM3 (ENSNSUG00000002076) SLC6A6 (ENSNSUG00000002092) #20 GRIP2 (ENSNSUG00000006160) #21 CCDC174 (ENSNSUG00000006176) #22 C3orf20 (ENSNSUG00000006177) #23 FGD5 (ENSNSUG00000006181) #24 NR2C2 (ENSNSUG00000006199) #25 MRPS25 (ENSNSUG00000006200) #26 RBSN (ENSNSUG00000006202) #27 TRH (ENSNSUG00000006272) #28 TMCC1 (ENSNSUG00000006273) #29 ENSNSUG00000006274 ENSNSUG00000006275 RHO (ENSNSUG00000006276) #32 IFT122 (ENSNSUG00000006277) #33 ENSNSUG00000006278 #34 ENSNSUG00000006279 CAND2 (ENSNSUG00000006281) #10 SEC13 (ENSNSUG00000006282) Eastern brown snake MODERN SPECIES 3 PLXNA1 (ENSPTXG00000003183) TXNRD3 (ENSPTXG00000003158) CHST13 (ENSPTXG00000003156) SLC41A3 (ENSPTXG00000003152) KLF15 (ENSPTXG00000003151) CFAP100 (ENSPTXG00000003082) ENSPTXG00000003081 UROC1 (ENSPTXG00000003078) ENSPTXG00000003070 CHCHD4 (ENSPTXG00000003068) #17 TMEM43 (ENSPTXG00000003067) #18 XPC (ENSPTXG00000003066) #19 LSM3 (ENSPTXG00000003064) SLC6A6 (ENSPTXG00000003063) #20 GRIP2 (ENSPTXG00000003056) #21 CCDC174 (ENSPTXG00000003052) #22 C3orf20 (ENSPTXG00000003048) #23 FGD5 (ENSPTXG00000003045) #24 NR2C2 (ENSPTXG00000003035) #25 MRPS25 (ENSPTXG00000003034) #26 RBSN (ENSPTXG00000003032) #27 TMCC1 (ENSPTXG00000003030) #29 PLXND1 (ENSPTXG00000002956) #30 RHO (ENSPTXG00000002941) #32 ENSPTXG00000002940 #33 ENSPTXG00000002938 #33 MBD4 (ENSPTXG00000002936) #34 ENSPTXG00000002935 #35 ENSPTXG00000002933 CAND2 (ENSPTXG00000002928) #10 SEC13 (ENSPTXG00000002924) Blue-lipped sea krait MODERN SPECIES 2579 CCDC174 (ENSLLTG00000002162) #22 Indian cobra MODERN SPECIES 1 CHST13 (ENSNNAG00000019037) ENSNNAG00000019036 ENSNNAG00000019033 ENSNNAG00000019026 KLF15 (ENSNNAG00000019020) ENSNNAG00000019018 ENSNNAG00000019015 UROC1 (ENSNNAG00000018994) ENSNNAG00000018977 CHCHD4 (ENSNNAG00000018974) #17 TMEM43 (ENSNNAG00000018972) #18 XPC (ENSNNAG00000018970) #19 LSM3 (ENSNNAG00000018966) SLC6A6 (ENSNNAG00000018965) #20 GRIP2 (ENSNNAG00000018949) #21 CCDC174 (ENSNNAG00000018938) #22 C3orf20 (ENSNNAG00000018933) #23 FGD5 (ENSNNAG00000018923) #24 NR2C2 (ENSNNAG00000018912) #25 MRPS25 (ENSNNAG00000018905) #26 RBSN (ENSNNAG00000018903) #27 TRH (ENSNNAG00000018901) #28 TMCC1 (ENSNNAG00000018897) #29 ENSNNAG00000018896 ENSNNAG00000018895 RHO (ENSNNAG00000018891) #32 IFT122 (ENSNNAG00000018719) #33 ENSNNAG00000018649 #35 ENSNNAG00000018642 CAND2 (ENSNNAG00000018590) #10 SEC13 (ENSNNAG00000018559) Lizard MODERN SPECIES 1 SLC41A3 (ENSACAG00000043911) ENSACAG00000013807 CFAP100 (ENSACAG00000013872) ENSACAG00000013744 ENSACAG00000013682 CHCHD4 (ENSACAG00000013659) #17 TMEM43 (ENSACAG00000013570) #18 XPC (ENSACAG00000013515) #19 LSM3 (ENSACAG00000013503) ENSACAG00000040167 ENSACAG00000038707 ENSACAG00000037760 SLC6A6 (ENSACAG00000013426) #20 GRIP2 (ENSACAG00000013280) #21 ENSACAG00000043154 CCDC174 (ENSACAG00000011855) #22 C3orf20 (ENSACAG00000011942) #23 ENSACAG00000036348 FGD5 (ENSACAG00000011946) #24 NR2C2 (ENSACAG00000012082) #25 ENSACAG00000012285 #26 ENSACAG00000012305 #27 trh (ENSACAG00000043370) #28 ENSACAG00000009849 ENSACAG00000034877 ENSACAG00000045588 ENSACAG00000043925 ENSACAG00000040711 ENSACAG00000029600 EDEM1 (ENSACAG00000012377) ARL8B (ENSACAG00000045374) tuatara MODERN SPECIES 1257 CFAP100 (ENSSPUG00000016909) ENSSPUG00000016974 UROC1 (ENSSPUG00000016988) CHCHD4 (ENSSPUG00000017007) #17 TMEM43 (ENSSPUG00000017015) #18 XPC (ENSSPUG00000017028) #19 ENSSPUG00000017047 ENSSPUG00000017055 #20 ENSSPUG00000017063 #20 GRIP2 (ENSSPUG00000017068) #21 CCDC174 (ENSSPUG00000017085) #22 FGD5 (ENSSPUG00000017109) #24 NR2C2 (ENSSPUG00000017164) #25 MRPS25 (ENSSPUG00000017201) #26 RBSN (ENSSPUG00000017211) #27 TRH (ENSSPUG00000017236) #28 ENSSPUG00000017245 #29 ENSSPUG00000017249 #29 PLXND1 (ENSSPUG00000017263) #30 RHO (ENSSPUG00000017307) #32 IFT122 (ENSSPUG00000017322) #33 MBD4 (ENSSPUG00000017344) #34 ENSSPUG00000017356 CAND2 (ENSSPUG00000017390) #10 SEC13 (ENSSPUG00000017415) GHRL (ENSSPUG00000017426) Archelosauria ANCESTRAL SPECIES 17 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 Archosauria ANCESTRAL SPECIES 24 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596 Aves ANCESTRAL SPECIES 29 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596 Neognathae ANCESTRAL SPECIES 27 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596 Galloanserae ANCESTRAL SPECIES 26 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596 Anatidae ANCESTRAL SPECIES 48 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794.f ENSGT00640000091554 Pink-footed goose MODERN SPECIES 95 PLXNA1 (ENSABRG00000009694) TXNRD3 (ENSABRG00000009756) CHST13 (ENSABRG00000009793) SLC41A3 (ENSABRG00000009804) KLF15 (ENSABRG00000009826) CFAP100 (ENSABRG00000009839) ENSABRG00000009849 UROC1 (ENSABRG00000009894) ENSABRG00000010289 CHCHD4 (ENSABRG00000010300) #17 TMEM43 (ENSABRG00000010309) #18 XPC (ENSABRG00000010322) #19 LSM3 (ENSABRG00000010342) SLC6A6 (ENSABRG00000010361) #20 GRIP2 (ENSABRG00000010376) #21 CCDC174 (ENSABRG00000010419) #22 ENSABRG00000010428 PLXNB1 (ENSABRG00000010769) ##30 ENSABRG00000014227 SETD5 (ENSABRG00000014274) LHFPL4 (ENSABRG00000014419) MTMR14 (ENSABRG00000014446) CPNE9 (ENSABRG00000014831) BRPF1 (ENSABRG00000014857) OGG1 (ENSABRG00000014998) Duck MODERN SPECIES 4 ENSAPLG00000022758 TXNRD3 (ENSAPLG00000011990) CHST13 (ENSAPLG00000012574) SLC41A3 (ENSAPLG00000012578) KLF15 (ENSAPLG00000012971) ENSAPLG00000012975 ENSAPLG00000013039 UROC1 (ENSAPLG00000013109) ENSAPLG00000013935 CHCHD4 (ENSAPLG00000021688) #17 TMEM43 (ENSAPLG00000013959) #18 XPC (ENSAPLG00000014249) #19 LSM3 (ENSAPLG00000014499) SLC6A6 (ENSAPLG00000011407) #20 GRIP2 (ENSAPLG00000010553) #21 CCDC174 (ENSAPLG00000010346) #22 ENSAPLG00000010242 PLXNB1 (ENSAPLG00000008562) ##30 ENSAPLG00000022004 SETD5 (ENSAPLG00000007096) LHFPL4 (ENSAPLG00000019972) ENSAPLG00000028999 MTMR14 (ENSAPLG00000006428) IHO1 (ENSAPLG00000016107) KLHDC8B (ENSAPLG00000019922) ENSAPLG00000030196 ENSAPLG00000029637 LAMB2 (ENSAPLG00000008249) USP19 (ENSAPLG00000007654) ENSAPLG00000030026 ENSAPLG00000030295 Phasianidae ANCESTRAL SPECIES 16 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596.i Phasianidae_b ANCESTRAL SPECIES 16 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596.i Chicken MODERN SPECIES 3 PLXNA1 (ENSGALG00010022196) TXNRD3 (ENSGALG00010021129) CHST13 (ENSGALG00010021154) SLC41A3 (ENSGALG00010021164) KLF15 (ENSGALG00010021173) CFAP100 (ENSGALG00010021183) ENSGALG00010021190 UROC1 (ENSGALG00010021202) NTN4L (ENSGALG00010021222) CHCHD4 (ENSGALG00010021227) #17 TMEM43 (ENSGALG00010021241) #18 XPC (ENSGALG00010021252) #19 LSM3 (ENSGALG00010021258) SLC6A6 (ENSGALG00010021320) #20 GRIP2 (ENSGALG00010021367) #21 CCDC174 (ENSGALG00010021393) #22 ENSGALG00010021402 PLXNB3 (ENSGALG00010021420) ##30 ENSGALG00010021433 SETD5 (ENSGALG00010021462) LHFPL4 (ENSGALG00010021467) MTMR14 (ENSGALG00010021496) CPNE9 (ENSGALG00010021512) BRPF1 (ENSGALG00010021528) OGG1 (ENSGALG00010021546) CAMK1 (ENSGALG00010021556) TADA3 (ENSGALG00010021568) ARPC4 (ENSGALG00010021599) ENSGALG00010021603 ENSGALG00010021616 RPUSD3 (ENSGALG00010021646) Turkey MODERN SPECIES 5 ENSMGAG00000007508 ENSMGAG00000007529 ENSMGAG00000007567 SLC41A3 (ENSMGAG00000007576) KLF15 (ENSMGAG00000007616) CFAP100 (ENSMGAG00000007620) ENSMGAG00000007639 UROC1 (ENSMGAG00000007651) ENSMGAG00000007685 CHCHD4 (ENSMGAG00000021277) #17 TMEM43 (ENSMGAG00000007717) #18 XPC (ENSMGAG00000007750) #19 LSM3 (ENSMGAG00000007776) SLC6A6 (ENSMGAG00000007825) #20 GRIP2 (ENSMGAG00000007781) #21 CCDC174 (ENSMGAG00000007861) #22 ENSMGAG00000007891 ENSMGAG00000016407 ##30 ENSMGAG00000008000 SETD5 (ENSMGAG00000007897) LHFPL4 (ENSMGAG00000008224) MTMR14 (ENSMGAG00000008243) CPNE9 (ENSMGAG00000008248) BRPF1 (ENSMGAG00000008276) OGG1 (ENSMGAG00000008346) CAMK1 (ENSMGAG00000008359) TADA3 (ENSMGAG00000008391) TTLL3 (ENSMGAG00000008412) JAGN1 (ENSMGAG00000016819) CRELD1 (ENSMGAG00000008449) ENSMGAG00000008459 Japanese quail MODERN SPECIES 3 PLXNA1 (ENSCJPG00005013965) TXNRD3 (ENSCJPG00005015989) CHST13 (ENSCJPG00005015991) SLC41A3 (ENSCJPG00005015992) KLF15 (ENSCJPG00005016002) CFAP100 (ENSCJPG00005016005) ENSCJPG00005016011 UROC1 (ENSCJPG00005016013) ENSCJPG00005016121 CHCHD4 (ENSCJPG00005016122) #17 TMEM43 (ENSCJPG00005016123) #18 XPC (ENSCJPG00005016125) #19 LSM3 (ENSCJPG00005016126) SLC6A6 (ENSCJPG00005016131) #20 GRIP2 (ENSCJPG00005016132) #21 CCDC174 (ENSCJPG00005016139) #22 ENSCJPG00005016142 PLXNB1 (ENSCJPG00005016149) ##30 ENSCJPG00005016486 SETD5 (ENSCJPG00005016488) LHFPL4 (ENSCJPG00005016490) MTMR14 (ENSCJPG00005016493) BRPF1 (ENSCJPG00005016572) TADA3 (ENSCJPG00005016577) ARPC4 (ENSCJPG00005016578) ENSCJPG00005016579 ENSCJPG00005016580 JAGN1 (ENSCJPG00005016581) ENSCJPG00005016582 ENSCJPG00005016583 CRELD1 (ENSCJPG00005016584) Neognathae_b ANCESTRAL SPECIES 18 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596 Passeriformes ANCESTRAL SPECIES 16 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857.j ENSGT00940000154857.i.b ENSGT00940000161059 Great tit MODERN SPECIES 3 PLXNA1 (ENSPMJG00000012816) TXNRD3 (ENSPMJG00000012818) CHST13 (ENSPMJG00000012820) SLC41A3 (ENSPMJG00000012821) KLF15 (ENSPMJG00000012823) CFAP100 (ENSPMJG00000012824) ENSPMJG00000012825 UROC1 (ENSPMJG00000012826) ENSPMJG00000012828 CHCHD4 (ENSPMJG00000012829) #17 TMEM43 (ENSPMJG00000012830) #18 XPC (ENSPMJG00000012831) #19 LSM3 (ENSPMJG00000013238) SLC6A6 (ENSPMJG00000013240) #20 GRIP2 (ENSPMJG00000013242) #21 CCDC174 (ENSPMJG00000013243) #22 ENSPMJG00000013244 PLXNB1 (ENSPMJG00000013245) ##30 ENSPMJG00000013246 SETD5 (ENSPMJG00000013247) LHFPL4 (ENSPMJG00000013248) MTMR14 (ENSPMJG00000000060) CPNE9 (ENSPMJG00000000178) BRPF1 (ENSPMJG00000004808) OGG1 (ENSPMJG00000004826) CAMK1 (ENSPMJG00000004837) TADA3 (ENSPMJG00000004841) ARPC4 (ENSPMJG00000004843) ENSPMJG00000004848 ENSPMJG00000004853 RPUSD3 (ENSPMJG00000004855) Passeriformes_d ANCESTRAL SPECIES 16 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857.i.b ENSGT00940000161059 ENSGT00390000005596 Flycatcher MODERN SPECIES 3 ENSFALG00000007849 ENSFALG00000007847 CHST13 (ENSFALG00000026839) SLC41A3 (ENSFALG00000002080) KLF15 (ENSFALG00000012601) CFAP100 (ENSFALG00000012603) ENSFALG00000012609 UROC1 (ENSFALG00000012619) ENSFALG00000012626 CHCHD4 (ENSFALG00000028192) #17 TMEM43 (ENSFALG00000012635) #18 XPC (ENSFALG00000012642) #19 LSM3 (ENSFALG00000012644) SLC6A6 (ENSFALG00000012649) #20 GRIP2 (ENSFALG00000012656) #21 CCDC174 (ENSFALG00000012673) #22 ENSFALG00000012697 ENSFALG00000012708 ##30 ENSFALG00000012724 SETD5 (ENSFALG00000012742) LHFPL4 (ENSFALG00000012751) MTMR14 (ENSFALG00000012764) CPNE9 (ENSFALG00000012801) BRPF1 (ENSFALG00000012865) OGG1 (ENSFALG00000026178) CAMK1 (ENSFALG00000012913) TADA3 (ENSFALG00000012939) ENSFALG00000023767 ENSFALG00000012953 TTLL3 (ENSFALG00000012960) RPUSD3 (ENSFALG00000012968) Passeriformes_g ANCESTRAL SPECIES 16 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857.i.b ENSGT00940000161059 ENSGT00390000005596 Passeroidea ANCESTRAL SPECIES 16 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00940000154857.j ENSGT00940000154857.i.b ENSGT00940000161059 ENSGT00390000005596 Common canary MODERN SPECIES 15 TXNRD3 (ENSSCAG00000004795) CHST13 (ENSSCAG00000004805) SLC41A3 (ENSSCAG00000004815) ENSSCAG00000004841 #21 SLC6A6 (ENSSCAG00000004898) #20 LSM3 (ENSSCAG00000004937) XPC (ENSSCAG00000004942) #19 TMEM43 (ENSSCAG00000004954) #18 CHCHD4 (ENSSCAG00000004966) #17 ENSSCAG00000004983 UROC1 (ENSSCAG00000004991) ENSSCAG00000005009 CFAP100 (ENSSCAG00000005018) KLF15 (ENSSCAG00000005028) ENSSCAG00000005035 #21 CCDC174 (ENSSCAG00000005056) #22 ENSSCAG00000005064 PLXNB1 (ENSSCAG00000005074) ##30 SETD5 (ENSSCAG00000005092) LHFPL4 (ENSSCAG00000005099) MTMR14 (ENSSCAG00000005116) CPNE9 (ENSSCAG00000005223) BRPF1 (ENSSCAG00000005459) ENSSCAG00000005462 CAMK1 (ENSSCAG00000005466) ARPC4 (ENSSCAG00000005470) TADA3 (ENSSCAG00000005474) ENSSCAG00000005478 ENSSCAG00000005480 JAGN1 (ENSSCAG00000005482) ENSSCAG00000005485 Zebra finch MODERN SPECIES 3 PLXNA1 (ENSTGUG00000008067) TXNRD3 (ENSTGUG00000008152) CHST13 (ENSTGUG00000008191) SLC41A3 (ENSTGUG00000008199) KLF15 (ENSTGUG00000008214) CFAP100 (ENSTGUG00000008217) ENSTGUG00000018312 UROC1 (ENSTGUG00000008227) ENSTGUG00000008258 CHCHD4 (ENSTGUG00000008273) #17 TMEM43 (ENSTGUG00000008280) #18 XPC (ENSTGUG00000008307) #19 LSM3 (ENSTGUG00000008327) SLC6A6 (ENSTGUG00000008337) #20 GRIP2 (ENSTGUG00000008370) #21 CCDC174 (ENSTGUG00000008404) #22 ENSTGUG00000008430 PLXNB1 (ENSTGUG00000008434) ##30 ENSTGUG00000008493 SETD5 (ENSTGUG00000008497) LHFPL4 (ENSTGUG00000008520) MTMR14 (ENSTGUG00000008521) CPNE9 (ENSTGUG00000008549) BRPF1 (ENSTGUG00000008601) OGG1 (ENSTGUG00000008637) CAMK1 (ENSTGUG00000008649) TADA3 (ENSTGUG00000008689) ENSTGUG00000026741 ENSTGUG00000025146 RPUSD3 (ENSTGUG00000008744) JAGN1 (ENSTGUG00000008751) Medium ground finch MODERN SPECIES 20 PLXNA1 (ENSGFOG00000009131) TXNRD3 (ENSGFOG00000009020) CHST13 (ENSGFOG00000009013) SLC41A3 (ENSGFOG00000008999) KLF15 (ENSGFOG00000008995) CFAP100 (ENSGFOG00000008967) ENSGFOG00000008953 UROC1 (ENSGFOG00000008934) ENSGFOG00000008926 CHCHD4 (ENSGFOG00000008917) #17 TMEM43 (ENSGFOG00000008907) #18 XPC (ENSGFOG00000008887) #19 LSM3 (ENSGFOG00000008878) SLC6A6 (ENSGFOG00000008866) #20 GRIP2 (ENSGFOG00000008742) #21 CCDC174 (ENSGFOG00000008699) #22 ENSGFOG00000008694 PLXNB1 (ENSGFOG00000008673) ##30 ENSGFOG00000008661 SETD5 (ENSGFOG00000008643) LHFPL4 (ENSGFOG00000008631) MTMR14 (ENSGFOG00000007348) CPNE9 (ENSGFOG00000007031) BRPF1 (ENSGFOG00000006985) OGG1 (ENSGFOG00000006977) CAMK1 (ENSGFOG00000006965) TADA3 (ENSGFOG00000006954) ARPC4 (ENSGFOG00000006945) ENSGFOG00000006935 JAGN1 (ENSGFOG00000006928) RPUSD3 (ENSGFOG00000006920) Neognathae_c ANCESTRAL SPECIES 21 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000164287 ENSGT01020000230394.e.a.a.b.a.a.a ##30 ENSGT00940000166769 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000005596 Kakapo MODERN SPECIES 3 ENSSHBG00005018503 TXNRD3 (ENSSHBG00005018495) CHST13 (ENSSHBG00005018491) SLC41A3 (ENSSHBG00005018487) KLF15 (ENSSHBG00005018483) CFAP100 (ENSSHBG00005018478) ENSSHBG00005018469 UROC1 (ENSSHBG00005018461) ENSSHBG00005018453 CHCHD4 (ENSSHBG00005018450) #17 TMEM43 (ENSSHBG00005018350) #18 XPC (ENSSHBG00005018333) #19 LSM3 (ENSSHBG00005018328) SLC6A6 (ENSSHBG00005018320) #20 GRIP2 (ENSSHBG00005012176) #21 CCDC174 (ENSSHBG00005011251) #22 ENSSHBG00005011218 PLXNB1 (ENSSHBG00005011134) ##30 ENSSHBG00005011061 SETD5 (ENSSHBG00005010990) LHFPL4 (ENSSHBG00005010960) ENSSHBG00005010933 ENSSHBG00005010893 CPNE9 (ENSSHBG00005010789) BRPF1 (ENSSHBG00005010734) OGG1 (ENSSHBG00005010686) CAMK1 (ENSSHBG00005010646) TADA3 (ENSSHBG00005010597) ENSSHBG00005010558 RPUSD3 (ENSSHBG00005010534) JAGN1 (ENSSHBG00005000972) Golden eagle MODERN SPECIES 12 PLXNA1 (ENSACCG00020009421) TXNRD3 (ENSACCG00020009439) CHST13 (ENSACCG00020009455) SLC41A3 (ENSACCG00020009488) KLF15 (ENSACCG00020009511) ENSACCG00020009520 ENSACCG00020009560 UROC1 (ENSACCG00020009609) ENSACCG00020009642 CHCHD4 (ENSACCG00020009661) #17 TMEM43 (ENSACCG00020009687) #18 XPC (ENSACCG00020009715) #19 LSM3 (ENSACCG00020009737) SLC6A6 (ENSACCG00020009777) #20 GRIP2 (ENSACCG00020009829) #21 CCDC174 (ENSACCG00020009869) #22 ENSACCG00020009886 PLXNB1 (ENSACCG00020010008) ##30 ENSACCG00020010058 SETD5 (ENSACCG00020010077) LHFPL4 (ENSACCG00020010097) MTMR14 (ENSACCG00020010128) CPNE9 (ENSACCG00020010159) BRPF1 (ENSACCG00020010185) OGG1 (ENSACCG00020010217) CAMK1 (ENSACCG00020010247) TADA3 (ENSACCG00020010271) ARPC4 (ENSACCG00020010285) TTLL3 (ENSACCG00020010308) RPUSD3 (ENSACCG00020010325) JAGN1 (ENSACCG00020010336) African ostrich MODERN SPECIES 416 ENSSCUG00000007852 CHST13 (ENSSCUG00000007851) SLC41A3 (ENSSCUG00000007848) ENSSCUG00000007845 KLF15 (ENSSCUG00000007844) CFAP100 (ENSSCUG00000007841) ENSSCUG00000007837 UROC1 (ENSSCUG00000007832) ENSSCUG00000007828 CHCHD4 (ENSSCUG00000007826) #17 TMEM43 (ENSSCUG00000007824) #18 XPC (ENSSCUG00000007813) #19 LSM3 (ENSSCUG00000007808) SLC6A6 (ENSSCUG00000007800) #20 GRIP2 (ENSSCUG00000007789) #21 CCDC174 (ENSSCUG00000007782) #22 ENSSCUG00000007781 PLXNB1 (ENSSCUG00000007779) ##30 ENSSCUG00000007777 SETD5 (ENSSCUG00000007776) MTMR14 (ENSSCUG00000007765) BRPF1 (ENSSCUG00000007763) TADA3 (ENSSCUG00000007762) ARPC4 (ENSSCUG00000007761) JAGN1 (ENSSCUG00000007758) Australian saltwater crocodile MODERN SPECIES 37 PLXNA1 (ENSCPRG00005018072) TXNRD3 (ENSCPRG00005017900) CHST13 (ENSCPRG00005017822) SLC41A3 (ENSCPRG00005017815) KLF15 (ENSCPRG00005017808) CFAP100 (ENSCPRG00005017801) ENSCPRG00005017797 UROC1 (ENSCPRG00005017780) ENSCPRG00005017757 CHCHD4 (ENSCPRG00005017745) #17 TMEM43 (ENSCPRG00005017741) #18 XPC (ENSCPRG00005017622) #19 LSM3 (ENSCPRG00005017591) SLC6A6 (ENSCPRG00005017580) #20 GRIP2 (ENSCPRG00005017528) #21 CCDC174 (ENSCPRG00005017505) #22 ENSCPRG00005017494 PLXNB1 (ENSCPRG00005017218) ##30 ENSCPRG00005017131 SETD5 (ENSCPRG00005017027) LHFPL4 (ENSCPRG00005016996) MTMR14 (ENSCPRG00005016989) ENSCPRG00005016986 BRPF1 (ENSCPRG00005016983) CAMK1 (ENSCPRG00005016975) TADA3 (ENSCPRG00005016965) ARPC4 (ENSCPRG00005016960) ENSCPRG00005016957 RPUSD3 (ENSCPRG00005016952) IL17RE (ENSCPRG00005016941) ENSCPRG00005016935 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 Emydidae ANCESTRAL SPECIES 13 ENSGT01050000244850.A.b ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 Three-toed box turtle MODERN SPECIES 33 CHCHD6 (ENSTMTG00000010204) PLXNA1 (ENSTMTG00000010144) TXNRD3 (ENSTMTG00000010077) CHST13 (ENSTMTG00000010062) SLC41A3 (ENSTMTG00000010025) KLF15 (ENSTMTG00000010012) CFAP100 (ENSTMTG00000009787) ENSTMTG00000009694 UROC1 (ENSTMTG00000009635) ENSTMTG00000009407 CHCHD4 (ENSTMTG00000020171) #17 TMEM43 (ENSTMTG00000020161) #18 XPC (ENSTMTG00000020128) #19 SLC6A6 (ENSTMTG00000020095) #20 GRIP2 (ENSTMTG00000020040) #21 CCDC174 (ENSTMTG00000020018) #22 C3orf20 (ENSTMTG00000019995) #23 FGD5 (ENSTMTG00000019978) #24 NR2C2 (ENSTMTG00000019882) #25 MRPS25 (ENSTMTG00000019859) #26 RBSN (ENSTMTG00000019843) #27 TMCC1 (ENSTMTG00000019834) #29 PLXND1 (ENSTMTG00000019795) #30 RHO (ENSTMTG00000019780) #32 IFT122 (ENSTMTG00000019743) #33 MBD4 (ENSTMTG00000019713) #34 ENSTMTG00000019685 #35 ENSTMTG00000019675 CAND2 (ENSTMTG00000019657) #10 SEC13 (ENSTMTG00000019636) GHRL (ENSTMTG00000019620) painted turtle MODERN SPECIES 699 TXNRD3 (ENSCPBG00000014404) CHST13 (ENSCPBG00000014414) SLC41A3 (ENSCPBG00000014419) KLF15 (ENSCPBG00000014431) CFAP100 (ENSCPBG00000014435) ENSCPBG00000014442 UROC1 (ENSCPBG00000014452) ENSCPBG00000014510 CHCHD4 (ENSCPBG00000014513) #17 TMEM43 (ENSCPBG00000014515) #18 XPC (ENSCPBG00000014521) #19 LSM3 (ENSCPBG00000014531) ENSCPBG00000014537 SLC6A6 (ENSCPBG00000014544) #20 GRIP2 (ENSCPBG00000014559) #21 CCDC174 (ENSCPBG00000014576) #22 C3orf20 (ENSCPBG00000014579) #23 FGD5 (ENSCPBG00000014583) #24 NR2C2 (ENSCPBG00000014597) #25 MRPS25 (ENSCPBG00000014615) #26 RBSN (ENSCPBG00000014619) #27 TRH (ENSCPBG00000014625) #28 TMCC1 (ENSCPBG00000014628) #29 ENSCPBG00000014630 PLXND1 (ENSCPBG00000014635) #30 ENSCPBG00000014657 #31 RHO (ENSCPBG00000014659) #32 IFT122 (ENSCPBG00000014673) #33 MBD4 (ENSCPBG00000014704) #34 ENSCPBG00000014711 #35 ENSCPBG00000014717 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000156977 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00940000158890 ENSGT00390000017740.a.b #10 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 21 CHST13 (ENSGEVG00005004550) SLC41A3 (ENSGEVG00005004799) KLF15 (ENSGEVG00005005641) ENSGEVG00005005658 ENSGEVG00005005681 ENSGEVG00005005723 UROC1 (ENSGEVG00005005863) ENSGEVG00005006079 ENSGEVG00005006318 CHCHD4 (ENSGEVG00005006339) #17 TMEM43 (ENSGEVG00005006361) #18 XPC (ENSGEVG00005006405) #19 LSM3 (ENSGEVG00005006455) SLC6A6 (ENSGEVG00005006475) #20 GRIP2 (ENSGEVG00005006526) #21 ENSGEVG00005006694 #22 C3orf20 (ENSGEVG00005006712) #23 FGD5 (ENSGEVG00005006787) #24 NR2C2 (ENSGEVG00005006949) #25 MRPS25 (ENSGEVG00005007010) #26 RBSN (ENSGEVG00005007029) #27 TRH (ENSGEVG00005007060) #28 TMCC1 (ENSGEVG00005007088) #29 ENSGEVG00005007103 #30 ENSGEVG00005007135 #30 RHO (ENSGEVG00005007149) #32 IFT122 (ENSGEVG00005007237) #33 MBD4 (ENSGEVG00005007387) #34 ENSGEVG00005007414 #35 ENSGEVG00005007461 CAND2 (ENSGEVG00005007489) #10 Goode s thornscrub tortoise MODERN SPECIES 18 SRP14 (ENSGEVG00005006841) EIF2AK4 (ENSGEVG00005006683) GPR176 (ENSGEVG00005006647) THBS1 (ENSGEVG00005006621) ENSGEVG00005006603 KATNBL1 (ENSGEVG00005006584) EMC7 (ENSGEVG00005006565) ENSGEVG00005006546 CHRM5 (ENSGEVG00005006527) AVEN (ENSGEVG00005006515) RYR3 (ENSGEVG00005004160) ENSGEVG00005003675 FMN1 (ENSGEVG00005003628) GREM1 (ENSGEVG00005003607) SCG5 (ENSGEVG00005003595) ENSGEVG00005003579 #22 ENSGEVG00005003554 RASGRP1 (ENSGEVG00005003516) FAM98B (ENSGEVG00005003498) ENSGEVG00005003490 SPRED1 (ENSGEVG00005003482) MEIS2 (ENSGEVG00005003408) CDIN1 (ENSGEVG00005003379) DPH6 (ENSGEVG00005003336) ZNF770 (ENSGEVG00005003311) AQR (ENSGEVG00005003280) ACTC1 (ENSGEVG00005003255) ENSGEVG00005003247 STXBP6 (ENSGEVG00005003241) ENSGEVG00005003232 ENSGEVG00005003221 Abingdon island giant tortoise MODERN SPECIES 1018 TXNRD3 (ENSCABG00000004929) CHST13 (ENSCABG00000004927) SLC41A3 (ENSCABG00000004924) KLF15 (ENSCABG00000004921) ENSCABG00000004920 ENSCABG00000004919 ENSCABG00000004911 UROC1 (ENSCABG00000004831) ENSCABG00000004689 CHCHD4 (ENSCABG00000004680) #17 TMEM43 (ENSCABG00000004679) #18 XPC (ENSCABG00000004301) #19 LSM3 (ENSCABG00000004295) SLC6A6 (ENSCABG00000004290) #20 GRIP2 (ENSCABG00000004277) #21 CCDC174 (ENSCABG00000004271) #22 C3orf20 (ENSCABG00000004270) #23 FGD5 (ENSCABG00000004259) #24 NR2C2 (ENSCABG00000004178) #25 MRPS25 (ENSCABG00000004172) #26 RBSN (ENSCABG00000004167) #27 TRH (ENSCABG00000004165) #28 TMCC1 (ENSCABG00000004160) #29 PLXND1 (ENSCABG00000004151) #30 ENSCABG00000004148 #31 RHO (ENSCABG00000004147) #32 IFT122 (ENSCABG00000001571) #33 MBD4 (ENSCABG00000001485) #34 ENSCABG00000001478 #35 ENSCABG00000001473 CAND2 (ENSCABG00000000379) #10 Chinese turtle MODERN SPECIES 1835 SLC6A6 (ENSPSIG00000009043) #20 GRIP2 (ENSPSIG00000009010) #21 CCDC174 (ENSPSIG00000009004) #22 C3orf20 (ENSPSIG00000008963) #23 ENSPSIG00000008945 FGD5 (ENSPSIG00000008933) #24 NR2C2 (ENSPSIG00000008928) #25 MRPS25 (ENSPSIG00000008882) #26 RBSN (ENSPSIG00000008874) #27 TRH (ENSPSIG00000008868) #28 TMCC1 (ENSPSIG00000008825) #29 PLXND1 (ENSPSIG00000008008) #30 RHO (ENSPSIG00000007938) #32 IFT122 (ENSPSIG00000007925) #33 MBD4 (ENSPSIG00000007892) #34 ENSPSIG00000007825 #35 ENSPSIG00000007588 CAND2 (ENSPSIG00000007584) #10 Anura ANCESTRAL SPECIES 36 ENSGT00940000159178 ENSGT00940000161154 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.B ENSGT00940000164258 ENSGT00390000015136 ENSGT00940000165132 ENSGT00390000013132 #17 ENSGT00390000009671 #18 ENSGT00390000005194 #19 ENSGT00390000013951 ENSGT00940000154583 #20 ENSGT00940000155615 #21 ENSGT00440000033958 #22 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00940000160900 #31 ENSGT01030000234549.a.a.a.a.a.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.a #34 ENSGT00390000014874 #35 ENSGT00390000017740.a.b #10 Frog MODERN SPECIES 4 ENSXETG00000042479 chst13 (ENSXETG00000004794) slc41a3 (ENSXETG00000004787) aldh1l1 (ENSXETG00000011551) klf15 (ENSXETG00000011549) cfap100 (ENSXETG00000011548) zxdc (ENSXETG00000011547) uroc1 (ENSXETG00000011543) ENSXETG00000011542 chchd4 (ENSXETG00000025311) #17 tmem43 (ENSXETG00000011540) #18 xpc (ENSXETG00000033244) #19 lsm3 (ENSXETG00000043797) slc6a6 (ENSXETG00000011518) #20 grip2 (ENSXETG00000011516) #21 ccdc174 (ENSXETG00000004821) #22 fgd5 (ENSXETG00000004819) #24 nr2c2 (ENSXETG00000004817) #25 mrps25 (ENSXETG00000004816) #26 rbsn (ENSXETG00000004811) #27 trh (ENSXETG00000049045) #28 ENSXETG00000046812 tmcc1 (ENSXETG00000040781) #29 plxnd1 (ENSXETG00000001467) #30 h1-8 (ENSXETG00000001466) #31 ift122 (ENSXETG00000001463) #33 ENSXETG00000047236 mbd4 (ENSXETG00000026622) #34 ENSXETG00000038317 #35 cand2 (ENSXETG00000001455) #10 sec13 (ENSXETG00000001453) Leishan spiny toad MODERN SPECIES 72 CCDC174 (ENSLLEG00000025540) #22 ENSLLEG00000025706 Coelacanth MODERN SPECIES 636 CCDC174 (ENSLACG00000003678) #22 FGD5 (ENSLACG00000006660) #24 NR2C2 (ENSLACG00000008303) #25 MRPS25 (ENSLACG00000009006) #26 RBSN (ENSLACG00000009214) #27 TRH (ENSLACG00000009747) #28 ENSLACG00000011971 #29 PLXND1 (ENSLACG00000012134) #30 ENSLACG00000012953 #31 RHO (ENSLACG00000013050) #32 IFT122 (ENSLACG00000013147) #33 ENSLACG00000013513 ##34 ENSLACG00000013572 RPL32 (ENSLACG00000013692) #11 CAND2 (ENSLACG00000013720) #10 SEC13 (ENSLACG00000013908) Actinopterygii ANCESTRAL SPECIES 199 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00960000189798 ENSGT01030000234549.a.a.a.a.a.b.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.b.a ##34 ENSGT00390000009671 #18 ENSGT00390000005194 #19 Neopterygii ANCESTRAL SPECIES 75 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922 #24 ENSGT00940000158393 #25 ENSGT00640000091558 #26 ENSGT00390000007159 #27 ENSGT00390000016951 #28 ENSGT00940000155189 #29 ENSGT01020000230394.e.b.a #30 ENSGT00930000152979 ENSGT00960000189798 ENSGT01030000234549.a.a.a.a.a.b.b.b #32 ENSGT00390000001016.b #33 ENSGT00530000063687.b.a ##34 ENSGT00390000009671 #18 ENSGT00390000005194 #19 Osteoglossocephalai ANCESTRAL SPECIES 121 ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00940000157154.c ENSGT00940000165984 ENSGT00940000176938 ENSGT00940000157154.d ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00440000033958 #22 ENSGT00940000157922.b #24 ENSGT00940000155327.g ENSGT00390000011390 ENSGT00940000157363 ENSGT00940000153920.b ENSGT00940000153920.a.b.b ENSGT00940000154554.a Clupeocephala ANCESTRAL SPECIES 427 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922.a #24 ENSGT00940000155327.h Euteleosteomorpha ANCESTRAL SPECIES 43 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Acanthomorphata ANCESTRAL SPECIES 6 ENSGT00940000158308.b ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00950000183080.a.a.f ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00950000184693 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00950000184693 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Ovalentaria ANCESTRAL SPECIES 2 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00950000184693 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Aplocheiloidei ANCESTRAL SPECIES 12 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Mangrove rivulus MODERN SPECIES 34 B4GALNT1 (ENSKMAG00000019185) ARHGEF25 (ENSKMAG00000019208) ANKRD33 (ENSKMAG00000019237) prkag1 (ENSKMAG00000019317) rhebl1 (ENSKMAG00000019397) IKZF4 (ENSKMAG00000019423) rps26 (ENSKMAG00000019481) fkbp11 (ENSKMAG00000019505) arf3b (ENSKMAG00000019525) ERBB3 (ENSKMAG00000019542) pa2g4a (ENSKMAG00000019577) crbn (ENSKMAG00000019594) ENSKMAG00000019614 vhl (ENSKMAG00000019624) tatdn2 (ENSKMAG00000019633) ccdc174 (ENSKMAG00000019648) #22 ENSKMAG00000019698 #24 prkcda (ENSKMAG00000019781) RFT1 (ENSKMAG00000019831) mustn1a (ENSKMAG00000019892) ruvbl1 (ENSKMAG00000019865) eefsec (ENSKMAG00000019907) ENSKMAG00000019922 ENSKMAG00000019931 ENSKMAG00000019940 ENSKMAG00000019953 GATA2 (ENSKMAG00000019972) ENSKMAG00000019993 ENSKMAG00000020013 arpc4 (ENSKMAG00000020041) pfkfb4b (ENSKMAG00000020063) Turquoise killifish MODERN SPECIES 1619 B4GALNT1 (ENSNFUG00015009722) ENSNFUG00015009787 ENSNFUG00015010087 PRKAG1 (ENSNFUG00015010143) RHEBL1 (ENSNFUG00015010358) IKZF4 (ENSNFUG00015010384) rps26 (ENSNFUG00015010401) fkbp11 (ENSNFUG00015010413) arf3b (ENSNFUG00015010473) ERBB3 (ENSNFUG00015010558) PA2G4A (ENSNFUG00015011992) crbn (ENSNFUG00015012717) OLA.7339 (ENSNFUG00015012776) VHL (ENSNFUG00015012781) tatdn2 (ENSNFUG00015012793) ccdc174 (ENSNFUG00015012802) #22 ENSNFUG00015012850 #24 prkcda (ENSNFUG00015012984) RFT1 (ENSNFUG00015014367) mustn1a (ENSNFUG00015014567) RUVBL1 (ENSNFUG00015014618) EEFSEC (ENSNFUG00015014664) ENSNFUG00015014697 ENSNFUG00015014705 GATA2 (ENSNFUG00015014731) ENSNFUG00015014750 ENSNFUG00015014771 ENSNFUG00015014782 ENSNFUG00015014903 arpc4 (ENSNFUG00015014909) pfkfb4b (ENSNFUG00015015017) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00980000203442 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00980000203442 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Poecilia ANCESTRAL SPECIES 23 ENSGT00940000160422.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00980000203442 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 NAME_6 ANCESTRAL SPECIES 64 ENSGT00940000160422.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00980000203442 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Amazon molly MODERN SPECIES 357 ENSPFOG00000024157 prkag1 (ENSPFOG00000001212) ANKRD33 (ENSPFOG00000001011) rhebl1 (ENSPFOG00000001515) IKZF4 (ENSPFOG00000001552) rps26 (ENSPFOG00000001647) fkbp11 (ENSPFOG00000001688) arf3b (ENSPFOG00000001778) ENSPFOG00000001978 ENSPFOG00000023124 pa2g4a (ENSPFOG00000002512) crbn (ENSPFOG00000002686) ENSPFOG00000002784 vhl (ENSPFOG00000002802) tatdn2 (ENSPFOG00000002845) ccdc174 (ENSPFOG00000002880) #22 ENSPFOG00000003002 #24 prkcda (ENSPFOG00000003197) RFT1 (ENSPFOG00000003494) ruvbl1 (ENSPFOG00000003640) eefsec (ENSPFOG00000003748) GATA2 (ENSPFOG00000003826) ENSPFOG00000003907 ENSPFOG00000003934 arpc4 (ENSPFOG00000004431) pfkfb4b (ENSPFOG00000004001) ENSPFOG00000023383 MAPKAPK3 (ENSPFOG00000004461) uroc1 (ENSPFOG00000004662) CHCHD4 (ENSPFOG00000004849) #17 SEC61A1 (ENSPFOG00000004861) Sailfin molly MODERN SPECIES 1553 pa2g4a (ENSPLAG00000007038) ENSPLAG00000007020 crbn (ENSPLAG00000007014) ENSPLAG00000006999 vhl (ENSPLAG00000006989) tatdn2 (ENSPLAG00000006981) ccdc174 (ENSPLAG00000006970) #22 ENSPLAG00000006944 #24 prkcda (ENSPLAG00000006932) RFT1 (ENSPLAG00000006879) ENSPLAG00000000144 Guppy MODERN SPECIES 457 ARHGEF25 (ENSPREG00000012878) ANKRD33 (ENSPREG00000012853) prkag1 (ENSPREG00000012817) rhebl1 (ENSPREG00000012803) IKZF4 (ENSPREG00000012791) rps26 (ENSPREG00000012728) fkbp11 (ENSPREG00000012702) arf3b (ENSPREG00000012688) ERBB3 (ENSPREG00000012554) pa2g4a (ENSPREG00000012509) ENSPREG00000012495 crbn (ENSPREG00000012473) ENSPREG00000012462 vhl (ENSPREG00000012451) tatdn2 (ENSPREG00000012438) ccdc174 (ENSPREG00000012424) #22 ENSPREG00000012395 #24 prkcda (ENSPREG00000012364) RFT1 (ENSPREG00000012334) mustn1a (ENSPREG00000012306) ruvbl1 (ENSPREG00000012277) eefsec (ENSPREG00000012235) GATA2 (ENSPREG00000012188) ENSPREG00000012165 ENSPREG00000012148 arpc4 (ENSPREG00000012130) pfkfb4b (ENSPREG00000012097) MAPKAPK3 (ENSPREG00000011861) uroc1 (ENSPREG00000011719) CHCHD4 (ENSPREG00000011685) #17 SEC61A1 (ENSPREG00000011633) Platyfish MODERN SPECIES 12 ENSXMAG00000002026 ANKRD33 (ENSXMAG00000002024) prkag1 (ENSXMAG00000002012) rhebl1 (ENSXMAG00000002003) IKZF4 (ENSXMAG00000027871) rps26 (ENSXMAG00000029944) fkbp11 (ENSXMAG00000001985) arf3b (ENSXMAG00000001981) ERBB3 (ENSXMAG00000001930) pa2g4a (ENSXMAG00000001913) ENSXMAG00000022846 crbn (ENSXMAG00000027517) ENSXMAG00000001906 vhl (ENSXMAG00000027460) tatdn2 (ENSXMAG00000022737) ccdc174 (ENSXMAG00000001888) #22 ENSXMAG00000001881 #24 prkcda (ENSXMAG00000001861) RFT1 (ENSXMAG00000001855) ENSXMAG00000001853 ruvbl1 (ENSXMAG00000001847) eefsec (ENSXMAG00000001839) B4GALNT1 (ENSXMAG00000001838) GATA2 (ENSXMAG00000001837) ENSXMAG00000001834 ENSXMAG00000024665 arpc4 (ENSXMAG00000001822) pfkfb4b (ENSXMAG00000001803) ENSXMAG00000022685 MAPKAPK3 (ENSXMAG00000001781) uroc1 (ENSXMAG00000001764) NAME_4 ANCESTRAL SPECIES 7 ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00980000203442 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Sheepshead minnow MODERN SPECIES 568 crbn (ENSCVAG00000004928) ENSCVAG00000004952 vhl (ENSCVAG00000004961) ENSCVAG00000004969 ccdc174 (ENSCVAG00000005037) #22 ENSCVAG00000005207 #24 prkcda (ENSCVAG00000005293) RFT1 (ENSCVAG00000005315) ENSCVAG00000005327 ruvbl1 (ENSCVAG00000005356) eefsec (ENSCVAG00000005381) GATA2 (ENSCVAG00000005406) ENSCVAG00000005416 ENSCVAG00000005429 arpc4 (ENSCVAG00000005439) pfkfb4b (ENSCVAG00000005497) ENSCVAG00000005511 MAPKAPK3 (ENSCVAG00000005541) uroc1 (ENSCVAG00000005587) CHCHD4 (ENSCVAG00000005592) #17 Mummichog MODERN SPECIES 2206 ANKRD33 (ENSFHEG00000008306) prkag1 (ENSFHEG00000008281) rhebl1 (ENSFHEG00000008212) IKZF4 (ENSFHEG00000008170) rps26 (ENSFHEG00000008153) fkbp11 (ENSFHEG00000008143) arf3b (ENSFHEG00000008118) ENSFHEG00000008081 ERBB3 (ENSFHEG00000007977) pa2g4a (ENSFHEG00000007572) ENSFHEG00000007519 crbn (ENSFHEG00000007500) ENSFHEG00000007457 vhl (ENSFHEG00000007428) tatdn2 (ENSFHEG00000007416) ccdc174 (ENSFHEG00000007412) #22 ENSFHEG00000007379 #24 prkcda (ENSFHEG00000007356) RFT1 (ENSFHEG00000007214) mustn1a (ENSFHEG00000007204) ruvbl1 (ENSFHEG00000007195) eefsec (ENSFHEG00000007155) ENSFHEG00000007137 GATA2 (ENSFHEG00000000191) ENSFHEG00000007114 ENSFHEG00000007101 arpc4 (ENSFHEG00000007067) pfkfb4b (ENSFHEG00000007041) MAPKAPK3 (ENSFHEG00000006947) uroc1 (ENSFHEG00000006937) CHCHD4 (ENSFHEG00000006894) #17 Oryzias ANCESTRAL SPECIES 1 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Oryzias_b ANCESTRAL SPECIES 3 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b.a Indian medaka MODERN SPECIES 8 ENSOMEG00000009337 ENSOMEG00000009366 prkag1 (ENSOMEG00000009407) rhebl1 (ENSOMEG00000009463) IKZF4 (ENSOMEG00000009503) rps26 (ENSOMEG00000009517) fkbp11 (ENSOMEG00000009539) arf3b (ENSOMEG00000009575) ERBB3 (ENSOMEG00000009645) pa2g4a (ENSOMEG00000009706) crbn (ENSOMEG00000009747) ENSOMEG00000009762 ENSOMEG00000009770 vhl (ENSOMEG00000009781) tatdn2 (ENSOMEG00000009795) ccdc174 (ENSOMEG00000009826) #22 ENSOMEG00000009854 #24 ENSOMEG00000009869 prkcda (ENSOMEG00000009896) RFT1 (ENSOMEG00000009967) mustn1a (ENSOMEG00000010001) ruvbl1 (ENSOMEG00000000243) eefsec (ENSOMEG00000010071) GATA2 (ENSOMEG00000010106) ENSOMEG00000010122 ENSOMEG00000010156 pfkfb4b (ENSOMEG00000010240) MAPKAPK3 (ENSOMEG00000010281) ENSOMEG00000010297 #17 SEC61A1 (ENSOMEG00000010349) ENSOMEG00000010392 Javanese ricefish MODERN SPECIES 19 B4GALNT1 (ENSOJAG00000001422) ARHGEF25 (ENSOJAG00000001438) prkag1 (ENSOJAG00000001576) ENSOJAG00000002332 rhebl1 (ENSOJAG00000002341) IKZF4 (ENSOJAG00000002362) rps26 (ENSOJAG00000002388) fkbp11 (ENSOJAG00000002405) arf3b (ENSOJAG00000002455) ERBB3 (ENSOJAG00000002580) pa2g4a (ENSOJAG00000003091) crbn (ENSOJAG00000003167) ENSOJAG00000003266 vhl (ENSOJAG00000003270) tatdn2 (ENSOJAG00000003276) ccdc174 (ENSOJAG00000003285) #22 ENSOJAG00000003294 #24 prkcda (ENSOJAG00000003310) RFT1 (ENSOJAG00000003452) mustn1a (ENSOJAG00000003475) ruvbl1 (ENSOJAG00000003481) eefsec (ENSOJAG00000003500) GATA2 (ENSOJAG00000003510) ENSOJAG00000003525 ENSOJAG00000003567 arpc4 (ENSOJAG00000003750) pfkfb4b (ENSOJAG00000003926) ENSOJAG00000004212 MAPKAPK3 (ENSOJAG00000004224) CHCHD4 (ENSOJAG00000004548) #17 sec61a1 (ENSOJAG00000004601) Oryzias_a ANCESTRAL SPECIES 35 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b.c #17 ENSGT00390000003721.d.a.g.b.a Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000001618 ENSORLG00000026607 ANKRD33 (ENSORLG00000030617) prkag1 (ENSORLG00000001606) rhebl1 (ENSORLG00000001566) IKZF4 (ENSORLG00000001555) rps26 (ENSORLG00000001541) fkbp11 (ENSORLG00000001534) arf3b (ENSORLG00000025025) ENSORLG00000001520 pa2g4a (ENSORLG00000020187) crbn (ENSORLG00000001509) avpr2b.1 (ENSORLG00000001494) vhl (ENSORLG00000029469) tatdn2 (ENSORLG00000001485) ccdc174 (ENSORLG00000001476) #22 ENSORLG00000001453 #24 prkcda (ENSORLG00000001443) RFT1 (ENSORLG00000001407) mustn1a (ENSORLG00000022857) ruvbl1 (ENSORLG00000001398) eefsec (ENSORLG00000001377) gata2b (ENSORLG00000001368) ENSORLG00000001356 ENSORLG00000025153 ENSORLG00000001351 arpc4 (ENSORLG00000013369) pfkfb4b (ENSORLG00000001325) uroc1 (ENSORLG00000001299) CHCHD4 (ENSORLG00000025016) #17 sec61a1 (ENSORLG00000001257) Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00950000184693 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Cichlidae ANCESTRAL SPECIES 1 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00950000184693 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b.g ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000156107.e.b.h ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a.e ENSGT00940000155864.a.a.f ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b.g ENSGT00940000178607 ENSGT00940000156107.f ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a.e ENSGT00940000155864.a.a.f ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Haplochromini ANCESTRAL SPECIES 1 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b.g ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a.e ENSGT00940000155864.a.a.f ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Haplochromini_A ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b.g ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a.e ENSGT00940000155864.a.a.f ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Haplochromini_B ANCESTRAL SPECIES ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b.g.a ENSGT00940000156107.e.b.g.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a.e ENSGT00940000155864.a.a.f ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Zebra mbuna MODERN SPECIES 1108 ACVR1B (ENSMZEG00005008542) prkag1 (ENSMZEG00005008563) rhebl1 (ENSMZEG00005008595) IKZF4 (ENSMZEG00005008635) rps26 (ENSMZEG00005008647) fkbp11 (ENSMZEG00005008663) arf3b (ENSMZEG00005008684) ENSMZEG00005008727 ERBB3 (ENSMZEG00005008884) pa2g4a (ENSMZEG00005009163) crbn (ENSMZEG00005009180) ENSMZEG00005009226 vhl (ENSMZEG00005009242) tatdn2 (ENSMZEG00005009247) ENSMZEG00005009255 ccdc174 (ENSMZEG00005009264) #22 ENSMZEG00005009274 #24 prkcda (ENSMZEG00005009298) RFT1 (ENSMZEG00005009342) ruvbl1 (ENSMZEG00005009354) ENSMZEG00005009368 eefsec (ENSMZEG00005009380) GATA2 (ENSMZEG00005009389) ENSMZEG00005009402 ENSMZEG00005009416 ENSMZEG00005009428 arpc4 (ENSMZEG00005009437) pfkfb4b (ENSMZEG00005009459) ENSMZEG00005009504 MAPKAPK3 (ENSMZEG00005009519) uroc1 (ENSMZEG00005009528) Eastern happy MODERN SPECIES 17 B4GALNT1 (ENSACLG00000025330) ENSACLG00000025197 ENSACLG00000025174 ACVR1B (ENSACLG00000025153) prkag1 (ENSACLG00000025108) rhebl1 (ENSACLG00000025097) IKZF4 (ENSACLG00000025032) rps26 (ENSACLG00000025004) fkbp11 (ENSACLG00000024997) arf3b (ENSACLG00000024971) ENSACLG00000024950 ENSACLG00000024862 vhl (ENSACLG00000024860) ENSACLG00000024846 ENSACLG00000024808 ccdc174 (ENSACLG00000024822) #22 ENSACLG00000024782 #24 prkcda (ENSACLG00000024706) RFT1 (ENSACLG00000024667) ENSACLG00000024642 ruvbl1 (ENSACLG00000024602) eefsec (ENSACLG00000024565) GATA2 (ENSACLG00000024538) ENSACLG00000024518 ENSACLG00000024502 ENSACLG00000024456 arpc4 (ENSACLG00000024447) pfkfb4b (ENSACLG00000024396) ENSACLG00000024379 MAPKAPK3 (ENSACLG00000024341) uroc1 (ENSACLG00000024312) P. nyererei MODERN SPECIES 405 ENSPNYG00000005247 pa2g4a (ENSPNYG00000005277) crbn (ENSPNYG00000005324) ENSPNYG00000005367 vhl (ENSPNYG00000005380) tatdn2 (ENSPNYG00000005395) ENSPNYG00000005438 ccdc174 (ENSPNYG00000005456) #22 ENSPNYG00000005504 #24 prkcda (ENSPNYG00000005574) RFT1 (ENSPNYG00000005652) ENSPNYG00000005663 ruvbl1 (ENSPNYG00000005685) eefsec (ENSPNYG00000005726) GATA2 (ENSPNYG00000005758) ENSPNYG00000005780 ENSPNYG00000005809 arpc4 (ENSPNYG00000005857) pfkfb4b (ENSPNYG00000005902) MAPKAPK3 (ENSPNYG00000005971) uroc1 (ENSPNYG00000005983) CHCHD4 (ENSPNYG00000006095) #17 sec61a1 (ENSPNYG00000006119) Burton s mouthbrooder MODERN SPECIES 665 ENSHBUG00000007964 ACVR1B (ENSHBUG00000008027) prkag1 (ENSHBUG00000008108) rhebl1 (ENSHBUG00000008154) IKZF4 (ENSHBUG00000008359) rps26 (ENSHBUG00000008397) fkbp11 (ENSHBUG00000000210) arf3b (ENSHBUG00000008446) ERBB3 (ENSHBUG00000008515) pa2g4a (ENSHBUG00000008558) crbn (ENSHBUG00000008570) ENSHBUG00000008584 vhl (ENSHBUG00000008607) tatdn2 (ENSHBUG00000008617) ENSHBUG00000008681 ccdc174 (ENSHBUG00000008659) #22 ENSHBUG00000008701 #24 prkcda (ENSHBUG00000008794) RFT1 (ENSHBUG00000008813) ENSHBUG00000008825 ruvbl1 (ENSHBUG00000008854) eefsec (ENSHBUG00000008917) GATA2 (ENSHBUG00000008946) ENSHBUG00000008988 ENSHBUG00000009014 ENSHBUG00000009027 arpc4 (ENSHBUG00000009048) pfkfb4b (ENSHBUG00000009150) MAPKAPK3 (ENSHBUG00000009166) uroc1 (ENSHBUG00000009232) ENSHBUG00000009239 #17 Lyretail cichlid MODERN SPECIES 484 ACVR1B (ENSNBRG00000016935) prkag1 (ENSNBRG00000016958) rhebl1 (ENSNBRG00000016978) IKZF4 (ENSNBRG00000017005) rps26 (ENSNBRG00000017072) fkbp11 (ENSNBRG00000017093) arf3b (ENSNBRG00000017218) ENSNBRG00000017493 ENSNBRG00000017501 pa2g4a (ENSNBRG00000017520) crbn (ENSNBRG00000017555) ENSNBRG00000017571 vhl (ENSNBRG00000017583) tatdn2 (ENSNBRG00000017590) ENSNBRG00000017614 ccdc174 (ENSNBRG00000017635) #22 ENSNBRG00000017681 #24 Nile tilapia MODERN SPECIES 17 prkag1 (ENSONIG00000019067) rhebl1 (ENSONIG00000032462) IKZF4 (ENSONIG00000031499) rps26 (ENSONIG00000019064) fkbp11 (ENSONIG00000031092) arf3 (ENSONIG00000035889) ENSONIG00000042669 ERBB3 (ENSONIG00000019052) pa2g4a (ENSONIG00000019051) crbn (ENSONIG00000019050) ENSONIG00000019049 vhl (ENSONIG00000041707) ENSONIG00000035105 tatdn2 (ENSONIG00000019047) ENSONIG00000019046 ccdc174 (ENSONIG00000019043) #22 ENSONIG00000019042 #24 prkcda (ENSONIG00000019041) RFT1 (ENSONIG00000019040) ENSONIG00000036686 ruvbl1 (ENSONIG00000019039) eefsec (ENSONIG00000019038) GATA2 (ENSONIG00000019037) ENSONIG00000038183 ENSONIG00000043190 arpc4 (ENSONIG00000027973) pfkfb4b (ENSONIG00000019031) MAPKAPK3 (ENSONIG00000019029) uroc1 (ENSONIG00000019028) CHCHD4 (ENSONIG00000029628) #17 sec61a1 (ENSONIG00000019026) Midas cichlid MODERN SPECIES 720 ACVR1B (ENSACIG00000023072) prkag1 (ENSACIG00000023062) rhebl1 (ENSACIG00000023051) IKZF4 (ENSACIG00000022983) rps26 (ENSACIG00000022944) fkbp11 (ENSACIG00000022905) arf3b (ENSACIG00000022896) ENSACIG00000022860 ENSACIG00000022811 pa2g4a (ENSACIG00000022784) crbn (ENSACIG00000022744) ENSACIG00000022730 vhl (ENSACIG00000022721) tatdn2 (ENSACIG00000022709) ENSACIG00000022594 ccdc174 (ENSACIG00000022551) #22 FGD5 (ENSACIG00000022524) #24 prkcda (ENSACIG00000022502) RFT1 (ENSACIG00000022470) mustn1a (ENSACIG00000022459) ruvbl1 (ENSACIG00000022419) ENSACIG00000022412 eefsec (ENSACIG00000022407) GATA2 (ENSACIG00000022400) ENSACIG00000022390 ENSACIG00000022381 ENSACIG00000022208 arpc4 (ENSACIG00000022164) pfkfb4b (ENSACIG00000022149) ENSACIG00000022142 MAPKAPK3 (ENSACIG00000021912) Pomacentridae ANCESTRAL SPECIES 3 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Amphiprion ANCESTRAL SPECIES 11 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00950000182925.C.a.b.d ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Orange clownfish MODERN SPECIES 20 ENSAPEG00000016103 ACVR1B (ENSAPEG00000016122) prkag1 (ENSAPEG00000016162) rhebl1 (ENSAPEG00000016212) IKZF4 (ENSAPEG00000016223) rps26 (ENSAPEG00000016251) fkbp11 (ENSAPEG00000016274) arf3b (ENSAPEG00000016302) ERBB3 (ENSAPEG00000016343) pa2g4a (ENSAPEG00000016538) crbn (ENSAPEG00000016593) ENSAPEG00000016641 vhl (ENSAPEG00000016667) ENSAPEG00000016673 ENSAPEG00000016686 ccdc174 (ENSAPEG00000016703) #22 ENSAPEG00000016754 ENSAPEG00000016777 #24 prkcda (ENSAPEG00000016934) RFT1 (ENSAPEG00000017021) ENSAPEG00000017034 ruvbl1 (ENSAPEG00000017040) eefsec (ENSAPEG00000017090) ENSAPEG00000017127 GATA2 (ENSAPEG00000017147) ENSAPEG00000017175 ENSAPEG00000017200 arpc4 (ENSAPEG00000017226) pfkfb4b (ENSAPEG00000017264) MAPKAPK3 (ENSAPEG00000017312) uroc1 (ENSAPEG00000017335) Clown anemonefish MODERN SPECIES 676 ACVR1B (ENSAOCG00000000402) prkag1 (ENSAOCG00000007481) rhebl1 (ENSAOCG00000007510) IKZF4 (ENSAOCG00000007531) rps26 (ENSAOCG00000007544) fkbp11 (ENSAOCG00000007559) arf3b (ENSAOCG00000007571) ENSAOCG00000007588 ERBB3 (ENSAOCG00000007874) pa2g4a (ENSAOCG00000007979) crbn (ENSAOCG00000008011) ENSAOCG00000008030 vhl (ENSAOCG00000008040) tatdn2 (ENSAOCG00000008055) ENSAOCG00000008259 ccdc174 (ENSAOCG00000000479) #22 FGD5 (ENSAOCG00000008381) #24 prkcda (ENSAOCG00000008454) RFT1 (ENSAOCG00000008512) ENSAOCG00000008529 ruvbl1 (ENSAOCG00000008561) eefsec (ENSAOCG00000008603) ENSAOCG00000008739 GATA2 (ENSAOCG00000008787) ENSAOCG00000000518 ENSAOCG00000008820 Spiny chromis MODERN SPECIES 97 ACVR1B (ENSAPOG00000015288) prkag1 (ENSAPOG00000015304) rhebl1 (ENSAPOG00000015316) IKZF4 (ENSAPOG00000015335) rps26 (ENSAPOG00000015371) fkbp11 (ENSAPOG00000000431) arf3b (ENSAPOG00000015419) ENSAPOG00000015444 ERBB3 (ENSAPOG00000015464) pa2g4a (ENSAPOG00000015521) crbn (ENSAPOG00000015568) ENSAPOG00000015579 vhl (ENSAPOG00000015587) ENSAPOG00000015604 ENSAPOG00000015625 ccdc174 (ENSAPOG00000015690) #22 ENSAPOG00000015700 #24 prkcda (ENSAPOG00000001005) RFT1 (ENSAPOG00000015802) ENSAPOG00000015826 ruvbl1 (ENSAPOG00000015885) eefsec (ENSAPOG00000015931) GATA2 (ENSAPOG00000015961) ENSAPOG00000016066 ENSAPOG00000016091 arpc4 (ENSAPOG00000016116) pfkfb4b (ENSAPOG00000016145) MAPKAPK3 (ENSAPOG00000000454) uroc1 (ENSAPOG00000016230) CHCHD4 (ENSAPOG00000016271) #17 sec61a1 (ENSAPOG00000016333) Bicolor damselfish MODERN SPECIES 1187 ENSSPAG00000001024 vhl (ENSSPAG00000001057) ENSSPAG00000001063 ENSSPAG00000001087 ccdc174 (ENSSPAG00000001104) #22 ENSSPAG00000001117 #24 prkcda (ENSSPAG00000001136) RFT1 (ENSSPAG00000001191) ruvbl1 (ENSSPAG00000001245) mustn1a (ENSSPAG00000001298) eefsec (ENSSPAG00000001320) GATA2 (ENSSPAG00000001362) ENSSPAG00000001383 ENSSPAG00000001423 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000175564 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000175564 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Anabantaria ANCESTRAL SPECIES ENSGT00940000160422.b ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000160422.b ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Climbing perch MODERN SPECIES 18 ARHGEF25 (ENSATEG00000001714) ENSATEG00000001733 ENSATEG00000001777 ENSATEG00000001841 ENSATEG00000001852 ENSATEG00000001893 fkbp11 (ENSATEG00000001919) arf3b (ENSATEG00000025182) ENSATEG00000001985 pa2g4a (ENSATEG00000002303) crbn (ENSATEG00000002348) ENSATEG00000002393 vhl (ENSATEG00000002425) tatdn2 (ENSATEG00000002430) ENSATEG00000002475 ccdc174 (ENSATEG00000002494) #22 ENSATEG00000002546 #24 ENSATEG00000002574 ENSATEG00000002648 mustn1a (ENSATEG00000002723) ruvbl1 (ENSATEG00000002676) eefsec (ENSATEG00000002753) GATA2 (ENSATEG00000002807) ENSATEG00000002816 ENSATEG00000002860 arpc4 (ENSATEG00000002977) pfkfb4b (ENSATEG00000002894) ENSATEG00000003007 ENSATEG00000003016 uroc1 (ENSATEG00000003022) ENSATEG00000026353 #17 Siamese fighting fish MODERN SPECIES 16 ACVR1B (ENSBSLG00000018015) prkag1 (ENSBSLG00000018297) rhebl1 (ENSBSLG00000019249) IKZF4 (ENSBSLG00000019303) rps26 (ENSBSLG00000019312) fkbp11 (ENSBSLG00000019317) arf3b (ENSBSLG00000019321) ENSBSLG00000019343 pa2g4a (ENSBSLG00000020108) crbn (ENSBSLG00000020189) ENSBSLG00000020284 vhl (ENSBSLG00000020287) ENSBSLG00000005353 ENSBSLG00000020300 ENSBSLG00000005362 ccdc174 (ENSBSLG00000005375) #22 ENSBSLG00000005487 #24 ENSBSLG00000005911 prkcda (ENSBSLG00000005927) RFT1 (ENSBSLG00000006079) mustn1a (ENSBSLG00000006315) ruvbl1 (ENSBSLG00000006353) eefsec (ENSBSLG00000006406) GATA2 (ENSBSLG00000006466) ENSBSLG00000006510 ENSBSLG00000006576 arpc4 (ENSBSLG00000006712) pfkfb4b (ENSBSLG00000007015) uroc1 (ENSBSLG00000009528) CHCHD4 (ENSBSLG00000009690) #17 sec61a1 (ENSBSLG00000009757) Zig-zag eel MODERN SPECIES 19 ARHGEF25 (ENSMAMG00000001844) ENSMAMG00000001804 ENSMAMG00000001764 ENSMAMG00000001748 ENSMAMG00000001733 ENSMAMG00000027370 fkbp11 (ENSMAMG00000001699) arf3b (ENSMAMG00000001681) ENSMAMG00000001029 pa2g4a (ENSMAMG00000000921) crbn (ENSMAMG00000026225) ENSMAMG00000000823 vhl (ENSMAMG00000000813) ENSMAMG00000024289 ENSMAMG00000000322 ccdc174 (ENSMAMG00000000318) #22 ENSMAMG00000000305 #24 ENSMAMG00000023968 ENSMAMG00000023967 ENSMAMG00000023966 ruvbl1 (ENSMAMG00000023965) eefsec (ENSMAMG00000023964) GATA2 (ENSMAMG00000023963) ENSMAMG00000023952 ENSMAMG00000023962 arpc4 (ENSMAMG00000023961) pfkfb4b (ENSMAMG00000023960) ENSMAMG00000023959 uroc1 (ENSMAMG00000023958) ENSMAMG00000023957 #17 sec61a1 (ENSMAMG00000023956) Carangaria ANCESTRAL SPECIES 3 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000175564 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Carangaria_A ANCESTRAL SPECIES 7 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000175564 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Seriola ANCESTRAL SPECIES 10 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000175564 ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Greater amberjack MODERN SPECIES 37 ANKRD33 (ENSSDUG00000007257) ACVR1B (ENSSDUG00000007268) prkag1 (ENSSDUG00000007297) rhebl1 (ENSSDUG00000007311) IKZF4 (ENSSDUG00000007335) rps26 (ENSSDUG00000007482) fkbp11 (ENSSDUG00000007495) arf3b (ENSSDUG00000007524) ERBB3 (ENSSDUG00000007540) pa2g4a (ENSSDUG00000007594) crbn (ENSSDUG00000007636) ENSSDUG00000007676 vhl (ENSSDUG00000007705) tatdn2 (ENSSDUG00000007710) ENSSDUG00000007720 ccdc174 (ENSSDUG00000007738) #22 ENSSDUG00000007751 #24 prkcda (ENSSDUG00000007800) RFT1 (ENSSDUG00000007862) ruvbl1 (ENSSDUG00000007880) ENSSDUG00000007915 eefsec (ENSSDUG00000007924) GATA2 (ENSSDUG00000007954) ENSSDUG00000007996 ENSSDUG00000008011 arpc4 (ENSSDUG00000008023) pfkfb4b (ENSSDUG00000008055) MAPKAPK3 (ENSSDUG00000008139) uroc1 (ENSSDUG00000008148) CHCHD4 (ENSSDUG00000008191) #17 sec61a1 (ENSSDUG00000008244) Yellowtail amberjack MODERN SPECIES 3054 ANKRD33 (ENSSLDG00000025209) ACVR1B (ENSSLDG00000025201) prkag1 (ENSSLDG00000025189) rhebl1 (ENSSLDG00000025169) IKZF4 (ENSSLDG00000025157) rps26 (ENSSLDG00000025152) fkbp11 (ENSSLDG00000025145) arf3b (ENSSLDG00000025143) ERBB3 (ENSSLDG00000025128) pa2g4a (ENSSLDG00000025118) crbn (ENSSLDG00000025110) ENSSLDG00000025106 vhl (ENSSLDG00000025103) ENSSLDG00000025101 ENSSLDG00000025098 ccdc174 (ENSSLDG00000025091) #22 ENSSLDG00000025052 #24 prkcda (ENSSLDG00000025034) RFT1 (ENSSLDG00000025029) mustn1a (ENSSLDG00000025025) ruvbl1 (ENSSLDG00000024997) eefsec (ENSSLDG00000024985) GATA2 (ENSSLDG00000024970) ENSSLDG00000024964 ENSSLDG00000024959 arpc4 (ENSSLDG00000024955) pfkfb4b (ENSSLDG00000024924) MAPKAPK3 (ENSSLDG00000024882) uroc1 (ENSSLDG00000024860) CHCHD4 (ENSSLDG00000024855) #17 sec61a1 (ENSSLDG00000024833) Barramundi perch MODERN SPECIES 44 prkag1 (ENSLCAG00010018042) rhebl1 (ENSLCAG00010018101) IKZF4 (ENSLCAG00010018107) rps26 (ENSLCAG00010018110) fkbp11 (ENSLCAG00010018115) arf3b (ENSLCAG00010018126) ENSLCAG00010018134 ENSLCAG00010018139 ENSLCAG00010018145 pa2g4a (ENSLCAG00010018150) crbn (ENSLCAG00010018158) ENSLCAG00010018171 vhl (ENSLCAG00010018175) tatdn2 (ENSLCAG00010018177) ENSLCAG00010018179 ccdc174 (ENSLCAG00010018180) #22 ENSLCAG00010018182 #24 prkcda (ENSLCAG00010018192) RFT1 (ENSLCAG00010018206) mustn1a (ENSLCAG00010018208) ruvbl1 (ENSLCAG00010018211) eefsec (ENSLCAG00010018214) GATA2 (ENSLCAG00010018215) ENSLCAG00010018216 ENSLCAG00010018218 arpc4 (ENSLCAG00010018226) pfkfb4b (ENSLCAG00010018308) MAPKAPK3 (ENSLCAG00010018383) Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000003721.d.a.g.b ENSGT00940000156310.o Tongue sole MODERN SPECIES 2 pfdn5 (ENSCSEG00000003247) ENSCSEG00000003240 atf7b (ENSCSEG00000003236) ENSCSEG00000003209 atf1 (ENSCSEG00000003207) METTL7B (ENSCSEG00000003205) mettl7a.3 (ENSCSEG00000003201) ENSCSEG00000003144 ENSCSEG00000003139 pa2g4a (ENSCSEG00000003130) ERBB3 (ENSCSEG00000003105) arf3b (ENSCSEG00000003101) crbn (ENSCSEG00000003091) ENSCSEG00000003087 vhl (ENSCSEG00000003086) ccdc174 (ENSCSEG00000003077) #22 ENSCSEG00000003073 #24 prkcda (ENSCSEG00000003057) RFT1 (ENSCSEG00000003052) ENSCSEG00000003050 ruvbl1 (ENSCSEG00000003041) GATA2 (ENSCSEG00000003034) eefsec (ENSCSEG00000003008) ENSCSEG00000002979 ENSCSEG00000002970 arpc4 (ENSCSEG00000002965) pfkfb4b (ENSCSEG00000002922) MAPKAPK3 (ENSCSEG00000002832) uroc1 (ENSCSEG00000002814) fancd2 (ENSCSEG00000002736) GPX1 (ENSCSEG00000002707) Turbot MODERN SPECIES 18 ENSSMAG00000002105 ENSSMAG00000002068 ENSSMAG00000001998 ENSSMAG00000001964 ENSSMAG00000001923 ENSSMAG00000026164 fkbp11 (ENSSMAG00000001886) arf3b (ENSSMAG00000001861) ENSSMAG00000001824 pa2g4a (ENSSMAG00000001806) crbn (ENSSMAG00000001794) ENSSMAG00000001787 vhl (ENSSMAG00000001782) tatdn2 (ENSSMAG00000001757) ENSSMAG00000001732 ccdc174 (ENSSMAG00000001684) #22 ENSSMAG00000037954 ENSSMAG00000001647 #24 ENSSMAG00000001563 ENSSMAG00000001519 ENSSMAG00000001507 ruvbl1 (ENSSMAG00000001493) eefsec (ENSSMAG00000001454) GATA2 (ENSSMAG00000001437) ENSSMAG00000001428 ENSSMAG00000011579 arpc4 (ENSSMAG00000025686) pfkfb4b (ENSSMAG00000001321) ENSSMAG00000001300 uroc1 (ENSSMAG00000001228) sec61a1 (ENSSMAG00000001194) Eupercaria ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00390000006679.a.e ENSGT00940000154766.a.b ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.h ENSGT00940000156310.o Fugu MODERN SPECIES 10 ENSTRUG00000012736 ANKRD33 (ENSTRUG00000012707) ACVR1B (ENSTRUG00000012480) prkag1 (ENSTRUG00000012309) ENSTRUG00000023226 rhebl1 (ENSTRUG00000020012) IKZF4 (ENSTRUG00000024276) rps26 (ENSTRUG00000012049) fkbp11 (ENSTRUG00000011977) arf3b (ENSTRUG00000027776) ERBB3 (ENSTRUG00000011645) pa2g4a (ENSTRUG00000011475) crbn (ENSTRUG00000011346) vhl (ENSTRUG00000020462) ENSTRUG00000024284 ccdc174 (ENSTRUG00000011187) #22 ENSTRUG00000011126 #24 prkcda (ENSTRUG00000010650) RFT1 (ENSTRUG00000010604) ENSTRUG00000025824 ruvbl1 (ENSTRUG00000010451) eefsec (ENSTRUG00000010327) GATA2 (ENSTRUG00000024174) ENSTRUG00000010242 ENSTRUG00000010082 arpc4 (ENSTRUG00000010022) pfkfb4b (ENSTRUG00000009609) MAPKAPK3 (ENSTRUG00000009365) ENSTRUG00000009075 #17 SEC61A1 (ENSTRUG00000008876) ip6k2b (ENSTRUG00000025042) Tetraodon MODERN SPECIES 2 os9 (ENSTNIG00000014584) B4GALNT1 (ENSTNIG00000014585) ENSTNIG00000014586 ENSTNIG00000014587 ARHGEF25 (ENSTNIG00000014588) ACVR1B (ENSTNIG00000014589) prkag1 (ENSTNIG00000014590) IKZF4 (ENSTNIG00000014592) rps26 (ENSTNIG00000014593) fkbp11 (ENSTNIG00000014594) ENSTNIG00000001370 arf3b (ENSTNIG00000014595) ERBB3 (ENSTNIG00000014596) pa2g4a (ENSTNIG00000014597) crbn (ENSTNIG00000014598) ccdc174 (ENSTNIG00000000038) #22 ENSTNIG00000014599 #24 prkcda (ENSTNIG00000014600) ENSTNIG00000014601 GATA2 (ENSTNIG00000014602) ENSTNIG00000014603 ENSTNIG00000014604 arpc4 (ENSTNIG00000014605) pfkfb4b (ENSTNIG00000014606) ENSTNIG00000014607 uroc1 (ENSTNIG00000014608) SEC61A1 (ENSTNIG00000014609) ENSTNIG00000014610 ENSTNIG00000014611 ENSTNIG00000014612 gnai2a (ENSTNIG00000014613) Eupecaria_A ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Ballan wrasse MODERN SPECIES 265 ARHGEF25 (ENSLBEG00000019340) ANKRD33 (ENSLBEG00000019305) ACVR1B (ENSLBEG00000019263) prkag1 (ENSLBEG00000019193) rhebl1 (ENSLBEG00000019137) IKZF4 (ENSLBEG00000019110) rps26 (ENSLBEG00000019037) fkbp11 (ENSLBEG00000019018) arf3b (ENSLBEG00000018992) ERBB3 (ENSLBEG00000018932) pa2g4a (ENSLBEG00000018581) crbn (ENSLBEG00000018403) ENSLBEG00000018390 vhl (ENSLBEG00000018383) ENSLBEG00000018363 ccdc174 (ENSLBEG00000018341) #22 ENSLBEG00000018259 #24 prkcda (ENSLBEG00000018188) RFT1 (ENSLBEG00000018042) ENSLBEG00000017983 ruvbl1 (ENSLBEG00000017947) eefsec (ENSLBEG00000017908) GATA2 (ENSLBEG00000017873) ENSLBEG00000017835 ENSLBEG00000017798 arpc4 (ENSLBEG00000017780) pfkfb4b (ENSLBEG00000017699) MAPKAPK3 (ENSLBEG00000017649) uroc1 (ENSLBEG00000017571) CHCHD4 (ENSLBEG00000017549) #17 sec61a1 (ENSLBEG00000017523) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 Perciformes ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Cottioidei ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Lumpfish MODERN SPECIES 20 ENSCLMG00005010279 ACVR1B (ENSCLMG00005010285) prkag1 (ENSCLMG00005010395) rhebl1 (ENSCLMG00005010981) IKZF4 (ENSCLMG00005010983) rps26 (ENSCLMG00005010985) fkbp11 (ENSCLMG00005010986) ENSCLMG00005010987 ERBB3 (ENSCLMG00005011003) pa2g4a (ENSCLMG00005017128) crbn (ENSCLMG00005017144) ENSCLMG00005017146 vhl (ENSCLMG00005017148) ENSCLMG00005017149 ENSCLMG00005017150 ccdc174 (ENSCLMG00005017152) #22 ENSCLMG00005017236 #24 prkcda (ENSCLMG00005017263) RFT1 (ENSCLMG00005018397) ENSCLMG00005018398 ruvbl1 (ENSCLMG00005018400) eefsec (ENSCLMG00005018401) GATA2 (ENSCLMG00005018403) ENSCLMG00005018405 ENSCLMG00005018408 arpc4 (ENSCLMG00005018429) pfkfb4b (ENSCLMG00005018450) uroc1 (ENSCLMG00005020798) CHCHD4 (ENSCLMG00005021070) #17 sec61a1 (ENSCLMG00005000137) ip6k2b (ENSCLMG00005000221) Stickleback MODERN SPECIES 281 ENSGACG00000000714 ANKRD33 (ENSGACG00000000718) ACVR1B (ENSGACG00000000719) prkag1 (ENSGACG00000000723) rhebl1 (ENSGACG00000000729) IKZF4 (ENSGACG00000000739) rps26 (ENSGACG00000000741) fkbp11 (ENSGACG00000000743) ARF3 (ENSGACG00000000746) ERBB3 (ENSGACG00000000747) crbn (ENSGACG00000000750) ENSGACG00000000754 vhl (ENSGACG00000000755) tatdn2 (ENSGACG00000000761) ENSGACG00000000762 ccdc174 (ENSGACG00000000764) #22 ENSGACG00000000766 #24 prkcda (ENSGACG00000000771) RFT1 (ENSGACG00000000786) ruvbl1 (ENSGACG00000000787) eefsec (ENSGACG00000000793) GATA2 (ENSGACG00000000801) ENSGACG00000000806 ENSGACG00000000807 arpc4 (ENSGACG00000000813) pfkfb4b (ENSGACG00000000815) ENSGACG00000000823 uroc1 (ENSGACG00000000824) CHCHD4 (ENSGACG00000000829) #17 sec61a1 (ENSGACG00000000830) ENSGACG00000000831 Perciformes_a ANCESTRAL SPECIES 5 ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000175564 ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00730000110895.a ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 Pike perch MODERN SPECIES 73 ANKRD33 (ENSSLUG00000018575) ACVR1B (ENSSLUG00000018455) prkag1 (ENSSLUG00000018265) rhebl1 (ENSSLUG00000018237) IKZF4 (ENSSLUG00000018233) rps26 (ENSSLUG00000018229) fkbp11 (ENSSLUG00000018226) arf3b (ENSSLUG00000018220) ERBB3 (ENSSLUG00000014443) pa2g4a (ENSSLUG00000014229) crbn (ENSSLUG00000014178) ENSSLUG00000014166 vhl (ENSSLUG00000014158) tatdn2 (ENSSLUG00000014150) ENSSLUG00000014145 ccdc174 (ENSSLUG00000014138) #22 FGD5 (ENSSLUG00000014124) #24 prkcda (ENSSLUG00000013140) RFT1 (ENSSLUG00000013055) ENSSLUG00000013046 ruvbl1 (ENSSLUG00000013042) eefsec (ENSSLUG00000013033) GATA2 (ENSSLUG00000013029) ENSSLUG00000013026 ENSSLUG00000013007 arpc4 (ENSSLUG00000012998) pfkfb4b (ENSSLUG00000012904) ENSSLUG00000012871 MAPKAPK3 (ENSSLUG00000012807) uroc1 (ENSSLUG00000012782) ENSSLUG00000012774 #17 Channel bull blenny MODERN SPECIES 19 ARHGEF25 (ENSCGOG00000004033) ENSCGOG00000004027 ACVR1B (ENSCGOG00000003587) prkag1 (ENSCGOG00000003053) rhebl1 (ENSCGOG00000002933) IKZF4 (ENSCGOG00000002929) rps26 (ENSCGOG00000002915) fkbp11 (ENSCGOG00000002906) arf3b (ENSCGOG00000002802) ERBB3 (ENSCGOG00000002634) pa2g4a (ENSCGOG00000022581) crbn (ENSCGOG00000022551) ENSCGOG00000022548 ENSCGOG00000022541 ENSCGOG00000022528 ccdc174 (ENSCGOG00000022524) #22 FGD5 (ENSCGOG00000022502) #24 prkcda (ENSCGOG00000021757) RFT1 (ENSCGOG00000021662) ENSCGOG00000021659 ruvbl1 (ENSCGOG00000021530) eefsec (ENSCGOG00000021525) GATA2 (ENSCGOG00000021520) ENSCGOG00000021518 ENSCGOG00000021486 arpc4 (ENSCGOG00000021484) pfkfb4b (ENSCGOG00000021353) MAPKAPK3 (ENSCGOG00000021124) uroc1 (ENSCGOG00000021104) CHCHD4 (ENSCGOG00000021102) #17 sec61a1 (ENSCGOG00000020503) Eupecaria_C ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Gilthead seabream MODERN SPECIES 20 ENSSAUG00010000376 ACVR1B (ENSSAUG00010000358) prkag1 (ENSSAUG00010000326) rhebl1 (ENSSAUG00010000301) IKZF4 (ENSSAUG00010019251) rps26 (ENSSAUG00010019250) fkbp11 (ENSSAUG00010019249) arf3b (ENSSAUG00010019248) ENSSAUG00010015226 pa2g4a (ENSSAUG00010015133) crbn (ENSSAUG00010015106) ENSSAUG00010015103 vhl (ENSSAUG00010015100) tatdn2 (ENSSAUG00010015098) ENSSAUG00010015094 ccdc174 (ENSSAUG00010015090) #22 ENSSAUG00010015087 #24 prkcda (ENSSAUG00010014159) RFT1 (ENSSAUG00010014132) mustn1a (ENSSAUG00010014130) ruvbl1 (ENSSAUG00010014127) eefsec (ENSSAUG00010014123) GATA2 (ENSSAUG00010014120) ENSSAUG00010014111 ENSSAUG00010014029 arpc4 (ENSSAUG00010014019) pfkfb4b (ENSSAUG00010013615) MAPKAPK3 (ENSSAUG00010013532) uroc1 (ENSSAUG00010013505) CHCHD4 (ENSSAUG00010013503) #17 sec61a1 (ENSSAUG00010013390) Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00500000044852.b.a ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b ENSGT00940000159521 ENSGT00950000183080.a.a.e.b ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT00530000066343 ENSGT00440000033958 #22 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00390000016233.e.b ENSGT00950000182835.c.d.c.b ENSGT00940000154089.a.d ENSGT00390000015136 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.g.b Large yellow croaker MODERN SPECIES 478 ACVR1B (ENSLCRG00005003442) prkag1 (ENSLCRG00005003703) IKZF4 (ENSLCRG00005004353) rhebl1 (ENSLCRG00005004443) rps26 (ENSLCRG00005004457) fkbp11 (ENSLCRG00005004475) ENSLCRG00005004493 arf3b (ENSLCRG00005004521) ERBB3 (ENSLCRG00005005059) pa2g4a (ENSLCRG00005010477) crbn (ENSLCRG00005010547) ENSLCRG00005010592 vhl (ENSLCRG00005010596) tatdn2 (ENSLCRG00005010602) ghrl (ENSLCRG00005010617) ccdc174 (ENSLCRG00005010649) #22 ENSLCRG00005010669 ENSLCRG00005010720 #24 prkcda (ENSLCRG00005010948) RFT1 (ENSLCRG00005012157) mustn1a (ENSLCRG00005012178) ruvbl1 (ENSLCRG00005012182) ENSLCRG00005012190 ENSLCRG00005012191 eefsec (ENSLCRG00005012197) GATA2 (ENSLCRG00005012244) ENSLCRG00005012275 ENSLCRG00005012303 arpc4 (ENSLCRG00005012328) pfkfb4b (ENSLCRG00005012368) ENSLCRG00005012554 European seabass MODERN SPECIES 10 ENSDLAG00005033182 ENSDLAG00005002236 ENSDLAG00005002779 ENSDLAG00005006036 ENSDLAG00005006049 ENSDLAG00005006078 fkbp11 (ENSDLAG00005006088) arf3b (ENSDLAG00005029991) ENSDLAG00005006351 pa2g4a (ENSDLAG00005011553) crbn (ENSDLAG00005011604) ENSDLAG00005011691 vhl (ENSDLAG00005032290) tatdn2 (ENSDLAG00005011697) ENSDLAG00005011701 ccdc174 (ENSDLAG00005011740) #22 ENSDLAG00005012097 ruvbl1 (ENSDLAG00005012934) eefsec (ENSDLAG00005012973) GATA2 (ENSDLAG00005012981) ENSDLAG00005012995 ENSDLAG00005027505 arpc4 (ENSDLAG00005013042) pfkfb4b (ENSDLAG00005013067) ENSDLAG00005013286 uroc1 (ENSDLAG00005013600) sec61a1 (ENSDLAG00005013810) ip6k2b (ENSDLAG00005013848) ENSDLAG00005031909 ENSDLAG00005033274 inka1a (ENSDLAG00005013873) Tiger tail seahorse MODERN SPECIES 295 rhebl1 (ENSHCOG00000003667) prkag1 (ENSHCOG00000003700) ACVR1B (ENSHCOG00000003728) ENSHCOG00000003749 ENSHCOG00000003760 B4GALNT1 (ENSHCOG00000003835) os9 (ENSHCOG00000003854) ENSHCOG00000003862 ENSHCOG00000003869 pa2g4a (ENSHCOG00000003886) crbn (ENSHCOG00000003921) vhl (ENSHCOG00000003935) ENSHCOG00000003969 ENSHCOG00000003978 tatdn2 (ENSHCOG00000003987) ccdc174 (ENSHCOG00000004005) #22 ENSHCOG00000000108 #24 prkcda (ENSHCOG00000004118) RFT1 (ENSHCOG00000004148) RFT1 (ENSHCOG00000000111) ENSHCOG00000004165 ruvbl1 (ENSHCOG00000004175) ENSHCOG00000004182 eefsec (ENSHCOG00000004193) GATA2 (ENSHCOG00000004205) ENSHCOG00000004225 arpc4 (ENSHCOG00000004231) pfkfb4b (ENSHCOG00000004246) MAPKAPK3 (ENSHCOG00000004272) uroc1 (ENSHCOG00000004286) CHCHD4 (ENSHCOG00000004289) #17 Pinecone sodierfish MODERN SPECIES 19 ANKRD33 (ENSMMDG00005022607) ACVR1B (ENSMMDG00005022595) prkag1 (ENSMMDG00005021417) rhebl1 (ENSMMDG00005021381) IKZF4 (ENSMMDG00005021379) RPS26 (ENSMMDG00005021376) fkbp11 (ENSMMDG00005021374) arf3b (ENSMMDG00005021373) ERBB3 (ENSMMDG00005021353) pa2g4a (ENSMMDG00005021330) crbn (ENSMMDG00005021323) ENSMMDG00005021320 vhl (ENSMMDG00005021319) tatdn2 (ENSMMDG00005021317) ENSMMDG00005021314 ccdc174 (ENSMMDG00005021301) #22 ENSMMDG00005021296 #24 prkcda (ENSMMDG00005021282) RFT1 (ENSMMDG00005021274) ENSMMDG00005021270 ruvbl1 (ENSMMDG00005021263) eefsec (ENSMMDG00005021249) GATA2 (ENSMMDG00005021242) ENSMMDG00005021241 ENSMMDG00005021229 arpc4 (ENSMMDG00005021200) pfkfb4b (ENSMMDG00005015443) MAPKAPK3 (ENSMMDG00005015339) uroc1 (ENSMMDG00005015335) ENSMMDG00005015332 #17 sec61a1 (ENSMMDG00005015300) Cod MODERN SPECIES 4 ENSGMOG00000033868 ENSGMOG00000025363 ENSGMOG00000007558 ENSGMOG00000007564 ENSGMOG00000007568 ccdc65 (ENSGMOG00000007573) ENSGMOG00000007595 ENSGMOG00000004803 ENSGMOG00000007607 ENSGMOG00000024842 crbn (ENSGMOG00000007635) vhl (ENSGMOG00000007647) ENSGMOG00000024854 ENSGMOG00000007654 ENSGMOG00000007658 ccdc174 (ENSGMOG00000007664) #22 ENSGMOG00000007673 #24 ENSGMOG00000007681 ENSGMOG00000007691 ENSGMOG00000030424 ruvbl1 (ENSGMOG00000007699) GATA2 (ENSGMOG00000027399) ENSGMOG00000036390 ENSGMOG00000007712 arpc4 (ENSGMOG00000007717) pfkfb4b (ENSGMOG00000007724) ENSGMOG00000007740 ENSGMOG00000007753 ip6k2b (ENSGMOG00000007756) ENSGMOG00000007761 ENSGMOG00000007762 Protacanthopterygii ANCESTRAL SPECIES 3 ENSGT00940000157032.c.b ENSGT00950000183019.f.b.a ENSGT00940000165909 ENSGT00940000158308.b ENSGT00390000002517.b.i ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521 ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00390000016404 ENSGT01050000244882.b.c.a.b ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000153655.B #23 ENSGT00940000157922.a #24 ENSGT00940000155327.h ENSGT00390000011390 ENSGT00940000153920.a.b.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315.e.a ENSGT00940000165491 ENSGT00940000155864.a.a ENSGT00730000111536 #36 ENSGT00390000016233.f ENSGT00950000182835.c.d.c.a ENSGT00940000154089.a.c ENSGT00940000154791 Salmoninae ANCESTRAL SPECIES 3 ENSGT00940000157032.c.b.b ENSGT00950000183019.f.b.a.a ENSGT00940000165909.d.b ENSGT00390000007809.a.f ENSGT00940000158308.b.a ENSGT00390000002517.b.i ENSGT00390000002517.a.b.a ENSGT00940000159521.n ENSGT00940000156107.e.b.k ENSGT00940000154281.e ENSGT00390000016404.i ENSGT01050000244882.b.c.a.b.c ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000157922.a.a #24 ENSGT00940000155327.h.e ENSGT00940000157363.j.b ENSGT00940000153556.A.k ENSGT00940000158170.c.b ENSGT00940000158170.c.a.a ENSGT00940000156315.e.a.b ENSGT00940000165491.b ENSGT00940000155864.a.a.b ENSGT00730000111536 #36 ENSGT00390000016233.f ENSGT00390000016233.e.b.a ENSGT00950000182835.c.d.c.b.d ENSGT00940000154089.a.d.a ENSGT00940000175089 Huchen MODERN SPECIES 395 ARHGEF25 (ENSHHUG00000047208) ENSHHUG00000047205 ACVR1B (ENSHHUG00000047093) prkag1 (ENSHHUG00000047046) rhebl1 (ENSHHUG00000046992) LMBR1L (ENSHHUG00000046975) IKZF4 (ENSHHUG00000046966) ENSHHUG00000046961 ccdc65 (ENSHHUG00000046954) fkbp11 (ENSHHUG00000046880) ARF3 (ENSHHUG00000046874) ERBB3 (ENSHHUG00000046857) pa2g4a (ENSHHUG00000046688) crbn (ENSHHUG00000046657) ENSHHUG00000046655 ccdc174 (ENSHHUG00000046642) #22 ENSHHUG00000046628 #23 FGD5 (ENSHHUG00000046612) #24 Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000166618.l.b ENSGT00940000160422.b.a ENSGT00500000044852.b.a.f.b ENSGT00940000157032.c.b.a ENSGT00950000183019.f.b.a.b ENSGT00940000165909.d.a ENSGT00940000158308.b.b ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521.m ENSGT00940000165468.g ENSGT00940000156107.e.b.l ENSGT00940000154281.f ENSGT00390000016404.j ENSGT01050000244882.b.c.a.b.d ENSGT00440000033958 #22 ENSGT00940000157922.a.a #24 ENSGT00940000155327.h.e ENSGT00390000011390.j ENSGT00940000157363.j.b ENSGT00940000153556.A.k ENSGT00940000158170.c.a.a ENSGT00940000156315.e.a.b ENSGT00940000165491.b ENSGT00940000155864.a.a.b ENSGT00730000111536 #36 ENSGT00390000016233.f ENSGT00390000016233.e.b.a ENSGT00950000182835.c.d.c.b.d ENSGT00940000154089.a.d.a ENSGT00940000175089 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000166618.l.b ENSGT00940000160422.b.a ENSGT00500000044852.b.a.f.b ENSGT00940000157032.c.b.a ENSGT00950000183019.f.b.a.b ENSGT00940000165909.d.a.a ENSGT00940000158308.b.b ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521.m ENSGT00940000165468.g ENSGT00940000156107.e.b.l ENSGT00940000154281.f ENSGT00390000016404.j ENSGT01050000244882.b.c.a.b.d ENSGT00440000033958.m #22 ENSGT00940000157922.a.b #24 ENSGT00940000155327.h.f ENSGT00390000011390.i ENSGT00940000157363.j.a ENSGT00940000153920.a.b.a ENSGT00940000153556.A.l.a ENSGT00940000158170.d ENSGT00940000156315.e.a.a ENSGT00940000165491.a ENSGT00940000155864.a.a.a ENSGT00390000016233.e.b.b ENSGT00950000182835.c.d.c.b.c ENSGT00730000110895.a ENSGT00940000154089.a.d.b ENSGT00390000015136 Rainbow trout MODERN SPECIES 28 ENSOMYG00000019298 ARHGEF25 (ENSOMYG00000019319) ENSOMYG00000066713 ENSOMYG00000019446 ENSOMYG00000020089 ENSOMYG00000022724 ENSOMYG00000022746 ENSOMYG00000022773 ccdc65 (ENSOMYG00000022830) fkbp11 (ENSOMYG00000022846) ENSOMYG00000073778 ENSOMYG00000023531 pa2g4a (ENSOMYG00000025706) ENSOMYG00000025787 ENSOMYG00000025817 ENSOMYG00000025838 #22 ENSOMYG00000026217 RFT1 (ENSOMYG00000026901) SFMBT1 (ENSOMYG00000027052) mustn1a (ENSOMYG00000027088) ruvbl1 (ENSOMYG00000027119) eefsec (ENSOMYG00000027157) ENSOMYG00000070492 GATA2 (ENSOMYG00000027178) ENSOMYG00000027188 ENSOMYG00000006149 ENSOMYG00000027385 pfkfb4b (ENSOMYG00000027875) ENSOMYG00000053757 ENSOMYG00000029718 uroc1 (ENSOMYG00000030256) Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000166618.l.b ENSGT00940000160422.b.a ENSGT00500000044852.b.a.f.b ENSGT00940000157032.c.b.a ENSGT00950000183019.f.b.a.b ENSGT00940000165909.d.a.a ENSGT00940000158308.b.b ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521.m ENSGT00940000165468.g ENSGT00940000156107.e.b.l ENSGT00940000154281.f ENSGT00390000016404.j ENSGT01050000244882.b.c.a.b.d ENSGT00440000033958.m #22 ENSGT00940000157922.a.b #24 ENSGT00940000155327.h.f ENSGT00390000011390.i ENSGT00940000157363.j.a ENSGT00940000153920.a.b.a ENSGT00940000153556.A.l.a ENSGT00940000158170.d ENSGT00940000156315.e.a.a ENSGT00940000165491.a ENSGT00940000155864.a.a.a ENSGT00390000016233.e.b.b ENSGT00950000182835.c.d.c.b.c ENSGT00730000110895.a ENSGT00940000154089.a.d.b ENSGT00390000015136 Chinook salmon MODERN SPECIES 31 ENSOTSG00005012780 ARHGEF25 (ENSOTSG00005012782) ENSOTSG00005000700 ACVR1B (ENSOTSG00005000781) prkag1 (ENSOTSG00005001759) rhebl1 (ENSOTSG00005003358) IKZF4 (ENSOTSG00005003380) ENSOTSG00005003384 ccdc65 (ENSOTSG00005003388) fkbp11 (ENSOTSG00005003391) ENSOTSG00005003398 ERBB3 (ENSOTSG00005003431) pa2g4a (ENSOTSG00005007569) crbn (ENSOTSG00005007579) ENSOTSG00005007581 ccdc174 (ENSOTSG00005007584) #22 FGD5 (ENSOTSG00005007591) #24 prkcda (ENSOTSG00005007622) RFT1 (ENSOTSG00005009115) SFMBT1 (ENSOTSG00005009117) ENSOTSG00005009119 mustn1a (ENSOTSG00005009120) ruvbl1 (ENSOTSG00005009122) eefsec (ENSOTSG00005009123) GATA2 (ENSOTSG00005009125) ENSOTSG00005009126 ENSOTSG00005009128 arpc4 (ENSOTSG00005009156) pfkfb4b (ENSOTSG00005009160) ENSOTSG00005009187 ENSOTSG00005009188 Coho salmon MODERN SPECIES 25 os9 (ENSOKIG00005006874) B4GALNT1 (ENSOKIG00005006895) ENSOKIG00005006930 ARHGEF25 (ENSOKIG00005006964) ACVR1B (ENSOKIG00005007035) PRKAG1 (ENSOKIG00005007423) rhebl1 (ENSOKIG00005007502) IKZF4 (ENSOKIG00005007537) ccdc65 (ENSOKIG00005007545) fkbp11 (ENSOKIG00005007556) ENSOKIG00005007572 ERBB3 (ENSOKIG00005007688) pa2g4a (ENSOKIG00005009354) CRBN (ENSOKIG00005009570) ENSOKIG00005009616 ccdc174 (ENSOKIG00005009622) #22 FGD5 (ENSOKIG00005009651) #24 prkcda (ENSOKIG00005009824) RFT1 (ENSOKIG00005010914) SFMBT1 (ENSOKIG00005011070) mustn1a (ENSOKIG00005011144) ruvbl1 (ENSOKIG00005011157) eefsec (ENSOKIG00005011195) ENSOKIG00005011202 ENSOKIG00005011232 GATA2 (ENSOKIG00005011235) ENSOKIG00005011242 ENSOKIG00005011249 ARPC4 (ENSOKIG00005011327) pfkfb4b (ENSOKIG00005011455) ENSOKIG00005011661 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00500000044852.b.a.e ENSGT00940000157032.c.b.b ENSGT00950000183019.f.b.a.a ENSGT00940000165909.d.b ENSGT00390000007809.a.f ENSGT00940000158308.b.a ENSGT00390000002517.a.b.a ENSGT00940000159521.n ENSGT00940000156107.e.b.k ENSGT00940000154281.e ENSGT00390000016404.i ENSGT01050000244882.b.c.a.b.c ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958.n #22 ENSGT00940000157922.a.a #24 ENSGT00940000155327.h.e ENSGT00940000157363.j.b ENSGT00940000153556.A.k ENSGT00940000158170.c.a.a ENSGT00940000156315.e.a.b ENSGT00940000165491.b ENSGT00940000155864.a.a.b ENSGT00730000111536 #36 ENSGT00390000016233.e.b.a ENSGT00950000182835.c.d.c.b.d ENSGT00940000154089.a.d.a ENSGT00940000175089 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.h.b Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00500000044852.b.a.e ENSGT00940000157032.c.b.b ENSGT00950000183019.f.b.a.a ENSGT00940000165909.d.b ENSGT00390000007809.a.f ENSGT00940000158308.b.a ENSGT00390000002517.a.b.a ENSGT00940000159521.n ENSGT00940000156107.e.b.k ENSGT00940000154281.e ENSGT00390000016404.i ENSGT01050000244882.b.c.a.b.c ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958.n #22 ENSGT00940000157922.a.a #24 ENSGT00940000155327.h.e ENSGT00940000157363.j.b ENSGT00940000153556.A.k ENSGT00940000158170.c.a.a ENSGT00940000156315.e.a.b ENSGT00940000165491.b ENSGT00940000155864.a.a.b ENSGT00730000111536 #36 ENSGT00390000016233.e.b.a ENSGT00950000182835.c.d.c.b.d ENSGT00940000154089.a.d.a ENSGT00940000175089 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.h.b Chinook salmon MODERN SPECIES 11 ANKRD33 (ENSOTSG00005033436) ACVR1B (ENSOTSG00005033100) prkag1 (ENSOTSG00005030092) rhebl1 (ENSOTSG00005030066) LMBR1L (ENSOTSG00005030013) IKZF4 (ENSOTSG00005030009) ENSOTSG00005030005 fkbp11 (ENSOTSG00005030003) ERBB3 (ENSOTSG00005029394) pa2g4a (ENSOTSG00005029331) crbn (ENSOTSG00005029309) ENSOTSG00005029305 vhl (ENSOTSG00005029302) tatdn2 (ENSOTSG00005029297) ghrl (ENSOTSG00005029294) ccdc174 (ENSOTSG00005029273) #22 FGD5 (ENSOTSG00005029262) #24 prkcda (ENSOTSG00005027695) SFMBT1 (ENSOTSG00005027688) ruvbl1 (ENSOTSG00005027667) ENSOTSG00005027662 GATA2 (ENSOTSG00005027661) ENSOTSG00005027660 ENSOTSG00005027640 h1-10 (ENSOTSG00005027581) #36 ENSOTSG00005027572 arpc4 (ENSOTSG00005027526) pfkfb4b (ENSOTSG00005027481) MAPKAPK3 (ENSOTSG00005025907) ENSOTSG00005025899 ENSOTSG00005025895 #17 Salmo ANCESTRAL SPECIES 6 ENSGT00390000006679.a.e.k ENSGT00940000166618.l.b ENSGT00940000154766.a.b ENSGT00500000044852.b.a.f.a.a ENSGT00940000157032.c.b.a ENSGT00950000183019.f.b.a.b ENSGT00940000165909.d.a ENSGT00940000158308.b.b ENSGT00390000002517.a.a ENSGT00940000153804.B ENSGT00940000159521.m ENSGT00940000156107.e.b.l ENSGT00940000154281.f ENSGT00390000016404.j ENSGT01050000244882.b.c.a.b.d ENSGT00440000033958 #22 ENSGT00940000157922.a.a #24 ENSGT00940000155327.h.e ENSGT00390000011390.j ENSGT00940000157363.j.b ENSGT00940000153556.A.k ENSGT00940000156315.e.a.b ENSGT00940000165491.b ENSGT00940000155864.a.a.b ENSGT00730000111536 #36 ENSGT00390000016233.e.b.a ENSGT00950000182835.c.d.c.b.d ENSGT00940000154089.a.d.a ENSGT00940000175089 ENSGT00390000013132.b.b #17 ENSGT00390000003721.d.a.h.b River trout MODERN SPECIES 7 B4GALNT1 (ENSSTUG00000007210) ENSSTUG00000007206 ARHGEF25 (ENSSTUG00000007160) ANKRD33 (ENSSTUG00000007148) ACVR1B (ENSSTUG00000006684) prkag1 (ENSSTUG00000006076) rhebl1 (ENSSTUG00000006037) IKZF4 (ENSSTUG00000006031) ENSSTUG00000006021 ccdc65 (ENSSTUG00000006013) fkbp11 (ENSSTUG00000005981) ERBB3 (ENSSTUG00000003773) pa2g4a (ENSSTUG00000003649) crbn (ENSSTUG00000003595) ENSSTUG00000003587 ccdc174 (ENSSTUG00000003528) #22 ENSSTUG00000003522 #23 FGD5 (ENSSTUG00000003497) #24 prkcda (ENSSTUG00000002467) RFT1 (ENSSTUG00000002405) SFMBT1 (ENSSTUG00000002068) mustn1a (ENSSTUG00000001861) ruvbl1 (ENSSTUG00000027661) eefsec (ENSSTUG00000027652) GATA2 (ENSSTUG00000027643) ENSSTUG00000027631 ENSSTUG00000027590 ENSSTUG00000027467 pfkfb4b (ENSSTUG00000025941) ENSSTUG00000025864 uroc1 (ENSSTUG00000024351) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000063745 ENSSSAG00000055564 rheb (ENSSSAG00000055476) ENSSSAG00000054229 ENSSSAG00000082995 ENSSSAG00000054190 ENSSSAG00000117700 fkbp11 (ENSSSAG00000054176) ERBB3 (ENSSSAG00000046239) pa2g4a (ENSSSAG00000046054) crbn (ENSSSAG00000067708) ENSSSAG00000102332 vhl (ENSSSAG00000045872) tatdn2 (ENSSSAG00000045848) ghrl (ENSSSAG00000045825) ccdc174 (ENSSSAG00000045776) #22 ENSSSAG00000045758 #24 ENSSSAG00000045276 ENSSSAG00000118088 ENSSSAG00000043566 ruvb1 (ENSSSAG00000043520) ENSSSAG00000087179 ENSSSAG00000043509 ENSSSAG00000102313 ENSSSAG00000083130 ENSSSAG00000043372 h1-10 (ENSSSAG00000085724) #36 arpc4 (ENSSSAG00000043159) ENSSSAG00000041790 ENSSSAG00000039837 efcab12 (ENSSSAG00000039724) Northern pike MODERN SPECIES 16 ENSELUG00000001162 ENSELUG00000015927 ACVR1B (ENSELUG00000015961) prkag1 (ENSELUG00000016000) rhebl1 (ENSELUG00000016028) LMBR1L (ENSELUG00000016107) IKZF4 (ENSELUG00000016122) ccdc65 (ENSELUG00000016185) fkbp11 (ENSELUG00000016161) ERBB3 (ENSELUG00000016292) pa2g4a (ENSELUG00000016357) crbn (ENSELUG00000016386) ENSELUG00000016400 vhl (ENSELUG00000016421) tatdn2 (ENSELUG00000016441) ccdc174 (ENSELUG00000016454) #22 FGD5 (ENSELUG00000016482) #24 prkcda (ENSELUG00000006789) RFT1 (ENSELUG00000016553) mustn1a (ENSELUG00000016577) ruvbl1 (ENSELUG00000016608) eefsec (ENSELUG00000016632) GATA2 (ENSELUG00000016644) ENSELUG00000016660 ENSELUG00000016682 h1-10 (ENSELUG00000016694) #36 arpc4 (ENSELUG00000016753) pfkfb4b (ENSELUG00000016845) ENSELUG00000033243 ENSELUG00000016883 uroc1 (ENSELUG00000016979) Otomorpha ANCESTRAL SPECIES 580 ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 Clupeiformes ANCESTRAL SPECIES 528 ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000153556.A ENSGT00940000158170 Atlantic herring MODERN SPECIES 21 ENSCHAG00000023727 NAA80 (ENSCHAG00000023723) TMBIM6 (ENSCHAG00000023701) avil (ENSCHAG00000022086) ctdsp2 (ENSCHAG00000022008) ENSCHAG00000021983 slc11a2 (ENSCHAG00000018951) EEF1AKMT3 (ENSCHAG00000018834) traip (ENSCHAG00000018810) h1-10 (ENSCHAG00000018802) #36 arpc4 (ENSCHAG00000018740) crbn (ENSCHAG00000018725) vhl (ENSCHAG00000018721) tatdn2 (ENSCHAG00000018712) ghrl (ENSCHAG00000018421) ccdc174 (ENSCHAG00000018149) #22 os9 (ENSCHAG00000018113) ENSCHAG00000018109 ENSCHAG00000018037 ENSCHAG00000018008 krt18b (ENSCHAG00000017985) ENSCHAG00000017777 pfdn5 (ENSCHAG00000017753) ENSCHAG00000009968 mettl7a.3 (ENSCHAG00000009760) ENSCHAG00000009737 scn8ab (ENSCHAG00000005584) SMARCC2 (ENSCHAG00000005127) tsfm (ENSCHAG00000005096) endou (ENSCHAG00000004975) stat2 (ENSCHAG00000004694) Denticle herring MODERN SPECIES 11 ENSDCDG00000001256 rdh5 (ENSDCDG00000001260) bloc1s1 (ENSDCDG00000001264) nab2 (ENSDCDG00000001269) cnpy2 (ENSDCDG00000001274) ENSDCDG00000001279 ENSDCDG00000001282 ENSDCDG00000001289 ahcy (ENSDCDG00000001295) pck1 (ENSDCDG00000001300) mustn1a (ENSDCDG00000001302) RFT1 (ENSDCDG00000001308) prkcda (ENSDCDG00000001344) crbn (ENSDCDG00000001475) ENSDCDG00000001481 ccdc174 (ENSDCDG00000001488) #22 ENSDCDG00000001497 ruvbl1 (ENSDCDG00000001518) eefsec (ENSDCDG00000001522) cela1.3 (ENSDCDG00000001524) ENSDCDG00000001534 smarcd1 (ENSDCDG00000001557) gpd1b (ENSDCDG00000001568) cers5 (ENSDCDG00000001592) ENSDCDG00000001615 BCDIN3D (ENSDCDG00000001620) ENSDCDG00000001624 ENSDCDG00000001628 traip (ENSDCDG00000001640) arpc4 (ENSDCDG00000001652) h1-10 (ENSDCDG00000001656) #36 Otophysi ANCESTRAL SPECIES 6 ENSGT00940000153189.C ENSGT00940000163827.a.a.a.a ENSGT00940000159495 ENSGT00390000012980.b ENSGT00510000048041 ENSGT00390000002376 ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a ENSGT00940000155327.h ENSGT00940000157922.a #24 ENSGT00940000156246.d ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000165984 ENSGT00940000157422 ENSGT00940000154857.yb.a ENSGT00940000177126 ENSGT01030000234518.A.b ENSGT00940000156310.o ENSGT00390000003721.d.a.g.b.e ENSGT00390000013132.a #17 ENSGT00390000015136 ENSGT00730000110895.a ENSGT00950000182835.c.d.c.b ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00530000063825.B ENSGT00390000016293 Characiphysae ANCESTRAL SPECIES 2 ENSGT00940000153189.C ENSGT00940000163827.a.a.a.a ENSGT00940000159495 ENSGT00390000012980.b ENSGT00510000048041 ENSGT00390000002376 ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a ENSGT00940000155327.h.a ENSGT00940000157922.a #24 ENSGT00940000156246.d ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000165984 ENSGT00940000157422 ENSGT00940000154857.yb.a ENSGT00940000177126 ENSGT01030000234518.A.b ENSGT00940000156310.o ENSGT00390000003721.d.a.g.b.e ENSGT00390000015136 ENSGT00730000110895.a ENSGT00950000182835.c.d.c.b ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00530000063825.B ENSGT00390000016293 ENSGT01030000234570.d.b.a.a Characiphysae_b ANCESTRAL SPECIES ENSGT00940000153189.C ENSGT00940000163827.a.a.a.a ENSGT00940000159495 ENSGT00390000012980.b ENSGT00510000048041 ENSGT00390000002376 ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a ENSGT00940000155327.h.a ENSGT00940000157922.a #24 ENSGT00940000156246.d ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000165984 ENSGT00940000157422 ENSGT00940000154857.yb.a ENSGT00940000177126 ENSGT00390000003721.d.a.g.b.e ENSGT00390000015136 ENSGT00950000182835.c.d.c.b ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00530000063825.B ENSGT00390000016293 ENSGT01030000234570.d.b.a.a ENSGT00940000155746 ENSGT00940000155969.y.b.c ENSGT00940000155440.c.a Characoidei ANCESTRAL SPECIES ENSGT00950000182805.a.a.a.a.a ENSGT00940000153189.C ENSGT00940000163827.a.a.a.a ENSGT00940000159495 ENSGT00390000012980.b ENSGT00510000048041 ENSGT00390000002376 ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a ENSGT00940000155327.h.a ENSGT00940000157922.a #24 ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000165984 ENSGT00940000157422 ENSGT00940000154857.yb.a ENSGT00940000154368.t ENSGT00390000003721.d.a.g.b.e ENSGT00390000015136 ENSGT00950000182835.c.d.c.b ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00530000063825.B ENSGT00390000016293 ENSGT01030000234570.d.b.a.a ENSGT00940000155746 ENSGT00940000155969.y.b.c ENSGT00940000155440.c.a Red-bellied piranha MODERN SPECIES 9 ppil1 (ENSPNAG00000016059) slc6a11a (ENSPNAG00000016044) FRS3 (ENSPNAG00000016035) tspo (ENSPNAG00000016027) uqcc2 (ENSPNAG00000016018) ENSPNAG00000015997 tomm6 (ENSPNAG00000015961) ddi2 (ENSPNAG00000015930) prkcda (ENSPNAG00000015889) ENSPNAG00000015820 #24 ENSPNAG00000015767 crbn (ENSPNAG00000015753) vhl (ENSPNAG00000015696) tatdn2 (ENSPNAG00000015683) ghrl (ENSPNAG00000015674) ccdc174 (ENSPNAG00000015652) #22 ENSPNAG00000015612 SLC4A8 (ENSPNAG00000015593) ttll3 (ENSPNAG00000015497) ENSPNAG00000015471 ENSPNAG00000015111 ENSPNAG00000005579 sec61a1 (ENSPNAG00000015082) uroc1 (ENSPNAG00000015069) ENSPNAG00000015000 ENSPNAG00000014987 pfkfb4b (ENSPNAG00000014977) ITPR1 (ENSPNAG00000014927) ENSPNAG00000014809 sumf1 (ENSPNAG00000014795) endou (ENSPNAG00000014759) Mexicana tetra MODERN SPECIES 4 slc6a11a (ENSAMXG00000036873) FRS3 (ENSAMXG00000002211) tspo (ENSAMXG00000002209) uqcc2 (ENSAMXG00000002206) tomm6 (ENSAMXG00000039468) ENSAMXG00000002200 ddi2 (ENSAMXG00000002195) prkcda (ENSAMXG00000002191) ENSAMXG00000036778 ENSAMXG00000041356 #24 ENSAMXG00000034174 crbn (ENSAMXG00000002182) vhl (ENSAMXG00000002179) tatdn2 (ENSAMXG00000039000) ghrl (ENSAMXG00000002173) ccdc174 (ENSAMXG00000002171) #22 ENSAMXG00000002167 SLC4A8 (ENSAMXG00000002165) ENSAMXG00000032629 ENSAMXG00000002013 ENSAMXG00000001949 ENSAMXG00000041399 sec61a1 (ENSAMXG00000001920) uroc1 (ENSAMXG00000001906) pfkfb4b (ENSAMXG00000001899) ITPR1 (ENSAMXG00000001795) sumf1 (ENSAMXG00000037078) endou (ENSAMXG00000030730) tsfm (ENSAMXG00000001713) myl6 (ENSAMXG00000001694) SMARCC2 (ENSAMXG00000001656) Electric eel MODERN SPECIES 113 ENSEEEG00000009682 eno1b (ENSEEEG00000009759) ppil1 (ENSEEEG00000009805) FRS3 (ENSEEEG00000009807) tspo (ENSEEEG00000009808) uqcc2 (ENSEEEG00000009809) tomm6 (ENSEEEG00000009810) ENSEEEG00000009811 prkcda (ENSEEEG00000009815) ENSEEEG00000009821 #24 zgc:152986 (ENSEEEG00000009824) crbn (ENSEEEG00000009825) vhl (ENSEEEG00000009827) tatdn2 (ENSEEEG00000009830) ghrl (ENSEEEG00000009831) ccdc174 (ENSEEEG00000009842) #22 ENSEEEG00000009843 SLC4A8 (ENSEEEG00000009845) ttll3 (ENSEEEG00000009848) ENSEEEG00000009849 ENSEEEG00000009853 ENSEEEG00000009858 sec61a1 (ENSEEEG00000009886) uroc1 (ENSEEEG00000010375) pfkfb4b (ENSEEEG00000010398) ENSEEEG00000010488 sumf1 (ENSEEEG00000010490) endou (ENSEEEG00000010494) tsfm (ENSEEEG00000010502) myl6 (ENSEEEG00000010511) SMARCC2 (ENSEEEG00000010625) Channel catfish MODERN SPECIES 2 negr1 (ENSIPUG00000022594) ENSIPUG00000022605 chd1l (ENSIPUG00000022617) SFT2D2 (ENSIPUG00000022648) tmem45a (ENSIPUG00000022656) ENSIPUG00000022661 opa1 (ENSIPUG00000022672) hes1 (ENSIPUG00000022742) ENSIPUG00000022747 dmbx1b (ENSIPUG00000022749) ENSIPUG00000022754 ENSIPUG00000022772 crbn (ENSIPUG00000022774) vhl (ENSIPUG00000022798) ghrl (ENSIPUG00000022801) ccdc174 (ENSIPUG00000022811) #22 ENSIPUG00000022821 SLC4A8 (ENSIPUG00000022836) ttll3 (ENSIPUG00000022873) ENSIPUG00000022881 ENSIPUG00000022890 ip6k2b (ENSIPUG00000022900) ghrl (ENSIPUG00000022902) tatdn2 (ENSIPUG00000022911) sec61a1 (ENSIPUG00000022923) uroc1 (ENSIPUG00000022941) ENSIPUG00000022960 klhl41b (ENSIPUG00000022994) ppig (ENSIPUG00000003440) ENSIPUG00000003452 ENSIPUG00000003457 Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00940000153189.C ENSGT00940000163827.a.a.a.a ENSGT00940000159495 ENSGT00390000012980.b ENSGT00510000048041 ENSGT00390000002376 ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a ENSGT00940000155327.h.d ENSGT00940000157922.a #24 ENSGT00940000156246.d ENSGT00390000016404 ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00440000033958 #22 ENSGT00940000165984 ENSGT00940000157422 ENSGT00940000154857.yb.a ENSGT00940000154368.t ENSGT00940000156310.o ENSGT00390000003721.d.a.g.b.e.a ENSGT00390000013132.a #17 ENSGT00390000015136 ENSGT00730000110895.a ENSGT00950000182835.c.d.c.b ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00530000063825.B ENSGT00390000016293 ENSGT01030000234570.d.b.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 203 ENSGT00940000153189.C.nb ENSGT00940000163827.a.a.a.a.a ENSGT00940000159495.h ENSGT00390000012980.b.b ENSGT00510000048041.y ENSGT00390000002376.u.a ENSGT00950000182999.a.g.a ENSGT00950000182999.a.h ENSGT00940000155327.h.d.b ENSGT00940000157922.a.d #24 ENSGT00940000156246.d.a ENSGT00390000016404.n ENSGT00390000014353.bb.a ENSGT00940000155616.n ENSGT01010000222866.c ENSGT00440000033958.o #22 ENSGT00940000165984 ENSGT00940000157422.v ENSGT00940000154857.yb.a.f ENSGT00940000154368.t ENSGT00940000166602.A ENSGT00940000157802.t.b ENSGT00390000003721.d.a.g.b.e.a.b ENSGT00390000013132.a #17 ENSGT00390000015136 ENSGT00730000110895.a ENSGT00950000182835.c.d.c.b.e ENSGT00940000155071.D.b ENSGT00390000008983.a.e ENSGT00530000063825.B.b ENSGT00390000016293.a Goldfish MODERN SPECIES 46 eno1b (ENSCARG00000007262) ppil1 (ENSCARG00000007236) slc6a11a (ENSCARG00000055408) FRS3 (ENSCARG00000055382) tspo (ENSCARG00000055345) uqcc2 (ENSCARG00000055325) tomm6 (ENSCARG00000055308) ddi2 (ENSCARG00000055197) prkcda (ENSCARG00000054250) ENSCARG00000054157 #24 zgc:152986 (ENSCARG00000054139) crbn (ENSCARG00000054106) vhl (ENSCARG00000054091) tatdn2 (ENSCARG00000054071) ghrl (ENSCARG00000054031) ccdc174 (ENSCARG00000053957) #22 ENSCARG00000053928 SLC4A8 (ENSCARG00000045979) ttll3 (ENSCARG00000045447) ENSCARG00000045040 ENSCARG00000045007 sec61a1 (ENSCARG00000044785) chchd4b (ENSCARG00000044754) #17 uroc1 (ENSCARG00000043477) pfkfb4b (ENSCARG00000041740) ENSCARG00000041124 sumf1 (ENSCARG00000040919) endou (ENSCARG00000040886) tsfm (ENSCARG00000040868) myl6 (ENSCARG00000040688) ENSCARG00000040246 Cyprininae_a ANCESTRAL SPECIES 203 ENSGT00940000163827.a.a.a.a.a ENSGT00940000159495.h ENSGT00390000012980.b.b ENSGT00390000002376.u.a ENSGT00950000182999.a.g.a ENSGT00510000048041.y ENSGT00960000188185 ENSGT00950000182999.a.h ENSGT00940000155327.h.d.b ENSGT00940000157922.a.d #24 ENSGT00940000156246.d.a ENSGT00390000016404.n ENSGT00390000014353.bb.a ENSGT00940000155616.n ENSGT01010000222866.c ENSGT00440000033958.o #22 ENSGT00940000165984 ENSGT00940000157422.v ENSGT00940000154857.yb.a.f ENSGT00940000164736 ENSGT00940000157802.t.b ENSGT00390000003721.d.a.g.b.e.a.b ENSGT00390000013132.a #17 ENSGT00390000015136 ENSGT00730000110895.a ENSGT00950000182835.c.d.c.b.e ENSGT00940000155071.D.b ENSGT00390000008983.a.e ENSGT00530000063825.B.b ENSGT00390000016293.a ENSGT01030000234570.d.b.a.a.s.b Common carp reference MODERN SPECIES 10 ppil1 (ENSCCRG00000080341) slc6a11a (ENSCCRG00000044987) ENSCCRG00000059392 uqcc2 (ENSCCRG00000052099) tspo (ENSCCRG00000057456) tomm6 (ENSCCRG00000056232) ddi2 (ENSCCRG00000064376) ENSCCRG00000052094 prkcda (ENSCCRG00000052048) ENSCCRG00000036330 #24 zgc:152986 (ENSCCRG00000081106) crbn (ENSCCRG00000052033) vhl (ENSCCRG00000052030) tatdn2 (ENSCCRG00000072698) ghrl (ENSCCRG00000052022) ccdc174 (ENSCCRG00000052019) #22 ENSCCRG00000034121 ENSCCRG00000034490 ttll3 (ENSCCRG00000034138) ENSCCRG00000067199 ENSCCRG00000054660 ENSCCRG00000012203 sec61a1 (ENSCCRG00000033381) chchd4b (ENSCCRG00000033379) #17 uroc1 (ENSCCRG00000033373) ENSCCRG00000056074 pfkfb4b (ENSCCRG00000032689) ENSCCRG00000023305 sumf1 (ENSCCRG00000043975) endou (ENSCCRG00000043997) myl6 (ENSCCRG00000044031) Golden-line barbel MODERN SPECIES 66 ENSSGRG00000050984 zgc:152986 (ENSSGRG00000050987) crbn (ENSSGRG00000050988) tatdn2 (ENSSGRG00000050993) ghrl (ENSSGRG00000050997) ccdc174 (ENSSGRG00000051003) #22 SLC4A8 (ENSSGRG00000051017) ttll3 (ENSSGRG00000051596) ENSSGRG00000051599 ENSSGRG00000051607 ENSSGRG00000051610 uroc1 (ENSSGRG00000051612) pfkfb4b (ENSSGRG00000051655) ENSSGRG00000051674 sumf1 (ENSSGRG00000051735) endou (ENSSGRG00000051748) tsfm (ENSSGRG00000051749) myl6 (ENSSGRG00000051750) SMARCC2 (ENSSGRG00000051771) C1QL4 (ENSSGRG00000052609) pfkmb (ENSSGRG00000052619) Cyprininae ANCESTRAL SPECIES 167 ENSGT00940000153189.C.ob ENSGT00940000163827.a.a.a.a.b ENSGT00940000159495.g ENSGT00390000012980.b.a ENSGT00510000048041.z ENSGT00390000002376.u.b ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a.g.b ENSGT00940000155327.h.d.a ENSGT00940000157922.a.c #24 ENSGT00940000156246.d.b ENSGT00390000016404.m ENSGT00390000014353.bb.b ENSGT00940000155616.m ENSGT01010000222866.d ENSGT00440000033958.p #22 ENSGT00940000157422.u ENSGT00940000154857.yb.a.e ENSGT00940000177126 ENSGT01030000234518.A.b ENSGT00940000157802.t.a ENSGT00390000003721.d.a.g.b.e.a.a ENSGT00950000182835.c.d.c.b.f ENSGT00940000155071.D.a ENSGT00390000008983.a.f ENSGT00530000063825.B.a ENSGT00390000016293.b ENSGT01030000234570.d.b.a.a.s.a ENSGT00940000155746.c ENSGT00940000155969.y.b.c.b ENSGT00940000155440.c.a.c Cyprininae_a ANCESTRAL SPECIES 10 ENSGT00950000182805.a.a.a.a.a.d ENSGT00940000153189.C.ob ENSGT00940000163827.a.a.a.a.b ENSGT00940000159495.g ENSGT00390000012980.b.a ENSGT00390000002376.u.b ENSGT01030000234571.b.b.b.b ENSGT00950000182999.a.g.b ENSGT00940000155327.h.d.a ENSGT00940000157922.a.c #24 ENSGT00940000156246.d.b ENSGT00390000016404.m ENSGT00390000014353.bb.b ENSGT00940000155616.m ENSGT01010000222866.d ENSGT00440000033958.p #22 ENSGT00940000157422.u ENSGT00940000154857.yb.a.e ENSGT00940000177126 ENSGT01030000234518.A.b ENSGT00940000157802.t.a ENSGT00390000003721.d.a.g.b.e.a.a ENSGT00950000182835.c.d.c.b.f ENSGT00940000155071.D.a ENSGT00390000008983.a.f ENSGT00530000063825.B.a ENSGT00390000016293.b ENSGT01030000234570.d.b.a.a.s.a ENSGT00940000155746.c ENSGT00940000155969.y.b.c.b ENSGT00940000155440.c.a.c Golden-line barbel MODERN SPECIES 46 phf10 (ENSSGRG00000016499) phf10 (ENSSGRG00000016504) ENSSGRG00000016506 actr2b (ENSSGRG00000016509) spred2b (ENSSGRG00000016683) meis1b (ENSSGRG00000016686) c1d (ENSSGRG00000016804) SLC29A3 (ENSSGRG00000016805) tomm6 (ENSSGRG00000016807) prkcda (ENSSGRG00000016832) ENSSGRG00000018551 crbn (ENSSGRG00000018552) vhl (ENSSGRG00000018554) tatdn2 (ENSSGRG00000018556) ghrl (ENSSGRG00000018557) ccdc174 (ENSSGRG00000018562) #22 SLC4A8 (ENSSGRG00000018671) ttll3 (ENSSGRG00000020372) ENSSGRG00000020376 ENSSGRG00000020377 ENSSGRG00000020378 ENSSGRG00000020379 pfkfb4b (ENSSGRG00000020409) ITPR1 (ENSSGRG00000023722) sumf1 (ENSSGRG00000024087) endou (ENSSGRG00000024089) tsfm (ENSSGRG00000024091) myl6 (ENSSGRG00000024092) SMARCC2 (ENSSGRG00000024098) pfkmb (ENSSGRG00000024681) ENSSGRG00000025402 Goldfish MODERN SPECIES 24 ENSCARG00000056260 ppil1 (ENSCARG00000056215) slc6a11a (ENSCARG00000056163) FRS3 (ENSCARG00000056150) tspo (ENSCARG00000056118) uqcc2 (ENSCARG00000056093) tomm6 (ENSCARG00000056070) ENSCARG00000056032 ddi2 (ENSCARG00000055945) prkcda (ENSCARG00000055638) ENSCARG00000055566 #24 crbn (ENSCARG00000055520) vhl (ENSCARG00000055490) tatdn2 (ENSCARG00000055478) ghrl (ENSCARG00000055447) ccdc174 (ENSCARG00000055389) #22 SLC4A8 (ENSCARG00000045364) ttll3 (ENSCARG00000044809) ENSCARG00000044802 ENSCARG00000044552 ENSCARG00000044530 ENSCARG00000044516 sec61a1 (ENSCARG00000044440) pfkfb4b (ENSCARG00000040176) ITPR1 (ENSCARG00000039089) endou (ENSCARG00000038968) tsfm (ENSCARG00000038935) myl6 (ENSCARG00000038894) SMARCC2 (ENSCARG00000038538) C1QL4 (ENSCARG00000038495) pfkmb (ENSCARG00000030637) Zebrafish MODERN SPECIES 21 ppil1 (ENSDARG00000015422) slc6a11a (ENSDARG00000074002) FRS3 (ENSDARG00000078688) tspo (ENSDARG00000026655) uqcc2 (ENSDARG00000011272) tomm6 (ENSDARG00000097797) ENSDARG00000079467 ddi2 (ENSDARG00000006477) prkcda (ENSDARG00000009208) ENSDARG00000089622 #24 zgc:152986 (ENSDARG00000070611) crbn (ENSDARG00000054250) vhl (ENSDARG00000070617) tatdn2 (ENSDARG00000070618) ghrl (ENSDARG00000054239) ccdc174 (ENSDARG00000023858) #22 ENSDARG00000097193 SLC4A8 (ENSDARG00000015531) ttll3 (ENSDARG00000053728) ENSDARG00000021720 ip6k2b (ENSDARG00000019613) sec61a1 (ENSDARG00000021669) chchd4b (ENSDARG00000040707) #17 uroc1 (ENSDARG00000070394) ENSDARG00000096949 ENSDARG00000090628 pfkfb4b (ENSDARG00000029075) ITPR1 (ENSDARG00000014655) sumf1 (ENSDARG00000044203) endou (ENSDARG00000044204) tsfm (ENSDARG00000060748) Osteoglossiformes ANCESTRAL SPECIES 54 ENSGT00530000063849.A.b.a ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.c ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d.a ENSGT00390000016404.h ENSGT00390000009678 ENSGT00390000014353 ENSGT00440000033958 #22 ENSGT00940000157922.b #24 ENSGT00940000155327.g ENSGT00390000011390 Asian bonytongue MODERN SPECIES 14 slc38a3a (ENSSFOG00015019721) gnai2a (ENSSFOG00015019793) INKA1 (ENSSFOG00015019838) traip (ENSSFOG00015019883) mon1a (ENSSFOG00015019990) MST1R (ENSSFOG00015020011) camkvb (ENSSFOG00015029096) SEMA3F (ENSSFOG00015020063) arl8bb (ENSSFOG00015025882) BHLHE40 (ENSSFOG00015020159) ITPR1 (ENSSFOG00015020288) setmar (ENSSFOG00015033243) lrrn1 (ENSSFOG00015031033) trnt1 (ENSSFOG00015020844) vhl (ENSSFOG00015032564) ccdc174 (ENSSFOG00015020871) #22 ENSSFOG00015020883 #24 PRKCD (ENSSFOG00015020920) RFT1 (ENSSFOG00015020939) SFMBT1 (ENSSFOG00015020972) MUSTN1 (ENSSFOG00015026222) itih3a.1 (ENSSFOG00015021085) eefsec (ENSSFOG00015028518) gata2a (ENSSFOG00015021149) rpn1 (ENSSFOG00015021160) RAB7A (ENSSFOG00015032975) h1-10 (ENSSFOG00015021194) #36 P. kingsleyae MODERN SPECIES 73 gnai2a (ENSPKIG00000019398) ENSPKIG00000019423 traip (ENSPKIG00000019437) mon1a (ENSPKIG00000019496) ENSPKIG00000019529 camkvb (ENSPKIG00000019579) SEMA3F (ENSPKIG00000019667) arl8bb (ENSPKIG00000019809) BHLHE40 (ENSPKIG00000019834) ITPR1 (ENSPKIG00000019872) ENSPKIG00000019955 setmar (ENSPKIG00000019979) lrrn1 (ENSPKIG00000019990) crbn (ENSPKIG00000019998) trnt1 (ENSPKIG00000020015) ccdc174 (ENSPKIG00000020044) #22 ENSPKIG00000020076 #24 PRKCD (ENSPKIG00000020123) RFT1 (ENSPKIG00000020189) SFMBT1 (ENSPKIG00000020251) Spotted gar MODERN SPECIES 671 gnat1 (ENSLOCG00000010938) edem1 (ENSLOCG00000010944) arl8bb (ENSLOCG00000010957) bhlhe40 (ENSLOCG00000010962) ITPR1 (ENSLOCG00000010973) sumf1 (ENSLOCG00000011045) setmar (ENSLOCG00000011063) lrrn1 (ENSLOCG00000018250) ENSLOCG00000011067 ENSLOCG00000011076 crbn (ENSLOCG00000011083) ENSLOCG00000011096 trnt1 (ENSLOCG00000011105) vhl (ENSLOCG00000011111) tatdn2 (ENSLOCG00000011120) ccdc174 (ENSLOCG00000011131) #22 FGD5 (ENSLOCG00000011142) #24 nr2c2 (ENSLOCG00000011160) #25 mrps25 (ENSLOCG00000011170) #26 RBSN (ENSLOCG00000011180) #27 ENSLOCG00000011194 #28 ENSLOCG00000011200 ENSLOCG00000011216 TLL2 (ENSLOCG00000011225) tm9sf3 (ENSLOCG00000011244) ENSLOCG00000011257 dnajc12 (ENSLOCG00000011266) SIRT1 (ENSLOCG00000011271) cox5b2 (ENSLOCG00000011288) HERC4 (ENSLOCG00000011296) MYPN (ENSLOCG00000011326) Reedfish MODERN SPECIES 9 bhlhe40 (ENSECRG00000018114) arl8bb (ENSECRG00000018149) edem1 (ENSECRG00000018184) GRM7 (ENSECRG00000018263) ENSECRG00000018374 lmcd1 (ENSECRG00000018390) abhd6b (ENSECRG00000018412) DNASE1L3 (ENSECRG00000018431) ENSECRG00000018457 FLNB (ENSECRG00000018485) slmapa (ENSECRG00000018695) dennd6aa (ENSECRG00000018889) ARF4 (ENSECRG00000018935) pde12 (ENSECRG00000019009) atp6ap1lb (ENSECRG00000019045) ccdc174 (ENSECRG00000019123) #22 FGD5 (ENSECRG00000019175) #24 nr2c2 (ENSECRG00000019474) #25 mrps25 (ENSECRG00000019558) #26 RBSN (ENSECRG00000019602) #27 NT5DC2 (ENSECRG00000019645) UQCC5 (ENSECRG00000019677) PBRM1 (ENSECRG00000019732) ENSECRG00000019913 ENSECRG00000019944 glt8d1 (ENSECRG00000013772) spcs1 (ENSECRG00000013788) nek4 (ENSECRG00000013827) CAMK1 (ENSECRG00000013927) ccdc3b (ENSECRG00000014043) FAM107A (ENSECRG00000014165) Elephant shark MODERN SPECIES 1500 RNF123 (ENSCMIG00000001075) IP6K1 (ENSCMIG00000001052) ENSCMIG00000001047 acy1 (ENSCMIG00000001032) CACNA2D2 (ENSCMIG00000000661) tmem115 (ENSCMIG00000000556) abhd14a (ENSCMIG00000000546) tmcc1b (ENSCMIG00000000535) #29 PLXND1 (ENSCMIG00000000415) #30 ENSCMIG00000000328 #31 rho (ENSCMIG00000000254) #32 IFT122 (ENSCMIG00000000237) #33 ENSCMIG00000000225 ##34 ENSCMIG00000020095 ENSCMIG00000020094 CCDC174 (ENSCMIG00000020093) #22 cand2 (ENSCMIG00000020092) #10 sec13 (ENSCMIG00000020091) GRIP2 (ENSCMIG00000020090) #21 ENSCMIG00000020089 ENSCMIG00000020088 cav4a (ENSCMIG00000020087) cav3 (ENSCMIG00000020086) oxtr (ENSCMIG00000020085) ENSCMIG00000020084 tusc2a (ENSCMIG00000020083) rassf1 (ENSCMIG00000020082) zmynd10 (ENSCMIG00000020081) sema3h (ENSCMIG00000020080) ENSCMIG00000020079 APEH (ENSCMIG00000020078) Cyclostomata ANCESTRAL SPECIES ENSGT00440000033958 #22 Lamprey MODERN SPECIES 687 ENSPMAG00000001488 #22 ENSPMAG00000001487 Hagfish MODERN SPECIES 862 ENSEBUG00000005745 ENSEBUG00000007043 ENSEBUG00000012374 ENSEBUG00000011236 ENSEBUG00000015858 ENSEBUG00000008632 ENSEBUG00000013547 ENSEBUG00000007507 ENSEBUG00000002265 ENSEBUG00000006864 ENSEBUG00000013141 hyal6 (ENSEBUG00000009965) ENSEBUG00000001706 ENSEBUG00000016662 #22 ENSEBUG00000011773 gpn1 (ENSEBUG00000010184) ENSEBUG00000013670 dimt1l (ENSEBUG00000006158) ENSEBUG00000001520 ENSEBUG00000003654 ENSEBUG00000015117 ENSEBUG00000003793 ENSEBUG00000006380 nucb2a (ENSEBUG00000008172) ENSEBUG00000009294 rergla (ENSEBUG00000016398) ENSEBUG00000006577 ENSEBUG00000002638 ENSEBUG00000005648