Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000158222 #7	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392	ENSGT01030000234535.F.a	ENSGT01080000257410.A.f
Cetacea	ANCESTRAL SPECIES	2	ENSGT00390000009320.ab.a	ENSGT00940000158222 #7	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f.a #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392	ENSGT01030000234535.F.a	ENSGT01080000257410.A.f
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00390000009320.ab.a.a	ENSGT00940000158222 #7	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f.a #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00490000044635	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392	ENSGT01030000234535.F.a
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00390000009320.ab.a.a	ENSGT00940000158222 #7	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f.a #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00490000044635	ENSGT00940000157540.A #33	ENSGT00940000155338.a	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00390000009320.ab.a.a	ENSGT00940000158222 #7	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f.a #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000174256 #31	ENSGT00900000143321 #32	ENSGT00940000157540.A #33	ENSGT00940000155338.a	ENSGT00940000156291 #35	ENSGT00940000155909.i #36	ENSGT00940000158961.f #37
Monodontidae	ANCESTRAL SPECIES	22	ENSGT00390000009320.ab.a.a	ENSGT00940000158222 #7	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f.a #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000174256 #31	ENSGT00900000143321 #32	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00940000155909.i #36	ENSGT00940000158961.f #37	ENSGT00950000183112.a
Narwhal	MODERN SPECIES	308	SNRPN (ENSMMNG00015011647) #7	UBE3A (ENSMMNG00015011456) #8	ENSMMNG00015011428 #9	ENSMMNG00015011410 #10	GABRB3 (ENSMMNG00015011375) #11	ENSMMNG00015011346 #12	GABRG3 (ENSMMNG00015011324) #13	SELENOS (ENSMMNG00015011300) #14	CHSY1 (ENSMMNG00015011277) #15	LRRK1 (ENSMMNG00015011239) #16	ALDH1A3 (ENSMMNG00015011205) #17	ASB7 (ENSMMNG00015011178) #18	LINS1 (ENSMMNG00015011141) #19	CERS3 (ENSMMNG00015011108) #20	ADAMTS17 (ENSMMNG00015011079) #21	LYSMD4 (ENSMMNG00015011058) #22	MEF2A (ENSMMNG00015011012) #23	LRRC28 (ENSMMNG00015010990) #24	TTC23 (ENSMMNG00015010960) #25	SYNM (ENSMMNG00015010915) #26	IGF1R (ENSMMNG00015010863) #27	ENSMMNG00015010840 #28	ENSMMNG00015010816 #29	ARRDC4 (ENSMMNG00015010758) #30	ENSMMNG00015010739 #31	ENSMMNG00015010730 #32	NR2F2 (ENSMMNG00015010693) #33	ENSMMNG00015010668 #34	MCTP2 (ENSMMNG00015010543) #35	ENSMMNG00015010479 #36	ENSMMNG00015010463 #37
Beluga whale	MODERN SPECIES	52	ENSDLEG00000014207	SNRPN (ENSDLEG00000014174) #7	UBE3A (ENSDLEG00000007113) #8	ATP10A (ENSDLEG00000007092) #9	GABRB3 (ENSDLEG00000007078) #11	GABRA5 (ENSDLEG00000007067) #12	GABRG3 (ENSDLEG00000007042) #13	SELENOS (ENSDLEG00000007037) #14	CHSY1 (ENSDLEG00000007027) #15	LRRK1 (ENSDLEG00000007002) #16	ALDH1A3 (ENSDLEG00000006994) #17	ASB7 (ENSDLEG00000006990) #18	LINS1 (ENSDLEG00000006980) #19	CERS3 (ENSDLEG00000006971) #20	ADAMTS17 (ENSDLEG00000006922) #21	LYSMD4 (ENSDLEG00000006906) #22	MEF2A (ENSDLEG00000006900) #23	LRRC28 (ENSDLEG00000006888) #24	TTC23 (ENSDLEG00000006882) #25	SYNM (ENSDLEG00000006876) #26	IGF1R (ENSDLEG00000006865) #27	ENSDLEG00000006861 #28	ENSDLEG00000006848 #29	ARRDC4 (ENSDLEG00000006837) #30	ENSDLEG00000006833 #32	ENSDLEG00000006828	NR2F2 (ENSDLEG00000006824) #33	MCTP2 (ENSDLEG00000006742) #35	ENSDLEG00000006716 #36	SLC25A30 (ENSDLEG00000006711) #37	RGMA (ENSDLEG00000006705)
Vaquita	MODERN SPECIES	11	ENSPSNG00000008608	SNRPN (ENSPSNG00000008506) #7	UBE3A (ENSPSNG00000008097) #8	ATP10A (ENSPSNG00000008042) #9	GABRB3 (ENSPSNG00000007853) #11	ENSPSNG00000007765 #12	GABRG3 (ENSPSNG00000007646) #13	SELENOS (ENSPSNG00000007584) #14	CHSY1 (ENSPSNG00000007562) #15	LRRK1 (ENSPSNG00000007511) #16	ALDH1A3 (ENSPSNG00000007352) #17	ASB7 (ENSPSNG00000007278) #18	LINS1 (ENSPSNG00000007209) #19	CERS3 (ENSPSNG00000007138) #20	ADAMTS17 (ENSPSNG00000007060) #21	LYSMD4 (ENSPSNG00000007014) #22	MEF2A (ENSPSNG00000006923) #23	LRRC28 (ENSPSNG00000006850) #24	TTC23 (ENSPSNG00000006787) #25	SYNM (ENSPSNG00000006738) #26	IGF1R (ENSPSNG00000006634) #27	ENSPSNG00000006559 #28	ENSPSNG00000006523 #29	ARRDC4 (ENSPSNG00000006485) #30	ENSPSNG00000006439 #31	ENSPSNG00000006420 #32	NR2F2 (ENSPSNG00000006377) #33	ENSPSNG00000004222	MCTP2 (ENSPSNG00000004190) #35	ENSPSNG00000004145 #36	ENSPSNG00000004134 #37
Dolphin	MODERN SPECIES	1346																LYSMD4 (ENSTTRG00000015847) #22	MEF2A (ENSTTRG00000015831) #23
Sperm whale	MODERN SPECIES	2	SNRPN (ENSPCTG00005008845) #7	UBE3A (ENSPCTG00005009396) #8	ATP10A (ENSPCTG00005009469) #9	GABRB3 (ENSPCTG00005009807) #11	GABRA5 (ENSPCTG00005010049) #12	GABRG3 (ENSPCTG00005010080) #13	SELENOS (ENSPCTG00005010343) #14	CHSY1 (ENSPCTG00005010429) #15	ENSPCTG00005010476	LRRK1 (ENSPCTG00005010536) #16	ALDH1A3 (ENSPCTG00005010651) #17	ASB7 (ENSPCTG00005010877) #18	LINS1 (ENSPCTG00005010944) #19	CERS3 (ENSPCTG00005011060) #20	ADAMTS17 (ENSPCTG00005011170) #21	LYSMD4 (ENSPCTG00005011348) #22	MEF2A (ENSPCTG00005011471) #23	LRRC28 (ENSPCTG00005011551) #24	TTC23 (ENSPCTG00005011662) #25	SYNM (ENSPCTG00005011737) #26	IGF1R (ENSPCTG00005011814) #27	ENSPCTG00005011890 #28	ENSPCTG00005011931 #29	ARRDC4 (ENSPCTG00005011970) #30	NR2F2 (ENSPCTG00005012099)	ENSPCTG00005012170	MCTP2 (ENSPCTG00005012205) #35	ENSPCTG00005012340 #37	ENSPCTG00005012383	CHD2 (ENSPCTG00005012431)	FAM174B (ENSPCTG00005012546)
Blue whale	MODERN SPECIES	11	ATP10A (ENSBMSG00010008266) #9	ENSBMSG00010008236	ENSBMSG00010008226	GABRB3 (ENSBMSG00010008145) #11	ENSBMSG00010008110 #12	GABRG3 (ENSBMSG00010008082) #13	SELENOS (ENSBMSG00010008057) #14	CHSY1 (ENSBMSG00010008026) #15	LRRK1 (ENSBMSG00010007999) #16	ALDH1A3 (ENSBMSG00010007886) #17	ENSBMSG00010007868	ASB7 (ENSBMSG00010007863) #18	LINS1 (ENSBMSG00010007852) #19	CERS3 (ENSBMSG00010007841) #20	ADAMTS17 (ENSBMSG00010007680) #21	LYSMD4 (ENSBMSG00010007634) #22	ENSBMSG00010007622	MEF2A (ENSBMSG00010007583) #23	LRRC28 (ENSBMSG00010007523) #24	TTC23 (ENSBMSG00010007472) #25	SYNM (ENSBMSG00010007452) #26	IGF1R (ENSBMSG00010007366) #27	ENSBMSG00010007338 #28	ENSBMSG00010007279 #29	ENSBMSG00010007241 #30	NR2F2 (ENSBMSG00010007223) #33	ENSBMSG00010007193	MCTP2 (ENSBMSG00010007150) #35	RGMA (ENSBMSG00010007129)	CHD2 (ENSBMSG00010007020)	FAM174B (ENSBMSG00010006975)
Pecora	ANCESTRAL SPECIES	18	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT01100000263481.n.a.b.b	ENSGT00390000018141.i.a.b.b.b.b	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392	ENSGT01030000234535.F.a	ENSGT01080000257410.A.f
Percora_a	ANCESTRAL SPECIES	20	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT01100000263481.n.a.b.b	ENSGT00390000018141.i.a.b.b.b.b	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000153342.b.j	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392	ENSGT01030000234535.F.a
Bovidae	ANCESTRAL SPECIES	20	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT01100000263481.n.a.b.b	ENSGT00390000018141.i.a.b.b.b.b	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000153342.b.j	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00730000111392	ENSGT01030000234535.F.a
Bovinae	ANCESTRAL SPECIES	45	ENSGT00940000155050 #8	ENSGT00940000157895 #9	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000009588.pb.a.a.b	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523 #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00940000154451.l.b.b.a.b	ENSGT00940000158336	ENSGT01100000263514.B.m.b
Bos	ANCESTRAL SPECIES	18	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000009588.pb.a.a.b	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.a.a.a	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00950000183841.a	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523.d #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00390000007133.ib.a.b	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00940000154451.l.b.b.a.b	ENSGT00940000158336
Bos_a	ANCESTRAL SPECIES	79	ENSGT00940000156234.e.b ##12	ENSGT00940000156234.f #12	ENSGT00940000156234.e.a ##12	ENSGT00940000155607 #13	ENSGT00390000009588.pb.a.a.b.a	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00950000183841.a	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523.d #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00390000007133.ib.a.b	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00940000154451.l.b.b.a.b
Wild yak	MODERN SPECIES	146																LYSMD4 (ENSBMUG00000016042) #22	MEF2A (ENSBMUG00000016030) #23	LRRC28 (ENSBMUG00000016001) #24	TTC23 (ENSBMUG00000015962) #25	ENSBMUG00000015857 #26
Domestic yak	MODERN SPECIES	8	GABRB3 (ENSBGRG00000003940) #11	ENSBGRG00000004040	GABRA5 (ENSBGRG00000004069) #12	GABRG3 (ENSBGRG00000004154) #13	ENSBGRG00000004250	ENSBGRG00000004294	SELENOS (ENSBGRG00000004321) #14	CHSY1 (ENSBGRG00000004426) #15	LRRK1 (ENSBGRG00000004461) #16	ALDH1A3 (ENSBGRG00000004521) #17	ENSBGRG00000004632	ASB7 (ENSBGRG00000004639) #18	LINS1 (ENSBGRG00000004716) #19	CERS3 (ENSBGRG00000004770) #20	ADAMTS17 (ENSBGRG00000004987) #21	LYSMD4 (ENSBGRG00000005456) #22	MEF2A (ENSBGRG00000005494) #23	LRRC28 (ENSBGRG00000005615) #24	TTC23 (ENSBGRG00000005798) #25	SYNM (ENSBGRG00000005981) #26	IGF1R (ENSBGRG00000006060) #27	ENSBGRG00000006259 #28	ENSBGRG00000006286 #29	ENSBGRG00000006316	ARRDC4 (ENSBGRG00000006339) #30	NR2F2 (ENSBGRG00000006400) #33	ENSBGRG00000006472	ENSBGRG00000006524	ENSBGRG00000006535	ENSBGRG00000006550	MCTP2 (ENSBGRG00000006575) #35
Bos_b	ANCESTRAL SPECIES	44	ENSGT00940000154713.A #11	ENSGT00940000156234.f #12	ENSGT00940000155607 #13	ENSGT00390000009588.pb.a.a.b	ENSGT00390000015688 #14	ENSGT01050000244857.C.a.a #15	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.a.a.a	ENSGT00940000160363 #16	ENSGT00940000158815 #17	ENSGT00900000143686	ENSGT00940000158068 #18	ENSGT00390000001790 #19	ENSGT01030000234515.a.b.a.b #20	ENSGT00950000183841.a	ENSGT00940000158773 #21	ENSGT00940000160583 #22	ENSGT00940000156205 #23	ENSGT00940000157771 #24	ENSGT00530000063847.a #25	ENSGT00940000159268 #26	ENSGT00940000156682 #27	ENSGT00390000015368.a.b #28	ENSGT00510000048902.b #29	ENSGT00940000160523.d #30	ENSGT00940000157540.A #33	ENSGT00940000156291 #35	ENSGT00390000007133.ib.a.b	ENSGT00950000183112.a	ENSGT00940000155888	ENSGT00940000154451.l.b.b.a.b
Cow	MODERN SPECIES	13	GABRA5 (ENSBTAG00000003392) #12	ENSBTAG00000051536 #13	ENSBTAG00000035184	GABRG3 (ENSBTAG00000052298) #13	ENSBTAG00000034398	SELENOS (ENSBTAG00000000640) #14	CHSY1 (ENSBTAG00000007357) #15	LRRK1 (ENSBTAG00000001567) #16	ALDH1A3 (ENSBTAG00000009125) #17	ENSBTAG00000048684	ASB7 (ENSBTAG00000010514) #18	LINS1 (ENSBTAG00000016495) #19	CERS3 (ENSBTAG00000006987) #20	ENSBTAG00000049667	ADAMTS17 (ENSBTAG00000019823) #21	LYSMD4 (ENSBTAG00000010192) #22	MEF2A (ENSBTAG00000010649) #23	LRRC28 (ENSBTAG00000000539) #24	TTC23 (ENSBTAG00000011185) #25	SYNM (ENSBTAG00000011752) #26	IGF1R (ENSBTAG00000021527) #27	PGPEP1L (ENSBTAG00000021531) #28	ENSBTAG00000020514 #29	ARRDC4 (ENSBTAG00000018252) #30	NR2F2 (ENSBTAG00000018007) #33	MCTP2 (ENSBTAG00000013689) #35	ENSBTAG00000033335	ENSBTAG00000027075	RGMA (ENSBTAG00000018603)	CHD2 (ENSBTAG00000051831)	CHD2 (ENSBTAG00000017776)
Hybrid Bos Indicus	MODERN SPECIES	13	GABRA5 (ENSBIXG00005024931) #12	GABRG3 (ENSBIXG00005004245) #13	ENSBIXG00005024736	SELENOS (ENSBIXG00005024692) #14	CHSY1 (ENSBIXG00005024627) #15	ENSBIXG00005006488	LRRK1 (ENSBIXG00005006062) #16	ALDH1A3 (ENSBIXG00005024423) #17	ENSBIXG00005024290	ASB7 (ENSBIXG00005024255) #18	LINS1 (ENSBIXG00005006486) #19	ENSBIXG00005024210	CERS3 (ENSBIXG00005024198) #20	ENSBIXG00005024158	ADAMTS17 (ENSBIXG00005024103) #21	LYSMD4 (ENSBIXG00005023954) #22	MEF2A (ENSBIXG00005023860) #23	LRRC28 (ENSBIXG00005023571) #24	TTC23 (ENSBIXG00005023444) #25	SYNM (ENSBIXG00005003996) #26	IGF1R (ENSBIXG00005023256) #27	ENSBIXG00005023207 #28	ENSBIXG00005003959 #29	ARRDC4 (ENSBIXG00005006000) #30	NR2F2 (ENSBIXG00005003928) #33	ENSBIXG00005022923	MCTP2 (ENSBIXG00005022868) #35	ENSBIXG00005007765	ENSBIXG00005022756	ENSBIXG00005022728	RGMA (ENSBIXG00005022721)
American bison	MODERN SPECIES	3141	GABRB3 (ENSBBBG00000009697) #11	GABRA5 (ENSBBBG00000009693) #12	ENSBBBG00000009690 #13	ENSBBBG00000001576	GABRG3 (ENSBBBG00000009677) #13	ENSBBBG00000009671	SELENOS (ENSBBBG00000025499) #14	CHSY1 (ENSBBBG00000025389) #15	LRRK1 (ENSBBBG00000025376) #16	ALDH1A3 (ENSBBBG00000007771) #17	ENSBBBG00000025129	ASB7 (ENSBBBG00000006653) #18	LINS1 (ENSBBBG00000025096) #19	CERS3 (ENSBBBG00000008075) #20	ADAMTS17 (ENSBBBG00000025028) #21	LYSMD4 (ENSBBBG00000024984) #22	MEF2A (ENSBBBG00000024972) #23	LRRC28 (ENSBBBG00000024946) #24	TTC23 (ENSBBBG00000024916) #25	ENSBBBG00000006816 #26	IGF1R (ENSBBBG00000006525) #27	ENSBBBG00000006470 #28	ENSBBBG00000006456 #29	ARRDC4 (ENSBBBG00000006433) #30
Caprinae	ANCESTRAL SPECIES	22	ENSGT01030000234535.F.a	ENSGT00730000111392	ENSGT00940000155888	ENSGT00950000183112.a	ENSGT00940000156291 #35	ENSGT00940000157540.A #33	ENSGT00940000153342.b.j	ENSGT00940000160523 #30	ENSGT00510000048902.b #29	ENSGT00390000015368.a.b #28	ENSGT00940000156682 #27	ENSGT00940000159268 #26	ENSGT00530000063847.a #25	ENSGT00940000157771.h #24	ENSGT00940000156205 #23	ENSGT00940000160583 #22	ENSGT00940000158773 #21	ENSGT01030000234515.a.b.a.b #20	ENSGT00390000001790 #19	ENSGT00940000158068 #18	ENSGT00900000143686	ENSGT00940000158815 #17	ENSGT00940000160363 #16	ENSGT01050000244857.C.a.a #15	ENSGT00390000015688.a #14	ENSGT00940000155607 #13	ENSGT00940000156234.f #12	ENSGT00940000154713.A #11	ENSGT00940000157895 #9	ENSGT00940000155050 #8	ENSGT00940000164524
Goat	MODERN SPECIES	13	ENSCHIG00000009185	CHD2 (ENSCHIG00000022261)	RGMA (ENSCHIG00000014333)	MCTP2 (ENSCHIG00000024924) #35	NR2F2 (ENSCHIG00000023141) #33	ENSCHIG00000006032	ARRDC4 (ENSCHIG00000021973) #30	ENSCHIG00000011322	ENSCHIG00000016623 #29	ENSCHIG00000022156 #28	IGF1R (ENSCHIG00000023990) #27	SYNM (ENSCHIG00000016711) #26	TTC23 (ENSCHIG00000014563) #25	ENSCHIG00000010197 #24	MEF2A (ENSCHIG00000024497) #23	LYSMD4 (ENSCHIG00000018838) #22	ADAMTS17 (ENSCHIG00000016863) #21	CERS3 (ENSCHIG00000025546) #20	LINS1 (ENSCHIG00000009033) #19	ASB7 (ENSCHIG00000009823) #18	ALDH1A3 (ENSCHIG00000020729) #17	LRRK1 (ENSCHIG00000024029) #16	CHSY1 (ENSCHIG00000026238) #15	ENSCHIG00000023492 #14	ENSCHIG00000023151	GABRG3 (ENSCHIG00000024578) #13	ENSCHIG00000014564 #13	GABRA5 (ENSCHIG00000023746) #12	GABRB3 (ENSCHIG00000021468) #11	ENSCHIG00000022386	ATP10A (ENSCHIG00000007182) #9
Rambouillet Sheep	MODERN SPECIES	9	FAM174B (ENSOARG00020006694)	CHD2 (ENSOARG00020006205)	RGMA (ENSOARG00020006145)	MCTP2 (ENSOARG00020006028) #35	ENSOARG00020006012	ENSOARG00020005988	NR2F2 (ENSOARG00020005894) #33	ENSOARG00020005874	ENSOARG00020005858	ARRDC4 (ENSOARG00020005803) #30	IGF1R (ENSOARG00020005176) #27	SYNM (ENSOARG00020005117) #26	TTC23 (ENSOARG00020005052) #25	ENSOARG00020004927 #24	MEF2A (ENSOARG00020004819) #23	LYSMD4 (ENSOARG00020004742) #22	ADAMTS17 (ENSOARG00020004620) #21	CERS3 (ENSOARG00020004593) #20	ASB7 (ENSOARG00020004526) #18	ENSOARG00020004515	ALDH1A3 (ENSOARG00020004379) #17	LRRK1 (ENSOARG00020003980) #16	ENSOARG00020003929 #15	ENSOARG00020003892 #14	ENSOARG00020003880	GABRG3 (ENSOARG00020003804) #13	GABRA5 (ENSOARG00020003769) #12	GABRB3 (ENSOARG00020003644) #11	ENSOARG00020003603	RPS25 (ENSOARG00020003579)	ATP10A (ENSOARG00020003485) #9
Siberian musk deer	MODERN SPECIES	1279								CHSY1 (ENSMMSG00000014585) #15	LRRK1 (ENSMMSG00000014530) #16	ALDH1A3 (ENSMMSG00000014488) #17	ENSMMSG00000014474	ASB7 (ENSMMSG00000014449) #18	LINS1 (ENSMMSG00000014428) #19	CERS3 (ENSMMSG00000014392) #20	ADAMTS17 (ENSMMSG00000014339) #21	LYSMD4 (ENSMMSG00000014321) #22	ENSMMSG00000014308	MEF2A (ENSMMSG00000014165) #23	LRRC28 (ENSMMSG00000014116) #24	TTC23 (ENSMMSG00000014084) #25	ENSMMSG00000014069 #26	ENSMMSG00000014049 #26	IGF1R (ENSMMSG00000014002) #27	ENSMMSG00000013975 #28	ENSMMSG00000013884 #29	ARRDC4 (ENSMMSG00000013851) #30	ENSMMSG00000013831	NR2F2 (ENSMMSG00000013806) #33
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	4	ENSCHYG00000005590 #9	ENSCHYG00000005608	GABRB3 (ENSCHYG00000005619) #11	ENSCHYG00000005633	GABRA5 (ENSCHYG00000005654) #12	GABRG3 (ENSCHYG00000005703) #13	SELENOS (ENSCHYG00000005762) #14	CHSY1 (ENSCHYG00000005857) #15	LRRK1 (ENSCHYG00000005930) #16	ALDH1A3 (ENSCHYG00000006301) #17	ENSCHYG00000006386	ASB7 (ENSCHYG00000006398) #18	LINS1 (ENSCHYG00000006425) #19	CERS3 (ENSCHYG00000006461) #20	ADAMTS17 (ENSCHYG00000006512) #21	ENSCHYG00000006649 #22	MEF2A (ENSCHYG00000006733) #23	LRRC28 (ENSCHYG00000006817) #24	TTC23 (ENSCHYG00000006873) #25	SYNM (ENSCHYG00000006912) #26	IGF1R (ENSCHYG00000006955) #27	ENSCHYG00000007085 #28	ENSCHYG00000007128 #29	ARRDC4 (ENSCHYG00000007186) #30	ENSCHYG00000007241	ENSCHYG00000007264	ENSCHYG00000007283	ENSCHYG00000007293	MCTP2 (ENSCHYG00000007330) #35	RGMA (ENSCHYG00000007668)	CHD2 (ENSCHYG00000007751)
Yarkand deer	MODERN SPECIES	1323	POF1B (ENSCHYG00000021264)	DACH2 (ENSCHYG00000020337)	ENSCHYG00000020263	KLHL4 (ENSCHYG00000020155)	ENSCHYG00000020043	ENSCHYG00000020012	ENSCHYG00000019820	PABPC5 (ENSCHYG00000019770)	ENSCHYG00000019710	ENSCHYG00000019678	ENSCHYG00000019618	ENSCHYG00000019408	ENSCHYG00000019346	FAM133A (ENSCHYG00000019252)	ENSCHYG00000019126	ENSCHYG00000019101 #22	ENSCHYG00000019061	ENSCHYG00000018986	ENSCHYG00000018943	DIAPH2 (ENSCHYG00000018624)	ENSCHYG00000018566	ENSCHYG00000018504	ENSCHYG00000018486	ENSCHYG00000018452	ENSCHYG00000018423	PCDH19 (ENSCHYG00000018307)	ENSCHYG00000018281	TNMD (ENSCHYG00000018219)	TSPAN6 (ENSCHYG00000017982)	SRPX2 (ENSCHYG00000017819)	ENSCHYG00000017775