Euteleostomi	ANCESTRAL SPECIES	127						ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00940000159823 #18	ENSGT00730000111880	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Sarcopterygii	ANCESTRAL SPECIES	156							ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Tetrapoda	ANCESTRAL SPECIES	25							ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Amniota	ANCESTRAL SPECIES	2	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Mammalia	ANCESTRAL SPECIES	1	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Theria	ANCESTRAL SPECIES	6	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Eutheria	ANCESTRAL SPECIES	2	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Glires	ANCESTRAL SPECIES	8	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Rodentia	ANCESTRAL SPECIES	13	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Hystricomorpha	ANCESTRAL SPECIES	38	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Long-tailed chinchilla	MODERN SPECIES	203	ELOVL6 (ENSCLAG00000003163) #7	EGF (ENSCLAG00000003331) #8	LRIT3 (ENSCLAG00000004694) #9	RRH (ENSCLAG00000005130) #10	GAR1 (ENSCLAG00000005335) #11	CFI (ENSCLAG00000006216) #12	PLA2G12A (ENSCLAG00000006595) #13	CASP6 (ENSCLAG00000003293) #14	MCUB (ENSCLAG00000003597) #15	SEC24B (ENSCLAG00000004027) #16	ENSCLAG00000002421 #17	COL25A1 (ENSCLAG00000002719) #18	ETNPPL (ENSCLAG00000002982) #19	OSTC (ENSCLAG00000003790) #20	ENSCLAG00000003911 #21	LEF1 (ENSCLAG00000003044) #22	HADH (ENSCLAG00000003966) #23	CYP2U1 (ENSCLAG00000002674) #24	SGMS2 (ENSCLAG00000002723) #25	PAPSS1 (ENSCLAG00000002840) #26	DKK2 (ENSCLAG00000002881) #27	GIMD1 (ENSCLAG00000003485) #28	AIMP1 (ENSCLAG00000003954) #29	TBCK (ENSCLAG00000004392) #30	NPNT (ENSCLAG00000002301) #31	GSTCD (ENSCLAG00000002751) #32	INTS12 (ENSCLAG00000003066) #33	ARHGEF38 (ENSCLAG00000003103) #34	PPA2 (ENSCLAG00000004964) #35	TET2 (ENSCLAG00000005412) #36	ENSCLAG00000005638 #37
Degu	MODERN SPECIES	57	LRIT3 (ENSODEG00000014302) #9	RRH (ENSODEG00000010773) #10	GAR1 (ENSODEG00000011083) #11	CFI (ENSODEG00000010069) #12	ENSODEG00000011603 #13	CASP6 (ENSODEG00000010252) #14	MCUB (ENSODEG00000010641) #15	SEC24B (ENSODEG00000011940) #16	ENSODEG00000019962	ENSODEG00000011204	COL25A1 (ENSODEG00000011565) #18	ETNPPL (ENSODEG00000011007) #19	OSTC (ENSODEG00000011874) #20	ENSODEG00000012716 ##21	ENSODEG00000019987	LEF1 (ENSODEG00000010436) #22	HADH (ENSODEG00000011168) #23	CYP2U1 (ENSODEG00000010344) #24	SGMS2 (ENSODEG00000010387) #25	PAPSS1 (ENSODEG00000012464) #26	DKK2 (ENSODEG00000013005) #27	GIMD1 (ENSODEG00000011081) #28	ENSODEG00000010617 #29	ENSODEG00000011791	NPNT (ENSODEG00000012616) #31	GSTCD (ENSODEG00000011298) #32	INTS12 (ENSODEG00000010716) #33	ENSODEG00000011418 #34	ENSODEG00000010989 #34	ENSODEG00000011526	ENSODEG00000012068
Guinea pig	MODERN SPECIES	43	ELOVL6 (ENSCPOG00000038802) #7	EGF (ENSCPOG00000000779) #8	LRIT3 (ENSCPOG00000000776) #9	RRH (ENSCPOG00000004217) #10	GAR1 (ENSCPOG00000004216) #11	CFI (ENSCPOG00000004214) #12	PLA2G12A (ENSCPOG00000004212) #13	CASP6 (ENSCPOG00000031434) #14	ENSCPOG00000002110 #15	ENSCPOG00000022594	SEC24B (ENSCPOG00000009212) #16	COL25A1 (ENSCPOG00000012595) #18	ETNPPL (ENSCPOG00000015368) #19	OSTC (ENSCPOG00000039456) #20	ENSCPOG00000037181 #21	LEF1 (ENSCPOG00000013758) #22	HADH (ENSCPOG00000024229) #23	CYP2U1 (ENSCPOG00000011750) #24	SGMS2 (ENSCPOG00000032233) #25	PAPSS1 (ENSCPOG00000011505) #26	DKK2 (ENSCPOG00000030616) #27	AIMP1 (ENSCPOG00000006734) #29	TBCK (ENSCPOG00000006708) #30	NPNT (ENSCPOG00000006697) #31	GSTCD (ENSCPOG00000008688) #32	INTS12 (ENSCPOG00000009129) #33	ENSCPOG00000039865 #34	ENSCPOG00000024558 #34	ENSCPOG00000023083	PPA2 (ENSCPOG00000012683) #35	TET2 (ENSCPOG00000005784) #36
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000003109	ENSHGLG00000001432 #16	ENSHGLG00000000975 #15	CASP6 (ENSHGLG00000000729) #14	PLA2G12A (ENSHGLG00000000692) #13	GAR1 (ENSHGLG00000000493) #11	RRH (ENSHGLG00000004643) #10	ENSHGLG00000002404 #8	ENSHGLG00000034086	ELOVL6 (ENSHGLG00000037368) #7	ENPEP (ENSHGLG00000002965)	ENSHGLG00000047113	ENSHGLG00000004469 #19	ENSHGLG00000001959 #20	RPL34 (ENSHGLG00000050296) ##21	LEF1 (ENSHGLG00000046551) #22	HADH (ENSHGLG00000032988) #23	ENSHGLG00000038714 #24	PAPSS1 (ENSHGLG00000001783) #26	ENSHGLG00000044153	DKK2 (ENSHGLG00000032510) #27	GIMD1 (ENSHGLG00000003404) #28	AIMP1 (ENSHGLG00000003860) #29	TBCK (ENSHGLG00000008209) #30	ENSHGLG00000034242	NPNT (ENSHGLG00000001987) #31	GSTCD (ENSHGLG00000001718) #32	ENSHGLG00000050195	INTS12 (ENSHGLG00000002096) #33	ARHGEF38 (ENSHGLG00000034470) #34	ENSHGLG00000001427 #34
Sciuridae	ANCESTRAL SPECIES	43	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Marmotini	ANCESTRAL SPECIES	51	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984.e #23	ENSGT00940000157714.g #24	ENSGT00940000157714.h #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Alpin marmot	MODERN SPECIES	14	ENSMMMG00000011001	ELOVL6 (ENSMMMG00000010968) #7	EGF (ENSMMMG00000010685) #8	ENSMMMG00000010673	LRIT3 (ENSMMMG00000010663) #9	RRH (ENSMMMG00000010634) #10	GAR1 (ENSMMMG00000010623) #11	CFI (ENSMMMG00000010613) #12	PLA2G12A (ENSMMMG00000010605) #13	CASP6 (ENSMMMG00000010597) #14	SEC24B (ENSMMMG00000010546) #16	COL25A1 (ENSMMMG00000010402) #18	ETNPPL (ENSMMMG00000010343) #19	OSTC (ENSMMMG00000010326) #20	RPL34 (ENSMMMG00000010314) ##21	LEF1 (ENSMMMG00000010193) #22	ENSMMMG00000010164 #23	ENSMMMG00000010161 #24	ENSMMMG00000010155 #24	SGMS2 (ENSMMMG00000010143) #25	PAPSS1 (ENSMMMG00000010079) #26	DKK2 (ENSMMMG00000010025) #27	ENSMMMG00000009991	GIMD1 (ENSMMMG00000009944) #28	AIMP1 (ENSMMMG00000009938) #29	TBCK (ENSMMMG00000009872) #30	NPNT (ENSMMMG00000009207) #31	GSTCD (ENSMMMG00000009168) #32	ENSMMMG00000009146 #33	ARHGEF38 (ENSMMMG00000009110) #34	PPA2 (ENSMMMG00000009033) #35
Marmotini_b	ANCESTRAL SPECIES	199															ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984.e #23	ENSGT00940000157714.g #24	ENSGT00940000157714.h #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Arctic ground squirrel	MODERN SPECIES	286															ENSUPAG00010008601 #21	LEF1 (ENSUPAG00010008645) #22	ENSUPAG00010008957 #23	CYP2U1 (ENSUPAG00010008973) #24	SGMS2 (ENSUPAG00010008979) #25	PAPSS1 (ENSUPAG00010008992) #26	DKK2 (ENSUPAG00010009013) #27	GIMD1 (ENSUPAG00010009027) #28	AIMP1 (ENSUPAG00010009041) #29	TBCK (ENSUPAG00010009048) #30	NPNT (ENSUPAG00010009088) #31	ENSUPAG00010009407 #32
Squirrel	MODERN SPECIES	418														ENSSTOG00000021644 #20	RPL34 (ENSSTOG00000025964) ##21	LEF1 (ENSSTOG00000001371) #22	HADH (ENSSTOG00000001362) #23	CYP2U1 (ENSSTOG00000001353) #24	SGMS2 (ENSSTOG00000001349) #25	PAPSS1 (ENSSTOG00000009455) #26
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	18	LRIT3 (ENSSVLG00005025995) #9	RRH (ENSSVLG00005025996) #10	GAR1 (ENSSVLG00005025997) #11	CFI (ENSSVLG00005025998) #12	PLA2G12A (ENSSVLG00005025999) #13	ENSSVLG00005026000 #14	MCUB (ENSSVLG00005026001) #15	SEC24B (ENSSVLG00005026003) #16	ENSSVLG00005026004	COL25A1 (ENSSVLG00005026005) #18	ENSSVLG00005026006	ETNPPL (ENSSVLG00005026007) #19	OSTC (ENSSVLG00005026008) #20	RPL34 (ENSSVLG00005026009) ##21	ENSSVLG00005026011	ENSSVLG00005026012 #22	HADH (ENSSVLG00005026013) #23	CYP2U1 (ENSSVLG00005026014) #24	SGMS2 (ENSSVLG00005026015) #25	PAPSS1 (ENSSVLG00005026017) #26	DKK2 (ENSSVLG00005026018) #27	GIMD1 (ENSSVLG00005004555) #28	AIMP1 (ENSSVLG00005004580) #29	TBCK (ENSSVLG00005004638) #30	NPNT (ENSSVLG00005004815) #31	GSTCD (ENSSVLG00005005238) #32	ENSSVLG00005005324 #33	ENSSVLG00005005384 #34	ENSSVLG00005005442 #34	ENSSVLG00005005487	PPA2 (ENSSVLG00005005595) #35
Eurasian red squirrel	MODERN SPECIES	7	OXSR1 (ENSSVLG00005024902)	MYD88 (ENSSVLG00005024794)	ENSSVLG00005024767	XYLB (ENSSVLG00005024748)	ACVR2B (ENSSVLG00005024714)	EXOG (ENSSVLG00005024674)	ENSSVLG00005024654	SCN5A (ENSSVLG00005023875)	SCN10A (ENSSVLG00005023368)	SCN11A (ENSSVLG00005022915)	WDR48 (ENSSVLG00005022801)	GORASP1 (ENSSVLG00005022690)	TTC21A (ENSSVLG00005022643)	CSRNP1 (ENSSVLG00005022609)	XIRP1 (ENSSVLG00005022577)	ENSSVLG00005022561 #22	CX3CR1 (ENSSVLG00005022515)	ENSSVLG00005022488	ENSSVLG00005022470	SLC25A38 (ENSSVLG00005022356)	ENSSVLG00005022288	ENSSVLG00005022262	ENSSVLG00005022240	MYRIP (ENSSVLG00005021784)	EIF1B (ENSSVLG00005021694)	ENTPD3 (ENSSVLG00005021557)	RPL14 (ENSSVLG00005021436)	ZNF619 (ENSSVLG00005021377)	ZNF621 (ENSSVLG00005021120)	ENSSVLG00005021100	CTNNB1 (ENSSVLG00005020963)
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Kangaroo rat	MODERN SPECIES	389	Elovl6 (ENSDORG00000029654) #7	ENSDORG00000000490 #8	Lrit3 (ENSDORG00000027458) #9	Rrh (ENSDORG00000000486) #10	Gar1 (ENSDORG00000000482) #11	Cfi (ENSDORG00000011881) #12	Pla2g12a (ENSDORG00000011877) #13	Casp6 (ENSDORG00000012993) #14	Mcub (ENSDORG00000012992) #15	Sec24b (ENSDORG00000003039) #16	ENSDORG00000024600	Col25a1 (ENSDORG00000004118) #18	Etnppl (ENSDORG00000004115) #19	Ostc (ENSDORG00000027386) #20	Rpl34 (ENSDORG00000025054) ##21	Lef1 (ENSDORG00000007694) #22	Hadh (ENSDORG00000015829) #23	Cyp2u1 (ENSDORG00000010109) #24	Sgms2 (ENSDORG00000010107) #25	Papss1 (ENSDORG00000010043) #26	Dkk2 (ENSDORG00000025181) #27	Gimd1 (ENSDORG00000026034) #28	ENSDORG00000005018 #29	ENSDORG00000012577 #30	Npnt (ENSDORG00000009968) #31	Gstcd (ENSDORG00000009964) #32	Ints12 (ENSDORG00000023765) #33	Arhgef38 (ENSDORG00000029430) #34	ENSDORG00000027089	Ppa2 (ENSDORG00000013455) #35	ENSDORG00000003728 #37
Myomorpha	ANCESTRAL SPECIES	42	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Muroidea	ANCESTRAL SPECIES	53	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Chinese hamster chok1gshd	MODERN SPECIES	66	Enpep (ENSCGRG00001007343)	ELOVL6 (ENSCGRG00001016844) #7	Egf (ENSCGRG00001015336) #8	Lrit3 (ENSCGRG00001024786) #9	Rrh (ENSCGRG00001022555) #10	Gar1 (ENSCGRG00001003919) #11	Cfi (ENSCGRG00001008062) #12	Pla2g12a (ENSCGRG00001020911) #13	ENSCGRG00001021697 #14	Mcub (ENSCGRG00001013554) #15	Sec24b (ENSCGRG00001011377) #16	Col25a1 (ENSCGRG00001016091) #18	Etnppl (ENSCGRG00001001866) #19	ENSCGRG00001012885 #20	Rpl34 (ENSCGRG00001011923) ##21	Lef1 (ENSCGRG00001022697) #22	Hadh (ENSCGRG00001022551) #23	Cyp2u1 (ENSCGRG00001000440) #24	Sgms2 (ENSCGRG00001022561) #25	Papss1 (ENSCGRG00001022641) #26	Dkk2 (ENSCGRG00001015913) #27	Gimd1 (ENSCGRG00001011642) #28	Aimp1 (ENSCGRG00001012622) #29	Tbck (ENSCGRG00001014137) #30	Npnt (ENSCGRG00001011234) #31	Gstcd (ENSCGRG00001013678) #32	Ints12 (ENSCGRG00001017648) #33	Arhgef38 (ENSCGRG00001012615) #34	Ppa2 (ENSCGRG00001013135) #35	ENSCGRG00001016201 #36	Cxxc4 (ENSCGRG00001012155) #37
Golden Hamster	MODERN SPECIES	754	ENSMAUG00000019195	ENSMAUG00000015497 #8	Lrit3 (ENSMAUG00000015406) #9	Rrh (ENSMAUG00000016461) #10	Gar1 (ENSMAUG00000016788) #11	Cfi (ENSMAUG00000020863) #12	Pla2g12a (ENSMAUG00000019760) #13	Casp6 (ENSMAUG00000012070) #14	Mcub (ENSMAUG00000002957) #15	Sec24b (ENSMAUG00000017584) #16	Col25a1 (ENSMAUG00000011716) #18	Etnppl (ENSMAUG00000014103) #19	Ostc (ENSMAUG00000017087) #20	ENSMAUG00000014918 #21	ENSMAUG00000002715	Lef1 (ENSMAUG00000005718) #22	Hadh (ENSMAUG00000015697) #23	Cyp2u1 (ENSMAUG00000015035) #24	Sgms2 (ENSMAUG00000010473) #25	Papss1 (ENSMAUG00000014765) #26
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Prairie vole	MODERN SPECIES	8	Enpep (ENSMOCG00000015521)	Elovl6 (ENSMOCG00000001659) #7	ENSMOCG00000006880 #8	Lrit3 (ENSMOCG00000012841) #9	Rrh (ENSMOCG00000014201) #10	Gar1 (ENSMOCG00000001340) #11	Cfi (ENSMOCG00000013835) #12	Pla2g12a (ENSMOCG00000000301) #13	Casp6 (ENSMOCG00000019140) #14	Mcub (ENSMOCG00000001391) #15	Sec24b (ENSMOCG00000010749) #16	Col25a1 (ENSMOCG00000005127) #18	Etnppl (ENSMOCG00000013627) #19	Ostc (ENSMOCG00000003130) #20	ENSMOCG00000012371 #21	Lef1 (ENSMOCG00000017897) #22	Hadh (ENSMOCG00000002166) #23	Cyp2u1 (ENSMOCG00000012427) #24	Sgms2 (ENSMOCG00000008205) #25	Papss1 (ENSMOCG00000012328) #26	ENSMOCG00000013454	Dkk2 (ENSMOCG00000016432) #27	Gimd1 (ENSMOCG00000017308) #28	ENSMOCG00000001103 #29	Tbck (ENSMOCG00000000214) #30	Npnt (ENSMOCG00000016277) #31	Gstcd (ENSMOCG00000012500) #32	Ints12 (ENSMOCG00000014627) #33	Arhgef38 (ENSMOCG00000000958) #34	ENSMOCG00000010005	Ppa2 (ENSMOCG00000021031) #35
Northern American deer mouse	MODERN SPECIES	19	Enpep (ENSPEMG00000012340)	Elovl6 (ENSPEMG00000030330) #7	Egf (ENSPEMG00000016237) #8	Lrit3 (ENSPEMG00000008291) #9	Rrh (ENSPEMG00000008715) #10	Gar1 (ENSPEMG00000015838) #11	Cfi (ENSPEMG00000017557) #12	Pla2g12a (ENSPEMG00000014433) #13	ENSPEMG00000011964 #14	Mcub (ENSPEMG00000008411) #15	Sec24b (ENSPEMG00000016956) #16	Col25a1 (ENSPEMG00000000474) #18	Etnppl (ENSPEMG00000009696) #19	Ostc (ENSPEMG00000001349) #20	ENSPEMG00000010540 #21	Lef1 (ENSPEMG00000011796) #22	Hadh (ENSPEMG00000020330) #23	Cyp2u1 (ENSPEMG00000012213) #24	Sgms2 (ENSPEMG00000027110) #25	Papss1 (ENSPEMG00000008733) #26	Dkk2 (ENSPEMG00000024321) #27	Gimd1 (ENSPEMG00000010104) #28	Aimp1 (ENSPEMG00000003730) #29	Tbck (ENSPEMG00000008071) #30	Npnt (ENSPEMG00000008059) #31	Gstcd (ENSPEMG00000007441) #32	Ints12 (ENSPEMG00000005181) #33	Arhgef38 (ENSPEMG00000008305) #34	Ppa2 (ENSPEMG00000015922) #35	ENSPEMG00000014121	Tet2 (ENSPEMG00000003379) #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Mus	ANCESTRAL SPECIES	7	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Mouse	MODERN SPECIES	12	Enpep (ENSMUSG00000028024)	Elovl6 (ENSMUSG00000041220) #7	Egf (ENSMUSG00000028017) #8	Lrit3 (ENSMUSG00000093865) #9	Rrh (ENSMUSG00000028012) #10	Gar1 (ENSMUSG00000028010) #11	Cfi (ENSMUSG00000058952) #12	Pla2g12a (ENSMUSG00000027999) #13	Casp6 (ENSMUSG00000027997) #14	Mcub (ENSMUSG00000027994) #15	Sec24b (ENSMUSG00000001052) #16	Col25a1 (ENSMUSG00000058897) #18	Etnppl (ENSMUSG00000019232) #19	Ostc (ENSMUSG00000041084) #20	Rpl34 (ENSMUSG00000062006) ##21	Lef1 (ENSMUSG00000027985) #22	Hadh (ENSMUSG00000027984) #23	Cyp2u1 (ENSMUSG00000027983) #24	Sgms2 (ENSMUSG00000050931) #25	Papss1 (ENSMUSG00000028032) #26	Dkk2 (ENSMUSG00000028031) #27	Gimd1 (ENSMUSG00000091721) #28	Aimp1 (ENSMUSG00000028029) #29	Tbck (ENSMUSG00000028030) #30	Npnt (ENSMUSG00000040998) #31	Gstcd (ENSMUSG00000028018) #32	Ints12 (ENSMUSG00000028016) #33	Arhgef38 (ENSMUSG00000040969) #34	Ppa2 (ENSMUSG00000028013) #35	Tet2 (ENSMUSG00000040943) #36	Cxxc4 (ENSMUSG00000044365) #37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Steppe mouse	MODERN SPECIES	3091	Egf (ENSMSIG00000030560) #8	Lrit3 (ENSMSIG00000030577) #9	Rrh (ENSMSIG00000030581) #10	Gar1 (ENSMSIG00000030600) #11	Cfi (ENSMSIG00000030603) #12	Pla2g12a (ENSMSIG00000030605) #13	Casp6 (ENSMSIG00000030608) #14	Mcub (ENSMSIG00000030610) #15	Sec24b (ENSMSIG00000030615) #16	Col25a1 (ENSMSIG00000030632) #18	Etnppl (ENSMSIG00000030647) #19	Ostc (ENSMSIG00000030653) #20	Rpl34 (ENSMSIG00000030659) ##21	ENSMSIG00000030662	ENSMSIG00000030668	Lef1 (ENSMSIG00000030670) #22	Hadh (ENSMSIG00000030700) #23	Cyp2u1 (ENSMSIG00000030701) #24	Sgms2 (ENSMSIG00000030706) #25	Papss1 (ENSMSIG00000030712) #26
spretus	MODERN SPECIES	12	Enpep (MGP_SPRETEiJ_G0026575)	Elovl6 (MGP_SPRETEiJ_G0026576) #7	Egf (MGP_SPRETEiJ_G0026577) #8	Lrit3 (MGP_SPRETEiJ_G0026578) #9	Rrh (MGP_SPRETEiJ_G0026579) #10	Gar1 (MGP_SPRETEiJ_G0026580) #11	MGP_SPRETEiJ_G0026581 #12	Pla2g12a (MGP_SPRETEiJ_G0026582) #13	Casp6 (MGP_SPRETEiJ_G0026583) #14	Mcub (MGP_SPRETEiJ_G0026584) #15	Sec24b (MGP_SPRETEiJ_G0026585) #16	Col25a1 (MGP_SPRETEiJ_G0026586) #18	Etnppl (MGP_SPRETEiJ_G0026587) #19	Ostc (MGP_SPRETEiJ_G0026588) #20	Rpl34 (MGP_SPRETEiJ_G0026589) ##21	Lef1 (MGP_SPRETEiJ_G0026590) #22	Hadh (MGP_SPRETEiJ_G0026591) #23	Cyp2u1 (MGP_SPRETEiJ_G0026592) #24	Sgms2 (MGP_SPRETEiJ_G0026593) #25	Papss1 (MGP_SPRETEiJ_G0026594) #26	Dkk2 (MGP_SPRETEiJ_G0026595) #27	Gimd1 (MGP_SPRETEiJ_G0026596) #28	Aimp1 (MGP_SPRETEiJ_G0026597) #29	Tbck (MGP_SPRETEiJ_G0026598) #30	Npnt (MGP_SPRETEiJ_G0026599) #31	Gstcd (MGP_SPRETEiJ_G0026600) #32	Ints12 (MGP_SPRETEiJ_G0026601) #33	Arhgef38 (MGP_SPRETEiJ_G0026602) #34	Ppa2 (MGP_SPRETEiJ_G0026603) #35	Tet2 (MGP_SPRETEiJ_G0026604) #36	MGP_SPRETEiJ_G0026606 #37
Ryukyu mouse	MODERN SPECIES	12	Enpep (MGP_CAROLIEiJ_G0025622)	Elovl6 (MGP_CAROLIEiJ_G0025623) #7	Egf (MGP_CAROLIEiJ_G0025624) #8	Lrit3 (MGP_CAROLIEiJ_G0025625) #9	Rrh (MGP_CAROLIEiJ_G0025626) #10	Gar1 (MGP_CAROLIEiJ_G0025627) #11	Cfi (MGP_CAROLIEiJ_G0025628) #12	Pla2g12a (MGP_CAROLIEiJ_G0025629) #13	Casp6 (MGP_CAROLIEiJ_G0025630) #14	Mcub (MGP_CAROLIEiJ_G0025631) #15	Sec24b (MGP_CAROLIEiJ_G0025632) #16	Col25a1 (MGP_CAROLIEiJ_G0025633) #18	Etnppl (MGP_CAROLIEiJ_G0025634) #19	Ostc (MGP_CAROLIEiJ_G0025635) #20	Rpl34 (MGP_CAROLIEiJ_G0025636) ##21	Lef1 (MGP_CAROLIEiJ_G0025637) #22	Hadh (MGP_CAROLIEiJ_G0025638) #23	Cyp2u1 (MGP_CAROLIEiJ_G0025639) #24	Sgms2 (MGP_CAROLIEiJ_G0025640) #25	Papss1 (MGP_CAROLIEiJ_G0025641) #26	Dkk2 (MGP_CAROLIEiJ_G0025642) #27	Gimd1 (MGP_CAROLIEiJ_G0025643) #28	Aimp1 (MGP_CAROLIEiJ_G0025644) #29	Tbck (MGP_CAROLIEiJ_G0025645) #30	Npnt (MGP_CAROLIEiJ_G0025646) #31	Gstcd (MGP_CAROLIEiJ_G0025647) #32	Ints12 (MGP_CAROLIEiJ_G0025648) #33	Arhgef38 (MGP_CAROLIEiJ_G0025649) #34	Ppa2 (MGP_CAROLIEiJ_G0025650) #35	Tet2 (MGP_CAROLIEiJ_G0025651) #36	Cxxc4 (MGP_CAROLIEiJ_G0025652) #37
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0027071	Elovl6 (MGP_PahariEiJ_G0027072) #7	Egf (MGP_PahariEiJ_G0027073) #8	Lrit3 (MGP_PahariEiJ_G0027074) #9	Rrh (MGP_PahariEiJ_G0027075) #10	Gar1 (MGP_PahariEiJ_G0027076) #11	Cfi (MGP_PahariEiJ_G0027077) #12	Pla2g12a (MGP_PahariEiJ_G0027078) #13	Casp6 (MGP_PahariEiJ_G0027079) #14	Mcub (MGP_PahariEiJ_G0027080) #15	Sec24b (MGP_PahariEiJ_G0027081) #16	Col25a1 (MGP_PahariEiJ_G0027082) #18	Etnppl (MGP_PahariEiJ_G0027083) #19	Ostc (MGP_PahariEiJ_G0027084) #20	Rpl34 (MGP_PahariEiJ_G0027085) ##21	Lef1 (MGP_PahariEiJ_G0027086) #22	Hadh (MGP_PahariEiJ_G0027087) #23	Cyp2u1 (MGP_PahariEiJ_G0027088) #24	Sgms2 (MGP_PahariEiJ_G0027089) #25	Papss1 (MGP_PahariEiJ_G0027090) #26	Dkk2 (MGP_PahariEiJ_G0027091) #27	Gimd1 (MGP_PahariEiJ_G0027092) #28	Aimp1 (MGP_PahariEiJ_G0027093) #29	Tbck (MGP_PahariEiJ_G0027094) #30	Npnt (MGP_PahariEiJ_G0027095) #31	Gstcd (MGP_PahariEiJ_G0027096) #32	Ints12 (MGP_PahariEiJ_G0027097) #33	Arhgef38 (MGP_PahariEiJ_G0027098) #34	Ppa2 (MGP_PahariEiJ_G0027099) #35	Tet2 (MGP_PahariEiJ_G0027100) #36	Cxxc4 (MGP_PahariEiJ_G0027101) #37
Rat	MODERN SPECIES	11	Egf (ENSRNOG00000053979) #8	Lrit3 (ENSRNOG00000061097) #9	Rrh (ENSRNOG00000053349) #10	Gar1 (ENSRNOG00000061146) #11	Cfi (ENSRNOG00000053400) #12	Pla2g12a (ENSRNOG00000057470) #13	Casp6 (ENSRNOG00000052613) #14	Mcub (ENSRNOG00000009433) #15	Sec24b (ENSRNOG00000023373) #16	Col25a1 (ENSRNOG00000050706) #18	Etnppl (ENSRNOG00000045743) #19	Ostc (ENSRNOG00000023322) #20	Rpl34 (ENSRNOG00000016387) ##21	LOC108350290 (ENSRNOG00000069431)	AABR07013412.1 (ENSRNOG00000055035)	Lef1 (ENSRNOG00000010121) #22	Hadh (ENSRNOG00000010697) #23	Cyp2u1 (ENSRNOG00000011053) #24	Sgms2 (ENSRNOG00000011284) #25	Papss1 (ENSRNOG00000011311) #26	Dkk2 (ENSRNOG00000011360) #27	ENSRNOG00000066474	Gimd1 (ENSRNOG00000042721) #28	Aimp1 (ENSRNOG00000011384) #29	Tbck (ENSRNOG00000011454) #30	Npnt (ENSRNOG00000052873) #31	Gstcd (ENSRNOG00000011669) #32	Ints12 (ENSRNOG00000011844) #33	Arhgef38 (ENSRNOG00000023965) #34	Ppa2 (ENSRNOG00000012091) #35	Gpbp1l2 (ENSRNOG00000016336)
Upper Galilee mountains blind mole rat	MODERN SPECIES	465	ENSNGAG00000019288	Elovl6 (ENSNGAG00000023846) #7	ENSNGAG00000024138	Lrit3 (ENSNGAG00000002073) #9	Gar1 (ENSNGAG00000008268) #11	Cfi (ENSNGAG00000012073) #12	ENSNGAG00000019057	Pla2g12a (ENSNGAG00000019864) #13	Casp6 (ENSNGAG00000021834) #14	Mcub (ENSNGAG00000022593) #15	Sec24b (ENSNGAG00000023895) #16	Col25a1 (ENSNGAG00000001308) #18	Etnppl (ENSNGAG00000019931) #19	Ostc (ENSNGAG00000004125) #20	ENSNGAG00000021739 #21	Lef1 (ENSNGAG00000022789) #22	Hadh (ENSNGAG00000023972) #23	Cyp2u1 (ENSNGAG00000024149) #24	Sgms2 (ENSNGAG00000000978) #25
Lesser Egyptian jerboa	MODERN SPECIES	207										Col25a1 (ENSJJAG00000005590) #18	Etnppl (ENSJJAG00000010153) #19	Ostc (ENSJJAG00000010562) #20	Rpl34 (ENSJJAG00000015307) ##21	ENSJJAG00000011746	ENSJJAG00000015488	Lef1 (ENSJJAG00000016183) #22	Hadh (ENSJJAG00000016435) #23	Cyp2u1 (ENSJJAG00000016573) #24	Sgms2 (ENSJJAG00000016756) #25	Papss1 (ENSJJAG00000017108) #26	Dkk2 (ENSJJAG00000017735) #27
Lagomorpha	ANCESTRAL SPECIES	45	ENSGT00940000162789	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000160597
Rabbit	MODERN SPECIES	6	MCUB (ENSOCUG00000013751) #15	RRH (ENSOCUG00000034648) #10	GAR1 (ENSOCUG00000003901) #11	CFI (ENSOCUG00000003892) #12	CASP6 (ENSOCUG00000034509) #14	ENSOCUG00000036219	SEC24B (ENSOCUG00000001284) #16	ENSOCUG00000031162	ENSOCUG00000035839	COL25A1 (ENSOCUG00000000201) #18	ETNPPL (ENSOCUG00000015610) #19	ENSOCUG00000011056 #20	ENSOCUG00000029357 ##21	ENSOCUG00000021006	ENSOCUG00000024066	LEF1 (ENSOCUG00000010436) #22	HADH (ENSOCUG00000014271) #23	CYP2U1 (ENSOCUG00000002281) #24	SGMS2 (ENSOCUG00000009998) #25	PAPSS1 (ENSOCUG00000004622) #26	DKK2 (ENSOCUG00000001765) #27	GIMD1 (ENSOCUG00000026543) #28	AIMP1 (ENSOCUG00000002043) #29	TBCK (ENSOCUG00000008514) #30	ENSOCUG00000032155	NPNT (ENSOCUG00000012530) #31	GSTCD (ENSOCUG00000003884) #32	INTS12 (ENSOCUG00000011321) #33	ARHGEF38 (ENSOCUG00000027996) #34	PPA2 (ENSOCUG00000005941) #35	TET2 (ENSOCUG00000007098) #36
Pika	MODERN SPECIES	1604																LEF1 (ENSOPRG00000002250) #22	HADH (ENSOPRG00000002202) #23
Tree shrew	MODERN SPECIES	1885																LEF1 (ENSTBEG00000011345) #22
Primates	ANCESTRAL SPECIES	10	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140.n #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218.g #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Mas night monkey	MODERN SPECIES	922	ELOVL6 (ENSANAG00000032593) #7	EGF (ENSANAG00000027983) #8	LRIT3 (ENSANAG00000020446) #9	RRH (ENSANAG00000023867) #10	GAR1 (ENSANAG00000021608) #11	CFI (ENSANAG00000024666) #12	PLA2G12A (ENSANAG00000032035) #13	CASP6 (ENSANAG00000027635) #14	ENSANAG00000035982	ENSANAG00000027362 #15	SEC24B (ENSANAG00000030045) #16	COL25A1 (ENSANAG00000019852) #18	ETNPPL (ENSANAG00000020605) #19	ENSANAG00000024765 #20	ENSANAG00000026768 ##21	LEF1 (ENSANAG00000031040) #22	HADH (ENSANAG00000024891) #23	CYP2U1 (ENSANAG00000021010) #24	SGMS2 (ENSANAG00000031769) #25	PAPSS1 (ENSANAG00000030435) #26	DKK2 (ENSANAG00000036052) #27	GIMD1 (ENSANAG00000034671) #28	AIMP1 (ENSANAG00000033416) #29	TBCK (ENSANAG00000028672) #30	NPNT (ENSANAG00000019828) #31	GSTCD (ENSANAG00000037477) #32	ENSANAG00000030991	INTS12 (ENSANAG00000036142) #33	ARHGEF38 (ENSANAG00000032882) #34	PPA2 (ENSANAG00000026334) #35	TET2 (ENSANAG00000031123) #36
Cebidae	ANCESTRAL SPECIES	4	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140.n #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218.g #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00910000147632
Cebidae_a	ANCESTRAL SPECIES	21	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140.n #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218.g #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00910000147632
Capuchin	MODERN SPECIES	17	ELOVL6 (ENSCCAG00000037435) #7	EGF (ENSCCAG00000036796) #8	LRIT3 (ENSCCAG00000024280) #9	RRH (ENSCCAG00000029898) #10	GAR1 (ENSCCAG00000029372) #11	CFI (ENSCCAG00000024914) #12	PLA2G12A (ENSCCAG00000006887) #13	ENSCCAG00000032565 #14	MCUB (ENSCCAG00000025789) #15	SEC24B (ENSCCAG00000005066) #16	EIF3L (ENSCCAG00000034054)	COL25A1 (ENSCCAG00000027492) #18	ETNPPL (ENSCCAG00000030276) #19	OSTC (ENSCCAG00000023668) #20	ENSCCAG00000026254 #21	LEF1 (ENSCCAG00000023501) #22	HADH (ENSCCAG00000036897) #23	CYP2U1 (ENSCCAG00000026790) #24	SGMS2 (ENSCCAG00000030558) #25	PAPSS1 (ENSCCAG00000028083) #26	DKK2 (ENSCCAG00000034380) #27	ENSCCAG00000002308	GIMD1 (ENSCCAG00000008247) #28	AIMP1 (ENSCCAG00000031943) #29	ENSCCAG00000024667
Bolivian squirrel monkey	MODERN SPECIES	75	LRIT3 (ENSSBOG00000022516) #9	RRH (ENSSBOG00000003103) #10	GAR1 (ENSSBOG00000024785) #11	CFI (ENSSBOG00000035545) #12	PLA2G12A (ENSSBOG00000006929) #13	ENSSBOG00000025797 #14	MCUB (ENSSBOG00000026239) #15	SEC24B (ENSSBOG00000032106) #16	ENSSBOG00000024883	COL25A1 (ENSSBOG00000025557) #18	ENSSBOG00000035051	ETNPPL (ENSSBOG00000036171) #19	ENSSBOG00000036162 #20	ENSSBOG00000033335	ENSSBOG00000026498 ##21	LEF1 (ENSSBOG00000028826) #22	HADH (ENSSBOG00000021987) #23	ENSSBOG00000015235	CYP2U1 (ENSSBOG00000030554) #24	SGMS2 (ENSSBOG00000025320) #25	PAPSS1 (ENSSBOG00000002114) #26	ENSSBOG00000024743	DKK2 (ENSSBOG00000019910) #27	GIMD1 (ENSSBOG00000033555) #28	AIMP1 (ENSSBOG00000035710) #29	TBCK (ENSSBOG00000031928) #30	NPNT (ENSSBOG00000003943) #31	GSTCD (ENSSBOG00000028318) #32	ENSSBOG00000026514 #33	ARHGEF38 (ENSSBOG00000030065) #34	ENSSBOG00000025203 #34
Marmoset	MODERN SPECIES	15	LRIT3 (ENSCJAG00000004015) #9	RRH (ENSCJAG00000004028) #10	GAR1 (ENSCJAG00000082261) #11	CFI (ENSCJAG00000004249) #12	PLA2G12A (ENSCJAG00000085363) #13	CASP6 (ENSCJAG00000016170) #14	MCUB (ENSCJAG00000016158) #15	SEC24B (ENSCJAG00000016082) #16	COL25A1 (ENSCJAG00000016026) #18	ENSCJAG00000066361	ETNPPL (ENSCJAG00000016009) #19	ENSCJAG00000080504 #20	ENSCJAG00000053141 #21	ENSCJAG00000070564	ENSCJAG00000086893	LEF1 (ENSCJAG00000015947) #22	ENSCJAG00000082049	CYP2U1 (ENSCJAG00000019545) #24	HADH (ENSCJAG00000015938) #23	ENSCJAG00000052711	SGMS2 (ENSCJAG00000015928) #25	ENSCJAG00000079677	PAPSS1 (ENSCJAG00000015905) #26	ENSCJAG00000070747	ENSCJAG00000065541	DKK2 (ENSCJAG00000057432) #27	ENSCJAG00000079824	GIMD1 (ENSCJAG00000015900) #28	AIMP1 (ENSCJAG00000015885) #29	TBCK (ENSCJAG00000015822) #30	ENSCJAG00000081165
Catarrhini	ANCESTRAL SPECIES	14	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Hominoidea	ANCESTRAL SPECIES	10	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Gibbon	MODERN SPECIES	24	COMMD3 (ENSNLEG00000030814)	BMI1 (ENSNLEG00000012850)	SPAG6 (ENSNLEG00000012859)	PIP4K2A (ENSNLEG00000012884)	ARMC3 (ENSNLEG00000012885)	MSRB2 (ENSNLEG00000012892)	ENSNLEG00000002241	PTF1A (ENSNLEG00000012897)	C10orf67 (ENSNLEG00000012904)	ENSNLEG00000031365	ENSNLEG00000033361	COL25A1 (ENSNLEG00000012906) #18	ETNPPL (ENSNLEG00000012907) #19	ENSNLEG00000012929 #20	ENSNLEG00000012934 ##21	LEF1 (ENSNLEG00000012942) #22	ENSNLEG00000012951 #23	ENSNLEG00000012977 #24	SGMS2 (ENSNLEG00000012986) #25	PAPSS1 (ENSNLEG00000034537) #26	ENSNLEG00000031216	DKK2 (ENSNLEG00000030139) #27	GIMD1 (ENSNLEG00000013029) #28	AIMP1 (ENSNLEG00000033706) #29	TBCK (ENSNLEG00000013047) #30	NPNT (ENSNLEG00000013090) #31	GSTCD (ENSNLEG00000013117) #32	INTS12 (ENSNLEG00000013144) #33	ENSNLEG00000034939 #34	ENSNLEG00000013162 #34	ENSNLEG00000018619
Hominidae	ANCESTRAL SPECIES	12	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Orangutan	MODERN SPECIES	17	EGF (ENSPPYG00000014999) #8	LRIT3 (ENSPPYG00000014998) #9	RRH (ENSPPYG00000014997) #10	GAR1 (ENSPPYG00000014996) #11	CFI (ENSPPYG00000014995) #12	PLA2G12A (ENSPPYG00000014994) #13	CASP6 (ENSPPYG00000014993) #14	MCUB (ENSPPYG00000037615) #15	SEC24B (ENSPPYG00000029772) #16	ENSPPYG00000039944	COL25A1 (ENSPPYG00000014990) #18	ETNPPL (ENSPPYG00000014989) #19	ENSPPYG00000030600 #20	ENSPPYG00000014988 ##21	ENSPPYG00000032263	LEF1 (ENSPPYG00000014987) #22	ENSPPYG00000014986 #23	CYP2U1 (ENSPPYG00000014985) #24	SGMS2 (ENSPPYG00000014984) #25	PAPSS1 (ENSPPYG00000014983) #26	DKK2 (ENSPPYG00000014982) #27	GIMD1 (ENSPPYG00000035934) #28	AIMP1 (ENSPPYG00000014981) #29	TBCK (ENSPPYG00000014980) #30	NPNT (ENSPPYG00000014979) #31	GSTCD (ENSPPYG00000014978) #32	INTS12 (ENSPPYG00000014977) #33	ENSPPYG00000014976 #34	ENSPPYG00000016915	PPA2 (ENSPPYG00000014975) #35	TET2 (ENSPPYG00000014974) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00940000154037.A.n.b.a
Gorilla	MODERN SPECIES	17	ELOVL6 (ENSGGOG00000000221) #7	EGF (ENSGGOG00000005808) #8	LRIT3 (ENSGGOG00000001382) #9	RRH (ENSGGOG00000026289) #10	GAR1 (ENSGGOG00000008681) #11	CFI (ENSGGOG00000003371) #12	PLA2G12A (ENSGGOG00000044178) #13	CASP6 (ENSGGOG00000026344) #14	ENSGGOG00000038002	ENSGGOG00000041678 #15	SEC24B (ENSGGOG00000006806) #16	COL25A1 (ENSGGOG00000005574) #18	ETNPPL (ENSGGOG00000012323) #19	ENSGGOG00000026873 #20	ENSGGOG00000007650 ##21	LEF1 (ENSGGOG00000010692) #22	ENSGGOG00000004423 #23	CYP2U1 (ENSGGOG00000014716) #24	SGMS2 (ENSGGOG00000012598) #25	PAPSS1 (ENSGGOG00000014736) #26	ENSGGOG00000011380	DKK2 (ENSGGOG00000027525) #27	GIMD1 (ENSGGOG00000024079) #28	AIMP1 (ENSGGOG00000004226) #29	TBCK (ENSGGOG00000005116) #30	NPNT (ENSGGOG00000013715) #31	GSTCD (ENSGGOG00000017102) #32	INTS12 (ENSGGOG00000013501) #33	ENSGGOG00000027331 #34	ENSGGOG00000011388 #34	ENSGGOG00000040418
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00940000154037.A.n.b.a
Human	MODERN SPECIES	16	ELOVL6 (ENSG00000170522) #7	EGF (ENSG00000138798) #8	LRIT3 (ENSG00000183423) #9	RRH (ENSG00000180245) #10	GAR1 (ENSG00000109534) #11	CFI (ENSG00000205403) #12	ENSG00000285330	PLA2G12A (ENSG00000123739) #13	CASP6 (ENSG00000138794) #14	MCUB (ENSG00000005059) #15	SEC24B (ENSG00000138802) #16	COL25A1 (ENSG00000188517) #18	ETNPPL (ENSG00000164089) #19	OSTC (ENSG00000198856) #20	RPL34 (ENSG00000109475) ##21	LEF1 (ENSG00000138795) #22	HADH (ENSG00000138796) #23	CYP2U1 (ENSG00000155016) #24	SGMS2 (ENSG00000164023) #25	PAPSS1 (ENSG00000138801) #26	DKK2 (ENSG00000155011) #27	GIMD1 (ENSG00000250298) #28	AIMP1 (ENSG00000164022) #29	TBCK (ENSG00000145348) #30	NPNT (ENSG00000168743) #31	GSTCD (ENSG00000138780) #32	INTS12 (ENSG00000138785) #33	ARHGEF38 (ENSG00000236699) #34	PPA2 (ENSG00000138777) #35	TET2 (ENSG00000168769) #36	CXXC4 (ENSG00000168772) #37
Pan	ANCESTRAL SPECIES	7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00940000154891.h	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00940000154037.A.n.b.a
Bonobo	MODERN SPECIES	17	EGF (ENSPPAG00000001225) #8	LRIT3 (ENSPPAG00000043621) #9	RRH (ENSPPAG00000041672) #10	GAR1 (ENSPPAG00000014081) #11	CFI (ENSPPAG00000039592) #12	PLA2G12A (ENSPPAG00000029221) #13	CASP6 (ENSPPAG00000036967) #14	MCUB (ENSPPAG00000029717) #15	ENSPPAG00000033317	SEC24B (ENSPPAG00000037815) #16	ENSPPAG00000034006	COL25A1 (ENSPPAG00000027300) #18	ETNPPL (ENSPPAG00000031593) #19	ENSPPAG00000043858 #20	ENSPPAG00000036097 ##21	LEF1 (ENSPPAG00000042910) #22	ENSPPAG00000034253 #23	CYP2U1 (ENSPPAG00000043345) #24	SGMS2 (ENSPPAG00000041148) #25	PAPSS1 (ENSPPAG00000031578) #26	ENSPPAG00000042562	DKK2 (ENSPPAG00000038306) #27	GIMD1 (ENSPPAG00000034688) #28	AIMP1 (ENSPPAG00000038355) #29	TBCK (ENSPPAG00000043246) #30	NPNT (ENSPPAG00000034385) #31	GSTCD (ENSPPAG00000039286) #32	INTS12 (ENSPPAG00000040304) #33	ENSPPAG00000027311 #34	ENSPPAG00000037290 #34	ENSPPAG00000034893
Chimpanzee	MODERN SPECIES	17	LRIT3 (ENSPTRG00000016366) #9	RRH (ENSPTRG00000016365) #10	GAR1 (ENSPTRG00000016364) #11	CFI (ENSPTRG00000031127) #12	PLA2G12A (ENSPTRG00000044543) #13	CASP6 (ENSPTRG00000046752) #14	ENSPTRG00000050870	MCUB (ENSPTRG00000016360) #15	ENSPTRG00000043489	SEC24B (ENSPTRG00000016359) #16	ENSPTRG00000052216	COL25A1 (ENSPTRG00000016356) #18	ETNPPL (ENSPTRG00000016355) #19	OSTC (ENSPTRG00000024222) #20	RPL34 (ENSPTRG00000016353) ##21	LEF1 (ENSPTRG00000016352) #22	HADH (ENSPTRG00000016351) #23	CYP2U1 (ENSPTRG00000016349) #24	SGMS2 (ENSPTRG00000048675) #25	PAPSS1 (ENSPTRG00000016347) #26	ENSPTRG00000040502	DKK2 (ENSPTRG00000016346) #27	GIMD1 (ENSPTRG00000049713) #28	AIMP1 (ENSPTRG00000016345) #29	TBCK (ENSPTRG00000016344) #30	NPNT (ENSPTRG00000016343) #31	GSTCD (ENSPTRG00000016341) #32	INTS12 (ENSPTRG00000016340) #33	ARHGEF38 (ENSPTRG00000016338) #34	ENSPTRG00000045122 #34	ENSPTRG00000047902
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000012692.e	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.b.b ##21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00390000017004.a.a #35
Rhinopithecus	ANCESTRAL SPECIES	640																ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870
Black snub-nosed monkey	MODERN SPECIES	1609																LEF1 (ENSRBIG00000028592) #22	HADH (ENSRBIG00000002438) #23	CYP2U1 (ENSRBIG00000034596) #24	SGMS2 (ENSRBIG00000037200) #25	PAPSS1 (ENSRBIG00000033478) #26	ENSRBIG00000007329
Golden snub-nosed monkey	MODERN SPECIES	1723																LEF1 (ENSRROG00000040149) #22	ENSRROG00000036517	HADH (ENSRROG00000035178) #23	CYP2U1 (ENSRROG00000043971) #24	SGMS2 (ENSRROG00000038614) #25	PAPSS1 (ENSRROG00000041405) #26
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT01050000244965.b #7	ENSGT00390000012692.e	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00390000017004.a.a #35
Vervet Monkey	MODERN SPECIES	26	PITX2 (ENSCSAG00000003844)	ENPEP (ENSCSAG00000003888)	ELOVL6 (ENSCSAG00000003910) #7	ENSCSAG00000000402	EGF (ENSCSAG00000003916) #8	LRIT3 (ENSCSAG00000003918) #9	RRH (ENSCSAG00000003920) #10	GAR1 (ENSCSAG00000003922) #11	CFI (ENSCSAG00000003926) #12	PLA2G12A (ENSCSAG00000003928) #13	CASP6 (ENSCSAG00000003933) #14	MCUB (ENSCSAG00000003935) #15	SEC24B (ENSCSAG00000003940) #16	COL25A1 (ENSCSAG00000003955) #18	ETNPPL (ENSCSAG00000003965) #19	LEF1 (ENSCSAG00000003970) #22	HADH (ENSCSAG00000003972) #23	CYP2U1 (ENSCSAG00000003974) #24	SGMS2 (ENSCSAG00000003975) #25	ENSCSAG00000000403	PAPSS1 (ENSCSAG00000003977) #26	DKK2 (ENSCSAG00000003978) #27	GIMD1 (ENSCSAG00000003981) #28	AIMP1 (ENSCSAG00000003982) #29	TBCK (ENSCSAG00000003984) #30	NPNT (ENSCSAG00000003989) #31	GSTCD (ENSCSAG00000003991) #32	INTS12 (ENSCSAG00000003995) #33	ENSCSAG00000003997 #34	ENSCSAG00000004002 #34	PPA2 (ENSCSAG00000004005) #35
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00390000012692.e	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.a.a	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00390000017004.a.a #35
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00390000012692.e	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.a.a	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Olive baboon	MODERN SPECIES	13	PITX2 (ENSPANG00000025865)	ENPEP (ENSPANG00000004936)	ELOVL6 (ENSPANG00000009911) #7	EGF (ENSPANG00000006015) #8	ENSPANG00000002291	LRIT3 (ENSPANG00000018827) #9	GAR1 (ENSPANG00000000639) #11	CFI (ENSPANG00000019215) #12	PLA2G12A (ENSPANG00000035993) #13	CASP6 (ENSPANG00000020178) #14	SEC24B (ENSPANG00000018888) #16	COL25A1 (ENSPANG00000007137) #18	ETNPPL (ENSPANG00000026027) #19	ENSPANG00000016693 #20	ENSPANG00000030212 ##21	LEF1 (ENSPANG00000020598) #22	HADH (ENSPANG00000009529) #23	CYP2U1 (ENSPANG00000011417) #24	SGMS2 (ENSPANG00000024436) #25	PAPSS1 (ENSPANG00000015660) #26	DKK2 (ENSPANG00000040092) #27	GIMD1 (ENSPANG00000046883) #28	AIMP1 (ENSPANG00000024758) #29	ENSPANG00000051168	TBCK (ENSPANG00000010441) #30	NPNT (ENSPANG00000012406) #31	GSTCD (ENSPANG00000015065) #32	INTS12 (ENSPANG00000005635) #33	ARHGEF38 (ENSPANG00000033804) #34	ENSPANG00000044802	PPA2 (ENSPANG00000001031) #35
Cercopithecinae_d	ANCESTRAL SPECIES	62	ENSGT00390000012692.e	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.a.a	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Drill	MODERN SPECIES	1024												COL25A1 (ENSMLEG00000031352) #18	ETNPPL (ENSMLEG00000029331) #19	ENSMLEG00000037144 #20	RPL34 (ENSMLEG00000037912) ##21	LEF1 (ENSMLEG00000027242) #22	HADH (ENSMLEG00000028040) #23	CYP2U1 (ENSMLEG00000041080) #24	SGMS2 (ENSMLEG00000029374) #25	PAPSS1 (ENSMLEG00000042317) #26	ENSMLEG00000003849	DKK2 (ENSMLEG00000041922) #27
Sooty mangabey	MODERN SPECIES	348	ENSCATG00000045152	EGF (ENSCATG00000041287) #8	LRIT3 (ENSCATG00000040147) #9	RRH (ENSCATG00000029911) #10	GAR1 (ENSCATG00000021854) #11	CFI (ENSCATG00000036463) #12	PLA2G12A (ENSCATG00000037790) #13	CASP6 (ENSCATG00000033766) #14	MCUB (ENSCATG00000033302) #15	SEC24B (ENSCATG00000032434) #16	ENSCATG00000031369	COL25A1 (ENSCATG00000031315) #18	ETNPPL (ENSCATG00000032306) #19	ENSCATG00000035272 #20	ENSCATG00000042942 #21	LEF1 (ENSCATG00000035015) #22	HADH (ENSCATG00000040474) #23	CYP2U1 (ENSCATG00000035461) #24	SGMS2 (ENSCATG00000044120) #25	PAPSS1 (ENSCATG00000028277) #26	ENSCATG00000043463	DKK2 (ENSCATG00000042474) #27	GIMD1 (ENSCATG00000039819) #28	AIMP1 (ENSCATG00000034569) #29	TBCK (ENSCATG00000038155) #30	NPNT (ENSCATG00000029952) #31	GSTCD (ENSCATG00000010872) #32	INTS12 (ENSCATG00000029222) #33	ARHGEF38 (ENSCATG00000043411) #34	ENSCATG00000028897	PPA2 (ENSCATG00000016898) #35
Macaca	ANCESTRAL SPECIES	18	ENSGT00390000012692.e	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.a.a	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000008128.d	ENSGT00390000017004.a.a #35
Pig-tailed macaque	MODERN SPECIES	126	ENSMNEG00000044470	EGF (ENSMNEG00000033504) #8	LRIT3 (ENSMNEG00000044383) #9	RRH (ENSMNEG00000041255) #10	GAR1 (ENSMNEG00000042594) #11	CFI (ENSMNEG00000033022) #12	PLA2G12A (ENSMNEG00000035471) #13	CASP6 (ENSMNEG00000028940) #14	MCUB (ENSMNEG00000044864) #15	SEC24B (ENSMNEG00000039207) #16	ENSMNEG00000040914	COL25A1 (ENSMNEG00000032070) #18	ETNPPL (ENSMNEG00000040127) #19	ENSMNEG00000030618 #20	ENSMNEG00000042248 #21	LEF1 (ENSMNEG00000043505) #22	HADH (ENSMNEG00000031684) #23	CYP2U1 (ENSMNEG00000030586) #24	SGMS2 (ENSMNEG00000034744) #25	PAPSS1 (ENSMNEG00000030623) #26	ENSMNEG00000044748	ENSMNEG00000037880	DKK2 (ENSMNEG00000034817) #27	GIMD1 (ENSMNEG00000032315) #28	AIMP1 (ENSMNEG00000030181) #29	TBCK (ENSMNEG00000044135) #30	NPNT (ENSMNEG00000030807) #31	GSTCD (ENSMNEG00000032450) #32	INTS12 (ENSMNEG00000043289) #33	ARHGEF38 (ENSMNEG00000029734) #34	ENSMNEG00000028407
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.i #11	ENSGT00930000151042 #12	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000153425.a.a.a.a.a	ENSGT00940000159823 #18	ENSGT00940000166143.A.a.a.a.a	ENSGT00940000157910 #19	ENSGT00390000001376.ab.b.b #20	ENSGT00390000008294.e.b.a.b.a.b ##21	ENSGT01030000240089	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164870	ENSGT00980000202103.B.a.a.a	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Crab-eating macaque	MODERN SPECIES	15	LRIT3 (ENSMFAG00000033675) #9	RRH (ENSMFAG00000006731) #10	GAR1 (ENSMFAG00000024592) #11	CFI (ENSMFAG00000032258) #12	CASP6 (ENSMFAG00000034038) #14	MCUB (ENSMFAG00000031082) #15	SEC24B (ENSMFAG00000038799) #16	ENSMFAG00000031126	ENSMFAG00000060894	COL25A1 (ENSMFAG00000031895) #18	ENSMFAG00000062873	ETNPPL (ENSMFAG00000031575) #19	ENSMFAG00000034553 #20	ENSMFAG00000034368 ##21	ENSMFAG00000062885	LEF1 (ENSMFAG00000037201) #22	ENSMFAG00000002923	HADH (ENSMFAG00000033488) #23	CYP2U1 (ENSMFAG00000003841) #24	SGMS2 (ENSMFAG00000041579) #25	PAPSS1 (ENSMFAG00000032785) #26	ENSMFAG00000003949	ENSMFAG00000054818	DKK2 (ENSMFAG00000032422) #27	GIMD1 (ENSMFAG00000007005) #28	AIMP1 (ENSMFAG00000044822) #29	TBCK (ENSMFAG00000034054) #30	NPNT (ENSMFAG00000045955) #31	GSTCD (ENSMFAG00000000581) #32	INTS12 (ENSMFAG00000042815) #33	ARHGEF38 (ENSMFAG00000041172) #34
Rhesus	MODERN SPECIES	15	EGF (ENSMMUG00000010043) #8	LRIT3 (ENSMMUG00000022956) #9	RRH (ENSMMUG00000021223) #10	GAR1 (ENSMMUG00000021225) #11	CFI (ENSMMUG00000021226) #12	CASP6 (ENSMMUG00000008174) #14	MCUB (ENSMMUG00000052933) #15	SEC24B (ENSMMUG00000023240) #16	COL25A1 (ENSMMUG00000017703) #18	ENSMMUG00000051110	ETNPPL (ENSMMUG00000011903) #19	OSTC (ENSMMUG00000011902) #20	RPL34 (ENSMMUG00000052609) ##21	ENSMMUG00000060432	ENSMMUG00000009066	LEF1 (ENSMMUG00000023256) #22	HADH (ENSMMUG00000023254) #23	CYP2U1 (ENSMMUG00000058349) #24	SGMS2 (ENSMMUG00000017834) #25	PAPSS1 (ENSMMUG00000019907) #26	ENSMMUG00000058075	ENSMMUG00000063746	DKK2 (ENSMMUG00000051654) #27	GIMD1 (ENSMMUG00000047132) #28	AIMP1 (ENSMMUG00000015759) #29	TBCK (ENSMMUG00000015756) #30	NPNT (ENSMMUG00000023428) #31	GSTCD (ENSMMUG00000018811) #32	INTS12 (ENSMMUG00000011722) #33	ARHGEF38 (ENSMMUG00000010941) #34	PPA2 (ENSMMUG00000017004) #35
Tarsier	MODERN SPECIES	2563																LEF1 (ENSTSYG00000003979) #22	ENSTSYG00000030634	HADH (ENSTSYG00000011033) #23
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.z #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.z #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Mouse lemur	MODERN SPECIES	20	ELOVL6 (ENSMICG00000045952) #7	LRIT3 (ENSMICG00000036410) #9	RRH (ENSMICG00000038685) #10	GAR1 (ENSMICG00000003326) #11	CFI (ENSMICG00000003323) #12	PLA2G12A (ENSMICG00000010304) #13	CASP6 (ENSMICG00000010297) #14	ENSMICG00000037926 #15	SEC24B (ENSMICG00000010277) #16	ENSMICG00000036525	COL25A1 (ENSMICG00000002737) #18	ENSMICG00000037629	ENSMICG00000002187 #19	OSTC (ENSMICG00000002182) #20	ENSMICG00000041882 #21	LEF1 (ENSMICG00000012833) #22	HADH (ENSMICG00000012822) #23	CYP2U1 (ENSMICG00000012817) #24	SGMS2 (ENSMICG00000008740) #25	PAPSS1 (ENSMICG00000016262) #26	ENSMICG00000017692	DKK2 (ENSMICG00000027157) #27	GIMD1 (ENSMICG00000045116) #28	AIMP1 (ENSMICG00000010202) #29	TBCK (ENSMICG00000010786) #30	NPNT (ENSMICG00000010776) #31	GSTCD (ENSMICG00000030887) #32	INTS12 (ENSMICG00000010760) #33	ENSMICG00000010754 #34	ENSMICG00000047313 #34	ENSMICG00000013570 #35
Lemuriformes_a	ANCESTRAL SPECIES	108	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.z #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Coquerels sifaka	MODERN SPECIES	612	ENPEP (ENSPCOG00000023964)	ENSPCOG00000010114	ELOVL6 (ENSPCOG00000017024) #7	EGF (ENSPCOG00000019019) #8	LRIT3 (ENSPCOG00000023561) #9	GAR1 (ENSPCOG00000027049) #11	ENSPCOG00000015799 #12	ENSPCOG00000025332 #13	CASP6 (ENSPCOG00000017154) #14	MCUB (ENSPCOG00000021218) #15	SEC24B (ENSPCOG00000015907) #16	COL25A1 (ENSPCOG00000016653) #18	ETNPPL (ENSPCOG00000007840) #19	OSTC (ENSPCOG00000014109) #20	ENSPCOG00000010384 ##21	LEF1 (ENSPCOG00000012815) #22	HADH (ENSPCOG00000010610) #23	CYP2U1 (ENSPCOG00000027221) #24	SGMS2 (ENSPCOG00000002586) #25	PAPSS1 (ENSPCOG00000022421) #26	DKK2 (ENSPCOG00000016835) #27	GIMD1 (ENSPCOG00000012757) #28	AIMP1 (ENSPCOG00000001426) #29	TBCK (ENSPCOG00000017320) #30	NPNT (ENSPCOG00000028528) #31	GSTCD (ENSPCOG00000010589) #32	INTS12 (ENSPCOG00000018476) #33	ENSPCOG00000028147 #34	ENSPCOG00000021618 #34	ENSPCOG00000016895 #35	TET2 (ENSPCOG00000024542) #36
Greater bamboo lemur	MODERN SPECIES	41	ENPEP (ENSPSMG00000009877)	ELOVL6 (ENSPSMG00000009746) #7	EGF (ENSPSMG00000009712) #8	LRIT3 (ENSPSMG00000009629) #9	RRH (ENSPSMG00000009623) #10	GAR1 (ENSPSMG00000009612) #11	ENSPSMG00000009600 #12	PLA2G12A (ENSPSMG00000009589) #13	CASP6 (ENSPSMG00000009580) #14	MCUB (ENSPSMG00000009554) #15	SEC24B (ENSPSMG00000009514) #16	ETNPPL (ENSPSMG00000009391) #19	COL25A1 (ENSPSMG00000009240) #18	OSTC (ENSPSMG00000009069) #20	ENSPSMG00000009043 #21	LEF1 (ENSPSMG00000009019) #22	HADH (ENSPSMG00000008870) #23	CYP2U1 (ENSPSMG00000008757) #24	ENSPSMG00000008741 #25	PAPSS1 (ENSPSMG00000008731) #26	DKK2 (ENSPSMG00000008696) #27	AIMP1 (ENSPSMG00000008692) #29	TBCK (ENSPSMG00000008659) #30	NPNT (ENSPSMG00000008414) #31	GSTCD (ENSPSMG00000008240) #32	INTS12 (ENSPSMG00000008195) #33	ENSPSMG00000008160 #34	ENSPSMG00000008154 #34	PPA2 (ENSPSMG00000008130) #35	TET2 (ENSPSMG00000008057) #36	ENSPSMG00000008033 #37
Bushbaby	MODERN SPECIES	218												COL25A1 (ENSOGAG00000006779) #18	ETNPPL (ENSOGAG00000006777) #19	OSTC (ENSOGAG00000033684) #20	ENSOGAG00000006774 ##21	LEF1 (ENSOGAG00000004368) #22	HADH (ENSOGAG00000004364) #23	CYP2U1 (ENSOGAG00000015840) #24	SGMS2 (ENSOGAG00000004363) #25	PAPSS1 (ENSOGAG00000013080) #26	DKK2 (ENSOGAG00000000287) #27	GIMD1 (ENSOGAG00000026809) #28	AIMP1 (ENSOGAG00000002089) #29	TBCK (ENSOGAG00000005510) #30	NPNT (ENSOGAG00000005507) #31	GSTCD (ENSOGAG00000005503) #32	INTS12 (ENSOGAG00000005500) #33	ARHGEF38 (ENSOGAG00000005499) #34	PPA2 (ENSOGAG00000003361) #35	TET2 (ENSOGAG00000003213) #36	CXXC4 (ENSOGAG00000026362) #37
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159660 #22
Common shrew	MODERN SPECIES	2768																LEF1 (ENSSARG00000012174) #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.a ##21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Suina	ANCESTRAL SPECIES	22	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Chacoan peccary	MODERN SPECIES	117										MCUB (ENSCWAG00000015844) #15	SEC24B (ENSCWAG00000015663) #16	COL25A1 (ENSCWAG00000014445) #18	ETNPPL (ENSCWAG00000014038) #19	OSTC (ENSCWAG00000013983) #20	ENSCWAG00000013949 #21	LEF1 (ENSCWAG00000013569) #22	HADH (ENSCWAG00000013471) #23	CYP2U1 (ENSCWAG00000013408) #24	SGMS2 (ENSCWAG00000013366) #25	PAPSS1 (ENSCWAG00000013320) #26	DKK2 (ENSCWAG00000013256) #27	GIMD1 (ENSCWAG00000013232) #28	AIMP1 (ENSCWAG00000013148) #29	TBCK (ENSCWAG00000013024) #30	NPNT (ENSCWAG00000012655) #31	GSTCD (ENSCWAG00000012515) #32	INTS12 (ENSCWAG00000012476) #33	ENSCWAG00000012382 #34	ENSCWAG00000012339 #34	PPA2 (ENSCWAG00000011521) #35	TET2 (ENSCWAG00000011335) #36
Pig	MODERN SPECIES	16	ENSSSCG00000042004	EGF (ENSSSCG00000009134) #8	LRIT3 (ENSSSCG00000009135) #9	RRH (ENSSSCG00000009136) #10	GAR1 (ENSSSCG00000009137) #11	CFI (ENSSSCG00000009138) #12	PLA2G12A (ENSSSCG00000053405) #13	CASP6 (ENSSSCG00000009140) #14	MCUB (ENSSSCG00000009141) #15	SEC24B (ENSSSCG00000009142) #16	COL25A1 (ENSSSCG00000039813) #18	ETNPPL (ENSSSCG00000009144) #19	OSTC (ENSSSCG00000009145) #20	ENSSSCG00000009146 #21	ENSSSCG00000044193	LEF1 (ENSSSCG00000009148) #22	HADH (ENSSSCG00000009150) #23	CYP2U1 (ENSSSCG00000009151) #24	SGMS2 (ENSSSCG00000009152) #25	PAPSS1 (ENSSSCG00000031901) #26	DKK2 (ENSSSCG00000032094) #27	GIMD1 (ENSSSCG00000039563) #28	AIMP1 (ENSSSCG00000024168) #29	TBCK (ENSSSCG00000021784) #30	NPNT (ENSSSCG00000038801) #31	GSTCD (ENSSSCG00000023548) #32	INTS12 (ENSSSCG00000030617) #33	ARHGEF38 (ENSSSCG00000021764) #34	PPA2 (ENSSSCG00000022788) #35	ENSSSCG00000009157 #36	CXXC4 (ENSSSCG00000062602) #37
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.a ##21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Camelidae	ANCESTRAL SPECIES	20	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.a ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Alpaca	MODERN SPECIES	1561													ETNPPL (ENSVPAG00000005955) #19	OSTC (ENSVPAG00000005954) #20	ENSVPAG00000005953 ##21	LEF1 (ENSVPAG00000005950) #22	ENSVPAG00000005948	CYP2U1 (ENSVPAG00000005946) #24	SGMS2 (ENSVPAG00000005945) #25
Arabian camel	MODERN SPECIES	11	ENPEP (ENSCDRG00005008426)	ELOVL6 (ENSCDRG00005008682) #7	EGF (ENSCDRG00005008742) #8	LRIT3 (ENSCDRG00005009270) #9	RRH (ENSCDRG00005009398) #10	CFI (ENSCDRG00005009663) #12	PLA2G12A (ENSCDRG00005009961) #13	CASP6 (ENSCDRG00005010019) #14	MCUB (ENSCDRG00005010226) #15	SEC24B (ENSCDRG00005010364) #16	COL25A1 (ENSCDRG00005010697) #18	ETNPPL (ENSCDRG00005011685) #19	OSTC (ENSCDRG00005011891) #20	ENSCDRG00005011976 ##21	ENSCDRG00005012022	LEF1 (ENSCDRG00005012067) #22	HADH (ENSCDRG00005012655) #23	CYP2U1 (ENSCDRG00005012785) #24	SGMS2 (ENSCDRG00005012842) #25	PAPSS1 (ENSCDRG00005012902) #26	DKK2 (ENSCDRG00005012999) #27	GIMD1 (ENSCDRG00005013046) #28	AIMP1 (ENSCDRG00005013076) #29	TBCK (ENSCDRG00005013156) #30	NPNT (ENSCDRG00005013395) #31	GSTCD (ENSCDRG00005014076) #32	INTS12 (ENSCDRG00005014189) #33	ARHGEF38 (ENSCDRG00005014226) #34	ENSCDRG00005014335 #34	PPA2 (ENSCDRG00005014375) #35	TET2 (ENSCDRG00005014485) #36
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Cetacea	ANCESTRAL SPECIES	12	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT01010000228945	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.k #35	ENSGT00940000160003 #36
Odontoceti	ANCESTRAL SPECIES	11	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00730000111029.h	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT01010000228945	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.k #35	ENSGT00940000160003 #36
Odontoceti_a	ANCESTRAL SPECIES	22	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140.a #14	ENSGT00940000158059 #15	ENSGT00730000111029.h	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT01010000228945	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.k #35	ENSGT00940000160003 #36
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140.a #14	ENSGT00940000158059 #15	ENSGT00730000111029.h	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000015889.o.b.a.b	ENSGT00610000087446.e	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT01010000228945	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140.a #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000015889.o.b.a.b	ENSGT00610000087446.e	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT01010000228945	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Beluga whale	MODERN SPECIES	77	ENSDLEG00000017447	PITX2 (ENSDLEG00000017372)	ENPEP (ENSDLEG00000017322)	ELOVL6 (ENSDLEG00000017291) #7	EGF (ENSDLEG00000017238) #8	LRIT3 (ENSDLEG00000017230) #9	RRH (ENSDLEG00000017217) #10	GAR1 (ENSDLEG00000017209) #11	CFI (ENSDLEG00000017184) #12	CASP6 (ENSDLEG00000017156) #14	MCUB (ENSDLEG00000017145) #15	SEC24B (ENSDLEG00000017023) #16	ETNPPL (ENSDLEG00000016984) #19	OSTC (ENSDLEG00000016962) #20	RPL34 (ENSDLEG00000016949) ##21	LEF1 (ENSDLEG00000016934) #22	HADH (ENSDLEG00000016907) #23	CYP2U1 (ENSDLEG00000016894) #24	SGMS2 (ENSDLEG00000016878) #25	ENSDLEG00000016862	PIGY (ENSDLEG00000016856)	PAPSS1 (ENSDLEG00000016819) #26	DKK2 (ENSDLEG00000016802) #27	ENSDLEG00000016794	GIMD1 (ENSDLEG00000016786) #28	AIMP1 (ENSDLEG00000016772) #29	TBCK (ENSDLEG00000016743) #30	NPNT (ENSDLEG00000016711) #31	GSTCD (ENSDLEG00000016682) #32	INTS12 (ENSDLEG00000016671) #33	ARHGEF38 (ENSDLEG00000016642) #34
Narwhal	MODERN SPECIES	307	ELOVL6 (ENSMMNG00015010678) #7	EGF (ENSMMNG00015010614) #8	LRIT3 (ENSMMNG00015010568) #9	RRH (ENSMMNG00015010550) #10	GAR1 (ENSMMNG00015010535) #11	CFI (ENSMMNG00015010505) #12	PLA2G12A (ENSMMNG00015010490) #13	CASP6 (ENSMMNG00015010448) #14	MCUB (ENSMMNG00015010413) #15	ENSMMNG00015010407	SEC24B (ENSMMNG00015010228) #16	COL25A1 (ENSMMNG00015009795) #18	ETNPPL (ENSMMNG00015009644) #19	ENSMMNG00015009632 #20	ENSMMNG00015009622 ##21	LEF1 (ENSMMNG00015009575) #22	HADH (ENSMMNG00015009539) #23	CYP2U1 (ENSMMNG00015009524) #24	SGMS2 (ENSMMNG00015009514) #25	ENSMMNG00015009508	PIGY (ENSMMNG00015009502)	PAPSS1 (ENSMMNG00015009486) #26	DKK2 (ENSMMNG00015009459) #27	GIMD1 (ENSMMNG00015009450) #28	AIMP1 (ENSMMNG00015009440) #29	TBCK (ENSMMNG00015009409) #30	NPNT (ENSMMNG00015009318) #31	GSTCD (ENSMMNG00015009272) #32	INTS12 (ENSMMNG00015009253) #33	ARHGEF38 (ENSMMNG00015009239) #34	ENSMMNG00015009223 #34
Vaquita	MODERN SPECIES	16	ELOVL6 (ENSPSNG00000004817) #7	EGF (ENSPSNG00000005048) #8	LRIT3 (ENSPSNG00000005437) #9	RRH (ENSPSNG00000005525) #10	GAR1 (ENSPSNG00000005487) #11	CFI (ENSPSNG00000005631) #12	PLA2G12A (ENSPSNG00000005900) #13	CASP6 (ENSPSNG00000005965) #14	MCUB (ENSPSNG00000006033) #15	ENSPSNG00000006059	SEC24B (ENSPSNG00000006099) #16	COL25A1 (ENSPSNG00000006689) #18	ETNPPL (ENSPSNG00000007968) #19	ENSPSNG00000008254 #20	ENSPSNG00000008387	LEF1 (ENSPSNG00000008457) #22	HADH (ENSPSNG00000008706) #23	CYP2U1 (ENSPSNG00000008786) #24	SGMS2 (ENSPSNG00000008846) #25	ENSPSNG00000008882	PAPSS1 (ENSPSNG00000008923) #26	DKK2 (ENSPSNG00000008969) #27	ENSPSNG00000009014	GIMD1 (ENSPSNG00000009033) #28	AIMP1 (ENSPSNG00000009062) #29	TBCK (ENSPSNG00000009128) #30	NPNT (ENSPSNG00000009533) #31	GSTCD (ENSPSNG00000006855) #32	INTS12 (ENSPSNG00000006928) #33	ENSPSNG00000006969 #34	ENSPSNG00000007024 #34
Dolphin	MODERN SPECIES	1488																LEF1 (ENSTTRG00000008109) #22	HADH (ENSTTRG00000008088) #23	ENSTTRG00000008065 #24	SGMS2 (ENSTTRG00000008049) #25
Sperm whale	MODERN SPECIES	18	ENSPCTG00005003344	EGF (ENSPCTG00005002997) #8	LRIT3 (ENSPCTG00005002927) #9	RRH (ENSPCTG00005002914) #10	GAR1 (ENSPCTG00005002877) #11	CFI (ENSPCTG00005002683) #12	PLA2G12A (ENSPCTG00005002634) #13	CASP6 (ENSPCTG00005002597) #14	MCUB (ENSPCTG00005002570) #15	ENSPCTG00005002564	SEC24B (ENSPCTG00005002490) #16	COL25A1 (ENSPCTG00005001710) #18	ETNPPL (ENSPCTG00005001536) #19	OSTC (ENSPCTG00005001507) #20	RPL34 (ENSPCTG00005001492) ##21	LEF1 (ENSPCTG00005001263) #22	HADH (ENSPCTG00005001187) #23	CYP2U1 (ENSPCTG00005001173) #24	SGMS2 (ENSPCTG00005001158) #25	ENSPCTG00005001150	ENSPCTG00005001147	PAPSS1 (ENSPCTG00005001117) #26	DKK2 (ENSPCTG00005001096) #27	GIMD1 (ENSPCTG00005001086) #28	AIMP1 (ENSPCTG00005001065) #29	TBCK (ENSPCTG00005001017) #30	NPNT (ENSPCTG00005000534) #31	GSTCD (ENSPCTG00005000434) #32	INTS12 (ENSPCTG00005000413) #33	ENSPCTG00005000394 #34	ENSPCTG00005000365 #34
Blue whale	MODERN SPECIES	16	ELOVL6 (ENSBMSG00010011132) #7	EGF (ENSBMSG00010010764) #8	LRIT3 (ENSBMSG00010010683) #9	RRH (ENSBMSG00010010665) #10	GAR1 (ENSBMSG00010010651) #11	CFI (ENSBMSG00010010282) #12	PLA2G12A (ENSBMSG00010010216) #13	ENSBMSG00010010200	CASP6 (ENSBMSG00010010157) #14	MCUB (ENSBMSG00010010120) #15	SEC24B (ENSBMSG00010010015) #16	COL25A1 (ENSBMSG00010009308) #18	ETNPPL (ENSBMSG00010009166) #19	ENSBMSG00010009146 #20	ENSBMSG00010009129 ##21	LEF1 (ENSBMSG00010009062) #22	HADH (ENSBMSG00010009016) #23	CYP2U1 (ENSBMSG00010008999) #24	PAPSS1 (ENSBMSG00010008949) #26	DKK2 (ENSBMSG00010008913) #27	ENSBMSG00010008901	GIMD1 (ENSBMSG00010008886) #28	AIMP1 (ENSBMSG00010008873) #29	TBCK (ENSBMSG00010008825) #30	NPNT (ENSBMSG00010008674) #31	GSTCD (ENSBMSG00010008619) #32	INTS12 (ENSBMSG00010008596) #33	ARHGEF38 (ENSBMSG00010008571) #34	ENSBMSG00010008552 #34	ENSBMSG00010008529	PPA2 (ENSBMSG00010008199) #35
Pecora	ANCESTRAL SPECIES	15	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.e.a ##21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Percora_a	ANCESTRAL SPECIES	18	ENSGT00390000002517.a.b.a.g.a.a	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.b #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000001376.gb.a #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Siberian musk deer	MODERN SPECIES	1271	ENSMMSG00000023982	LRIT3 (ENSMMSG00000023978) #9	RRH (ENSMMSG00000023973) #10	ENSMMSG00000023967 #11	ENSMMSG00000023961 #11	CFI (ENSMMSG00000023937) #12	ENSMMSG00000023917 #13	ENSMMSG00000023895 #14	MCUB (ENSMMSG00000023886) #15	SEC24B (ENSMMSG00000023830) #16	ENSMMSG00000023809	COL25A1 (ENSMMSG00000023350) #18	ETNPPL (ENSMMSG00000023216) #19	ENSMMSG00000023201 #20	ENSMMSG00000023187 ##21	LEF1 (ENSMMSG00000023098) #22	HADH (ENSMMSG00000023062) #23	CYP2U1 (ENSMMSG00000023053) #24	SGMS2 (ENSMMSG00000023045) #25	PAPSS1 (ENSMMSG00000023028) #26	ENSMMSG00000023019	DKK2 (ENSMMSG00000023012) #27	GIMD1 (ENSMMSG00000023007) #28	AIMP1 (ENSMMSG00000023001) #29	TBCK (ENSMMSG00000022970) #30	NPNT (ENSMMSG00000022907) #31	GSTCD (ENSMMSG00000022879) #32	INTS12 (ENSMMSG00000022865) #33	ENSMMSG00000022850 #34	ENSMMSG00000022844 #34	PPA2 (ENSMMSG00000022699) #35
Bovidae	ANCESTRAL SPECIES	18	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00390000002517.a.b.a.g.a.a	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.b.a #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Bovinae	ANCESTRAL SPECIES	15	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000165227.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.b.a #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00390000001376.hb #20	ENSGT00390000008294.e.a ##21	ENSGT00940000159660 #22	ENSGT00940000159984.h #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Bos	ANCESTRAL SPECIES	15	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000165227.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.b.a #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00390000001376.hb #20	ENSGT00390000008294.e.a ##21	ENSGT00940000159660 #22	ENSGT00940000159984.h #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT01030000234542.b.a.a.b.a.b.k.a.a	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Bos_a	ANCESTRAL SPECIES	33	ENSGT00390000002517.a.b.a.g.a.a	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000165227.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.b.a #20	ENSGT00390000001376.hb #20	ENSGT00390000008294.e.a ##21	ENSGT00940000159660 #22	ENSGT00940000159984.h #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT01030000234542.b.a.a.b.a.b.k.a.a	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Wild yak	MODERN SPECIES	793	ENPEP (ENSBMUG00000017033)	ELOVL6 (ENSBMUG00000017059) #7	LRIT3 (ENSBMUG00000017093) #9	RRH (ENSBMUG00000017139) #10	GAR1 (ENSBMUG00000017171) #11	CFI (ENSBMUG00000017337) #12	PLA2G12A (ENSBMUG00000017371) #13	CASP6 (ENSBMUG00000017395) #14	MCUB (ENSBMUG00000017425) #15	SEC24B (ENSBMUG00000017475) #16	ENSBMUG00000017501	COL25A1 (ENSBMUG00000017943) #18	ETNPPL (ENSBMUG00000018140) #19	ENSBMUG00000018159 #20	ENSBMUG00000018184 ##21	LEF1 (ENSBMUG00000018299) #22	HADH (ENSBMUG00000018393) #23	CYP2U1 (ENSBMUG00000018417) #24	SGMS2 (ENSBMUG00000018471) #25	SLC28A3 (ENSBMUG00000018525)	NTRK2 (ENSBMUG00000018642)
Domestic yak	MODERN SPECIES	25	ELOVL6 (ENSBGRG00000002007) #7	ENSBGRG00000001977 #8	ENSBGRG00000001959	LRIT3 (ENSBGRG00000001925) #9	RRH (ENSBGRG00000001886) #10	GAR1 (ENSBGRG00000001872) #11	CFI (ENSBGRG00000001749) #12	PLA2G12A (ENSBGRG00000001718) #13	CASP6 (ENSBGRG00000001666) #14	MCUB (ENSBGRG00000001558) #15	SEC24B (ENSBGRG00000001484) #16	COL25A1 (ENSBGRG00000000622) #18	ETNPPL (ENSBGRG00000000493) #19	ENSBGRG00000000413 #20	ENSBGRG00000000373 ##21	LEF1 (ENSBGRG00000006944) #22	HADH (ENSBGRG00000006801) #23	CYP2U1 (ENSBGRG00000006714) #24	SGMS2 (ENSBGRG00000006674) #25	PAPSS1 (ENSBGRG00000006562) #26	DKK2 (ENSBGRG00000006499) #27	GIMD1 (ENSBGRG00000006470) #28	ENSBGRG00000006455	AIMP1 (ENSBGRG00000006343) #29	TBCK (ENSBGRG00000006065) #30	ENSBGRG00000005997	NPNT (ENSBGRG00000005082) #31	GSTCD (ENSBGRG00000004892) #32	INTS12 (ENSBGRG00000004828) #33	ARHGEF38 (ENSBGRG00000004759) #34	ENSBGRG00000004739
Bos_b	ANCESTRAL SPECIES	14	ENSGT00940000158366 #8	ENSGT00390000002517.a.b.a.g.a.a	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000165227.b	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.b.a #20	ENSGT00390000008294.e.b.a.b ##21	ENSGT00940000159660 #22	ENSGT00940000159984.h #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT01030000234542.b.a.a.b.a.b.k.a.a	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Cow	MODERN SPECIES	25	EGF (ENSBTAG00000048812) #8	ENSBTAG00000046949	LRIT3 (ENSBTAG00000007019) #9	ENSBTAG00000053284	RRH (ENSBTAG00000000751) #10	GAR1 (ENSBTAG00000000748) #11	CFI (ENSBTAG00000034501) #12	PLA2G12A (ENSBTAG00000015230) #13	CASP6 (ENSBTAG00000012537) #14	MCUB (ENSBTAG00000012995) #15	SEC24B (ENSBTAG00000010945) #16	ENSBTAG00000049691	ETNPPL (ENSBTAG00000010284) #19	OSTC (ENSBTAG00000011611) #20	RPL34 (ENSBTAG00000014226) ##21	LEF1 (ENSBTAG00000006844) #22	HADH (ENSBTAG00000002049) #23	CYP2U1 (ENSBTAG00000012972) #24	SGMS2 (ENSBTAG00000016805) #25	PAPSS1 (ENSBTAG00000012961) #26	DKK2 (ENSBTAG00000012969) #27	ENSBTAG00000054885	GIMD1 (ENSBTAG00000047891) #28	AIMP1 (ENSBTAG00000004230) #29	TBCK (ENSBTAG00000004227) #30	ENSBTAG00000054813	ENSBTAG00000046270	NPNT (ENSBTAG00000006686) #31	GSTCD (ENSBTAG00000013927) #32	INTS12 (ENSBTAG00000033648) #33	ARHGEF38 (ENSBTAG00000008797) #34
Hybrid Bos Indicus	MODERN SPECIES	25	ENSBIXG00005026062	ELOVL6 (ENSBIXG00005026027) #7	ENSBIXG00005005779 #8	ENSBIXG00005025927	LRIT3 (ENSBIXG00005025878) #9	MCUB (ENSBIXG00005025807) #15	CFI (ENSBIXG00005005775) #12	CASP6 (ENSBIXG00005007241) #14	SEC24B (ENSBIXG00005006858) #16	ENSBIXG00005007629	COL25A1 (ENSBIXG00005025230) #18	ETNPPL (ENSBIXG00005025104) #19	ENSBIXG00005005563 #20	ENSBIXG00005024929 ##21	ENSBIXG00005004244	LEF1 (ENSBIXG00005024848) #22	HADH (ENSBIXG00005024749) #23	CYP2U1 (ENSBIXG00005024695) #24	SGMS2 (ENSBIXG00005024656) #25	PAPSS1 (ENSBIXG00005024610) #26	ENSBIXG00005004183	DKK2 (ENSBIXG00005024455) #27	ENSBIXG00005024432	GIMD1 (ENSBIXG00005024421) #28	AIMP1 (ENSBIXG00005024391) #29	TBCK (ENSBIXG00005024271) #30	ENSBIXG00005024159	ENSBIXG00005024147	NPNT (ENSBIXG00005004120) #31	GSTCD (ENSBIXG00005023858) #32	INTS12 (ENSBIXG00005023740) #33
American bison	MODERN SPECIES	3303	EGF (ENSBBBG00000025002) #8	ENSBBBG00000024938	LRIT3 (ENSBBBG00000006581) #9	RRH (ENSBBBG00000024917) #10	GAR1 (ENSBBBG00000006563) #11	CFI (ENSBBBG00000024858) #12	PLA2G12A (ENSBBBG00000024789) #13	CASP6 (ENSBBBG00000024760) #14	MCUB (ENSBBBG00000007811) #15	SEC24B (ENSBBBG00000000163) #16	ENSBBBG00000006417	COL25A1 (ENSBBBG00000024550) #18	ETNPPL (ENSBBBG00000023878) #19	ENSBBBG00000006204 #20	ENSBBBG00000023803 #21	LEF1 (ENSBBBG00000023784) #22	ENSBBBG00000023720 #23	CYP2U1 (ENSBBBG00000023696) #24	SGMS2 (ENSBBBG00000023687) #25	PAPSS1 (ENSBBBG00000023663) #26
Caprinae	ANCESTRAL SPECIES	13	ENSGT00940000162789	ENSGT00940000156946	ENSGT01050000244965.b.o #7	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.c #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.gb.a #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984.i #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950.k.a.a #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.n #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Rambouillet Sheep	MODERN SPECIES	22	ELOVL6 (ENSOARG00020023319) #7	RRH (ENSOARG00020023371) #10	GAR1 (ENSOARG00020023399) #11	PLA2G12A (ENSOARG00020023478) #12	MCUB (ENSOARG00020024210) #15	SEC24B (ENSOARG00020024258) #16	ENSOARG00020024351	COL25A1 (ENSOARG00020024421) #18	ETNPPL (ENSOARG00020025401) #19	OSTC (ENSOARG00020025423) #20	ENSOARG00020025433 ##21	ENSOARG00020025438	ENSOARG00020025445 #14	ENSOARG00020025453	ENSOARG00020025464 ##21	LEF1 (ENSOARG00020025493) #22	HADH (ENSOARG00020025577) #23	CYP2U1 (ENSOARG00020025587) #24	SGMS2 (ENSOARG00020025595) #25	PAPSS1 (ENSOARG00020025599) #26	ENSOARG00020025608	ENSOARG00020025611	DKK2 (ENSOARG00020025615) #27	ENSOARG00020025618	GIMD1 (ENSOARG00020025626) #28	ENSOARG00020025630 #29	TBCK (ENSOARG00020025643) #30	NPNT (ENSOARG00020025758) #31	GSTCD (ENSOARG00020025853) #32	INTS12 (ENSOARG00020025864) #33	ENSOARG00020025875 #34
Goat	MODERN SPECIES	25	ENPEP (ENSCHIG00000020658)	ENSCHIG00000017386	ELOVL6 (ENSCHIG00000026063) #7	LRIT3 (ENSCHIG00000026202) #9	RRH (ENSCHIG00000004020) #10	ENSCHIG00000016026 #11	CFI (ENSCHIG00000006982) #12	PLA2G12A (ENSCHIG00000026641) #13	CASP6 (ENSCHIG00000011955) #14	MCUB (ENSCHIG00000011971) #15	SEC24B (ENSCHIG00000018301) #16	COL25A1 (ENSCHIG00000016113) #18	ETNPPL (ENSCHIG00000015229) #19	ENSCHIG00000015972 #20	ENSCHIG00000013243 ##21	LEF1 (ENSCHIG00000025316) #22	ENSCHIG00000013637 #23	CYP2U1 (ENSCHIG00000026026) #24	SGMS2 (ENSCHIG00000017842) #25	PAPSS1 (ENSCHIG00000007800) #26	DKK2 (ENSCHIG00000026036) #27	ENSCHIG00000021709 #28	ENSCHIG00000019094 #29	TBCK (ENSCHIG00000014456) #30	NPNT (ENSCHIG00000019044) #31	GSTCD (ENSCHIG00000018039) #32	INTS12 (ENSCHIG00000022093) #33	ARHGEF38 (ENSCHIG00000012264) #34	PPA2 (ENSCHIG00000008289) #35	TET2 (ENSCHIG00000019979) #36	CXXC4 (ENSCHIG00000010456) #37
Yarkand deer	MODERN SPECIES	8	ENSCHYG00000018367	ENSCHYG00000018402 #8	LRIT3 (ENSCHYG00000018518) #9	RRH (ENSCHYG00000018607) #10	GAR1 (ENSCHYG00000018741) #11	CFI (ENSCHYG00000018892) #12	ENSCHYG00000020524 #13	CASP6 (ENSCHYG00000020581) #14	MCUB (ENSCHYG00000020811) #15	SEC24B (ENSCHYG00000021070) #16	COL25A1 (ENSCHYG00000023049) #18	ETNPPL (ENSCHYG00000024949) #19	OSTC (ENSCHYG00000025020) #20	ENSCHYG00000025066	ENSCHYG00000025081 #21	LEF1 (ENSCHYG00000025171) #22	HADH (ENSCHYG00000025336) #23	CYP2U1 (ENSCHYG00000025388) #24	ENSCHYG00000025488 #26	ENSCHYG00000025558 #27	ENSCHYG00000025585 #28	ENSCHYG00000025597 #29	ENSCHYG00000025630 #30	ENSCHYG00000025656 #32	ENSCHYG00000025703 #31	ENSCHYG00000025833	ENSCHYG00000025860 #30	ENSCHYG00000025869	ENSCHYG00000025878 #29	ENSCHYG00000025908 #28	ENSCHYG00000025921 #27
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Caniformia	ANCESTRAL SPECIES	7	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db.g #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Canidae	ANCESTRAL SPECIES	40	ENSGT00940000162789	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.cb.a #20	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950.q #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.r #35	ENSGT00940000160003 #36
Canis_lupus	ANCESTRAL SPECIES	30	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00950000183210.d.a.c.b.b.b.b	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000015789.c.b	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950.q #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.q.b #35	ENSGT00390000017004.a.a.r #35
Dingo	MODERN SPECIES	308	ELOVL6 (ENSCAFG00020015726) #7	ENSCAFG00020015724	EGF (ENSCAFG00020015579) #8	LRIT3 (ENSCAFG00020015570) #9	RRH (ENSCAFG00020015567) #10	GAR1 (ENSCAFG00020015566) #11	CFI (ENSCAFG00020015559) #12	PLA2G12A (ENSCAFG00020015557) #13	CASP6 (ENSCAFG00020015552) #14	MCUB (ENSCAFG00020015544) #15	SEC24B (ENSCAFG00020010198) #16	ENSCAFG00020010068 #19	ENSCAFG00020010062 #20	ENSCAFG00020010061 ##21	ENSCAFG00020010057	LEF1 (ENSCAFG00020010052) #22	HADH (ENSCAFG00020010045) #23	CYP2U1 (ENSCAFG00020010041) #24	SGMS2 (ENSCAFG00020010038) #25	ENSCAFG00020010027 #26	DKK2 (ENSCAFG00020010010) #27	ENSCAFG00020010008	ENSCAFG00020010004	GIMD1 (ENSCAFG00020009998) #28	AIMP1 (ENSCAFG00020009990) #29	ENSCAFG00020009987	ENSCAFG00020009967 #30	NPNT (ENSCAFG00020009929) #31	GSTCD (ENSCAFG00020009920) #32	INTS12 (ENSCAFG00020009912) #33	ARHGEF38 (ENSCAFG00020009907) #34
Dog	MODERN SPECIES	25	ENSCAFG00845015801	ELOVL6 (ENSCAFG00845030224) #7	EGF (ENSCAFG00845030111) #8	LRIT3 (ENSCAFG00845030077) #9	GAR1 (ENSCAFG00845030039) #10	CFI (ENSCAFG00845029982) #12	PLA2G12A (ENSCAFG00845029955) #13	CASP6 (ENSCAFG00845029938) #14	MCUB (ENSCAFG00845029908) #15	SEC24B (ENSCAFG00845029793) #16	COL25A1 (ENSCAFG00845029602) #18	ETNPPL (ENSCAFG00845029485) #19	OSTC (ENSCAFG00845029437) #20	RPL34 (ENSCAFG00845029396) #21	ENSCAFG00845029318	LEF1 (ENSCAFG00845029249) #22	HADH (ENSCAFG00845029127) #23	ENSCAFG00845028935 #24	SGMS2 (ENSCAFG00845028905) #25	PAPSS1 (ENSCAFG00845028839) #26	DKK2 (ENSCAFG00845028785) #27	GIMD1 (ENSCAFG00845028766) #28	AIMP1 (ENSCAFG00845028734) #29	TBCK (ENSCAFG00845028525) #30	NPNT (ENSCAFG00845028293) #31	ENSCAFG00845028217	GSTCD (ENSCAFG00845028155) #32	INTS12 (ENSCAFG00845028090) #33	ARHGEF38 (ENSCAFG00845027848) #34	ENSCAFG00845027670 #35	TET2 (ENSCAFG00845027576) #36
Red fox	MODERN SPECIES	137					ELOVL6 (ENSVVUG00000017660) #7	EGF (ENSVVUG00000017635) #8	LRIT3 (ENSVVUG00000017631) #9	RRH (ENSVVUG00000017623) #10	GAR1 (ENSVVUG00000017612) #11	CFI (ENSVVUG00000017596) #12	PLA2G12A (ENSVVUG00000017587) #13	SEC24B (ENSVVUG00000017541) #16	ETNPPL (ENSVVUG00000017512) #19	ENSVVUG00000017509 #20	ENSVVUG00000017498	LEF1 (ENSVVUG00000017446) #22	HADH (ENSVVUG00000017423) #23	CYP2U1 (ENSVVUG00000017417) #24	SGMS2 (ENSVVUG00000017400) #25	PAPSS1 (ENSVVUG00000017360) #26	ENSVVUG00000017338	DKK2 (ENSVVUG00000017331) #27	GIMD1 (ENSVVUG00000017326) #28	AIMP1 (ENSVVUG00000017317) #29	TBCK (ENSVVUG00000017257) #30	NPNT (ENSVVUG00000017188) #31	GSTCD (ENSVVUG00000017171) #32	INTS12 (ENSVVUG00000017161) #33	ARHGEF38 (ENSVVUG00000017158) #34	PPA2 (ENSVVUG00000017145) #35	TET2 (ENSVVUG00000017141) #36
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db.g #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Ursidae	ANCESTRAL SPECIES	17	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042.b #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db.g #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Ursus	DUPLICATION
Ursus	ANCESTRAL SPECIES	74	ENSGT00950000183010.a.b.a.a.a.a.a.b.a.a	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042.b #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00390000001376.db.g #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660.e #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Polar bear	MODERN SPECIES	159	ENPEP (ENSUMAG00000000955)	ENSUMAG00000000844	ELOVL6 (ENSUMAG00000000832) #7	EGF (ENSUMAG00000000821) #8	LRIT3 (ENSUMAG00000000802) #9	RRH (ENSUMAG00000000781) #10	GAR1 (ENSUMAG00000000776) #11	CFI (ENSUMAG00000000770) #12	PLA2G12A (ENSUMAG00000000760) #13	ENSUMAG00000000755 #14	MCUB (ENSUMAG00000000708) #15	SEC24B (ENSUMAG00000000694) #16	ETNPPL (ENSUMAG00000000654) #19	OSTC (ENSUMAG00000000640) #20	ENSUMAG00000000631 #21	LEF1 (ENSUMAG00000000609) #22	HADH (ENSUMAG00000000448) #23	CYP2U1 (ENSUMAG00000000418) #24	SGMS2 (ENSUMAG00000000407) #25	PAPSS1 (ENSUMAG00000000397) #26	DKK2 (ENSUMAG00000000387) #27	GIMD1 (ENSUMAG00000000374) #28	AIMP1 (ENSUMAG00000000180) #29	TBCK (ENSUMAG00000000081) #30	NPNT (ENSUMAG00000022667) #31	GSTCD (ENSUMAG00000022658) #32	INTS12 (ENSUMAG00000022654) #33	ARHGEF38 (ENSUMAG00000022647) #34	PPA2 (ENSUMAG00000022641) #35	TET2 (ENSUMAG00000022620) #36	CXXC4 (ENSUMAG00000022608) #37
American black bear	MODERN SPECIES	4711																ENSUAMG00000009947 #22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000159660.f #22
American black bear	MODERN SPECIES	754																ENSUAMG00000027140 #22	HADH (ENSUAMG00000027141) #23	CYP2U1 (ENSUAMG00000027143) #24	SGMS2 (ENSUAMG00000027145) #25
Giant Panda	MODERN SPECIES	2	ENSAMEG00000030246	EGF (ENSAMEG00000014957) #8	ENSAMEG00000004605 #11	LRIT3 (ENSAMEG00000004620) #9	ENSAMEG00000004608 #10	ENSAMEG00000025418	CFI (ENSAMEG00000004559) #12	PLA2G12A (ENSAMEG00000004540) #13	CASP6 (ENSAMEG00000004526) #14	MCUB (ENSAMEG00000004507) #15	SEC24B (ENSAMEG00000001636) #16	COL25A1 (ENSAMEG00000001701) #18	ETNPPL (ENSAMEG00000001726) #19	OSTC (ENSAMEG00000001753) #20	RPL34 (ENSAMEG00000001758) ##21	LEF1 (ENSAMEG00000001768) #22	HADH (ENSAMEG00000001814) #23	CYP2U1 (ENSAMEG00000001857) #24	SGMS2 (ENSAMEG00000001890) #25	PAPSS1 (ENSAMEG00000001893) #26	DKK2 (ENSAMEG00000024962) #27	GIMD1 (ENSAMEG00000017505) #28	AIMP1 (ENSAMEG00000017499) #29	TBCK (ENSAMEG00000017479) #30	NPNT (ENSAMEG00000017465) #31	GSTCD (ENSAMEG00000017457) #32	INTS12 (ENSAMEG00000017448) #33	ARHGEF38 (ENSAMEG00000017435) #34	PPA2 (ENSAMEG00000006850) #35	TET2 (ENSAMEG00000006878) #36	CXXC4 (ENSAMEG00000011282) #37
Mustelinae	ANCESTRAL SPECIES	50	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db.f.b #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.o #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
American mink	MODERN SPECIES	23	ENPEP (ENSNVIG00000008861)	ELOVL6 (ENSNVIG00000008824) #7	EGF (ENSNVIG00000008686) #8	LRIT3 (ENSNVIG00000008664) #9	RRH (ENSNVIG00000008643) #10	GAR1 (ENSNVIG00000008616) #11	ENSNVIG00000008605 #12	PLA2G12A (ENSNVIG00000008582) #13	CASP6 (ENSNVIG00000008531) #14	MCUB (ENSNVIG00000008506) #15	SEC24B (ENSNVIG00000007302) #16	COL25A1 (ENSNVIG00000006813) #18	ETNPPL (ENSNVIG00000006726) #19	OSTC (ENSNVIG00000006710) #20	ENSNVIG00000006689 ##21	Lef-1 (ENSNVIG00000006522) #22	ENSNVIG00000006476	CYP2U1 (ENSNVIG00000006464) #24	ENSNVIG00000006446	ENSNVIG00000006431	SGMS2 (ENSNVIG00000006393) #25	PAPSS1 (ENSNVIG00000006373) #26	DKK2 (ENSNVIG00000006330) #27	GIMD1 (ENSNVIG00000006313) #28	AIMP1 (ENSNVIG00000006299) #29	TBCK (ENSNVIG00000006152) #30	NPNT (ENSNVIG00000005955) #31	GSTCD (ENSNVIG00000005920) #32	INT12 (ENSNVIG00000005902) #33	ENSNVIG00000005878 #34	ENSNVIG00000005869 #34
Ferret	MODERN SPECIES	184	ELOVL6 (ENSMPUG00000008518) #7	EGF (ENSMPUG00000008530) #8	LRIT3 (ENSMPUG00000008547) #9	RRH (ENSMPUG00000008553) #10	GAR1 (ENSMPUG00000008615) #11	CFI (ENSMPUG00000008623) #12	PLA2G12A (ENSMPUG00000008637) #13	MCUB (ENSMPUG00000008645) #15	SEC24B (ENSMPUG00000008650) #16	ENSMPUG00000008670	ENSMPUG00000008674	COL25A1 (ENSMPUG00000008679) #18	ETNPPL (ENSMPUG00000008782) #19	OSTC (ENSMPUG00000008869) #20	ENSMPUG00000008873 ##21	LEF1 (ENSMPUG00000008884) #22	HADH (ENSMPUG00000008891) #23	CYP2U1 (ENSMPUG00000008902) #24	SGMS2 (ENSMPUG00000008910) #25	ENSMPUG00000008916	PAPSS1 (ENSMPUG00000008920) #26	DKK2 (ENSMPUG00000008937) #27	GIMD1 (ENSMPUG00000008944) #28	AIMP1 (ENSMPUG00000008952) #29	TBCK (ENSMPUG00000008962) #30	NPNT (ENSMPUG00000008978) #31	GSTCD (ENSMPUG00000008991) #32	INTS12 (ENSMPUG00000008999) #33	ARHGEF38 (ENSMPUG00000009003) #34	PPA2 (ENSMPUG00000009047) #35	TET2 (ENSMPUG00000009162) #36
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Cat	MODERN SPECIES	235	ELOVL6 (ENSFCAG00000039104) #7	EGF (ENSFCAG00000000506) #8	LRIT3 (ENSFCAG00000035670) #9	RRH (ENSFCAG00000005461) #10	ENSFCAG00000040791 #11	CFI (ENSFCAG00000000105) #12	ENSFCAG00000034487	CASP6 (ENSFCAG00000003400) #14	MCUB (ENSFCAG00000018997) #15	SEC24B (ENSFCAG00000000069) #16	COL25A1 (ENSFCAG00000041813) #18	ENSFCAG00000050516	ETNPPL (ENSFCAG00000002319) #19	OSTC (ENSFCAG00000040199) #20	RPL34 (ENSFCAG00000015502) ##21	LEF1 (ENSFCAG00000027039) #22	HADH (ENSFCAG00000022260) #23	CYP2U1 (ENSFCAG00000015335) #24	PAPSS1 (ENSFCAG00000007221) #26	SGMS2 (ENSFCAG00000012289) #25	ENSFCAG00000034912	DKK2 (ENSFCAG00000043481) #27	GIMD1 (ENSFCAG00000036567) #28	AIMP1 (ENSFCAG00000012896) #29	TBCK (ENSFCAG00000014486) #30	NPNT (ENSFCAG00000023889) #31	GSTCD (ENSFCAG00000024646) #32	INTS12 (ENSFCAG00000027227) #33	ENSFCAG00000026961 #34	ENSFCAG00000044090 #34	PPA2 (ENSFCAG00000028660) #35
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950.p #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Tiger	MODERN SPECIES	151												COL25A1 (ENSPTIG00000013006) #18	ETNPPL (ENSPTIG00000013575) #19	OSTC (ENSPTIG00000013776) #20	ENSPTIG00000013799 #21	LEF1 (ENSPTIG00000013969) #22	HADH (ENSPTIG00000014249) #23	CYP2U1 (ENSPTIG00000014483) #24	SGMS2 (ENSPTIG00000014506) #25	PAPSS1 (ENSPTIG00000015478) #26	DKK2 (ENSPTIG00000015687) #27
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950.p #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
leopard	MODERN SPECIES	3	ELOVL6 (ENSPPRG00000011540) #7	EGF (ENSPPRG00000019907) #8	LRIT3 (ENSPPRG00000021787) #9	RRH (ENSPPRG00000023871) #10	GAR1 (ENSPPRG00000023697) #11	ENSPPRG00000023609	CFI (ENSPPRG00000001399) #12	PLA2G12A (ENSPPRG00000001811) #13	CASP6 (ENSPPRG00000002287) #14	MCUB (ENSPPRG00000002855) #15	SEC24B (ENSPPRG00000004492) #16	COL25A1 (ENSPPRG00000010801) #18	ETNPPL (ENSPPRG00000012486) #19	ENSPPRG00000012933 #20	ENSPPRG00000013513 #21	LEF1 (ENSPPRG00000015396) #22	HADH (ENSPPRG00000020822) #23	CYP2U1 (ENSPPRG00000022125) #24	SGMS2 (ENSPPRG00000023391) #25	ENSPPRG00000022924	PAPSS1 (ENSPPRG00000022612) #26	ENSPPRG00000000898	DKK2 (ENSPPRG00000001046) #27	GIMD1 (ENSPPRG00000002041) #28	ENSPPRG00000003078 #29	TBCK (ENSPPRG00000006296) #30	NPNT (ENSPPRG00000010205) #31	GSTCD (ENSPPRG00000012754) #32	INTS12 (ENSPPRG00000014557) #33	ENSPPRG00000015602 #34	ENSPPRG00000016640 #34
lion	MODERN SPECIES	4	ENPEP (ENSPLOG00000004896)	ELOVL6 (ENSPLOG00000004917) #7	EGF (ENSPLOG00000005057) #8	LRIT3 (ENSPLOG00000005302) #9	RRH (ENSPLOG00000005309) #10	GAR1 (ENSPLOG00000005331) #11	CFI (ENSPLOG00000005431) #12	PLA2G12A (ENSPLOG00000005482) #13	CASP6 (ENSPLOG00000005535) #14	MCUB (ENSPLOG00000005572) #15	SEC24B (ENSPLOG00000005625) #16	COL25A1 (ENSPLOG00000005916) #18	ETNPPL (ENSPLOG00000007649) #19	OSTC (ENSPLOG00000007801) #20	ENSPLOG00000007832 #21	LEF1 (ENSPLOG00000007905) #22	HADH (ENSPLOG00000008215) #23	CYP2U1 (ENSPLOG00000008280) #24	SGMS2 (ENSPLOG00000008317) #25	PAPSS1 (ENSPLOG00000008350) #26	ENSPLOG00000008380	DKK2 (ENSPLOG00000008392) #27	GIMD1 (ENSPLOG00000008434) #28	AIMP1 (ENSPLOG00000008460) #29	TBCK (ENSPLOG00000008554) #30	NPNT (ENSPLOG00000008713) #31	GSTCD (ENSPLOG00000008867) #32	INTS12 (ENSPLOG00000008950) #33	ENSPLOG00000008987 #34	ENSPLOG00000009051 #34	ENSPLOG00000009093
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Equus	ANCESTRAL SPECIES	24	ENSGT00940000162789	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000012976.c.a.a	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950.w #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Donkey	MODERN SPECIES	22	ENSEASG00005004686	ELOVL6 (ENSEASG00005004683) #7	EGF (ENSEASG00005004674) #8	ENSEASG00005004681	LRIT3 (ENSEASG00005004671) #9	RRH (ENSEASG00005004665) #10	GAR1 (ENSEASG00005004658) #11	CFI (ENSEASG00005004646) #12	CASP6 (ENSEASG00005004631) #14	MCUB (ENSEASG00005004625) #15	SEC24B (ENSEASG00005004609) #16	COL25A1 (ENSEASG00005036242) #18	ETNPPL (ENSEASG00005004593) #19	OSTC (ENSEASG00005034695) #20	ENSEASG00005004585 ##21	LEF1 (ENSEASG00005004575) #22	HADH (ENSEASG00005004564) #23	CYP2U1 (ENSEASG00005004558) #24	SGMS2 (ENSEASG00005004553) #25	ENSEASG00005033971	PAPSS1 (ENSEASG00005004544) #26	DKK2 (ENSEASG00005028714) #27	ENSEASG00005004539 #28	ENSEASG00005004535 #29	TBCK (ENSEASG00005004526) #30	NPNT (ENSEASG00005004514) #31	GSTCD (ENSEASG00005004503) #32	INTS12 (ENSEASG00005004498) #33	ARHGEF38 (ENSEASG00005004487) #34	ENSEASG00005033358	PPA2 (ENSEASG00005004477) #35
Horse	MODERN SPECIES	11	PITX2 (ENSECAG00000008407)	ENPEP (ENSECAG00000009107)	ELOVL6 (ENSECAG00000010720) #7	EGF (ENSECAG00000010741) #8	LRIT3 (ENSECAG00000013302) #9	RRH (ENSECAG00000013464) #10	GAR1 (ENSECAG00000013624) #11	CFI (ENSECAG00000013869) #12	CASP6 (ENSECAG00000015479) #14	MCUB (ENSECAG00000016301) #15	SEC24B (ENSECAG00000016518) #16	COL25A1 (ENSECAG00000017518) #18	ETNPPL (ENSECAG00000018724) #19	OSTC (ENSECAG00000019709) #20	RPL34 (ENSECAG00000019719) ##21	LEF1 (ENSECAG00000019975) #22	ENSECAG00000057434	CYP2U1 (ENSECAG00000021232) #23	CYP2U1 (ENSECAG00000048143) #24	SGMS2 (ENSECAG00000021665) #25	ENSECAG00000032757	PAPSS1 (ENSECAG00000021678) #26	DKK2 (ENSECAG00000032911) #27	AIMP1 (ENSECAG00000006138) #29	TBCK (ENSECAG00000006577) #30	NPNT (ENSECAG00000008518) #31	GSTCD (ENSECAG00000009590) #32	ARHGEF38 (ENSECAG00000011171) #34	INTS12 (ENSECAG00000010911) #33	PPA2 (ENSECAG00000011236) #35	TET2 (ENSECAG00000004773) #36
Chiroptera	ANCESTRAL SPECIES	9	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Megabat	MODERN SPECIES	875																LEF1 (ENSPVAG00000016128) #22	HADH (ENSPVAG00000016127) #23	CYP2U1 (ENSPVAG00000016125) #24	SGMS2 (ENSPVAG00000016124) #25	PAPSS1 (ENSPVAG00000016123) #26
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.db #20	ENSGT00390000008294.f ##21	ENSGT00390000008294.e.b.a.a #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Greater horseshoe bat	MODERN SPECIES	23	ELOVL6 (ENSRFEG00010004640) #7	EGF (ENSRFEG00010004614) #8	LRIT3 (ENSRFEG00010004578) #9	RRH (ENSRFEG00010004533) #10	GAR1 (ENSRFEG00010004525) #11	ENSRFEG00010004517	CFI (ENSRFEG00010004410) #12	CASP6 (ENSRFEG00010004339) #14	MCUB (ENSRFEG00010004308) #15	SEC24B (ENSRFEG00010004287) #16	COL25A1 (ENSRFEG00010003938) #18	ETNPPL (ENSRFEG00010003723) #19	OSTC (ENSRFEG00010003698) #20	ENSRFEG00010003688 #21	ENSRFEG00010003676	LEF1 (ENSRFEG00010003558) #22	CYP2U1 (ENSRFEG00010003430) #24	ENSRFEG00010003401	SGMS2 (ENSRFEG00010003389) #25	PAPSS1 (ENSRFEG00010003368) #26	DKK2 (ENSRFEG00010003271) #27	GIMD1 (ENSRFEG00010003248) #28	ENSRFEG00010003218 #29	TBCK (ENSRFEG00010003168) #30	NPNT (ENSRFEG00010003048) #31	GSTCD (ENSRFEG00010002920) #32	INTS12 (ENSRFEG00010002886) #33	ENSRFEG00010002852 #34	ENSRFEG00010002834 #34	ENSRFEG00010002822	PPA2 (ENSRFEG00010002712) #35
Microbat	MODERN SPECIES	1119															ENSMLUG00000025715	LEF1 (ENSMLUG00000008891) #22	HADH (ENSMLUG00000008844) #23	CYP2U1 (ENSMLUG00000008831) #24	SGMS2 (ENSMLUG00000000844) #25	PAPSS1 (ENSMLUG00000000837) #26	ENSMLUG00000002976	GIMD1 (ENSMLUG00000029629) #28	AIMP1 (ENSMLUG00000009560) #29	TBCK (ENSMLUG00000012409) #30	ENSMLUG00000027019	NPNT (ENSMLUG00000016107) #31	GSTCD (ENSMLUG00000007230) #32	ENSMLUG00000011757 #33	ENSMLUG00000025094 #34	ENSMLUG00000023068	ENSMLUG00000011747 #34
Atlantogenata	ANCESTRAL SPECIES	57	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.b #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Afrotheria	ANCESTRAL SPECIES	67	ENSGT00940000154340.A	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37	ENSGT00940000153745.b
Afrotheria_a	ANCESTRAL SPECIES	62	ENSGT00940000154340.A	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37	ENSGT00940000153745.b
Elephant	MODERN SPECIES	95	ENPEP (ENSLAFG00000008127)	ELOVL6 (ENSLAFG00000021532) #7	EGF (ENSLAFG00000013803) #8	LRIT3 (ENSLAFG00000009373) #9	RRH (ENSLAFG00000009369) #10	CFI (ENSLAFG00000011698) #12	PLA2G12A (ENSLAFG00000000852) #13	CASP6 (ENSLAFG00000002727) #14	MCUB (ENSLAFG00000002726) #15	SEC24B (ENSLAFG00000013688) #16	ENSLAFG00000008674 #18	ETNPPL (ENSLAFG00000008666) #19	OSTC (ENSLAFG00000026381) #20	RPL34 (ENSLAFG00000032615) ##21	ENSLAFG00000025607	LEF1 (ENSLAFG00000016434) #22	HADH (ENSLAFG00000016430) #23	CYP2U1 (ENSLAFG00000016424) #24	SGMS2 (ENSLAFG00000016422) #25	PAPSS1 (ENSLAFG00000018426) #26	DKK2 (ENSLAFG00000007133) #27	GIMD1 (ENSLAFG00000027733) #28	AIMP1 (ENSLAFG00000012639) #29	TBCK (ENSLAFG00000018410) #30	NPNT (ENSLAFG00000005763) #31	GSTCD (ENSLAFG00000021544) #32	INTS12 (ENSLAFG00000010076) #33	ENSLAFG00000031287 #34	ENSLAFG00000012329 #34	ENSLAFG00000026913 #36	CXXC4 (ENSLAFG00000030012) #37
Hyrax	MODERN SPECIES	2896																LEF1 (ENSPCAG00000012331) #22	HADH (ENSPCAG00000012217) #23
Tenrec	MODERN SPECIES	3527																LEF1 (ENSETEG00000018357) #22
Xenarthra	ANCESTRAL SPECIES	55	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223.b #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00730000111880	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Armadillo	MODERN SPECIES	3508	ENSDNOG00000040127	EGF (ENSDNOG00000008347) #8	ENSDNOG00000042412 #9	RRH (ENSDNOG00000031242) #10	GAR1 (ENSDNOG00000037632) #11	CFI (ENSDNOG00000012346) #12	ENSDNOG00000016573 #13	CASP6 (ENSDNOG00000016571) #14	MCUB (ENSDNOG00000016570) #15	SEC24B (ENSDNOG00000012980) #16	ENSDNOG00000048517	COL25A1 (ENSDNOG00000016800) #18	ETNPPL (ENSDNOG00000014825) #19	OSTC (ENSDNOG00000011172) #20	ENSDNOG00000011179 ##21	LEF1 (ENSDNOG00000019529) #22	HADH (ENSDNOG00000000868) #23	CYP2U1 (ENSDNOG00000000863) #24	SGMS2 (ENSDNOG00000048393) #25	ENSDNOG00000044160	PAPSS1 (ENSDNOG00000003032) #26	DKK2 (ENSDNOG00000039230) #27	ENSDNOG00000035061	GIMD1 (ENSDNOG00000037621) #28	AIMP1 (ENSDNOG00000039310) #29	TBCK (ENSDNOG00000010062) #30	ENSDNOG00000033067	NPNT (ENSDNOG00000047147) #31	GSTCD (ENSDNOG00000010872) #32	INTS12 (ENSDNOG00000041045) #33	ARHGEF38 (ENSDNOG00000031825) #34
Sloth	MODERN SPECIES	3231																LEF1 (ENSCHOG00000005968) #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000156946	ENSGT01050000244965.b.e #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000156946	ENSGT01050000244965.b.e #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Diprotodontia	ANCESTRAL SPECIES	43	ENSGT00940000156946	ENSGT01050000244965.b.e #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Diprotodontia_a	ANCESTRAL SPECIES	38	ENSGT00940000156946	ENSGT01050000244965.b.e.a #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376.cc #20	ENSGT00390000008294.f ##21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000162188 #27	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Common wonbat	MODERN SPECIES	1057	ENSVURG00010005176	ENSVURG00010005163 #7	EGF (ENSVURG00010005133) #8	LRIT3 (ENSVURG00010005124) #9	RRH (ENSVURG00010005113) #10	GAR1 (ENSVURG00010005078) #11	CFI (ENSVURG00010005029) #12	PLA2G12A (ENSVURG00010005003) #13	CASP6 (ENSVURG00010004981) #14	MCUB (ENSVURG00010004957) #15	SEC24B (ENSVURG00010004919) #16	COL25A1 (ENSVURG00010004195) #18	ETNPPL (ENSVURG00010004034) #19	ENSVURG00010004018 #20	ENSVURG00010004007 ##21	LEF1 (ENSVURG00010003819) #22	HADH (ENSVURG00010003794) #23	ENSVURG00010003762 #24	SGMS2 (ENSVURG00010003757) #25	PAPSS1 (ENSVURG00010003718) #26	DKK2 (ENSVURG00010003692) #27	GIMD1 (ENSVURG00010003641) #28	AIMP1 (ENSVURG00010003631) #29	TBCK (ENSVURG00010003587) #30	ENSVURG00010003557	NPNT (ENSVURG00010003491) #31	GSTCD (ENSVURG00010003450) #32	INTS12 (ENSVURG00010003413) #33	ENSVURG00010003405 #34	ENSVURG00010003395 #34	PPA2 (ENSVURG00010003352) #35
koala	MODERN SPECIES	90	ENSPCIG00000024155	ENSPCIG00000012381 #7	EGF (ENSPCIG00000014187) #8	LRIT3 (ENSPCIG00000018919) #9	RRH (ENSPCIG00000018914) #10	GAR1 (ENSPCIG00000018912) #11	CFI (ENSPCIG00000032256) #12	ENSPCIG00000009719 #14	MCUB (ENSPCIG00000007235) #15	SEC24B (ENSPCIG00000006450) #16	COL25A1 (ENSPCIG00000020507) #18	ETNPPL (ENSPCIG00000026559) #19	ENSPCIG00000026714 #20	ENSPCIG00000026709 ##21	ENSPCIG00000026707	LEF1 (ENSPCIG00000014900) #22	HADH (ENSPCIG00000030521) #23	CYP2U1 (ENSPCIG00000030523) #24	SGMS2 (ENSPCIG00000030524) #25	PAPSS1 (ENSPCIG00000032900) #26	DKK2 (ENSPCIG00000020791) #27
Wallaby	MODERN SPECIES	4637																LEF1 (ENSMEUG00000006871) #22
Tasmanian devil	MODERN SPECIES	5	GAR1 (ENSSHAG00000002161) #11	ENSSHAG00000024052 #10	CFI (ENSSHAG00000002786) #12	ENSSHAG00000004900 #14	MCUB (ENSSHAG00000005322) #15	SEC24B (ENSSHAG00000006487) #16	COL25A1 (ENSSHAG00000006570) #18	ENSSHAG00000029911 #20	ENSSHAG00000008320	ENSSHAG00000008658	ENSSHAG00000027128	ENSSHAG00000026968	ENSSHAG00000025927 ##21	ENSSHAG00000002342 #19	ENSSHAG00000027242 ##21	LEF1 (ENSSHAG00000028814) #22	HADH (ENSSHAG00000004987) #23	CYP2U1 (ENSSHAG00000005871) #24	SGMS2 (ENSSHAG00000006786) #25	PAPSS1 (ENSSHAG00000009182) #26	ENSSHAG00000024554	ENSSHAG00000013376	GIMD1 (ENSSHAG00000008117) #28	AIMP1 (ENSSHAG00000000796) #29	TBCK (ENSSHAG00000008473) #30	NPNT (ENSSHAG00000001094) #31	GSTCD (ENSSHAG00000000922) #32	INTS12 (ENSSHAG00000003546) #33	ARHGEF38 (ENSSHAG00000004498) #34	PPA2 (ENSSHAG00000032314) #35	TET2 (ENSSHAG00000008753) #36
Opossum	MODERN SPECIES	4	RASGEF1B (ENSMODG00000011880)	ENSMODG00000046459	HNRNPD (ENSMODG00000011898)	ENSMODG00000011905	ENSMODG00000011916	ENSMODG00000011924	TMEM150C (ENSMODG00000011930)	SCD5 (ENSMODG00000011983)	SEC31A (ENSMODG00000012053)	SEC24B (ENSMODG00000020587) #16	COL25A1 (ENSMODG00000020594) #18	ENSMODG00000020597 #19	OSTC (ENSMODG00000038026) #20	RPL34 (ENSMODG00000020601) ##21	ENSMODG00000049572	LEF1 (ENSMODG00000020603) #22	HADH (ENSMODG00000020605) #23	CYP2U1 (ENSMODG00000020607) #24	SGMS2 (ENSMODG00000047692) #25	PAPSS1 (ENSMODG00000020610) #26	DKK2 (ENSMODG00000020612) #27	GIMD1 (ENSMODG00000029257) #28	AIMP1 (ENSMODG00000020613) #29	TBCK (ENSMODG00000020615) #30	NPNT (ENSMODG00000020620) #31	GSTCD (ENSMODG00000020626) #32	ENSMODG00000051211	INTS12 (ENSMODG00000020627) #33	ARHGEF38 (ENSMODG00000020629) #34	ENSMODG00000044974	PPA2 (ENSMODG00000020635) #35
Platypus	MODERN SPECIES	3	ENSOANG00000050415	ENPEP (ENSOANG00000003669)	ELOVL6 (ENSOANG00000037661) #7	EGF (ENSOANG00000003668) #8	LRIT3 (ENSOANG00000003667) #9	RRH (ENSOANG00000003666) #10	GAR1 (ENSOANG00000003665) #11	CFI (ENSOANG00000003664) #12	PLA2G12A (ENSOANG00000039200) #13	CASP6 (ENSOANG00000003663) #14	MCUB (ENSOANG00000003662) #15	SEC24B (ENSOANG00000013878) #16	ETNPPL (ENSOANG00000009959) #19	OSTC (ENSOANG00000000770) #20	RPL34 (ENSOANG00000007856) #21	LEF1 (ENSOANG00000002638) #22	HADH (ENSOANG00000007748) #23	CYP2U1 (ENSOANG00000047928) #24	SGMS2 (ENSOANG00000037567) #25	PAPSS1 (ENSOANG00000007746) #26	DKK2 (ENSOANG00000043883) #27	ENSOANG00000002774 #29	TBCK (ENSOANG00000002772) #30	NPNT (ENSOANG00000002771) #31	GSTCD (ENSOANG00000036596) #32	INTS12 (ENSOANG00000048873) #33	ARHGEF38 (ENSOANG00000008038) #34	PPA2 (ENSOANG00000050616) #35	TET2 (ENSOANG00000045723) #36	CXXC4 (ENSOANG00000037582) #37	ENSOANG00000029349
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Laterata	ANCESTRAL SPECIES	9	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Argentine black and white tegu	MODERN SPECIES	11	ENPEP (ENSSMRG00000014677)	ELOVL6 (ENSSMRG00000014676) #7	EGF (ENSSMRG00000014673) #8	LRIT3 (ENSSMRG00000014672) #9	RRH (ENSSMRG00000014671) #10	GAR1 (ENSSMRG00000014670) #11	CFI (ENSSMRG00000014669) #12	PLA2G12A (ENSSMRG00000014668) #13	CASP6 (ENSSMRG00000014667) #14	MCUB (ENSSMRG00000014666) #15	SEC24B (ENSSMRG00000014665) #16	COL25A1 (ENSSMRG00000014662) #18	ETNPPL (ENSSMRG00000014660) #19	OSTC (ENSSMRG00000014659) #20	RPL34 (ENSSMRG00000014657) #21	LEF1 (ENSSMRG00000014653) #22	HADH (ENSSMRG00000014650) #23	CYP2U1 (ENSSMRG00000014648) #24	ENSSMRG00000014645 #25	ENSSMRG00000014644 #25	PAPSS1 (ENSSMRG00000014642) #26	ENSSMRG00000014639	GIMD1 (ENSSMRG00000014638) #28	AIMP1 (ENSSMRG00000014637) #29	TBCK (ENSSMRG00000014636) #30	NPNT (ENSSMRG00000014635) #31	GSTCD (ENSSMRG00000014634) #32	INTS12 (ENSSMRG00000014633) #33	ARHGEF38 (ENSSMRG00000014631) #34	PPA2 (ENSSMRG00000014630) #35	TET2 (ENSSMRG00000014629) #36
Common wall lizard	MODERN SPECIES	17	EGF (ENSPMRG00000009944) #8	LRIT3 (ENSPMRG00000009967) #9	RRH (ENSPMRG00000009972) #10	GAR1 (ENSPMRG00000009979) #11	CFI (ENSPMRG00000009990) #12	PLA2G12A (ENSPMRG00000010038) #13	ENSPMRG00000010044	CASP6 (ENSPMRG00000010049) #14	MCUB (ENSPMRG00000010057) #15	SEC24B (ENSPMRG00000010066) #16	ENSPMRG00000010073	ETNPPL (ENSPMRG00000010078) #19	ENSPMRG00000010084	OSTC (ENSPMRG00000010088) #20	RPL34 (ENSPMRG00000010091) #21	LEF1 (ENSPMRG00000010099) #22	HADH (ENSPMRG00000010116) #23	CYP2U1 (ENSPMRG00000010120) #24	ENSPMRG00000010126 #25	ENSPMRG00000010132 #25	PAPSS1 (ENSPMRG00000010139) #26	ENSPMRG00000010155	ENSPMRG00000010164	GIMD1 (ENSPMRG00000010172) #28	AIMP1 (ENSPMRG00000010179) #29	TBCK (ENSPMRG00000010184) #30	ENSPMRG00000010190	NPNT (ENSPMRG00000010192) #31	ENSPMRG00000010200 #32	INTS12 (ENSPMRG00000010205) #33	ARHGEF38 (ENSPMRG00000010211) #34
Toxicofera	ANCESTRAL SPECIES	12	ENSGT00940000154340.A	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Lizard	MODERN SPECIES	997																LEF1 (ENSACAG00000008050) #22	HADH (ENSACAG00000042868) #23	CYP2U1 (ENSACAG00000008194) #24	SGMS2 (ENSACAG00000008243) #25	ENSACAG00000040110	PAPSS1 (ENSACAG00000008271) #26	ENSACAG00000008330	ENSACAG00000035526	GIMD1 (ENSACAG00000021108) #28	ENSACAG00000000310
Elapidae	ANCESTRAL SPECIES	11	ENSGT00940000154340.A	ENSGT00940000156946.c	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.c #35	ENSGT00390000017004.a.a.d #35
Elapidae_a	ANCESTRAL SPECIES	13	ENSGT00940000154340.A	ENSGT00940000156946.c	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.c #35	ENSGT00390000017004.a.a.d #35
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT00940000154340.A	ENSGT00940000156946.c	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000169429	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.d #35	ENSGT00940000160003 #36
Mainland tiger snake	MODERN SPECIES	24	FAM241A (ENSNSUG00000003912)	ENSNSUG00000003911	ENPEP (ENSNSUG00000003744)	ELOVL6 (ENSNSUG00000003740) #7	ENSNSUG00000003739 #8	LRIT3 (ENSNSUG00000003735) #9	RRH (ENSNSUG00000003731) #10	GAR1 (ENSNSUG00000003730) #11	CFI (ENSNSUG00000003719) #12	PLA2G12A (ENSNSUG00000003717) #13	CASP6 (ENSNSUG00000003715) #14	MCUB (ENSNSUG00000003712) #15	SEC24B (ENSNSUG00000003701) #16	ETNPPL (ENSNSUG00000003698) #19	OSTC (ENSNSUG00000003694) #20	LEF1 (ENSNSUG00000003686) #22	ENSNSUG00000003683	CYP2U1 (ENSNSUG00000003680) #24	SGMS2 (ENSNSUG00000003678) #25	PAPSS1 (ENSNSUG00000003676) #26	ENSNSUG00000003675	GIMD1 (ENSNSUG00000003674) #28	AIMP1 (ENSNSUG00000003673) #29	TBCK (ENSNSUG00000003442) #30	NPNT (ENSNSUG00000003292) #31	GSTCD (ENSNSUG00000003291) #32	INTS12 (ENSNSUG00000003290) #33	ARHGEF38 (ENSNSUG00000003289) #34	PPA2 (ENSNSUG00000003288) #35	TET2 (ENSNSUG00000003286) #36	CXXC4 (ENSNSUG00000003285) #37
Eastern brown snake	MODERN SPECIES	9	ENSPTXG00000007899	ENPEP (ENSPTXG00000007905)	ELOVL6 (ENSPTXG00000007933) #7	EGF (ENSPTXG00000007934) #8	LRIT3 (ENSPTXG00000007938) #9	RRH (ENSPTXG00000007940) #10	GAR1 (ENSPTXG00000007942) #11	CFI (ENSPTXG00000007945) #12	PLA2G12A (ENSPTXG00000007947) #13	CASP6 (ENSPTXG00000007949) #14	MCUB (ENSPTXG00000007950) #15	SEC24B (ENSPTXG00000007954) #16	ETNPPL (ENSPTXG00000008058) #19	OSTC (ENSPTXG00000008062) #20	RPL34 (ENSPTXG00000008064) #21	LEF1 (ENSPTXG00000008066) #22	ENSPTXG00000008067	CYP2U1 (ENSPTXG00000008068) #24	SGMS2 (ENSPTXG00000008070) #25	PAPSS1 (ENSPTXG00000008074) #26	ENSPTXG00000008077	GIMD1 (ENSPTXG00000008078) #28	AIMP1 (ENSPTXG00000008081) #29	ENSPTXG00000008082	TBCK (ENSPTXG00000008085) #30	NPNT (ENSPTXG00000008095) #31	GSTCD (ENSPTXG00000008614) #32	INTS12 (ENSPTXG00000008617) #33	ARHGEF38 (ENSPTXG00000008618) #34	PPA2 (ENSPTXG00000008621) #35	TET2 (ENSPTXG00000008622) #36
Blue-lipped sea krait	MODERN SPECIES	5053																LEF1 (ENSLLTG00000008846) #22
Indian cobra	MODERN SPECIES	3	ENSNNAG00000003947	ENPEP (ENSNNAG00000003920)	ELOVL6 (ENSNNAG00000003899) #7	ENSNNAG00000003870 #8	LRIT3 (ENSNNAG00000003773) #9	RRH (ENSNNAG00000003727) #10	GAR1 (ENSNNAG00000003702) #11	CFI (ENSNNAG00000003639) #12	PLA2G12A (ENSNNAG00000003618) #13	CASP6 (ENSNNAG00000003598) #14	MCUB (ENSNNAG00000003567) #15	SEC24B (ENSNNAG00000003515) #16	ETNPPL (ENSNNAG00000003409) #19	OSTC (ENSNNAG00000003381) #20	RPL34 (ENSNNAG00000003366) #21	LEF1 (ENSNNAG00000003356) #22	ENSNNAG00000003350	CYP2U1 (ENSNNAG00000003344) #24	SGMS2 (ENSNNAG00000003337) #25	PAPSS1 (ENSNNAG00000003306) #26	ENSNNAG00000003290	GIMD1 (ENSNNAG00000003282) #28	AIMP1 (ENSNNAG00000003269) #29	TBCK (ENSNNAG00000003225) #30	NPNT (ENSNNAG00000003194) #31	GSTCD (ENSNNAG00000003145) #32	INTS12 (ENSNNAG00000003130) #33	ARHGEF38 (ENSNNAG00000003099) #34	PPA2 (ENSNNAG00000003077) #35	CXXC4 (ENSNNAG00000003015) #37	TACR3 (ENSNNAG00000003004)
tuatara	MODERN SPECIES	1600														ETNPPL (ENSSPUG00000006082) #19	RPL34 (ENSSPUG00000006146) #21	LEF1 (ENSSPUG00000006167) #22	HADH (ENSSPUG00000006189) #23	CYP2U1 (ENSSPUG00000006202) #24	SGMS2 (ENSSPUG00000006211) #25	PAPSS1 (ENSSPUG00000006249) #26	ENSSPUG00000006344	GIMD1 (ENSSPUG00000006363) #28	AIMP1 (ENSSPUG00000006369) #29	TBCK (ENSSPUG00000006390) #30	NPNT (ENSSPUG00000006436) #31	GSTCD (ENSSPUG00000006461) #32	INTS12 (ENSSPUG00000006494) #33	ARHGEF38 (ENSSPUG00000006509) #34	ENSSPUG00000006574 #35
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.r.a #34	ENSGT00950000183088.a.b.b.r.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.r.a #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Testudinidae	ANCESTRAL SPECIES	48	ENSGT00940000162789	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.r.a #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Goode s thornscrub tortoise	MODERN SPECIES	19	PITX2 (ENSGEVG00005008234)	ENPEP (ENSGEVG00005008043)	ELOVL6 (ENSGEVG00005007959) #7	EGF (ENSGEVG00005007764) #8	LRIT3 (ENSGEVG00005007701) #9	RRH (ENSGEVG00005007666) #10	GAR1 (ENSGEVG00005007631) #11	CFI (ENSGEVG00005007533) #12	PLA2G12A (ENSGEVG00005007490) #13	CASP6 (ENSGEVG00005007463) #14	MCUB (ENSGEVG00005007424) #15	SEC24B (ENSGEVG00005007321) #16	ETNPPL (ENSGEVG00005007272) #19	OSTC (ENSGEVG00005007256) #20	ENSGEVG00005007233 #21	LEF1 (ENSGEVG00005007186) #22	HADH (ENSGEVG00005007166) #23	CYP2U1 (ENSGEVG00005007136) #24	SGMS2 (ENSGEVG00005007106) #25	ENSGEVG00005007089	PAPSS1 (ENSGEVG00005007065) #26	ENSGEVG00005007040	GIMD1 (ENSGEVG00005007017) #28	AIMP1 (ENSGEVG00005007001) #29	TBCK (ENSGEVG00005006897) #30	NPNT (ENSGEVG00005006753) #31	GSTCD (ENSGEVG00005006702) #32	INTS12 (ENSGEVG00005006679) #33	ARHGEF38 (ENSGEVG00005006538) #34	PPA2 (ENSGEVG00005006493) #35	TET2 (ENSGEVG00005006468) #36
Abingdon island giant tortoise	MODERN SPECIES	2210													ETNPPL (ENSCABG00000003995) #19	OSTC (ENSCABG00000003993) #20	RPL34 (ENSCABG00000003992) #21	LEF1 (ENSCABG00000003989) #22	HADH (ENSCABG00000003985) #23	ENSCABG00000003981 #24	ENSCABG00000003979 #24	SGMS2 (ENSCABG00000003935) #25	PAPSS1 (ENSCABG00000003928) #26	ENSCABG00000003901
Emydidae	ANCESTRAL SPECIES	27	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.r.a #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
painted turtle	MODERN SPECIES	734	ENPEP (ENSCPBG00000004492)	ELOVL6 (ENSCPBG00000004435) #7	EGF (ENSCPBG00000004365) #8	LRIT3 (ENSCPBG00000004330) #9	RRH (ENSCPBG00000004318) #10	GAR1 (ENSCPBG00000004310) #11	CFI (ENSCPBG00000004299) #12	PLA2G12A (ENSCPBG00000004295) #13	CASP6 (ENSCPBG00000004284) #14	MCUB (ENSCPBG00000004264) #15	SEC24B (ENSCPBG00000004242) #16	COL25A1 (ENSCPBG00000004206) #18	ETNPPL (ENSCPBG00000004186) #19	OSTC (ENSCPBG00000004175) #20	ENSCPBG00000004169 #21	LEF1 (ENSCPBG00000004144) #22	HADH (ENSCPBG00000004120) #23	CYP2U1 (ENSCPBG00000004111) #24	SGMS2 (ENSCPBG00000004101) #25	PAPSS1 (ENSCPBG00000004089) #26	ENSCPBG00000004086	GIMD1 (ENSCPBG00000004061) #28	AIMP1 (ENSCPBG00000004055) #29	TBCK (ENSCPBG00000004022) #30	NPNT (ENSCPBG00000003979) #31	GSTCD (ENSCPBG00000003951) #32	INTS12 (ENSCPBG00000003933) #33	ARHGEF38 (ENSCPBG00000003893) #34	PPA2 (ENSCPBG00000003833) #35	TET2 (ENSCPBG00000003794) #36	TACR3 (ENSCPBG00000003765)
Three-toed box turtle	MODERN SPECIES	342	PITX2 (ENSTMTG00000006149)	ENPEP (ENSTMTG00000006011)	ELOVL6 (ENSTMTG00000005943) #7	EGF (ENSTMTG00000005749) #8	LRIT3 (ENSTMTG00000005703) #9	RRH (ENSTMTG00000005677) #10	GAR1 (ENSTMTG00000005660) #11	CFI (ENSTMTG00000005611) #12	PLA2G12A (ENSTMTG00000005595) #13	CASP6 (ENSTMTG00000005578) #14	MCUB (ENSTMTG00000005556) #15	SEC24B (ENSTMTG00000005496) #16	ETNPPL (ENSTMTG00000005409) #19	OSTC (ENSTMTG00000005398) #20	RPL34 (ENSTMTG00000005392) #21	LEF1 (ENSTMTG00000005361) #22	HADH (ENSTMTG00000005338) #23	CYP2U1 (ENSTMTG00000005320) #24	SGMS2 (ENSTMTG00000005298) #25	PAPSS1 (ENSTMTG00000005263) #26	ENSTMTG00000005248	GIMD1 (ENSTMTG00000005235) #28	AIMP1 (ENSTMTG00000005223) #29	TBCK (ENSTMTG00000005164) #30	NPNT (ENSTMTG00000005130) #31	GSTCD (ENSTMTG00000005116) #32	INTS12 (ENSTMTG00000005095) #33	ARHGEF38 (ENSTMTG00000004983) #34	PPA2 (ENSTMTG00000004947) #35	TET2 (ENSTMTG00000004910) #36	CXXC4 (ENSTMTG00000004895) #37
Chinese turtle	MODERN SPECIES	773	ENSPSIG00000002933 #9	ENSPSIG00000002945 #9	RRH (ENSPSIG00000002949) #10	GAR1 (ENSPSIG00000002970) #11	CFI (ENSPSIG00000002999) #12	PLA2G12A (ENSPSIG00000003038) #13	CASP6 (ENSPSIG00000003046) #14	MCUB (ENSPSIG00000003056) #15	SEC24B (ENSPSIG00000003064) #16	ENSPSIG00000003097 ##16	ENSPSIG00000003108	COL25A1 (ENSPSIG00000003115) #18	ETNPPL (ENSPSIG00000003262) #19	OSTC (ENSPSIG00000003294) #20	RPL34 (ENSPSIG00000003295) #21	LEF1 (ENSPSIG00000003298) #22	HADH (ENSPSIG00000006107) #23	CYP2U1 (ENSPSIG00000006117) #24	SGMS2 (ENSPSIG00000006475) #25	PAPSS1 (ENSPSIG00000006485) #26	ENSPSIG00000006494	GIMD1 (ENSPSIG00000006519) #28	AIMP1 (ENSPSIG00000006524) #29	TBCK (ENSPSIG00000007012) #30	NPNT (ENSPSIG00000007724) #31	GSTCD (ENSPSIG00000008410) #32	INTS12 (ENSPSIG00000009507) #33	PPA2 (ENSPSIG00000009817) #35	ENSPSIG00000010260 #34	ENSPSIG00000010263 #34	TET2 (ENSPSIG00000010562) #36
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Aves	ANCESTRAL SPECIES	3	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00530000064550.A	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278.a	ENSGT01100000263502.B.a.b	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Japanese quail	MODERN SPECIES	22	FAM13A (ENSCJPG00005008999)	GPRIN3 (ENSCJPG00005009003)	SNCA (ENSCJPG00005009007)	MMRN1 (ENSCJPG00005009008)	CCSER1 (ENSCJPG00005009015)	GRID2 (ENSCJPG00005009021)	ENSCJPG00005009022	SMARCAD1 (ENSCJPG00005009024)	HPGDS (ENSCJPG00005009025)	ENSCJPG00005009029	SEC24B (ENSCJPG00005009031) #16	COL25A1 (ENSCJPG00005009531) #18	ETNPPL (ENSCJPG00005009532) #19	OSTC (ENSCJPG00005009533) #20	RPL34 (ENSCJPG00005009534) #21	LEF1 (ENSCJPG00005009539) #22	HADH (ENSCJPG00005009540) #23	CYP2U1 (ENSCJPG00005009541) #24	SGMS2 (ENSCJPG00005009542) #25	PAPSS1 (ENSCJPG00005009544) #26	ENSCJPG00005009546	GIMD1 (ENSCJPG00005009549) #28	AIMP1 (ENSCJPG00005009550) #29	TBCK (ENSCJPG00005009551) #30	NPNT (ENSCJPG00005009552) #31	GSTCD (ENSCJPG00005009576) #32	INTS12 (ENSCJPG00005009577) #33	ARHGEF38 (ENSCJPG00005009579) #34	PPA2 (ENSCJPG00005009581) #35	TET2 (ENSCJPG00005009585) #36	CXXC4 (ENSCJPG00005009588) #37
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00950000183033.a.b.a	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00530000064550.A	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278.a	ENSGT01100000263502.B.a.b	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b.e #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Chicken	MODERN SPECIES	33	FAM13A (ENSGALG00010008290)	GPRIN3 (ENSGALG00010008320)	SNCA (ENSGALG00010008368)	MMRN1 (ENSGALG00010008376)	CCSER1 (ENSGALG00010008488)	ENSGALG00010005643	GRID2 (ENSGALG00010009069)	Atoh1 (ENSGALG00010008510)	SMARCAD1 (ENSGALG00010005512)	HPGDS (ENSGALG00010005518)	OPN4-1 (ENSGALG00010005533)	SEC24B (ENSGALG00010005692) #16	COL25A1 (ENSGALG00010005720) #18	ETNPPL (ENSGALG00010005743) #19	RPL34 (ENSGALG00010005545) #21	LEF1 (ENSGALG00010005587) #22	HADH (ENSGALG00010005634) #23	CYP2U1 (ENSGALG00010005656) #24	SGMS2 (ENSGALG00010005670) #25	PAPSS1 (ENSGALG00010005915) #26	DKK2 (ENSGALG00010005985)	GIMD1 (ENSGALG00010006011) #28	AIMP1 (ENSGALG00010006049) #29	TBCK (ENSGALG00010006077) #30	ENSGALG00010006082	NPNT (ENSGALG00010006118) #31	GSTCD (ENSGALG00010006200) #32	INTS12 (ENSGALG00010006229) #33	ARHGEF38 (ENSGALG00010006243) #34	PPA2 (ENSGALG00010006259) #35	TET2 (ENSGALG00010005756) #36
Turkey	MODERN SPECIES	24	ENSMGAG00000016688 #34	ENSMGAG00000006026 #33	ENSMGAG00000017109 #32	ENSMGAG00000006011 #32	ENSMGAG00000005988 #31	ENSMGAG00000005932 #30	ENSMGAG00000022936	ENSMGAG00000005915 #28	ENSMGAG00000005919 #29	ENSMGAG00000005911	ENSMGAG00000005884 #26	ENSMGAG00000022454 #26	ENSMGAG00000005865 #25	ENSMGAG00000005823 #24	ENSMGAG00000005795 #23	ENSMGAG00000005753 #22	ENSMGAG00000018344 #21	ENSMGAG00000002597 #21	ENSMGAG00000016418 #20	ENSMGAG00000005718 #19	ENSMGAG00000005707 #18	ENSMGAG00000005671 #16	ENSMGAG00000005644	ENSMGAG00000005610	ENSMGAG00000005577	ENSMGAG00000017217	ENSMGAG00000017561	EPHA5 (ENSMGAG00000010233)	ENSMGAG00000010297	STAP1 (ENSMGAG00000010313)	UBA6 (ENSMGAG00000010345)
Anatidae	DUPLICATION
Anatidae	ANCESTRAL SPECIES	46	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660.a #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Pink-footed goose	MODERN SPECIES	100				LRIT3 (ENSABRG00000007348) #9	RRH (ENSABRG00000007353) #10	GAR1 (ENSABRG00000007360) #11	CFI (ENSABRG00000007362) #12	PLA2G12A (ENSABRG00000007378) #13	CASP6 (ENSABRG00000007392) #14	MCUB (ENSABRG00000007403) #15	SEC24B (ENSABRG00000007477) #16	COL25A1 (ENSABRG00000007508) #18	ETNPPL (ENSABRG00000007533) #19	OSTC (ENSABRG00000007554) #20	RPL34 (ENSABRG00000007557) #21	LEF1 (ENSABRG00000007589) #22	HADH (ENSABRG00000007612) #23	CYP2U1 (ENSABRG00000007628) #24	SGMS2 (ENSABRG00000007633) #25	PAPSS1 (ENSABRG00000007642) #26	ENSABRG00000007658	GIMD1 (ENSABRG00000007677) #28	AIMP1 (ENSABRG00000007685) #29	TBCK (ENSABRG00000007689) #30	NPNT (ENSABRG00000007707) #31	GSTCD (ENSABRG00000007735) #32	INTS12 (ENSABRG00000007747) #33	ARHGEF38 (ENSABRG00000007763) #34	PPA2 (ENSABRG00000007797) #35	TET2 (ENSABRG00000007809) #36	CXXC4 (ENSABRG00000007827) #37
Duck	MODERN SPECIES	22	ELOVL6 (ENSAPLG00000012370) #7	EGF (ENSAPLG00000011867) #8	LRIT3 (ENSAPLG00000030537) #9	RRH (ENSAPLG00000010998) #10	GAR1 (ENSAPLG00000010926) #11	CFI (ENSAPLG00000010778) #12	PLA2G12A (ENSAPLG00000010690) #13	CASP6 (ENSAPLG00000010415) #14	MCUB (ENSAPLG00000010215) #15	SEC24B (ENSAPLG00000009250) #16	COL25A1 (ENSAPLG00000008681) #18	ETNPPL (ENSAPLG00000008156) #19	OSTC (ENSAPLG00000021135) #20	RPL34 (ENSAPLG00000008019) #21	ENSAPLG00000007492 #22	ENSAPLG00000028119 #22	HADH (ENSAPLG00000007402) #23	CYP2U1 (ENSAPLG00000007095) #24	SGMS2 (ENSAPLG00000007057) #25	PAPSS1 (ENSAPLG00000006191) #26	ENSAPLG00000006144	GIMD1 (ENSAPLG00000006141) #28	AIMP1 (ENSAPLG00000006022) #29	TBCK (ENSAPLG00000005181) #30	NPNT (ENSAPLG00000004656) #31	GSTCD (ENSAPLG00000016467) #32	INTS12 (ENSAPLG00000010592) #33	ARHGEF38 (ENSAPLG00000010561) #34	PPA2 (ENSAPLG00000010174) #35	TET2 (ENSAPLG00000008329) #36	CXXC4 (ENSAPLG00000027306) #37
Anatidae	ANCESTRAL SPECIES																	ENSGT00940000159660.b #22
Duck	MODERN SPECIES	22	ENPEP (ENSAPLG00000012392)	ELOVL6 (ENSAPLG00000012370) #7	EGF (ENSAPLG00000011867) #8	LRIT3 (ENSAPLG00000030537) #9	RRH (ENSAPLG00000010998) #10	GAR1 (ENSAPLG00000010926) #11	CFI (ENSAPLG00000010778) #12	PLA2G12A (ENSAPLG00000010690) #13	CASP6 (ENSAPLG00000010415) #14	MCUB (ENSAPLG00000010215) #15	SEC24B (ENSAPLG00000009250) #16	COL25A1 (ENSAPLG00000008681) #18	ETNPPL (ENSAPLG00000008156) #19	OSTC (ENSAPLG00000021135) #20	RPL34 (ENSAPLG00000008019) #21	ENSAPLG00000007492 #22	ENSAPLG00000028119 #22	HADH (ENSAPLG00000007402) #23	CYP2U1 (ENSAPLG00000007095) #24	SGMS2 (ENSAPLG00000007057) #25	PAPSS1 (ENSAPLG00000006191) #26	ENSAPLG00000006144	GIMD1 (ENSAPLG00000006141) #28	AIMP1 (ENSAPLG00000006022) #29	TBCK (ENSAPLG00000005181) #30	NPNT (ENSAPLG00000004656) #31	GSTCD (ENSAPLG00000016467) #32	INTS12 (ENSAPLG00000010592) #33	ARHGEF38 (ENSAPLG00000010561) #34	PPA2 (ENSAPLG00000010174) #35	TET2 (ENSAPLG00000008329) #36
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Golden eagle	MODERN SPECIES		PITX2 (ENSACCG00020006594)	ENPEP (ENSACCG00020006567)	ELOVL6 (ENSACCG00020006546) #7	EGF (ENSACCG00020006492) #8	LRIT3 (ENSACCG00020006454) #9	RRH (ENSACCG00020006435) #10	GAR1 (ENSACCG00020006422) #11	CFI (ENSACCG00020006407) #12	PLA2G12A (ENSACCG00020006404) #13	CASP6 (ENSACCG00020006394) #14	MCUB (ENSACCG00020006386) #15	SEC24B (ENSACCG00020006353) #16	ETNPPL (ENSACCG00020006332) #19	OSTC (ENSACCG00020006320) #20	RPL34 (ENSACCG00020006312) #21	LEF1 (ENSACCG00020006283) #22	HADH (ENSACCG00020006255) #23	CYP2U1 (ENSACCG00020006246) #24	SGMS2 (ENSACCG00020006231) #25	PAPSS1 (ENSACCG00020006217) #26	ENSACCG00020006201	GIMD1 (ENSACCG00020006194) #28	AIMP1 (ENSACCG00020006181) #29	TBCK (ENSACCG00020006148) #30	NPNT (ENSACCG00020006122) #31	GSTCD (ENSACCG00020006099) #32	INTS12 (ENSACCG00020006090) #33	ARHGEF38 (ENSACCG00020006057) #34	PPA2 (ENSACCG00020006024) #35	TET2 (ENSACCG00020005989) #36	CXXC4 (ENSACCG00020005978) #37
Kakapo	MODERN SPECIES	24	ENPEP (ENSSHBG00005011623)	ELOVL6 (ENSSHBG00005011604) #7	EGF (ENSSHBG00005011545) #8	LRIT3 (ENSSHBG00005011508) #9	RRH (ENSSHBG00005011482) #10	GAR1 (ENSSHBG00005011464) #11	CFI (ENSSHBG00005011356) #12	PLA2G12A (ENSSHBG00005011219) #13	CASP6 (ENSSHBG00005011178) #14	MCUB (ENSSHBG00005011137) #15	SEC24B (ENSSHBG00005011081) #16	COL25A1 (ENSSHBG00005011021) #18	ETNPPL (ENSSHBG00005010971) #19	OSTC (ENSSHBG00005010930) #20	RPL34 (ENSSHBG00005010895) #21	LEF1 (ENSSHBG00005010852) #22	HADH (ENSSHBG00005010832) #23	CYP2U1 (ENSSHBG00005010804) #24	SGMS2 (ENSSHBG00005010783) #25	PAPSS1 (ENSSHBG00005010739) #26	ENSSHBG00005010694	GIMD1 (ENSSHBG00005010674) #28	AIMP1 (ENSSHBG00005010644) #29	ENSSHBG00005010618	TBCK (ENSSHBG00005010559) #30	NPNT (ENSSHBG00005010438) #31	GSTCD (ENSSHBG00005010413) #32	INTS12 (ENSSHBG00005010390) #33	ARHGEF38 (ENSSHBG00005010293) #34	PPA2 (ENSSHBG00005010232) #35	TET2 (ENSSHBG00005000703) #36
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Great tit	MODERN SPECIES	23	ENPEP (ENSPMJG00000010139)	ELOVL6 (ENSPMJG00000010137) #7	EGF (ENSPMJG00000010116) #8	LRIT3 (ENSPMJG00000010115) #9	RRH (ENSPMJG00000010113) #10	GAR1 (ENSPMJG00000010111) #11	CFI (ENSPMJG00000010109) #12	PLA2G12A (ENSPMJG00000010108) #13	CASP6 (ENSPMJG00000010107) #14	MCUB (ENSPMJG00000010106) #15	SEC24B (ENSPMJG00000010105) #16	COL25A1 (ENSPMJG00000010085) #18	ETNPPL (ENSPMJG00000010084) #19	OSTC (ENSPMJG00000010082) #20	RPL34 (ENSPMJG00000010081) #21	LEF1 (ENSPMJG00000010067) #22	ENSPMJG00000010064	CYP2U1 (ENSPMJG00000010059) #24	SGMS2 (ENSPMJG00000010046) #25	PAPSS1 (ENSPMJG00000010017) #26	ENSPMJG00000010015	GIMD1 (ENSPMJG00000010008) #28	AIMP1 (ENSPMJG00000010006) #29	TBCK (ENSPMJG00000010004) #30	NPNT (ENSPMJG00000010003) #31	GSTCD (ENSPMJG00000009970) #32	INTS12 (ENSPMJG00000009965) #33	ARHGEF38 (ENSPMJG00000009963) #34	PPA2 (ENSPMJG00000009960) #35	TET2 (ENSPMJG00000009958) #36	TACR3 (ENSPMJG00000009850)
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q.d #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Flycatcher	MODERN SPECIES	22	CISD2 (ENSFALG00000008179)	ENSFALG00000008189	BDH2 (ENSFALG00000023837)	ENSFALG00000008215	ENSFALG00000008224	TACR3 (ENSFALG00000008232)	TET2 (ENSFALG00000008241) #36	PPA2 (ENSFALG00000008246) #35	ARHGEF38 (ENSFALG00000008256) #34	INTS12 (ENSFALG00000008263) #33	GSTCD (ENSFALG00000008271) #32	COL25A1 (ENSFALG00000012208) #18	ETNPPL (ENSFALG00000012226) #19	OSTC (ENSFALG00000012230) #20	RPL34 (ENSFALG00000012235) #21	LEF1 (ENSFALG00000012250) #22	HADH (ENSFALG00000012296) #23	SGMS2 (ENSFALG00000012322) #25	PAPSS1 (ENSFALG00000012333) #26	ENSFALG00000026925	GIMD1 (ENSFALG00000012345) #28	AIMP1 (ENSFALG00000012349) #29	TBCK (ENSFALG00000012364) #30	NPNT (ENSFALG00000012382) #31	SEC24B (ENSFALG00000006389) #16	MCUB (ENSFALG00000024811) #15	CASP6 (ENSFALG00000025277) #14	PLA2G12A (ENSFALG00000023889) #13	CFI (ENSFALG00000006443) #12	GAR1 (ENSFALG00000024007) #11	RRH (ENSFALG00000006451) #10
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q.d #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00940000156946	ENSGT01050000244965.b #7	ENSGT00940000158366 #8	ENSGT00940000156627 #9	ENSGT01100000263524.I #10	ENSGT00730000111223 #11	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b.q.d #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Zebra finch	MODERN SPECIES	25	ENPEP (ENSTGUG00000004244)	ELOVL6 (ENSTGUG00000027644) #7	EGF (ENSTGUG00000004206) #8	LRIT3 (ENSTGUG00000020459) #9	RRH (ENSTGUG00000004188) #10	GAR1 (ENSTGUG00000020041) #11	CFI (ENSTGUG00000004171) #12	PLA2G12A (ENSTGUG00000004164) #13	CASP6 (ENSTGUG00000004148) #14	MCUB (ENSTGUG00000004134) #15	SEC24B (ENSTGUG00000004095) #16	COL25A1 (ENSTGUG00000004089) #18	ETNPPL (ENSTGUG00000004067) #19	OSTC (ENSTGUG00000004065) #20	RPL34 (ENSTGUG00000027399) #21	LEF1 (ENSTGUG00000004013) #22	HADH (ENSTGUG00000004004) #23	CYP2U1 (ENSTGUG00000003983) #24	SGMS2 (ENSTGUG00000003967) #25	PAPSS1 (ENSTGUG00000003942) #26	ENSTGUG00000029730	GIMD1 (ENSTGUG00000003930) #28	AIMP1 (ENSTGUG00000003915) #29	TBCK (ENSTGUG00000003881) #30	NPNT (ENSTGUG00000003842) #31	ENSTGUG00000026067	ENSTGUG00000026761	GSTCD (ENSTGUG00000003836) #32	INTS12 (ENSTGUG00000003817) #33	ARHGEF38 (ENSTGUG00000003812) #34	PPA2 (ENSTGUG00000025216) #35
Common canary	MODERN SPECIES	2	ENSSCAG00000012613	ENPEP (ENSSCAG00000012681)	ELOVL6 (ENSSCAG00000012933) #7	EGF (ENSSCAG00000012953) #8	LRIT3 (ENSSCAG00000012969) #9	RRH (ENSSCAG00000012977) #10	GAR1 (ENSSCAG00000012982) #11	CFI (ENSSCAG00000012987) #12	PLA2G12A (ENSSCAG00000012993) #13	CASP6 (ENSSCAG00000012997) #14	MCUB (ENSSCAG00000013002) #15	SEC24B (ENSSCAG00000013014) #16	ETNPPL (ENSSCAG00000013044) #19	OSTC (ENSSCAG00000013047) #20	RPL34 (ENSSCAG00000013050) #21	LEF1 (ENSSCAG00000013077) #22	CYP2U1 (ENSSCAG00000013091) #24	SGMS2 (ENSSCAG00000013099) #25	PAPSS1 (ENSSCAG00000013105) #26	ENSSCAG00000013111	GIMD1 (ENSSCAG00000013123) #28	AIMP1 (ENSSCAG00000013125) #29	TBCK (ENSSCAG00000013134) #30	NPNT (ENSSCAG00000013160) #31	GSTCD (ENSSCAG00000013167) #32	INTS12 (ENSSCAG00000013177) #33	ENSSCAG00000013186 #34	ENSSCAG00000013198 #34	PPA2 (ENSSCAG00000013205) #35	TET2 (ENSSCAG00000013213) #36	TACR3 (ENSSCAG00000013222)
Medium ground finch	MODERN SPECIES	7	PITX2 (ENSGFOG00000011136)	ENPEP (ENSGFOG00000011164)	ELOVL6 (ENSGFOG00000011480) #7	EGF (ENSGFOG00000011534) #8	LRIT3 (ENSGFOG00000012104) #9	RRH (ENSGFOG00000012109) #10	GAR1 (ENSGFOG00000012115) #11	CFI (ENSGFOG00000012121) #12	PLA2G12A (ENSGFOG00000012129) #13	CASP6 (ENSGFOG00000012134) #14	MCUB (ENSGFOG00000012138) #15	SEC24B (ENSGFOG00000012147) #16	ETNPPL (ENSGFOG00000012184) #19	OSTC (ENSGFOG00000012196) #20	RPL34 (ENSGFOG00000012200) #21	LEF1 (ENSGFOG00000012203) #22	HADH (ENSGFOG00000012208) #23	CYP2U1 (ENSGFOG00000012213) #24	SGMS2 (ENSGFOG00000012216) #25	PAPSS1 (ENSGFOG00000012235) #26	ENSGFOG00000012253	GIMD1 (ENSGFOG00000012254) #28	AIMP1 (ENSGFOG00000002541) #29	TBCK (ENSGFOG00000002555) #30	NPNT (ENSGFOG00000002601) #31	GSTCD (ENSGFOG00000002645) #32	INTS12 (ENSGFOG00000002668) #33	ARHGEF38 (ENSGFOG00000002702) #34	PPA2 (ENSGFOG00000002788) #35	TET2 (ENSGFOG00000002809) #36	TACR3 (ENSGFOG00000002819)
African ostrich	MODERN SPECIES	1080											SEC24B (ENSSCUG00000015606) #16	COL25A1 (ENSSCUG00000015582) #18	ETNPPL (ENSSCUG00000015569) #19	OSTC (ENSSCUG00000015564) #20	RPL34 (ENSSCUG00000015556) #21	LEF1 (ENSSCUG00000015548) #22	HADH (ENSSCUG00000015545) #23	CYP2U1 (ENSSCUG00000015541) #24	SGMS2 (ENSSCUG00000015538) #25	PAPSS1 (ENSSCUG00000015430) #26	ENSSCUG00000015290	GIMD1 (ENSSCUG00000015282) #28	AIMP1 (ENSSCUG00000015278) #29	TBCK (ENSSCUG00000015266) #30	NPNT (ENSSCUG00000015257) #31	GSTCD (ENSSCUG00000015252) #32	INTS12 (ENSSCUG00000015251) #33	ARHGEF38 (ENSSCUG00000015247) #34	PPA2 (ENSSCUG00000015240) #35	TET2 (ENSSCUG00000015236) #36	TACR3 (ENSSCUG00000015225)
Australian saltwater crocodile	MODERN SPECIES	32	PITX1 (ENSCPRG00005005301)	ENPEP (ENSCPRG00005005325)	ELOVL6 (ENSCPRG00005005580) #7	EGF (ENSCPRG00005005601) #8	LRIT3 (ENSCPRG00005005617) #9	ENSCPRG00005005622	GAR1 (ENSCPRG00005005627) #11	CFI (ENSCPRG00005005629) #12	PLA2G12A (ENSCPRG00005005654) #13	CASP6 (ENSCPRG00005005656) #14	MCUB (ENSCPRG00005005669) #15	SEC24B (ENSCPRG00005005675) #16	ETNPPL (ENSCPRG00005005724) #19	OSTC (ENSCPRG00005005807) #20	RPL34 (ENSCPRG00005005811) #21	LEF1 (ENSCPRG00005005834) #22	HADH (ENSCPRG00005005866) #23	CYP2U1 (ENSCPRG00005005868) #24	SGMS2 (ENSCPRG00005005872) #25	PAPSS1 (ENSCPRG00005005895) #26	ENSCPRG00005005914	GIMD1 (ENSCPRG00005005926) #28	AIMP1 (ENSCPRG00005005940) #29	ENSCPRG00005005945	TBCK (ENSCPRG00005005950) #30	NPNT (ENSCPRG00005006009) #31	GSTCD (ENSCPRG00005006089) #32	INTS12 (ENSCPRG00005006095) #33	ENSCPRG00005006102 #34	ENSCPRG00005006121 #34	PPA2 (ENSCPRG00005006128) #35
Anura	ANCESTRAL SPECIES	101										ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00940000159823 #18	ENSGT00940000157910 #19	ENSGT00390000001376 #20	ENSGT00390000008294 #21	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714.a #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Frog	MODERN SPECIES		elovl6 (ENSXETG00000013362) #7	enpep (ENSXETG00000013333)	ENSXETG00000044609	pitx2 (ENSXETG00000013330)	fam241a (ENSXETG00000025642)	pigy (ENSXETG00000044837)	pyurf (ENSXETG00000045121)	mcub (ENSXETG00000021086) #15	sec24b (ENSXETG00000021091) #16	rpl34 (ENSXETG00000021095) #21	col25a1.2 (ENSXETG00000021097) #18	etnppl (ENSXETG00000021098) #19	ostc (ENSXETG00000021099) #20	ENSXETG00000044768	ENSXETG00000046507	lef1 (ENSXETG00000021102) #22	hadh (ENSXETG00000021105) #23	cyp2u1 (ENSXETG00000021106) #24	anxa5 (ENSXETG00000021114)	SMIM43 (ENSXETG00000036860)	exosc9 (ENSXETG00000021118)	ccna2 (ENSXETG00000001016)	bbs7 (ENSXETG00000031279)	trpc3 (ENSXETG00000001003)	cldn8.4 (ENSXETG00000000997)	ENSXETG00000045945	ENSXETG00000036484	ENSXETG00000037088	ENSXETG00000001596	ENSXETG00000037798	adad1 (ENSXETG00000001593)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000004082	ENPEP (ENSLLEG00000004086)	ENSLLEG00000004108	ENSLLEG00000004119	FAM241A (ENSLLEG00000004121)	MCUB (ENSLLEG00000004126) #15	SEC24B (ENSLLEG00000004146) #16	ENSLLEG00000004180	ENSLLEG00000004181	ENSLLEG00000004186	COL25A1 (ENSLLEG00000004258) #18	ETNPPL (ENSLLEG00000004323) #19	OSTC (ENSLLEG00000004348) #20	RPL34 (ENSLLEG00000004358) #21	ENSLLEG00000004366	LEF1 (ENSLLEG00000004381) #22	ENSLLEG00000004422	ENSLLEG00000004435	CYP2U1 (ENSLLEG00000004438) #24	SGMS2 (ENSLLEG00000004446) #25	PAPSS1 (ENSLLEG00000004464) #26	ENSLLEG00000000145	ENSLLEG00000000153	GIMD1 (ENSLLEG00000000161) #28	AIMP1 (ENSLLEG00000000171) #29	TBCK (ENSLLEG00000000221) #30	ENSLLEG00000000361	NPNT (ENSLLEG00000000387) #31	ENSLLEG00000000467	FMN2 (ENSLLEG00000000473)	ENSLLEG00000000481
Coelacanth	MODERN SPECIES	2501																LEF1 (ENSLACG00000004977) #22	HADH (ENSLACG00000003125) #23	ENSLACG00000002364 #24
Actinopterygii	ANCESTRAL SPECIES	85	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.a	ENSGT00940000157887	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00950000182924.B.a.a #16	ENSGT00390000008250	ENSGT00950000182920.b.a.b.a.a	ENSGT00940000157910 #19	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Neopterygii	ANCESTRAL SPECIES	116	ENSGT00390000004643	ENSGT00940000165650	ENSGT00940000154737.d	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000167699	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.a	ENSGT00940000157887	ENSGT00930000151042 #12	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370 #25	ENSGT00390000009613.b #26	ENSGT00940000164073	ENSGT00530000069080 #28	ENSGT00940000154950 #29	ENSGT00940000158244 #30	ENSGT00930000150973.B #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Osteoglossocephalai	ANCESTRAL SPECIES	14	ENSGT00960000190222	ENSGT00390000004643	ENSGT01060000249224	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000167699	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059 #15	ENSGT00940000159660 #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37	ENSGT00940000159801.A
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	148	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000160368	ENSGT00390000011365.b.l	ENSGT00940000155951.a	ENSGT00940000155951.b	ENSGT00940000155598.d	ENSGT00950000182907.a.b.b.a.b	ENSGT00940000154737.d.e	ENSGT01060000248998	ENSGT01030000235336	ENSGT00950000182917.a.a.a.a	ENSGT00940000157887.p	ENSGT00930000151042 #12	ENSGT00940000155140 #14	ENSGT00940000159660.g #22	ENSGT00940000157714 #24	ENSGT00940000157370.a #25	ENSGT00940000164073.b.a	ENSGT00530000069080 #28	ENSGT00940000154950.y.b #29	ENSGT00930000150973.B.e.a #31	ENSGT00940000160003.h #36	ENSGT00940000153173.a	ENSGT00530000064170.d	ENSGT00940000163785.a.a.a	ENSGT00940000160120.e.a	ENSGT00950000183109.d	ENSGT00390000015948.a.c	ENSGT00390000017452	ENSGT00940000160184.c.b.f
Asian bonytongue	MODERN SPECIES	18	CDKL2 (ENSSFOG00015013655)	G3BP2 (ENSSFOG00015013690)	ENSSFOG00015013782	tec (ENSSFOG00015013833)	CORO2A (ENSSFOG00015013929)	anp32b (ENSSFOG00015032852)	ENSSFOG00015013986	bnc2 (ENSSFOG00015014026)	ENSSFOG00015014057	PSIP1 (ENSSFOG00015014102)	TTC39B (ENSSFOG00015014125)	dnajb14 (ENSSFOG00015014183)	ENSSFOG00015014238 #12	CASP6 (ENSSFOG00015029815) #14	ENSSFOG00015014418 #14	LEF1 (ENSSFOG00015014526) #22	cyp2u1 (ENSSFOG00015014549) #24	sgms2b (ENSSFOG00015031933) #25	ENSSFOG00015014602	GIMD1 (ENSSFOG00015014614) #28	AIMP1 (ENSSFOG00015014632) #29	NPNT (ENSSFOG00015016658) #31	ints12 (ENSSFOG00015016612) #33	ENSSFOG00015016592 #36	CXXC4 (ENSSFOG00015030741) #37	ENSSFOG00015025165	RIGI (ENSSFOG00015017386)	ENSSFOG00015017318	MXD4 (ENSSFOG00015025169)	ENSSFOG00015017269	cyp17a2 (ENSSFOG00015017249)
P. kingsleyae	MODERN SPECIES	234	ENSPKIG00000013513	CORO2A (ENSPKIG00000013483)	ENSPKIG00000013456	ENSPKIG00000013442	ENSPKIG00000013423	ENSPKIG00000013396	G3BP2 (ENSPKIG00000013310)	abcg2a (ENSPKIG00000013249)	PPM1K (ENSPKIG00000013197)	ENSPKIG00000013165	ENSPKIG00000013148	ENSPKIG00000013137	TBC1D9 (ENSPKIG00000012912)	RNF150 (ENSPKIG00000012850)	znf330 (ENSPKIG00000012819)	LEF1 (ENSPKIG00000012779) #22	cyp2u1 (ENSPKIG00000012757) #24	sgms2b (ENSPKIG00000012734) #25	ENSPKIG00000012720	GIMD1 (ENSPKIG00000012707) #28	aimp1b (ENSPKIG00000012696) #29	NPNT (ENSPKIG00000012674) #31	ENSPKIG00000012637 #36
Osteoglossiformes	ANCESTRAL SPECIES	108	ENSGT00940000155598.c	ENSGT00950000182907.a.b.b.a.a	ENSGT00390000004643	ENSGT01060000249224	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000167699	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887.o	ENSGT00390000008798.c #13	ENSGT00940000158059 #15	ENSGT00940000159660.h #22	ENSGT00940000159984 #23	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.b.b	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218.k #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003.g #36	ENSGT00940000154108.b.a.a #37	ENSGT00940000159801.A.a	ENSGT00950000182991.B
Asian bonytongue	MODERN SPECIES	7	uso1 (ENSSFOG00015017903)	coro2aa (ENSSFOG00015018035)	anp32b (ENSSFOG00015032871)	trmo (ENSSFOG00015018124)	ENSSFOG00015018153	ENSSFOG00015032409	sh3gl2a (ENSSFOG00015018201)	CNTLN (ENSSFOG00015031410)	bnc2 (ENSSFOG00015025047)	PSIP1 (ENSSFOG00015018274)	snapc3 (ENSSFOG00015018372)	TTC39B (ENSSFOG00015018388)	dnajb14 (ENSSFOG00015018429)	pla2g12a (ENSSFOG00015027653) #13	ENSSFOG00015024817 #15	lef1 (ENSSFOG00015018486) #22	hadh (ENSSFOG00015018506) #23	sgms2a (ENSSFOG00015018552) #25	papss1 (ENSSFOG00015025025) #26	ENSSFOG00015018618	aimp1a (ENSSFOG00015018626) #29	tbck (ENSSFOG00015018647) #30	npnta (ENSSFOG00015018747) #31	gstcd (ENSSFOG00015018781) #32	ints12 (ENSSFOG00015018796) #33	ARHGEF38 (ENSSFOG00015018810) #34	ppa2 (ENSSFOG00015018820) #35	TET2 (ENSSFOG00015018838) #36	CXXC4 (ENSSFOG00015018857) #37	ENSSFOG00015032015	mtap (ENSSFOG00015033003)
P. kingsleyae	MODERN SPECIES	6	g3bp2a (ENSPKIG00000013985)	uso1 (ENSPKIG00000013731)	coro2aa (ENSPKIG00000013597)	anp32b (ENSPKIG00000013545)	trmo (ENSPKIG00000013505)	ENSPKIG00000013474	ENSPKIG00000013381	ENSPKIG00000013272	CNTLN (ENSPKIG00000013170)	bnc2 (ENSPKIG00000013129)	PSIP1 (ENSPKIG00000013066)	snapc3 (ENSPKIG00000013017)	pla2g12a (ENSPKIG00000012993) #13	dnajb14 (ENSPKIG00000012948)	ENSPKIG00000012909 #15	lef1 (ENSPKIG00000012891) #22	hadh (ENSPKIG00000012813) #23	sgms2a (ENSPKIG00000012756) #25	papss1 (ENSPKIG00000012723) #26	ENSPKIG00000012697	aimp1a (ENSPKIG00000012660) #29	ENSPKIG00000012482	tbck (ENSPKIG00000012287) #30	npnta (ENSPKIG00000012155) #31	gstcd (ENSPKIG00000012085) #32	ints12 (ENSPKIG00000012046) #33	ARHGEF38 (ENSPKIG00000012009) #34	ppa2 (ENSPKIG00000011957) #35	TET2 (ENSPKIG00000011904) #36	CXXC4 (ENSPKIG00000011861) #37	ENSPKIG00000011762
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Turquoise killifish	MODERN SPECIES	1611	exosc1 (ENSNFUG00015012920)	C1H16ORF88 (ENSNFUG00015012910)	gprc5bb (ENSNFUG00015012899)	ENSNFUG00015012888	ENSNFUG00015012874	RAB33B (ENSNFUG00015012863)	naa15b (ENSNFUG00015010196)	ENSNFUG00015010006	ENSNFUG00015009983	SCOC (ENSNFUG00015009965)	CLGN (ENSNFUG00015008735)	exosc9 (ENSNFUG00015008492)	casp6a (ENSNFUG00015008416) #14	CCDC109B (ENSNFUG00015008408) #15	ENSNFUG00015008398 #22	ENSNFUG00015008394 #22	HADH (ENSNFUG00015008386) #23	SOD3 (ENSNFUG00015008382)	DHX15 (ENSNFUG00015007905)	ENSNFUG00015007847	slc22a7b.1 (ENSNFUG00015007834)	ENSNFUG00015007818	SYNPO2 (ENSNFUG00015007809)	myoz2b (ENSNFUG00015007801)	USP53B (ENSNFUG00015007793)	fabp2 (ENSNFUG00015007783)	GUCY1A3 (ENSNFUG00015007767)	UFSP2 (ENSNFUG00015007760)	gucy1b1 (ENSNFUG00015007645)	helt (ENSNFUG00015007622)	acsl1a (ENSNFUG00015007556)
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Eupecaria_C	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Gilthead seabream	MODERN SPECIES	1	ENSSAUG00010005269	ENSSAUG00010005271	ENSSAUG00010005274	ENSSAUG00010005276	ENSSAUG00010005284	ENSSAUG00010005287	ENSSAUG00010005290	ENSSAUG00010005298	ENSSAUG00010005573	ENSSAUG00010005578	ENSSAUG00010005584	ENSSAUG00010005586	ENSSAUG00010005590	ENSSAUG00010005594	ENSSAUG00010005602	ENSSAUG00010005619 #22	sgms2b (ENSSAUG00010005624) #25	aimp1b (ENSSAUG00010005628) #29	ENSSAUG00010005633	ENSSAUG00010005638	ENSSAUG00010005641 #15	ENSSAUG00010005644	ENSSAUG00010005656 #12	ENSSAUG00010005686	ENSSAUG00010005996	ENSSAUG00010005998	wdr55 (ENSSAUG00010005999)	ENSSAUG00010006000	ENSSAUG00010006001	ENSSAUG00010006002	ENSSAUG00010006003
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Huchen	MODERN SPECIES	2389															cyp2u1 (ENSHHUG00000052805) #24	ENSHHUG00000052806 #22	sgms2a (ENSHHUG00000052807) #25	papss1 (ENSHHUG00000052808) #26	dkk2 (ENSHHUG00000052847)	aimp1a (ENSHHUG00000052848) #29	tbck (ENSHHUG00000052849) #30
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000159660.i.a #22
Electric eel	MODERN SPECIES	1543																ENSEEEG00000009045 #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000159660.i.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000159660.i.b #22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000159660.i.b #22
Salmoninae	ANCESTRAL SPECIES	112	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000154737.d.o.a.a	ENSGT00440000034932.b	ENSGT00390000005844.a.b.p	ENSGT00940000154706.rb.b.a.a	ENSGT00390000005708.l	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887.q	ENSGT00390000008798.c.i #13	ENSGT00940000157887.r	ENSGT00390000008798.c.j.b.a #13	ENSGT00940000155140.hb #14	ENSGT00940000158059.g.a.a #15	ENSGT00940000159660.j #22	ENSGT00940000159660.i.b #22	ENSGT00940000159984.c #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244.d #30	ENSGT00940000161510	ENSGT00940000156796.c.a.a.a	ENSGT00940000156796.c.a.a.b.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Huchen	MODERN SPECIES	950																LEF1 (ENSHHUG00000015624) #22	hadh (ENSHHUG00000015570) #23	cyp2u1 (ENSHHUG00000015557) #24	sgms2a (ENSHHUG00000015551) #25	papss1 (ENSHHUG00000015417) #26	dkk2 (ENSHHUG00000015409)	aimp1a (ENSHHUG00000015382) #29	tbck (ENSHHUG00000015311) #30	ENSHHUG00000015303	ALOX15B (ENSHHUG00000015256)	ENSHHUG00000015253	ENSHHUG00000015029	npnta (ENSHHUG00000015012) #31	gstcd (ENSHHUG00000014980) #32	ints12 (ENSHHUG00000014977) #33	ARHGEF38 (ENSHHUG00000014974) #34
Clupeocephala	ANCESTRAL SPECIES	26	ENSGT00940000165650	ENSGT00940000157398.j	ENSGT00940000155598.b	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00940000161510	ENSGT00940000156796.c.b	ENSGT00940000166257	ENSGT00940000156796.c.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Otomorpha	ANCESTRAL SPECIES	57	ENSGT01060000249224	ENSGT00940000165650	ENSGT00940000157398.j	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.h	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32
Clupeiformes	ANCESTRAL SPECIES	67	ENSGT00390000004643	ENSGT01060000249224	ENSGT00940000165650	ENSGT00940000160529	ENSGT00940000155598.b.n	ENSGT00940000154737.d	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00390000017018.b	ENSGT00390000011365.b.w.a	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37	ENSGT00940000159801.A	ENSGT00950000182991.B	ENSGT00530000064170.c	ENSGT00390000007535	ENSGT00390000006684	ENSGT00950000182810.B.b.a.a	ENSGT00940000160120	ENSGT00950000183109.d.e.a
Denticle herring	MODERN SPECIES	14	ncapg (ENSDCDG00000025503)	cyp2u1 (ENSDCDG00000025568) #24	hadh (ENSDCDG00000009873) #23	coro2aa (ENSDCDG00000009914)	anp32b (ENSDCDG00000010827)	trmo (ENSDCDG00000010846)	ENSDCDG00000010875	sh3gl2a (ENSDCDG00000010885)	bnc2 (ENSDCDG00000011112)	PSIP1 (ENSDCDG00000011122)	snapc3 (ENSDCDG00000011135)	TTC39B (ENSDCDG00000011186)	pla2g12a (ENSDCDG00000011320) #13	casp6a (ENSDCDG00000011336) #14	MCUB (ENSDCDG00000011350) #15	lef1 (ENSDCDG00000011390) #22	uso1 (ENSDCDG00000011611)	g3bp2a (ENSDCDG00000011741)	ints12 (ENSDCDG00000011750) #33	ARHGEF38 (ENSDCDG00000011752) #34	ppa2 (ENSDCDG00000011763) #35	TET2 (ENSDCDG00000011781) #36	CXXC4 (ENSDCDG00000011791) #37	ENSDCDG00000011797	mtap (ENSDCDG00000011804)	toporsa (ENSDCDG00000011809)	ndufb6 (ENSDCDG00000011811)	ENSDCDG00000011817	MXD4 (ENSDCDG00000011828)	ENSDCDG00000011836	pdcd4a (ENSDCDG00000012023)
Atlantic herring	MODERN SPECIES	14	coro2aa (ENSCHAG00000003554)	anp32b (ENSCHAG00000003481)	trmo (ENSCHAG00000003426)	ENSCHAG00000002892	ENSCHAG00000002796	ENSCHAG00000002619	CNTLN (ENSCHAG00000002484)	bnc2 (ENSCHAG00000027849)	psip1a (ENSCHAG00000027848)	snapc3 (ENSCHAG00000027847)	TTC39B (ENSCHAG00000027842)	dnajb14 (ENSCHAG00000027840)	pla2g12a (ENSCHAG00000027839) #13	casp6a (ENSCHAG00000027837) #14	MCUB (ENSCHAG00000027836) #15	lef1 (ENSCHAG00000027834) #22	uso1 (ENSCHAG00000027828)	g3bp2a (ENSCHAG00000027819)	ints12 (ENSCHAG00000027817) #33	ARHGEF38 (ENSCHAG00000027816) #34	ppa2 (ENSCHAG00000027813) #35	TET2 (ENSCHAG00000027812) #36	CXXC4 (ENSCHAG00000027811) #37	ENSCHAG00000027810	ENSCHAG00000027809	ENSCHAG00000027807	mtap (ENSCHAG00000027806)	toporsa (ENSCHAG00000027804)	ndufb6 (ENSCHAG00000027802)	TMEM215 (ENSCHAG00000027800)	ENSCHAG00000027797
Otophysi	ANCESTRAL SPECIES	79														ENSGT00940000155140.s #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000004446 #32	ENSGT00930000150973.B.e.b #31	ENSGT00940000158244 #30	ENSGT00940000154950.y.a #29	ENSGT00940000164073.a	ENSGT00390000009613.b #26	ENSGT00940000159025	ENSGT00940000166376	ENSGT00940000156633.d.a	ENSGT00940000163989.a.b	ENSGT00940000165755.b	ENSGT00940000158189
Cyprinoidei	ANCESTRAL SPECIES	30									ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00980000198902	ENSGT00940000168136	ENSGT00940000156184.a	ENSGT00940000159205	ENSGT00940000163031.b.a.a	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000004446 #32	ENSGT00930000150973.B.e.b #31	ENSGT00940000158244 #30	ENSGT00940000154950.y.a #29	ENSGT00940000164073.a	ENSGT00390000009613.b #26	ENSGT00940000159025	ENSGT00940000166376	ENSGT00940000156633.d.a	ENSGT00940000175002	ENSGT00940000165755.b.f	ENSGT00940000158189
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	710													ENSGT00940000156184.a.d	ENSGT00940000159205.eb	ENSGT00940000163031.b.a.a.a	ENSGT00940000159660.j.a #22	ENSGT00940000159984.a #23	ENSGT00940000157714.k #24	ENSGT00940000157370.b.g #25	ENSGT00390000004446.j #32	ENSGT00930000150973.B.e.b.b #31	ENSGT00940000158244.e #30	ENSGT00940000154950.y.a.b #29	ENSGT00990000205111
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	18	ENSCARG00000015006	ENSCARG00000014998	ENSCARG00000014992	patl1 (ENSCARG00000014980)	smarca5 (ENSCARG00000013247)	ENSCARG00000012157	ENSCARG00000012067	caly (ENSCARG00000012057)	ENSCARG00000012051	si:dkeyp-80c12.8 (ENSCARG00000012038)	gsk3bb (ENSCARG00000011970)	taf5 (ENSCARG00000011750)	atp5md (ENSCARG00000011724)	pdcd11 (ENSCARG00000011697)	zgc:175214 (ENSCARG00000011679)	lef1 (ENSCARG00000011646) #22	hadh (ENSCARG00000011632) #23	cyp2u1 (ENSCARG00000011624) #24	sgms2a (ENSCARG00000011618) #25	npnta (ENSCARG00000011500) #31	tbck (ENSCARG00000011370) #30	aimp1a (ENSCARG00000011334) #29	ENSCARG00000011320	ENSCARG00000008374	ENSCARG00000008217	ENSCARG00000008223	caly (ENSCARG00000008210)	ENSCARG00000008199	si:dkeyp-80c12.8 (ENSCARG00000008191)	gsk3bb (ENSCARG00000008132)	taf5 (ENSCARG00000007611)
Goldfish	MODERN SPECIES	18	srd5a2a (ENSCARG00000026622)	psen2 (ENSCARG00000026635)	dpy30 (ENSCARG00000026669)	spast (ENSCARG00000026789)	ugp2a (ENSCARG00000029029)	mdh1aa (ENSCARG00000029087)	otx2a (ENSCARG00000029112)	ENSCARG00000029115	zgc:154142 (ENSCARG00000029126)	FAM13A (ENSCARG00000029249)	herc3 (ENSCARG00000030707)	ENSCARG00000030985	slkb (ENSCARG00000031145)	tsga10 (ENSCARG00000036965)	ENSCARG00000036990	lef1 (ENSCARG00000003902) #22	hadh (ENSCARG00000003991) #23	cyp2u1 (ENSCARG00000004040) #24	sgms2a (ENSCARG00000004057) #25	ENSCARG00000004069 #32	npnta (ENSCARG00000004092) #31	tbck (ENSCARG00000004186) #30	aimp1a (ENSCARG00000004429) #29	ENSCARG00000004442	dkk2 (ENSCARG00000004459)	papss1 (ENSCARG00000004595) #26	papss1 (ENSCARG00000005781) #26	pkd2 (ENSCARG00000006655)	abcg2d (ENSCARG00000006837)	ppm1kb (ENSCARG00000007419)	ENSCARG00000007429
Cyprininae_a	ANCESTRAL SPECIES	64	ENSGT00950000182886.b.a.b.a.a	ENSGT00940000157923.g	ENSGT00390000008808.r.a.a.b	ENSGT00940000156258.f.b.d	ENSGT00940000153464.B.z.a.c	ENSGT00530000063410.a.r.d.a	ENSGT00940000167432.h	ENSGT00570000079168.b.b.b.bb.b	ENSGT01030000234528.A.a.a	ENSGT00950000183033.a.b.a.oc	ENSGT00940000158189.t.b.a	ENSGT00940000165755.b.e.b	ENSGT00940000156184.a.d	ENSGT00940000159205.eb	ENSGT00940000163031.b.a.a.a	ENSGT00940000159660.j.a #22	ENSGT00940000159984.a #23	ENSGT00940000157714.k #24	ENSGT00940000157370.b.g #25	ENSGT00390000004446.i.a #32	ENSGT00930000150973.B.e.b.b #31	ENSGT00940000158244.e #30	ENSGT00940000154950.y.a.b #29	ENSGT00940000164073.a.h	ENSGT00390000009613.b.h #26	ENSGT00940000159025.b	ENSGT00940000166376.l	ENSGT00940000156633.d.a.b	ENSGT00940000165755.b.f.a.b.a
Golden-line barbel	MODERN SPECIES	182	ENSSGRG00000002274	psen2 (ENSSGRG00000002276)	dpy30 (ENSSGRG00000002277)	spast (ENSSGRG00000002284)	ugp2a (ENSSGRG00000002285)	mdh1aa (ENSSGRG00000002310)	otx2a (ENSSGRG00000004968)	ENSSGRG00000004970	zgc:154142 (ENSSGRG00000004975)	FAM13A (ENSSGRG00000005009)	ENSSGRG00000006526	herc3 (ENSSGRG00000006528)	slkb (ENSSGRG00000006742)	tsga10 (ENSSGRG00000007018)	ENSSGRG00000007027	lef1 (ENSSGRG00000007033) #22	hadh (ENSSGRG00000007044) #23	cyp2u1 (ENSSGRG00000007103) #24	sgms2a (ENSSGRG00000007104) #25	gstcd (ENSSGRG00000007106) #32	npnta (ENSSGRG00000007109) #31	tbck (ENSSGRG00000007114) #30	aimp1a (ENSSGRG00000008038) #29	ENSSGRG00000008041	dkk2 (ENSSGRG00000008043)	papss1 (ENSSGRG00000008047) #26	pkd2 (ENSSGRG00000008250)	abcg2d (ENSSGRG00000008607)	ppm1kb (ENSSGRG00000008608)	ENSSGRG00000008609	ENSSGRG00000008612
Common carp reference	MODERN SPECIES	27	ugp2a (ENSCCRG00000017797)	ENSCCRG00000077367	ENSCCRG00000070834	mdh1aa (ENSCCRG00000017220)	otx2a (ENSCCRG00000063692)	ENSCCRG00000009748	ENSCCRG00000068508	zgc:154142 (ENSCCRG00000015426)	FAM13A (ENSCCRG00000072001)	herc3 (ENSCCRG00000022882)	ENSCCRG00000066863	col17a1a (ENSCCRG00000073322)	slkb (ENSCCRG00000037660)	tsga10 (ENSCCRG00000000253)	ENSCCRG00000000290	lef1 (ENSCCRG00000073428) #22	hadh (ENSCCRG00000082295) #23	cyp2u1 (ENSCCRG00000008936) #24	sgms2a (ENSCCRG00000008950) #25	gstcd (ENSCCRG00000038725) #32	npnta (ENSCCRG00000082342) #31	tbck (ENSCCRG00000033744) #30	aimp1a (ENSCCRG00000043575) #29	dkk2 (ENSCCRG00000043571)	papss1 (ENSCCRG00000025335) #26	pkd2 (ENSCCRG00000047369)	abcg2d (ENSCCRG00000021720)	ENSCCRG00000037777	ENSCCRG00000070355	ENSCCRG00000060180	CALHM1 (ENSCCRG00000021704)
Cyprininae	ANCESTRAL SPECIES	38	ENSGT00940000157923.h	ENSGT00390000008808.r.a.a.a	ENSGT00940000156258.f.b.c	ENSGT00940000153464.B.z.a.d	ENSGT00530000063410.a.r.d.b	ENSGT00940000167432.g	ENSGT00570000079168.b.b.b.bb.a	ENSGT00950000183033.a.b.a.nc	ENSGT00940000158189.t.a	ENSGT00940000165755.b.e.a	ENSGT00980000198902	ENSGT00940000168136	ENSGT00940000156184.a.c	ENSGT00940000159205.db	ENSGT00940000163031.b.a.a.b	ENSGT00940000159660.j.b #22	ENSGT00940000159984.b #23	ENSGT00940000157714.l #24	ENSGT00940000157370.b.h #25	ENSGT00390000004446.i #32	ENSGT00930000150973.B.e.b.a #31	ENSGT00940000158244.f #30	ENSGT00940000154950.y.a.a #29	ENSGT00940000164073.a.g	ENSGT00390000009613.b.g #26	ENSGT00940000159025.a	ENSGT00940000166376.k	ENSGT00940000156633.d.a.a	ENSGT00940000175002	ENSGT00940000165755.b.f.a.b.b	ENSGT01030000234567.A.a.a.a.a.b.f
Goldfish	MODERN SPECIES		ENSCARG00000002608	psen2 (ENSCARG00000002597)	dpy30 (ENSCARG00000002592)	spast (ENSCARG00000001881)	ugp2a (ENSCARG00000001834)	mdh1aa (ENSCARG00000001809)	otx2a (ENSCARG00000001799)	ENSCARG00000001797	FAM13A (ENSCARG00000001731)	herc3 (ENSCARG00000001667)	ENSCARG00000001579	ENSCARG00000001554	slkb (ENSCARG00000000832)	tsga10 (ENSCARG00000000604)	ENSCARG00000000592	lef1 (ENSCARG00000000579) #22	sgms2a (ENSCARG00000000571) #25	gstcd (ENSCARG00000000525) #32	npnta (ENSCARG00000000477) #31	tbck (ENSCARG00000000449) #30	aimp1a (ENSCARG00000000438) #29	ENSCARG00000000433	dkk2 (ENSCARG00000000424)	papss1 (ENSCARG00000000350) #26	pkd2 (ENSCARG00000000156)	ppm1kb (ENSCARG00000009159)	ENSCARG00000009154	ENSCARG00000009141	zp3c (ENSCARG00000009127)	ITPRIP (ENSCARG00000009118)	CALHM1 (ENSCARG00000009112)
Cyprininae_a	ANCESTRAL SPECIES	66	ENSGT00940000157923.h	ENSGT00390000008808.r.a.a.a	ENSGT00940000156258.f.b.c	ENSGT00940000153464.B.z.a.d	ENSGT00530000063410.a.r.d.b	ENSGT00940000167432.g	ENSGT00570000079168.b.b.b.bb.a	ENSGT00950000183033.a.b.a.nc	ENSGT00940000158189.t.a	ENSGT00940000165755.b.e.a	ENSGT00980000198902	ENSGT00940000168136	ENSGT00940000156184.a.c	ENSGT00940000159205.db	ENSGT00940000163031.b.a.a.b	ENSGT00940000159660.j.b #22	ENSGT00940000159984.b #23	ENSGT00940000157714.l #24	ENSGT00940000157370.b.h #25	ENSGT00390000004446.i.b #32	ENSGT00930000150973.B.e.b.a #31	ENSGT00940000158244.f #30	ENSGT00940000154950.y.a.a #29	ENSGT00940000164073.a.g	ENSGT00390000009613.b.g #26	ENSGT00940000159025.a	ENSGT00940000166376.k	ENSGT00940000156633.d.a.a	ENSGT00940000165755.b.f.a.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.a
Common carp reference	MODERN SPECIES	22	psen2 (ENSCCRG00000053893)	dpy30 (ENSCCRG00000024555)	spast (ENSCCRG00000017684)	ugp2a (ENSCCRG00000017630)	mdh1aa (ENSCCRG00000054336)	otx2a (ENSCCRG00000079168)	ENSCCRG00000045974	FAM13A (ENSCCRG00000053503)	herc3 (ENSCCRG00000015479)	ENSCCRG00000037889	ENSCCRG00000037746	col17a1a (ENSCCRG00000069314)	slkb (ENSCCRG00000017145)	tsga10 (ENSCCRG00000051824)	ENSCCRG00000074534	lef1 (ENSCCRG00000054171) #22	hadh (ENSCCRG00000008946) #23	cyp2u1 (ENSCCRG00000067421) #24	sgms2a (ENSCCRG00000008752) #25	gstcd (ENSCCRG00000058210) #32	npnta (ENSCCRG00000037685) #31	tbck (ENSCCRG00000067399) #30	aimp1a (ENSCCRG00000074903) #29	dkk2 (ENSCCRG00000056997)	papss1 (ENSCCRG00000043458) #26	abcg2d (ENSCCRG00000047785)	pkd2 (ENSCCRG00000043486)	ENSCCRG00000021702	ENSCCRG00000021709	ENSCCRG00000061509	zp3c (ENSCCRG00000021706)
Golden-line barbel	MODERN SPECIES	50	ENSSGRG00000014993	srd5a2a (ENSSGRG00000014942)	psen2 (ENSSGRG00000014911)	dpy30 (ENSSGRG00000014907)	spast (ENSSGRG00000014891)	ugp2a (ENSSGRG00000014565)	otx2a (ENSSGRG00000014559)	ENSSGRG00000014557	ENSSGRG00000014554	FAM13A (ENSSGRG00000014549)	herc3 (ENSSGRG00000014158)	ENSSGRG00000014136	ENSSGRG00000014135	slkb (ENSSGRG00000013889)	tsga10 (ENSSGRG00000013886)	lef1 (ENSSGRG00000013870) #22	hadh (ENSSGRG00000013869) #23	cyp2u1 (ENSSGRG00000013868) #24	sgms2a (ENSSGRG00000013867) #25	gstcd (ENSSGRG00000013856) #32	npnta (ENSSGRG00000013845) #31	tbck (ENSSGRG00000013788) #30	aimp1a (ENSSGRG00000013786) #29	ENSSGRG00000013785	dkk2 (ENSSGRG00000013784)	papss1 (ENSSGRG00000012522) #26	pkd2 (ENSSGRG00000012197)	abcg2d (ENSSGRG00000011534)	ppm1kb (ENSSGRG00000011519)	ENSSGRG00000011518	ITPRIP (ENSSGRG00000011516)
Zebrafish	MODERN SPECIES		gsk3bb (ENSDARG00000052468)	taf5 (ENSDARG00000018325)	atp5md (ENSDARG00000096003)	pdcd11 (ENSDARG00000052480)	zgc:175214 (ENSDARG00000022891)	CALHM1 (ENSDARG00000005314)	ITPRIP (ENSDARG00000036479)	zp3c (ENSDARG00000092919)	herc56.4 (ENSDARG00000074052)	herc56.3 (ENSDARG00000074136)	herc56.2 (ENSDARG00000075389)	col17a1a (ENSDARG00000069415)	slkb (ENSDARG00000012574)	tsga10 (ENSDARG00000052512)	ENSDARG00000079501	lef1 (ENSDARG00000031894) #22	hadh (ENSDARG00000030765) #23	cyp2u1 (ENSDARG00000026548) #24	sgms2a (ENSDARG00000052520) #25	gstcd (ENSDARG00000036494) #32	npnta (ENSDARG00000018721) #31	ENSDARG00000114696	tbck (ENSDARG00000013667) #30	aimp1a (ENSDARG00000060036) #29	dkk2 (ENSDARG00000076420)	papss1 (ENSDARG00000057099) #26	pkd2 (ENSDARG00000014098)	abcg2d (ENSDARG00000016818)	ppm1kb (ENSDARG00000010655)	ENSDARG00000075785	herc3 (ENSDARG00000075887)
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00940000156391.d	ENSGT00950000183001.b.b.a	ENSGT00940000159570.a	ENSGT00940000157090.h	ENSGT00950000183174.B.a.e	ENSGT00950000182915.a.a.b	ENSGT00390000008828.fb.b	ENSGT00950000183201.b.a.b	ENSGT00940000154259.b.b	ENSGT00940000154810.jb	ENSGT00940000162502.a	ENSGT00940000157807.g.b	ENSGT01100000263483.E.b.a.c.b	ENSGT00940000155140.s #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000004446 #32	ENSGT00930000150973.B.e.b #31	ENSGT00940000158244 #30	ENSGT00940000154950.y.a #29	ENSGT00940000164073.a	ENSGT00390000009613.b #26	ENSGT00940000159025	ENSGT00940000166376	ENSGT00940000156633.d.a	ENSGT00940000163989.a.b	ENSGT00940000165755.b	ENSGT00940000158189
Channel catfish	MODERN SPECIES	22	scoca (ENSIPUG00000009524)	maml3 (ENSIPUG00000009517)	zgc:56493 (ENSIPUG00000009504)	PTGR1 (ENSIPUG00000009465)	faah2a (ENSIPUG00000009449)	ENSIPUG00000009411	ENSIPUG00000009403	ENSIPUG00000009345	ENSIPUG00000009331	ENSIPUG00000009321	ENSIPUG00000009313	ENSIPUG00000009291	CASP6 (ENSIPUG00000009042) #14	ENSIPUG00000009010 #14	mcub (ENSIPUG00000009001) #15	LEF1 (ENSIPUG00000008946) #22	hadh (ENSIPUG00000008863) #23	cyp2u1 (ENSIPUG00000008854) #24	sgms2 (ENSIPUG00000008837) #25	gstcd (ENSIPUG00000008765) #32	npnt (ENSIPUG00000008639) #31	TBCK (ENSIPUG00000008423) #30	aimp1a (ENSIPUG00000008314) #29	dkk2 (ENSIPUG00000008298)	papss1 (ENSIPUG00000008270) #26	pkd2 (ENSIPUG00000008177)	abcg2d (ENSIPUG00000008137)	ENSIPUG00000008124	abcg2d (ENSIPUG00000007849)	ppm1kb (ENSIPUG00000007801)	ENSIPUG00000007786
Characiphysae_b	ANCESTRAL SPECIES	76	ENSGT01100000263541.a.a.b.a.a.b	ENSGT00940000159570.a	ENSGT00940000157090.h	ENSGT00950000183174.B.a.e	ENSGT00950000182915.a.a.b	ENSGT00390000008828.fb.b	ENSGT00950000183201.b.a.b	ENSGT01030000234601.r.a.c	ENSGT00940000154259.b.b	ENSGT00940000154810.jb	ENSGT00940000162502.a	ENSGT00940000157807.g.b	ENSGT01100000263483.E.b.a.c.b	ENSGT00940000155140.s #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000004446 #32	ENSGT00930000150973.B.e.b #31	ENSGT00940000158244 #30	ENSGT00940000154950.y.a #29	ENSGT00940000164073.a	ENSGT00390000009613.b #26	ENSGT00940000159025	ENSGT00940000166376	ENSGT00940000156633.d.a	ENSGT00940000175002	ENSGT00940000165755.a	ENSGT00940000158189
Characoidei	ANCESTRAL SPECIES	83	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00390000017284.a.b.d	ENSGT00940000155980.B	ENSGT00940000169481	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01100000263483.E.b.a.c.b.c	ENSGT00940000155140.s.f #14	ENSGT00940000155140.s.e #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000004446 #32	ENSGT00930000150973.B.e.b #31	ENSGT00940000158244 #30	ENSGT00940000154950.y.a #29	ENSGT00940000164073.a	ENSGT00390000009613.b #26	ENSGT00940000159025	ENSGT00940000166376	ENSGT00940000156633.d.a	ENSGT00940000163989.a.b	ENSGT00940000165755.b	ENSGT00940000165755.a
Mexicana tetra	MODERN SPECIES	17	htt (ENSAMXG00000010292)	ENSAMXG00000037213	paip2b (ENSAMXG00000038609)	ENSAMXG00000010283	ENSAMXG00000030152	tmem176 (ENSAMXG00000010274)	vps37c (ENSAMXG00000038699)	ENSAMXG00000034110	ENSAMXG00000010268	ENSAMXG00000010267	ENSAMXG00000024933	CASP6 (ENSAMXG00000010264) #14	CASP6 (ENSAMXG00000010263) #14	ENSAMXG00000033159	ENSAMXG00000010258 #15	lef1 (ENSAMXG00000038706) #22	hadh (ENSAMXG00000010252) #23	cyp2u1 (ENSAMXG00000010249) #24	sgms2a (ENSAMXG00000010245) #25	gstcd (ENSAMXG00000010240) #32	npnta (ENSAMXG00000019000) #31	tbck (ENSAMXG00000019079) #30	aimp1a (ENSAMXG00000019203) #29	dkk2 (ENSAMXG00000030417)	papss1 (ENSAMXG00000019274) #26	pkd2 (ENSAMXG00000019444)	abcg2d (ENSAMXG00000019573)	ppm1kb (ENSAMXG00000041919)	ENSAMXG00000019740	ENSAMXG00000019935	ENSAMXG00000036890
Red-bellied piranha	MODERN SPECIES	75	tmem184c (ENSPNAG00000018682)	ednraa (ENSPNAG00000018703)	pou4f2 (ENSPNAG00000018723)	ENSPNAG00000018757	lsm6 (ENSPNAG00000018779)	zgc:152968 (ENSPNAG00000018796)	mmaa (ENSPNAG00000018835)	smad1 (ENSPNAG00000018876)	ABCE1 (ENSPNAG00000018952)	ENSPNAG00000018976 #31	hhip (ENSPNAG00000019049)	ENSPNAG00000019064	frem3 (ENSPNAG00000019126)	CASP6 (ENSPNAG00000019149) #14	ENSPNAG00000019163 #15	lef1 (ENSPNAG00000019234) #22	hadh (ENSPNAG00000019256) #23	cyp2u1 (ENSPNAG00000019273) #24	sgms2a (ENSPNAG00000019292) #25	ENSPNAG00000019334	gstcd (ENSPNAG00000019351) #32	ENSPNAG00000019372	npnta (ENSPNAG00000019459) #31
Electric eel	MODERN SPECIES	635							ENSEEEG00000012935	ENSEEEG00000012936	FAM13A (ENSEEEG00000012943)	herc3 (ENSEEEG00000013059)	ENSEEEG00000013850	faah2a (ENSEEEG00000013914)	ENSEEEG00000013934	ENSEEEG00000013937	ENSEEEG00000013939 #15	lef1 (ENSEEEG00000013941) #22
Euteleosteomorpha	ANCESTRAL SPECIES	38	ENSGT00390000004643	ENSGT00400000022377	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00940000161510	ENSGT00940000156796.c.b	ENSGT00940000166257	ENSGT00940000156796.c.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Acanthomorphata	ANCESTRAL SPECIES	36	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00940000161510	ENSGT00940000156796.c.b	ENSGT00940000166257	ENSGT00940000156796.c.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Cod	MODERN SPECIES	16	ENSGMOG00000025174	sh3gl2a (ENSGMOG00000016523)	ENSGMOG00000034533	ENSGMOG00000032870	bnc2 (ENSGMOG00000027527)	PSIP1 (ENSGMOG00000017081)	SNAPC3 (ENSGMOG00000017104)	TTC39B (ENSGMOG00000017126)	ENSGMOG00000017162	PLA2G12A (ENSGMOG00000017185) #13	ENSGMOG00000026188 #14	ENSGMOG00000030193 #14	ENSGMOG00000027873	ENSGMOG00000017291 #14	MCUB (ENSGMOG00000017309) #15	lef1 (ENSGMOG00000017345) #22	hadh (ENSGMOG00000017363) #23	cyp2u1 (ENSGMOG00000017507) #24	sgms2a (ENSGMOG00000017521) #25	papss1 (ENSGMOG00000017531) #26	dkk2 (ENSGMOG00000032641)	aimp1a (ENSGMOG00000017576) #29	tbck (ENSGMOG00000017587) #30	npnta (ENSGMOG00000035197) #31	gstcd (ENSGMOG00000017674) #32	ints12 (ENSGMOG00000017716) #33	ARHGEF38 (ENSGMOG00000017732) #34	ENSGMOG00000017772 #34	ppa2 (ENSGMOG00000017788) #35	TET2 (ENSGMOG00000033378) #36	CXXC4 (ENSGMOG00000019812) #37
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00970000198226	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00940000161510	ENSGT00940000156796.c.b	ENSGT00940000166257	ENSGT00940000156796.c.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Pinecone sodierfish	MODERN SPECIES		ENSMMDG00005008476	ENSMMDG00005008483	ENSMMDG00005008494	ITLN1 (ENSMMDG00005008500)	crmp1 (ENSMMDG00005008507)	WFS1 (ENSMMDG00005008511)	ppp2r2ca (ENSMMDG00005008515)	ENSMMDG00005008519	hpf1 (ENSMMDG00005008525)	ENSMMDG00005008531	ENSMMDG00005008691	ENSMMDG00005008695	ENSMMDG00005008698	casp6a (ENSMMDG00005008699) #14	ENSMMDG00005008700 #15	lef1 (ENSMMDG00005008705) #22	hadh (ENSMMDG00005008710) #23	cyp2u1 (ENSMMDG00005008716) #24	sgms2a (ENSMMDG00005008725) #25	papss1 (ENSMMDG00005008865) #26	dkk2 (ENSMMDG00005009215)	aimp1a (ENSMMDG00005009224) #29	tbck (ENSMMDG00005009260) #30	ENSMMDG00005009508	npnta (ENSMMDG00005009661) #31	gstcd (ENSMMDG00005009941) #32	ints12 (ENSMMDG00005009945) #33	ARHGEF38 (ENSMMDG00005009949) #34	ppa2 (ENSMMDG00005009960) #35	TET2 (ENSMMDG00005009989) #36	CXXC4 (ENSMMDG00005009998) #37
Percomorphaceae	ANCESTRAL SPECIES	17	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00940000166257	ENSGT00940000156796.c.b	ENSGT00940000161510	ENSGT00940000156796.c.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33
Tiger tail seahorse	MODERN SPECIES	518	anp32b (ENSHCOG00000004637)	trmo (ENSHCOG00000004618)	ENSHCOG00000004605	sh3gl2a (ENSHCOG00000004568)	ENSHCOG00000004546	bnc2 (ENSHCOG00000004521)	ENSHCOG00000004478	ENSHCOG00000000121	ENSHCOG00000000120	snapc3 (ENSHCOG00000004441)	TTC39B (ENSHCOG00000004429)	dnajb14 (ENSHCOG00000004415)	pla2g12a (ENSHCOG00000004405) #13	casp6a (ENSHCOG00000004398) #14	MCUB (ENSHCOG00000004388) #15	lef1 (ENSHCOG00000004370) #22	hadh (ENSHCOG00000004334) #23	cyp2u1 (ENSHCOG00000004328) #24	sgms2a (ENSHCOG00000004321) #25	papss1 (ENSHCOG00000004311) #26	dkk2 (ENSHCOG00000004288)	aimp1a (ENSHCOG00000004278) #29	tbck (ENSHCOG00000004247) #30	ENSHCOG00000004208	ENSHCOG00000004178	npnta (ENSHCOG00000004139) #31	gstcd (ENSHCOG00000004127) #32	ints12 (ENSHCOG00000004115) #33	ARHGEF38 (ENSHCOG00000004074) #34	ppa2 (ENSHCOG00000003790) #35	TET2 (ENSHCOG00000003746) #36
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00940000166257	ENSGT00940000161510	ENSGT00940000156796.c.a.e.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00940000155191.a.b	ENSGT00940000166257.l	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00940000155191.a.b	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Anabantaria	ANCESTRAL SPECIES	1	ENSGT01010000228726	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00940000166257.l	ENSGT00940000155191.a.b	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00940000155191.a.b	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Climbing perch	MODERN SPECIES		ENSATEG00000014682	ENSATEG00000029844	sh3gl2a (ENSATEG00000014713)	CNTLN (ENSATEG00000014751)	bnc2 (ENSATEG00000014821)	ENSATEG00000014908	SNAPC3 (ENSATEG00000014933)	TTC39B (ENSATEG00000014953)	ENSATEG00000015046	PLA2G12A (ENSATEG00000015055) #13	CASP6 (ENSATEG00000015084) #14	ENSATEG00000027126	ENSATEG00000029187 #14	MCUB (ENSATEG00000027969) #15	MCUB (ENSATEG00000015173) #15	lef1 (ENSATEG00000015220) #22	ENSATEG00000029531	CYP2U1 (ENSATEG00000015287) #24	sgms2a (ENSATEG00000015292) #25	papss1 (ENSATEG00000015312) #26	dkk2 (ENSATEG00000015345)	aimp1a (ENSATEG00000029193) #29	tbck (ENSATEG00000015402) #30	ENSATEG00000015801	ENSATEG00000015678	ENSATEG00000015847	ENSATEG00000026770	ENSATEG00000025691	ENSATEG00000015731	ENSATEG00000015877	npnta (ENSATEG00000015897) #31
Siamese fighting fish	MODERN SPECIES		lsm6 (ENSBSLG00000000379)	bnc2 (ENSBSLG00000000369)	PSIP1 (ENSBSLG00000000339)	snapc3 (ENSBSLG00000000329)	TTC39B (ENSBSLG00000000186)	pla2g12a (ENSBSLG00000000094) #13	ENSBSLG00000000093 #14	ENSBSLG00000000092 #14	ENSBSLG00000000091	ENSBSLG00000000090	ENSBSLG00000000089 #14	ENSBSLG00000000088 #14	ENSBSLG00000000087 #14	ENSBSLG00000000086 #14	MCUB (ENSBSLG00000000085) #15	lef1 (ENSBSLG00000000084) #22	ENSBSLG00000000083	cyp2u1 (ENSBSLG00000000082) #24	uso1 (ENSBSLG00000000081)	g3bp2a (ENSBSLG00000000080)	pkd2 (ENSBSLG00000000079)	abcg2d (ENSBSLG00000000078)	ppm1kb (ENSBSLG00000000077)	herc3 (ENSBSLG00000000076)	ENSBSLG00000000075	FAM13A (ENSBSLG00000000074)	ENSBSLG00000000073	zgc:154142 (ENSBSLG00000000072)	ENSBSLG00000000071	elmod2 (ENSBSLG00000000070)	npnta (ENSBSLG00000000069) #31
Zig-zag eel	MODERN SPECIES		anp32b (ENSMAMG00000015348)	TRMO (ENSMAMG00000015361)	ENSMAMG00000015377	ENSMAMG00000015406	sh3gl2a (ENSMAMG00000015411)	CNTLN (ENSMAMG00000015458)	bnc2 (ENSMAMG00000015501)	ENSMAMG00000015548	ENSMAMG00000025762	SNAPC3 (ENSMAMG00000015560)	TTC39B (ENSMAMG00000015572)	ENSMAMG00000015593	PLA2G12A (ENSMAMG00000025639) #13	ENSMAMG00000015607 #14	MCUB (ENSMAMG00000015635) #15	lef1 (ENSMAMG00000015643) #22	hadh (ENSMAMG00000015669) #23	cyp2u1 (ENSMAMG00000015679) #24	sgms2a (ENSMAMG00000015685) #25	papss1 (ENSMAMG00000015701) #26	dkk2 (ENSMAMG00000015742)	aimp1a (ENSMAMG00000015765) #29	tbck (ENSMAMG00000015786) #30	ENSMAMG00000015817	ENSMAMG00000015825	ENSMAMG00000015835	ENSMAMG00000015849	ENSMAMG00000015865	ENSMAMG00000026065	npnta (ENSMAMG00000015897) #31	gstcd (ENSMAMG00000015934) #32
Carangaria	ANCESTRAL SPECIES		ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Carangaria_A	ANCESTRAL SPECIES	14	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Barramundi perch	MODERN SPECIES	284						sh3gl2a (ENSLCAG00010005275)	ENSLCAG00010005251	bnc2 (ENSLCAG00010005232)	PSIP1 (ENSLCAG00010005218)	snapc3 (ENSLCAG00010005207)	TTC39B (ENSLCAG00010005202)	dnajb14 (ENSLCAG00010005194)	pla2g12a (ENSLCAG00010005189) #13	casp6a (ENSLCAG00010005183) #14	MCUB (ENSLCAG00010005181) #15	lef1 (ENSLCAG00010005178) #22	hadh (ENSLCAG00010005167) #23	cyp2u1 (ENSLCAG00010005111) #24	sgms2a (ENSLCAG00010005095) #25	papss1 (ENSLCAG00010004973) #26	dkk2 (ENSLCAG00010004941)	aimp1a (ENSLCAG00010004932) #29	tbck (ENSLCAG00010004851) #30	ENSLCAG00010004820
Seriola	ANCESTRAL SPECIES	18	ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Greater amberjack	MODERN SPECIES	177							bnc2 (ENSSDUG00000001612)	ENSSDUG00000001638	snapc3 (ENSSDUG00000001704)	TTC39B (ENSSDUG00000001743)	dnajb14 (ENSSDUG00000001838)	pla2g12a (ENSSDUG00000001850) #13	pla2g12a (ENSSDUG00000001867) #13	casp6a (ENSSDUG00000001890) #14	MCUB (ENSSDUG00000001920) #15	lef1 (ENSSDUG00000001937) #22	hadh (ENSSDUG00000001972) #23	cyp2u1 (ENSSDUG00000001985) #24	sgms2a (ENSSDUG00000001995) #25	papss1 (ENSSDUG00000002013) #26	dkk2 (ENSSDUG00000002053)	aimp1a (ENSSDUG00000002067) #29	tbck (ENSSDUG00000002100) #30	ENSSDUG00000002209	npnta (ENSSDUG00000002246) #31	gstcd (ENSSDUG00000002259) #32	ints12 (ENSSDUG00000002296) #33	ARHGEF38 (ENSSDUG00000002327) #34	ppa2 (ENSSDUG00000002358) #35	TET2 (ENSSDUG00000002400) #36	CXXC4 (ENSSDUG00000002428) #37
Yellowtail amberjack	MODERN SPECIES	3166	trmo (ENSSLDG00000023112)	ENSSLDG00000023129	sh3gl2a (ENSSLDG00000023184)	ENSSLDG00000023215	ENSSLDG00000023237	bnc2 (ENSSLDG00000023268)	ENSSLDG00000023325	ENSSLDG00000023338	snapc3 (ENSSLDG00000023354)	TTC39B (ENSSLDG00000023365)	dnajb14 (ENSSLDG00000023379)	pla2g12a (ENSSLDG00000023397) #13	pla2g12a (ENSSLDG00000023403) #13	casp6a (ENSSLDG00000023413) #14	MCUB (ENSSLDG00000023433) #15	lef1 (ENSSLDG00000023447) #22	hadh (ENSSLDG00000023472) #23	cyp2u1 (ENSSLDG00000023490) #24	sgms2a (ENSSLDG00000023496) #25	papss1 (ENSSLDG00000023505) #26	dkk2 (ENSSLDG00000023524)	aimp1a (ENSSLDG00000023538) #29	tbck (ENSSLDG00000023574) #30	ENSSLDG00000023640
Pleuronectoidei	ANCESTRAL SPECIES	21	ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Tongue sole	MODERN SPECIES	19	g3bp2a (ENSCSEG00000009591)	uso1 (ENSCSEG00000009613)	coro2aa (ENSCSEG00000009640)	anp32b (ENSCSEG00000009653)	trmo (ENSCSEG00000009666)	ENSCSEG00000009669	sh3gl2a (ENSCSEG00000009692)	bnc2 (ENSCSEG00000009710)	PSIP1 (ENSCSEG00000009731)	snapc3 (ENSCSEG00000009790)	TTC39B (ENSCSEG00000009806)	dnajb14 (ENSCSEG00000009833)	pla2g12a (ENSCSEG00000009836) #13	casp6a (ENSCSEG00000009858) #14	ENSCSEG00000009844 #15	lef1 (ENSCSEG00000009871) #22	ENSCSEG00000009897	cdc6 (ENSCSEG00000009911)	ugp2a (ENSCSEG00000009922)	MDH1 (ENSCSEG00000009948)	commd1 (ENSCSEG00000009966)	vps54 (ENSCSEG00000010003)	ENSCSEG00000010083	ENSCSEG00000010124	ifngr1 (ENSCSEG00000010604)	ltv1 (ENSCSEG00000010617)	ENSCSEG00000010630	capn9 (ENSCSEG00000010637)	taf5l (ENSCSEG00000010683)	nup133 (ENSCSEG00000010705)	ENSCSEG00000010795
Turbot	MODERN SPECIES	20	anp32b (ENSSMAG00000006150)	TRMO (ENSSMAG00000006315)	ENSSMAG00000006333	ENSSMAG00000006349	sh3gl2a (ENSSMAG00000006359)	CNTLN (ENSSMAG00000006501)	bnc2 (ENSSMAG00000006631)	ENSSMAG00000006676	SNAPC3 (ENSSMAG00000006705)	TTC39B (ENSSMAG00000006732)	ENSSMAG00000006769	PLA2G12A (ENSSMAG00000006813) #13	ENSSMAG00000006830 #14	MCUB (ENSSMAG00000025927) #15	ENSSMAG00000032699	lef1 (ENSSMAG00000006863) #22	ENSSMAG00000022426	CYP2U1 (ENSSMAG00000006946) #24	sgms2a (ENSSMAG00000006951) #25	papss1 (ENSSMAG00000006962) #26	papss1 (ENSSMAG00000037785) #26	dkk2 (ENSSMAG00000021635)	aimp1a (ENSSMAG00000007003) #29	tbck (ENSSMAG00000007041) #30	ENSSMAG00000007192	npnta (ENSSMAG00000007216) #31	gstcd (ENSSMAG00000007270) #32	ints12 (ENSSMAG00000037653) #33	ARHGEF38 (ENSSMAG00000007336) #34	ppa2 (ENSSMAG00000007385) #35	TET2 (ENSSMAG00000007440) #36
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00940000155191.a.b	ENSGT00940000166257.l	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00950000182907.a.b.b.a	ENSGT00910000146604	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.f	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Fugu	MODERN SPECIES	8	anp32b (ENSTRUG00000010757)	trmo (ENSTRUG00000010684)	ENSTRUG00000020831	ENSTRUG00000010676	sh3gl2a (ENSTRUG00000010559)	CNTLN (ENSTRUG00000010460)	bnc2 (ENSTRUG00000022444)	PSIP1 (ENSTRUG00000024353)	snapc3 (ENSTRUG00000009904)	TTC39B (ENSTRUG00000009393)	dnajb14 (ENSTRUG00000009175)	pla2g12a (ENSTRUG00000025166) #13	casp6a (ENSTRUG00000009005) #14	MCUB (ENSTRUG00000020031) #15	ENSTRUG00000029025	lef1 (ENSTRUG00000008652) #22	hadh (ENSTRUG00000025695) #23	cyp2u1 (ENSTRUG00000008392) #24	sgms2a (ENSTRUG00000008227) #25	papss1 (ENSTRUG00000007964) #26	dkk2 (ENSTRUG00000020351)	aimp1a (ENSTRUG00000007708) #29	tbck (ENSTRUG00000007131) #30	ALOXE3 (ENSTRUG00000006230)	npnta (ENSTRUG00000005796) #31	gstcd (ENSTRUG00000005592) #32	ints12 (ENSTRUG00000005424) #33	ARHGEF38 (ENSTRUG00000021868) #34	ppa2 (ENSTRUG00000004694) #35	TET2 (ENSTRUG00000025759) #36	CXXC4 (ENSTRUG00000004403) #37
Tetraodon	MODERN SPECIES	10	coro2aa (ENSTNIG00000011042)	anp32b (ENSTNIG00000011041)	ENSTNIG00000011040	trmo (ENSTNIG00000011039)	ENSTNIG00000011038	sh3gl2a (ENSTNIG00000011037)	ENSTNIG00000011036	ENSTNIG00000000563	psip1a (ENSTNIG00000018015)	snapc3 (ENSTNIG00000018016)	TTC39B (ENSTNIG00000018017)	dnajb14 (ENSTNIG00000018018)	pla2g12a (ENSTNIG00000018019) #13	casp6a (ENSTNIG00000018020) #14	MCUB (ENSTNIG00000018021) #15	lef1 (ENSTNIG00000018022) #22	hadh (ENSTNIG00000018023) #23	cyp2u1 (ENSTNIG00000018024) #24	papss1 (ENSTNIG00000018025) #26	dkk2 (ENSTNIG00000018026)	aimp1a (ENSTNIG00000018027) #29	tbck (ENSTNIG00000018028) #30	ALOXE3 (ENSTNIG00000018029)	npnta (ENSTNIG00000018030) #31	gstcd (ENSTNIG00000018031) #32	ints12 (ENSTNIG00000018032) #33	ARHGEF38 (ENSTNIG00000018033) #34	ppa2 (ENSTNIG00000018034) #35	ENSTNIG00000018035 #36	CXXC4 (ENSTNIG00000018036) #37	CDKN2B (ENSTNIG00000018037)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.c.b	ENSGT00940000161510.bb.b.a	ENSGT00940000156796.c.a.e.b.c.a	ENSGT00940000161510.bb.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Ballan wrasse	MODERN SPECIES	21	coro2aa (ENSLBEG00000016221)	anp32b (ENSLBEG00000016190)	trmo (ENSLBEG00000016166)	ENSLBEG00000016114	sh3gl2a (ENSLBEG00000015982)	CNTLN (ENSLBEG00000015865)	bnc2 (ENSLBEG00000015768)	ENSLBEG00000015700	ENSLBEG00000015662	snapc3 (ENSLBEG00000015639)	TTC39B (ENSLBEG00000015507)	dnajb14 (ENSLBEG00000015455)	pla2g12a (ENSLBEG00000015228) #13	CASP6 (ENSLBEG00000015108) #14	MCUB (ENSLBEG00000015058) #15	lef1 (ENSLBEG00000014986) #22	hadh (ENSLBEG00000014926) #23	cyp2u1 (ENSLBEG00000014883) #24	sgms2a (ENSLBEG00000014865) #25	papss1 (ENSLBEG00000014815) #26	dkk2 (ENSLBEG00000014786)	aimp1a (ENSLBEG00000014734) #29	tbck (ENSLBEG00000014521) #30
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000161510.bb.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Perciformes	ANCESTRAL SPECIES	2	ENSGT00910000146604	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000161510.bb.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00950000182907.a.b.b.a	ENSGT00910000146604	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000161510.bb.b.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Stickleback	MODERN SPECIES	4	ENSGACG00000017374	trmo (ENSGACG00000017375)	ENSGACG00000017382	ENSGACG00000017385	ENSGACG00000017386	sh3gl2a (ENSGACG00000017387)	CNTLN (ENSGACG00000017390)	bnc2 (ENSGACG00000017398)	PSIP1 (ENSGACG00000017401)	snapc3 (ENSGACG00000017405)	TTC39B (ENSGACG00000017412)	dnajb14 (ENSGACG00000017429)	pla2g12a (ENSGACG00000017439) #13	casp6a (ENSGACG00000017443) #14	MCUB (ENSGACG00000017450) #15	lef1 (ENSGACG00000017458) #22	cyp2u1 (ENSGACG00000017462) #24	sgms2a (ENSGACG00000017492) #25	papss1 (ENSGACG00000017494) #26	dkk2 (ENSGACG00000017496)	aimp1a (ENSGACG00000017501) #29	tbck (ENSGACG00000017502) #30	npnta (ENSGACG00000017519) #31	gstcd (ENSGACG00000017529) #32	ints12 (ENSGACG00000017536) #33	ARHGEF38 (ENSGACG00000017541) #34	ENSGACG00000017545 #34	ppa2 (ENSGACG00000017548) #35	ENSGACG00000017550 #36	CXXC4 (ENSGACG00000017555) #37	ENSGACG00000017556
Lumpfish	MODERN SPECIES		uso1 (ENSCLMG00005000204)	coro2aa (ENSCLMG00005012080)	ENSCLMG00005012077	anp32b (ENSCLMG00005012076)	trmo (ENSCLMG00005012075)	ENSCLMG00005012074	ENSCLMG00005012073	sh3gl2a (ENSCLMG00005012072)	ENSCLMG00005012070	snapc3 (ENSCLMG00005012069)	TTC39B (ENSCLMG00005012068)	dnajb14 (ENSCLMG00005012067)	pla2g12a (ENSCLMG00005012065) #13	casp6a (ENSCLMG00005012064) #14	MCUB (ENSCLMG00005012063) #15	lef1 (ENSCLMG00005012062) #22	ENSCLMG00005012061	cyp2u1 (ENSCLMG00005012060) #24	sgms2a (ENSCLMG00005012059) #25	papss1 (ENSCLMG00005011263) #26	dkk2 (ENSCLMG00005011258)	aimp1a (ENSCLMG00005011257) #29	tbck (ENSCLMG00005011152) #30	ENSCLMG00005011149	npnta (ENSCLMG00005011142) #31	gstcd (ENSCLMG00005011131) #32	ints12 (ENSCLMG00005011129) #33	ARHGEF38 (ENSCLMG00005011127) #34	ppa2 (ENSCLMG00005011126) #35	TET2 (ENSCLMG00005011122) #36	CXXC4 (ENSCLMG00005011121) #37
Perciformes_a	ANCESTRAL SPECIES		ENSGT01010000228726	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000161510.bb.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Channel bull blenny	MODERN SPECIES		coro2aa (ENSCGOG00000000250)	anp32b (ENSCGOG00000000241)	trmo (ENSCGOG00000000228)	ENSCGOG00000000222	ENSCGOG00000000218	SH3GL2 (ENSCGOG00000000142)	bnc2 (ENSCGOG00000014160)	ENSCGOG00000014156	ENSCGOG00000014151	snapc3 (ENSCGOG00000014150)	TTC39B (ENSCGOG00000013691)	dnajb14 (ENSCGOG00000013623)	pla2g12a (ENSCGOG00000013622) #13	casp6a (ENSCGOG00000013620) #14	MCUB (ENSCGOG00000013615) #15	lef1 (ENSCGOG00000013599) #22	ENSCGOG00000013353	cyp2u1 (ENSCGOG00000013287) #24	sgms2a (ENSCGOG00000013284) #25	papss1 (ENSCGOG00000011408) #26	dkk2 (ENSCGOG00000011331)	aimp1a (ENSCGOG00000011329) #29	tbck (ENSCGOG00000010212) #30	ENSCGOG00000010181	ENSCGOG00000010068	ENSCGOG00000010061	npnta (ENSCGOG00000010047) #31	gstcd (ENSCGOG00000010034) #32	ints12 (ENSCGOG00000010030) #33	ARHGEF38 (ENSCGOG00000010026) #34	TET2 (ENSCGOG00000010016) #36
Pike perch	MODERN SPECIES	45	ENSSLUG00000002746	anp32b (ENSSLUG00000002742)	trmo (ENSSLUG00000002737)	ENSSLUG00000002723	ENSSLUG00000002711	sh3gl2a (ENSSLUG00000002698)	bnc2 (ENSSLUG00000002662)	ENSSLUG00000002652	ENSSLUG00000002645	snapc3 (ENSSLUG00000002640)	TTC39B (ENSSLUG00000002628)	dnajb14 (ENSSLUG00000002624)	pla2g12a (ENSSLUG00000002613) #13	casp6a (ENSSLUG00000002604) #14	MCUB (ENSSLUG00000002599) #15	lef1 (ENSSLUG00000002593) #22	hadh (ENSSLUG00000002585) #23	cyp2u1 (ENSSLUG00000002524) #24	sgms2a (ENSSLUG00000002502) #25	papss1 (ENSSLUG00000002199) #26	ENSSLUG00000002143	dkk2 (ENSSLUG00000002133)	aimp1a (ENSSLUG00000002129) #29	tbck (ENSSLUG00000002020) #30	npnta (ENSSLUG00000001853) #31	gstcd (ENSSLUG00000001775) #32	ints12 (ENSSLUG00000001767) #33	ARHGEF38 (ENSSLUG00000001753) #34	ppa2 (ENSSLUG00000001711) #35	TET2 (ENSSLUG00000001662) #36	CXXC4 (ENSSLUG00000001615) #37
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.c.b	ENSGT00940000161510.bb.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Gilthead seabream	MODERN SPECIES		anp32b (ENSSAUG00010016959)	trmo (ENSSAUG00010016964)	ENSSAUG00010016969	ENSSAUG00010016970	sh3gl2a (ENSSAUG00010016977)	CNTLN (ENSSAUG00010016997)	bnc2 (ENSSAUG00010017001)	PSIP1 (ENSSAUG00010017014)	snapc3 (ENSSAUG00010017016)	TTC39B (ENSSAUG00010017034)	dnajb14 (ENSSAUG00010017579)	PLA2G12A (ENSSAUG00010017581) #13	CASP6 (ENSSAUG00010017589) #14	CASP6 (ENSSAUG00010017602) #14	MCUB (ENSSAUG00010017605) #15	lef1 (ENSSAUG00010017607) #22	hadh (ENSSAUG00010017665) #23	cyp2u1 (ENSSAUG00010017666) #24	sgms2a (ENSSAUG00010017667) #25	papss1 (ENSSAUG00010017671) #26	dkk2 (ENSSAUG00010018482)	aimp1a (ENSSAUG00010018483) #29	tbck (ENSSAUG00010018488) #30	ENSSAUG00010018531	ENSSAUG00010018540	ENSSAUG00010018544	npnta (ENSSAUG00010018549) #31	gstcd (ENSSAUG00010018641) #32	ints12 (ENSSAUG00010018684) #33	ARHGEF38 (ENSSAUG00010018687) #34	ppa2 (ENSSAUG00010018692) #35
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00960000190222	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.c.b	ENSGT00940000161510.bb.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
European seabass	MODERN SPECIES	20	coro2aa (ENSDLAG00005010461)	anp32b (ENSDLAG00005010361)	TRMO (ENSDLAG00005010342)	ENSDLAG00005010320	ENSDLAG00005010314	sh3gl2a (ENSDLAG00005030726)	CNTLN (ENSDLAG00005029895)	bnc2 (ENSDLAG00005010217)	ENSDLAG00005030701	SNAPC3 (ENSDLAG00005010205)	TTC39B (ENSDLAG00005009905)	ENSDLAG00005009883	PLA2G12A (ENSDLAG00005009873) #13	ENSDLAG00005009860 #14	MCUB (ENSDLAG00005009854) #15	lef1 (ENSDLAG00005009739) #22	HADH (ENSDLAG00005009678) #23	cyp2u1 (ENSDLAG00005009666) #24	papss1 (ENSDLAG00005009340) #26	dkk2 (ENSDLAG00005009325)	SGMS2 (ENSDLAG00005009658) #25	aimp1a (ENSDLAG00005009303) #29	tbck (ENSDLAG00005009196) #30	ENSDLAG00005008986	npnta (ENSDLAG00005008770) #31	gstcd (ENSDLAG00005008704) #32	ints12 (ENSDLAG00005008683) #33	ARHGEF38 (ENSDLAG00005008659) #34	ppa2 (ENSDLAG00005008369) #35	TET2 (ENSDLAG00005008342) #36	CXXC4 (ENSDLAG00005029513) #37
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005007398	trmo (ENSLCRG00005007396)	ENSLCRG00005007395	ENSLCRG00005007393	sh3gl2a (ENSLCRG00005006998)	CNTLN (ENSLCRG00005006986)	bnc2 (ENSLCRG00005006971)	ENSLCRG00005006967	ENSLCRG00005006966	snapc3 (ENSLCRG00005006965)	ENSLCRG00005006962	TTC39B (ENSLCRG00005006531)	dnajb14 (ENSLCRG00005006518)	casp6a (ENSLCRG00005006514) #14	ENSLCRG00005006513 #15	lef1 (ENSLCRG00005006498) #22	hadh (ENSLCRG00005006494) #23	cyp2u1 (ENSLCRG00005006492) #24	sgms2a (ENSLCRG00005006489) #25	ENSLCRG00005006487	ENSLCRG00005006485 #24	sgms2a (ENSLCRG00005006482) #25	papss1 (ENSLCRG00005005706) #26	dkk2 (ENSLCRG00005005694)	aimp1a (ENSLCRG00005005691) #29	tbck (ENSLCRG00005005651) #30	ENSLCRG00005005622	ENSLCRG00005005621	ENSLCRG00005005565	npnta (ENSLCRG00005005549) #31	gstcd (ENSLCRG00005005544) #32
Ovalentaria	ANCESTRAL SPECIES		ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00940000156796.c.a.e.a	ENSGT00940000166257	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Atherinomorphae	ANCESTRAL SPECIES	20	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708.i	ENSGT00940000153942.a.e.a	ENSGT00390000005708.j.a	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Oryzias	ANCESTRAL SPECIES	15	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00390000005708.j.a	ENSGT00940000153942.a.e.a	ENSGT00940000154706.rb.b	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.cb #14	ENSGT00940000155140.bb #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000166257.x	ENSGT00940000161510.q	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446.a #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Oryzias_a	ANCESTRAL SPECIES	23	ENSGT00940000162224	ENSGT00390000015958.c	ENSGT00940000157294.c	ENSGT00730000111645.b	ENSGT00390000011412	ENSGT00940000161376	ENSGT00390000005708.j.a	ENSGT00940000153942.a.e.a	ENSGT00940000154706.rb.b	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.cb #14	ENSGT00940000155140.bb #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000166257.x	ENSGT00940000178012	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446.a #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Chinese medaka	MODERN SPECIES	431																lef1 (ENSOSIG00000012034) #22	cyp2u1 (ENSOSIG00000012029) #24	sgms2a (ENSOSIG00000012027) #25	papss1 (ENSOSIG00000010550) #26	dkk2 (ENSOSIG00000010533)	aimp1a (ENSOSIG00000010531) #29	tbck (ENSOSIG00000010522) #30
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000019420	mttp (ENSORLG00000019412)	TSPAN5 (ENSORLG00000019402)	snapc3 (ENSORLG00000030074)	ENSORLG00000030618	ENSORLG00000020443	ENSORLG00000023382	ENSORLG00000027705	ENSORLG00000023797	dnajb14 (ENSORLG00000030029)	ENSORLG00000019606 #14	CASP6 (ENSORLG00000018997) #14	ENSORLG00000019600 #15	ENSORLG00000029994	ENSORLG00000028538	lef1 (ENSORLG00000006924) #22	hadh (ENSORLG00000006891) #23	cyp2u1 (ENSORLG00000006861) #24	sgms2a (ENSORLG00000030047) #25	papss1 (ENSORLG00000006836) #26	dkk2 (ENSORLG00000006785)	aimp1a (ENSORLG00000006773) #29	tbck (ENSORLG00000006742) #30	ENSORLG00000006725	npnta (ENSORLG00000006656) #31	gstcd (ENSORLG00000006613) #32	ints12 (ENSORLG00000006592) #33	ARHGEF38 (ENSORLG00000006577) #34	ppa2 (ENSORLG00000006564) #35	TET2 (ENSORLG00000022090) #36	CXXC4 (ENSORLG00000006474) #37
Oryzias_b	ANCESTRAL SPECIES	21	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00390000005708.j.a	ENSGT00940000154706.rb.b	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.cb #14	ENSGT00940000155140.bb #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000166257.x	ENSGT00940000161510.q	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446.a #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Javanese ricefish	MODERN SPECIES		coro2aa (ENSOJAG00000002437)	anp32b (ENSOJAG00000002470)	trmo (ENSOJAG00000002498)	ENSOJAG00000002513	sh3gl2a (ENSOJAG00000002576)	ENSOJAG00000002736	bnc2 (ENSOJAG00000002762)	snapc3 (ENSOJAG00000002782)	ENSOJAG00000002795	ENSOJAG00000002829	dnajb14 (ENSOJAG00000002918)	pla2g12a (ENSOJAG00000002931) #13	CASP6 (ENSOJAG00000002954) #14	CASP6 (ENSOJAG00000002964) #14	MCUB (ENSOJAG00000002975) #15	lef1 (ENSOJAG00000003006) #22	ENSOJAG00000003031	cyp2u1 (ENSOJAG00000003051) #24	ENSOJAG00000003160 #32	glb1 (ENSOJAG00000003192)	sgms2a (ENSOJAG00000003220) #25	papss1 (ENSOJAG00000003251) #26	dkk2 (ENSOJAG00000003491)	aimp1a (ENSOJAG00000003494) #29	tbck (ENSOJAG00000003624) #30	ENSOJAG00000004091	npnta (ENSOJAG00000004388) #31	gstcd (ENSOJAG00000004518) #32	ints12 (ENSOJAG00000004828) #33	ENSOJAG00000004849 #34	ppa2 (ENSOJAG00000004874) #35
Indian medaka	MODERN SPECIES	21	ENSOMEG00000005063	ENSOMEG00000005077	sh3gl2a (ENSOMEG00000005229)	ENSOMEG00000005353	bnc2 (ENSOMEG00000005391)	snapc3 (ENSOMEG00000005458)	ENSOMEG00000005526	ENSOMEG00000005692	dnajb14 (ENSOMEG00000005749)	pla2g12a (ENSOMEG00000005763) #13	CASP6 (ENSOMEG00000005778) #14	ENSOMEG00000005821 #14	CASP6 (ENSOMEG00000005877) #14	CASP6 (ENSOMEG00000005905) #14	MCUB (ENSOMEG00000005947) #15	lef1 (ENSOMEG00000005975) #22	hadh (ENSOMEG00000005991) #23	cyp2u1 (ENSOMEG00000006015) #24	sgms2a (ENSOMEG00000006023) #25	papss1 (ENSOMEG00000000132) #26	dkk2 (ENSOMEG00000000755)	aimp1a (ENSOMEG00000006090) #29	ENSOMEG00000006113	tbck (ENSOMEG00000006254) #30	ALOX15B (ENSOMEG00000006422)	npnta (ENSOMEG00000006485) #31	gstcd (ENSOMEG00000006538) #32	ints12 (ENSOMEG00000006563) #33	ARHGEF38 (ENSOMEG00000006598) #34	ppa2 (ENSOMEG00000006653) #35	TET2 (ENSOMEG00000006676) #36
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708.j.a	ENSGT00390000005708.j.b	ENSGT00940000169573	ENSGT00940000153942.a.e.a	ENSGT00390000005708.i	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00940000161510	ENSGT00940000166257	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Aplocheiloidei	ANCESTRAL SPECIES	17	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708.j.a	ENSGT00390000005708.j.b	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000155191.a.b	ENSGT00940000156796.c.a.e.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Mangrove rivulus	MODERN SPECIES		coro2aa (ENSKMAG00000002402)	anp32b (ENSKMAG00000002386)	trmo (ENSKMAG00000002369)	ENSKMAG00000002357	ENSKMAG00000002349	sh3gl2a (ENSKMAG00000002271)	CNTLN (ENSKMAG00000002221)	bnc2 (ENSKMAG00000002145)	ENSKMAG00000002111	ENSKMAG00000002097	TTC39B (ENSKMAG00000002037)	dnajb14 (ENSKMAG00000002026)	pla2g12a (ENSKMAG00000002001) #13	casp6a (ENSKMAG00000001983) #14	MCUB (ENSKMAG00000001979) #15	lef1 (ENSKMAG00000001920) #22	hadh (ENSKMAG00000001893) #23	cyp2u1 (ENSKMAG00000001804) #24	sgms2a (ENSKMAG00000001795) #25	papss1 (ENSKMAG00000001759) #26	dkk2 (ENSKMAG00000001744)	aimp1a (ENSKMAG00000001709) #29	tbck (ENSKMAG00000001587) #30	ENSKMAG00000001526	ENSKMAG00000001482	npnta (ENSKMAG00000001449) #31	ENSKMAG00000001380	gstcd (ENSKMAG00000001327) #32	ints12 (ENSKMAG00000001316) #33	ARHGEF38 (ENSKMAG00000001303) #34	ppa2 (ENSKMAG00000001296) #35
Turquoise killifish	MODERN SPECIES	1611	PGAM1A (ENSNFUG00015012935)	exosc1 (ENSNFUG00015012920)	C1H16ORF88 (ENSNFUG00015012910)	gprc5bb (ENSNFUG00015012899)	ENSNFUG00015012888	ENSNFUG00015012874	RAB33B (ENSNFUG00015012863)	naa15b (ENSNFUG00015010196)	ENSNFUG00015010006	ENSNFUG00015009983	SCOC (ENSNFUG00015009965)	CLGN (ENSNFUG00015008735)	exosc9 (ENSNFUG00015008492)	casp6a (ENSNFUG00015008416) #14	CCDC109B (ENSNFUG00015008408) #15	ENSNFUG00015008398 #22	ENSNFUG00015008394 #22	HADH (ENSNFUG00015008386) #23	SOD3 (ENSNFUG00015008382)	DHX15 (ENSNFUG00015007905)	ENSNFUG00015007847	slc22a7b.1 (ENSNFUG00015007834)	ENSNFUG00015007818	SYNPO2 (ENSNFUG00015007809)	myoz2b (ENSNFUG00015007801)	USP53B (ENSNFUG00015007793)	fabp2 (ENSNFUG00015007783)	GUCY1A3 (ENSNFUG00015007767)	UFSP2 (ENSNFUG00015007760)	gucy1b1 (ENSNFUG00015007645)	helt (ENSNFUG00015007622)
Cyprinodontoidei	ANCESTRAL SPECIES	24	ENSGT00940000176008	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708.i	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000154866.B.b	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000153431.b	ENSGT00860000134050	ENSGT00980000198902	ENSGT00940000156184.a	ENSGT00390000000909	ENSGT00940000157732.f.a	ENSGT00940000156696.B
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00940000176008	ENSGT00390000004643.d	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708.i	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000154866.B.b	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000153431.b	ENSGT00860000134050	ENSGT00980000198902	ENSGT00940000156184.a	ENSGT00390000000909	ENSGT00940000157732.f.a	ENSGT00940000156696.B
Poecilia	ANCESTRAL SPECIES	36	ENSGT00390000004643.d	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708.i	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00390000002634.a.f.b.a.a.a	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000154866.B.b	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000153431.b	ENSGT00860000134050	ENSGT00980000198902	ENSGT00940000156184.a	ENSGT00390000000909	ENSGT00940000157732.f.a	ENSGT00940000156696.B
NAME_6	ANCESTRAL SPECIES	177							ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708.i	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00390000002634.a.f.b.a.a.a	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000154866.B.b	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000153431.b	ENSGT00860000134050	ENSGT00980000198902	ENSGT00940000156184.a	ENSGT00390000000909	ENSGT00940000157732.f.a	ENSGT00940000156696.B
Sailfin molly	MODERN SPECIES	956								PSIP1 (ENSPLAG00000010795)	snapc3 (ENSPLAG00000010806)	TTC39B (ENSPLAG00000010848)	dnajb14 (ENSPLAG00000010890)	pla2g12a (ENSPLAG00000011035) #13	casp6a (ENSPLAG00000011197) #14	ENSPLAG00000011223	MCUB (ENSPLAG00000011234) #15	lef1 (ENSPLAG00000011269) #22	hadh (ENSPLAG00000011278) #23	cyp2u1 (ENSPLAG00000011289) #24	sgms2a (ENSPLAG00000011297) #25	papss1 (ENSPLAG00000011346) #26	dkk2 (ENSPLAG00000011359)
Amazon molly	MODERN SPECIES	367							bnc2 (ENSPFOG00000012019)	PSIP1 (ENSPFOG00000011851)	snapc3 (ENSPFOG00000011781)	TTC39B (ENSPFOG00000011474)	dnajb14 (ENSPFOG00000011370)	pla2g12a (ENSPFOG00000011335) #13	casp6a (ENSPFOG00000011254) #14	ENSPFOG00000011203	MCUB (ENSPFOG00000011075) #15	lef1 (ENSPFOG00000011035) #22	hadh (ENSPFOG00000010973) #23	cyp2u1 (ENSPFOG00000010924) #24	papss1 (ENSPFOG00000010859) #26	dkk2 (ENSPFOG00000010805)	aimp1a (ENSPFOG00000010749) #29	RIN2 (ENSPFOG00000010495)	SLC24A3 (ENSPFOG00000010286)	dtd1 (ENSPFOG00000010227)	SMIM26 (ENSPFOG00000010226)	ENSPFOG00000009887	slkb (ENSPFOG00000009525)	stn1 (ENSPFOG00000009409)	SH3PXD2A (ENSPFOG00000009258)	neurl1aa (ENSPFOG00000009159)	ENSPFOG00000007665
Guppy	MODERN SPECIES	439	trmo (ENSPREG00000002099)	ENSPREG00000002128	ENSPREG00000002193	sh3gl2a (ENSPREG00000002204)	CNTLN (ENSPREG00000002247)	bnc2 (ENSPREG00000002287)	ENSPREG00000002308	ENSPREG00000002334	snapc3 (ENSPREG00000002341)	TTC39B (ENSPREG00000002363)	dnajb14 (ENSPREG00000002423)	pla2g12a (ENSPREG00000002456) #13	casp6a (ENSPREG00000002479) #14	ENSPREG00000002488	MCUB (ENSPREG00000002496) #15	lef1 (ENSPREG00000002515) #22	hadh (ENSPREG00000002550) #23	cyp2u1 (ENSPREG00000002597) #24	ENSPREG00000002611	sgms2a (ENSPREG00000002621) #25	papss1 (ENSPREG00000002639) #26	dkk2 (ENSPREG00000002679)	aimp1a (ENSPREG00000002704) #29	RIN2 (ENSPREG00000002721)	SLC24A3 (ENSPREG00000002750)	dtd1 (ENSPREG00000002775)	ENSPREG00000002796	slkb (ENSPREG00000002838)	stn1 (ENSPREG00000002904)	SH3PXD2A (ENSPREG00000002929)	neurl1aa (ENSPREG00000003006)
Platyfish	MODERN SPECIES	19	sh3gl2a (ENSXMAG00000022099)	CNTLN (ENSXMAG00000010105)	ENSXMAG00000026048	ENSXMAG00000021385	bnc2 (ENSXMAG00000024270)	PSIP1 (ENSXMAG00000010112)	snapc3 (ENSXMAG00000010120)	TTC39B (ENSXMAG00000010134)	ENSXMAG00000023520	ENSXMAG00000029669	dnajb14 (ENSXMAG00000010157)	pla2g12a (ENSXMAG00000010172) #13	ENSXMAG00000010190	casp6a (ENSXMAG00000010181) #14	MCUB (ENSXMAG00000010197) #15	lef1 (ENSXMAG00000010205) #22	hadh (ENSXMAG00000010227) #23	cyp2u1 (ENSXMAG00000010239) #24	sgms2a (ENSXMAG00000010246) #25	papss1 (ENSXMAG00000021736) #26	dkk2 (ENSXMAG00000010254)	aimp1a (ENSXMAG00000010255) #29	RIN2 (ENSXMAG00000010264)	SLC24A3 (ENSXMAG00000010863)	dtd1 (ENSXMAG00000010278)	SMIM26 (ENSXMAG00000010293)	slkb (ENSXMAG00000010323)	stn1 (ENSXMAG00000010374)	SH3PXD2A (ENSXMAG00000010386)	neurl1aa (ENSXMAG00000010401)	ENSXMAG00000010410
NAME_4	ANCESTRAL SPECIES	169						ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708.i	ENSGT00390000005708.j.b	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000154866.B.b	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000153431.b	ENSGT00860000134050	ENSGT00940000156184.a	ENSGT00390000000909	ENSGT00940000157732.f.a.d	ENSGT00940000156696.B	ENSGT01030000234563.b.a.b.a.b.a.d
Sheepshead minnow	MODERN SPECIES	605												dnajb14 (ENSCVAG00000002213)	pla2g12a (ENSCVAG00000002220) #13	casp6a (ENSCVAG00000002225) #14	MCUB (ENSCVAG00000002232) #15	lef1 (ENSCVAG00000002247) #22	hadh (ENSCVAG00000002260) #23	cyp2u1 (ENSCVAG00000002264) #24	sgms2a (ENSCVAG00000002272) #25	papss1 (ENSCVAG00000002285) #26	dkk2 (ENSCVAG00000002289)	aimp1a (ENSCVAG00000002300) #29	RIN2 (ENSCVAG00000002311)
Mummichog	MODERN SPECIES	2256	rbm41 (ENSFHEG00000006026)	cldn2 (ENSFHEG00000006037)	ENSFHEG00000006046	CLIP2 (ENSFHEG00000006141)	GTF2IRD1 (ENSFHEG00000006231)	dtx2 (ENSFHEG00000000784)	tmem132e (ENSFHEG00000006482)	bnc2 (ENSFHEG00000006553)	ENSFHEG00000006582	snapc3 (ENSFHEG00000006597)	TTC39B (ENSFHEG00000006677)	dnajb14 (ENSFHEG00000006730)	pla2g12a (ENSFHEG00000006735) #13	casp6a (ENSFHEG00000006761) #14	ENSFHEG00000006772 #15	lef1 (ENSFHEG00000006805) #22
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.eb #14	ENSGT00940000155140.db #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.eb.b #14	ENSGT00940000155140.eb.a #14	ENSGT00940000155140.db #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.b	ENSGT00940000156796.c.a.e.b.a.b	ENSGT00940000166257	ENSGT00940000161510.ab	ENSGT00940000156796.c.a.e.b.a.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.eb.b #14	ENSGT00940000155140.eb.a #14	ENSGT00940000155140.db #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.b	ENSGT00940000156796.c.a.e.b.a.b	ENSGT00940000156796.c.a.e.b.a.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Lyretail cichlid	MODERN SPECIES	301	anp32b (ENSNBRG00000012026)	ENSNBRG00000012042	trmo (ENSNBRG00000012051)	ENSNBRG00000012069	sh3gl2a (ENSNBRG00000012125)	bnc2 (ENSNBRG00000012189)	ENSNBRG00000012300	ENSNBRG00000012312	TTC39B (ENSNBRG00000012328)	dnajb14 (ENSNBRG00000012370)	pla2g12a (ENSNBRG00000012392) #13	CASP6 (ENSNBRG00000012403) #14	CASP6 (ENSNBRG00000012429) #14	CASP6 (ENSNBRG00000012475) #14	MCUB (ENSNBRG00000012487) #15	lef1 (ENSNBRG00000012499) #22	ENSNBRG00000012520	cyp2u1 (ENSNBRG00000012526) #24	sgms2a (ENSNBRG00000012579) #25	papss1 (ENSNBRG00000012609) #26	dkk2 (ENSNBRG00000012636)	aimp1a (ENSNBRG00000012670) #29	tbck (ENSNBRG00000012699) #30	ENSNBRG00000012746	ENSNBRG00000012759	ENSNBRG00000012791	ENSNBRG00000012823	npnta (ENSNBRG00000012852) #31	gstcd (ENSNBRG00000012882) #32	ints12 (ENSNBRG00000012937) #33	ARHGEF38 (ENSNBRG00000012944) #34
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.eb.b #14	ENSGT00940000155140.eb.a #14	ENSGT00940000155140.db #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000161510.ab	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Burton s mouthbrooder	MODERN SPECIES	547									ENSHBUG00000016045	dnajb14 (ENSHBUG00000015994)	pla2g12a (ENSHBUG00000015968) #13	CASP6 (ENSHBUG00000015958) #14	CASP6 (ENSHBUG00000015951) #14	CASP6 (ENSHBUG00000015932) #14	MCUB (ENSHBUG00000015902) #15	lef1 (ENSHBUG00000015891) #22	ENSHBUG00000015864	cyp2u1 (ENSHBUG00000015834) #24	sgms2a (ENSHBUG00000015820) #25	papss1 (ENSHBUG00000015808) #26	dkk2 (ENSHBUG00000015781)	aimp1a (ENSHBUG00000015770) #29	tbck (ENSHBUG00000015730) #30	ENSHBUG00000015611	ENSHBUG00000015592	npnta (ENSHBUG00000015574) #31	gstcd (ENSHBUG00000015455) #32	ints12 (ENSHBUG00000015350) #33	ARHGEF38 (ENSHBUG00000015332) #34	ppa2 (ENSHBUG00000015295) #35	TET2 (ENSHBUG00000015020) #36
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.eb.b #14	ENSGT00940000155140.eb.a #14	ENSGT00940000155140.db #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.b	ENSGT00940000156796.c.a.e.b.a.b	ENSGT00940000156796.c.a.e.b.a.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
P. nyererei	MODERN SPECIES	317	anp32b (ENSPNYG00000010543)	trmo (ENSPNYG00000010524)	ENSPNYG00000010483	sh3gl2a (ENSPNYG00000010441)	ENSPNYG00000010397	bnc2 (ENSPNYG00000010353)	ENSPNYG00000010337	snapc3 (ENSPNYG00000010319)	TTC39B (ENSPNYG00000010287)	dnajb14 (ENSPNYG00000010257)	pla2g12a (ENSPNYG00000010243) #13	CASP6 (ENSPNYG00000010228) #14	CASP6 (ENSPNYG00000010206) #14	CASP6 (ENSPNYG00000010178) #14	MCUB (ENSPNYG00000010162) #15	lef1 (ENSPNYG00000010128) #22	ENSPNYG00000010101	cyp2u1 (ENSPNYG00000010070) #24	sgms2a (ENSPNYG00000010057) #25	papss1 (ENSPNYG00000010023) #26	dkk2 (ENSPNYG00000009981)	aimp1a (ENSPNYG00000009958) #29	tbck (ENSPNYG00000009915) #30	ENSPNYG00000009869	ENSPNYG00000009825	ENSPNYG00000009785	npnta (ENSPNYG00000009737) #31	gstcd (ENSPNYG00000009714) #32	ints12 (ENSPNYG00000009692) #33	ARHGEF38 (ENSPNYG00000009674) #34	ppa2 (ENSPNYG00000009619) #35
Haplochromini_B	ANCESTRAL SPECIES	8	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00940000153942.a.e.a	ENSGT00390000005708	ENSGT00940000169573	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.eb.b #14	ENSGT00940000155140.eb.a #14	ENSGT00940000155140.db #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000166803	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b.b	ENSGT00940000156796.c.a.e.b.a.b.a	ENSGT00940000156796.c.a.e.b.a.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Zebra mbuna	MODERN SPECIES	1109	ENSMZEG00005019501	sh3gl2a (ENSMZEG00005019518)	CNTLN (ENSMZEG00005019524)	bnc2 (ENSMZEG00005019538)	ENSMZEG00005019541	ENSMZEG00005019544	ENSMZEG00005019547	ENSMZEG00005019549	TTC39B (ENSMZEG00005019551)	dnajb14 (ENSMZEG00005019556)	pla2g12a (ENSMZEG00005019560) #13	CASP6 (ENSMZEG00005019561) #14	CASP6 (ENSMZEG00005019564) #14	CASP6 (ENSMZEG00005019570) #14	MCUB (ENSMZEG00005019577) #15	lef1 (ENSMZEG00005019602) #22	ENSMZEG00005019612	cyp2u1 (ENSMZEG00005019621) #24	sgms2a (ENSMZEG00005019624) #25	papss1 (ENSMZEG00005019630) #26	dkk2 (ENSMZEG00005019637)	aimp1a (ENSMZEG00005019638) #29	tbck (ENSMZEG00005019651) #30	ENSMZEG00005019669	ENSMZEG00005019673	ENSMZEG00005019686	ENSMZEG00005019690	npnta (ENSMZEG00005019704) #31	gstcd (ENSMZEG00005019714) #32	ints12 (ENSMZEG00005019718) #33	ARHGEF38 (ENSMZEG00005019722) #34
Eastern happy	MODERN SPECIES	18	ENSACLG00000022633	sh3gl2a (ENSACLG00000022586)	bnc2 (ENSACLG00000022554)	ENSACLG00000022459	ENSACLG00000022435	ENSACLG00000022412	snapc3 (ENSACLG00000022392)	TTC39B (ENSACLG00000022346)	dnajb14 (ENSACLG00000022293)	pla2g12a (ENSACLG00000022282) #13	ENSACLG00000022277	CASP6 (ENSACLG00000022244) #14	CASP6 (ENSACLG00000022221) #14	CASP6 (ENSACLG00000022196) #14	MCUB (ENSACLG00000022168) #15	lef1 (ENSACLG00000022123) #22	ENSACLG00000022067	cyp2u1 (ENSACLG00000022053) #24	sgms2a (ENSACLG00000022021) #25	papss1 (ENSACLG00000021989) #26	dkk2 (ENSACLG00000021982)	aimp1a (ENSACLG00000021930) #29	tbck (ENSACLG00000021641) #30	ENSACLG00000021571	ENSACLG00000021529	ENSACLG00000021481	npnta (ENSACLG00000021444) #31	gstcd (ENSACLG00000021418) #32	ints12 (ENSACLG00000021382) #33	ARHGEF38 (ENSACLG00000021358) #34	ppa2 (ENSACLG00000021305) #35
Nile tilapia	MODERN SPECIES	18	ENSONIG00000020567	sh3gl2a (ENSONIG00000017474)	CNTLN (ENSONIG00000017478)	bnc2 (ENSONIG00000031608)	ENSONIG00000032799	ENSONIG00000017484	snapc3 (ENSONIG00000017485)	TTC39B (ENSONIG00000017486)	dnajb14 (ENSONIG00000017488)	pla2g12a (ENSONIG00000017490) #13	CASP6 (ENSONIG00000017492) #14	CASP6 (ENSONIG00000017493) #14	CASP6 (ENSONIG00000017494) #14	MCUB (ENSONIG00000017498) #15	ST6GALNAC6 (ENSONIG00000037018)	lef1 (ENSONIG00000017499) #22	ENSONIG00000041268	ENSONIG00000017504	cyp2u1 (ENSONIG00000017505) #24	sgms2a (ENSONIG00000017507) #25	papss1 (ENSONIG00000017508) #26	dkk2 (ENSONIG00000017511)	aimp1a (ENSONIG00000017512) #29	tbck (ENSONIG00000017514) #30	ENSONIG00000017517	ENSONIG00000009404	npnta (ENSONIG00000017524) #31	gstcd (ENSONIG00000017528) #32	ENSONIG00000041364	ints12 (ENSONIG00000017530) #33	ARHGEF38 (ENSONIG00000017531) #34
Midas cichlid	MODERN SPECIES	500	trmo (ENSACIG00000018770)	ENSACIG00000018783	sh3gl2a (ENSACIG00000018810)	ENSACIG00000018822	ENSACIG00000018826	bnc2 (ENSACIG00000018850)	ENSACIG00000018874	ENSACIG00000018882	ENSACIG00000018890	ENSACIG00000018897	dnajb14 (ENSACIG00000018914)	pla2g12a (ENSACIG00000018966) #13	CASP6 (ENSACIG00000019047) #14	CASP6 (ENSACIG00000019065) #14	MCUB (ENSACIG00000019079) #15	lef1 (ENSACIG00000019111) #22	hadh (ENSACIG00000019122) #23	ENSACIG00000019159	ENSACIG00000019845	cyp2u1 (ENSACIG00000020086) #24	sgms2a (ENSACIG00000020126) #25	papss1 (ENSACIG00000020154) #26	dkk2 (ENSACIG00000020183)	aimp1a (ENSACIG00000020197) #29	tbck (ENSACIG00000020218) #30	ENSACIG00000020266	ENSACIG00000020299	npnta (ENSACIG00000020323) #31	gstcd (ENSACIG00000020347) #32	ints12 (ENSACIG00000020365) #33	ARHGEF38 (ENSACIG00000020379) #34
Pomacentridae	ANCESTRAL SPECIES	8	ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000156796.c.a.e.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Bicolor damselfish	MODERN SPECIES	247								bnc2 (ENSSPAG00000001833)	PSIP1 (ENSSPAG00000001767)	snapc3 (ENSSPAG00000001746)	TTC39B (ENSSPAG00000001714)	dnajb14 (ENSSPAG00000001667)	pla2g12a (ENSSPAG00000001658) #13	casp6a (ENSSPAG00000001627) #14	MCUB (ENSSPAG00000001613) #15	lef1 (ENSSPAG00000001570) #22	hadh (ENSSPAG00000001343) #23	cyp2u1 (ENSSPAG00000001313) #24	sgms2a (ENSSPAG00000001299) #25	papss1 (ENSSPAG00000001237) #26	dkk2 (ENSSPAG00000001202)	aimp1a (ENSSPAG00000001190) #29	tbck (ENSSPAG00000001072) #30	ENSSPAG00000001003	npnta (ENSSPAG00000000947) #31	gstcd (ENSSPAG00000000887) #32	ints12 (ENSSPAG00000000842) #33	ARHGEF38 (ENSSPAG00000000823) #34	ppa2 (ENSSPAG00000000769) #35	TET2 (ENSSPAG00000000762) #36	CXXC4 (ENSSPAG00000000755) #37
Pomacentridae_A	ANCESTRAL SPECIES	50	ENSGT00390000017018.b	ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000160529	ENSGT00440000034932	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000158244 #30	ENSGT00940000161510	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a #37
Spiny chromis	MODERN SPECIES	511								bnc2 (ENSAPOG00000023782)	PSIP1 (ENSAPOG00000000671)	snapc3 (ENSAPOG00000023748)	TTC39B (ENSAPOG00000023719)	dnajb14 (ENSAPOG00000023678)	pla2g12a (ENSAPOG00000023664) #13	casp6a (ENSAPOG00000023641) #14	MCUB (ENSAPOG00000023598) #15	lef1 (ENSAPOG00000023579) #22
Amphiprion	ANCESTRAL SPECIES		ENSGT00390000011365.b	ENSGT00390000017018.b	ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00940000167108	ENSGT00940000160529	ENSGT00390000005844.a.b	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140 #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984 #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a.c #29	ENSGT00940000155191.a.b.e	ENSGT00940000158244 #30	ENSGT00940000155191.a.b.f	ENSGT00940000166257	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35
Orange clownfish	MODERN SPECIES	17	g3bp2a (ENSAPEG00000013191)	uso1 (ENSAPEG00000013266)	coro2aa (ENSAPEG00000013427)	anp32b (ENSAPEG00000013481)	trmo (ENSAPEG00000013504)	ENSAPEG00000013521	sh3gl2a (ENSAPEG00000013596)	bnc2 (ENSAPEG00000013800)	PSIP1 (ENSAPEG00000013846)	snapc3 (ENSAPEG00000013868)	TTC39B (ENSAPEG00000013901)	dnajb14 (ENSAPEG00000013959)	pla2g12a (ENSAPEG00000013988) #13	casp6a (ENSAPEG00000014029) #14	MCUB (ENSAPEG00000014066) #15	lef1 (ENSAPEG00000014112) #22	hadh (ENSAPEG00000014140) #23	cyp2u1 (ENSAPEG00000014152) #24	sgms2a (ENSAPEG00000014163) #25	papss1 (ENSAPEG00000014192) #26	dkk2 (ENSAPEG00000014294)	aimp1a (ENSAPEG00000014340) #29	ENSAPEG00000014357	tbck (ENSAPEG00000014390) #30	ENSAPEG00000014507	npnta (ENSAPEG00000014564) #31	gstcd (ENSAPEG00000014596) #32	ints12 (ENSAPEG00000014691) #33	ARHGEF38 (ENSAPEG00000014720) #34	ppa2 (ENSAPEG00000014741) #35	TET2 (ENSAPEG00000014776) #36
Clown anemonefish	MODERN SPECIES	2860																lef1 (ENSAOCG00000014547) #22
Protacanthopterygii	ANCESTRAL SPECIES	41	ENSGT00950000182907.a.b.b.a	ENSGT00390000004643	ENSGT00400000022377	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000154737.d	ENSGT00440000034932	ENSGT00390000005844.a.b.p	ENSGT00940000154706.rb.b	ENSGT00390000005708	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887	ENSGT00390000008798.c #13	ENSGT00940000155140.hb #14	ENSGT00940000158059.g #15	ENSGT00940000159660.j #22	ENSGT00940000159984.c #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244 #30	ENSGT00940000161510	ENSGT00940000156796.c.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a #35	ENSGT00940000160003 #36
Northern pike	MODERN SPECIES	24	coro2aa (ENSELUG00000015856)	anp32b (ENSELUG00000016016)	trmo (ENSELUG00000016067)	ENSELUG00000016113	ENSELUG00000025618	ENSELUG00000016205	ENSELUG00000000621	bnc2 (ENSELUG00000016430)	psip1a (ENSELUG00000016502)	snapc3 (ENSELUG00000016520)	TTC39B (ENSELUG00000016592)	dnajb14 (ENSELUG00000016613)	pla2g12a (ENSELUG00000027040) #13	casp6a (ENSELUG00000016648) #14	MCUB (ENSELUG00000016676) #15	lef1 (ENSELUG00000016722) #22	hadh (ENSELUG00000016785) #23	cyp2u1 (ENSELUG00000016801) #24	sgms2a (ENSELUG00000016817) #25	papss1 (ENSELUG00000016876) #26	dkk2 (ENSELUG00000016913)	aimp1a (ENSELUG00000016943) #29	tbck (ENSELUG00000017041) #30	ALOX15B (ENSELUG00000017066)	ALOX15B (ENSELUG00000028354)	ENSELUG00000029690	ENSELUG00000000638	npnta (ENSELUG00000017102) #31	gstcd (ENSELUG00000017124) #32	ints12 (ENSELUG00000017146) #33	ARHGEF38 (ENSELUG00000017188) #34
Salmoninae	ANCESTRAL SPECIES	112	ENSGT00950000182907.a.b.b.a.j.a.b	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000154737.d.o.a.a	ENSGT00440000034932.b	ENSGT00390000005844.a.b.p	ENSGT00940000154706.rb.b.a.a	ENSGT00390000005708.l	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887.q	ENSGT00390000008798.c.i #13	ENSGT00940000157887.r	ENSGT00390000008798.c.j.b.a #13	ENSGT00940000155140.hb #14	ENSGT00940000158059.g.a.a #15	ENSGT00940000159660.j #22	ENSGT00940000159660.i.b #22	ENSGT00940000159984.c #23	ENSGT00940000157714 #24	ENSGT00940000157370.b #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244.d #30	ENSGT00940000161510	ENSGT00940000156796.c.a.a.a	ENSGT00940000156796.c.a.a.b.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34
Huchen	DUPLICATION
Huchen	MODERN SPECIES	4593																lef1 (ENSHHUG00000042135) #22
Huchen	MODERN SPECIES	491	mknk2b (ENSHHUG00000048852)	mob3a (ENSHHUG00000048847)	zap70 (ENSHHUG00000048767)	ENSHHUG00000048762	adamts10 (ENSHHUG00000048726)	myo1f (ENSHHUG00000048611)	acer1 (ENSHHUG00000048604)	ENSHHUG00000048599	MLLT1 (ENSHHUG00000048596)	acsbg2 (ENSHHUG00000048549)	rfx2 (ENSHHUG00000048514)	FCHO1 (ENSHHUG00000048488)	ENSHHUG00000048479	ENSHHUG00000048443	trabd2b (ENSHHUG00000048439)	ENSHHUG00000048435 #22	ENSHHUG00000048430
Salmoninae_a	ANCESTRAL SPECIES	88	ENSGT00390000011365.b	ENSGT00390000017018.b.i	ENSGT00940000155598.a	ENSGT00950000182907.a.b.b.a.j.b	ENSGT00390000004643	ENSGT00950000182907.a.b.b.a.j.a.b.b	ENSGT00950000182907.a.b.b.a.j.a.a.b	ENSGT00390000005708.k	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887.q	ENSGT00390000008798.c.i #13	ENSGT00940000157887.r	ENSGT00390000008798.c.j.b.a #13	ENSGT00940000155140.hb #14	ENSGT00940000158059.g.a.a #15	ENSGT00940000159660.j #22	ENSGT00940000159984.c #23	ENSGT00940000157714.o #24	ENSGT00940000157370.b.d #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244.d #30	ENSGT00940000161510	ENSGT00940000156796.c.a.a.a.b	ENSGT00940000156796.c.a.a.b.b	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.z #35
Oncorhynchus	ANCESTRAL SPECIES	6	ENSGT00950000182907.a.b.b.a.j.a.a.a	ENSGT00950000182907.a.b.b.a.j.a.a.b	ENSGT00950000182907.a.b.b.a.j.b.d	ENSGT00940000167108	ENSGT00940000165650	ENSGT00940000154737.d.p.d	ENSGT00440000034932.a	ENSGT00390000005844.a.b.p	ENSGT00940000154706.rb.b.a.a	ENSGT00390000005708.l	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887.q	ENSGT00390000008798.c.i #13	ENSGT00940000155140.hb #14	ENSGT00940000158059.g.a.a #15	ENSGT00940000159660.j #22	ENSGT00940000159984.c #23	ENSGT00940000157714.o.c #24	ENSGT00940000157370.b.c #25	ENSGT00940000157714.p #24	ENSGT00940000157714.o.d #24	ENSGT00940000157370.b.d #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a.a.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244.d #30	ENSGT00940000161510	ENSGT00940000156796.c.a.a.a.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	10	ENSOMYG00000049881	chrna6 (ENSOMYG00000048287)	chrnb3a (ENSOMYG00000024186)	ENSOMYG00000069212	ENSOMYG00000060121	SCLT1 (ENSOMYG00000008889)	ENSOMYG00000008863	pcdh10a (ENSOMYG00000070001)	BNC2 (ENSOMYG00000068604)	PSIP1 (ENSOMYG00000073075)	SNAPC3 (ENSOMYG00000038458)	TTC39B (ENSOMYG00000038547)	ENSOMYG00000038236	pla2g12a (ENSOMYG00000038124) #14	ENSOMYG00000037905 #15	lef1 (ENSOMYG00000048732) #22	hadh (ENSOMYG00000037867) #23	cyp2u1 (ENSOMYG00000037825) #24	sgms2a (ENSOMYG00000037740) #25	papss1 (ENSOMYG00000034731) #26	dkk2 (ENSOMYG00000051355)	ENSOMYG00000048001	aimp1a (ENSOMYG00000034432) #29	tbck (ENSOMYG00000034169) #30	ENSOMYG00000033919	npnta (ENSOMYG00000076789) #31	gstcd (ENSOMYG00000033789) #32	ints12 (ENSOMYG00000033775) #33	ARHGEF38 (ENSOMYG00000033852) #34	ppa2 (ENSOMYG00000033655) #35	TET2 (ENSOMYG00000033566) #36
Rainbow trout	MODERN SPECIES	1	TRMO (ENSOMYG00000038683)	ENSOMYG00000050405	ENSOMYG00000060967	ENSOMYG00000055465	ENSOMYG00000062232	ENSOMYG00000009188	CNTLN (ENSOMYG00000009312)	bnc2 (ENSOMYG00000009358)	PSIP1 (ENSOMYG00000009399)	SNAPC3 (ENSOMYG00000038620)	TTC39B (ENSOMYG00000038393)	ENSOMYG00000074759	pla2g12a (ENSOMYG00000038502) #14	PLA2G12A (ENSOMYG00000037950) #13	ENSOMYG00000052925 #15	lef1 (ENSOMYG00000009410) #22	hadh (ENSOMYG00000056868) #23	cyp2u1 (ENSOMYG00000061438) #24	sgms2a (ENSOMYG00000037876) #25	papss1 (ENSOMYG00000037330) #26	dkk2 (ENSOMYG00000054653)	ENSOMYG00000072668	aimp1a (ENSOMYG00000009490) #29	tbck (ENSOMYG00000050930) #30	ENSOMYG00000009546	ENSOMYG00000034047	ENSOMYG00000039022	npnta (ENSOMYG00000066555) #31	ENSOMYG00000071531	gstcd (ENSOMYG00000051845) #32	ints12 (ENSOMYG00000051852) #33
Oncorhynchus_a	ANCESTRAL SPECIES	140							ENSGT00440000034932.b	ENSGT00390000005844.a.b.p	ENSGT00940000154706.rb.b.b	ENSGT00390000005708.l	ENSGT00950000182917.a.a.a.b	ENSGT00940000157887.q	ENSGT00390000008798.c.i #13	ENSGT00940000155140.hb #14	ENSGT00940000158059.g.a.a #15	ENSGT00940000159660.j #22	ENSGT00940000159984.c.c #23	ENSGT00940000157714.o.d #24	ENSGT00940000157370.b.d #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a.a.a	ENSGT00940000154950.y.a #29	ENSGT00940000158244.c #30	ENSGT00940000156796.c.a.a.a.a	ENSGT00930000150973.B.e.b #31	ENSGT00390000004446 #32	ENSGT00390000005218 #33	ENSGT00950000183088.a.b.b #34	ENSGT00390000017004.a.a.z #35	ENSGT00940000160003 #36	ENSGT00940000154108.b.a.a.d #37
Coho salmon	MODERN SPECIES	36				ENSOKIG00005027253	ENSOKIG00005027258	bnc2 (ENSOKIG00005027276)	ENSOKIG00005027318	PSIP1 (ENSOKIG00005027332)	snapc3 (ENSOKIG00005027368)	TTC39B (ENSOKIG00005027397)	dnajb14 (ENSOKIG00005027559)	PLA2G12A (ENSOKIG00005027649) #13	CASP6 (ENSOKIG00005027676) #14	ENSOKIG00005027696	MCUB (ENSOKIG00005027744) #15	lef1 (ENSOKIG00005027778) #22	hadh (ENSOKIG00005027860) #23	cyp2u1 (ENSOKIG00005027886) #24	sgms2a (ENSOKIG00005027899) #25	papss1 (ENSOKIG00005027949) #26	dkk2 (ENSOKIG00005028704)	aimp1a (ENSOKIG00005028713) #29	tbck (ENSOKIG00005028792) #30	ENSOKIG00005029033	ENSOKIG00005029187	npnta (ENSOKIG00005029265) #31	gstcd (ENSOKIG00005029422) #32	ints12 (ENSOKIG00005029672) #33	ARHGEF38 (ENSOKIG00005029680) #34	ppa2 (ENSOKIG00005029716) #35	TET2 (ENSOKIG00005030025) #36
Salmo	ANCESTRAL SPECIES	80	ENSGT00940000154737.d.o.a.a	ENSGT00440000034932.a	ENSGT00390000005844.a.b.o	ENSGT00940000154737.d.o.a.b	ENSGT00390000005844.a.b.p.c.b	ENSGT00940000154706.rb.b.a.b	ENSGT00390000005708.l	ENSGT00950000182917.a.a.a.b.d	ENSGT00940000157887.q	ENSGT00390000008798.c.i #13	ENSGT00390000008798.c.j.b.a #13	ENSGT00940000155140.hb.a #14	ENSGT01010000228071	ENSGT00940000155140.hb.b #14	ENSGT00940000158059.g.a.a #15	ENSGT00940000159660.j #22	ENSGT00940000159984.c.b #23	ENSGT00940000157714.o #24	ENSGT00940000157370.b.d #25	ENSGT00390000009613.b #26	ENSGT00940000164073.a.d	ENSGT00940000154950.y.a.i #29	ENSGT00940000158244.d.a #30	ENSGT00940000161510.kb	ENSGT00940000156796.c.a.a.a.b.a	ENSGT00930000150973.B.e.b.f #31	ENSGT00390000004446.f #32	ENSGT00390000005218.r #33	ENSGT00950000183088.a.b.b.h #34	ENSGT00390000017004.a.a.z #35	ENSGT00940000160003.q #36
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	27	ENSSSAG00000090165	ENSSSAG00000106210	ENSSSAG00000104844	ENSSSAG00000105824	ENSSSAG00000118103	ENSSSAG00000093857	ENSSSAG00000085567	bnc2 (ENSSSAG00000111717)	PSIP1 (ENSSSAG00000082787)	ENSSSAG00000107451	SNAPC3 (ENSSSAG00000046631)	TTC39B (ENSSSAG00000113881)	ENSSSAG00000046469	ENSSSAG00000102126 #14	ENSSSAG00000046560 #15	lef1 (ENSSSAG00000111072) #22	HADH (ENSSSAG00000049172) #23	cyp2u1 (ENSSSAG00000049238) #24	papss1 (ENSSSAG00000102084) #26	dkk2 (ENSSSAG00000090555)	aimp1 (ENSSSAG00000050766) #29	tbck (ENSSSAG00000050819) #30	loxe3 (ENSSSAG00000052761)	ENSSSAG00000092274	ENSSSAG00000004115	npnta (ENSSSAG00000084106) #31	gstcd (ENSSSAG00000052843) #32	ints12 (ENSSSAG00000052852) #33	ARHGEF38 (ENSSSAG00000115773) #34	IPYR2 (ENSSSAG00000053072) #35	TET2 (ENSSSAG00000053038) #36
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000002040	ENSSSAG00000100721	ENSSSAG00000043929	CNTLN (ENSSSAG00000108771)	ENSSSAG00000008604	bnc2 (ENSSSAG00000121119)	psip1 (ENSSSAG00000106074)	SNAPC3 (ENSSSAG00000044144)	TTC39B (ENSSSAG00000096745)	djb14 (ENSSSAG00000005051)	PG12A (ENSSSAG00000005035) #13	ENSSSAG00000104238	ENSSSAG00000083169	ENSSSAG00000110264 #14	MCUB (ENSSSAG00000049114) #15	lef1 (ENSSSAG00000087730) #22	hadh (ENSSSAG00000113995) #23	cyp2u1 (ENSSSAG00000004992) #24	sgms2a (ENSSSAG00000100072) #25	papss1 (ENSSSAG00000085906) #26	dkk2 (ENSSSAG00000050762)	aimp1a (ENSSSAG00000004110) #29	tbck (ENSSSAG00000053246) #30	ENSSSAG00000108717	ENSSSAG00000005119	ENSSSAG00000003986	ENSSSAG00000099226	ENSSSAG00000117225	ENSSSAG00000052827	ENSSSAG00000093609	npnta (ENSSSAG00000004121) #31
River trout	DUPLICATION
River trout	MODERN SPECIES	33	coro2aa (ENSSTUG00000003264)	trmo (ENSSTUG00000003220)	anp32b (ENSSTUG00000003117)	anp32b (ENSSTUG00000002994)	ENSSTUG00000002938	ENSSTUG00000002925	ENSSTUG00000002834	bnc2 (ENSSTUG00000002647)	PSIP1 (ENSSTUG00000002542)	snapc3 (ENSSTUG00000002519)	TTC39B (ENSSTUG00000002111)	DNAJB14 (ENSSTUG00000002053)	pla2g12a (ENSSTUG00000002043) #13	CASP6 (ENSSTUG00000002034) #14	MCUB (ENSSTUG00000002018) #15	lef1 (ENSSTUG00000001973) #22	hadh (ENSSTUG00000001923) #23	cyp2u1 (ENSSTUG00000001920) #24	sgms2a (ENSSTUG00000001916) #25	papss1 (ENSSTUG00000001733) #26	dkk2 (ENSSTUG00000001701)	aimp1a (ENSSTUG00000001679) #29	tbck (ENSSTUG00000001185) #30	ENSSTUG00000001071	ENSSTUG00000000992	npnta (ENSSTUG00000000934) #31	gstcd (ENSSTUG00000000924) #32	ints12 (ENSSTUG00000000919) #33	ARHGEF38 (ENSSTUG00000000914) #34	ppa2 (ENSSTUG00000000900) #35	TET2 (ENSSTUG00000000892) #36
River trout	MODERN SPECIES	536																lef1 (ENSSTUG00000035406) #22
Spotted gar	MODERN SPECIES	670	gstp1.2 (ENSLOCG00000012152)	fnta (ENSLOCG00000012159)	PIGG (ENSLOCG00000012169)	zgc:100846 (ENSLOCG00000012179)	ENSLOCG00000012188	lingo2b (ENSLOCG00000012193)	eif4ea (ENSLOCG00000012198) #17	metap1 (ENSLOCG00000012206)	adh5 (ENSLOCG00000012219)	ENSLOCG00000012228	dnajb14 (ENSLOCG00000012236)	CFI (ENSLOCG00000012242) #12	pla2g12a (ENSLOCG00000012254) #13	casp6a (ENSLOCG00000012266) #14	MCUB (ENSLOCG00000012272) #15	lef1 (ENSLOCG00000012276) #22	hadh (ENSLOCG00000012288) #23	cyp2u1 (ENSLOCG00000012294) #24	trmt10a (ENSLOCG00000012298)	mttp (ENSLOCG00000012306)	lgi2b (ENSLOCG00000012324)	ccdc149b (ENSLOCG00000012328)	sod3a (ENSLOCG00000018062)	dhx15 (ENSLOCG00000012339)	PPARGC1A (ENSLOCG00000012350)	gba3 (ENSLOCG00000012360)	ADGRA3 (ENSLOCG00000012367)	ENSLOCG00000012371	gabra4 (ENSLOCG00000012374)	ENSLOCG00000012380	ENSLOCG00000012384
Reedfish	MODERN SPECIES	15	anp32b (ENSECRG00000022685)	coro2aa (ENSECRG00000022694)	TBC1D2 (ENSECRG00000022714)	ENSECRG00000022727	ENSECRG00000022735	ENSECRG00000022747	ACTL7A (ENSECRG00000022756)	aptx (ENSECRG00000022766)	dnaja1 (ENSECRG00000022775)	smu1a (ENSECRG00000022785)	ADAMTSL1 (ENSECRG00000022799)	ENSECRG00000022812	abca1a (ENSECRG00000022826)	ostc (ENSECRG00000022834) #20	etnppl (ENSECRG00000022835) #19	lef1 (ENSECRG00000022837) #22	PIGG (ENSECRG00000022841)	zgc:100846 (ENSECRG00000022843)	ENSECRG00000022845	lingo2b (ENSECRG00000022846)	ENSECRG00000022847	b4galt1l (ENSECRG00000022848)	nipsnap3a (ENSECRG00000022851)	ENSECRG00000022853	exosc3 (ENSECRG00000022854)	b4galt1l (ENSECRG00000022855)	rest (ENSECRG00000022857)	noa1 (ENSECRG00000022859)	polr2b (ENSECRG00000022861)	ENSECRG00000022866	igfbp7 (ENSECRG00000022870)