Murinae	ANCESTRAL SPECIES	11	ENSGT00940000154654	ENSGT00390000014243 #7	ENSGT00940000156012.r #8	ENSGT01030000234558.C #9	ENSGT00390000014781 #10	ENSGT00390000014594 #11	ENSGT00940000159391 #12	ENSGT00940000154149.b.a #13	ENSGT00940000154499 #14	ENSGT00530000063646.a #15	ENSGT00390000001254 #16	ENSGT00940000155635 #17	ENSGT00940000154614 #18	ENSGT00530000063751.a #19	ENSGT00730000111014 #20	ENSGT00390000012568 #22	ENSGT00940000156236 #21	ENSGT00390000010743.a #23	ENSGT01030000234606.b #24	ENSGT00940000156099 #25	ENSGT00940000161034 #26	ENSGT00940000161004 #27	ENSGT00940000157316 #28	ENSGT00940000158520 #29	ENSGT00940000157937 #30	ENSGT00940000155195 #31	ENSGT00390000006200 #32	ENSGT00940000162420	ENSGT00940000164211 #33	ENSGT00940000155117.f.a #34	ENSGT00390000001114 #35
Mus	ANCESTRAL SPECIES	5	ENSGT00940000154654	ENSGT00390000014243 #7	ENSGT00940000156012.r #8	ENSGT01030000234558.C #9	ENSGT00390000014781 #10	ENSGT00390000014594 #11	ENSGT00940000159391 #12	ENSGT00940000154149.b.a #13	ENSGT00940000154499 #14	ENSGT00530000063646.a #15	ENSGT00390000001254 #16	ENSGT00940000155635 #17	ENSGT00940000154614 #18	ENSGT00530000063751.a #19	ENSGT00730000111014 #20	ENSGT00390000012568 #22	ENSGT00940000156236 #21	ENSGT00390000010743.a #23	ENSGT01030000234606.b #24	ENSGT00940000156099 #25	ENSGT00940000161034 #26	ENSGT00940000161004 #27	ENSGT00940000157316 #28	ENSGT00940000158520 #29	ENSGT00940000157937 #30	ENSGT00940000155195 #31	ENSGT00390000006200 #32	ENSGT00940000164211 #33	ENSGT00940000155117.f.a #34	ENSGT00390000001114 #35	ENSGT00940000158746 #36
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154654	ENSGT00390000014243 #7	ENSGT00940000156012.r #8	ENSGT01030000234558.C #9	ENSGT00390000014781 #10	ENSGT00390000014594 #11	ENSGT00940000159391 #12	ENSGT00940000154149.b.a #13	ENSGT00940000154499 #14	ENSGT00530000063646.a #15	ENSGT00390000001254 #16	ENSGT00940000155635 #17	ENSGT00940000154614 #18	ENSGT00530000063751.a #19	ENSGT00730000111014 #20	ENSGT00390000012568 #22	ENSGT00940000156236 #21	ENSGT00390000010743.a.h #23	ENSGT01030000234606.b #24	ENSGT00940000156099 #25	ENSGT00940000161034 #26	ENSGT00940000161004 #27	ENSGT00940000157316 #28	ENSGT00940000158520 #29	ENSGT00940000157937 #30	ENSGT00940000155195 #31	ENSGT00390000006200 #32	ENSGT00940000164211 #33	ENSGT00940000155117.f.a #34	ENSGT00390000001114 #35	ENSGT00940000158746 #36
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000154654	ENSGT00390000014243 #7	ENSGT00940000156012.r #8	ENSGT01030000234558.C #9	ENSGT00390000014781 #10	ENSGT00390000014594 #11	ENSGT00940000159391 #12	ENSGT00940000154149.b.a #13	ENSGT00940000154499 #14	ENSGT00530000063646.a #15	ENSGT00390000001254 #16	ENSGT00940000155635 #17	ENSGT00940000154614 #18	ENSGT00530000063751.a #19	ENSGT00730000111014 #20	ENSGT00390000012568 #22	ENSGT00940000156236 #21	ENSGT00390000010743.a.h #23	ENSGT01030000234606.b #24	ENSGT00940000156099 #25	ENSGT00940000161034 #26	ENSGT00940000161004 #27	ENSGT00940000157316 #28	ENSGT00940000158520 #29	ENSGT00940000157937 #30	ENSGT00940000155195 #31	ENSGT00390000006200 #32	ENSGT00940000164211 #33	ENSGT00940000155117.f.a #34	ENSGT00390000001114 #35	ENSGT00940000158746 #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000154654	ENSGT00390000014243 #7	ENSGT00940000156012.r #8	ENSGT01030000234558.C #9	ENSGT00390000014781 #10	ENSGT00390000014594 #11	ENSGT00940000159391 #12	ENSGT00940000154149.b.a #13	ENSGT00940000154499 #14	ENSGT00530000063646.a #15	ENSGT00390000001254 #16	ENSGT00940000155635 #17	ENSGT00940000154614 #18	ENSGT00530000063751.a #19	ENSGT00730000111014 #20	ENSGT00390000012568 #22	ENSGT00940000156236 #21	ENSGT00390000010743.a.h #23	ENSGT01030000234606.b #24	ENSGT00940000156099 #25	ENSGT00940000161034 #26	ENSGT00940000161004 #27	ENSGT00940000157316 #28	ENSGT00940000158520 #29	ENSGT00940000157937 #30	ENSGT00940000155195 #31	ENSGT00390000006200 #32	ENSGT00940000164211 #33	ENSGT00390000001114 #35	ENSGT00940000155117.f.a #34	ENSGT00940000164315.b.e.a ##37
spretus	MODERN SPECIES		Apobec4 (MGP_SPRETEiJ_G0015508) #7	Rgl1 (MGP_SPRETEiJ_G0015507) #8	Colgalt2 (MGP_SPRETEiJ_G0015506) #9	Tsen15 (MGP_SPRETEiJ_G0015505) #10	1700025G04Rik (MGP_SPRETEiJ_G0015504) #11	Edem3 (MGP_SPRETEiJ_G0015503) #12	Niban1 (MGP_SPRETEiJ_G0015502) #13	Rnf2 (MGP_SPRETEiJ_G0015501) #14	Trmt1l (MGP_SPRETEiJ_G0015500) #15	Swt1 (MGP_SPRETEiJ_G0015499) #16	Ivns1abp (MGP_SPRETEiJ_G0015498) #17	MGP_SPRETEiJ_G0015497 #18	MGP_SPRETEiJ_G0015496 #19	Tpr (MGP_SPRETEiJ_G0015495) #20	Pdc (MGP_SPRETEiJ_G0015494) #21	Odr4 (MGP_SPRETEiJ_G0015493) #22	Ptgs2 (MGP_SPRETEiJ_G0015492) #23	Pla2g4a (MGP_SPRETEiJ_G0015491) #24	Brinp3 (MGP_SPRETEiJ_G0015490) #25	Rgs18 (MGP_SPRETEiJ_G0015489) #26	Rgs21 (MGP_SPRETEiJ_G0015488) #27	Rgs1 (MGP_SPRETEiJ_G0015487) #28	Rgs13 (MGP_SPRETEiJ_G0015486) #29	Rgs2 (MGP_SPRETEiJ_G0015485) #30	Uchl5 (MGP_SPRETEiJ_G0015484) #31	Ro60 (MGP_SPRETEiJ_G0015483) #32	MGP_SPRETEiJ_G0015482 #33	B3galt2 (MGP_SPRETEiJ_G0015481) #34	Cdc73 (MGP_SPRETEiJ_G0015480) #35	Kcnt2 (MGP_SPRETEiJ_G0015479) #36	Cfh (MGP_SPRETEiJ_G0015478) #37
Steppe mouse	MODERN SPECIES	2127														ENSMSIG00000011488 #19	Tpr (ENSMSIG00000011409) #20	Odr4 (ENSMSIG00000011173) #22	Pdc (ENSMSIG00000011159) #21
Mouse	MODERN SPECIES		1700025G04Rik (ENSMUSG00000032666) #11	Edem3 (ENSMUSG00000043019) #12	Niban1 (ENSMUSG00000026483) #13	Rnf2 (ENSMUSG00000026484) #14	Trmt1l (ENSMUSG00000053286) #15	Swt1 (ENSMUSG00000052748) #16	Ivns1abp (ENSMUSG00000023150) #17	Gm47996 (ENSMUSG00000114591)	3110040M04Rik (ENSMUSG00000114582)	Gm47995 (ENSMUSG00000114694)	Gm8947 (ENSMUSG00000114943)	Gm47985 (ENSMUSG00000114212)	Hmcn1 (ENSMUSG00000066842) #18	Prg4 (ENSMUSG00000006014) #19	Tpr (ENSMUSG00000006005) #20	Odr4 (ENSMUSG00000006010) #22	Pdc (ENSMUSG00000006007) #21	Ptgs2 (ENSMUSG00000032487) #23	Pla2g4a (ENSMUSG00000056220) #24	Brinp3 (ENSMUSG00000035131) #25	Rgs18 (ENSMUSG00000026357) #26	Rgs21 (ENSMUSG00000098509) #27	Rgs1 (ENSMUSG00000026358) #28	Rgs13 (ENSMUSG00000051079) #29	Rgs2 (ENSMUSG00000026360) #30	Uchl5 (ENSMUSG00000018189) #31	Ro60 (ENSMUSG00000018199) #32	Glrx2 (ENSMUSG00000018196)	B3galt2 (ENSMUSG00000033849) #34	Cdc73 (ENSMUSG00000026361) #35	Kcnt2 (ENSMUSG00000052726) #36
Ryukyu mouse	MODERN SPECIES		Arpc5 (MGP_CAROLIEiJ_G0014702)	Apobec4 (MGP_CAROLIEiJ_G0014701) #7	Rgl1 (MGP_CAROLIEiJ_G0014700) #8	Colgalt2 (MGP_CAROLIEiJ_G0014699) #9	Tsen15 (MGP_CAROLIEiJ_G0014698) #10	1700025G04Rik (MGP_CAROLIEiJ_G0014697) #11	Edem3 (MGP_CAROLIEiJ_G0014696) #12	Niban1 (MGP_CAROLIEiJ_G0014695) #13	Rnf2 (MGP_CAROLIEiJ_G0014694) #14	Trmt1l (MGP_CAROLIEiJ_G0014693) #15	Swt1 (MGP_CAROLIEiJ_G0014692) #16	Ivns1abp (MGP_CAROLIEiJ_G0014691) #17	Hmcn1 (MGP_CAROLIEiJ_G0014690) #18	MGP_CAROLIEiJ_G0014689 #19	Tpr (MGP_CAROLIEiJ_G0014688) #20	Odr4 (MGP_CAROLIEiJ_G0014687) #22	Pdc (MGP_CAROLIEiJ_G0014686) #21	MGP_CAROLIEiJ_G0014685 ##23	Pla2g4a (MGP_CAROLIEiJ_G0014684) #24	Brinp3 (MGP_CAROLIEiJ_G0014683) #25	Rgs18 (MGP_CAROLIEiJ_G0014682) #26	Rgs21 (MGP_CAROLIEiJ_G0014681) #27	Rgs1 (MGP_CAROLIEiJ_G0014680) #28	Rgs13 (MGP_CAROLIEiJ_G0014679) #29	Rgs2 (MGP_CAROLIEiJ_G0014678) #30	Uchl5 (MGP_CAROLIEiJ_G0014677) #31	Ro60 (MGP_CAROLIEiJ_G0014676) #32	MGP_CAROLIEiJ_G0014675 #33	B3galt2 (MGP_CAROLIEiJ_G0014674) #34	Cdc73 (MGP_CAROLIEiJ_G0014673) #35	Kcnt2 (MGP_CAROLIEiJ_G0014672) #36
Shrew mouse	MODERN SPECIES	18	Arpc5 (MGP_PahariEiJ_G0027938)	Apobec4 (MGP_PahariEiJ_G0027937) #7	Rgl1 (MGP_PahariEiJ_G0027936) #8	Colgalt2 (MGP_PahariEiJ_G0027935) #9	Tsen15 (MGP_PahariEiJ_G0027934) #10	1700025G04Rik (MGP_PahariEiJ_G0027933) #11	Edem3 (MGP_PahariEiJ_G0027932) #12	Niban1 (MGP_PahariEiJ_G0027931) #13	Rnf2 (MGP_PahariEiJ_G0027930) #14	Trmt1l (MGP_PahariEiJ_G0027929) #15	Swt1 (MGP_PahariEiJ_G0027928) #16	Ivns1abp (MGP_PahariEiJ_G0027927) #17	Hmcn1 (MGP_PahariEiJ_G0027926) #18	Prg4 (MGP_PahariEiJ_G0027925) #19	Tpr (MGP_PahariEiJ_G0027924) #20	MGP_PahariEiJ_G0027923 #22	Pdc (MGP_PahariEiJ_G0027922) #21	Ptgs2 (MGP_PahariEiJ_G0027921) #23	Pla2g4a (MGP_PahariEiJ_G0027920) #24	Brinp3 (MGP_PahariEiJ_G0027919) #25	Rgs18 (MGP_PahariEiJ_G0027918) #26	Rgs21 (MGP_PahariEiJ_G0027917) #27	Rgs1 (MGP_PahariEiJ_G0027916) #28	Rgs13 (MGP_PahariEiJ_G0027915) #29	Rgs2 (MGP_PahariEiJ_G0027914) #30	MGP_PahariEiJ_G0027913 #31	Ro60 (MGP_PahariEiJ_G0027912) #32	Glrx2 (MGP_PahariEiJ_G0027911)	B3galt2 (MGP_PahariEiJ_G0027910) #34	Cdc73 (MGP_PahariEiJ_G0027909) #35	Kcnt2 (MGP_PahariEiJ_G0027908) #36
Rat	MODERN SPECIES	4	Rgl1 (ENSRNOG00000002347) #8	Colgalt2 (ENSRNOG00000028207) #9	Tsen15 (ENSRNOG00000002352) #10	RGD1309104 (ENSRNOG00000028236)	AABR07021384.1 (ENSRNOG00000029859)	Edem3 (ENSRNOG00000028358) #12	Niban1 (ENSRNOG00000002403) #13	ENSRNOG00000064602	Rnf2 (ENSRNOG00000002454) #14	Trmt1l (ENSRNOG00000002580) #15	Swt1 (ENSRNOG00000032258) #16	Ivns1abp (ENSRNOG00000002618) #17	Hmcn1 (ENSRNOG00000028627) #18	Prg4 (ENSRNOG00000002385) #19	Tpr (ENSRNOG00000002394) #20	Odr4 (ENSRNOG00000002473) #22	Pdc (ENSRNOG00000002517) #21	Ptgs2 (ENSRNOG00000002525) #23	ENSRNOG00000066166	Pla2g4a (ENSRNOG00000002657) #24	Gapdh-ps17 (ENSRNOG00000022174)	Brinp3 (ENSRNOG00000002811) #25	Rgs18 (ENSRNOG00000003959) #26	ENSRNOG00000065694	Rgs21 (ENSRNOG00000056369) #27	Rgs1 (ENSRNOG00000003895) #28	Rgs13 (ENSRNOG00000003888) #29	Rgs2 (ENSRNOG00000003687) #30	ENSRNOG00000070924	Uchl5 (ENSRNOG00000003545) #31	Ro60 (ENSRNOG00000003434) #32