Murinae	ANCESTRAL SPECIES	4	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #19	ENSGT00940000155993.c #20	ENSGT00950000183006.A.b #21	ENSGT00950000183006.B.f.b.a #22	ENSGT00940000158022 #23	ENSGT00950000183119.a.e.b #24	ENSGT00390000000873.a.b #25	ENSGT00940000159231 #27	ENSGT00880000138051.a	ENSGT00940000158567 #28	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Mus	ANCESTRAL SPECIES	20	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #19	ENSGT00940000155993.c #20	ENSGT00950000183006.A.b #21	ENSGT00950000183006.B.f.b.a #22	ENSGT00940000158022 #23	ENSGT00950000183119.a.e.b #24	ENSGT00390000000873.a.b #25	ENSGT00940000159231 #27	ENSGT00880000138051.a	ENSGT00940000158567 #28	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #19	ENSGT00940000155993.c #20	ENSGT00950000183006.A.b #21	ENSGT00950000183006.B.f.b.a #22	ENSGT00940000158022 #23	ENSGT00950000183119.a.e.b #24	ENSGT00390000000873.a.b #25	ENSGT00940000159231 #27	ENSGT00880000138051.a	ENSGT00940000158567 #28	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #19	ENSGT00940000155993.c #20	ENSGT00950000183006.A.b #21	ENSGT00950000183006.B.f.b.a #22	ENSGT00940000158022 #23	ENSGT00950000183119.a.e.b #24	ENSGT00390000000873.a.b #25	ENSGT00940000159231 #27	ENSGT00880000138051.a	ENSGT00940000158567 #28	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Mus_C	ANCESTRAL SPECIES	19	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #19	ENSGT00940000155993.c #20	ENSGT00950000183006.A.b #21	ENSGT00950000183006.B.f.b.a #22	ENSGT00940000158022 #23	ENSGT00950000183119.a.e.b #24	ENSGT00390000000873.a.b #25	ENSGT00940000159231 #27	ENSGT00880000138051.a	ENSGT00940000158567 #28	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Steppe mouse	MODERN SPECIES	3058											ENSMSIG00000019921 #17	ENSMSIG00000019922 #18	Tfec (ENSMSIG00000019924) #19	Tes (ENSMSIG00000019933) #20	Cav2 (ENSMSIG00000019974) #21	Cav1 (ENSMSIG00000019988) #22	Met (ENSMSIG00000020011) #23	Capza2 (ENSMSIG00000020054) #24	ENSMSIG00000020093 #25	ENSMSIG00000020188 #26	ENSMSIG00000020205 #27	Cftr (ENSMSIG00000020275) #28
spretus	MODERN SPECIES	15	Ndufa4 (MGP_SPRETEiJ_G0029102)	MGP_SPRETEiJ_G0029103	Thsd7a (MGP_SPRETEiJ_G0029104)	Tmem106b (MGP_SPRETEiJ_G0029105)	Vwde (MGP_SPRETEiJ_G0029106)	Tmem168 (MGP_SPRETEiJ_G0029107)	Bmt2 (MGP_SPRETEiJ_G0029108)	Gpr85 (MGP_SPRETEiJ_G0029109)	Smim30 (MGP_SPRETEiJ_G0029110)	Ppp1r3a (MGP_SPRETEiJ_G0029111)	Foxp2 (MGP_SPRETEiJ_G0029112)	MGP_SPRETEiJ_G0029113	Tfec (MGP_SPRETEiJ_G0029114) #19	Tes (MGP_SPRETEiJ_G0029115) #20	Cav2 (MGP_SPRETEiJ_G0029116) #21	Cav1 (MGP_SPRETEiJ_G0029117) #22	Met (MGP_SPRETEiJ_G0029118) #23	Capza2 (MGP_SPRETEiJ_G0029119) #24	St7 (MGP_SPRETEiJ_G0029120) #25	Wnt2 (MGP_SPRETEiJ_G0029121) #27	Asz1 (MGP_SPRETEiJ_G0029122)	Cftr (MGP_SPRETEiJ_G0029123) #28	Cttnbp2 (MGP_SPRETEiJ_G0029124)	Lsm8 (MGP_SPRETEiJ_G0029125)	Ankrd7 (MGP_SPRETEiJ_G0029126)	Kcnd2 (MGP_SPRETEiJ_G0029127)	Tspan12 (MGP_SPRETEiJ_G0029128)	Ing3 (MGP_SPRETEiJ_G0029129)	Cped1 (MGP_SPRETEiJ_G0029130)	Wnt16 (MGP_SPRETEiJ_G0029131)	Fam3c (MGP_SPRETEiJ_G0029132)
Mouse	MODERN SPECIES	15	Ndufa4 (ENSMUSG00000029632)	Phf14 (ENSMUSG00000029629)	Thsd7a (ENSMUSG00000032625)	Tmem106b (ENSMUSG00000029571)	Vwde (ENSMUSG00000079679)	Tmem168 (ENSMUSG00000029569)	Bmt2 (ENSMUSG00000042742)	Gpr85 (ENSMUSG00000048216)	Smim30 (ENSMUSG00000052419)	Ppp1r3a (ENSMUSG00000042717)	Foxp2 (ENSMUSG00000029563)	Mdfic (ENSMUSG00000041390)	Tfec (ENSMUSG00000029553) #19	Tes (ENSMUSG00000029552) #20	Cav2 (ENSMUSG00000000058) #21	Cav1 (ENSMUSG00000007655) #22	Met (ENSMUSG00000009376) #23	Capza2 (ENSMUSG00000015733) #24	St7 (ENSMUSG00000029534) #25	Wnt2 (ENSMUSG00000010797) #27	Asz1 (ENSMUSG00000010796)	Cftr (ENSMUSG00000041301) #28	Cttnbp2 (ENSMUSG00000000416)	Lsm8 (ENSMUSG00000044155)	Ankrd7 (ENSMUSG00000029517)	Kcnd2 (ENSMUSG00000060882)	Tspan12 (ENSMUSG00000029669)	Ing3 (ENSMUSG00000029670)	Cped1 (ENSMUSG00000062980)	Wnt16 (ENSMUSG00000029671)	Fam3c (ENSMUSG00000029672)
Ryukyu mouse	MODERN SPECIES	15	Ndufa4 (MGP_CAROLIEiJ_G0028102)	MGP_CAROLIEiJ_G0028103	MGP_CAROLIEiJ_G0028104	Tmem106b (MGP_CAROLIEiJ_G0028105)	Vwde (MGP_CAROLIEiJ_G0028106)	MGP_CAROLIEiJ_G0028107	Bmt2 (MGP_CAROLIEiJ_G0028108)	Gpr85 (MGP_CAROLIEiJ_G0028109)	Smim30 (MGP_CAROLIEiJ_G0028110)	Ppp1r3a (MGP_CAROLIEiJ_G0028111)	Foxp2 (MGP_CAROLIEiJ_G0028112)	MGP_CAROLIEiJ_G0028113	Tfec (MGP_CAROLIEiJ_G0028114) #19	Tes (MGP_CAROLIEiJ_G0028115) #20	Cav2 (MGP_CAROLIEiJ_G0028116) #21	Cav1 (MGP_CAROLIEiJ_G0028117) #22	Met (MGP_CAROLIEiJ_G0028118) #23	Capza2 (MGP_CAROLIEiJ_G0028119) #24	St7 (MGP_CAROLIEiJ_G0028120) #25	Wnt2 (MGP_CAROLIEiJ_G0028121) #27	Asz1 (MGP_CAROLIEiJ_G0028122)	Cftr (MGP_CAROLIEiJ_G0028123) #28	Cttnbp2 (MGP_CAROLIEiJ_G0028124)	Lsm8 (MGP_CAROLIEiJ_G0028125)	Ankrd7 (MGP_CAROLIEiJ_G0028126)	Kcnd2 (MGP_CAROLIEiJ_G0028127)	Tspan12 (MGP_CAROLIEiJ_G0028128)	Ing3 (MGP_CAROLIEiJ_G0028129)	Cped1 (MGP_CAROLIEiJ_G0028130)	Wnt16 (MGP_CAROLIEiJ_G0028131)	Fam3c (MGP_CAROLIEiJ_G0028132)
Shrew mouse	MODERN SPECIES	11	Ndufa4 (MGP_PahariEiJ_G0021858)	MGP_PahariEiJ_G0021859	Thsd7a (MGP_PahariEiJ_G0021860)	Tmem106b (MGP_PahariEiJ_G0021861)	Vwde (MGP_PahariEiJ_G0021862)	MGP_PahariEiJ_G0021863	Bmt2 (MGP_PahariEiJ_G0021864)	Gpr85 (MGP_PahariEiJ_G0021865)	Smim30 (MGP_PahariEiJ_G0021866)	Ppp1r3a (MGP_PahariEiJ_G0021867)	Foxp2 (MGP_PahariEiJ_G0021868)	MGP_PahariEiJ_G0021869	Tfec (MGP_PahariEiJ_G0021870) #19	Tes (MGP_PahariEiJ_G0021871) #20	Cav2 (MGP_PahariEiJ_G0021872) #21	Cav1 (MGP_PahariEiJ_G0021873) #22	Met (MGP_PahariEiJ_G0021874) #23	Capza2 (MGP_PahariEiJ_G0021875) #24	St7 (MGP_PahariEiJ_G0021876) #25	Wnt2 (MGP_PahariEiJ_G0021877) #27	Asz1 (MGP_PahariEiJ_G0021878)	Cftr (MGP_PahariEiJ_G0021879) #28	Cttnbp2 (MGP_PahariEiJ_G0021880)	MGP_PahariEiJ_G0021881	Ankrd7 (MGP_PahariEiJ_G0021882)	Kcnd2 (MGP_PahariEiJ_G0021883)	Tspan12 (MGP_PahariEiJ_G0021884)	Ing3 (MGP_PahariEiJ_G0021885)	Cped1 (MGP_PahariEiJ_G0021886)	Wnt16 (MGP_PahariEiJ_G0021887)	Fam3c (MGP_PahariEiJ_G0021888)
Rat	MODERN SPECIES	14	Tas2r7l (ENSRNOG00000024685)	ENSRNOG00000064825	LOC100911252 (ENSRNOG00000062896)	Tmem168 (ENSRNOG00000057290)	Bmt2 (ENSRNOG00000007224)	ENSRNOG00000031207	Gpr85 (ENSRNOG00000024636)	Ppp1r3a (ENSRNOG00000059350)	Foxp2 (ENSRNOG00000054508)	Rbmxl1b (ENSRNOG00000059347)	Mdfic (ENSRNOG00000053787)	RGD1562178 (ENSRNOG00000052702)	Tfec (ENSRNOG00000061595) #19	Tes (ENSRNOG00000051952) #20	Cav2 (ENSRNOG00000057713) #21	Cav1 (ENSRNOG00000056836) #22	Met (ENSRNOG00000052745) #23	Capza2 (ENSRNOG00000056207) #24	ST7 (ENSRNOG00000056243) #25	AC123138.1 (ENSRNOG00000012822)	Wnt2 (ENSRNOG00000051905) #27	Asz1 (ENSRNOG00000060343)	ENSRNOG00000067965 #26	Cftr (ENSRNOG00000055103) #28	Cttnbp2 (ENSRNOG00000061845)	Lsm8 (ENSRNOG00000070946)	Ankrd7 (ENSRNOG00000055481)	LOC685171 (ENSRNOG00000058543)	Kcnd2 (ENSRNOG00000067416)	Tspan12 (ENSRNOG00000059016)	ENSRNOG00000064820