Mus	ANCESTRAL SPECIES	2	ENSGT00390000008812.b.b #8	ENSGT00940000157411 #9	ENSGT00390000012062 #10	ENSGT00940000161810 #11	ENSGT00940000154991.b #12	ENSGT00900000143320	ENSGT01100000263482.A.a.a.d.a.a.a.b #13	ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14	ENSGT01100000263482.A.a.a.c.b #15	ENSGT01100000263482.A.a.a.d.a.a.a.a.a #16	ENSGT01100000263482.A.a.a.c.a #17	ENSGT01030000234760 #18	ENSGT00940000158479 #19	ENSGT00940000156339 #20	ENSGT00390000012151 #21	ENSGT00940000156492 #22	ENSGT00390000012719.a #23	ENSGT00940000159095 #24	ENSGT00390000006458 #25	ENSGT00940000157881 #26	ENSGT00940000157654 #27	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #28	ENSGT00410000025651.A.b.a.a.a.a #30	ENSGT00410000025651.A.b.a.a.b.e.a #31	ENSGT00410000025651.A.b.a.a.b.f #32	ENSGT00410000025651.A.b.a.a.b.e.b #34	ENSGT00410000025651.A.b.b #35	ENSGT00390000016209 #36	ENSGT00940000155206.d #37	ENSGT00940000160764
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000008812.b.b #8	ENSGT00940000157411 #9	ENSGT00390000012062 #10	ENSGT00940000161810 #11	ENSGT00940000154991.b #12	ENSGT00900000143320	ENSGT01100000263482.A.a.a.d.a.a.a.b #13	ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14	ENSGT01100000263482.A.a.a.c.b #15	ENSGT01100000263482.A.a.a.d.a.a.a.a.a #16	ENSGT01100000263482.A.a.a.c.a #17	ENSGT01030000234760 #18	ENSGT00940000158479 #19	ENSGT00940000156339 #20	ENSGT00390000012151 #21	ENSGT00940000156492 #22	ENSGT00390000012719.a #23	ENSGT00940000159095 #24	ENSGT00390000006458 #25	ENSGT00940000157881 #26	ENSGT00940000157654 #27	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #28	ENSGT00410000025651.A.b.a.a.a.a #30	ENSGT00410000025651.A.b.a.a.b.e.a #31	ENSGT00410000025651.A.b.a.a.b.f #32	ENSGT00410000025651.A.b.a.a.b.e.b.a #34	ENSGT00410000025651.A.b.b #35	ENSGT00390000016209 #36	ENSGT00940000155206.d #37	ENSGT00940000160764
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000008812.b.b #8	ENSGT00940000157411 #9	ENSGT00390000012062 #10	ENSGT00940000161810 #11	ENSGT00940000154991.b #12	ENSGT00900000143320	ENSGT01100000263482.A.a.a.d.a.a.a.b #13	ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14	ENSGT01100000263482.A.a.a.c.b #15	ENSGT01100000263482.A.a.a.d.a.a.a.a.a #16	ENSGT01100000263482.A.a.a.c.a #17	ENSGT01030000234760 #18	ENSGT00940000158479 #19	ENSGT00940000156339 #20	ENSGT00390000012151 #21	ENSGT00940000156492 #22	ENSGT00390000012719.a #23	ENSGT00940000159095 #24	ENSGT00390000006458 #25	ENSGT00940000157881 #26	ENSGT00940000157654 #27	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #28	ENSGT00410000025651.A.b.a.a.a.a #30	ENSGT00410000025651.A.b.a.a.b.e.a #31	ENSGT00410000025651.A.b.a.a.b.f #32	ENSGT00410000025651.A.b.a.a.b.e.b.b #33	ENSGT00410000025651.A.b.a.a.b.e.b.a #34	ENSGT00410000025651.A.b.b #35	ENSGT00390000016209 #36	ENSGT00940000155206.d #37
Mouse	MODERN SPECIES	2	Psmd11 (ENSMUSG00000017428) #7	Cdk5r1 (ENSMUSG00000048895) #8	Myo1d (ENSMUSG00000035441) #9	Tmem98 (ENSMUSG00000035413) #10	Spaca3 (ENSMUSG00000053184) #11	Asic2 (ENSMUSG00000020704) #12	Ccl2 (ENSMUSG00000035385) #13	Ccl7 (ENSMUSG00000035373) #14	Ccl11 (ENSMUSG00000020676) #15	Ccl12 (ENSMUSG00000035352) #16	Ccl8 (ENSMUSG00000009185) #17	Ccl1 (ENSMUSG00000020702) #18	Tmem132e (ENSMUSG00000020701) #19	Cct6b (ENSMUSG00000020698) #20	Zfp830 (ENSMUSG00000046010) #21	Lig3 (ENSMUSG00000020697) #22	Rffl (ENSMUSG00000020696) #23	Rad51d (ENSMUSG00000018841) #24	Fndc8 (ENSMUSG00000018844) #25	Nle1 (ENSMUSG00000020692) #26	Unc45b (ENSMUSG00000018845) #27	Slfn5 (ENSMUSG00000054404) #28	Slfn9 (ENSMUSG00000069793) #29	Slfn8 (ENSMUSG00000035208) #30	Slfn2 (ENSMUSG00000072620) #31	Slfn1 (ENSMUSG00000078763) #32	Slfn4 (ENSMUSG00000000204) #33	Slfn3 (ENSMUSG00000018986) #34	Slfn14 (ENSMUSG00000082101) #35	Pex12 (ENSMUSG00000018733) #36	Ap2b1 (ENSMUSG00000035152) #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000008812.b.b #8	ENSGT00940000157411 #9	ENSGT00390000012062 #10	ENSGT00940000161810 #11	ENSGT00940000154991.b #12	ENSGT00900000143320	ENSGT01100000263482.A.a.a.d.a.a.a.b #13	ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14	ENSGT01100000263482.A.a.a.c.b #15	ENSGT01100000263482.A.a.a.d.a.a.a.a.a #16	ENSGT01100000263482.A.a.a.c.a #17	ENSGT01030000234760 #18	ENSGT00940000158479 #19	ENSGT00940000156339 #20	ENSGT00390000012151 #21	ENSGT00940000156492 #22	ENSGT00390000012719.a #23	ENSGT00940000159095 #24	ENSGT00390000006458 #25	ENSGT00940000157881 #26	ENSGT00940000157654 #27	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #28	ENSGT00410000025651.A.b.a.a.a.a #30	ENSGT00410000025651.A.b.a.a.b.e.a #31	ENSGT00410000025651.A.b.a.a.b.f #32	ENSGT00410000025651.A.b.a.a.b.e.b.a #34	ENSGT00410000025651.A.b.b #35	ENSGT00390000016209 #36	ENSGT00940000155206.d #37	ENSGT00940000160764
spretus	MODERN SPECIES	2	Myo1d (MGP_SPRETEiJ_G0017685) #9	Tmem98 (MGP_SPRETEiJ_G0017686) #10	Spaca3 (MGP_SPRETEiJ_G0017687) #11	Asic2 (MGP_SPRETEiJ_G0017688) #12	MGP_SPRETEiJ_G0017689	MGP_SPRETEiJ_G0017690	Ccl2 (MGP_SPRETEiJ_G0017691) #13	Ccl7 (MGP_SPRETEiJ_G0017692) #14	Ccl11 (MGP_SPRETEiJ_G0017693) #15	Ccl12 (MGP_SPRETEiJ_G0017694) #16	Ccl8 (MGP_SPRETEiJ_G0017695) #17	Ccl1 (MGP_SPRETEiJ_G0017696) #18	Tmem132e (MGP_SPRETEiJ_G0017697) #19	Cct6b (MGP_SPRETEiJ_G0017698) #20	Zfp830 (MGP_SPRETEiJ_G0017699) #21	Lig3 (MGP_SPRETEiJ_G0017700) #22	Rffl (MGP_SPRETEiJ_G0017701) #23	Rad51d (MGP_SPRETEiJ_G0017702) #24	Fndc8 (MGP_SPRETEiJ_G0017703) #25	Nle1 (MGP_SPRETEiJ_G0017704) #26	Unc45b (MGP_SPRETEiJ_G0017705) #27	Slfn5 (MGP_SPRETEiJ_G0017706) #28	MGP_SPRETEiJ_G0017707 #30	MGP_SPRETEiJ_G0017708 #30	Slfn2 (MGP_SPRETEiJ_G0017709) #31	Slfn1 (MGP_SPRETEiJ_G0017710) #32	MGP_SPRETEiJ_G0017711 #34	MGP_SPRETEiJ_G0017712 #34	Slfn14 (MGP_SPRETEiJ_G0017713) #35	Pex12 (MGP_SPRETEiJ_G0017714) #36	Ap2b1 (MGP_SPRETEiJ_G0017715) #37
Steppe mouse	MODERN SPECIES	3351	Tmem98 (ENSMSIG00000007161) #10	Spaca3 (ENSMSIG00000007147) #11	ENSMSIG00000007120	Asic2 (ENSMSIG00000007029) #12	Ccl2 (ENSMSIG00000007015) #13	ENSMSIG00000006998	Ccl7 (ENSMSIG00000006992) #14	Ccl11 (ENSMSIG00000006983) #15	Ccl12 (ENSMSIG00000006962) #16	Ccl8 (ENSMSIG00000006943) #17	Ccl1 (ENSMSIG00000006904) #18	Tmem132e (ENSMSIG00000006801) #19	ENSMSIG00000006783	Cct6b (ENSMSIG00000006565) #20	Zfp830 (ENSMSIG00000006544) #21	Lig3 (ENSMSIG00000006247) #22	ENSMSIG00000006067 #23	Rad51d (ENSMSIG00000005840) #24	Fndc8 (ENSMSIG00000005819) #25	Nle1 (ENSMSIG00000005791) #26	Unc45b (ENSMSIG00000005522) #27	ENSMSIG00000005499	Slfn5 (ENSMSIG00000005472) #28
Ryukyu mouse	MODERN SPECIES	2	Myo1d (MGP_CAROLIEiJ_G0016841) #9	Tmem98 (MGP_CAROLIEiJ_G0016842) #10	Spaca3 (MGP_CAROLIEiJ_G0016843) #11	Asic2 (MGP_CAROLIEiJ_G0016844) #12	MGP_CAROLIEiJ_G0016845	MGP_CAROLIEiJ_G0016846	Ccl2 (MGP_CAROLIEiJ_G0016847) #13	Ccl7 (MGP_CAROLIEiJ_G0016848) #14	Ccl11 (MGP_CAROLIEiJ_G0016849) #15	Ccl12 (MGP_CAROLIEiJ_G0016850) #16	Ccl8 (MGP_CAROLIEiJ_G0016851) #17	Ccl1 (MGP_CAROLIEiJ_G0016852) #18	Tmem132e (MGP_CAROLIEiJ_G0016853) #19	Cct6b (MGP_CAROLIEiJ_G0016854) #20	Zfp830 (MGP_CAROLIEiJ_G0016855) #21	Lig3 (MGP_CAROLIEiJ_G0016856) #22	Rffl (MGP_CAROLIEiJ_G0016857) #23	Rad51d (MGP_CAROLIEiJ_G0016858) #24	Fndc8 (MGP_CAROLIEiJ_G0016859) #25	Nle1 (MGP_CAROLIEiJ_G0016860) #26	Unc45b (MGP_CAROLIEiJ_G0016861) #27	MGP_CAROLIEiJ_G0016862 #28	MGP_CAROLIEiJ_G0016863 #30	MGP_CAROLIEiJ_G0016864 #30	Slfn2 (MGP_CAROLIEiJ_G0016865) #31	Slfn1 (MGP_CAROLIEiJ_G0016866) #32	MGP_CAROLIEiJ_G0016867 #34	MGP_CAROLIEiJ_G0016868 #34	Slfn14 (MGP_CAROLIEiJ_G0016869) #35	Pex12 (MGP_CAROLIEiJ_G0016870) #36	Ap2b1 (MGP_CAROLIEiJ_G0016871) #37
Shrew mouse	MODERN SPECIES	5	Myo1d (MGP_PahariEiJ_G0017978) #9	Tmem98 (MGP_PahariEiJ_G0017979) #10	Spaca3 (MGP_PahariEiJ_G0017980) #11	Asic2 (MGP_PahariEiJ_G0017981) #12	MGP_PahariEiJ_G0017982	MGP_PahariEiJ_G0017983	Ccl2 (MGP_PahariEiJ_G0017984) #13	Ccl7 (MGP_PahariEiJ_G0017985) #14	Ccl11 (MGP_PahariEiJ_G0017986) #15	MGP_PahariEiJ_G0017987 #16	MGP_PahariEiJ_G0017988 #17	Ccl1 (MGP_PahariEiJ_G0017989) #18	Tmem132e (MGP_PahariEiJ_G0017990) #19	Cct6b (MGP_PahariEiJ_G0017991) #20	Zfp830 (MGP_PahariEiJ_G0017992) #21	Lig3 (MGP_PahariEiJ_G0017993) #22	Rffl (MGP_PahariEiJ_G0017994) #23	Rad51d (MGP_PahariEiJ_G0017995) #24	Fndc8 (MGP_PahariEiJ_G0017996) #25	Nle1 (MGP_PahariEiJ_G0017997) #26	Unc45b (MGP_PahariEiJ_G0017998) #27	Slfn5 (MGP_PahariEiJ_G0017999) #28	Slfn14 (MGP_PahariEiJ_G0018000) #35	Pex12 (MGP_PahariEiJ_G0018001) #36	Ap2b1 (MGP_PahariEiJ_G0018002) #37	Rasl10b (MGP_PahariEiJ_G0018003)	Gas2l2 (MGP_PahariEiJ_G0018004)	1700020L24Rik (MGP_PahariEiJ_G0018005)	Mmp28 (MGP_PahariEiJ_G0018006)	Taf15 (MGP_PahariEiJ_G0018007)	Heatr9 (MGP_PahariEiJ_G0018008)