Chordata ANCESTRAL SPECIES ENSGT00940000156492 #22 Vertebrata ANCESTRAL SPECIES 455 ENSGT00940000155974 ENSGT00940000156492 #22 Gnathostomata ANCESTRAL SPECIES 119 ENSGT00940000154762 ENSGT00940000164025 ENSGT00530000063975 ENSGT00940000156345 ENSGT00940000157152.C ENSGT00950000183012.B.a ENSGT00510000048685 ENSGT00390000002172.A.a ENSGT00510000047471 ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000153594.d ENSGT00940000153253.b.a ENSGT00940000155974 ENSGT00940000156492 #22 ENSGT00940000159095 #24 Euteleostomi ANCESTRAL SPECIES 798 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 Sarcopterygii ANCESTRAL SPECIES 142 ENSGT00940000162095 ENSGT00940000165067 ENSGT00390000015880 ENSGT00940000159210 ENSGT00390000013836 ENSGT00390000002172.A.a ENSGT00510000047471 ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 Tetrapoda ANCESTRAL SPECIES 82 ENSGT00390000014737 ENSGT00510000048685 ENSGT00950000183012.B.a ENSGT00940000159210 ENSGT00390000013836 ENSGT00390000002172.A.a ENSGT00510000047471 ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A #29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00940000165977 ENSGT01070000257310 ENSGT00940000156847 ENSGT00390000007848.a Amniota ANCESTRAL SPECIES 18 ENSGT00510000048685 ENSGT00950000183012.B.a ENSGT00940000159210 ENSGT00390000013836 ENSGT00390000002172.A.a ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##13 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.a ##29 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 Mammalia ANCESTRAL SPECIES 37 ENSGT01100000263482.C.c.b.b ##13 ENSGT01100000263482.B ##13 ENSGT01100000263482.D ##13 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 Theria ANCESTRAL SPECIES 25 ENSGT00940000155641 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a #13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Eutheria ANCESTRAL SPECIES 4 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Boreoeutheria ANCESTRAL SPECIES 4 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT01060000250264 ENSGT00940000154849.a Primates ANCESTRAL SPECIES 3 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Haplorrhini ANCESTRAL SPECIES 6 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Simiiformes ANCESTRAL SPECIES 7 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Catarrhini ANCESTRAL SPECIES 8 ENSGT00740000117022 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458.b ##25 ENSGT00390000006458.a.a #26 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00940000153342.b.x #32 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00390000010799.u.b.a.a.b.p.b #36 Cercopithecinae_b ANCESTRAL SPECIES 33 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458.b ##25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a.cb ##29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a.bb.b #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00940000153342.b.x #32 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00390000010799.u.b.a.a.b.p.b #36 Cercopithecinae_d ANCESTRAL SPECIES 98 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458.b ##25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a.bb.b #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00940000153342.b.x #32 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00390000010799.u.b.a.a.b.p.b #36 ENSGT00940000160764 Sooty mangabey MODERN SPECIES 145 PSMD11 (ENSCATG00000043638) #7 CDK5R1 (ENSCATG00000019620) #8 MYO1D (ENSCATG00000040334) #9 TMEM98 (ENSCATG00000039721) #10 SPACA3 (ENSCATG00000029915) #11 ASIC2 (ENSCATG00000035584) #12 CCL2 (ENSCATG00000043802) #13 CCL7 (ENSCATG00000038886) #14 CCL11 (ENSCATG00000037948) #15 CCL8 (ENSCATG00000039815) #16 CCL13 (ENSCATG00000037447) #17 CCL1 (ENSCATG00000043758) #18 TMEM132E (ENSCATG00000035833) #19 ZNF830 (ENSCATG00000002410) #20 CCT6B (ENSCATG00000039984) #21 LIG3 (ENSCATG00000044619) #22 RFFL (ENSCATG00000037355) #23 RAD51D (ENSCATG00000034042) #24 ENSCATG00000031430 #25 ENSCATG00000034997 #26 NLE1 (ENSCATG00000038372) #27 UNC45B (ENSCATG00000038004) #28 SLFN5 (ENSCATG00000042531) #29 SLFN12 (ENSCATG00000037618) #30 SLFN13 (ENSCATG00000013030) #31 ENSCATG00000002686 #32 SLFN12L (ENSCATG00000041013) #33 SLFN14 (ENSCATG00000021975) #34 PEX12 (ENSCATG00000040975) #35 ENSCATG00000044039 #36 AP2B1 (ENSCATG00000031381) #37 Drill MODERN SPECIES 1586 ENSMLEG00000036609 ##12 CCL2 (ENSMLEG00000033769) #13 CCL7 (ENSMLEG00000035566) #14 CCL11 (ENSMLEG00000033600) #15 CCL8 (ENSMLEG00000041698) #16 CCL13 (ENSMLEG00000034878) #17 CCL1 (ENSMLEG00000036790) #18 TMEM132E (ENSMLEG00000039356) #19 CCT6B (ENSMLEG00000037417) #21 ZNF830 (ENSMLEG00000028153) #20 LIG3 (ENSMLEG00000013375) #22 RFFL (ENSMLEG00000041348) #23 RAD51D (ENSMLEG00000029219) #24 FNDC8 (ENSMLEG00000028462) ##25 NLE1 (ENSMLEG00000032806) #27 UNC45B (ENSMLEG00000042348) #28 SLFN5 (ENSMLEG00000034142) #29 Olive baboon MODERN SPECIES 8 ENSPANG00000013718 CDK5R1 (ENSPANG00000016542) #8 MYO1D (ENSPANG00000023030) #9 TMEM98 (ENSPANG00000023031) #10 SPACA3 (ENSPANG00000023033) #11 ASIC2 (ENSPANG00000023034) #12 CCL2 (ENSPANG00000051132) #13 CCL7 (ENSPANG00000038856) #14 CCL11 (ENSPANG00000023037) #15 CCL8 (ENSPANG00000044922) #16 CCL13 (ENSPANG00000023023) #17 CCL1 (ENSPANG00000045394) #18 TMEM132E (ENSPANG00000023021) #19 CCT6B (ENSPANG00000023018) #21 ZNF830 (ENSPANG00000023017) #20 LIG3 (ENSPANG00000022999) #22 RFFL (ENSPANG00000023003) #23 RAD51D (ENSPANG00000022997) #24 FNDC8 (ENSPANG00000022990) ##25 NLE1 (ENSPANG00000022991) #27 UNC45B (ENSPANG00000022993) #28 SLFN5 (ENSPANG00000022994) #29 SLFN11 (ENSPANG00000022995) ##29 SLFN12 (ENSPANG00000022996) #30 SLFN13 (ENSPANG00000048259) #31 SLFN12L (ENSPANG00000030174) #33 ENSPANG00000032536 SLFN14 (ENSPANG00000022979) #34 PEX12 (ENSPANG00000022980) #35 AP2B1 (ENSPANG00000022982) #37 RASL10B (ENSPANG00000046564) Macaca ANCESTRAL SPECIES 4 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458.a.a #26 ENSGT00390000006458.a.b #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00940000153342.b.x #32 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00390000010799.u.b.a.a.b.p.b #36 Macaca_a ANCESTRAL SPECIES 4 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00390000006458.a.b #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.b ENSGT00410000025651.A.b.b #34 ENSGT00940000163244.d.b.b.b.a.a ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 ENSGT00940000162866 Crab-eating macaque MODERN SPECIES 7 ENSMFAG00000055833 TMEM98 (ENSMFAG00000000693) #10 SPACA3 (ENSMFAG00000001727) #11 ASIC2 (ENSMFAG00000007668) #12 ENSMFAG00000059870 ENSMFAG00000053189 CCL2 (ENSMFAG00000053406) #13 CCL7 (ENSMFAG00000031903) #14 CCL11 (ENSMFAG00000060137) #15 CCL8 (ENSMFAG00000041874) #16 CCL13 (ENSMFAG00000002834) #17 CCL1 (ENSMFAG00000036643) #18 TMEM132E (ENSMFAG00000002538) #19 CCT6B (ENSMFAG00000038145) #21 ZNF830 (ENSMFAG00000025776) #20 LIG3 (ENSMFAG00000036202) #22 ENSMFAG00000036080 #23 FNDC8 (ENSMFAG00000000308) #25 NLE1 (ENSMFAG00000037776) #27 UNC45B (ENSMFAG00000036065) #28 SLFN5 (ENSMFAG00000034231) #29 SLFN13 (ENSMFAG00000000114) #31 SLFN12 (ENSMFAG00000001223) #30 SLFN12L (ENSMFAG00000050765) #33 ENSMFAG00000064945 ENSMFAG00000059172 SLFN14 (ENSMFAG00000037905) #34 ENSMFAG00000059317 PEX12 (ENSMFAG00000039486) #35 AP2B1 (ENSMFAG00000032866) #37 RASL10B (ENSMFAG00000059499) Rhesus MODERN SPECIES 7 TMEM98 (ENSMMUG00000022356) #10 SPACA3 (ENSMMUG00000011411) #11 ASIC2 (ENSMMUG00000011413) #12 ENSMMUG00000002324 ENSMMUG00000062894 CCL2 (ENSMMUG00000000288) #13 CCL7 (ENSMMUG00000009782) #14 CCL11 (ENSMMUG00000064793) #15 ENSMMUG00000058490 CCL8 (ENSMMUG00000009784) #16 CCL13 (ENSMMUG00000009785) #17 CCL1 (ENSMMUG00000009786) #18 TMEM132E (ENSMMUG00000012977) #19 CCT6B (ENSMMUG00000006399) #21 ZNF830 (ENSMMUG00000006402) #20 LIG3 (ENSMMUG00000004794) #22 RFFL (ENSMMUG00000000750) #23 FNDC8 (ENSMMUG00000000744) #25 NLE1 (ENSMMUG00000000751) #27 UNC45B (ENSMMUG00000005170) #28 SLFN5 (ENSMMUG00000010082) #29 SLFN13 (ENSMMUG00000037555) #31 SLFN12 (ENSMMUG00000005550) #30 SLFN12L (ENSMMUG00000060439) #33 ENSMMUG00000055108 ENSMMUG00000062650 SLFN14 (ENSMMUG00000048316) #34 ENSMMUG00000031736 PEX12 (ENSMMUG00000006047) #35 AP2B1 (ENSMMUG00000006048) #37 RASL10B (ENSMMUG00000013143) Pig-tailed macaque MODERN SPECIES 116 SPACA3 (ENSMNEG00000033069) #11 ENSMNEG00000045019 #12 ENSMNEG00000026560 ENSMNEG00000030615 ENSMNEG00000012290 ENSMNEG00000006241 ##12 CCL2 (ENSMNEG00000038921) #13 CCL7 (ENSMNEG00000036187) #14 CCL11 (ENSMNEG00000028877) #15 CCL8 (ENSMNEG00000040396) #16 CCL13 (ENSMNEG00000041760) #17 CCL1 (ENSMNEG00000043966) #18 TMEM132E (ENSMNEG00000029646) #19 ZNF830 (ENSMNEG00000005226) #20 CCT6B (ENSMNEG00000041565) #21 LIG3 (ENSMNEG00000039607) #22 RFFL (ENSMNEG00000031746) #23 RAD51D (ENSMNEG00000028511) #24 FNDC8 (ENSMNEG00000041134) #26 NLE1 (ENSMNEG00000032551) #27 UNC45B (ENSMNEG00000036484) #28 SLFN5 (ENSMNEG00000032653) #29 SLFN12 (ENSMNEG00000044024) #30 SLFN13 (ENSMNEG00000033683) #31 ENSMNEG00000029409 #32 ENSMNEG00000045423 SLFN12L (ENSMNEG00000040209) #33 SLFN14 (ENSMNEG00000007518) #34 PEX12 (ENSMNEG00000034562) #35 ENSMNEG00000029590 #36 AP2B1 (ENSMNEG00000042752) #37 Vervet Monkey MODERN SPECIES 7 ENSCSAG00000000557 CDK5R1 (ENSCSAG00000006370) #8 MYO1D (ENSCSAG00000006369) #9 TMEM98 (ENSCSAG00000006365) #10 SPACA3 (ENSCSAG00000006362) #11 ASIC2 (ENSCSAG00000006357) #12 CCL2 (ENSCSAG00000006354) #13 CCL11 (ENSCSAG00000006352) #15 CCL8 (ENSCSAG00000006350) #16 CCL13 (ENSCSAG00000006348) #17 CCL1 (ENSCSAG00000006347) #18 ENSCSAG00000006343 TMEM132E (ENSCSAG00000006340) #19 CCT6B (ENSCSAG00000006334) #21 ZNF830 (ENSCSAG00000000556) #20 LIG3 (ENSCSAG00000006328) #22 RFFL (ENSCSAG00000006321) #23 RAD51D (ENSCSAG00000006316) #24 FNDC8 (ENSCSAG00000006312) #25 NLE1 (ENSCSAG00000006308) #27 UNC45B (ENSCSAG00000006303) #28 SLFN5 (ENSCSAG00000006300) #29 SLFN11 (ENSCSAG00000006296) #31 SLFN12 (ENSCSAG00000006292) #30 SLFN13 (ENSCSAG00000006288) #31 SLFN12L (ENSCSAG00000006280) #33 SLFN14 (ENSCSAG00000006274) #34 PEX12 (ENSCSAG00000006267) #35 AP2B1 (ENSCSAG00000006260) #37 RASL10B (ENSCSAG00000006252) GAS2L2 (ENSCSAG00000006249) Rhinopithecus ANCESTRAL SPECIES 125 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 Golden snub-nosed monkey MODERN SPECIES 2164 ENSRROG00000013351 ##12 CCL2 (ENSRROG00000041329) #13 CCL7 (ENSRROG00000013181) #14 CCL11 (ENSRROG00000033319) #15 CCL8 (ENSRROG00000031197) #16 CCL13 (ENSRROG00000041891) #17 CCL1 (ENSRROG00000036799) #18 TMEM132E (ENSRROG00000032106) #19 CCT6B (ENSRROG00000031362) #21 ZNF830 (ENSRROG00000025698) #20 LIG3 (ENSRROG00000021646) #22 RFFL (ENSRROG00000030398) #23 RAD51D (ENSRROG00000044312) #24 FNDC8 (ENSRROG00000031343) #25 NLE1 (ENSRROG00000039221) #27 UNC45B (ENSRROG00000027903) #28 SLFN5 (ENSRROG00000032585) #29 Black snub-nosed monkey MODERN SPECIES 1024 CDK5R1 (ENSRBIG00000029772) #8 MYO1D (ENSRBIG00000030384) #9 TMEM98 (ENSRBIG00000033509) #10 SPACA3 (ENSRBIG00000031083) #11 ENSRBIG00000011050 ASIC2 (ENSRBIG00000039882) #12 CCL2 (ENSRBIG00000039932) #13 CCL7 (ENSRBIG00000035832) #14 CCL11 (ENSRBIG00000043002) #15 CCL8 (ENSRBIG00000040497) #16 CCL13 (ENSRBIG00000037720) #17 CCL1 (ENSRBIG00000032049) #18 TMEM132E (ENSRBIG00000034726) #19 ZNF830 (ENSRBIG00000029713) #20 CCT6B (ENSRBIG00000043772) #21 LIG3 (ENSRBIG00000029183) #22 RFFL (ENSRBIG00000032096) #23 RAD51D (ENSRBIG00000007671) #24 FNDC8 (ENSRBIG00000041825) #25 NLE1 (ENSRBIG00000035053) #27 UNC45B (ENSRBIG00000036846) #28 Hominoidea ANCESTRAL SPECIES 27 ENSGT00740000117022 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 Hominidae ANCESTRAL SPECIES 20 ENSGT00740000117022 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 ENSGT00940000162866 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00740000117022 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209.c #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209.c #35 ENSGT00940000155206.d.a #37 ENSGT00940000160764 Pan ANCESTRAL SPECIES 3 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062.m #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00390000010391.w.b ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c #30 ENSGT00410000025651.A.b.a.a.b.d #33 ENSGT00940000153342.b.x #32 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209.c #35 Chimpanzee MODERN SPECIES 8 PSMD11 (ENSPTRG00000008990) #7 CDK5R1 (ENSPTRG00000030892) #8 MYO1D (ENSPTRG00000008991) #9 TMEM98 (ENSPTRG00000008993) #10 SPACA3 (ENSPTRG00000049269) #11 ASIC2 (ENSPTRG00000008996) #12 CCL2 (ENSPTRG00000008999) #13 CCL7 (ENSPTRG00000009000) #14 CCL11 (ENSPTRG00000048230) #15 CCL8 (ENSPTRG00000009002) #16 CCL13 (ENSPTRG00000043899) #17 CCL1 (ENSPTRG00000009004) #18 TMEM132E (ENSPTRG00000009005) #19 CCT6B (ENSPTRG00000023221) #21 ZNF830 (ENSPTRG00000009007) #20 LIG3 (ENSPTRG00000009008) #22 RFFL (ENSPTRG00000051761) #23 RAD51D (ENSPTRG00000009010) #24 FNDC8 (ENSPTRG00000009011) #25 NLE1 (ENSPTRG00000009012) #27 UNC45B (ENSPTRG00000009013) #28 ENSPTRG00000047307 SLFN5 (ENSPTRG00000009016) #29 SLFN11 (ENSPTRG00000009017) #31 ENSPTRG00000047496 ENSPTRG00000047996 SLFN12 (ENSPTRG00000009018) #30 SLFN13 (ENSPTRG00000042109) #31 ENSPTRG00000044720 ENSPTRG00000052504 ENSPTRG00000048253 #32 Bonobo MODERN SPECIES 8 MYO1D (ENSPPAG00000036175) #9 TMEM98 (ENSPPAG00000037372) #10 SPACA3 (ENSPPAG00000039834) #11 ENSPPAG00000038474 ENSPPAG00000035274 #12 CCL2 (ENSPPAG00000033176) #13 CCL7 (ENSPPAG00000029310) #14 CCL11 (ENSPPAG00000041920) #15 CCL8 (ENSPPAG00000039853) #16 CCL13 (ENSPPAG00000041440) #17 CCL1 (ENSPPAG00000004362) #18 ENSPPAG00000041711 TMEM132E (ENSPPAG00000034783) #19 CCT6B (ENSPPAG00000037136) #21 ZNF830 (ENSPPAG00000016768) #20 LIG3 (ENSPPAG00000034010) #22 RFFL (ENSPPAG00000030279) #23 RAD51D (ENSPPAG00000026489) #24 FNDC8 (ENSPPAG00000027994) #25 NLE1 (ENSPPAG00000031789) #27 UNC45B (ENSPPAG00000030112) #28 ENSPPAG00000025361 SLFN5 (ENSPPAG00000037908) #29 SLFN11 (ENSPPAG00000039146) #31 ENSPPAG00000038962 ENSPPAG00000024460 SLFN12 (ENSPPAG00000008992) #30 SLFN13 (ENSPPAG00000039054) #31 ENSPPAG00000038367 SLFN12L (ENSPPAG00000026392) #33 ENSPPAG00000035752 Human MODERN SPECIES 8 CDK5R1 (ENSG00000176749) #8 MYO1D (ENSG00000176658) #9 H2BN1 (ENSG00000290320) TMEM98 (ENSG00000006042) #10 SPACA3 (ENSG00000141316) #11 ASIC2 (ENSG00000108684) #12 CCL2 (ENSG00000108691) #13 CCL7 (ENSG00000108688) #14 CCL11 (ENSG00000172156) #15 CCL8 (ENSG00000108700) #16 CCL13 (ENSG00000181374) #17 CCL1 (ENSG00000108702) #18 TMEM132E (ENSG00000181291) #19 CCT6B (ENSG00000132141) #21 ZNF830 (ENSG00000198783) #20 LIG3 (ENSG00000005156) #22 RFFL (ENSG00000092871) #23 ENSG00000267618 RAD51D (ENSG00000185379) #24 FNDC8 (ENSG00000073598) #25 NLE1 (ENSG00000073536) #27 UNC45B (ENSG00000141161) #28 SLC35G3 (ENSG00000164729) SLFN5 (ENSG00000166750) #29 SLFN11 (ENSG00000172716) #31 SLFN12 (ENSG00000172123) #30 SLFN13 (ENSG00000154760) #31 SLFN12L (ENSG00000205045) #33 SLFN14 (ENSG00000236320) #34 PEX12 (ENSG00000108733) #35 AP2B1 (ENSG00000006125) #37 Gorilla MODERN SPECIES 18 MYO1D (ENSGGOG00000000276) #9 TMEM98 (ENSGGOG00000013333) #10 SPACA3 (ENSGGOG00000001125) #11 ENSGGOG00000040939 #12 ENSGGOG00000041068 ##12 CCL2 (ENSGGOG00000016211) #13 CCL7 (ENSGGOG00000004500) #14 ENSGGOG00000044068 #15 ENSGGOG00000044171 #15 CCL8 (ENSGGOG00000004504) #16 CCL13 (ENSGGOG00000002887) #17 CCL1 (ENSGGOG00000028387) #18 TMEM132E (ENSGGOG00000015325) #19 CCT6B (ENSGGOG00000022453) #21 ZNF830 (ENSGGOG00000021990) #20 LIG3 (ENSGGOG00000025637) #22 RFFL (ENSGGOG00000004166) #23 RAD51D (ENSGGOG00000000365) #24 FNDC8 (ENSGGOG00000000367) #25 NLE1 (ENSGGOG00000000368) #27 UNC45B (ENSGGOG00000010763) #28 ENSGGOG00000040207 ENSGGOG00000009494 SLFN5 (ENSGGOG00000011259) #29 SLFN11 (ENSGGOG00000034948) #31 ENSGGOG00000041052 ENSGGOG00000038915 SLFN12 (ENSGGOG00000001620) #30 SLFN13 (ENSGGOG00000014291) #31 ENSGGOG00000042321 ENSGGOG00000041375 #32 Orangutan MODERN SPECIES 8 PSMD11 (ENSPPYG00000008162) #7 CDK5R1 (ENSPPYG00000008163) #8 MYO1D (ENSPPYG00000008164) #9 TMEM98 (ENSPPYG00000008166) #10 SPACA3 (ENSPPYG00000008867) #11 ASIC2 (ENSPPYG00000008167) #12 CCL2 (ENSPPYG00000008169) #13 CCL7 (ENSPPYG00000008170) #14 CCL11 (ENSPPYG00000008171) #15 CCL8 (ENSPPYG00000029480) #16 CCL13 (ENSPPYG00000036667) #17 CCL1 (ENSPPYG00000041084) #18 TMEM132E (ENSPPYG00000008862) #19 CCT6B (ENSPPYG00000008174) #21 ZNF830 (ENSPPYG00000008175) #20 LIG3 (ENSPPYG00000008176) #22 RFFL (ENSPPYG00000008177) #23 RAD51D (ENSPPYG00000008178) #24 FNDC8 (ENSPPYG00000008179) #25 NLE1 (ENSPPYG00000008180) #27 UNC45B (ENSPPYG00000008181) #28 SLFN5 (ENSPPYG00000008182) #29 SLFN11 (ENSPPYG00000038116) #31 ENSPPYG00000039214 SLFN12 (ENSPPYG00000008184) #30 SLFN13 (ENSPPYG00000029995) #31 SLFN12L (ENSPPYG00000008186) #33 SLFN14 (ENSPPYG00000035943) #34 ENSPPYG00000030213 PEX12 (ENSPPYG00000008187) #35 AP2B1 (ENSPPYG00000008188) #37 Gibbon MODERN SPECIES 104 ENSNLEG00000032010 ##12 ENSNLEG00000001467 #13 CCL7 (ENSNLEG00000001485) #14 CCL11 (ENSNLEG00000001500) #15 CCL8 (ENSNLEG00000001511) #16 CCL13 (ENSNLEG00000001516) #17 CCL1 (ENSNLEG00000001527) #18 TMEM132E (ENSNLEG00000001552) #19 CCT6B (ENSNLEG00000001570) #21 ZNF830 (ENSNLEG00000018817) #20 LIG3 (ENSNLEG00000001704) #22 RFFL (ENSNLEG00000001710) #23 RAD51D (ENSNLEG00000001735) #24 FNDC8 (ENSNLEG00000001873) #25 NLE1 (ENSNLEG00000001898) #27 ENSNLEG00000002060 #28 ENSNLEG00000033541 ENSNLEG00000035947 ZNHIT3 (ENSNLEG00000002070) MYO19 (ENSNLEG00000002087) GGNBP2 (ENSNLEG00000002197) ENSNLEG00000028425 DHRS11 (ENSNLEG00000002259) MRM1 (ENSNLEG00000002300) ENSNLEG00000034926 LHX1 (ENSNLEG00000002343) Platyrrhini ANCESTRAL SPECIES 1 ENSGT00530000063301.a.a.i #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Cebidae ANCESTRAL SPECIES 10 ENSGT00530000063301.a.a.i #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Cebidae_a ANCESTRAL SPECIES 1 ENSGT00530000063301.a.a.i #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01060000248892 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Capuchin MODERN SPECIES 85 TMC7 (ENSCCAG00000022773) ENSCCAG00000023215 SMG1 (ENSCCAG00000023693) ENSCCAG00000022043 ENSCCAG00000026038 ENSCCAG00000032285 CCL2 (ENSCCAG00000019141) #13 CCL7 (ENSCCAG00000030103) #14 CCL11 (ENSCCAG00000028564) #15 CCL8 (ENSCCAG00000030231) #16 ENSCCAG00000006712 ENSCCAG00000027028 TMEM132E (ENSCCAG00000032199) #19 ENSCCAG00000025546 CCT6B (ENSCCAG00000033971) #21 LIG3 (ENSCCAG00000004189) #22 RFFL (ENSCCAG00000015388) #23 RAD51D (ENSCCAG00000022233) #24 FNDC8 (ENSCCAG00000021053) #25 NLE1 (ENSCCAG00000030907) #27 UNC45B (ENSCCAG00000020566) #28 SLFN5 (ENSCCAG00000033924) #29 SLFN11 (ENSCCAG00000013862) #31 SLFN14 (ENSCCAG00000024954) #34 PEX12 (ENSCCAG00000022946) #35 AP2B1 (ENSCCAG00000035115) #37 RASL10B (ENSCCAG00000029475) GAS2L2 (ENSCCAG00000025203) C17orf50 (ENSCCAG00000024927) MMP28 (ENSCCAG00000027683) TAF15 (ENSCCAG00000036025) Bolivian squirrel monkey MODERN SPECIES 95 PSMD11 (ENSSBOG00000027961) #7 ENSSBOG00000016899 CDK5R1 (ENSSBOG00000021952) #8 MYO1D (ENSSBOG00000005563) #9 TMEM98 (ENSSBOG00000029612) #10 SPACA3 (ENSSBOG00000031184) #11 ASIC2 (ENSSBOG00000032279) #12 CCL2 (ENSSBOG00000035114) #13 CCL7 (ENSSBOG00000033930) #14 CCL11 (ENSSBOG00000028311) #15 CCL8 (ENSSBOG00000018317) #16 ENSSBOG00000032338 CCL1 (ENSSBOG00000014955) #18 TMEM132E (ENSSBOG00000029140) #19 CCT6B (ENSSBOG00000025684) #21 LIG3 (ENSSBOG00000030290) #22 RFFL (ENSSBOG00000028909) #23 RAD51D (ENSSBOG00000033587) #24 FNDC8 (ENSSBOG00000029279) #25 NLE1 (ENSSBOG00000023552) #27 UNC45B (ENSSBOG00000019113) #28 ENSSBOG00000032707 ALOX15 (ENSSBOG00000031283) SMTNL2 (ENSSBOG00000031152) GGT6 (ENSSBOG00000028876) MYBBP1A (ENSSBOG00000020401) SPNS2 (ENSSBOG00000022897) SPNS3 (ENSSBOG00000029998) ENSSBOG00000025559 ANKFY1 (ENSSBOG00000034382) CYB5D2 (ENSSBOG00000016637) Marmoset MODERN SPECIES 17 PSMD11 (ENSCJAG00000014450) #7 CDK5R1 (ENSCJAG00000047608) #8 MYO1D (ENSCJAG00000014516) #9 TMEM98 (ENSCJAG00000014550) #10 SPACA3 (ENSCJAG00000014561) #11 ENSCJAG00000051816 #12 ASIC2 (ENSCJAG00000014568) #12 CCL7 (ENSCJAG00000062725) #14 CCL2 (ENSCJAG00000057655) #13 CCL8 (ENSCJAG00000038352) #16 CCL13 (ENSCJAG00000042890) #17 ENSCJAG00000076401 TMEM132E (ENSCJAG00000014632) #19 CCT6B (ENSCJAG00000014646) #21 ZNF830 (ENSCJAG00000058086) #20 LIG3 (ENSCJAG00000014668) #22 RFFL (ENSCJAG00000014721) #23 RAD51D (ENSCJAG00000014732) #24 FNDC8 (ENSCJAG00000014751) #25 NLE1 (ENSCJAG00000014757) #27 UNC45B (ENSCJAG00000014785) #28 SLFN11 (ENSCJAG00000014834) #31 ENSCJAG00000059081 SLFN14 (ENSCJAG00000014840) #34 PEX12 (ENSCJAG00000014844) #35 ENSCJAG00000083842 SLFN5 (ENSCJAG00000014853) #29 RASL10B (ENSCJAG00000040221) GAS2L2 (ENSCJAG00000014938) C17orf50 (ENSCJAG00000014952) MMP28 (ENSCJAG00000047189) Mas night monkey MODERN SPECIES 805 LIG3 (ENSANAG00000027289) #22 RFFL (ENSANAG00000024559) #23 RAD51D (ENSANAG00000026327) #24 FNDC8 (ENSANAG00000038020) #25 NLE1 (ENSANAG00000029916) #27 UNC45B (ENSANAG00000029104) #28 ENSANAG00000018728 ENSANAG00000020029 ENSANAG00000019510 SLFN5 (ENSANAG00000020516) #29 SLFN11 (ENSANAG00000018777) #31 ENSANAG00000038116 SLFN14 (ENSANAG00000038117) #34 PEX12 (ENSANAG00000007379) #35 ENSANAG00000019452 #37 RASL10B (ENSANAG00000022158) Tarsier MODERN SPECIES 1036 LIG3 (ENSTSYG00000008882) #22 RFFL (ENSTSYG00000029949) #23 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Mouse lemur MODERN SPECIES 7 C17orf75 (ENSMICG00000007788) ZNF207 (ENSMICG00000002395) ENSMICG00000026860 PSMD11 (ENSMICG00000011849) #7 CDK5R1 (ENSMICG00000042797) #8 MYO1D (ENSMICG00000011863) #9 TMEM98 (ENSMICG00000011888) #10 SPACA3 (ENSMICG00000043535) #11 ASIC2 (ENSMICG00000035781) #12 CCL2 (ENSMICG00000034682) #13 CCL8 (ENSMICG00000037888) #16 CCL13 (ENSMICG00000036035) #17 CCL1 (ENSMICG00000042374) #18 TMEM132E (ENSMICG00000003085) #19 CCT6B (ENSMICG00000035976) #21 LIG3 (ENSMICG00000006814) #22 RFFL (ENSMICG00000006829) #23 RAD51D (ENSMICG00000043657) #24 FNDC8 (ENSMICG00000044023) #25 NLE1 (ENSMICG00000001256) #27 UNC45B (ENSMICG00000001264) #28 SLFN5 (ENSMICG00000033107) #29 SLFN13 (ENSMICG00000047620) #31 SLFN14 (ENSMICG00000017034) #34 PEX12 (ENSMICG00000045292) #35 AP2B1 (ENSMICG00000017045) #37 RASL10B (ENSMICG00000034231) ENSMICG00000030480 C17orf50 (ENSMICG00000017049) MMP28 (ENSMICG00000017052) TAF15 (ENSMICG00000017057) Lemuriformes_a ANCESTRAL SPECIES ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Coquerels sifaka MODERN SPECIES 414 CCT6B (ENSPCOG00000022222) #21 LIG3 (ENSPCOG00000025771) #22 RFFL (ENSPCOG00000014273) #23 RAD51D (ENSPCOG00000019951) #24 FNDC8 (ENSPCOG00000025950) #25 NLE1 (ENSPCOG00000016524) #27 UNC45B (ENSPCOG00000026606) #28 SLFN5 (ENSPCOG00000000263) #29 SLFN13 (ENSPCOG00000015060) #31 SLFN14 (ENSPCOG00000019040) #34 PEX12 (ENSPCOG00000018773) #35 ENSPCOG00000021710 #37 RASL10B (ENSPCOG00000010262) GAS2L2 (ENSPCOG00000008823) ENSPCOG00000017213 MMP28 (ENSPCOG00000021300) TAF15 (ENSPCOG00000007032) Greater bamboo lemur MODERN SPECIES 167 PSMD11 (ENSPSMG00000016979) #7 CDK5R1 (ENSPSMG00000016985) #8 MYO1D (ENSPSMG00000017027) #9 TMEM98 (ENSPSMG00000017093) #10 SPACA3 (ENSPSMG00000017102) #11 ASIC2 (ENSPSMG00000017117) #12 CCL2 (ENSPSMG00000017119) #13 ENSPSMG00000017122 #14 CCL11 (ENSPSMG00000017132) #15 CCL8 (ENSPSMG00000017139) #16 CCL13 (ENSPSMG00000017153) #17 TMEM132E (ENSPSMG00000017176) #19 ENSPSMG00000017180 CCT6B (ENSPSMG00000017271) #21 ZNF830 (ENSPSMG00000017386) #20 LIG3 (ENSPSMG00000017498) #22 RFFL (ENSPSMG00000017643) #23 RAD51D (ENSPSMG00000017716) #24 FNDC8 (ENSPSMG00000017734) #25 NLE1 (ENSPSMG00000017794) #27 UNC45B (ENSPSMG00000017855) #28 ENSPSMG00000017874 #29 ENSPSMG00000017877 #29 SLFN13 (ENSPSMG00000017890) #31 ENSPSMG00000017899 SLFN14 (ENSPSMG00000017906) #34 PEX12 (ENSPSMG00000017923) #35 AP2B1 (ENSPSMG00000018648) #37 RASL10B (ENSPSMG00000019772) GAS2L2 (ENSPSMG00000019805) C17orf50 (ENSPSMG00000019813) Bushbaby MODERN SPECIES 227 ENSOGAG00000001200 PSMD11 (ENSOGAG00000015456) #7 CDK5R1 (ENSOGAG00000034547) #8 MYO1D (ENSOGAG00000015457) #9 TMEM98 (ENSOGAG00000015459) #10 SPACA3 (ENSOGAG00000025382) #11 ASIC2 (ENSOGAG00000015461) #12 CCL7 (ENSOGAG00000003894) #14 CCL11 (ENSOGAG00000003893) #15 ENSOGAG00000028610 ##13 CCL13 (ENSOGAG00000003892) #17 ENSOGAG00000003889 #18 TMEM132E (ENSOGAG00000008267) #19 CCT6B (ENSOGAG00000009862) #21 ZNF830 (ENSOGAG00000009870) #20 LIG3 (ENSOGAG00000009871) #22 RFFL (ENSOGAG00000024777) #23 RAD51D (ENSOGAG00000009880) #24 FNDC8 (ENSOGAG00000009884) #25 NLE1 (ENSOGAG00000009885) #27 UNC45B (ENSOGAG00000009891) #28 SLFN5 (ENSOGAG00000025496) #29 ENSOGAG00000001405 #31 ENSOGAG00000016489 #31 ENSOGAG00000001409 #30 Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 Glires ANCESTRAL SPECIES 3 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 Rodentia ANCESTRAL SPECIES 4 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT01060000250264 ENSGT00940000154849.a Rodentia_B ANCESTRAL SPECIES 1 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b.d #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Myomorpha ANCESTRAL SPECIES ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01100000263482.F #18 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b.d #15 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Muroidea ANCESTRAL SPECIES ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b.d #15 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 Cricetidae ANCESTRAL SPECIES ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 Cricetidae_B ANCESTRAL SPECIES ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 Northern American deer mouse MODERN SPECIES 21 Cdk5r1 (ENSPEMG00000004672) #8 Myo1d (ENSPEMG00000021437) #9 Tmem98 (ENSPEMG00000015639) #10 Spaca3 (ENSPEMG00000008847) #11 Asic2 (ENSPEMG00000022612) #12 ENSPEMG00000021078 Ccl2 (ENSPEMG00000024087) #13 Ccl7 (ENSPEMG00000022329) #14 Ccl11 (ENSPEMG00000031393) ##13 Ccl12 (ENSPEMG00000018710) #14 Ccl8 (ENSPEMG00000024303) ##13 ENSPEMG00000022558 Tmem132e (ENSPEMG00000016046) #19 Cct6b (ENSPEMG00000022000) #21 Zfp830 (ENSPEMG00000024107) #20 Lig3 (ENSPEMG00000021826) #22 Rffl (ENSPEMG00000023690) #23 Rad51d (ENSPEMG00000022893) #24 Fndc8 (ENSPEMG00000012327) #25 Nle1 (ENSPEMG00000023993) #27 Unc45b (ENSPEMG00000008983) #28 Slfn5 (ENSPEMG00000021448) #29 Slfn9 (ENSPEMG00000010005) #31 ENSPEMG00000024894 ENSPEMG00000010010 Slfn14 (ENSPEMG00000012902) #34 Pex12 (ENSPEMG00000030925) #35 Ap2b1 (ENSPEMG00000018294) #37 Rasl10b (ENSPEMG00000027697) Gas2l2 (ENSPEMG00000018233) 1700020L24Rik (ENSPEMG00000013417) Prairie vole MODERN SPECIES 15 ENSMOCG00000012529 #7 Cdk5r1 (ENSMOCG00000001690) #8 Myo1d (ENSMOCG00000018702) #9 Tmem98 (ENSMOCG00000019650) #10 Spaca3 (ENSMOCG00000019356) #11 Asic2 (ENSMOCG00000011922) #12 Ccl2 (ENSMOCG00000017496) #13 Ccl7 (ENSMOCG00000014487) #14 Ccl11 (ENSMOCG00000003156) ##13 Ccl12 (ENSMOCG00000009094) #14 Ccl8 (ENSMOCG00000006845) ##13 Ccl1 (ENSMOCG00000005819) Tmem132e (ENSMOCG00000017883) #19 Cct6b (ENSMOCG00000015382) #21 Zfp830 (ENSMOCG00000002661) #20 Lig3 (ENSMOCG00000013887) #22 Rffl (ENSMOCG00000005235) #23 Rad51d (ENSMOCG00000019246) #24 Fndc8 (ENSMOCG00000016181) #25 Nle1 (ENSMOCG00000005383) #27 Unc45b (ENSMOCG00000016526) #28 Slfn5 (ENSMOCG00000010517) #29 ENSMOCG00000018543 #31 Slfn2 (ENSMOCG00000021779) #30 Slfn1 (ENSMOCG00000005408) #30 Slfn14 (ENSMOCG00000008378) #34 Pex12 (ENSMOCG00000016233) #35 Ap2b1 (ENSMOCG00000014475) #37 Rasl10b (ENSMOCG00000001964) Gas2l2 (ENSMOCG00000005581) 1700020L24Rik (ENSMOCG00000019897) Cricetinae ANCESTRAL SPECIES ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 Golden Hamster MODERN SPECIES 684 ENSMAUG00000009545 Myo1d (ENSMAUG00000013009) #9 Tmem98 (ENSMAUG00000012837) #10 Spaca3 (ENSMAUG00000018445) #11 Asic2 (ENSMAUG00000010967) #12 Ccl2 (ENSMAUG00000020623) #13 ENSMAUG00000012536 Ccl7 (ENSMAUG00000011314) #14 Ccl11 (ENSMAUG00000015725) ##13 Ccl12 (ENSMAUG00000013327) #14 Ccl8 (ENSMAUG00000018176) ##13 ENSMAUG00000013646 #18 Tmem132e (ENSMAUG00000016009) #19 Cct6b (ENSMAUG00000001673) #21 Zfp830 (ENSMAUG00000012194) #20 Lig3 (ENSMAUG00000020082) #22 Rffl (ENSMAUG00000003967) #23 Rad51d (ENSMAUG00000009497) #24 Fndc8 (ENSMAUG00000016080) #25 Nle1 (ENSMAUG00000016623) #27 Unc45b (ENSMAUG00000011322) #28 ENSMAUG00000009126 #29 Slfn9 (ENSMAUG00000013430) #31 Slfn1 (ENSMAUG00000003013) #30 Slfn14 (ENSMAUG00000020439) #34 Pex12 (ENSMAUG00000004768) #35 Ap2b1 (ENSMAUG00000021295) #37 Rasl10b (ENSMAUG00000011536) Gas2l2 (ENSMAUG00000001264) ENSMAUG00000018386 Heatr9 (ENSMAUG00000019408) Chinese hamster chok1gshd MODERN SPECIES 33 Nono (ENSCGRG00001000065) Itgb1bp2 (ENSCGRG00001021490) Taf1 (ENSCGRG00001016967) Tmem98 (ENSCGRG00001000052) #10 Spaca3 (ENSCGRG00001020949) #11 Asic2 (ENSCGRG00001013978) #12 Ccl2 (ENSCGRG00001010610) #13 Ccl7 (ENSCGRG00001016678) #14 Ccl11 (ENSCGRG00001018174) ##13 Ccl12 (ENSCGRG00001015572) #14 ENSCGRG00001022162 ENSCGRG00001006677 #18 Tmem132e (ENSCGRG00001013155) #19 Cct6b (ENSCGRG00001020850) #21 Zfp830 (ENSCGRG00001003631) #20 Lig3 (ENSCGRG00001004370) #22 Rffl (ENSCGRG00001019316) #23 Rad51d (ENSCGRG00001012167) #24 Fndc8 (ENSCGRG00001013060) #25 Nle1 (ENSCGRG00001009877) #27 Unc45b (ENSCGRG00001022400) #28 Slfn5 (ENSCGRG00001016905) #29 Slfn9 (ENSCGRG00001021962) #31 Slfn2 (ENSCGRG00001022663) #30 Slfn1 (ENSCGRG00001009249) #30 ENSCGRG00001019431 #30 Slfn14 (ENSCGRG00001017464) #34 Pex12 (ENSCGRG00001019900) #35 Ap2b1 (ENSCGRG00001020053) #37 Rasl10b (ENSCGRG00001010269) Gas2l2 (ENSCGRG00001022937) Murinae ANCESTRAL SPECIES 6 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 Mus ANCESTRAL SPECIES 2 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b.a #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 Mus_B ANCESTRAL SPECIES 2 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b.b #30 ENSGT00410000025651.A.b.a.a.b.e.b.a #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 Mus_C ANCESTRAL SPECIES 3 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.c.b ##13 ENSGT01100000263482.A.a.a.d.a.a.a.a.a #14 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b.e.a #30 ENSGT00410000025651.A.b.a.a.b.f #30 ENSGT00410000025651.A.b.a.a.b.e.b.a #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 spretus MODERN SPECIES 2 Myo1d (MGP_SPRETEiJ_G0017685) #9 Tmem98 (MGP_SPRETEiJ_G0017686) #10 Spaca3 (MGP_SPRETEiJ_G0017687) #11 Asic2 (MGP_SPRETEiJ_G0017688) #12 MGP_SPRETEiJ_G0017689 MGP_SPRETEiJ_G0017690 Ccl2 (MGP_SPRETEiJ_G0017691) #13 Ccl7 (MGP_SPRETEiJ_G0017692) #14 Ccl11 (MGP_SPRETEiJ_G0017693) ##13 Ccl12 (MGP_SPRETEiJ_G0017694) #14 Ccl8 (MGP_SPRETEiJ_G0017695) ##13 Ccl1 (MGP_SPRETEiJ_G0017696) Tmem132e (MGP_SPRETEiJ_G0017697) #19 Cct6b (MGP_SPRETEiJ_G0017698) #21 Zfp830 (MGP_SPRETEiJ_G0017699) #20 Lig3 (MGP_SPRETEiJ_G0017700) #22 Rffl (MGP_SPRETEiJ_G0017701) #23 Rad51d (MGP_SPRETEiJ_G0017702) #24 Fndc8 (MGP_SPRETEiJ_G0017703) #25 Nle1 (MGP_SPRETEiJ_G0017704) #27 Unc45b (MGP_SPRETEiJ_G0017705) #28 Slfn5 (MGP_SPRETEiJ_G0017706) #29 MGP_SPRETEiJ_G0017707 #31 MGP_SPRETEiJ_G0017708 #31 Slfn2 (MGP_SPRETEiJ_G0017709) #30 Slfn1 (MGP_SPRETEiJ_G0017710) #30 MGP_SPRETEiJ_G0017711 #30 MGP_SPRETEiJ_G0017712 #30 Slfn14 (MGP_SPRETEiJ_G0017713) #34 Pex12 (MGP_SPRETEiJ_G0017714) #35 Ap2b1 (MGP_SPRETEiJ_G0017715) #37 Steppe mouse MODERN SPECIES 3351 Tmem98 (ENSMSIG00000007161) #10 Spaca3 (ENSMSIG00000007147) #11 ENSMSIG00000007120 Asic2 (ENSMSIG00000007029) #12 Ccl2 (ENSMSIG00000007015) #13 ENSMSIG00000006998 Ccl7 (ENSMSIG00000006992) #14 Ccl11 (ENSMSIG00000006983) ##13 Ccl12 (ENSMSIG00000006962) #14 Ccl8 (ENSMSIG00000006943) ##13 Ccl1 (ENSMSIG00000006904) Tmem132e (ENSMSIG00000006801) #19 ENSMSIG00000006783 Cct6b (ENSMSIG00000006565) #21 Zfp830 (ENSMSIG00000006544) #20 Lig3 (ENSMSIG00000006247) #22 ENSMSIG00000006067 #23 Rad51d (ENSMSIG00000005840) #24 Fndc8 (ENSMSIG00000005819) #25 Nle1 (ENSMSIG00000005791) #27 Unc45b (ENSMSIG00000005522) #28 ENSMSIG00000005499 Slfn5 (ENSMSIG00000005472) #29 Mouse MODERN SPECIES 2 Psmd11 (ENSMUSG00000017428) #7 Cdk5r1 (ENSMUSG00000048895) #8 Myo1d (ENSMUSG00000035441) #9 Tmem98 (ENSMUSG00000035413) #10 Spaca3 (ENSMUSG00000053184) #11 Asic2 (ENSMUSG00000020704) #12 Ccl2 (ENSMUSG00000035385) #13 Ccl7 (ENSMUSG00000035373) #14 Ccl11 (ENSMUSG00000020676) ##13 Ccl12 (ENSMUSG00000035352) #14 Ccl8 (ENSMUSG00000009185) ##13 Ccl1 (ENSMUSG00000020702) Tmem132e (ENSMUSG00000020701) #19 Cct6b (ENSMUSG00000020698) #21 Zfp830 (ENSMUSG00000046010) #20 Lig3 (ENSMUSG00000020697) #22 Rffl (ENSMUSG00000020696) #23 Rad51d (ENSMUSG00000018841) #24 Fndc8 (ENSMUSG00000018844) #25 Nle1 (ENSMUSG00000020692) #27 Unc45b (ENSMUSG00000018845) #28 Slfn5 (ENSMUSG00000054404) #29 Slfn9 (ENSMUSG00000069793) #31 Slfn8 (ENSMUSG00000035208) #31 Slfn2 (ENSMUSG00000072620) #30 Slfn1 (ENSMUSG00000078763) #30 Slfn4 (ENSMUSG00000000204) #30 Slfn3 (ENSMUSG00000018986) #30 Slfn14 (ENSMUSG00000082101) #34 Pex12 (ENSMUSG00000018733) #35 Ap2b1 (ENSMUSG00000035152) #37 Ryukyu mouse MODERN SPECIES 2 Myo1d (MGP_CAROLIEiJ_G0016841) #9 Tmem98 (MGP_CAROLIEiJ_G0016842) #10 Spaca3 (MGP_CAROLIEiJ_G0016843) #11 Asic2 (MGP_CAROLIEiJ_G0016844) #12 MGP_CAROLIEiJ_G0016845 MGP_CAROLIEiJ_G0016846 Ccl2 (MGP_CAROLIEiJ_G0016847) #13 Ccl7 (MGP_CAROLIEiJ_G0016848) #14 Ccl11 (MGP_CAROLIEiJ_G0016849) ##13 Ccl12 (MGP_CAROLIEiJ_G0016850) #14 Ccl8 (MGP_CAROLIEiJ_G0016851) ##13 Ccl1 (MGP_CAROLIEiJ_G0016852) Tmem132e (MGP_CAROLIEiJ_G0016853) #19 Cct6b (MGP_CAROLIEiJ_G0016854) #21 Zfp830 (MGP_CAROLIEiJ_G0016855) #20 Lig3 (MGP_CAROLIEiJ_G0016856) #22 Rffl (MGP_CAROLIEiJ_G0016857) #23 Rad51d (MGP_CAROLIEiJ_G0016858) #24 Fndc8 (MGP_CAROLIEiJ_G0016859) #25 Nle1 (MGP_CAROLIEiJ_G0016860) #27 Unc45b (MGP_CAROLIEiJ_G0016861) #28 MGP_CAROLIEiJ_G0016862 #29 MGP_CAROLIEiJ_G0016863 #31 MGP_CAROLIEiJ_G0016864 #31 Slfn2 (MGP_CAROLIEiJ_G0016865) #30 Slfn1 (MGP_CAROLIEiJ_G0016866) #30 MGP_CAROLIEiJ_G0016867 #30 MGP_CAROLIEiJ_G0016868 #30 Slfn14 (MGP_CAROLIEiJ_G0016869) #34 Pex12 (MGP_CAROLIEiJ_G0016870) #35 Ap2b1 (MGP_CAROLIEiJ_G0016871) #37 Shrew mouse MODERN SPECIES 5 Myo1d (MGP_PahariEiJ_G0017978) #9 Tmem98 (MGP_PahariEiJ_G0017979) #10 Spaca3 (MGP_PahariEiJ_G0017980) #11 Asic2 (MGP_PahariEiJ_G0017981) #12 MGP_PahariEiJ_G0017982 MGP_PahariEiJ_G0017983 Ccl2 (MGP_PahariEiJ_G0017984) #13 Ccl7 (MGP_PahariEiJ_G0017985) #14 Ccl11 (MGP_PahariEiJ_G0017986) ##13 MGP_PahariEiJ_G0017987 #14 MGP_PahariEiJ_G0017988 ##13 Ccl1 (MGP_PahariEiJ_G0017989) Tmem132e (MGP_PahariEiJ_G0017990) #19 Cct6b (MGP_PahariEiJ_G0017991) #21 Zfp830 (MGP_PahariEiJ_G0017992) #20 Lig3 (MGP_PahariEiJ_G0017993) #22 Rffl (MGP_PahariEiJ_G0017994) #23 Rad51d (MGP_PahariEiJ_G0017995) #24 Fndc8 (MGP_PahariEiJ_G0017996) #25 Nle1 (MGP_PahariEiJ_G0017997) #27 Unc45b (MGP_PahariEiJ_G0017998) #28 Slfn5 (MGP_PahariEiJ_G0017999) #29 Slfn14 (MGP_PahariEiJ_G0018000) #34 Pex12 (MGP_PahariEiJ_G0018001) #35 Ap2b1 (MGP_PahariEiJ_G0018002) #37 Rasl10b (MGP_PahariEiJ_G0018003) Gas2l2 (MGP_PahariEiJ_G0018004) 1700020L24Rik (MGP_PahariEiJ_G0018005) Mmp28 (MGP_PahariEiJ_G0018006) Taf15 (MGP_PahariEiJ_G0018007) Heatr9 (MGP_PahariEiJ_G0018008) Rat MODERN SPECIES 1 Tmem98 (ENSRNOG00000021316) #10 Spaca3 (ENSRNOG00000006994) #11 Asic2 (ENSRNOG00000058308) #12 AABR07030122.1 (ENSRNOG00000030217) ENSRNOG00000063667 ENSRNOG00000068272 Ccl2 (ENSRNOG00000007159) #13 Ccl7 (ENSRNOG00000000239) #14 Ccl11 (ENSRNOG00000007335) ##13 Ccl12 (ENSRNOG00000029768) #14 Ccl1 (ENSRNOG00000021851) Tmem132e (ENSRNOG00000007455) #19 Cct6b (ENSRNOG00000007523) #21 AC095947.1 (ENSRNOG00000030291) Zfp830 (ENSRNOG00000007578) #20 Lig3 (ENSRNOG00000021815) #22 Rffl (ENSRNOG00000007596) #23 Fndc8 (ENSRNOG00000008264) #25 Nle1 (ENSRNOG00000008287) #27 Unc45b (ENSRNOG00000009466) #28 ENSRNOG00000062443 Slfn5 (ENSRNOG00000021719) #29 Slfn13 (ENSRNOG00000021412) #31 ENSRNOG00000063847 LOC108352183 (ENSRNOG00000037114) Slfn2 (ENSRNOG00000037113) #30 Slfn1 (ENSRNOG00000048053) #30 Slfn4 (ENSRNOG00000057092) Slfn4 (ENSRNOG00000063541) #30 LOC688925 (ENSRNOG00000032135) AC118772.2 (ENSRNOG00000021357) #30 Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Cdk5r1 (ENSNGAG00000015681) #8 Myo1d (ENSNGAG00000014753) #9 Tmem98 (ENSNGAG00000000432) #10 Spaca3 (ENSNGAG00000019287) #11 Asic2 (ENSNGAG00000017605) #12 Ccl2 (ENSNGAG00000013703) #13 Ccl7 (ENSNGAG00000012785) #14 ENSNGAG00000010601 #15 Ccl12 (ENSNGAG00000015220) #14 ENSNGAG00000008109 #15 Ccl1 (ENSNGAG00000003526) Tmem132e (ENSNGAG00000014402) #19 ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) #21 Zfp830 (ENSNGAG00000014849) #20 Lig3 (ENSNGAG00000019767) #22 Rffl (ENSNGAG00000017708) #23 Rad51d (ENSNGAG00000008118) #24 Fndc8 (ENSNGAG00000019921) #25 Nle1 (ENSNGAG00000012348) #27 Unc45b (ENSNGAG00000000238) #28 Slfn5 (ENSNGAG00000014194) #29 ENSNGAG00000020404 #31 Slfn14 (ENSNGAG00000011735) #34 ENSNGAG00000016398 ENSNGAG00000013242 ENSNGAG00000009444 #37 Rasl10b (ENSNGAG00000002106) ENSNGAG00000019453 1700020L24Rik (ENSNGAG00000019913) Mmp28 (ENSNGAG00000014473) Lesser Egyptian jerboa MODERN SPECIES 112 Rhbdl3 (ENSJJAG00000010070) ENSJJAG00000023980 ENSJJAG00000017956 Psmd11 (ENSJJAG00000015236) #7 Cdk5r1 (ENSJJAG00000010662) #8 Myo1d (ENSJJAG00000015684) #9 Tmem98 (ENSJJAG00000017013) #10 Spaca3 (ENSJJAG00000023074) #11 ENSJJAG00000022033 Asic2 (ENSJJAG00000016957) #12 Ccl12 (ENSJJAG00000003016) #14 ENSJJAG00000016181 #15 Tmem132e (ENSJJAG00000018290) #19 Cct6b (ENSJJAG00000014826) #21 Zfp830 (ENSJJAG00000010210) #20 Lig3 (ENSJJAG00000003848) #22 Rffl (ENSJJAG00000020929) #23 Rad51d (ENSJJAG00000014931) #24 Fndc8 (ENSJJAG00000018336) #25 Nle1 (ENSJJAG00000008356) #27 Unc45b (ENSJJAG00000018066) #28 ENSJJAG00000016743 ENSJJAG00000020087 #31 ENSJJAG00000024250 #30 ENSJJAG00000018288 Slfn14 (ENSJJAG00000016028) #34 ENSJJAG00000008010 Ap2b1 (ENSJJAG00000023688) #37 Rasl10b (ENSJJAG00000011469) ENSJJAG00000020015 1700020L24Rik (ENSJJAG00000011369) Kangaroo rat MODERN SPECIES 338 Cct6b (ENSDORG00000001249) #21 Lig3 (ENSDORG00000013422) #22 Rffl (ENSDORG00000013424) #23 Rad51d (ENSDORG00000024542) #24 Fndc8 (ENSDORG00000000843) #25 Nle1 (ENSDORG00000000845) #27 Unc45b (ENSDORG00000000847) #28 ENSDORG00000023333 #31 Pex12 (ENSDORG00000026935) #35 Ap2b1 (ENSDORG00000003803) #37 Rasl10b (ENSDORG00000003805) ENSDORG00000026155 1700020L24Rik (ENSDORG00000003808) Mmp28 (ENSDORG00000003809) Taf15 (ENSDORG00000014619) ENSDORG00000003141 Ccl5 (ENSDORG00000007688) ##13 Rodentia_A ANCESTRAL SPECIES 3 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT01060000250264 ENSGT00940000154849.a Sciuridae ANCESTRAL SPECIES 4 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 Marmotini ANCESTRAL SPECIES 39 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 Marmotini_b ANCESTRAL SPECIES 34 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 Arctic ground squirrel MODERN SPECIES 509 ENSUPAG00010005745 ##12 ENSUPAG00010005748 #13 CCL7 (ENSUPAG00010005751) #14 CCL11 (ENSUPAG00010005759) #15 ENSUPAG00010005763 ##13 ENSUPAG00010005764 TMEM132E (ENSUPAG00010005767) #19 CCT6B (ENSUPAG00010005803) #21 ZNF830 (ENSUPAG00010005818) #20 LIG3 (ENSUPAG00010005820) #22 RFFL (ENSUPAG00010005896) #23 RAD51D (ENSUPAG00010005916) #24 FNDC8 (ENSUPAG00010005950) #25 NLE1 (ENSUPAG00010005955) #27 UNC45B (ENSUPAG00010005972) #28 Squirrel MODERN SPECIES 138 C17orf75 (ENSSTOG00000000705) ENSSTOG00000000712 PSMD11 (ENSSTOG00000009686) #7 CDK5R1 (ENSSTOG00000009703) #8 MYO1D (ENSSTOG00000000438) #9 TMEM98 (ENSSTOG00000011945) #10 ASIC2 (ENSSTOG00000027185) #12 ENSSTOG00000028166 #13 CCL7 (ENSSTOG00000032557) #14 CCL11 (ENSSTOG00000012718) #15 ENSSTOG00000023292 ##13 CCL1 (ENSSTOG00000007409) #18 TMEM132E (ENSSTOG00000024193) #19 CCT6B (ENSSTOG00000027687) #21 ZNF830 (ENSSTOG00000006057) #20 LIG3 (ENSSTOG00000006065) #22 RFFL (ENSSTOG00000006115) #23 RAD51D (ENSSTOG00000006142) #24 FNDC8 (ENSSTOG00000006165) #25 NLE1 (ENSSTOG00000006174) #27 UNC45B (ENSSTOG00000006194) #28 Alpin marmot MODERN SPECIES 71 ZNF207 (ENSMMMG00000013387) PSMD11 (ENSMMMG00000013441) #7 CDK5R1 (ENSMMMG00000013447) #8 MYO1D (ENSMMMG00000013449) #9 ENSMMMG00000013474 #10 SPACA3 (ENSMMMG00000013483) #11 ASIC2 (ENSMMMG00000013492) #12 ENSMMMG00000013509 #13 CCL7 (ENSMMMG00000013514) #14 CCL11 (ENSMMMG00000013522) #15 ENSMMMG00000013534 ##13 ENSMMMG00000013542 ENSMMMG00000013547 #19 CCT6B (ENSMMMG00000013567) #21 ZNF830 (ENSMMMG00000013592) #20 LIG3 (ENSMMMG00000013596) #22 RFFL (ENSMMMG00000013887) #23 RAD51D (ENSMMMG00000013919) #24 FNDC8 (ENSMMMG00000013980) #25 NLE1 (ENSMMMG00000013986) #27 Eurasian red squirrel MODERN SPECIES 12 NATD1 (ENSSVLG00005005732) MAP2K3 (ENSSVLG00005005697) ENSSVLG00005005684 ENSSVLG00005005663 ENSSVLG00005005651 ENSSVLG00005005625 ENSSVLG00005005588 ENSSVLG00005005549 ENSSVLG00005005526 CCL11 (ENSSVLG00005013421) #15 CCL7 (ENSSVLG00005013388) #14 CCL1 (ENSSVLG00005013323) #18 TMEM132E (ENSSVLG00005013218) #19 CCT6B (ENSSVLG00005012972) #21 ZNF830 (ENSSVLG00005012926) #20 LIG3 (ENSSVLG00005012872) #22 RFFL (ENSSVLG00005012713) #23 RAD51D (ENSSVLG00005012550) #24 FNDC8 (ENSSVLG00005012462) #25 NLE1 (ENSSVLG00005012107) #27 UNC45B (ENSSVLG00005011413) #28 ENSSVLG00005011336 #29 ENSSVLG00005011301 ENSSVLG00005011281 #29 ENSSVLG00005011264 #29 SLFN13 (ENSSVLG00005011190) #31 SLFN14 (ENSSVLG00005011129) #34 PEX12 (ENSSVLG00005011091) #35 AP2B1 (ENSSVLG00005010470) #37 RASL10B (ENSSVLG00005010407) GAS2L2 (ENSSVLG00005010308) Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.c.a.a ##13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a.b ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.c.a.a ##13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a.b ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000162866 ENSGT00390000007830 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.c.a.a ##13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a.b ##13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT01100000264661 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Long-tailed chinchilla MODERN SPECIES 188 ZNF207 (ENSCLAG00000006441) PSMD11 (ENSCLAG00000009489) #7 CDK5R1 (ENSCLAG00000017838) #8 MYO1D (ENSCLAG00000009101) #9 TMEM98 (ENSCLAG00000007965) #10 SPACA3 (ENSCLAG00000008459) #11 ASIC2 (ENSCLAG00000004876) #12 ENSCLAG00000005731 ##13 ENSCLAG00000006066 ##13 CCL11 (ENSCLAG00000004752) #15 ENSCLAG00000005107 ##13 ENSCLAG00000006411 TMEM132E (ENSCLAG00000006946) #19 CCT6B (ENSCLAG00000014724) #21 ZNF830 (ENSCLAG00000017672) #20 LIG3 (ENSCLAG00000009138) #22 RFFL (ENSCLAG00000010681) #23 RAD51D (ENSCLAG00000004975) #24 FNDC8 (ENSCLAG00000006982) #25 NLE1 (ENSCLAG00000008143) #27 UNC45B (ENSCLAG00000013212) #28 ENSCLAG00000008166 #31 ENSCLAG00000017329 #30 SLFN14 (ENSCLAG00000004969) #34 PEX12 (ENSCLAG00000006085) #35 AP2B1 (ENSCLAG00000009660) #37 RASL10B (ENSCLAG00000016447) GAS2L2 (ENSCLAG00000010014) C17orf50 (ENSCLAG00000011018) MMP28 (ENSCLAG00000012449) TAF15 (ENSCLAG00000008940) Degu MODERN SPECIES 113 C17orf75 (ENSODEG00000012638) ZNF207 (ENSODEG00000012683) ENSODEG00000013615 #7 ENSODEG00000014487 #7 CDK5R1 (ENSODEG00000020159) #8 MYO1D (ENSODEG00000012420) #9 TMEM98 (ENSODEG00000012273) #10 ENSODEG00000012654 #11 ASIC2 (ENSODEG00000012964) #12 CCL11 (ENSODEG00000013280) #15 ENSODEG00000013352 TMEM132E (ENSODEG00000013225) #19 CCT6B (ENSODEG00000013365) #21 ENSODEG00000020133 ZNF830 (ENSODEG00000012121) #20 LIG3 (ENSODEG00000014335) #22 RFFL (ENSODEG00000013992) #23 RAD51D (ENSODEG00000014400) #24 NLE1 (ENSODEG00000015154) #27 UNC45B (ENSODEG00000013654) #28 ENSODEG00000020075 Guinea pig MODERN SPECIES 32 ZNF207 (ENSCPOG00000001728) PSMD11 (ENSCPOG00000009798) #7 CDK5R1 (ENSCPOG00000020676) #8 MYO1D (ENSCPOG00000000149) #9 TMEM98 (ENSCPOG00000000153) #10 SPACA3 (ENSCPOG00000027605) #11 ASIC2 (ENSCPOG00000025132) #12 ENSCPOG00000033808 ##13 ENSCPOG00000013468 ##13 CCL7 (ENSCPOG00000013035) #14 CCL11 (ENSCPOG00000032138) #15 ENSCPOG00000033402 ##13 TMEM132E (ENSCPOG00000001908) #19 CCT6B (ENSCPOG00000002794) #21 ZNF830 (ENSCPOG00000031218) #20 LIG3 (ENSCPOG00000013032) #22 RFFL (ENSCPOG00000022966) #23 RAD51D (ENSCPOG00000025259) #24 FNDC8 (ENSCPOG00000020325) #25 NLE1 (ENSCPOG00000013116) #27 UNC45B (ENSCPOG00000013117) #28 SLFN5 (ENSCPOG00000011027) #29 PEX12 (ENSCPOG00000039161) #35 ENSCPOG00000010238 #37 RASL10B (ENSCPOG00000031497) ENSCPOG00000036328 C17orf50 (ENSCPOG00000019600) MMP28 (ENSCPOG00000031764) ENSCPOG00000040326 HEATR9 (ENSCPOG00000010117) ENSCPOG00000008852 ##13 Naked mole-rat female MODERN SPECIES 12 RHOT1 (ENSHGLG00000011785) ENSHGLG00000049011 C17orf75 (ENSHGLG00000019463) ENSHGLG00000002460 ZNF207 (ENSHGLG00000019501) PSMD11 (ENSHGLG00000019505) #7 CDK5R1 (ENSHGLG00000037917) #8 MYO1D (ENSHGLG00000015796) #9 TMEM98 (ENSHGLG00000015858) #10 SPACA3 (ENSHGLG00000015911) #11 ASIC2 (ENSHGLG00000000958) #12 CCL2 (ENSHGLG00000034308) ##13 CCL11 (ENSHGLG00000001015) #15 ENSHGLG00000001025 #14 ENSHGLG00000042122 Lig3 (ENSHGLG00000001349) #22 ENSHGLG00000001734 #23 RAD51D (ENSHGLG00000001857) #24 FNDC8 (ENSHGLG00000001963) #25 NLE1 (ENSHGLG00000002006) #27 UNC45B (ENSHGLG00000002117) #28 ENSHGLG00000039133 SLFN14 (ENSHGLG00000002313) #34 ENSHGLG00000019904 PEX12 (ENSHGLG00000044826) #35 AP2B1 (ENSHGLG00000002411) #37 RASL10B (ENSHGLG00000038176) ENSHGLG00000005151 ENSHGLG00000036876 ENSHGLG00000040978 ENSHGLG00000005292 Lagomorpha ANCESTRAL SPECIES ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a.b #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.c.a ##13 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 Rabbit MODERN SPECIES 10 PSMD11 (ENSOCUG00000008495) #7 MYO1D (ENSOCUG00000008513) #9 TMEM98 (ENSOCUG00000009595) #10 SPACA3 (ENSOCUG00000010792) #11 ASIC2 (ENSOCUG00000013626) #12 ENSOCUG00000025296 CCL2 (ENSOCUG00000021710) #13 ENSOCUG00000034927 #14 CCL11 (ENSOCUG00000005935) #15 ENSOCUG00000030195 ENSOCUG00000013412 ##13 ENSOCUG00000013416 TMEM132E (ENSOCUG00000012159) #19 CCT6B (ENSOCUG00000012343) #21 ZNF830 (ENSOCUG00000012351) #20 LIG3 (ENSOCUG00000006305) #22 RFFL (ENSOCUG00000006315) #23 ENSOCUG00000014300 #24 FNDC8 (ENSOCUG00000014306) #25 NLE1 (ENSOCUG00000014310) #27 UNC45B (ENSOCUG00000026443) #28 SLFN13 (ENSOCUG00000003504) #31 SLFN14 (ENSOCUG00000006884) #34 PEX12 (ENSOCUG00000004058) #35 AP2B1 (ENSOCUG00000004060) #37 RASL10B (ENSOCUG00000004080) GAS2L2 (ENSOCUG00000004081) C17orf50 (ENSOCUG00000004084) MMP28 (ENSOCUG00000004089) TAF15 (ENSOCUG00000002838) HEATR9 (ENSOCUG00000002842) Pika MODERN SPECIES 3093 ENSOPRG00000011707 #21 LIG3 (ENSOPRG00000011746) #22 RFFL (ENSOPRG00000011769) #23 RAD51D (ENSOPRG00000011777) #24 FNDC8 (ENSOPRG00000011794) #25 NLE1 (ENSOPRG00000011799) #27 UNC45B (ENSOPRG00000011826) #28 ENSOPRG00000011856 #31 PEX12 (ENSOPRG00000011876) #35 AP2B1 (ENSOPRG00000011887) #37 RASL10B (ENSOPRG00000011920) ENSOPRG00000011930 C17orf50 (ENSOPRG00000011951) MMP28 (ENSOPRG00000011967) HEATR9 (ENSOPRG00000011985) ENSOPRG00000012010 ##13 ENSOPRG00000012019 ##13 Tree shrew MODERN SPECIES 1419 CCT6B (ENSTBEG00000002242) #21 LIG3 (ENSTBEG00000002497) #22 RFFL (ENSTBEG00000003120) #23 Laurasiatheria ANCESTRAL SPECIES 4 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 Artiodactyla ANCESTRAL SPECIES 4 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Suina ANCESTRAL SPECIES ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 Pig MODERN SPECIES 3 CDK5R1 (ENSSSCG00000017730) #8 MYO1D (ENSSSCG00000017728) #9 TMEM98 (ENSSSCG00000017727) #10 SPACA3 (ENSSSCG00000017726) #11 ASIC2 (ENSSSCG00000040177) #12 ENSSSCG00000058804 ENSSSCG00000034396 ENSSSCG00000031620 CCL2 (ENSSSCG00000017723) #13 CCL11 (ENSSSCG00000044762) #15 CCL8 (ENSSSCG00000040648) #16 CCL1 (ENSSSCG00000017720) TMEM132E (ENSSSCG00000022987) #19 CCT6B (ENSSSCG00000022196) #21 ZNF830 (ENSSSCG00000056119) #20 LIG3 (ENSSSCG00000024770) #22 RFFL (ENSSSCG00000032552) #23 RAD51D (ENSSSCG00000061966) #24 FNDC8 (ENSSSCG00000021617) #25 NLE1 (ENSSSCG00000025796) #27 UNC45B (ENSSSCG00000017717) #28 ENSSSCG00000032652 #31 SLFN14 (ENSSSCG00000031114) #34 PEX12 (ENSSSCG00000017713) #35 AP2B1 (ENSSSCG00000017712) #37 RASL10B (ENSSSCG00000036746) GAS2L2 (ENSSSCG00000039395) MMP28 (ENSSSCG00000034440) TAF15 (ENSSSCG00000017707) HEATR9 (ENSSSCG00000017706) CCL5 (ENSSSCG00000017705) ##13 Chacoan peccary MODERN SPECIES 144 C17orf75 (ENSCWAG00000013929) ZNF207 (ENSCWAG00000013991) PSMD11 (ENSCWAG00000014200) #7 CDK5R1 (ENSCWAG00000014253) #8 MYO1D (ENSCWAG00000014304) #9 TMEM98 (ENSCWAG00000014817) #10 SPACA3 (ENSCWAG00000014931) #11 ASIC2 (ENSCWAG00000015037) #12 CCL2 (ENSCWAG00000015205) #13 CCL11 (ENSCWAG00000015240) #15 CCL8 (ENSCWAG00000015268) #16 ENSCWAG00000015299 TMEM132E (ENSCWAG00000015350) #19 CCT6B (ENSCWAG00000015565) #21 ZNF830 (ENSCWAG00000015919) #20 LIG3 (ENSCWAG00000015948) #22 RFFL (ENSCWAG00000016017) #23 RAD51D (ENSCWAG00000016105) #24 FNDC8 (ENSCWAG00000016272) #25 NLE1 (ENSCWAG00000006273) #27 UNC45B (ENSCWAG00000006444) #28 ENSCWAG00000006739 #31 SLFN14 (ENSCWAG00000006953) #34 PEX12 (ENSCWAG00000007111) #35 AP2B1 (ENSCWAG00000007160) #37 RASL10B (ENSCWAG00000007260) GAS2L2 (ENSCWAG00000007285) C17orf50 (ENSCWAG00000007362) MMP28 (ENSCWAG00000007423) TAF15 (ENSCWAG00000007501) HEATR9 (ENSCWAG00000007560) Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b ##37 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 Camelidae ANCESTRAL SPECIES 46 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 Arabian camel MODERN SPECIES 7 ENSCDRG00005018176 PSMD11 (ENSCDRG00005018315) #7 CDK5R1 (ENSCDRG00005018360) #8 MYO1D (ENSCDRG00005018383) #9 TMEM98 (ENSCDRG00005018566) #10 ENSCDRG00005018607 #11 ENSCDRG00005018651 #11 ASIC2 (ENSCDRG00005018676) #12 CCL2 (ENSCDRG00005018730) #13 ENSCDRG00005018754 #15 CCL8 (ENSCDRG00005018771) #16 ENSCDRG00005018782 TMEM132E (ENSCDRG00005018809) #19 CCT6B (ENSCDRG00005018987) #21 ZNF830 (ENSCDRG00005019235) #20 LIG3 (ENSCDRG00005019260) #22 RFFL (ENSCDRG00005019298) #23 RAD51D (ENSCDRG00005008720) #24 FNDC8 (ENSCDRG00005008856) #25 NLE1 (ENSCDRG00005008920) #27 UNC45B (ENSCDRG00005009329) #28 ENSCDRG00005009987 ENSCDRG00005010031 ENSCDRG00005010071 NGFR (ENSCDRG00005010099) NXPH3 (ENSCDRG00005010150) SPOP (ENSCDRG00005010198) SLC35B1 (ENSCDRG00005010268) FAM117A (ENSCDRG00005010358) KAT7 (ENSCDRG00005010423) TAC4 (ENSCDRG00005010878) Alpaca MODERN SPECIES 392 CCT6B (ENSVPAG00000000151) #21 LIG3 (ENSVPAG00000000153) #22 ENSVPAG00000000156 #23 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Pecora ANCESTRAL SPECIES 1 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Yarkand deer MODERN SPECIES 28 PSMD11 (ENSCHYG00000005685) #7 CDK5R1 (ENSCHYG00000005666) #8 MYO1D (ENSCHYG00000005522) #9 TMEM98 (ENSCHYG00000005448) #10 SPACA3 (ENSCHYG00000005400) #11 ENSCHYG00000005385 ENSCHYG00000005365 ASIC2 (ENSCHYG00000005233) #12 CCL2 (ENSCHYG00000004987) #13 CCL11 (ENSCHYG00000004959) #15 ENSCHYG00000004663 #16 ENSCHYG00000004652 TMEM132E (ENSCHYG00000004615) #19 CCT6B (ENSCHYG00000004528) #21 ZNF830 (ENSCHYG00000004488) #20 LIG3 (ENSCHYG00000004420) #22 ENSCHYG00000004295 #24 FNDC8 (ENSCHYG00000004217) #25 NLE1 (ENSCHYG00000004131) #27 UNC45B (ENSCHYG00000004023) #28 ENSCHYG00000003986 #30 SLFN14 (ENSCHYG00000003977) #34 PEX12 (ENSCHYG00000003961) #35 ENSCHYG00000003898 ##37 RASL10B (ENSCHYG00000003865) GAS2L2 (ENSCHYG00000003847) C17orf50 (ENSCHYG00000003832) MMP28 (ENSCHYG00000003809) TAF15 (ENSCHYG00000003703) HEATR9 (ENSCHYG00000003637) ENSCHYG00000003613 ##13 Percora_a ANCESTRAL SPECIES 2 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Siberian musk deer MODERN SPECIES 1135 ZNF207 (ENSMMSG00000014169) PSMD11 (ENSMMSG00000014125) #7 CDK5R1 (ENSMMSG00000014112) #8 MYO1D (ENSMMSG00000014045) #9 TMEM98 (ENSMMSG00000013992) #10 SPACA3 (ENSMMSG00000013944) #11 ASIC2 (ENSMMSG00000013849) #12 CCL2 (ENSMMSG00000013816) #13 CCL11 (ENSMMSG00000013803) #15 CCL8 (ENSMMSG00000013783) #16 CCL1 (ENSMMSG00000013764) #18 ENSMMSG00000013748 TMEM132E (ENSMMSG00000013674) #19 CCT6B (ENSMMSG00000013474) #21 ZNF830 (ENSMMSG00000013439) #20 LIG3 (ENSMMSG00000013344) #22 RFFL (ENSMMSG00000013303) #23 ENSMMSG00000013244 #24 FNDC8 (ENSMMSG00000013206) #25 NLE1 (ENSMMSG00000013105) #27 UNC45B (ENSMMSG00000012816) #28 ENSMMSG00000012754 #30 ENSMMSG00000012719 #31 SLFN14 (ENSMMSG00000012689) #34 PEX12 (ENSMMSG00000012661) #35 ENSMMSG00000012554 ##37 RASL10B (ENSMMSG00000012523) GAS2L2 (ENSMMSG00000012477) C17orf50 (ENSMMSG00000012439) MMP28 (ENSMMSG00000012400) TAF15 (ENSMMSG00000012333) Bovidae ANCESTRAL SPECIES 2 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Bovinae ANCESTRAL SPECIES ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Bos ANCESTRAL SPECIES 1 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Bos_a ANCESTRAL SPECIES ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Domestic yak MODERN SPECIES 10 ZNF207 (ENSBGRG00000018994) ENSBGRG00000019374 PSMD11 (ENSBGRG00000019390) #7 CDK5R1 (ENSBGRG00000019524) #8 MYO1D (ENSBGRG00000019568) #9 TMEM98 (ENSBGRG00000019780) #10 ENSBGRG00000019895 #11 ASIC2 (ENSBGRG00000019964) #12 ENSBGRG00000020251 #13 CCL11 (ENSBGRG00000020299) #15 ENSBGRG00000020373 #16 ENSBGRG00000020420 TMEM132E (ENSBGRG00000020451) #19 CCT6B (ENSBGRG00000020692) #21 ZNF830 (ENSBGRG00000021136) #20 LIG3 (ENSBGRG00000021180) #22 RFFL (ENSBGRG00000021399) #23 ENSBGRG00000021490 #24 FNDC8 (ENSBGRG00000021652) #25 NLE1 (ENSBGRG00000021708) #27 UNC45B (ENSBGRG00000022051) #28 ENSBGRG00000022720 #30 ENSBGRG00000022760 #31 SLFN14 (ENSBGRG00000022772) #34 PEX12 (ENSBGRG00000022808) #35 ENSBGRG00000022860 ##37 RASL10B (ENSBGRG00000023043) GAS2L2 (ENSBGRG00000023089) C17orf50 (ENSBGRG00000023233) MMP28 (ENSBGRG00000023311) ENSBGRG00000023398 Wild yak MODERN SPECIES 1117 ENSBMUG00000013556 ##12 CCL2 (ENSBMUG00000013532) #13 CCL11 (ENSBMUG00000013523) #15 ENSBMUG00000013512 #16 CCL1 (ENSBMUG00000013488) #18 TMEM132E (ENSBMUG00000013479) #19 CCT6B (ENSBMUG00000013437) #21 ZNF830 (ENSBMUG00000013328) #20 LIG3 (ENSBMUG00000013309) #22 RFFL (ENSBMUG00000013239) #23 RAD51D (ENSBMUG00000013181) #24 FNDC8 (ENSBMUG00000013103) #25 NLE1 (ENSBMUG00000013085) #27 UNC45B (ENSBMUG00000013040) #28 ENSBMUG00000012916 #30 ENSBMUG00000012900 #31 SLFN14 (ENSBMUG00000012865) #34 PEX12 (ENSBMUG00000012839) #35 ENSBMUG00000012814 ##37 RASL10B (ENSBMUG00000012740) ENSBMUG00000012734 ENSBMUG00000012720 C17orf50 (ENSBMUG00000012713) ENSBMUG00000012696 Bos_b ANCESTRAL SPECIES 38 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT01100000263480.a.b.a.b.b.b.b.a.a ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 Cow MODERN SPECIES 10 C19H17orf75 (ENSBTAG00000020994) ZNF207 (ENSBTAG00000008883) PSMD11 (ENSBTAG00000018897) #7 CDK5R1 (ENSBTAG00000004475) #8 MYO1D (ENSBTAG00000015527) #9 TMEM98 (ENSBTAG00000008913) #10 SPACA3 (ENSBTAG00000000344) #11 ASIC2 (ENSBTAG00000025200) #12 CCL2 (ENSBTAG00000037811) #13 CCL11 (ENSBTAG00000004129) #15 CCL8 (ENSBTAG00000014113) #16 CCL1 (ENSBTAG00000008832) TMEM132E (ENSBTAG00000002680) #19 CCT6B (ENSBTAG00000020338) #21 ZNF830 (ENSBTAG00000020340) #20 LIG3 (ENSBTAG00000018689) #22 RFFL (ENSBTAG00000013645) #23 RAD51D (ENSBTAG00000019082) #24 FNDC8 (ENSBTAG00000019092) #25 NLE1 (ENSBTAG00000019094) #27 UNC45B (ENSBTAG00000002898) #28 ENSBTAG00000025219 #30 ENSBTAG00000051396 ENSBTAG00000019437 #31 SLFN14 (ENSBTAG00000039206) #34 PEX12 (ENSBTAG00000019723) #35 AP2B1 (ENSBTAG00000020316) ##37 RASL10B (ENSBTAG00000018518) GAS2L2 (ENSBTAG00000018519) C19H17orf50 (ENSBTAG00000045621) MMP28 (ENSBTAG00000006086) Hybrid Bos Indicus MODERN SPECIES 10 ZNF207 (ENSBIXG00005019493) ENSBIXG00005019526 PSMD11 (ENSBIXG00005019559) #7 CDK5R1 (ENSBIXG00005019571) #8 MYO1D (ENSBIXG00005019665) #9 TMEM98 (ENSBIXG00005019737) #10 ENSBIXG00005019792 #11 ASIC2 (ENSBIXG00005006881) #12 CCL2 (ENSBIXG00005006654) #13 CCL11 (ENSBIXG00005003267) #15 ENSBIXG00005019984 #16 ENSBIXG00005003275 TMEM132E (ENSBIXG00005003295) #19 CCT6B (ENSBIXG00005020356) #21 ZNF830 (ENSBIXG00005000019) #20 LIG3 (ENSBIXG00005020425) #22 RFFL (ENSBIXG00005020511) #23 RAD51D (ENSBIXG00005007727) #24 FNDC8 (ENSBIXG00005020624) #25 NLE1 (ENSBIXG00005020696) #27 UNC45B (ENSBIXG00005020949) #28 ENSBIXG00005003547 #30 ENSBIXG00005021013 ENSBIXG00005021034 #31 SLFN14 (ENSBIXG00005021050) #34 PEX12 (ENSBIXG00005021083) #35 ENSBIXG00005021182 ##37 RASL10B (ENSBIXG00005021225) GAS2L2 (ENSBIXG00005021333) C17orf50 (ENSBIXG00005007305) MMP28 (ENSBIXG00005021408) American bison MODERN SPECIES 3331 RHBDL3 (ENSBBBG00000016033) C17orf75 (ENSBBBG00000016016) ZNF207 (ENSBBBG00000003982) PSMD11 (ENSBBBG00000015842) #7 CDK5R1 (ENSBBBG00000015765) #8 MYO1D (ENSBBBG00000015737) #9 TMEM98 (ENSBBBG00000015612) #10 SPACA3 (ENSBBBG00000003890) #11 ASIC2 (ENSBBBG00000000789) #12 CCL2 (ENSBBBG00000015537) #13 CCL11 (ENSBBBG00000015529) #15 ENSBBBG00000015515 #16 TMEM132E (ENSBBBG00000003856) #19 CCT6B (ENSBBBG00000015432) #21 ZNF830 (ENSBBBG00000003814) #20 LIG3 (ENSBBBG00000003485) #22 RFFL (ENSBBBG00000001330) #23 RAD51D (ENSBBBG00000015308) #24 FNDC8 (ENSBBBG00000015233) #25 NLE1 (ENSBBBG00000003521) #27 UNC45B (ENSBBBG00000003753) #28 ENSBBBG00000000800 #30 ENSBBBG00000015007 #31 SLFN14 (ENSBBBG00000003718) #34 PEX12 (ENSBBBG00000014984) #35 ENSBBBG00000014960 ##37 RASL10B (ENSBBBG00000000919) GAS2L2 (ENSBBBG00000000929) MMP28 (ENSBBBG00000000966) TAF15 (ENSBBBG00000000998) HEATR9 (ENSBBBG00000001077) Caprinae ANCESTRAL SPECIES 1 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095.c.a #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.c.b.a ##37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 Rambouillet Sheep MODERN SPECIES 2 ZNF207 (ENSOARG00020013074) PSMD11 (ENSOARG00020013882) #7 CDK5R1 (ENSOARG00020014060) #8 MYO1D (ENSOARG00020014169) #9 RPS26 (ENSOARG00020016985) TMEM98 (ENSOARG00020017022) #10 SPACA3 (ENSOARG00020017184) #11 ASIC2 (ENSOARG00020017317) #12 CCL2 (ENSOARG00020017573) #13 CCL11 (ENSOARG00020017624) #15 CCL8 (ENSOARG00020017661) #16 CCL1 (ENSOARG00020017691) #18 TMEM132E (ENSOARG00020017730) #19 CCT6B (ENSOARG00020018028) #21 ZNF830 (ENSOARG00020018540) #20 LIG3 (ENSOARG00020018561) #22 RFFL (ENSOARG00020018710) #23 ENSOARG00020018814 #24 FNDC8 (ENSOARG00020018903) #25 ENSOARG00020018949 #27 ENSOARG00020018986 #27 UNC45B (ENSOARG00020019061) #28 ENSOARG00020019677 ENSOARG00020019723 #30 SLFN14 (ENSOARG00020019977) #34 PEX12 (ENSOARG00020020025) #35 AP2B1 (ENSOARG00020020066) ##37 ENSOARG00020020386 RASL10B (ENSOARG00020020400) C17orf50 (ENSOARG00020020706) MMP28 (ENSOARG00020020795) Goat MODERN SPECIES 10 ZNF207 (ENSCHIG00000013026) PSMD11 (ENSCHIG00000008139) #7 CDK5R1 (ENSCHIG00000004376) #8 MYO1D (ENSCHIG00000014922) #9 TMEM98 (ENSCHIG00000027044) #10 SPACA3 (ENSCHIG00000014732) #11 ASIC2 (ENSCHIG00000026032) #12 ENSCHIG00000014289 ##12 CCL2 (ENSCHIG00000023567) #13 CCL11 (ENSCHIG00000012968) #15 CCL8 (ENSCHIG00000020074) #16 ENSCHIG00000002408 TMEM132E (ENSCHIG00000015468) #19 CCT6B (ENSCHIG00000023739) #21 ZNF830 (ENSCHIG00000012740) #20 LIG3 (ENSCHIG00000023884) #22 RFFL (ENSCHIG00000012667) #23 ENSCHIG00000019605 #24 FNDC8 (ENSCHIG00000027164) #25 NLE1 (ENSCHIG00000012536) #27 UNC45B (ENSCHIG00000018294) #28 ENSCHIG00000026701 #31 SLFN14 (ENSCHIG00000026874) #34 PEX12 (ENSCHIG00000025650) #35 ENSCHIG00000019283 ##37 RASL10B (ENSCHIG00000018183) GAS2L2 (ENSCHIG00000026688) C17orf50 (ENSCHIG00000018412) MMP28 (ENSCHIG00000027070) ENSCHIG00000027235 HEATR9 (ENSCHIG00000021394) Cetacea ANCESTRAL SPECIES 5 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Odontoceti ANCESTRAL SPECIES 17 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Odontoceti_a ANCESTRAL SPECIES 18 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209.f #35 ENSGT00940000155206.c.a ##37 Odontoceti_b ANCESTRAL SPECIES 20 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT01010000228931 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209.f #35 ENSGT00940000155206.c.a ##37 Monodontidae ANCESTRAL SPECIES 21 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT01010000228931 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209.f #35 Beluga whale MODERN SPECIES 117 FGF11 (ENSDLEG00000018046) ENSDLEG00000018053 TMEM132E (ENSDLEG00000018074) #19 ENSDLEG00000018084 ENSDLEG00000018092 ZNF830 (ENSDLEG00000018101) #20 LIG3 (ENSDLEG00000018120) #22 RFFL (ENSDLEG00000018150) #23 RAD51D (ENSDLEG00000018178) #24 FNDC8 (ENSDLEG00000018193) #25 NLE1 (ENSDLEG00000018206) #27 UNC45B (ENSDLEG00000018224) #28 ENSDLEG00000018247 #30 ENSDLEG00000018271 #31 SLFN14 (ENSDLEG00000018343) #34 Narwhal MODERN SPECIES 316 CDK5R1 (ENSMMNG00015021171) #8 MYO1D (ENSMMNG00015021191) #9 TMEM98 (ENSMMNG00015021221) #10 SPACA3 (ENSMMNG00015021243) #11 ASIC2 (ENSMMNG00015021265) #12 CCL2 (ENSMMNG00015021287) #13 ENSMMNG00015021298 CCL11 (ENSMMNG00015021303) #15 CCL8 (ENSMMNG00015021312) #16 ENSMMNG00015021318 #17 CCL1 (ENSMMNG00015021332) #18 TMEM132E (ENSMMNG00015021348) #19 ENSMMNG00015021366 ENSMMNG00015015650 ZNF830 (ENSMMNG00015015663) #20 LIG3 (ENSMMNG00015015691) #22 RFFL (ENSMMNG00015015776) #23 RAD51D (ENSMMNG00015015851) #24 FNDC8 (ENSMMNG00015015917) #25 NLE1 (ENSMMNG00015015965) #27 UNC45B (ENSMMNG00015016104) #28 ENSMMNG00015016251 #30 ENSMMNG00015016293 #31 SLFN14 (ENSMMNG00015016335) #34 PEX12 (ENSMMNG00015016360) #35 Vaquita MODERN SPECIES 12 MMD (ENSPSNG00000012484) HLF (ENSPSNG00000012389) STXBP4 (ENSPSNG00000012300) ENSPSNG00000012227 ENSPSNG00000012124 GPS2 (ENSPSNG00000012090) ENSPSNG00000012037 ENSPSNG00000011980 CA10 (ENSPSNG00000011791) ENSPSNG00000011630 TMEM132E (ENSPSNG00000011353) #19 ENSPSNG00000011280 ENSPSNG00000011250 ENSPSNG00000011220 ZNF830 (ENSPSNG00000011195) #20 LIG3 (ENSPSNG00000011102) #22 RFFL (ENSPSNG00000010922) #23 RAD51D (ENSPSNG00000010752) #24 FNDC8 (ENSPSNG00000010677) #25 NLE1 (ENSPSNG00000010570) #27 UNC45B (ENSPSNG00000010204) #28 ENSPSNG00000010100 #30 ENSPSNG00000010053 #30 SLFN14 (ENSPSNG00000009991) #34 ENSPSNG00000009938 #35 ENSPSNG00000009891 ENSPSNG00000009744 ENSPSNG00000009692 ENSPSNG00000009606 #35 ENSPSNG00000009585 ##37 ENSPSNG00000022370 Dolphin MODERN SPECIES 320 CCT6B (ENSTTRG00000015442) #21 ZNF830 (ENSTTRG00000015462) #20 LIG3 (ENSTTRG00000015470) #22 RFFL (ENSTTRG00000015494) #23 RAD51D (ENSTTRG00000015503) #24 FNDC8 (ENSTTRG00000015515) #25 NLE1 (ENSTTRG00000015519) #27 UNC45B (ENSTTRG00000015528) #28 Sperm whale MODERN SPECIES 5 PSMD11 (ENSPCTG00005011616) #7 CDK5R1 (ENSPCTG00005011765) #8 MYO1D (ENSPCTG00005011821) #9 TMEM98 (ENSPCTG00005012148) #10 SPACA3 (ENSPCTG00005012213) #11 ASIC2 (ENSPCTG00005012341) #12 CCL2 (ENSPCTG00005012569) #13 CCL11 (ENSPCTG00005012625) #15 ENSPCTG00005012666 CCL13 (ENSPCTG00005012690) #17 CCL1 (ENSPCTG00005012728) TMEM132E (ENSPCTG00005012754) #19 ENSPCTG00005012970 ENSPCTG00005013032 ENSPCTG00005013042 #21 LIG3 (ENSPCTG00005013330) #22 RFFL (ENSPCTG00005013449) #23 ENSPCTG00005013530 ENSPCTG00005013587 #24 ENSPCTG00005013754 SLFN12 (ENSPCTG00005013784) #30 SLFN11 (ENSPCTG00005013804) #31 SLFN14 (ENSPCTG00005013867) #34 ENSPCTG00005013925 PEX12 (ENSPCTG00005013981) #35 AP2B1 (ENSPCTG00005014049) #37 RASL10B (ENSPCTG00005014172) GAS2L2 (ENSPCTG00005014226) ENSPCTG00005014431 C17orf50 (ENSPCTG00005014470) MMP28 (ENSPCTG00005014601) Blue whale MODERN SPECIES 12 ZNF207 (ENSBMSG00010015813) PSMD11 (ENSBMSG00010015716) #7 CDK5R1 (ENSBMSG00010015699) #8 MYO1D (ENSBMSG00010015533) #9 TMEM98 (ENSBMSG00010015458) #10 SPACA3 (ENSBMSG00010015398) #11 ASIC2 (ENSBMSG00010015290) #12 CCL2 (ENSBMSG00010015239) #13 CCL7 (ENSBMSG00010015213) #14 CCL11 (ENSBMSG00010015194) #15 CCL8 (ENSBMSG00010015171) #16 CCL1 (ENSBMSG00010015132) #18 TMEM132E (ENSBMSG00010015019) #19 ENSBMSG00010014985 ZNF830 (ENSBMSG00010014976) #20 LIG3 (ENSBMSG00010014942) #22 RFFL (ENSBMSG00010014852) #23 RAD51D (ENSBMSG00010014782) #24 FNDC8 (ENSBMSG00010014750) #25 NLE1 (ENSBMSG00010014584) #27 UNC45B (ENSBMSG00010014269) #28 ENSBMSG00010014205 #30 ENSBMSG00010014181 #31 SLFN14 (ENSBMSG00010014153) #34 PEX12 (ENSBMSG00010014124) #35 ENSBMSG00010014086 AP2B1 (ENSBMSG00010014021) #37 RASL10B (ENSBMSG00010013977) GAS2L2 (ENSBMSG00010013934) C17orf50 (ENSBMSG00010013900) MMP28 (ENSBMSG00010013863) Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 Carnivora ANCESTRAL SPECIES 9 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Felidae ANCESTRAL SPECIES 8 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479.i #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Panthera ANCESTRAL SPECIES 14 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01040000242096 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479.i #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Panthera_a ANCESTRAL SPECIES 13 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01040000242096 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479.i #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 leopard MODERN SPECIES 96 ZNF207 (ENSPPRG00000001689) PSMD11 (ENSPPRG00000023389) #7 CDK5R1 (ENSPPRG00000017589) #8 MYO1D (ENSPPRG00000024181) #9 TMEM98 (ENSPPRG00000014217) #10 SPACA3 (ENSPPRG00000013306) #11 ASIC2 (ENSPPRG00000011981) #12 ENSPPRG00000009983 ENSPPRG00000009828 CCL8 (ENSPPRG00000009741) #16 CCL13 (ENSPPRG00000009433) #17 ENSPPRG00000008979 TMEM132E (ENSPPRG00000008656) #19 CCT6B (ENSPPRG00000007926) #21 ZNF830 (ENSPPRG00000017044) #20 LIG3 (ENSPPRG00000005157) #22 RFFL (ENSPPRG00000003045) #23 RAD51D (ENSPPRG00000001417) #24 FNDC8 (ENSPPRG00000000094) #25 NLE1 (ENSPPRG00000022096) #27 UNC45B (ENSPPRG00000014849) #28 SLFN5 (ENSPPRG00000010973) #29 PEX12 (ENSPPRG00000008251) #35 AP2B1 (ENSPPRG00000007979) #37 RASL10B (ENSPPRG00000006126) ENSPPRG00000005858 C17orf50 (ENSPPRG00000005525) MMP28 (ENSPPRG00000004296) TAF15 (ENSPPRG00000003286) HEATR9 (ENSPPRG00000001679) ENSPPRG00000022842 ##13 lion MODERN SPECIES 14 PSMD11 (ENSPLOG00000015536) #7 CDK5R1 (ENSPLOG00000015588) #8 MYO1D (ENSPLOG00000015637) #9 TMEM98 (ENSPLOG00000015789) #10 SPACA3 (ENSPLOG00000015896) #11 ASIC2 (ENSPLOG00000015956) #12 ENSPLOG00000016136 CCL2 (ENSPLOG00000016154) #13 ENSPLOG00000016184 CCL8 (ENSPLOG00000008313) #16 CCL13 (ENSPLOG00000008357) #17 ENSPLOG00000008391 TMEM132E (ENSPLOG00000008445) #19 CCT6B (ENSPLOG00000008659) #21 ZNF830 (ENSPLOG00000009023) #20 LIG3 (ENSPLOG00000009223) #22 RFFL (ENSPLOG00000009495) #23 RAD51D (ENSPLOG00000009565) #24 FNDC8 (ENSPLOG00000009631) #25 NLE1 (ENSPLOG00000009702) #27 UNC45B (ENSPLOG00000009892) #28 ENSPLOG00000010300 MAP2K3 (ENSPLOG00000010345) ENSPLOG00000010462 TMEM11 (ENSPLOG00000010503) DHRS7B (ENSPLOG00000010536) USP22 (ENSPLOG00000010575) TNFRSF13B (ENSPLOG00000010669) ENSPLOG00000010740 PLD6 (ENSPLOG00000010926) FLCN (ENSPLOG00000010959) Tiger MODERN SPECIES 518 ENSPTIG00000019896 ENSPTIG00000019894 CCL8 (ENSPTIG00000019874) #16 CCL13 (ENSPTIG00000019853) #17 ENSPTIG00000019795 TMEM132E (ENSPTIG00000019584) #19 CCT6B (ENSPTIG00000019230) #21 ZNF830 (ENSPTIG00000009775) #20 LIG3 (ENSPTIG00000019055) #22 RFFL (ENSPTIG00000018905) #23 RAD51D (ENSPTIG00000018745) #24 FNDC8 (ENSPTIG00000018278) #25 NLE1 (ENSPTIG00000018083) #27 UNC45B (ENSPTIG00000017835) #28 SLFN5 (ENSPTIG00000017726) #29 PEX12 (ENSPTIG00000017661) #35 AP2B1 (ENSPTIG00000017111) #37 RASL10B (ENSPTIG00000016870) GAS2L2 (ENSPTIG00000016863) ENSPTIG00000016834 MMP28 (ENSPTIG00000016715) TAF15 (ENSPTIG00000016445) HEATR9 (ENSPTIG00000016190) ENSPTIG00000015882 ##13 Cat MODERN SPECIES 245 ZNF207 (ENSFCAG00000015387) ENSFCAG00000028860 PSMD11 (ENSFCAG00000002060) #7 CDK5R1 (ENSFCAG00000008545) #8 MYO1D (ENSFCAG00000012420) #9 TMEM98 (ENSFCAG00000000912) #10 SPACA3 (ENSFCAG00000000913) #11 ASIC2 (ENSFCAG00000018329) #12 CCL2 (ENSFCAG00000038488) #13 CCL7 (ENSFCAG00000045217) #14 CCL8 (ENSFCAG00000013594) #16 CCL13 (ENSFCAG00000026454) #17 ENSFCAG00000032743 TMEM132E (ENSFCAG00000022991) #19 CCT6B (ENSFCAG00000022789) #21 LIG3 (ENSFCAG00000000249) #22 RFFL (ENSFCAG00000000250) #23 RAD51D (ENSFCAG00000027426) #24 FNDC8 (ENSFCAG00000000252) #25 NLE1 (ENSFCAG00000000253) #27 UNC45B (ENSFCAG00000000254) #28 SLFN5 (ENSFCAG00000000255) #29 PEX12 (ENSFCAG00000010389) #35 AP2B1 (ENSFCAG00000010390) #37 RASL10B (ENSFCAG00000032700) GAS2L2 (ENSFCAG00000033656) CE1H17orf50 (ENSFCAG00000033141) MMP28 (ENSFCAG00000010393) TAF15 (ENSFCAG00000018167) HEATR9 (ENSFCAG00000002003) CCL5 (ENSFCAG00000001259) ##13 Caniformia ANCESTRAL SPECIES 6 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Canidae ANCESTRAL SPECIES 2 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00980000203160 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Dingo MODERN SPECIES 150 MYO1D (ENSCAFG00020014232) #9 TMEM98 (ENSCAFG00020014224) #10 ENSCAFG00020014220 #11 ASIC2 (ENSCAFG00020014212) #12 ENSCAFG00020014208 ENSCAFG00020014206 #13 CCL7 (ENSCAFG00020014205) #14 CCL8 (ENSCAFG00020014202) #16 CCL13 (ENSCAFG00020014200) #17 ENSCAFG00020014197 #18 TMEM132E (ENSCAFG00020014170) #19 ENSCAFG00020014164 ENSCAFG00020014162 CCT6B (ENSCAFG00020014065) #21 ZNF830 (ENSCAFG00020014057) #20 LIG3 (ENSCAFG00020014031) #22 RFFL (ENSCAFG00020014028) #23 ENSCAFG00020014019 #24 FNDC8 (ENSCAFG00020014010) #25 NLE1 (ENSCAFG00020014001) #27 UNC45B (ENSCAFG00020013977) #28 ENSCAFG00020013972 #29 ENSCAFG00020013969 ENSCAFG00020013962 SLFN14 (ENSCAFG00020013927) #34 PEX12 (ENSCAFG00020013920) #35 AP2B1 (ENSCAFG00020004407) #37 RASL10B (ENSCAFG00020004082) ENSCAFG00020004079 ENSCAFG00020004077 C17orf50 (ENSCAFG00020004064) Dog MODERN SPECIES 37 ZNF207 (ENSCAFG00845012267) PSMD11 (ENSCAFG00845012106) #7 CDK5R1 (ENSCAFG00845012076) #8 MYO1D (ENSCAFG00845011784) #9 TMEM98 (ENSCAFG00845011666) #10 SPACA3 (ENSCAFG00845011594) #11 ASIC2 (ENSCAFG00845011475) #12 CCL2 (ENSCAFG00845011375) #13 CCL8 (ENSCAFG00845011338) #16 CCL1 (ENSCAFG00845011240) CCL13 (ENSCAFG00845011162) #17 TMEM132E (ENSCAFG00845011068) #19 ENSCAFG00845011012 CCT6B (ENSCAFG00845010909) #21 ZNF830 (ENSCAFG00845010855) #20 LIG3 (ENSCAFG00845010737) #22 RFFL (ENSCAFG00845010579) #24 FNDC8 (ENSCAFG00845010495) #25 RFFL (ENSCAFG00845010302) #27 UNC45B (ENSCAFG00845010061) #28 ENSCAFG00845010008 #29 ENSCAFG00845009985 ENSCAFG00845009945 SLFN14 (ENSCAFG00845009886) #34 ENSCAFG00845009840 PEX12 (ENSCAFG00845009799) #35 AP2B1 (ENSCAFG00845009662) #37 RASL10B (ENSCAFG00845009585) GAS2L2 (ENSCAFG00845009497) C17orf50 (ENSCAFG00845009445) MMP28 (ENSCAFG00845009411) Red fox MODERN SPECIES 20 ZNF207 (ENSVVUG00000020618) PSMD11 (ENSVVUG00000020613) #7 CDK5R1 (ENSVVUG00000020611) #8 MYO1D (ENSVVUG00000020589) #9 TMEM98 (ENSVVUG00000020587) #10 SPACA3 (ENSVVUG00000020586) #11 ASIC2 (ENSVVUG00000020562) #12 ENSVVUG00000020545 ##12 CCL2 (ENSVVUG00000020543) #13 CCL8 (ENSVVUG00000020542) #16 ENSVVUG00000020541 #17 CCL1 (ENSVVUG00000020540) #18 TMEM132E (ENSVVUG00000020524) #19 CCT6B (ENSVVUG00000020499) #21 ZNF830 (ENSVVUG00000020495) #20 LIG3 (ENSVVUG00000020483) #22 RFFL (ENSVVUG00000020476) #23 RAD51D (ENSVVUG00000020463) #24 FNDC8 (ENSVVUG00000020460) #25 NLE1 (ENSVVUG00000020437) #27 UNC45B (ENSVVUG00000020428) #28 SLFN14 (ENSVVUG00000020422) #34 PEX12 (ENSVVUG00000020416) #35 AP2B1 (ENSVVUG00000020403) #37 RASL10B (ENSVVUG00000020398) GAS2L2 (ENSVVUG00000020397) ENSVVUG00000020395 C17orf50 (ENSVVUG00000020393) MMP28 (ENSVVUG00000020380) TAF15 (ENSVVUG00000020375) HEATR9 (ENSVVUG00000020369) Caniformia_b ANCESTRAL SPECIES 21 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Ursidae ANCESTRAL SPECIES 18 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Ursus ANCESTRAL SPECIES 8 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00940000153112.E.f.b.c.b ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Polar bear MODERN SPECIES 192 PSMD11 (ENSUMAG00000015400) #7 CDK5R1 (ENSUMAG00000015534) #8 MYO1D (ENSUMAG00000015550) #9 ENSUMAG00000015571 TMEM98 (ENSUMAG00000015573) #10 ENSUMAG00000015581 #11 ASIC2 (ENSUMAG00000015591) #12 ENSUMAG00000015601 ##12 CCL2 (ENSUMAG00000015604) #13 CCL7 (ENSUMAG00000015608) #14 CCL8 (ENSUMAG00000015612) #16 CCL13 (ENSUMAG00000015615) #17 ENSUMAG00000015623 CCT6B (ENSUMAG00000015641) #21 ZNF830 (ENSUMAG00000015731) #20 LIG3 (ENSUMAG00000015895) #22 RFFL (ENSUMAG00000016713) #23 RAD51D (ENSUMAG00000016723) #24 FNDC8 (ENSUMAG00000016726) #25 NLE1 (ENSUMAG00000016727) #27 UNC45B (ENSUMAG00000016733) #28 ENSUMAG00000016792 #29 ENSUMAG00000016794 #29 ENSUMAG00000016797 #30 SLFN14 (ENSUMAG00000016804) #34 PEX12 (ENSUMAG00000016839) #35 AP2B1 (ENSUMAG00000016846) #37 GAS2L2 (ENSUMAG00000016854) TAF15 (ENSUMAG00000016876) HEATR9 (ENSUMAG00000016881) ENSUMAG00000016895 ##13 American black bear MODERN SPECIES 4030 LIG3 (ENSUAMG00000022474) #22 RFFL (ENSUAMG00000022450) #23 ENSUAMG00000022398 #24 Giant Panda MODERN SPECIES 4 ZNF207 (ENSAMEG00000005671) PSMD11 (ENSAMEG00000005693) #7 CDK5R1 (ENSAMEG00000019817) #8 MYO1D (ENSAMEG00000005735) #9 TMEM98 (ENSAMEG00000026035) #10 SPACA3 (ENSAMEG00000005761) #11 ASIC2 (ENSAMEG00000005774) #12 ENSAMEG00000025929 #13 CCL7 (ENSAMEG00000028962) #14 CCL8 (ENSAMEG00000029965) #16 CCL13 (ENSAMEG00000023685) #17 CCL1 (ENSAMEG00000005795) #18 TMEM132E (ENSAMEG00000014409) #19 CCT6B (ENSAMEG00000014473) #21 ZNF830 (ENSAMEG00000019495) #20 LIG3 (ENSAMEG00000014509) #22 RFFL (ENSAMEG00000014564) #23 RAD51D (ENSAMEG00000014577) #24 FNDC8 (ENSAMEG00000014606) #25 NLE1 (ENSAMEG00000014614) #27 UNC45B (ENSAMEG00000014637) #28 SLFN5 (ENSAMEG00000014706) #29 ENSAMEG00000014720 #30 SLFN14 (ENSAMEG00000014725) #34 PEX12 (ENSAMEG00000014739) #35 AP2B1 (ENSAMEG00000014745) #37 GAS2L2 (ENSAMEG00000014830) RASL10B (ENSAMEG00000014822) C17orf50 (ENSAMEG00000027935) MMP28 (ENSAMEG00000014834) ENSAMEG00000014860 Mustelinae DUPLICATION Mustelinae ANCESTRAL SPECIES 2 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01100000263482.F #18 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492.c #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 ENSGT01100000263482.D ##13 American mink MODERN SPECIES 37 ZNF207 (ENSNVIG00000019388) PSMD11 (ENSNVIG00000019522) #7 CD5R1 (ENSNVIG00000019539) #8 MYO1D (ENSNVIG00000019549) #9 TMM98 (ENSNVIG00000019571) #10 SPACA3 (ENSNVIG00000019598) #11 ASIC2 (ENSNVIG00000019610) #12 CCL2 (ENSNVIG00000019643) #13 ENSNVIG00000019653 CCL8 (ENSNVIG00000019665) #16 CCL13 (ENSNVIG00000019676) #17 CCL1 (ENSNVIG00000019684) #18 TMEM132E (ENSNVIG00000019694) #19 CCT6B (ENSNVIG00000019712) #21 ZNF830 (ENSNVIG00000019817) #20 LIG3 (ENSNVIG00000019831) #22 RFFL (ENSNVIG00000019960) #23 RAD51D (ENSNVIG00000020004) #24 FNDC8 (ENSNVIG00000020043) #25 NLE1 (ENSNVIG00000020060) #27 UNC45B (ENSNVIG00000020104) #28 SLFN14 (ENSNVIG00000020175) #34 PEX12 (ENSNVIG00000020190) #35 ENSNVIG00000020204 #37 RSLAB (ENSNVIG00000020253) GAS2L2 (ENSNVIG00000020273) C17orf50 (ENSNVIG00000020299) MMP28 (ENSNVIG00000020319) TAF15 (ENSNVIG00000020344) HEATR9 (ENSNVIG00000020408) CCL5 (ENSNVIG00000020449) ##13 Ferret MODERN SPECIES 181 TMEM98 (ENSMPUG00000014780) #10 SPACA3 (ENSMPUG00000014796) #11 ASIC2 (ENSMPUG00000014834) #12 ENSMPUG00000014838 ENSMPUG00000014840 CCL2 (ENSMPUG00000014841) #13 CCL7 (ENSMPUG00000014843) #14 CCL8 (ENSMPUG00000014845) #16 CCL13 (ENSMPUG00000014846) #17 ENSMPUG00000014849 TMEM132E (ENSMPUG00000014852) #19 ENSMPUG00000014853 CCT6B (ENSMPUG00000014856) #21 ZNF830 (ENSMPUG00000019518) #20 ENSMPUG00000019522 ENSMPUG00000014859 #22 RFFL (ENSMPUG00000014861) #23 ENSMPUG00000014877 RAD51D (ENSMPUG00000014878) #24 FNDC8 (ENSMPUG00000014880) #25 NLE1 (ENSMPUG00000014893) #27 UNC45B (ENSMPUG00000014896) #28 SLFN14 (ENSMPUG00000014899) #34 PEX12 (ENSMPUG00000014908) #35 AP2B1 (ENSMPUG00000014910) #37 RASL10B (ENSMPUG00000014916) GAS2L2 (ENSMPUG00000014920) MMP28 (ENSMPUG00000014927) TAF15 (ENSMPUG00000014948) HEATR9 (ENSMPUG00000014952) ENSMPUG00000014962 ##13 Mustelinae ANCESTRAL SPECIES ENSGT00940000156492.d #22 Ferret MODERN SPECIES 242 SIDT1 (ENSMPUG00000000291) USF3 (ENSMPUG00000000290) NAA50 (ENSMPUG00000000288) ATP6V1A (ENSMPUG00000000286) GRAMD1C (ENSMPUG00000000284) ZDHHC23 (ENSMPUG00000000282) CCDC191 (ENSMPUG00000000280) QTRT2 (ENSMPUG00000000279) DRD3 (ENSMPUG00000000277) ENSMPUG00000000275 TIGIT (ENSMPUG00000000274) ZBTB20 (ENSMPUG00000000272) GAP43 (ENSMPUG00000000271) LSAMP (ENSMPUG00000000269) ENSMPUG00000000264 ENSMPUG00000000262 #22 ENSMPUG00000018922 ENSMPUG00000000261 IGSF11 (ENSMPUG00000000260) ENSMPUG00000000259 UPK1B (ENSMPUG00000000258) B4GALT4 (ENSMPUG00000000257) ENSMPUG00000000254 Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00390000003008 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Equus ANCESTRAL SPECIES ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.a.b #16 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a.b #31 ENSGT00410000025651.A.b.a.a.b #30 ENSGT00410000025651.A.b.a.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 Donkey MODERN SPECIES 4 MYO1D (ENSEASG00005010913) #9 TMEM98 (ENSEASG00005010917) #10 SPACA3 (ENSEASG00005010921) #11 ASIC2 (ENSEASG00005010930) #12 ENSEASG00005001865 ENSEASG00005035074 CCL2 (ENSEASG00005026206) #13 CCL7 (ENSEASG00005028946) #14 CCL11 (ENSEASG00005029284) #15 CCL8 (ENSEASG00005028357) #16 ENSEASG00005033288 #17 ENSEASG00005036948 TMEM132E (ENSEASG00005010955) #19 CCT6B (ENSEASG00005010982) #21 ZNF830 (ENSEASG00005011187) #20 LIG3 (ENSEASG00005011191) #22 RFFL (ENSEASG00005011194) #23 RAD51D (ENSEASG00005011196) #24 FNDC8 (ENSEASG00005011197) #25 NLE1 (ENSEASG00005011199) #27 UNC45B (ENSEASG00005011201) #28 SLFN5 (ENSEASG00005011202) #29 ENSEASG00005036238 #31 ENSEASG00005011206 #30 ENSEASG00005011205 #31 SLFN14 (ENSEASG00005011210) #34 PEX12 (ENSEASG00005035401) #35 AP2B1 (ENSEASG00005011219) #37 RASL10B (ENSEASG00005011223) GAS2L2 (ENSEASG00005011225) C17orf50 (ENSEASG00005028802) Horse MODERN SPECIES 2 RNF135 (ENSECAG00000014806) RHOT1 (ENSECAG00000009478) C11H17orf75 (ENSECAG00000001756) ZNF207 (ENSECAG00000017464) PSMD11 (ENSECAG00000014306) #7 CDK5R1 (ENSECAG00000004006) #8 MYO1D (ENSECAG00000009709) #9 TMEM98 (ENSECAG00000007610) #10 SPACA3 (ENSECAG00000005842) #11 ASIC2 (ENSECAG00000000922) #12 CCL8 (ENSECAG00000034282) #17 ENSECAG00000036873 TMEM132E (ENSECAG00000023816) #19 ZNF830 (ENSECAG00000003872) #20 CCT6B (ENSECAG00000021342) #21 LIG3 (ENSECAG00000016416) #22 RFFL (ENSECAG00000015502) #23 RAD51D (ENSECAG00000014139) #24 FNDC8 (ENSECAG00000014023) #25 NLE1 (ENSECAG00000011072) #27 UNC45B (ENSECAG00000001034) #28 SLFN5 (ENSECAG00000017186) #29 ENSECAG00000047377 #31 ENSECAG00000060188 ENSECAG00000017158 #30 ENSECAG00000039393 #31 PEX12 (ENSECAG00000015368) #35 AP2B1 (ENSECAG00000009033) #37 RASL10B (ENSECAG00000008089) GAS2L2 (ENSECAG00000007690) C11H17orf50 (ENSECAG00000007503) Chiroptera ANCESTRAL SPECIES 2 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Microchiroptera ANCESTRAL SPECIES ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206.d #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Microbat MODERN SPECIES 1324 CCT6B (ENSMLUG00000012459) #21 ZNF830 (ENSMLUG00000012466) #20 LIG3 (ENSMLUG00000012470) #22 RFFL (ENSMLUG00000012490) #23 RAD51D (ENSMLUG00000012495) #24 FNDC8 (ENSMLUG00000012504) #25 NLE1 (ENSMLUG00000012506) #27 UNC45B (ENSMLUG00000012519) #28 ENSMLUG00000029329 #29 ENSMLUG00000017543 #31 SLFN14 (ENSMLUG00000002831) #34 PEX12 (ENSMLUG00000002834) #35 ENSMLUG00000002837 #37 RASL10B (ENSMLUG00000002848) GAS2L2 (ENSMLUG00000015013) C17orf50 (ENSMLUG00000002867) MMP28 (ENSMLUG00000002856) TAF15 (ENSMLUG00000002870) Greater horseshoe bat MODERN SPECIES 13 ZNF207 (ENSRFEG00010019158) ENSRFEG00010019307 PSMD11 (ENSRFEG00010019338) #7 CDK5R1 (ENSRFEG00010019423) #8 MYO1D (ENSRFEG00010019451) #9 ENSRFEG00010019534 TMEM98 (ENSRFEG00010019564) #10 SPACA3 (ENSRFEG00010019589) #11 ASIC2 (ENSRFEG00010019642) #12 ENSRFEG00010019773 CCL2 (ENSRFEG00010019809) #13 CCL8 (ENSRFEG00010019872) #16 TMEM132E (ENSRFEG00010019902) #19 CCT6B (ENSRFEG00010020082) #21 ZNF830 (ENSRFEG00010020329) #20 LIG3 (ENSRFEG00010020352) #22 RFFL (ENSRFEG00010020407) #23 RAD51D (ENSRFEG00010020450) #24 FNDC8 (ENSRFEG00010020501) #25 NLE1 (ENSRFEG00010020540) #27 UNC45B (ENSRFEG00010020648) #28 ENSRFEG00010020802 #31 SLFN14 (ENSRFEG00010020815) #34 PEX12 (ENSRFEG00010020841) #35 AP2B1 (ENSRFEG00010020872) #37 RASL10B (ENSRFEG00010020930) GAS2L2 (ENSRFEG00010020946) C17orf50 (ENSRFEG00010020982) MMP28 (ENSRFEG00010021011) TAF15 (ENSRFEG00010021040) HEATR9 (ENSRFEG00010021087) Megabat MODERN SPECIES 548 CCT6B (ENSPVAG00000013423) #21 ZNF830 (ENSPVAG00000013426) #20 LIG3 (ENSPVAG00000013427) #22 RFFL (ENSPVAG00000013428) #23 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156492 #22 Hedgehog MODERN SPECIES 4333 LIG3 (ENSEEUG00000010486) #22 Common shrew MODERN SPECIES 2667 LIG3 (ENSSARG00000003306) #22 Atlantogenata ANCESTRAL SPECIES 1 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00740000117022 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 Xenarthra ANCESTRAL SPECIES 52 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.d.a.a.a.b #13 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01100000263482.A.a.a.d.a.a.b #15 ENSGT01100000263482.A.a.a.d.b #17 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.b #29 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 ENSGT01100000263482.D ##13 Armadillo MODERN SPECIES 596 ENSDNOG00000031587 ##12 CCL2 (ENSDNOG00000048969) #13 CCL7 (ENSDNOG00000009016) #14 CCL11 (ENSDNOG00000045103) #15 CCL13 (ENSDNOG00000047977) #17 ENSDNOG00000042008 TMEM132E (ENSDNOG00000049593) #19 CCT6B (ENSDNOG00000019733) #21 ZNF830 (ENSDNOG00000019735) #20 LIG3 (ENSDNOG00000007045) #22 RFFL (ENSDNOG00000007069) #23 RAD51D (ENSDNOG00000036437) #24 FNDC8 (ENSDNOG00000005076) #25 NLE1 (ENSDNOG00000032603) #27 UNC45B (ENSDNOG00000005083) #28 SLFN5 (ENSDNOG00000033270) #29 SLFN14 (ENSDNOG00000044386) #34 PEX12 (ENSDNOG00000039512) #35 AP2B1 (ENSDNOG00000005114) #37 RASL10B (ENSDNOG00000035899) GAS2L2 (ENSDNOG00000005139) MMP28 (ENSDNOG00000038104) C17orf50 (ENSDNOG00000043929) TAF15 (ENSDNOG00000006956) HEATR9 (ENSDNOG00000017262) Sloth MODERN SPECIES 3778 LIG3 (ENSCHOG00000001938) #22 RFFL (ENSCHOG00000001950) #23 Afrotheria ANCESTRAL SPECIES 2 ENSGT00940000155641 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Afrotheria_a ANCESTRAL SPECIES 2 ENSGT00940000155641 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000161810 #11 ENSGT00940000154991.b #12 ENSGT01100000263482.A.a.a.d.a.a.a.a #14 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339 #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 Elephant MODERN SPECIES 310 RHBDL3 (ENSLAFG00000005280) C17orf75 (ENSLAFG00000005282) ZNF207 (ENSLAFG00000004317) PSMD11 (ENSLAFG00000003739) #7 CDK5R1 (ENSLAFG00000026055) #8 MYO1D (ENSLAFG00000004973) #9 TMEM98 (ENSLAFG00000011131) #10 SPACA3 (ENSLAFG00000028131) #11 ASIC2 (ENSLAFG00000022330) #12 ENSLAFG00000004719 #14 CCL8 (ENSLAFG00000013122) #16 ENSLAFG00000002372 TMEM132E (ENSLAFG00000006799) #19 CCT6B (ENSLAFG00000018317) #21 ZNF830 (ENSLAFG00000030751) #20 LIG3 (ENSLAFG00000001574) #22 RFFL (ENSLAFG00000018323) #23 RAD51D (ENSLAFG00000018328) #24 FNDC8 (ENSLAFG00000018333) #25 NLE1 (ENSLAFG00000018338) #27 UNC45B (ENSLAFG00000018342) #28 ENSLAFG00000016240 #31 SLFN14 (ENSLAFG00000027215) #34 PEX12 (ENSLAFG00000011836) #35 AP2B1 (ENSLAFG00000015777) #37 RASL10B (ENSLAFG00000021899) GAS2L2 (ENSLAFG00000022800) ENSLAFG00000023016 #30 C17orf50 (ENSLAFG00000025653) MMP28 (ENSLAFG00000018326) TAF15 (ENSLAFG00000018332) Hyrax MODERN SPECIES 2888 LIG3 (ENSPCAG00000002413) #22 RFFL (ENSPCAG00000002506) #23 Tenrec MODERN SPECIES 2805 CCT6B (ENSETEG00000001704) #21 ZNF830 (ENSETEG00000001709) #20 LIG3 (ENSETEG00000001710) #22 Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000158838 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.a.a #13 ENSGT01100000263482.A.a.a.b #13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339.l #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.a.a #13 ENSGT01100000263482.A.a.a.a.b.b #13 ENSGT01100000263482.A.a.a.a.b.a #13 ENSGT01100000263482.A.a.a.b #13 ENSGT01030000234760 ENSGT00940000158479 #19 ENSGT00940000156339.l #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000162866 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Diprotodontia ANCESTRAL SPECIES 5 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.a.a #13 ENSGT01100000263482.A.a.a.a.b.b #13 ENSGT01100000263482.A.a.a.a.b.a #13 ENSGT01100000263482.A.a.a.b #13 ENSGT00940000158479 #19 ENSGT00940000156339.l #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00390000005481 ENSGT00730000111057 ENSGT00530000063301.a.a #7 ENSGT00390000008812.b.b #8 ENSGT00940000157411 #9 ENSGT00390000012062 #10 ENSGT00940000154991.b #12 ENSGT00940000154991.a.b ##12 ENSGT01100000263482.A.a.a.a.a #13 ENSGT01100000263482.A.a.a.a.b.b #13 ENSGT01100000263482.A.a.a.a.b.a #13 ENSGT01100000263482.A.a.a.b #13 ENSGT00940000158479 #19 ENSGT00940000156339.l #21 ENSGT00390000012151 #20 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00390000006458 #25 ENSGT00940000157881 #27 ENSGT00940000157654 #28 ENSGT00410000025651.A.b.a.a.a.a #31 ENSGT00410000025651.A.b.b #34 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000162866 ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1007 ENSVURG00010011687 RHOT1 (ENSVURG00010011703) RHBDL3 (ENSVURG00010011748) C17orf75 (ENSVURG00010011786) ZNF207 (ENSVURG00010011823) PSMD11 (ENSVURG00010011853) #7 MYO1D (ENSVURG00010011871) #9 ENSVURG00010011898 TMEM98 (ENSVURG00010011902) #10 ASIC2 (ENSVURG00010011918) #12 ENSVURG00010011934 ##12 ENSVURG00010011947 #13 ENSVURG00010011968 #19 ENSVURG00010012137 #21 ENSVURG00010012324 #20 ENSVURG00010012330 #22 ENSVURG00010012349 #23 ENSVURG00010012360 #24 ENSVURG00010012368 #27 ENSVURG00010012378 #28 ENSVURG00010012399 #31 ENSVURG00010012414 #34 ENSVURG00010012437 #35 ENSVURG00010012444 #37 ENSVURG00010012483 ENSVURG00010012517 ENSVURG00010012622 ENSVURG00010012627 ENSVURG00010012645 ENSVURG00010012661 ##13 ENSVURG00010012668 ##13 Common wonbat MODERN SPECIES 1007 ENSVURG00010015097 ##12 ENSVURG00010015121 #13 ENSVURG00010015173 #19 ENSVURG00010015376 #21 ENSVURG00010015482 #20 ENSVURG00010015491 #22 ENSVURG00010015527 #23 ENSVURG00010015558 #24 ENSVURG00010015596 #27 ENSVURG00010015626 #28 ENSVURG00010015693 #31 ENSVURG00010015701 #34 ENSVURG00010015711 #35 ENSVURG00010015727 #37 ENSVURG00010015773 ENSVURG00010015798 ENSVURG00010015909 ENSVURG00010015920 ENSVURG00010015930 ENSVURG00010015947 ##13 ENSVURG00010015955 ##13 koala MODERN SPECIES 4 CCT6B (ENSPCIG00000003668) #21 ZNF830 (ENSPCIG00000003674) #20 LIG3 (ENSPCIG00000003680) #22 RFFL (ENSPCIG00000003696) #23 RAD51D (ENSPCIG00000014413) #24 ENSPCIG00000031157 #25 NLE1 (ENSPCIG00000007697) #27 UNC45B (ENSPCIG00000005742) #28 ENSPCIG00000003699 #31 SLFN14 (ENSPCIG00000003715) #34 PEX12 (ENSPCIG00000003725) #35 AP2B1 (ENSPCIG00000003733) #37 RASL10B (ENSPCIG00000003771) ENSPCIG00000032524 ENSPCIG00000003773 ENSPCIG00000003779 MMP28 (ENSPCIG00000003781) TAF15 (ENSPCIG00000003783) Wallaby MODERN SPECIES 5258 LIG3 (ENSMEUG00000012596) #22 RFFL (ENSMEUG00000012628) #23 Tasmanian devil MODERN SPECIES 3 PSMD11 (ENSSHAG00000018453) #7 CDK5R1 (ENSSHAG00000025844) #8 MYO1D (ENSSHAG00000018189) #9 TMEM98 (ENSSHAG00000017941) #10 ASIC2 (ENSSHAG00000017657) #12 ENSSHAG00000014395 ##12 ENSSHAG00000027751 ENSSHAG00000023113 #13 ENSSHAG00000013961 #13 ENSSHAG00000013914 #13 ENSSHAG00000013669 #13 ENSSHAG00000013613 TMEM132E (ENSSHAG00000011259) #19 ZNF830 (ENSSHAG00000030733) #20 CCT6B (ENSSHAG00000022288) #21 LIG3 (ENSSHAG00000006134) #22 RFFL (ENSSHAG00000005858) #23 RAD51D (ENSSHAG00000004510) #24 ENSSHAG00000004314 #25 NLE1 (ENSSHAG00000004045) #27 UNC45B (ENSSHAG00000003067) #28 ENSSHAG00000002296 #31 SLFN14 (ENSSHAG00000000713) #34 PEX12 (ENSSHAG00000006809) #35 AP2B1 (ENSSHAG00000005269) #37 RASL10B (ENSSHAG00000024132) ENSSHAG00000030243 ENSSHAG00000000447 ENSSHAG00000023276 MMP28 (ENSSHAG00000026854) TAF15 (ENSSHAG00000003105) Opossum MODERN SPECIES 1 ZNF207 (ENSMODG00000019185) PSMD11 (ENSMODG00000019183) #7 CDK5R1 (ENSMODG00000023193) #8 MYO1D (ENSMODG00000019177) #9 TMEM98 (ENSMODG00000049184) #10 ENSMODG00000019169 ENSMODG00000040234 ASIC2 (ENSMODG00000019166) #12 ENSMODG00000019163 ##12 ENSMODG00000019162 #13 ENSMODG00000019159 #13 ENSMODG00000019157 #13 ENSMODG00000019155 #19 ZNF830 (ENSMODG00000019150) #20 CCT6B (ENSMODG00000019152) #21 LIG3 (ENSMODG00000019147) #22 RFFL (ENSMODG00000019143) #23 RAD51D (ENSMODG00000019141) #24 ENSMODG00000028821 #25 NLE1 (ENSMODG00000019137) #27 UNC45B (ENSMODG00000019133) #28 ENSMODG00000039989 ENSMODG00000039391 #31 SLFN14 (ENSMODG00000019130) #34 ENSMODG00000027779 PEX12 (ENSMODG00000019129) #35 AP2B1 (ENSMODG00000019128) #37 RASL10B (ENSMODG00000019126) ENSMODG00000019125 ENSMODG00000046981 MMP28 (ENSMODG00000019124) Platypus MODERN SPECIES 8 ENSOANG00000040628 ELN (ENSOANG00000043254) LIMK1 (ENSOANG00000002923) ENSOANG00000036390 ##13 ENSOANG00000002927 ##13 ENSOANG00000040167 ENSOANG00000044680 ENSOANG00000050426 ENSOANG00000048769 ENSOANG00000002929 #13 ENSOANG00000047804 ENSOANG00000044227 ENSOANG00000021072 #13 ENSOANG00000050489 TMEM132E (ENSOANG00000043508) #19 LIG3 (ENSOANG00000050784) #22 RFFL (ENSOANG00000049711) #23 ENSOANG00000046664 #24 NLE1 (ENSOANG00000036408) #27 ENSOANG00000044566 UNC45B (ENSOANG00000044231) #28 PEX12 (ENSOANG00000042515) #35 AP2B1 (ENSOANG00000050274) #37 RASL10B (ENSOANG00000038310) ENSOANG00000040830 ENSOANG00000045644 MMP28 (ENSOANG00000014274) TAF15 (ENSOANG00000014273) ENSOANG00000036567 POR (ENSOANG00000043253) ENSOANG00000042315 Sauria ANCESTRAL SPECIES 18 ENSGT00390000013836 ENSGT00390000002172.A.a ENSGT00510000047471 ENSGT01030000235191.A ENSGT01030000235191.B ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##13 ENSGT01100000263482.F #18 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00940000165977 ENSGT00960000191068 ENSGT00390000000699 Lepidosauria ANCESTRAL SPECIES 103 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a Episquamata ANCESTRAL SPECIES 13 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000156339 #21 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Laterata ANCESTRAL SPECIES 41 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000156339 #21 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 Common wall lizard MODERN SPECIES 6 HSF5 (ENSPMRG00000022296) MTMR4 (ENSPMRG00000020964) ENSPMRG00000020733 ABHD11 (ENSPMRG00000020693) CLDN3 (ENSPMRG00000020677) ENSPMRG00000020669 METTL27 (ENSPMRG00000020655) VKORC1L1 (ENSPMRG00000020643) GUSB (ENSPMRG00000020473) ASL (ENSPMRG00000019854) CRCP (ENSPMRG00000019769) TPST1 (ENSPMRG00000019762) KCTD7 (ENSPMRG00000019747) RABGEF1 (ENSPMRG00000019642) TMEM132E (ENSPMRG00000019578) #19 LIG3 (ENSPMRG00000019161) #22 RFFL (ENSPMRG00000019104) #23 RAD51D (ENSPMRG00000019093) #24 ENSPMRG00000019089 UNC45B (ENSPMRG00000019047) #28 ENSPMRG00000019029 MMP28 (ENSPMRG00000018993) ENSPMRG00000018970 RASL10B (ENSPMRG00000018960) AP2B1 (ENSPMRG00000018527) #37 PEX12 (ENSPMRG00000018371) #35 RHBDD2 (ENSPMRG00000018356) POR (ENSPMRG00000017929) TMEM120A (ENSPMRG00000017797) STYXL1 (ENSPMRG00000017774) MDH2 (ENSPMRG00000017750) Argentine black and white tegu MODERN SPECIES 163 TMEM132E (ENSSMRG00000003737) #19 LIG3 (ENSSMRG00000003745) #22 RFFL (ENSSMRG00000003748) #23 RAD51D (ENSSMRG00000003754) #24 UNC45B (ENSSMRG00000003760) #28 PEX12 (ENSSMRG00000003769) #35 AP2B1 (ENSSMRG00000003773) #37 RASL10B (ENSSMRG00000003821) ENSSMRG00000003825 ENSSMRG00000003830 MMP28 (ENSSMRG00000003832) Toxicofera ANCESTRAL SPECIES 23 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000156339 #21 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Elapidae ANCESTRAL SPECIES 20 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000156339 #21 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Elapidae_a ANCESTRAL SPECIES 20 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000156339 #21 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Acanthophiinae ANCESTRAL SPECIES 11 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000156339 #21 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Mainland tiger snake MODERN SPECIES 44 LIG3 (ENSNSUG00000009329) #22 RFFL (ENSNSUG00000009328) #23 ENSNSUG00000009327 #24 UNC45B (ENSNSUG00000009326) #28 PEX12 (ENSNSUG00000009324) #35 AP2B1 (ENSNSUG00000009247) #37 RASL10B (ENSNSUG00000009246) ENSNSUG00000009245 ENSNSUG00000009244 MMP28 (ENSNSUG00000009243) TAF15 (ENSNSUG00000009242) ENSNSUG00000009241 RHBDD2 (ENSNSUG00000009240) POR (ENSNSUG00000009239) TMEM120A (ENSNSUG00000009238) ENSNSUG00000009228 Eastern brown snake MODERN SPECIES 40 NIPSNAP2 (ENSPTXG00000004794) PSPH (ENSPTXG00000004792) CCT6B (ENSPTXG00000004787) #21 ENSPTXG00000004784 PHKG1 (ENSPTXG00000004783) CHCHD2 (ENSPTXG00000004782) ENSPTXG00000004781 VKORC1L1 (ENSPTXG00000004780) GUSB (ENSPTXG00000004779) ASL (ENSPTXG00000004777) CRCP (ENSPTXG00000004776) TPST1 (ENSPTXG00000004774) KCTD7 (ENSPTXG00000004773) RABGEF1 (ENSPTXG00000004771) TMEM132E (ENSPTXG00000004750) #19 LIG3 (ENSPTXG00000004746) #22 RFFL (ENSPTXG00000004744) #23 RAD51D (ENSPTXG00000004743) #24 UNC45B (ENSPTXG00000003841) #28 PEX12 (ENSPTXG00000003827) #35 AP2B1 (ENSPTXG00000003826) #37 RASL10B (ENSPTXG00000003825) ENSPTXG00000003824 MMP28 (ENSPTXG00000003814) TAF15 (ENSPTXG00000003811) ENSPTXG00000003809 RHBDD2 (ENSPTXG00000003806) POR (ENSPTXG00000003804) TMEM120A (ENSPTXG00000003800) ENSPTXG00000003794 MDH2 (ENSPTXG00000003791) Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 4923 ENSLLTG00000007010 #22 Blue-lipped sea krait MODERN SPECIES 5685 ENSLLTG00000010225 #22 ENSLLTG00000014815 #23 Indian cobra MODERN SPECIES CCT6B (ENSNNAG00000014784) #21 ENSNNAG00000014745 PHKG1 (ENSNNAG00000014696) CHCHD2 (ENSNNAG00000014673) ENSNNAG00000014661 VKORC1L1 (ENSNNAG00000014647) GUSB (ENSNNAG00000014591) ASL (ENSNNAG00000014561) CRCP (ENSNNAG00000014523) ENSNNAG00000014509 TPST1 (ENSNNAG00000014478) KCTD7 (ENSNNAG00000014462) RABGEF1 (ENSNNAG00000014443) TMEM132E (ENSNNAG00000014391) #19 RFFL (ENSNNAG00000014281) #23 LIG3 (ENSNNAG00000014171) #22 RAD51D (ENSNNAG00000014103) #24 UNC45B (ENSNNAG00000014048) #28 PEX12 (ENSNNAG00000014026) #35 AP2B1 (ENSNNAG00000013966) #37 RASL10B (ENSNNAG00000013950) ENSNNAG00000013864 ENSNNAG00000013856 TAF15 (ENSNNAG00000013821) ENSNNAG00000013812 ENSNNAG00000013799 POR (ENSNNAG00000013759) TMEM120A (ENSNNAG00000013725) ENSNNAG00000013666 MDH2 (ENSNNAG00000013654) HSPB1 (ENSNNAG00000013601) tuatara MODERN SPECIES 1832 LIG3 (ENSSPUG00000010440) #22 RFFL (ENSSPUG00000010463) #23 RAD51D (ENSSPUG00000010479) #24 ENSSPUG00000010489 ENSSPUG00000010498 C1QBP (ENSSPUG00000010511) RPAIN (ENSSPUG00000010523) NUP88 (ENSSPUG00000010536) RABEP1 (ENSSPUG00000010564) IFT22 (ENSSPUG00000010619) COL26A1 (ENSSPUG00000010633) ENSSPUG00000010657 ENSSPUG00000010681 ENSSPUG00000010706 SH2B2 (ENSSPUG00000010724) ENSSPUG00000010744 Archelosauria ANCESTRAL SPECIES 18 ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT00960000188078 ENSGT00940000154126.h.b.a.b ENSGT01100000263482.C.b.a.a ##13 ENSGT01100000263482.B.b ##13 ENSGT01100000263482.D ##13 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00940000165977 ENSGT00960000191068 ENSGT00390000000699 Archosauria ANCESTRAL SPECIES 18 ENSGT01100000263482.B.a ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a Aves ANCESTRAL SPECIES 18 ENSGT00950000183122.B ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 Neognathae ANCESTRAL SPECIES 18 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Galloanserae ANCESTRAL SPECIES 17 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Anatidae ANCESTRAL SPECIES 27 ENSGT00940000157044 ENSGT00440000038159.ic.a ENSGT00940000158139 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT00950000182865.b.b.a ENSGT01100000263482.B.a.c ##13 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Duck MODERN SPECIES 11 VKORC1L1 (ENSAPLG00000019287) ENSAPLG00000012325 ENSAPLG00000019405 SUMF2 (ENSAPLG00000011312) CCT6B (ENSAPLG00000010870) #21 PSPH (ENSAPLG00000010694) NIPSNAP2 (ENSAPLG00000010581) MRPS17 (ENSAPLG00000010523) ENSAPLG00000009847 ENSAPLG00000027650 ##13 ENSAPLG00000031023 ENSAPLG00000026938 ENSAPLG00000009358 ENSAPLG00000021360 TMEM132E (ENSAPLG00000009524) #19 LIG3 (ENSAPLG00000008964) #22 RFFL (ENSAPLG00000008748) #23 RAD51D (ENSAPLG00000008196) #24 AP2B1 (ENSAPLG00000006779) #37 ENSAPLG00000030046 ENSAPLG00000023918 MMP28 (ENSAPLG00000006470) RHBDD2 (ENSAPLG00000025011) TAF15 (ENSAPLG00000006217) POR (ENSAPLG00000005585) TMEM120A (ENSAPLG00000005153) MDH2 (ENSAPLG00000004591) SRRM3 (ENSAPLG00000004545) YWHAG (ENSAPLG00000004442) ENSAPLG00000003804 ALKBH4 (ENSAPLG00000003499) Pink-footed goose MODERN SPECIES 38 VKORC1L1 (ENSABRG00000007122) CHCHD2 (ENSABRG00000007117) PHKG1 (ENSABRG00000007115) ENSABRG00000007092 CCT6B (ENSABRG00000007079) #21 PSPH (ENSABRG00000007076) NIPSNAP2 (ENSABRG00000007071) MRPS17 (ENSABRG00000007069) ENSABRG00000007059 ENSABRG00000007050 ##13 ENSABRG00000007039 ENSABRG00000007029 ##13 ENSABRG00000007024 ENSABRG00000007021 TMEM132E (ENSABRG00000007017) #19 LIG3 (ENSABRG00000004295) #22 RFFL (ENSABRG00000004062) #23 RAD51D (ENSABRG00000003937) #24 ENSABRG00000003886 UNC45B (ENSABRG00000002564) #28 ENSABRG00000002424 ##29 PEX12 (ENSABRG00000002398) #35 AP2B1 (ENSABRG00000002319) #37 RASL10B (ENSABRG00000002299) ENSABRG00000002276 MMP28 (ENSABRG00000002268) TAF15 (ENSABRG00000002253) RHBDD2 (ENSABRG00000002103) POR (ENSABRG00000002005) TMEM120A (ENSABRG00000001955) ENSABRG00000001887 Phasianidae ANCESTRAL SPECIES 17 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT01070000257310 ENSGT00940000156847 ENSGT00390000007848.a Phasianidae_b ANCESTRAL SPECIES 17 ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT01070000257310 ENSGT00940000156847 ENSGT00390000007848.a Turkey MODERN SPECIES 13 MDH2 (ENSMGAG00000003716) ENSMGAG00000003805 ENSMGAG00000003770 ENSMGAG00000003839 ENSMGAG00000021885 ENSMGAG00000003842 ENSMGAG00000004013 ENSMGAG00000004003 ENSMGAG00000003978 ENSMGAG00000004018 #37 ENSMGAG00000004214 #24 ENSMGAG00000019489 UNC45B (ENSMGAG00000004173) #28 ENSMGAG00000004153 ##29 ENSMGAG00000004125 #35 ENSMGAG00000004064 #22 ENSMGAG00000004256 #23 ENSMGAG00000017271 #19 ENSMGAG00000001791 ENSMGAG00000019463 ##13 ENSMGAG00000017879 ENSMGAG00000019065 ENSMGAG00000004283 ENSMGAG00000021214 ##13 ENSMGAG00000004292 ENSMGAG00000004317 ENSMGAG00000016638 ENSMGAG00000004428 ENSMGAG00000021563 ENSMGAG00000004344 #21 CHCHD2 (ENSMGAG00000015464) Chicken MODERN SPECIES 10 PHKG1 (ENSGALG00010029655) CCT6A (ENSGALG00010029653) #21 PSPH (ENSGALG00010029649) NIPSNAP2 (ENSGALG00010029648) MRPS17 (ENSGALG00010029646) NF2L (ENSGALG00010029645) ENSGALG00010029641 ##13 ENSGALG00010029643 ENSGALG00010029962 ##13 ENSGALG00010029640 ENSGALG00010029639 ##13 ENSGALG00010029637 CCL26 (ENSGALG00010029635) CCLI5 (ENSGALG00010029956) TMEM132E (ENSGALG00010029632) #19 LIG3 (ENSGALG00010029631) #22 RFFL (ENSGALG00010029950) #23 RAD51D (ENSGALG00010029630) #24 ENSGALG00010029786 UNC45B (ENSGALG00010029628) #28 PEX12 (ENSGALG00010029627) #35 AP2B1 (ENSGALG00010029626) #37 RASL10B (ENSGALG00010029624) ENSGALG00010029623 MMP28 (ENSGALG00010029622) TAF15 (ENSGALG00010029621) ENSGALG00010029620 ENSGALG00010029619 POR (ENSGALG00010029617) TMEM120A (ENSGALG00010029616) ENSGALG00010029615 Japanese quail MODERN SPECIES 10 CHCHD2 (ENSCJPG00005010355) PHKG1 (ENSCJPG00005010354) ENSCJPG00005010353 CCT6B (ENSCJPG00005010046) #21 PSPH (ENSCJPG00005010033) NIPSNAP2 (ENSCJPG00005010032) MRPS17 (ENSCJPG00005010031) ENSCJPG00005010024 ENSCJPG00005010023 ##13 ENSCJPG00005010021 ##13 ENSCJPG00005010019 ENSCJPG00005010017 ##13 ENSCJPG00005010016 ENSCJPG00005010014 TMEM132E (ENSCJPG00005009953) #19 LIG3 (ENSCJPG00005009942) #22 RFFL (ENSCJPG00005009925) #23 RAD51D (ENSCJPG00005009921) #24 ENSCJPG00005009920 UNC45B (ENSCJPG00005009918) #28 PEX12 (ENSCJPG00005009914) #35 AP2B1 (ENSCJPG00005009912) #37 RASL10B (ENSCJPG00005009905) ENSCJPG00005009902 MMP28 (ENSCJPG00005009900) TAF15 (ENSCJPG00005009893) ENSCJPG00005009827 POR (ENSCJPG00005009821) TMEM120A (ENSCJPG00005009816) ENSCJPG00005009815 MDH2 (ENSCJPG00005009814) Neognathae_b ANCESTRAL SPECIES 20 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 Passeriformes ANCESTRAL SPECIES 18 ENSGT00950000183122.B.k.a ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 Great tit MODERN SPECIES 9 ENSPMJG00000019016 ASL (ENSPMJG00000019015) GUSB (ENSPMJG00000019014) VKORC1L1 (ENSPMJG00000019013) CHCHD2 (ENSPMJG00000019012) PHKG1 (ENSPMJG00000019011) SUMF2 (ENSPMJG00000019010) CCT6B (ENSPMJG00000019007) #21 PSPH (ENSPMJG00000019006) NIPSNAP2 (ENSPMJG00000019005) MRPS17 (ENSPMJG00000019004) ENSPMJG00000019003 ENSPMJG00000019002 ENSPMJG00000019001 TMEM132E (ENSPMJG00000019000) #19 LIG3 (ENSPMJG00000018995) #22 RFFL (ENSPMJG00000018994) #23 RAD51D (ENSPMJG00000018993) #24 UNC45B (ENSPMJG00000018992) #28 PEX12 (ENSPMJG00000018990) #35 AP2B1 (ENSPMJG00000018989) #37 RASL10B (ENSPMJG00000018988) ENSPMJG00000018987 MMP28 (ENSPMJG00000018986) TAF15 (ENSPMJG00000018985) RHBDD2 (ENSPMJG00000018984) POR (ENSPMJG00000018982) TMEM120A (ENSPMJG00000018981) ENSPMJG00000018980 MDH2 (ENSPMJG00000018979) SRRM3 (ENSPMJG00000018978) Passeriformes_d ANCESTRAL SPECIES 18 ENSGT00950000183122.B.k.a ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00940000165977 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 Flycatcher MODERN SPECIES 9 ENSFALG00000006731 ENSFALG00000006743 ENSFALG00000006748 VKORC1L1 (ENSFALG00000028547) ENSFALG00000006773 ENSFALG00000006781 CHCHD2 (ENSFALG00000006769) ENSFALG00000006782 #21 PSPH (ENSFALG00000006784) NIPSNAP2 (ENSFALG00000006790) MRPS17 (ENSFALG00000026220) ENSFALG00000006800 ENSFALG00000028260 ##13 ENSFALG00000023753 ENSFALG00000006806 #19 LIG3 (ENSFALG00000009743) #22 RFFL (ENSFALG00000009730) #23 RAD51D (ENSFALG00000009726) #24 UNC45B (ENSFALG00000009721) #28 PEX12 (ENSFALG00000009719) #35 AP2B1 (ENSFALG00000009715) #37 RASL10B (ENSFALG00000027159) ENSFALG00000027238 MMP28 (ENSFALG00000009701) ENSFALG00000009696 ENSFALG00000009693 POR (ENSFALG00000009688) TMEM120A (ENSFALG00000009669) MDH2 (ENSFALG00000009620) SRRM3 (ENSFALG00000009603) ENSFALG00000026877 Passeriformes_g ANCESTRAL SPECIES 18 ENSGT00950000183122.B.k.a ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 Medium ground finch MODERN SPECIES 90 ASL (ENSGFOG00000003487) GUSB (ENSGFOG00000003460) VKORC1L1 (ENSGFOG00000003434) CHCHD2 (ENSGFOG00000003412) PHKG1 (ENSGFOG00000003393) ENSGFOG00000003371 CCT6B (ENSGFOG00000002959) #21 PSPH (ENSGFOG00000002913) NIPSNAP2 (ENSGFOG00000002871) MRPS17 (ENSGFOG00000002862) ENSGFOG00000002814 ENSGFOG00000002803 ##13 ENSGFOG00000002785 ENSGFOG00000002768 TMEM132E (ENSGFOG00000002732) #19 LIG3 (ENSGFOG00000002126) #22 RFFL (ENSGFOG00000002052) #23 RAD51D (ENSGFOG00000002037) #24 UNC45B (ENSGFOG00000001128) #28 PEX12 (ENSGFOG00000000983) #35 AP2B1 (ENSGFOG00000000948) #37 RASL10B (ENSGFOG00000000933) ENSGFOG00000000917 MMP28 (ENSGFOG00000000904) ENSGFOG00000000894 TAF15 (ENSGFOG00000000872) ENSGFOG00000000852 POR (ENSGFOG00000000818) TMEM120A (ENSGFOG00000000663) ENSGFOG00000000640 MDH2 (ENSGFOG00000000621) Passeroidea ANCESTRAL SPECIES 20 ENSGT00950000183122.B.k.a ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00390000008983.b ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00950000185966 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 Zebra finch MODERN SPECIES 10 ENSTGUG00000005304 ENSTGUG00000018246 GUSB (ENSTGUG00000005273) VKORC1L1 (ENSTGUG00000005263) CHCHD2 (ENSTGUG00000005194) PHKG1 (ENSTGUG00000005156) ENSTGUG00000005131 CCT6B (ENSTGUG00000005105) #21 PSPH (ENSTGUG00000021934) NIPSNAP2 (ENSTGUG00000005056) MRPS17 (ENSTGUG00000026540) ENSTGUG00000005025 ENSTGUG00000005024 ##13 ENSTGUG00000024039 TMEM132E (ENSTGUG00000005003) #19 LIG3 (ENSTGUG00000004932) #22 RFFL (ENSTGUG00000004921) #23 RAD51D (ENSTGUG00000004887) #24 UNC45B (ENSTGUG00000004851) #28 ENSTGUG00000026935 PEX12 (ENSTGUG00000004847) #35 AP2B1 (ENSTGUG00000004771) #37 RASL10B (ENSTGUG00000023856) ENSTGUG00000004758 MMP28 (ENSTGUG00000004745) TAF15 (ENSTGUG00000004702) ENSTGUG00000004693 POR (ENSTGUG00000004657) TMEM120A (ENSTGUG00000004630) ENSTGUG00000004616 MDH2 (ENSTGUG00000004571) Common canary MODERN SPECIES 28 CRCP (ENSSCAG00000006859) GUSB (ENSSCAG00000006694) VKORC1L1 (ENSSCAG00000006675) CHCHD2 (ENSSCAG00000006673) PHKG1 (ENSSCAG00000006669) ENSSCAG00000006661 CCT6B (ENSSCAG00000006650) #21 PSPH (ENSSCAG00000006646) NIPSNAP2 (ENSSCAG00000006643) MRPS17 (ENSSCAG00000006640) ENSSCAG00000006625 ENSSCAG00000006618 ##13 ENSSCAG00000006617 ENSSCAG00000006614 TMEM132E (ENSSCAG00000006611) #19 LIG3 (ENSSCAG00000006598) #22 RFFL (ENSSCAG00000006590) #23 RAD51D (ENSSCAG00000006580) #24 UNC45B (ENSSCAG00000006357) #28 ENSSCAG00000006312 PEX12 (ENSSCAG00000006302) #35 AP2B1 (ENSSCAG00000006287) #37 RASL10B (ENSSCAG00000006283) ENSSCAG00000006274 MMP28 (ENSSCAG00000006269) TAF15 (ENSSCAG00000006263) RHBDD2 (ENSSCAG00000006252) POR (ENSSCAG00000006242) TMEM120A (ENSSCAG00000006149) ENSSCAG00000006123 MDH2 (ENSSCAG00000006093) Neognathae_c ANCESTRAL SPECIES 22 ENSGT00390000001752 ENSGT00940000157044 ENSGT00440000038159.ic ENSGT00940000158139 ENSGT00940000162897 ENSGT00940000156339 #21 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00950000185966 ENSGT00940000157654 #28 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 Kakapo MODERN SPECIES 58 ENSSHBG00005007041 GUSB (ENSSHBG00005007021) VKORC1L1 (ENSSHBG00005007009) CHCHD2 (ENSSHBG00005006992) PHKG1 (ENSSHBG00005006976) SUMF2 (ENSSHBG00005006956) CCT6B (ENSSHBG00005006893) #21 PSPH (ENSSHBG00005006877) NIPSNAP2 (ENSSHBG00005006860) ENSSHBG00005006847 ENSSHBG00005006541 ENSSHBG00005006507 ##13 ENSSHBG00005006454 ENSSHBG00005006430 TMEM132E (ENSSHBG00005006409) #19 LIG3 (ENSSHBG00005006388) #22 RFFL (ENSSHBG00005006362) #23 RAD51D (ENSSHBG00005006327) #24 ENSSHBG00005006311 UNC45B (ENSSHBG00005006213) #28 PEX12 (ENSSHBG00005006156) #35 AP2B1 (ENSSHBG00005006021) #37 RASL10B (ENSSHBG00005006000) ENSSHBG00005005958 MMP28 (ENSSHBG00005005940) TAF15 (ENSSHBG00005005797) RHBDD2 (ENSSHBG00005005771) POR (ENSSHBG00005005716) TMEM120A (ENSSHBG00005000765) ENSSHBG00005000755 MDH2 (ENSSHBG00005000746) Golden eagle MODERN SPECIES 1 VKORC1L1 (ENSACCG00020004768) CHCHD2 (ENSACCG00020004763) PHKG1 (ENSACCG00020004757) SUMF2 (ENSACCG00020004743) CCT6B (ENSACCG00020004721) #21 PSPH (ENSACCG00020004706) NIPSNAP2 (ENSACCG00020004694) MRPS17 (ENSACCG00020004684) ENSACCG00020004671 ENSACCG00020004655 ##13 ENSACCG00020004647 ENSACCG00020004634 ##13 ENSACCG00020004625 ENSACCG00020004618 TMEM132E (ENSACCG00020004605) #19 LIG3 (ENSACCG00020004580) #22 RFFL (ENSACCG00020004557) #23 RAD51D (ENSACCG00020004546) #24 ENSACCG00020004538 UNC45B (ENSACCG00020004519) #28 PEX12 (ENSACCG00020004505) #35 AP2B1 (ENSACCG00020004479) #37 RASL10B (ENSACCG00020004455) ENSACCG00020004447 MMP28 (ENSACCG00020004423) TAF15 (ENSACCG00020004390) RHBDD2 (ENSACCG00020004381) ENSACCG00020004375 POR (ENSACCG00020004354) TMEM120A (ENSACCG00020004328) ENSACCG00020004308 African ostrich MODERN SPECIES 1007 LIG3 (ENSSCUG00000013712) #22 RFFL (ENSSCUG00000013718) #23 RAD51D (ENSSCUG00000013719) #24 UNC45B (ENSSCUG00000013721) #28 ENSSCUG00000013725 ##29 PEX12 (ENSSCUG00000013729) #35 AP2B1 (ENSSCUG00000013799) #37 RASL10B (ENSSCUG00000013917) MMP28 (ENSSCUG00000013920) TAF15 (ENSSCUG00000013929) RHBDD2 (ENSSCUG00000013940) POR (ENSSCUG00000013947) TMEM120A (ENSSCUG00000013956) ENSSCUG00000013958 MDH2 (ENSSCUG00000013964) Australian saltwater crocodile MODERN SPECIES 50 LIG3 (ENSCPRG00005005479) #22 RFFL (ENSCPRG00005005502) #23 RAD51D (ENSCPRG00005005512) #24 UNC45B (ENSCPRG00005005522) #28 ENSCPRG00005005532 ENSCPRG00005005537 ##29 ENSCPRG00005005541 PEX12 (ENSCPRG00005005543) #35 AP2B1 (ENSCPRG00005005555) #37 RASL10B (ENSCPRG00005005573) ENSCPRG00005005576 ENSCPRG00005005590 MMP28 (ENSCPRG00005005593) TAF15 (ENSCPRG00005005599) RHBDD2 (ENSCPRG00005005613) POR (ENSCPRG00005005620) Cryptodira ANCESTRAL SPECIES 18 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##13 ENSGT00960000188078 ENSGT00940000154126.h.b.a.b ENSGT01100000263482.C.b.a.a ##13 ENSGT01100000263482.C.b.b.b ##13 ENSGT01100000263482.C.b.b.a ##13 ENSGT01100000263482.D ##13 ENSGT01100000263482.C.b.a.b ##13 ENSGT01100000263482.B.a ##13 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a Testudinoidea ANCESTRAL SPECIES 15 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##13 ENSGT00960000188078 ENSGT00940000154126.h.b.a.b ENSGT01100000263482.C.b.a.a ##13 ENSGT01100000263482.C.b.b.b ##13 ENSGT01100000263482.C.b.b.a ##13 ENSGT01100000263482.D ##13 ENSGT01100000263482.C.b.a.b ##13 ENSGT01100000263482.B.a ##13 ENSGT00950000182865.b.b.a ENSGT01030000235390.b ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a Emydidae ANCESTRAL SPECIES 16 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00410000025651.A.a.c ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a Three-toed box turtle MODERN SPECIES 106 ENSTMTG00000020580 TMEM132E (ENSTMTG00000020593) #19 LIG3 (ENSTMTG00000020663) #22 RFFL (ENSTMTG00000020681) #23 RAD51D (ENSTMTG00000020691) #24 UNC45B (ENSTMTG00000020729) #28 ENSTMTG00000021058 ##29 ENSTMTG00000021076 #30 PEX12 (ENSTMTG00000021086) #35 AP2B1 (ENSTMTG00000021100) #37 RASL10B (ENSTMTG00000021120) ENSTMTG00000021131 C17orf50 (ENSTMTG00000021173) MMP28 (ENSTMTG00000021182) TAF15 (ENSTMTG00000021209) ENSTMTG00000021228 RHBDD2 (ENSTMTG00000021234) POR (ENSTMTG00000021239) painted turtle MODERN SPECIES 923 ENSCPBG00000002742 TMEM132E (ENSCPBG00000002772) #19 LIG3 (ENSCPBG00000002807) #22 RFFL (ENSCPBG00000002843) #23 RAD51D (ENSCPBG00000002895) #24 Testudinidae ANCESTRAL SPECIES 19 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##13 ENSGT00940000154126.h.b.a.b ENSGT01100000263482.C.b.a.a ##13 ENSGT01100000263482.C.b.b.b ##13 ENSGT01100000263482.C.b.b.a ##13 ENSGT01100000263482.D ##13 ENSGT01100000263482.C.b.a.b ##13 ENSGT01100000263482.B.a ##13 ENSGT00950000182865.b.b.a ENSGT00960000192959 ENSGT00940000162512 ENSGT01030000235390.b ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 ENSGT00940000159095 #24 ENSGT00940000157654 #28 ENSGT00410000025651.A.a ##29 ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT00940000154849.a ENSGT00390000007830 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00390000010113 Goode s thornscrub tortoise MODERN SPECIES 8 NSUN5 (ENSGEVG00005015632) ENSGEVG00005015594 HIP1 (ENSGEVG00005015540) CCL26 (ENSGEVG00005015520) ##13 ENSGEVG00005015492 ENSGEVG00005015474 ##13 ENSGEVG00005015461 ##13 ENSGEVG00005015446 ##13 ENSGEVG00005015377 ##13 ENSGEVG00005015278 ENSGEVG00005015199 FAM170B (ENSGEVG00005015147) ENSGEVG00005015109 ENSGEVG00005014987 ##13 TMEM132E (ENSGEVG00005014760) #19 LIG3 (ENSGEVG00005014673) #22 RFFL (ENSGEVG00005014634) #23 RAD51D (ENSGEVG00005014593) #24 UNC45B (ENSGEVG00005014156) #28 ENSGEVG00005014013 ##29 PEX12 (ENSGEVG00005013971) #35 AP2B1 (ENSGEVG00005013893) #37 RASL10B (ENSGEVG00005013836) ENSGEVG00005013773 C17orf50 (ENSGEVG00005013730) MMP28 (ENSGEVG00005013548) TAF15 (ENSGEVG00005013474) RHBDD2 (ENSGEVG00005013445) POR (ENSGEVG00005013399) TMEM120A (ENSGEVG00005013274) STYXL1 (ENSGEVG00005013243) Abingdon island giant tortoise MODERN SPECIES 1418 ENSCABG00000004501 ENSCABG00000004499 ENSCABG00000004496 ENSCABG00000004495 ##13 ENSCABG00000004492 ##13 ENSCABG00000004438 ##13 ENSCABG00000004436 ##13 ENSCABG00000004432 ##13 CCL16 (ENSCABG00000004421) ##13 ENSCABG00000004416 ENSCABG00000004415 ENSCABG00000004413 ENSCABG00000004412 #18 ENSCABG00000004411 TMEM132E (ENSCABG00000004406) #19 LIG3 (ENSCABG00000002691) #22 RFFL (ENSCABG00000002669) #23 RAD51D (ENSCABG00000002447) #24 UNC45B (ENSCABG00000002434) #28 ENSCABG00000002431 ##29 PEX12 (ENSCABG00000002427) #35 AP2B1 (ENSCABG00000002423) #37 RASL10B (ENSCABG00000002413) ENSCABG00000002410 ENSCABG00000002408 MMP28 (ENSCABG00000002406) TAF15 (ENSCABG00000002398) ENSCABG00000002394 RHBDD2 (ENSCABG00000002383) POR (ENSCABG00000002381) TMEM120A (ENSCABG00000002380) Chinese turtle MODERN SPECIES 786 LIG3 (ENSPSIG00000014160) #22 RFFL (ENSPSIG00000014088) #23 RAD51D (ENSPSIG00000013822) #24 UNC45B (ENSPSIG00000013775) #28 ENSPSIG00000013351 ##29 ENSPSIG00000012539 ##29 PEX12 (ENSPSIG00000012532) #35 AP2B1 (ENSPSIG00000007490) #37 RASL10B (ENSPSIG00000007466) CWF19L1 (ENSPSIG00000006990) FZD9 (ENSPSIG00000001750) BAZ1B (ENSPSIG00000006503) ENSPSIG00000006444 MLXIPL (ENSPSIG00000015212) TBL2 (ENSPSIG00000014890) BCL7B (ENSPSIG00000014453) Anura ANCESTRAL SPECIES 511 ENSGT00940000156492 #22 ENSGT00390000012719.a #23 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000026266 ENSLLEG00000026191 GEMIN4 (ENSLLEG00000026148) ENSLLEG00000026106 TLCD3A (ENSLLEG00000026074) TMEM132E (ENSLLEG00000025662) #19 ENSLLEG00000025634 ENSLLEG00000025623 ENSLLEG00000025604 ENSLLEG00000025588 ENSLLEG00000025567 ENSLLEG00000025521 ENSLLEG00000025477 ENSLLEG00000025458 ENSLLEG00000025432 LIG3 (ENSLLEG00000024957) #22 RFFL (ENSLLEG00000024803) #23 ENSLLEG00000024768 ENSLLEG00000024722 ##13 NHS (ENSLLEG00000024460) ENSLLEG00000024417 REPS2 (ENSLLEG00000023965) ENSLLEG00000023712 ENSLLEG00000023636 RBBP7 (ENSLLEG00000022690) TXLNG (ENSLLEG00000022539) ENSLLEG00000022400 SYAP1 (ENSLLEG00000022016) ENSLLEG00000021976 ENSLLEG00000021145 ENSLLEG00000021092 Frog MODERN SPECIES 1 mcrip1 (ENSXETG00000042099) gcgr (ENSXETG00000005421) slc25a10 (ENSXETG00000019705) mrpl12 (ENSXETG00000040341) hgs (ENSXETG00000019701) arl16 (ENSXETG00000025485) slc16a3 (ENSXETG00000019700) ccdc57 (ENSXETG00000034430) fasn (ENSXETG00000019666) dus1l (ENSXETG00000019654) gps1 (ENSXETG00000019653) rfng (ENSXETG00000019657) card14 (ENSXETG00000019652) sgsh (ENSXETG00000019651) slc26a11 (ENSXETG00000019624) lig3 (ENSXETG00000019634) #22 endov (ENSXETG00000019623) nptx1 (ENSXETG00000019618) rptor (ENSXETG00000013410) chmp6 (ENSXETG00000013409) baiap2 (ENSXETG00000013408) aatk (ENSXETG00000013407) notum (ENSXETG00000003001) aspscr1 (ENSXETG00000003002) CENPX (ENSXETG00000034703) lrrc45 (ENSXETG00000003003) enpp7 (ENSXETG00000003004) afmid (ENSXETG00000003006) syngr2 (ENSXETG00000001322) tk1 (ENSXETG00000001323) dgke (ENSXETG00000001324) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1795 lig3 (ENSLACG00000001951) #22 ENSLACG00000006681 ALKBH4 (ENSLACG00000007646) ENSLACG00000008643 ENSLACG00000009912 ENSLACG00000010407 Coelacanth MODERN SPECIES 4199 ENSLACG00000000574 #22 Actinopterygii ANCESTRAL SPECIES 606 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b Neopterygii ANCESTRAL SPECIES 64 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000158605 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00950000184414 ENSGT01100000264661 Osteoglossocephalai ANCESTRAL SPECIES 7 ENSGT00940000162978.a.a.b ENSGT00940000166102 ENSGT00390000013187 ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT01060000249314 Clupeocephala ANCESTRAL SPECIES 10 ENSGT00390000006344 ENSGT00940000155772.a.b ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 Otomorpha ANCESTRAL SPECIES 245 ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 Otophysi ANCESTRAL SPECIES 27 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 Characiphysae ANCESTRAL SPECIES 56 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 Characiphysae_b ANCESTRAL SPECIES 56 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 Characoidei ANCESTRAL SPECIES 81 ENSGT00390000008162.e ENSGT00940000155838.f ENSGT00940000163149.b.d ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 Red-bellied piranha MODERN SPECIES 2 ENSPNAG00000015555 ENSPNAG00000015619 mis12 (ENSPNAG00000015631) derl2 (ENSPNAG00000015646) rabep1 (ENSPNAG00000015790) nup88 (ENSPNAG00000015864) ENSPNAG00000015881 prkrip1 (ENSPNAG00000015892) upk3b (ENSPNAG00000015903) rasa4 (ENSPNAG00000016000) CLIP2 (ENSPNAG00000016097) GTF2IRD1 (ENSPNAG00000016193) dtx2 (ENSPNAG00000003410) ENSPNAG00000016282 tmem132e (ENSPNAG00000016294) #19 lig3 (ENSPNAG00000016405) #22 rad51d (ENSPNAG00000016418) #24 tmem248 (ENSPNAG00000016443) DOC2B (ENSPNAG00000016487) SYMPK (ENSPNAG00000016505) ap2b1 (ENSPNAG00000016516) #37 pex12 (ENSPNAG00000016524) #35 orai2 (ENSPNAG00000016537) bckdk (ENSPNAG00000016545) lrwd1 (ENSPNAG00000016556) alkbh4 (ENSPNAG00000005629) polr2j (ENSPNAG00000016595) ncf1 (ENSPNAG00000016649) ENSPNAG00000016703 rcc1l (ENSPNAG00000005877) castor2 (ENSPNAG00000016806) Mexicana tetra MODERN SPECIES 18 derl2 (ENSAMXG00000032947) rabep1 (ENSAMXG00000007454) nup88 (ENSAMXG00000007459) ENSAMXG00000034957 prkrip1 (ENSAMXG00000032202) upk3b (ENSAMXG00000007471) rasa4 (ENSAMXG00000007473) CLIP2 (ENSAMXG00000007478) GTF2IRD1 (ENSAMXG00000007482) dtx2 (ENSAMXG00000007486) ENSAMXG00000037591 ENSAMXG00000033138 tmem132e (ENSAMXG00000007488) #19 ENSAMXG00000029351 ENSAMXG00000038139 lig3 (ENSAMXG00000007489) #22 rad51d (ENSAMXG00000007491) #24 tmem248 (ENSAMXG00000037321) ENSAMXG00000031572 ndufc2 (ENSAMXG00000029569) thrsp (ENSAMXG00000025561) guca1c (ENSAMXG00000041918) zgc:153184 (ENSAMXG00000039239) FNDC3A (ENSAMXG00000009916) ENSAMXG00000025560 RCBTB2 (ENSAMXG00000044125) lpar6a (ENSAMXG00000025558) ENSAMXG00000009911 LHFPL1 (ENSAMXG00000031038) ENSAMXG00000032042 cog6 (ENSAMXG00000009896) Electric eel MODERN SPECIES 76 ENSEEEG00000004123 wdr5 (ENSEEEG00000004129) brd3a (ENSEEEG00000004236) VAV2 (ENSEEEG00000004238) ENSEEEG00000004239 ENSEEEG00000004240 dnai1.2 (ENSEEEG00000004241) ENSEEEG00000004283 ENSEEEG00000004292 cd8a (ENSEEEG00000004294) ENSEEEG00000004298 pcsk1 (ENSEEEG00000004313) ENSEEEG00000004321 ENSEEEG00000004341 tmem132e (ENSEEEG00000004342) #19 lig3 (ENSEEEG00000004349) #22 rad51d (ENSEEEG00000004450) #24 tmem248 (ENSEEEG00000004451) ENSEEEG00000004452 DOC2B (ENSEEEG00000004454) ENSEEEG00000004457 castor2 (ENSEEEG00000004463) rcc1l (ENSEEEG00000004464) ncf1 (ENSEEEG00000004471) polr2j (ENSEEEG00000004474) alkbh4 (ENSEEEG00000004476) lrwd1 (ENSEEEG00000004478) bckdk (ENSEEEG00000004484) orai2 (ENSEEEG00000004524) pex12 (ENSEEEG00000004526) #35 ap2b1 (ENSEEEG00000004531) #37 Channel catfish MODERN SPECIES 20 upk3b (ENSIPUG00000023005) rasa4 (ENSIPUG00000023009) clip2 (ENSIPUG00000023046) gtf2ird1 (ENSIPUG00000023074) dtx2 (ENSIPUG00000023083) tmem132e (ENSIPUG00000023899) #19 ins (ENSIPUG00000023907) ENSIPUG00000023909 ENSIPUG00000023910 ENSIPUG00000023914 ENSIPUG00000023915 ENSIPUG00000023916 ENSIPUG00000023920 ENSIPUG00000023925 si:dkey-111e8.4 (ENSIPUG00000023927) lig3 (ENSIPUG00000023929) #22 rad51d (ENSIPUG00000023931) #24 tmem248 (ENSIPUG00000023933) DOC2B (ENSIPUG00000023936) gatsl2 (ENSIPUG00000023947) Wbscr16 (ENSIPUG00000023952) ncf1 (ENSIPUG00000023954) polr2j (ENSIPUG00000023960) alkbh4 (ENSIPUG00000023965) lrwd1 (ENSIPUG00000023966) bckdk (ENSIPUG00000023968) ENSIPUG00000023979 orai2 (ENSIPUG00000023980) pex12 (ENSIPUG00000023986) #35 ap2b1 (ENSIPUG00000023990) #37 rasl10b (ENSIPUG00000023998) Cyprinoidei ANCESTRAL SPECIES 37 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997.a ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 21 ENSGT00390000007799.c.a.a ENSGT00940000157662.g.a.g ENSGT00390000008162.e.a ENSGT00940000155838.f.c ENSGT00390000018665.w ENSGT00530000063156.a.a.a.d ENSGT00530000063743.b.c ENSGT00390000015063.d ENSGT00950000183012.B.a.e ENSGT00390000005003.f ENSGT00940000160149.i ENSGT00940000159426.m ENSGT00940000159414.c.b ENSGT00940000157641.m ENSGT00940000158479.d #19 ENSGT00940000156492.i #22 ENSGT00940000159095.i #24 ENSGT00940000153883.b.g ENSGT00940000156758.`b.a.a.b ENSGT00940000173997.a ENSGT00940000156758.`b.a.b ENSGT00390000006208.a.g ENSGT00940000157317.p ENSGT00940000160014.b ENSGT00550000074975.b ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A.c ENSGT00390000015354.c.b.b.t ENSGT00940000155206.m #37 ENSGT00940000160764.d Cyprininae_a ANCESTRAL SPECIES 75 ENSGT00940000157662.g.a.g ENSGT00390000008162.e.a ENSGT00940000155838.f.c ENSGT00390000018665.w ENSGT00530000063156.a.a.a.d ENSGT00530000063743.b.c ENSGT00390000015063.d ENSGT00950000183012.B.a.e ENSGT00390000005003.f ENSGT00940000153392.b.b.j ENSGT00940000160149.i ENSGT00940000159426.m ENSGT00940000159414.c.b ENSGT00940000157641.m ENSGT00940000158479.d #19 ENSGT00940000156492.i #22 ENSGT00940000159095.i.b #24 ENSGT00940000153883.b.g ENSGT00940000156758.`b.a.a.b ENSGT00940000173997.a ENSGT00940000156758.`b.a.b ENSGT00390000006208.a.g ENSGT00940000157317.p ENSGT00940000160014.b ENSGT00550000074975.b ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A.c ENSGT00390000015354.c.b.b.t ENSGT00390000016209.i #35 ENSGT00940000155206.m #37 Golden-line barbel MODERN SPECIES 94 lig3 (ENSSGRG00000038039) #22 rad51d (ENSSGRG00000037976) #24 tmem248 (ENSSGRG00000037975) ENSSGRG00000037911 castor2 (ENSSGRG00000037898) rcc1l (ENSSGRG00000037893) polr2j (ENSSGRG00000037887) alkbh4 (ENSSGRG00000037884) lrwd1 (ENSSGRG00000037883) bckdk (ENSSGRG00000037882) orai2 (ENSSGRG00000037881) pex12 (ENSSGRG00000037879) #35 ENSSGRG00000037878 ap2b1 (ENSSGRG00000032854) #37 RASL10B (ENSSGRG00000032813) ENSSGRG00000032812 Common carp reference MODERN SPECIES 7 derl2 (ENSCCRG00000053596) rabep1 (ENSCCRG00000029673) nup88 (ENSCCRG00000029664) ENSCCRG00000054828 prkrip1 (ENSCCRG00000018890) upk3b (ENSCCRG00000064656) rasa4 (ENSCCRG00000026526) ENSCCRG00000068514 ENSCCRG00000026679 ENSCCRG00000075577 dtx2 (ENSCCRG00000028202) ENSCCRG00000065084 ENSCCRG00000068351 ENSCCRG00000074686 tmem132e (ENSCCRG00000046437) #19 lig3 (ENSCCRG00000077154) #22 rad51d (ENSCCRG00000070560) #24 tmem248 (ENSCCRG00000028402) ENSCCRG00000058946 ENSCCRG00000025155 castor2 (ENSCCRG00000065176) rcc1l (ENSCCRG00000044998) ncf1 (ENSCCRG00000044938) polr2j (ENSCCRG00000044891) lrwd1 (ENSCCRG00000077882) bckdk (ENSCCRG00000067181) orai2 (ENSCCRG00000039011) pex12 (ENSCCRG00000044463) #35 ap2b1 (ENSCCRG00000042700) #37 RASL10B (ENSCCRG00000015525) ENSCCRG00000015509 Goldfish MODERN SPECIES 44 mboat4 (ENSCARG00000025204) zgc:114041 (ENSCARG00000025242) jak2b (ENSCARG00000025320) prlrb (ENSCARG00000025733) ENSCARG00000025751 cplx4b (ENSCARG00000025959) emb (ENSCARG00000025972) hint2 (ENSCARG00000026000) ENSCARG00000026061 ENSCARG00000026455 NAAA (ENSCARG00000026465) PPEF2 (ENSCARG00000026532) scarb2a (ENSCARG00000026639) ENSCARG00000026761 tmem132e (ENSCARG00000026778) #19 lig3 (ENSCARG00000026873) #22 tmem248 (ENSCARG00000027553) DOC2B (ENSCARG00000027572) ENSCARG00000027666 castor2 (ENSCARG00000027709) ncf1 (ENSCARG00000028087) polr2j (ENSCARG00000028159) lrwd1 (ENSCARG00000028165) bckdk (ENSCARG00000028228) orai2 (ENSCARG00000029497) RASL10B (ENSCARG00000029810) im:7138535 (ENSCARG00000029815) ENSCARG00000029881 ENSCARG00000031482 ENSCARG00000031507 SYMPK (ENSCARG00000031570) Cyprininae ANCESTRAL SPECIES 162 ENSGT00940000157662.g.a.h ENSGT00390000008162.e.b ENSGT00940000155838.f.d ENSGT00390000018665.x ENSGT00530000063156.a.a.a.c ENSGT00530000063743.b.d ENSGT00390000015063.c ENSGT00950000183012.B.a.f ENSGT00390000005003.e ENSGT00940000153392.b.b ENSGT00940000160149.j ENSGT00940000159426.n ENSGT00940000159414.c.a ENSGT00940000157641.n ENSGT00940000158479.c #19 ENSGT00940000156492.j #22 ENSGT00940000159095.j #24 ENSGT00940000153883.b.h ENSGT00940000156758.ab ENSGT00940000164249.b.a.b.a.a.k.b.a.b ENSGT00390000006208.a.h ENSGT00940000157317.o ENSGT00940000160014.a ENSGT00550000074975.a ENSGT01030000234646.A.d ENSGT00390000015354.c.b.b.s ENSGT00390000016209 #35 ENSGT00950000184414 ENSGT00940000155206.n #37 ENSGT00940000160764.c ENSGT00940000154849.a.e Goldfish MODERN SPECIES 23 cenatac (ENSCARG00000024061) ENSCARG00000022317 tlcd5b (ENSCARG00000022245) ENSCARG00000022208 mis12 (ENSCARG00000022196) derl2 (ENSCARG00000022190) rabep1 (ENSCARG00000020618) nup88 (ENSCARG00000020528) ENSCARG00000020518 prkrip1 (ENSCARG00000020510) rasa4 (ENSCARG00000019795) CLIP2 (ENSCARG00000018706) GTF2IRD1 (ENSCARG00000018662) dtx2 (ENSCARG00000018646) tmem132e (ENSCARG00000018627) #19 lig3 (ENSCARG00000018437) #22 rad51d (ENSCARG00000018365) #24 tmem248 (ENSCARG00000018347) ENSCARG00000018339 DOC2B (ENSCARG00000018302) ENSCARG00000018280 ENSCARG00000018267 castor2 (ENSCARG00000018235) rcc1l (ENSCARG00000018169) ncf1 (ENSCARG00000018119) alkbh4 (ENSCARG00000018109) ENSCARG00000018101 ENSCARG00000018095 bckdk (ENSCARG00000017894) orai2 (ENSCARG00000017831) pex12 (ENSCARG00000017825) #35 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000157662.g.a.h ENSGT00390000008162.e.b ENSGT00940000155838.f.d ENSGT00390000018665.x ENSGT00530000063156.a.a.a.c ENSGT00530000063743.b.d ENSGT00390000015063.c ENSGT00950000183012.B.a.f ENSGT00390000005003.e ENSGT00940000153392.b.b.i ENSGT00940000160149.j ENSGT00940000159426.n ENSGT00940000159414.c.a ENSGT00940000157641.n ENSGT00940000158479.c #19 ENSGT00940000156492.j #22 ENSGT00940000159095.j #24 ENSGT00940000153883.b.h ENSGT00940000156758.ab ENSGT00940000164249.b.a.b.a.a.k.b.a.b ENSGT00390000006208.a.h ENSGT00940000157317.o ENSGT00940000160014.a ENSGT00550000074975.a ENSGT01030000234646.A.d ENSGT00390000015354.c.b.b.s ENSGT00390000016209.j #35 ENSGT00950000184414 ENSGT00940000155206.n #37 ENSGT00940000160764.c ENSGT00940000154849.a.e Common carp reference MODERN SPECIES 15 ENSCCRG00000032620 mis12 (ENSCCRG00000064838) derl2 (ENSCCRG00000067955) rabep1 (ENSCCRG00000045844) nup88 (ENSCCRG00000030730) ENSCCRG00000082137 prkrip1 (ENSCCRG00000026506) upk3b (ENSCCRG00000026511) rasa4 (ENSCCRG00000026167) ENSCCRG00000026469 ENSCCRG00000028198 dtx2 (ENSCCRG00000031438) ENSCCRG00000069812 ENSCCRG00000035491 tmem132e (ENSCCRG00000082774) #19 lig3 (ENSCCRG00000053845) #22 rad51d (ENSCCRG00000007852) #24 tmem248 (ENSCCRG00000045259) ENSCCRG00000066524 ENSCCRG00000078764 ENSCCRG00000062611 ENSCCRG00000074614 ENSCCRG00000063378 castor2 (ENSCCRG00000061193) rcc1l (ENSCCRG00000025141) ncf1 (ENSCCRG00000024131) polr2j (ENSCCRG00000065810) alkbh4 (ENSCCRG00000024113) bckdk (ENSCCRG00000055540) orai2 (ENSCCRG00000071195) ENSCCRG00000071680 Golden-line barbel MODERN SPECIES 1732 lig3 (ENSSGRG00000017763) #22 rad51d (ENSSGRG00000018374) #24 rad51d (ENSSGRG00000018375) #24 tmem248 (ENSSGRG00000018376) ENSSGRG00000018377 zgc:136472 (ENSSGRG00000018378) ENSSGRG00000018381 ENSSGRG00000018382 saga (ENSSGRG00000018408) Zebrafish MODERN SPECIES 20 tlcd5b (ENSDARG00000035163) ENSDARG00000089643 mis12 (ENSDARG00000026454) derl2 (ENSDARG00000042401) rabep1 (ENSDARG00000059600) nup88 (ENSDARG00000003235) ENSDARG00000097055 prkrip1 (ENSDARG00000033126) upk3b (ENSDARG00000092872) rasa4 (ENSDARG00000029372) CLIP2 (ENSDARG00000059596) GTF2IRD1 (ENSDARG00000022203) dtx2 (ENSDARG00000032933) ENSDARG00000094771 tmem132e (ENSDARG00000090830) #19 lig3 (ENSDARG00000052553) #22 rad51d (ENSDARG00000026400) #24 tmem248 (ENSDARG00000018825) DOC2B (ENSDARG00000088293) ENSDARG00000044290 ENSDARG00000093734 castor2 (ENSDARG00000018985) rcc1l (ENSDARG00000059583) ncf1 (ENSDARG00000033735) polr2j (ENSDARG00000035146) alkbh4 (ENSDARG00000052247) lrwd1 (ENSDARG00000035147) bckdk (ENSDARG00000016904) orai2 (ENSDARG00000035148) pex12 (ENSDARG00000035149) #35 drll.3 (ENSDARG00000095635) Clupeiformes ANCESTRAL SPECIES 134 ENSGT00940000155838.f ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641.p ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00550000074975 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 Atlantic herring MODERN SPECIES 24 aspa (ENSCHAG00000013737) zgc:85789 (ENSCHAG00000013650) ENSCHAG00000013640 ENSCHAG00000013625 ENSCHAG00000013612 RSPH6A (ENSCHAG00000013599) napaa (ENSCHAG00000013445) ENSCHAG00000013417 prkrip1 (ENSCHAG00000013413) upk3b (ENSCHAG00000013408) rasa4 (ENSCHAG00000013042) CLIP2 (ENSCHAG00000012368) GTF2IRD1 (ENSCHAG00000012321) dtx2 (ENSCHAG00000012292) tmem132e (ENSCHAG00000012267) #19 lig3 (ENSCHAG00000010657) #22 rad51d (ENSCHAG00000010433) #24 tmem248 (ENSCHAG00000010393) DOC2B (ENSCHAG00000010284) ENSCHAG00000010241 castor2 (ENSCHAG00000010205) rcc1l (ENSCHAG00000010179) ncf1 (ENSCHAG00000010068) alkbh4 (ENSCHAG00000010050) lrwd1 (ENSCHAG00000009895) bckdk (ENSCHAG00000009844) orai2 (ENSCHAG00000009764) pex12 (ENSCHAG00000009753) #35 ap2b1 (ENSCHAG00000009463) #37 RASL10B (ENSCHAG00000009444) ENSCHAG00000009415 Euteleosteomorpha ANCESTRAL SPECIES 300 ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00940000173997 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 Protacanthopterygii ANCESTRAL SPECIES 44 ENSGT00390000009255 ENSGT00940000157126.f ENSGT00950000182818.C.b ENSGT00990000203615.b.b.a ENSGT00390000003924 ENSGT00390000008657 ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT00940000161093 ENSGT01030000234556.a.b.a ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758.w.a.a.b ENSGT00940000173997 ENSGT00940000156758.w.a.a.a ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00940000162993 ENSGT00390000006115 ENSGT00390000007799 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157627 ENSGT00390000012008.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 35 ENSGT00390000009554.h ENSGT00940000163875.a.b.b.b ENSGT01030000234556.a.b.a.g ENSGT00940000160149 ENSGT00940000159426.u.a ENSGT00940000159414.e ENSGT00940000157641.k ENSGT00940000158479.e #19 ENSGT00940000156492.k #22 ENSGT00940000159095 #24 ENSGT00940000153883.b.i ENSGT00940000156758.w.a.a.b ENSGT00940000173997 ENSGT00390000006208.a.i ENSGT00940000157317.m ENSGT00940000160014.d ENSGT00940000178427 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e ENSGT00390000007799 ENSGT00940000159111.j ENSGT00940000157662.g.a.b ENSGT00390000008162.e ENSGT00940000157627.e ENSGT00390000012008.a.c Salmoninae_a ANCESTRAL SPECIES 44 ENSGT00940000159519.h ENSGT01080000257365.b.a.b.a.b.i ENSGT00940000158893.r ENSGT00390000003924 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000008657 ENSGT00390000009554.g ENSGT00940000163875.a.b.b.a ENSGT00940000161093 ENSGT01030000234556.a.b.a.h ENSGT00940000160149 ENSGT00940000159426.u.a ENSGT00940000159414.e ENSGT00940000157641.k ENSGT00940000158479.e #19 ENSGT00940000156492.k #22 ENSGT00940000159095 #24 ENSGT00940000153883.b.i ENSGT00940000156758.w.a.a.b ENSGT00440000034248 ENSGT00940000156758.w.b ENSGT00940000173997 ENSGT00390000006208.a.i ENSGT00940000157317.m ENSGT00940000160014.d ENSGT00940000178427 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e ENSGT00390000006115 ENSGT00390000007799 ENSGT00940000159111.j ENSGT00940000157662.g.a.b Oncorhynchus ANCESTRAL SPECIES 41 ENSGT00950000182818.C.b ENSGT00940000159519.h ENSGT00940000158893.r ENSGT00390000003924 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000008657 ENSGT00390000009554.g ENSGT00940000163875.a.b.b.a ENSGT00940000161093 ENSGT01030000234556.a.b.a.h ENSGT00940000160149 ENSGT00940000159426.u.a ENSGT00940000159414.e ENSGT00940000157641.k ENSGT00940000158479.e #19 ENSGT00940000156492.k #22 ENSGT00940000159095 #24 ENSGT00940000153883.b.i ENSGT00940000156758.w.a.a.b ENSGT00940000173997 ENSGT00390000006208.a.i ENSGT00940000157317.m ENSGT00940000160014.d ENSGT00390000006115 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e ENSGT00940000178427 ENSGT00390000007799 ENSGT00940000159111.j ENSGT00940000157662.g.a.b ENSGT00390000008162.e ENSGT00940000157627.e Oncorhynchus_a ANCESTRAL SPECIES 43 ENSGT00950000182818.C.b ENSGT00940000159519.h ENSGT00940000158893.r ENSGT00390000003924 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000008657 ENSGT00390000009554.g ENSGT00940000163875.a.b.b.a ENSGT00940000161093 ENSGT01030000234556.a.b.a.h ENSGT00940000160149 ENSGT00940000159426.u.a ENSGT00940000159414.e ENSGT00940000157641.k ENSGT00940000158479.e #19 ENSGT00940000156492.k #22 ENSGT00940000159095 #24 ENSGT00940000153883.b.i ENSGT00940000156758.w.a.a.b ENSGT00940000173997 ENSGT00390000006208.a.i ENSGT00940000157317.m ENSGT00940000160014.d ENSGT00390000006115 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e ENSGT00940000178427 ENSGT00390000007799 ENSGT00940000159111.j ENSGT00970000193754.a.a ENSGT00940000157662.g.a.b ENSGT00390000008162.e Coho salmon MODERN SPECIES 20 ENSOKIG00005030752 dcps (ENSOKIG00005030740) ENSOKIG00005030701 emsy (ENSOKIG00005030547) ENSOKIG00005030502 KLHL35 (ENSOKIG00005030486) mpzl1l (ENSOKIG00005030439) ENSOKIG00005030424 ENSOKIG00005030414 rasa4 (ENSOKIG00005030293) CLIP2 (ENSOKIG00005029877) ENSOKIG00005029848 GTF2IRD1 (ENSOKIG00005029692) dtx2 (ENSOKIG00005029662) tmem132e (ENSOKIG00005029649) #19 lig3 (ENSOKIG00005027391) #22 rad51d (ENSOKIG00005027186) #24 tmem248 (ENSOKIG00005027144) DOC2B (ENSOKIG00005027083) ENSOKIG00005027070 ENSOKIG00005027056 castor2 (ENSOKIG00005026926) rcc1l (ENSOKIG00005026851) ncf1 (ENSOKIG00005026698) ENSOKIG00005026660 cenatac (ENSOKIG00005026650) GRIK4 (ENSOKIG00005026573) ENSOKIG00005026560 ARHGEF12 (ENSOKIG00005026411) tlcd5b (ENSOKIG00005026381) pou2f3 (ENSOKIG00005026363) Chinook salmon MODERN SPECIES 23 smtlb (ENSOTSG00005020603) ENSOTSG00005020604 ST3GAL4 (ENSOTSG00005020605) NHLRC3 (ENSOTSG00005020606) dcps (ENSOTSG00005020607) ENSOTSG00005020608 emsy (ENSOTSG00005020610) ENSOTSG00005020651 KLHL35 (ENSOTSG00005020652) mpzl1l (ENSOTSG00005020654) rasa4 (ENSOTSG00005020657) CLIP2 (ENSOTSG00005020659) ENSOTSG00005020663 dtx2 (ENSOTSG00005020666) tmem132e (ENSOTSG00005020667) #19 lig3 (ENSOTSG00005020684) #22 rad51d (ENSOTSG00005021622) #24 tmem248 (ENSOTSG00005036152) DOC2B (ENSOTSG00005036156) ENSOTSG00005036163 castor2 (ENSOTSG00005036168) rcc1l (ENSOTSG00005036220) ncf1 (ENSOTSG00005036261) ENSOTSG00005036308 ENSOTSG00005036310 cenatac (ENSOTSG00005036312) GRIK4 (ENSOTSG00005036320) ENSOTSG00005036324 ARHGEF12 (ENSOTSG00005036326) ENSOTSG00005036328 tlcd5b (ENSOTSG00005036330) Rainbow trout MODERN SPECIES 1 ENSOMYG00000031507 dcps (ENSOMYG00000031528) ENSOMYG00000031540 ENSOMYG00000031555 emsy (ENSOMYG00000031596) ENSOMYG00000031620 ENSOMYG00000031625 mpzl1l (ENSOMYG00000031639) rasa4 (ENSOMYG00000031716) ENSOMYG00000031945 ENSOMYG00000032157 dtx2 (ENSOMYG00000032170) ENSOMYG00000075704 ENSOMYG00000067746 tmem132e (ENSOMYG00000032176) #19 lig3 (ENSOMYG00000032273) #22 rad51d (ENSOMYG00000032521) #24 tmem248 (ENSOMYG00000032543) ENSOMYG00000032579 ENSOMYG00000054380 ENSOMYG00000032695 castor2 (ENSOMYG00000032718) rcc1l (ENSOMYG00000032735) ncf1 (ENSOMYG00000032820) ENSOMYG00000032927 cenatac (ENSOMYG00000032974) GRIK4 (ENSOMYG00000033071) ARHGEF12 (ENSOMYG00000033234) tlcd5b (ENSOMYG00000033341) pou2f3 (ENSOMYG00000033350) OAF (ENSOMYG00000033358) Salmo ANCESTRAL SPECIES 17 ENSGT00940000159519.h ENSGT01080000257365.b.a.b.a.b.i ENSGT00940000158893.r ENSGT00390000003924 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000008657 ENSGT00390000009554.g ENSGT00940000163875.a.b.b.a ENSGT00940000161093 ENSGT01030000234556.a.b.a.h ENSGT00940000160149 ENSGT00940000159426.u.a ENSGT00940000159414.e ENSGT00940000157641.k ENSGT00940000158479.e #19 ENSGT00940000156492.k #22 ENSGT00940000159095 #24 ENSGT00940000153883.b.i ENSGT00440000034248 ENSGT00940000156758.w.b ENSGT00940000173997 ENSGT00390000006208.a.i ENSGT00940000157317.m ENSGT00940000160014.d ENSGT00390000006115 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e ENSGT00390000007799 ENSGT00940000159111.j ENSGT00940000157662.g.a.b ENSGT00390000008162.e ENSGT00940000157627.e Atlantic salmon MODERN SPECIES 23 st3gal4 (ENSSSAG00000064145) dcps (ENSSSAG00000064142) ENSSSAG00000093459 ENSSSAG00000064139 NHLC3 (ENSSSAG00000064134) emsy (ENSSSAG00000061239) ENSSSAG00000061140 klhl35 (ENSSSAG00000061119) mpzl1l (ENSSSAG00000061098) rasa4 (ENSSSAG00000055962) ENSSSAG00000055776 ENSSSAG00000055690 dtx2 (ENSSSAG00000055664) ENSSSAG00000119884 tmem132e (ENSSSAG00000055628) #19 lig3 (ENSSSAG00000042916) #22 rad51d (ENSSSAG00000042688) #24 tmem248 (ENSSSAG00000042662) ENSSSAG00000042464 ENSSSAG00000115964 ENSSSAG00000106772 ENSSSAG00000088875 castor2 (ENSSSAG00000042315) rcc1l (ENSSSAG00000042111) ncf1 (ENSSSAG00000041940) zgc:194948 (ENSSSAG00000041918) ENSSSAG00000100142 cenatac (ENSSSAG00000041880) GRIK4 (ENSSSAG00000040220) ARHGEF12 (ENSSSAG00000039510) tlcd5b (ENSSSAG00000084363) River trout MODERN SPECIES 10 ST3GAL4 (ENSSTUG00000035717) dcps (ENSSTUG00000035724) ENSSTUG00000035738 NHLRC3 (ENSSTUG00000035748) ENSSTUG00000035771 emsy (ENSSTUG00000035781) ENSSTUG00000035853 KLHL35 (ENSSTUG00000035867) ENSSTUG00000035909 mpzl1l (ENSSTUG00000035916) rasa4 (ENSSTUG00000035955) CLIP2 (ENSSTUG00000036237) ENSSTUG00000036355 dtx2 (ENSSTUG00000036467) tmem132e (ENSSTUG00000036478) #19 lig3 (ENSSTUG00000036531) #22 rad51d (ENSSTUG00000038129) #24 tmem248 (ENSSTUG00000038161) ENSSTUG00000038191 ENSSTUG00000038201 ENSSTUG00000038223 castor2 (ENSSTUG00000038257) rcc1l (ENSSTUG00000038308) ncf1 (ENSSTUG00000038479) ENSSTUG00000038596 ENSSTUG00000038611 cenatac (ENSSTUG00000038625) GRIK4 (ENSSTUG00000038662) ARHGEF12 (ENSSTUG00000038759) tlcd5b (ENSSTUG00000039036) pou2f3 (ENSSTUG00000039049) Huchen MODERN SPECIES 106 rasa4 (ENSHHUG00000022592) CLIP2 (ENSHHUG00000022551) ENSHHUG00000022504 dtx2 (ENSHHUG00000022501) ENSHHUG00000022497 ENSHHUG00000022489 tmem132e (ENSHHUG00000022479) #19 lig3 (ENSHHUG00000022285) #22 rad51d (ENSHHUG00000022152) #24 tmem248 (ENSHHUG00000022132) DOC2B (ENSHHUG00000022073) ENSHHUG00000022060 castor2 (ENSHHUG00000022011) rcc1l (ENSHHUG00000021996) ncf1 (ENSHHUG00000021697) ENSHHUG00000021689 ENSHHUG00000021680 ENSHHUG00000021677 cenatac (ENSHHUG00000021669) ENSHHUG00000021565 ENSHHUG00000021550 ENSHHUG00000021494 Salmoninae ANCESTRAL SPECIES 936 ENSGT00940000159426.u.b ENSGT00940000159414.f ENSGT00940000157641.l ENSGT00940000158479.f #19 ENSGT00940000156492.l #22 ENSGT00940000153883.b.j ENSGT00940000156758.x Salmoninae_a ANCESTRAL SPECIES 199 ENSGT00390000009554.h ENSGT00940000163875.a.b.b.b ENSGT01030000234556.a.b.a.g ENSGT00940000159426.u.b ENSGT00940000159414.f ENSGT00940000157641.l ENSGT00940000158479.f #19 ENSGT00940000156492.l #22 ENSGT00940000153883.b.j ENSGT00940000156758.x Salmo ANCESTRAL SPECIES 44 ENSGT00940000159359.s.b ENSGT01030000234517.F.d ENSGT00950000183181.B.b.l.a.d ENSGT00940000156649.c.b.f ENSGT00940000164937.a.b.c ENSGT00940000157126.f.c ENSGT00990000203615.b.b.a ENSGT01090000260030.a.b.a.b.b.b.c.b ENSGT00390000009554.h ENSGT00940000163875.a.b.b.b ENSGT01030000234556.a.b.a.g ENSGT00940000159426.u.b ENSGT00940000159414.f ENSGT00940000157641.l ENSGT00940000158479.f #19 ENSGT00940000156492.l #22 ENSGT00940000153883.b.j ENSGT00940000156758.w.a.a.a ENSGT00390000006208.a.j ENSGT00940000157317.n ENSGT00940000160014.c ENSGT00940000162993 ENSGT00940000157662.g.a.a ENSGT00940000157627.f ENSGT00390000012008.a.d ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b ENSGT00940000158657.h ENSGT01100000263551.a.a.d ENSGT00440000039324.d ENSGT00390000006659.eb ENSGT00950000183127.c.b.d.a.a.b.j River trout MODERN SPECIES 6 ENSSTUG00000007019 ENSSTUG00000007021 ENSSTUG00000007036 KIRREL3 (ENSSTUG00000007047) kcnj1b (ENSSTUG00000007324) ENSSTUG00000007338 ENSSTUG00000007339 emsy (ENSSTUG00000007350) ENSSTUG00000007421 mpzl1l (ENSSTUG00000007425) CLIP2 (ENSSTUG00000007443) GTF2IRD1 (ENSSTUG00000007697) dtx2 (ENSSTUG00000007747) ENSSTUG00000007756 tmem132e (ENSSTUG00000007768) #19 ENSSTUG00000007797 #22 tmem248 (ENSSTUG00000007811) ENSSTUG00000007845 castor2 (ENSSTUG00000007893) rcc1l (ENSSTUG00000007903) ncf1 (ENSSTUG00000007926) ENSSTUG00000007942 foxr1 (ENSSTUG00000007945) ARHGEF12 (ENSSTUG00000007969) pou2f3 (ENSSTUG00000008413) OAF (ENSSTUG00000008445) ENSSTUG00000008452 slc37a2 (ENSSTUG00000008490) HEPACAM (ENSSTUG00000009770) nrgna (ENSSTUG00000009773) tiprl (ENSSTUG00000009775) Atlantic salmon MODERN SPECIES 4 ENSSSAG00000079223 ENSSSAG00000079234 ENSSSAG00000079275 ENSSSAG00000064211 ENSSSAG00000079704 ENSSSAG00000079708 emsy (ENSSSAG00000079717) ENSSSAG00000095201 ENSSSAG00000104741 mpzl1l (ENSSSAG00000079748) ENSSSAG00000079750 ENSSSAG00000079774 ENSSSAG00000108660 dtx2 (ENSSSAG00000088541) tmem132e (ENSSSAG00000079784) #19 ENSSSAG00000079788 #22 tmem248 (ENSSSAG00000079790) ENSSSAG00000110500 ENSSSAG00000095704 castor2 (ENSSSAG00000079805) ENSSSAG00000079823 SPD2A (ENSSSAG00000079828) ENSSSAG00000085859 ARHGEF12 (ENSSSAG00000079843) pou2f3 (ENSSSAG00000079857) OAF (ENSSSAG00000120874) ENSSSAG00000101698 slc37a2 (ENSSSAG00000079891) ENSSSAG00000079987 nrgna (ENSSSAG00000079991) tiprl (ENSSSAG00000079993) Northern pike MODERN SPECIES 6 dcps (ENSELUG00000019902) NHLRC3 (ENSELUG00000019886) emsy (ENSELUG00000019849) ENSELUG00000001552 KLHL35 (ENSELUG00000019778) ENSELUG00000026645 mpzl1l (ENSELUG00000019761) rasa4 (ENSELUG00000000863) ENSELUG00000027074 CLIP2 (ENSELUG00000019573) GTF2IRD1 (ENSELUG00000000843) dtx2 (ENSELUG00000019417) ENSELUG00000026555 tmem132e (ENSELUG00000019392) #19 ENSELUG00000002978 lig3 (ENSELUG00000019357) #22 rad51d (ENSELUG00000019271) #24 tmem248 (ENSELUG00000019215) DOC2B (ENSELUG00000019152) castor2 (ENSELUG00000019113) rcc1l (ENSELUG00000019073) ncf1 (ENSELUG00000019064) foxr1 (ENSELUG00000000806) cenatac (ENSELUG00000019020) GRIK4 (ENSELUG00000018995) ARHGEF12 (ENSELUG00000018877) tlcd5b (ENSELUG00000001057) pou2f3 (ENSELUG00000018667) OAF (ENSELUG00000018647) slc37a2 (ENSELUG00000018633) ENSELUG00000018593 Acanthomorphata ANCESTRAL SPECIES 14 ENSGT00820000127055.a.b ENSGT00940000154495.a.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000155545.b ENSGT00950000183155.a.a.a.b ENSGT00530000063405.b.f ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00920000150321 Cod MODERN SPECIES 20 picalma (ENSGMOG00000001140) ZPLD1 (ENSGMOG00000017836) ENSGMOG00000025426 alcama (ENSGMOG00000018059) CBLB (ENSGMOG00000017936) ENSGMOG00000031267 ENSGMOG00000017678 ENSGMOG00000017578 ENSGMOG00000017350 ENSGMOG00000034849 ENSGMOG00000017344 rcc1l (ENSGMOG00000017319) castor2 (ENSGMOG00000017310) ENSGMOG00000017287 tmem248 (ENSGMOG00000003359) ENSGMOG00000003307 #22 ENSGMOG00000003267 #24 tmem132e (ENSGMOG00000030984) #19 ENSGMOG00000013676 ENSGMOG00000013638 ENSGMOG00000013615 ENSGMOG00000031546 smfn (ENSGMOG00000006370) ENSGMOG00000036095 ENSGMOG00000006457 ENSGMOG00000006673 ENSGMOG00000006998 ENSGMOG00000022261 ENSGMOG00000023961 ENSGMOG00000028510 ENSGMOG00000006084 Euacanthomorphacea ANCESTRAL SPECIES 19 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c Pinecone sodierfish MODERN SPECIES 5 kcnj1b (ENSMMDG00005010321) ENSMMDG00005010320 rabep1 (ENSMMDG00005008501) mpzl1l (ENSMMDG00005008442) ENSMMDG00005008440 emsy (ENSMMDG00005008415) ENSMMDG00005008401 ENSMMDG00005008393 ENSMMDG00005008388 tlcd5b (ENSMMDG00005008386) rcc1l (ENSMMDG00005008269) castor2 (ENSMMDG00005008253) DOC2B (ENSMMDG00005008230) ENSMMDG00005008223 tmem248 (ENSMMDG00005008217) lig3 (ENSMMDG00005004307) #22 rad51d (ENSMMDG00005003981) #24 tmem132e (ENSMMDG00005003826) #19 dtx2 (ENSMMDG00005003811) GTF2IRD1 (ENSMMDG00005003802) CLIP2 (ENSMMDG00005003765) ENSMMDG00005003753 KIRREL3 (ENSMMDG00005003613) smfn (ENSMMDG00005003502) ENSMMDG00005003484 GRAMD1B (ENSMMDG00005003035) ENSMMDG00005003004 ENSMMDG00005002997 ENSMMDG00005002990 ENSMMDG00005002977 ENSMMDG00005002970 Percomorphaceae ANCESTRAL SPECIES 40 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Ovalentaria ANCESTRAL SPECIES 11 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Aplocheiloidei ANCESTRAL SPECIES 59 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 Mangrove rivulus MODERN SPECIES 120 ENSKMAG00000012258 FCHSD2 (ENSKMAG00000012329) foxred1 (ENSKMAG00000012368) kcnj1b (ENSKMAG00000012425) ENSKMAG00000012436 rabep1 (ENSKMAG00000012471) mpzl1l (ENSKMAG00000012544) ENSKMAG00000012560 emsy (ENSKMAG00000012608) ENSKMAG00000012690 tlcd5b (ENSKMAG00000012722) rcc1l (ENSKMAG00000012743) castor2 (ENSKMAG00000012826) DOC2B (ENSKMAG00000012901) tmem248 (ENSKMAG00000012967) lig3 (ENSKMAG00000013023) #22 rad51d (ENSKMAG00000013105) #24 tmem132e (ENSKMAG00000013144) #19 dtx2 (ENSKMAG00000013203) GTF2IRD1 (ENSKMAG00000013231) CLIP2 (ENSKMAG00000013315) cldn2 (ENSKMAG00000013422) rbm41 (ENSKMAG00000013436) klf8 (ENSKMAG00000013464) klf5l (ENSKMAG00000013486) pou4f4 (ENSKMAG00000013506) ncf1 (ENSKMAG00000013526) st6gal1 (ENSKMAG00000013570) gjb7 (ENSKMAG00000013594) ENSKMAG00000013629 st6gal1 (ENSKMAG00000013685) Turquoise killifish MODERN SPECIES 1620 kcnj1b (ENSNFUG00015005034) ENSNFUG00015005030 RABEP1 (ENSNFUG00015004848) ENSNFUG00015022801 MPZL1L (ENSNFUG00015022796) LRRC32 (ENSNFUG00015022791) ENSNFUG00015022790 C10H11ORF30 (ENSNFUG00015022778) ARHGEF12B (ENSNFUG00015022760) TMEM136 (ENSNFUG00015022755) rcc1l (ENSNFUG00015022719) GATSL2 (ENSNFUG00015022707) ENSNFUG00015022703 DOC2B (ENSNFUG00015022698) TMEM248 (ENSNFUG00015022695) LIG3 (ENSNFUG00015022579) #22 rad51d (ENSNFUG00015022543) #24 ENSNFUG00015022540 TMEM132E (ENSNFUG00015022531) #19 ENSNFUG00015022524 ENSNFUG00015022521 DTX2 (ENSNFUG00015022513) GTF2I (ENSNFUG00015022498) CLIP2 (ENSNFUG00015021996) cldn2 (ENSNFUG00015021943) ENSNFUG00015021940 RBM41 (ENSNFUG00015021937) klf8 (ENSNFUG00015021932) ENSNFUG00015021930 klf5l (ENSNFUG00015021927) ENSNFUG00015021923 Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 NAME_4 ANCESTRAL SPECIES 117 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Mummichog DUPLICATION Mummichog MODERN SPECIES 939 tmem248 (ENSFHEG00000006922) ENSFHEG00000006929 #22 ENSFHEG00000006965 #22 rad51d (ENSFHEG00000007010) #24 Mummichog MODERN SPECIES 939 tmem248 (ENSFHEG00000006922) ENSFHEG00000006929 #22 ENSFHEG00000006965 #22 rad51d (ENSFHEG00000007010) #24 Sheepshead minnow MODERN SPECIES 362 MGAT5B (ENSCVAG00000005190) DDX39A (ENSCVAG00000005146) rcc1l (ENSCVAG00000005022) castor2 (ENSCVAG00000004997) DOC2B (ENSCVAG00000004973) tmem248 (ENSCVAG00000004941) lig3 (ENSCVAG00000004924) #22 rad51d (ENSCVAG00000004865) #24 tmem132e (ENSCVAG00000004862) #19 Poeciliinae ANCESTRAL SPECIES 26 ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000178148 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Poecilia ANCESTRAL SPECIES 42 ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000178148 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 NAME_6 ANCESTRAL SPECIES 44 ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000178148 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E.cb.a ENSGT00950000183015.E.cb.b Amazon molly MODERN SPECIES 402 rabep1 (ENSPFOG00000003835) mpzl1l (ENSPFOG00000003741) ENSPFOG00000003717 emsy (ENSPFOG00000003557) ENSPFOG00000003224 tlcd5b (ENSPFOG00000003202) rcc1l (ENSPFOG00000003043) castor2 (ENSPFOG00000002821) ENSPFOG00000023519 DOC2B (ENSPFOG00000002635) tmem248 (ENSPFOG00000002569) lig3 (ENSPFOG00000002118) #22 rad51d (ENSPFOG00000001907) #24 tmem132e (ENSPFOG00000001690) #19 dtx2 (ENSPFOG00000001494) GTF2IRD1 (ENSPFOG00000001233) CLIP2 (ENSPFOG00000000967) cldn2 (ENSPFOG00000020532) rbm41 (ENSPFOG00000000848) klf8 (ENSPFOG00000000812) klf5l (ENSPFOG00000000768) pou4f4 (ENSPFOG00000000745) SPRY3 (ENSPFOG00000020531) ENSPFOG00000000714 zgc:123105 (ENSPFOG00000000664) ENSPFOG00000000612 ENSPFOG00000000566 Sailfin molly MODERN SPECIES 1335 mrpl23 (ENSPLAG00000023456) ENSPLAG00000023421 CPT1A (ENSPLAG00000023349) ENSPLAG00000023283 ENSPLAG00000023240 spty2d1 (ENSPLAG00000023232) tmem86a (ENSPLAG00000023224) tmem248 (ENSPLAG00000023205) lig3 (ENSPLAG00000000486) #22 rad51d (ENSPLAG00000023141) #24 tmem132e (ENSPLAG00000000483) #19 Guppy MODERN SPECIES 444 FCHSD2 (ENSPREG00000014659) foxred1 (ENSPREG00000014645) kcnj1b (ENSPREG00000014638) ENSPREG00000014624 rabep1 (ENSPREG00000014547) mpzl1l (ENSPREG00000014512) ENSPREG00000014506 emsy (ENSPREG00000014428) ENSPREG00000014395 tlcd5b (ENSPREG00000014386) ENSPREG00000014384 rcc1l (ENSPREG00000014358) castor2 (ENSPREG00000014328) DOC2B (ENSPREG00000014289) tmem248 (ENSPREG00000014167) lig3 (ENSPREG00000014115) #22 rad51d (ENSPREG00000014098) #24 tmem132e (ENSPREG00000014015) #19 dtx2 (ENSPREG00000013944) GTF2IRD1 (ENSPREG00000013881) CLIP2 (ENSPREG00000013806) cldn2 (ENSPREG00000013785) rbm41 (ENSPREG00000013759) klf8 (ENSPREG00000013729) klf5l (ENSPREG00000013698) pou4f4 (ENSPREG00000013684) SPRY3 (ENSPREG00000013673) ENSPREG00000013655 zgc:123105 (ENSPREG00000013641) ENSPREG00000013625 ENSPREG00000013606 Platyfish MODERN SPECIES 2 foxred1 (ENSXMAG00000011302) kcnj1b (ENSXMAG00000011316) ENSXMAG00000011318 rabep1 (ENSXMAG00000011320) mpzl1l (ENSXMAG00000011358) ENSXMAG00000028354 emsy (ENSXMAG00000011362) ENSXMAG00000011381 ENSXMAG00000021745 tlcd5b (ENSXMAG00000023906) ENSXMAG00000025697 rcc1l (ENSXMAG00000011400) castor2 (ENSXMAG00000028971) DOC2B (ENSXMAG00000026280) tmem248 (ENSXMAG00000025382) lig3 (ENSXMAG00000011457) #22 rad51d (ENSXMAG00000011477) #24 ENSXMAG00000027783 tmem132e (ENSXMAG00000028869) #19 dtx2 (ENSXMAG00000015255) GTF2IRD1 (ENSXMAG00000015294) CLIP2 (ENSXMAG00000015329) cldn2 (ENSXMAG00000024391) rbm41 (ENSXMAG00000015338) klf8 (ENSXMAG00000007445) klf5l (ENSXMAG00000027454) pou4f4 (ENSXMAG00000015351) SPRY3 (ENSXMAG00000020388) ENSXMAG00000025200 zgc:123105 (ENSXMAG00000027508) ENSXMAG00000015362 Oryzias ANCESTRAL SPECIES 14 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Oryzias_b ANCESTRAL SPECIES 53 ENSGT00940000157317 ENSGT00390000008162.e ENSGT00940000157662.g.a ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT01030000234556.a.b.a ENSGT00530000063743.b ENSGT00950000183012.B.a ENSGT00990000203615.b.b.a ENSGT00390000006114 ENSGT00510000046732.A.c ENSGT00530000064411.b ENSGT00530000063816.c.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Indian medaka MODERN SPECIES 4 ENSOMEG00000001625 MMP1 (ENSOMEG00000001620) acer3 (ENSOMEG00000001601) ENSOMEG00000001590 ENSOMEG00000001586 ENSOMEG00000001577 zgc:123105 (ENSOMEG00000001569) ENSOMEG00000001563 SPRY3 (ENSOMEG00000001555) pou4f4 (ENSOMEG00000001549) tlcd5b (ENSOMEG00000001543) rcc1l (ENSOMEG00000001534) castor2 (ENSOMEG00000001525) DOC2B (ENSOMEG00000001517) tmem248 (ENSOMEG00000001506) lig3 (ENSOMEG00000001498) #22 rad51d (ENSOMEG00000001490) #24 tmem132e (ENSOMEG00000001482) #19 ENSOMEG00000001477 dtx2 (ENSOMEG00000001472) GTF2IRD1 (ENSOMEG00000023836) CLIP2 (ENSOMEG00000023831) cldn2 (ENSOMEG00000023822) rbm41 (ENSOMEG00000023816) klf8 (ENSOMEG00000023806) klf5l (ENSOMEG00000023803) ENSOMEG00000023800 GPR119 (ENSOMEG00000023793) slc25a14 (ENSOMEG00000023789) btg4 (ENSOMEG00000023780) hnrnpaba (ENSOMEG00000023772) Javanese ricefish MODERN SPECIES 5 emsy (ENSOJAG00000020358) ENSOJAG00000020336 mpzl1l (ENSOJAG00000020322) rabep1 (ENSOJAG00000019803) ENSOJAG00000019733 kcnj1b (ENSOJAG00000019720) foxred1 (ENSOJAG00000019696) FCHSD2 (ENSOJAG00000019670) AQP11 (ENSOJAG00000019634) ENSOJAG00000019613 ENSOJAG00000019602 ENSOJAG00000019594 ENSOJAG00000019559 ENSOJAG00000019539 tmem248 (ENSOJAG00000019496) lig3 (ENSOJAG00000018520) #22 rad51d (ENSOJAG00000018456) #24 tmem132e (ENSOJAG00000018444) #19 dtx2 (ENSOJAG00000018414) GTF2IRD1 (ENSOJAG00000018222) CLIP2 (ENSOJAG00000017947) cldn2 (ENSOJAG00000017911) rbm41 (ENSOJAG00000017881) klf8 (ENSOJAG00000017854) klf5l (ENSOJAG00000017849) pou4f4 (ENSOJAG00000017838) SPRY3 (ENSOJAG00000017820) ENSOJAG00000017786 zgc:123105 (ENSOJAG00000017773) clk4b (ENSOJAG00000017760) GPR119 (ENSOJAG00000017726) Oryzias_a ANCESTRAL SPECIES 2 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114.e ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Chinese medaka MODERN SPECIES 609 ENSOSIG00000017378 emsy (ENSOSIG00000017380) tlcd5b (ENSOSIG00000017502) rcc1l (ENSOSIG00000017516) ENSOSIG00000017559 DOC2B (ENSOSIG00000017561) tmem248 (ENSOSIG00000017567) lig3 (ENSOSIG00000017591) #22 rad51d (ENSOSIG00000017699) #24 ENSOSIG00000017700 tmem132e (ENSOSIG00000017703) #19 ENSOSIG00000017707 dtx2 (ENSOSIG00000017710) GTF2IRD1 (ENSOSIG00000017715) CLIP2 (ENSOSIG00000017721) cldn2 (ENSOSIG00000017722) klf8 (ENSOSIG00000017729) klf5l (ENSOSIG00000017732) pou4f4 (ENSOSIG00000017733) SPRY3 (ENSOSIG00000017736) ENSOSIG00000017739 zgc:123105 (ENSOSIG00000017742) ENSOSIG00000017747 Japanese Medaka HdrR MODERN SPECIES 5 ENSORLG00000028843 ENSORLG00000028737 foxred1 (ENSORLG00000015079) kcnj1b (ENSORLG00000015086) ENSORLG00000029829 rabep1 (ENSORLG00000015131) mpzl1l (ENSORLG00000023228) ENSORLG00000023939 emsy (ENSORLG00000023771) ENSORLG00000022756 ENSORLG00000025239 rcc1l (ENSORLG00000015158) castor2 (ENSORLG00000015182) DOC2B (ENSORLG00000015189) tmem248 (ENSORLG00000015203) lig3 (ENSORLG00000015208) #22 rad51d (ENSORLG00000015239) #24 tmem132e (ENSORLG00000015249) #19 dtx2 (ENSORLG00000015263) GTF2IRD1 (ENSORLG00000015316) CLIP2 (ENSORLG00000015350) cldn2 (ENSORLG00000015354) rbm41 (ENSORLG00000015367) klf8 (ENSORLG00000015374) klf5l (ENSORLG00000015385) pou4f4 (ENSORLG00000015392) ENSORLG00000027499 SPRY3 (ENSORLG00000015407) ENSORLG00000023830 zgc:123105 (ENSORLG00000015422) ENSORLG00000015437 Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Pomacentridae ANCESTRAL SPECIES 57 ENSGT00990000203615.b.b.a ENSGT00390000006114 ENSGT00510000046732.A.c ENSGT00530000064411.b ENSGT00530000063816.c.a ENSGT00940000156251.b ENSGT00940000155350.h ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000156648.d ENSGT00390000015655.a.m.b ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00390000015354.c.b.b ENSGT01030000234646.A ENSGT00940000154248.b ENSGT00390000006344 ENSGT00940000155772.a.b ENSGT00940000155838.f ENSGT00390000007848.a.d ENSGT00940000164883 ENSGT01100000263551.a.a Bicolor damselfish MODERN SPECIES 541 tmem248 (ENSSPAG00000005752) ENSSPAG00000005778 lig3 (ENSSPAG00000005801) #22 rad51d (ENSSPAG00000005842) #24 ENSSPAG00000005861 tmem132e (ENSSPAG00000005879) #19 Pomacentridae_A ANCESTRAL SPECIES 65 ENSGT00990000203615.b.b.a ENSGT00390000006114 ENSGT00510000046732.A.c ENSGT00530000064411.b ENSGT00530000063816.c.a ENSGT00940000156251.b ENSGT00940000155350.h ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000156648.d ENSGT00390000015655.a.m.b ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00390000015354.c.b.b ENSGT01030000234646.A ENSGT00940000154248.b ENSGT00390000006344 ENSGT00940000155772.a.b ENSGT00940000155838.f ENSGT00390000007848.a.d ENSGT00940000164883 ENSGT00940000165075.a.a Amphiprion ANCESTRAL SPECIES 71 ENSGT00990000203615.b.b.a ENSGT00390000006114 ENSGT00510000046732.A.c ENSGT00530000064411.b ENSGT00530000063816.c.a ENSGT00940000156251.b ENSGT00940000155350.h ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000156648.d ENSGT00390000015655.a.m.b ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00390000015354.c.b.b ENSGT01030000234646.A ENSGT00940000154248.b ENSGT00390000006344 ENSGT00940000155772.a.b ENSGT00940000155838.f ENSGT00390000007848.a.d ENSGT00940000164883 ENSGT00940000165075.a.a Clown anemonefish MODERN SPECIES 1249 tmem248 (ENSAOCG00000024056) lig3 (ENSAOCG00000024040) #22 rad51d (ENSAOCG00000024012) #24 tmem132e (ENSAOCG00000024003) #19 dtx2 (ENSAOCG00000023995) GTF2IRD1 (ENSAOCG00000023988) ENSAOCG00000023975 PHLDB1 (ENSAOCG00000023947) ENSAOCG00000023819 ENSAOCG00000023798 zgc:113279 (ENSAOCG00000023789) ENSAOCG00000023773 ENSAOCG00000023758 ENSAOCG00000023746 zbtb44 (ENSAOCG00000023737) ADAMTS8 (ENSAOCG00000023726) ENSAOCG00000023714 Orange clownfish MODERN SPECIES 6 FCHSD2 (ENSAPEG00000011205) ENSAPEG00000011098 ENSAPEG00000011071 AQP11 (ENSAPEG00000011055) ENSAPEG00000011042 MYO7A (ENSAPEG00000010851) ompb (ENSAPEG00000010827) CAPN5 (ENSAPEG00000010775) setb (ENSAPEG00000010707) CUL5 (ENSAPEG00000010633) slc35f2 (ENSAPEG00000010522) rcc1l (ENSAPEG00000010470) castor2 (ENSAPEG00000010421) DOC2B (ENSAPEG00000010376) tmem248 (ENSAPEG00000010347) lig3 (ENSAPEG00000010317) #22 rad51d (ENSAPEG00000010305) #24 tmem132e (ENSAPEG00000010174) #19 dtx2 (ENSAPEG00000010133) GTF2IRD1 (ENSAPEG00000010030) CLIP2 (ENSAPEG00000009995) ENSAPEG00000009989 orai2 (ENSAPEG00000009978) bckdk (ENSAPEG00000009926) lrwd1 (ENSAPEG00000009743) alkbh4 (ENSAPEG00000009732) CBL (ENSAPEG00000009368) ENSAPEG00000009265 tmem120aa (ENSAPEG00000009197) styxl1 (ENSAPEG00000009163) ENSAPEG00000009142 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 57 ENSAPOG00000021626 COQ8A (ENSAPOG00000021640) STUM (ENSAPOG00000001019) ENSAPOG00000021661 ENSAPOG00000021668 IFT122 (ENSAPOG00000021814) exorh (ENSAPOG00000021829) PLXND1 (ENSAPOG00000021880) TMCC1 (ENSAPOG00000021915) trh (ENSAPOG00000021930) RBSN (ENSAPOG00000021975) mrps25 (ENSAPOG00000022005) nr2c2 (ENSAPOG00000022068) ENSAPOG00000000627 B3GALT4 (ENSAPOG00000022095) ENSAPOG00000022109 #22 rad51d (ENSAPOG00000022131) #24 tmem132e (ENSAPOG00000022142) #19 Spiny chromis MODERN SPECIES 261 cdc6 (ENSAPOG00000009859) WIPF2 (ENSAPOG00000009894) mrpl21 (ENSAPOG00000009928) zgc:77929 (ENSAPOG00000009941) npepps (ENSAPOG00000010028) mrpl45 (ENSAPOG00000010039) ENSAPOG00000010055 socs7 (ENSAPOG00000010066) sp2 (ENSAPOG00000010115) ENSAPOG00000010143 mrpl4 (ENSAPOG00000010156) ENSAPOG00000010222 tmem248 (ENSAPOG00000010257) lig3 (ENSAPOG00000010404) #22 Cichlidae ANCESTRAL SPECIES 4 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 22 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Haplochromini ANCESTRAL SPECIES 8 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Burton s mouthbrooder MODERN SPECIES 282 ENSHBUG00000013341 FCHSD2 (ENSHBUG00000013486) foxred1 (ENSHBUG00000013505) kcnj1b (ENSHBUG00000013510) ENSHBUG00000013532 rabep1 (ENSHBUG00000013663) mpzl1l (ENSHBUG00000013690) ENSHBUG00000013703 emsy (ENSHBUG00000013803) ENSHBUG00000013827 tlcd5b (ENSHBUG00000013844) rcc1l (ENSHBUG00000013891) castor2 (ENSHBUG00000013944) DOC2B (ENSHBUG00000013991) tmem248 (ENSHBUG00000014025) lig3 (ENSHBUG00000014105) #22 rad51d (ENSHBUG00000014121) #24 tmem132e (ENSHBUG00000014138) #19 dtx2 (ENSHBUG00000014152) GTF2IRD1 (ENSHBUG00000014185) CLIP2 (ENSHBUG00000014278) cldn2 (ENSHBUG00000014300) rbm41 (ENSHBUG00000014307) klf8 (ENSHBUG00000014321) klf5l (ENSHBUG00000014349) pou4f4 (ENSHBUG00000014363) SPRY3 (ENSHBUG00000014371) ENSHBUG00000014397 zgc:123105 (ENSHBUG00000014413) ENSHBUG00000014426 clk4b (ENSHBUG00000014440) Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b P. nyererei MODERN SPECIES 310 ENSPNYG00000011581 foxred1 (ENSPNYG00000011608) kcnj1b (ENSPNYG00000011686) ENSPNYG00000011703 rabep1 (ENSPNYG00000011756) ENSPNYG00000011844 mpzl1l (ENSPNYG00000011860) ENSPNYG00000011873 emsy (ENSPNYG00000011893) ENSPNYG00000011983 tlcd5b (ENSPNYG00000012027) rcc1l (ENSPNYG00000012045) castor2 (ENSPNYG00000012091) DOC2B (ENSPNYG00000012141) tmem248 (ENSPNYG00000012181) lig3 (ENSPNYG00000012229) #22 rad51d (ENSPNYG00000012287) #24 tmem132e (ENSPNYG00000012354) #19 ENSPNYG00000012399 dtx2 (ENSPNYG00000012412) GTF2IRD1 (ENSPNYG00000012449) CLIP2 (ENSPNYG00000012544) cldn2 (ENSPNYG00000012668) rbm41 (ENSPNYG00000012687) klf8 (ENSPNYG00000012735) klf5l (ENSPNYG00000012756) pou4f4 (ENSPNYG00000012775) SPRY3 (ENSPNYG00000012792) ENSPNYG00000012801 zgc:123105 (ENSPNYG00000012818) ENSPNYG00000012826 Haplochromini_B ANCESTRAL SPECIES 16 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Eastern happy MODERN SPECIES 1 foxred1 (ENSACLG00000023282) kcnj1b (ENSACLG00000023295) ENSACLG00000023304 rabep1 (ENSACLG00000023321) mpzl1l (ENSACLG00000023426) ENSACLG00000023438 emsy (ENSACLG00000023444) ENSACLG00000023550 tlcd5b (ENSACLG00000023621) rcc1l (ENSACLG00000023656) castor2 (ENSACLG00000023707) DOC2B (ENSACLG00000023750) ENSACLG00000023794 ENSACLG00000023808 tmem248 (ENSACLG00000023838) lig3 (ENSACLG00000023859) #22 rad51d (ENSACLG00000023916) #24 tmem132e (ENSACLG00000023926) #19 dtx2 (ENSACLG00000023976) ENSACLG00000023983 CLIP2 (ENSACLG00000024018) cldn2 (ENSACLG00000024120) rbm41 (ENSACLG00000024125) klf8 (ENSACLG00000024350) klf5l (ENSACLG00000024368) ENSACLG00000024400 pou4f4 (ENSACLG00000024407) SPRY3 (ENSACLG00000024416) ENSACLG00000024425 zgc:123105 (ENSACLG00000024469) ENSACLG00000024489 Zebra mbuna MODERN SPECIES 1092 ENSMZEG00005011134 FCHSD2 (ENSMZEG00005011163) foxred1 (ENSMZEG00005011217) kcnj1b (ENSMZEG00005011231) ENSMZEG00005011235 rabep1 (ENSMZEG00005011268) mpzl1l (ENSMZEG00005011307) ENSMZEG00005011320 emsy (ENSMZEG00005011328) ENSMZEG00005011352 tlcd5b (ENSMZEG00005011365) rcc1l (ENSMZEG00005011370) castor2 (ENSMZEG00005011388) DOC2B (ENSMZEG00005011406) tmem248 (ENSMZEG00005011420) lig3 (ENSMZEG00005011453) #22 rad51d (ENSMZEG00005011513) #24 tmem132e (ENSMZEG00005011524) #19 dtx2 (ENSMZEG00005011536) GTF2IRD1 (ENSMZEG00005011583) CLIP2 (ENSMZEG00005011621) cldn2 (ENSMZEG00005011668) rbm41 (ENSMZEG00005011676) klf8 (ENSMZEG00005011709) klf5l (ENSMZEG00005011722) pou4f4 (ENSMZEG00005011730) SPRY3 (ENSMZEG00005011737) ENSMZEG00005011743 zgc:123105 (ENSMZEG00005011754) ENSMZEG00005011765 ENSMZEG00005011772 Lyretail cichlid MODERN SPECIES 297 ENSNBRG00000013541 FCHSD2 (ENSNBRG00000013569) ENSNBRG00000013607 foxred1 (ENSNBRG00000013634) kcnj1b (ENSNBRG00000013734) rabep1 (ENSNBRG00000013749) mpzl1l (ENSNBRG00000013802) ENSNBRG00000013811 emsy (ENSNBRG00000013848) ENSNBRG00000013965 tlcd5b (ENSNBRG00000014071) rcc1l (ENSNBRG00000014086) castor2 (ENSNBRG00000014104) DOC2B (ENSNBRG00000014131) tmem248 (ENSNBRG00000014163) lig3 (ENSNBRG00000014195) #22 rad51d (ENSNBRG00000014252) #24 tmem132e (ENSNBRG00000014305) #19 dtx2 (ENSNBRG00000014339) GTF2IRD1 (ENSNBRG00000014348) CLIP2 (ENSNBRG00000014415) ENSNBRG00000014454 rbm41 (ENSNBRG00000014480) klf8 (ENSNBRG00000014536) klf5l (ENSNBRG00000014543) pou4f4 (ENSNBRG00000014563) SPRY3 (ENSNBRG00000014574) zgc:123105 (ENSNBRG00000014586) clk4b (ENSNBRG00000014617) GPR119 (ENSNBRG00000014650) slc25a14 (ENSNBRG00000014704) Nile tilapia MODERN SPECIES 1 ENSONIG00000038404 FCHSD2 (ENSONIG00000013349) foxred1 (ENSONIG00000013346) kcnj1b (ENSONIG00000013345) ENSONIG00000013344 rabep1 (ENSONIG00000013337) mpzl1l (ENSONIG00000013334) ENSONIG00000013333 emsy (ENSONIG00000013319) ENSONIG00000013306 tlcd5b (ENSONIG00000013304) rcc1l (ENSONIG00000013300) castor2 (ENSONIG00000013294) DOC2B (ENSONIG00000030282) tmem248 (ENSONIG00000013291) lig3 (ENSONIG00000013282) #22 rad51d (ENSONIG00000013277) #24 ENSONIG00000035009 tmem132e (ENSONIG00000013275) #19 dtx2 (ENSONIG00000013272) GTF2IRD1 (ENSONIG00000013267) CLIP2 (ENSONIG00000013264) cldn2 (ENSONIG00000040412) rbm41 (ENSONIG00000013260) klf8 (ENSONIG00000013257) klf5l (ENSONIG00000013256) pou4f4 (ENSONIG00000041937) SPRY3 (ENSONIG00000020890) ENSONIG00000013252 zgc:123105 (ENSONIG00000013248) ENSONIG00000043057 Midas cichlid MODERN SPECIES 344 FCHSD2 (ENSACIG00000013308) ENSACIG00000013347 foxred1 (ENSACIG00000013363) kcnj1b (ENSACIG00000013421) ENSACIG00000013430 rabep1 (ENSACIG00000013444) mpzl1l (ENSACIG00000013477) ENSACIG00000013488 emsy (ENSACIG00000013498) ENSACIG00000013556 tlcd5b (ENSACIG00000013657) rcc1l (ENSACIG00000013668) castor2 (ENSACIG00000013695) DOC2B (ENSACIG00000013720) tmem248 (ENSACIG00000013751) lig3 (ENSACIG00000013767) #22 rad51d (ENSACIG00000013804) #24 tmem132e (ENSACIG00000013851) #19 dtx2 (ENSACIG00000013875) GTF2IRD1 (ENSACIG00000013926) CLIP2 (ENSACIG00000013975) cldn2 (ENSACIG00000014016) ENSACIG00000014024 rbm41 (ENSACIG00000014038) klf8 (ENSACIG00000014078) klf5l (ENSACIG00000014095) pou4f4 (ENSACIG00000014137) Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Eupercaria ANCESTRAL SPECIES 26 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Tetraodontidae ANCESTRAL SPECIES 6 ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785.d ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000165884 ENSGT01060000248564.b.b Fugu MODERN SPECIES 6 smim8 (ENSTRUG00000026822) ddx51 (ENSTRUG00000012670) ENSTRUG00000030306 lrwd1 (ENSTRUG00000012493) CBL (ENSTRUG00000012330) ENSTRUG00000012139 tmem120aa (ENSTRUG00000012088) ENSTRUG00000012055 emsy (ENSTRUG00000011995) ENSTRUG00000011716 tlcd5b (ENSTRUG00000011690) rcc1l (ENSTRUG00000011571) castor2 (ENSTRUG00000011388) DOC2B (ENSTRUG00000011234) tmem248 (ENSTRUG00000011138) lig3 (ENSTRUG00000010827) #22 rad51d (ENSTRUG00000010643) #24 tmem132e (ENSTRUG00000010494) #19 ENSTRUG00000027613 ENSTRUG00000028244 dtx2 (ENSTRUG00000032722) dtx2 (ENSTRUG00000010312) ENSTRUG00000020847 cldn2 (ENSTRUG00000009854) rbm41 (ENSTRUG00000028542) klf8 (ENSTRUG00000009714) GTF2IRD1 (ENSTRUG00000010068) CLIP2 (ENSTRUG00000024540) cldn2 (ENSTRUG00000029798) rbm41 (ENSTRUG00000028823) klf8 (ENSTRUG00000030509) Tetraodon MODERN SPECIES 26 smim8 (ENSTNIG00000010282) ddx51 (ENSTNIG00000010281) ENSTNIG00000010280 lrwd1 (ENSTNIG00000010279) alkbh4 (ENSTNIG00000001293) CBL (ENSTNIG00000010278) MCAM (ENSTNIG00000010277) tmem120aa (ENSTNIG00000010276) ENSTNIG00000000439 emsy (ENSTNIG00000010275) ENSTNIG00000010274 tlcd5b (ENSTNIG00000000509) rcc1l (ENSTNIG00000010273) castor2 (ENSTNIG00000010272) DOC2B (ENSTNIG00000010271) lig3 (ENSTNIG00000010270) #22 rad51d (ENSTNIG00000010269) #24 tmem132e (ENSTNIG00000010268) #19 dtx2 (ENSTNIG00000004696) GTF2IRD1 (ENSTNIG00000004695) CLIP2 (ENSTNIG00000004694) cldn2 (ENSTNIG00000004693) rbm41 (ENSTNIG00000004692) klf8 (ENSTNIG00000004690) klf5l (ENSTNIG00000004691) krt15 (ENSTNIG00000004865) ENSTNIG00000004864 jupa (ENSTNIG00000004863) armh3 (ENSTNIG00000004862) ldb1b (ENSTNIG00000004861) ENSTNIG00000017524 Eupecaria_A ANCESTRAL SPECIES 25 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Ballan wrasse MODERN SPECIES 273 ENSLBEG00000025639 foxred1 (ENSLBEG00000025655) kcnj1b (ENSLBEG00000025676) ENSLBEG00000025688 ENSLBEG00000025701 rabep1 (ENSLBEG00000025724) mpzl1l (ENSLBEG00000025782) ENSLBEG00000025799 emsy (ENSLBEG00000025814) ENSLBEG00000025882 tlcd5b (ENSLBEG00000025986) rcc1l (ENSLBEG00000026004) castor2 (ENSLBEG00000026038) DOC2B (ENSLBEG00000026081) tmem248 (ENSLBEG00000026117) lig3 (ENSLBEG00000026219) #22 rad51d (ENSLBEG00000026302) #24 tmem132e (ENSLBEG00000026322) #19 Eupecaria_B ANCESTRAL SPECIES 25 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Eupecaria_C ANCESTRAL SPECIES 32 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Gilthead seabream MODERN SPECIES 4 foxred1 (ENSSAUG00010011936) ENSSAUG00010011932 kcnj1b (ENSSAUG00010011931) ENSSAUG00010011930 rabep1 (ENSSAUG00010010313) mpzl1l (ENSSAUG00010010262) ENSSAUG00010010257 emsy (ENSSAUG00010010248) tlcd5b (ENSSAUG00010010229) rcc1l (ENSSAUG00010009910) ENSSAUG00010009900 tmem248 (ENSSAUG00010009896) ENSSAUG00010009893 rad51d (ENSSAUG00010009890) #24 tmem132e (ENSSAUG00010009888) #19 lig3 (ENSSAUG00010009824) #22 ENSSAUG00010009817 dtx2 (ENSSAUG00010009816) GTF2IRD1 (ENSSAUG00010009806) CLIP2 (ENSSAUG00010009799) cldn2 (ENSSAUG00010009797) rbm41 (ENSSAUG00010009795) klf8 (ENSSAUG00010009793) klf5l (ENSSAUG00010009791) ENSSAUG00010009790 ENSSAUG00010009789 ENSSAUG00010009785 ENSSAUG00010009784 timd4 (ENSSAUG00010009779) ENSSAUG00010009776 pgap2 (ENSSAUG00010009771) Eupercaria_incertae_sedis ANCESTRAL SPECIES 20 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b European seabass MODERN SPECIES 4 ENSDLAG00005020900 ENSDLAG00005020844 ENSDLAG00005020696 ENSDLAG00005020682 ENSDLAG00005020674 ENSDLAG00005020223 mpzl1l (ENSDLAG00005020196) ENSDLAG00005020183 emsy (ENSDLAG00005020162) ENSDLAG00005019993 ENSDLAG00005019989 rcc1l (ENSDLAG00005019919) castor2 (ENSDLAG00005019867) ENSDLAG00005019763 tmem248 (ENSDLAG00005019738) lig3 (ENSDLAG00005017783) #22 ENSDLAG00005017663 #24 ENSDLAG00005017647 #19 ENSDLAG00005017633 ENSDLAG00005017604 ENSDLAG00005017419 cldn2 (ENSDLAG00005027599) rbm41 (ENSDLAG00005017375) klf8 (ENSDLAG00005027645) klf5l (ENSDLAG00005031919) pou4f4 (ENSDLAG00005030994) ENSDLAG00005032640 ENSDLAG00005017328 ENSDLAG00005017315 ENSDLAG00005017231 ENSDLAG00005017221 Large yellow croaker MODERN SPECIES 2 FCHSD2 (ENSLCRG00005000506) foxred1 (ENSLCRG00005000484) kcnj1b (ENSLCRG00005000480) ENSLCRG00005000479 rabep1 (ENSLCRG00005000289) ENSLCRG00005000220 mpzl1l (ENSLCRG00005000209) ENSLCRG00005000201 emsy (ENSLCRG00005000172) ENSLCRG00005000117 tlcd5b (ENSLCRG00005000100) rcc1l (ENSLCRG00005000088) castor2 (ENSLCRG00005015625) DOC2B (ENSLCRG00005015574) tmem248 (ENSLCRG00005015569) lig3 (ENSLCRG00005015409) #22 rad51d (ENSLCRG00005015405) #24 tmem132e (ENSLCRG00005015404) #19 dtx2 (ENSLCRG00005015402) GTF2IRD1 (ENSLCRG00005015399) CLIP2 (ENSLCRG00005015040) ENSLCRG00005015031 cldn2 (ENSLCRG00005015029) rbm41 (ENSLCRG00005015028) klf8 (ENSLCRG00005015027) klf5l (ENSLCRG00005015026) pou4f4 (ENSLCRG00005015025) SPRY3 (ENSLCRG00005015023) ENSLCRG00005015022 zgc:123105 (ENSLCRG00005015021) ENSLCRG00005015020 Perciformes ANCESTRAL SPECIES 26 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Perciformes_a ANCESTRAL SPECIES 28 ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT01000000215988 ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b ENSGT00940000165884 Pike perch MODERN SPECIES 22 FCHSD2 (ENSSLUG00000009890) foxred1 (ENSSLUG00000009775) kcnj1b (ENSSLUG00000009737) ENSSLUG00000009721 rabep1 (ENSSLUG00000007194) mpzl1l (ENSSLUG00000006930) ENSSLUG00000006923 emsy (ENSSLUG00000006888) ENSSLUG00000006853 tlcd5b (ENSSLUG00000006841) rcc1l (ENSSLUG00000006830) castor2 (ENSSLUG00000006802) ENSSLUG00000006794 DOC2B (ENSSLUG00000006783) tmem248 (ENSSLUG00000006767) lig3 (ENSSLUG00000006348) #22 rad51d (ENSSLUG00000006279) #24 tmem132e (ENSSLUG00000006130) #19 dtx2 (ENSSLUG00000006090) GTF2IRD1 (ENSSLUG00000006070) ENSSLUG00000006061 CLIP2 (ENSSLUG00000005434) cldn2 (ENSSLUG00000005340) rbm41 (ENSSLUG00000005317) klf8 (ENSSLUG00000005272) klf5l (ENSSLUG00000005237) pou4f4 (ENSSLUG00000005221) SPRY3 (ENSSLUG00000018768) zgc:123105 (ENSSLUG00000018759) clk4b (ENSSLUG00000018549) GPR119 (ENSSLUG00000018533) Cottioidei ANCESTRAL SPECIES 70 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 Lumpfish MODERN SPECIES 5 USP28 (ENSCLMG00005002496) orai2 (ENSCLMG00005002492) bckdk (ENSCLMG00005002325) lrwd1 (ENSCLMG00005002323) alkbh4 (ENSCLMG00005002322) CBL (ENSCLMG00005002297) ENSCLMG00005002171 tmem120aa (ENSCLMG00005001598) styxl1 (ENSCLMG00005001379) ENSCLMG00005021552 ENSCLMG00005021551 rcc1l (ENSCLMG00005021550) castor2 (ENSCLMG00005021549) DOC2B (ENSCLMG00005021546) tmem248 (ENSCLMG00005021545) lig3 (ENSCLMG00005020771) #22 rad51d (ENSCLMG00005020746) #24 tmem132e (ENSCLMG00005020745) #19 ENSCLMG00005020744 dtx2 (ENSCLMG00005020742) GTF2IRD1 (ENSCLMG00005020740) CLIP2 (ENSCLMG00005020734) zgc:123105 (ENSCLMG00005020732) ENSCLMG00005020730 pou4f4 (ENSCLMG00005020729) klf5l (ENSCLMG00005020727) klf8 (ENSCLMG00005020725) rbm41 (ENSCLMG00005020724) cldn2 (ENSCLMG00005020723) sar1b (ENSCLMG00005020721) SEC24A (ENSCLMG00005019066) Stickleback MODERN SPECIES 7 AQP11 (ENSGACG00000020861) ENSGACG00000020860 ENSGACG00000020859 FCHSD2 (ENSGACG00000020858) foxred1 (ENSGACG00000020857) ENSGACG00000020856 rabep1 (ENSGACG00000020855) ENSGACG00000020854 emsy (ENSGACG00000020853) ENSGACG00000020852 tlcd5b (ENSGACG00000020851) rcc1l (ENSGACG00000020850) castor2 (ENSGACG00000020849) DOC2B (ENSGACG00000020848) tmem248 (ENSGACG00000020847) lig3 (ENSGACG00000020846) #22 rad51d (ENSGACG00000020845) #24 GTF2IRD1 (ENSGACG00000020844) CLIP2 (ENSGACG00000020843) rbm41 (ENSGACG00000020842) klf5l (ENSGACG00000020841) pou4f4 (ENSGACG00000020840) ENSGACG00000020839 KLHL10 (ENSGACG00000020838) zgc:123105 (ENSGACG00000020837) clk4b (ENSGACG00000020836) GPR119 (ENSGACG00000020835) cldn2 (ENSGACG00000020834) ENSGACG00000020833 slc25a14 (ENSGACG00000020832) btg4 (ENSGACG00000020831) Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Anabantaria ANCESTRAL SPECIES 13 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Anabantoidei ANCESTRAL SPECIES 12 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Climbing perch MODERN SPECIES 5 ENSATEG00000023296 ENSATEG00000023272 ENSATEG00000023255 ENSATEG00000023244 ENSATEG00000023239 ENSATEG00000023217 mpzl1l (ENSATEG00000029159) ENSATEG00000023203 emsy (ENSATEG00000023194) ENSATEG00000026928 ENSATEG00000023177 rcc1l (ENSATEG00000023157) castor2 (ENSATEG00000023144) ENSATEG00000023135 tmem248 (ENSATEG00000023124) ENSATEG00000023092 #22 ENSATEG00000023087 #24 ENSATEG00000023074 #19 ENSATEG00000023058 ENSATEG00000027940 ENSATEG00000022547 ENSATEG00000023046 ENSATEG00000023003 cldn2 (ENSATEG00000022978) rbm41 (ENSATEG00000022968) klf8 (ENSATEG00000022946) klf5l (ENSATEG00000022909) pou4f4 (ENSATEG00000022899) ENSATEG00000028438 ENSATEG00000022867 ENSATEG00000022850 Siamese fighting fish MODERN SPECIES 5 FCHSD2 (ENSBSLG00000015745) foxred1 (ENSBSLG00000015901) kcnj1b (ENSBSLG00000015983) ENSBSLG00000015986 rabep1 (ENSBSLG00000016006) mpzl1l (ENSBSLG00000016417) ENSBSLG00000016421 emsy (ENSBSLG00000016423) ENSBSLG00000016441 tlcd5b (ENSBSLG00000016467) rcc1l (ENSBSLG00000016472) castor2 (ENSBSLG00000016483) DOC2B (ENSBSLG00000016488) ENSBSLG00000016500 tmem248 (ENSBSLG00000016504) lig3 (ENSBSLG00000016516) #22 rad51d (ENSBSLG00000016721) #24 tmem132e (ENSBSLG00000016891) #19 dtx2 (ENSBSLG00000016964) GTF2IRD1 (ENSBSLG00000017004) CLIP2 (ENSBSLG00000017162) cldn2 (ENSBSLG00000017430) rbm41 (ENSBSLG00000017440) klf8 (ENSBSLG00000017461) klf5l (ENSBSLG00000017485) pou4f4 (ENSBSLG00000017497) SPRY3 (ENSBSLG00000017509) ENSBSLG00000017525 zgc:123105 (ENSBSLG00000017557) ENSBSLG00000017573 clk4b (ENSBSLG00000017587) Zig-zag eel MODERN SPECIES 5 ENSMAMG00000001547 ENSMAMG00000001495 ENSMAMG00000001452 ENSMAMG00000001430 ENSMAMG00000001418 ENSMAMG00000001354 mpzl1l (ENSMAMG00000027186) ENSMAMG00000026881 emsy (ENSMAMG00000001261) ENSMAMG00000001216 ENSMAMG00000001187 rcc1l (ENSMAMG00000001100) castor2 (ENSMAMG00000001064) ENSMAMG00000001008 tmem248 (ENSMAMG00000026845) ENSMAMG00000000900 #22 ENSMAMG00000000850 #24 ENSMAMG00000000833 #19 ENSMAMG00000000774 ENSMAMG00000000721 ENSMAMG00000000615 cldn2 (ENSMAMG00000000588) rbm41 (ENSMAMG00000000581) klf8 (ENSMAMG00000000578) klf5l (ENSMAMG00000000552) pou4f4 (ENSMAMG00000000528) ENSMAMG00000000513 ENSMAMG00000000493 ENSMAMG00000000459 ENSMAMG00000000368 ENSMAMG00000000366 Carangaria ANCESTRAL SPECIES 16 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426.p ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Carangaria_A ANCESTRAL SPECIES 8 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426.p ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Seriola ANCESTRAL SPECIES 2 ENSGT00530000064411.b ENSGT00510000046732.A.c.m ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426.p ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00950000183015.E ENSGT00940000159722 Greater amberjack MODERN SPECIES 15 ENSSDUG00000007741 FCHSD2 (ENSSDUG00000007822) foxred1 (ENSSDUG00000007926) kcnj1b (ENSSDUG00000007971) ENSSDUG00000007984 rabep1 (ENSSDUG00000008003) mpzl1l (ENSSDUG00000008060) ENSSDUG00000008067 emsy (ENSSDUG00000008095) ENSSDUG00000008245 tlcd5b (ENSSDUG00000008328) rcc1l (ENSSDUG00000008345) castor2 (ENSSDUG00000008391) DOC2B (ENSSDUG00000008423) tmem248 (ENSSDUG00000008448) lig3 (ENSSDUG00000008477) #22 rad51d (ENSSDUG00000008515) #24 tmem132e (ENSSDUG00000008532) #19 dtx2 (ENSSDUG00000008583) GTF2IRD1 (ENSSDUG00000008617) CLIP2 (ENSSDUG00000008687) cldn2 (ENSSDUG00000008792) rbm41 (ENSSDUG00000008808) klf8 (ENSSDUG00000008823) klf5l (ENSSDUG00000008842) pou4f4 (ENSSDUG00000008880) SPRY3 (ENSSDUG00000008888) ENSSDUG00000008899 zgc:123105 (ENSSDUG00000008926) ENSSDUG00000008958 clk4b (ENSSDUG00000008980) Yellowtail amberjack MODERN SPECIES 3202 FCHSD2 (ENSSLDG00000003884) ENSSLDG00000003849 foxred1 (ENSSLDG00000003787) kcnj1b (ENSSLDG00000003772) ENSSLDG00000003751 rabep1 (ENSSLDG00000003669) mpzl1l (ENSSLDG00000003637) ENSSLDG00000003630 emsy (ENSSLDG00000003313) ENSSLDG00000003171 tlcd5b (ENSSLDG00000003152) rcc1l (ENSSLDG00000003094) castor2 (ENSSLDG00000003053) DOC2B (ENSSLDG00000002982) tmem248 (ENSSLDG00000002944) lig3 (ENSSLDG00000002837) #22 rad51d (ENSSLDG00000002734) #24 tmem132e (ENSSLDG00000002704) #19 dtx2 (ENSSLDG00000002677) GTF2IRD1 (ENSSLDG00000002437) CLIP2 (ENSSLDG00000002285) cldn2 (ENSSLDG00000002249) rbm41 (ENSSLDG00000002232) klf8 (ENSSLDG00000002215) klf5l (ENSSLDG00000002204) pou4f4 (ENSSLDG00000002179) SPRY3 (ENSSLDG00000002157) ENSSLDG00000002126 zgc:123105 (ENSSLDG00000002095) ENSSLDG00000002086 clk4b (ENSSLDG00000002058) Barramundi perch MODERN SPECIES 310 rcc1l (ENSLCAG00010007820) castor2 (ENSLCAG00010007811) DOC2B (ENSLCAG00010007803) tmem248 (ENSLCAG00010007796) lig3 (ENSLCAG00010007630) #22 rad51d (ENSLCAG00010007590) #24 tmem132e (ENSLCAG00010007571) #19 ENSLCAG00010007563 dtx2 (ENSLCAG00010007557) GTF2IRD1 (ENSLCAG00010007548) CLIP2 (ENSLCAG00010007543) Pleuronectoidei ANCESTRAL SPECIES 32 ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a ENSGT00950000183012.B.a ENSGT00530000063743.b ENSGT01030000234556.a.b.a ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00940000157662.g.a ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000158479 #19 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426.p ENSGT00940000160785 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b ENSGT00390000000141 ENSGT00390000000537.y ENSGT00940000159722 ENSGT01060000248564.b.b Turbot MODERN SPECIES 16 ENSSMAG00000015221 ENSSMAG00000015191 ENSSMAG00000015180 ENSSMAG00000015173 ENSSMAG00000015049 mpzl1l (ENSSMAG00000015032) ENSSMAG00000032956 emsy (ENSSMAG00000015001) ENSSMAG00000035998 ENSSMAG00000014991 rcc1l (ENSSMAG00000014964) castor2 (ENSSMAG00000031872) ENSSMAG00000024921 ENSSMAG00000014938 tmem248 (ENSSMAG00000014905) ENSSMAG00000014823 #22 ENSSMAG00000014791 #24 ENSSMAG00000014753 #19 ENSSMAG00000014709 ENSSMAG00000014686 cldn2 (ENSSMAG00000014506) rbm41 (ENSSMAG00000014485) klf8 (ENSSMAG00000031788) klf5l (ENSSMAG00000014441) pou4f4 (ENSSMAG00000027160) ENSSMAG00000014223 ENSSMAG00000014180 ENSSMAG00000014153 ENSSMAG00000014088 ENSSMAG00000014051 ENSSMAG00000014033 Tongue sole MODERN SPECIES 10 ENSCSEG00000015171 FCHSD2 (ENSCSEG00000015081) foxred1 (ENSCSEG00000015059) kcnj1b (ENSCSEG00000015056) ENSCSEG00000015046 rabep1 (ENSCSEG00000015015) mpzl1l (ENSCSEG00000014998) ENSCSEG00000014996 emsy (ENSCSEG00000014978) ENSCSEG00000014864 tlcd5b (ENSCSEG00000014847) rcc1l (ENSCSEG00000014772) castor2 (ENSCSEG00000014753) DOC2B (ENSCSEG00000014740) tmem248 (ENSCSEG00000014724) lig3 (ENSCSEG00000014666) #22 RAD51D (ENSCSEG00000014639) #24 ENSCSEG00000014634 ENSCSEG00000014628 f11r.1 (ENSCSEG00000014619) ENSCSEG00000014608 ABCG4 (ENSCSEG00000014580) kat5b (ENSCSEG00000014541) dpagt1 (ENSCSEG00000014524) ENSCSEG00000014517 SIPA1 (ENSCSEG00000014507) SPTBN2 (ENSCSEG00000014336) scn4bb (ENSCSEG00000014311) mpzl2b (ENSCSEG00000014304) TAGLN (ENSCSEG00000014292) gjd1a (ENSCSEG00000014286) Tiger tail seahorse MODERN SPECIES 37 GPR119 (ENSHCOG00000009445) clk4b (ENSHCOG00000009500) ENSHCOG00000009521 zgc:123105 (ENSHCOG00000009544) ENSHCOG00000009564 SPRY3 (ENSHCOG00000009579) pou4f4 (ENSHCOG00000009594) klf5l (ENSHCOG00000009600) rbm41 (ENSHCOG00000009614) cldn2 (ENSHCOG00000009627) CLIP2 (ENSHCOG00000009815) GTF2IRD1 (ENSHCOG00000009976) dtx2 (ENSHCOG00000009988) tmem132e (ENSHCOG00000010022) #19 rad51d (ENSHCOG00000000315) #24 lig3 (ENSHCOG00000010086) #22 ENSHCOG00000010100 tmem248 (ENSHCOG00000010130) DOC2B (ENSHCOG00000010176) castor2 (ENSHCOG00000010211) ENSHCOG00000010232 ppm1e (ENSHCOG00000010415) SMG8 (ENSHCOG00000010432) KCNJ15 (ENSHCOG00000010438) vps26c (ENSHCOG00000010462) ENSHCOG00000010473 rabgef1 (ENSHCOG00000000328) KCNJ6 (ENSHCOG00000010531) kctd7 (ENSHCOG00000010553) pgrmc1 (ENSHCOG00000010562) rab24 (ENSHCOG00000010591) Osteoglossiformes ANCESTRAL SPECIES 27 ENSGT00940000162978.a.a.b ENSGT00940000166102 ENSGT00390000013187 ENSGT00390000018665 ENSGT00530000063156.a.a.a ENSGT00530000063743.b ENSGT00390000015063 ENSGT00950000183012.B.a ENSGT00390000005003 ENSGT00940000153392.b.b ENSGT00940000160149 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000158479 #19 ENSGT00940000156492 #22 ENSGT00940000159095 #24 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000160014 ENSGT00940000164393 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00390000016209 #35 ENSGT00940000155206 #37 ENSGT00940000160764 ENSGT01060000249314 P. kingsleyae MODERN SPECIES 547 ENSPKIG00000010733 ENSPKIG00000010767 PCDH1 (ENSPKIG00000010840) lig3 (ENSPKIG00000010887) #22 rad51d (ENSPKIG00000010933) #24 tmem248 (ENSPKIG00000010961) ENSPKIG00000010995 Asian bonytongue MODERN SPECIES 17 ftr83 (ENSSFOG00015002595) ftr82 (ENSSFOG00015002612) ift22 (ENSSFOG00015002640) mis12 (ENSSFOG00015002648) derl2 (ENSSFOG00015002652) rabep1 (ENSSFOG00015002695) nup88 (ENSSFOG00015002786) ENSSFOG00015002836 prkrip1 (ENSSFOG00015002847) upk3b (ENSSFOG00015027271) rasa4 (ENSSFOG00015002894) CLIP2 (ENSSFOG00015002997) GTF2IRD1 (ENSSFOG00015003076) dtx2 (ENSSFOG00015025780) tmem132e (ENSSFOG00015003128) #19 lig3 (ENSSFOG00015003139) #22 rad51d (ENSSFOG00015003182) #24 tmem248 (ENSSFOG00015029199) DOC2B (ENSSFOG00015003225) castor2 (ENSSFOG00015003277) rcc1l (ENSSFOG00015003321) ncf1 (ENSSFOG00015003339) ENSSFOG00015027446 alkbh4 (ENSSFOG00015003376) lrwd1 (ENSSFOG00015003398) bckdk (ENSSFOG00015003411) orai2 (ENSSFOG00015028747) pex12 (ENSSFOG00015003439) #35 ap2b1 (ENSSFOG00015003461) #37 RASL10B (ENSSFOG00015003561) ENSSFOG00015032719 Spotted gar MODERN SPECIES 661 ift22 (ENSLOCG00000002416) derl2 (ENSLOCG00000002403) rabep1 (ENSLOCG00000002386) nup88 (ENSLOCG00000002368) ENSLOCG00000002350 prkrip1 (ENSLOCG00000002331) rasa4 (ENSLOCG00000002287) ENSLOCG00000002276 ENSLOCG00000002256 dtx2 (ENSLOCG00000002231) ENSLOCG00000002222 GTF2IRD1 (ENSLOCG00000002184) CLIP2 (ENSLOCG00000002159) ENSLOCG00000017870 tmem132e (ENSLOCG00000002145) #19 lig3 (ENSLOCG00000002087) #22 ENSLOCG00000002059 rad51d (ENSLOCG00000002045) #24 tmem248 (ENSLOCG00000002034) ENSLOCG00000002023 DOC2B (ENSLOCG00000002007) ENSLOCG00000001991 ENSLOCG00000001977 castor2 (ENSLOCG00000001947) rcc1l (ENSLOCG00000001933) ncf1 (ENSLOCG00000001899) polr2j (ENSLOCG00000001885) alkbh4 (ENSLOCG00000001872) lrwd1 (ENSLOCG00000001842) bckdk (ENSLOCG00000001821) orai2 (ENSLOCG00000001815) Reedfish MODERN SPECIES 16 cuedc1b (ENSECRG00000006496) mrps23 (ENSECRG00000006507) msi2b (ENSECRG00000006519) akap1b (ENSECRG00000006534) NF1 (ENSECRG00000006590) OMG (ENSECRG00000006693) wsb1 (ENSECRG00000006725) KSR1 (ENSECRG00000006778) ENSECRG00000006838 ENSECRG00000006854 nos2a (ENSECRG00000006882) lyrm9 (ENSECRG00000006912) nlk2 (ENSECRG00000006920) ENSECRG00000006938 tmem132e (ENSECRG00000006966) #19 lig3 (ENSECRG00000006992) #22 ENSECRG00000007013 rad51d (ENSECRG00000007059) #24 tmem248 (ENSECRG00000007133) ENSECRG00000007154 DOC2B (ENSECRG00000007167) CLIP2 (ENSECRG00000007187) ENSECRG00000007215 GTF2I (ENSECRG00000007237) ENSECRG00000007294 dtx2 (ENSECRG00000007309) ENSECRG00000007324 ENSECRG00000007337 rasa4 (ENSECRG00000007351) polr2j (ENSECRG00000007380) alkbh4 (ENSECRG00000007389) Elephant shark MODERN SPECIES 1532 ENSCMIG00000011150 limk1a (ENSCMIG00000011242) septin4a (ENSCMIG00000011603) ENSCMIG00000011642 ENSCMIG00000011644 bcl7bb (ENSCMIG00000011648) mks1 (ENSCMIG00000011652) baz1b (ENSCMIG00000011677) fzd9b (ENSCMIG00000011708) FKBP6 (ENSCMIG00000011711) tmem132e (ENSCMIG00000011717) #19 ENSCMIG00000011723 ENSCMIG00000011726 ENSCMIG00000011730 nsun5 (ENSCMIG00000011734) lig3 (ENSCMIG00000011832) #22 rad51d (ENSCMIG00000012263) #24 CLIP2 (ENSCMIG00000012276) GTF2IRD1 (ENSCMIG00000012299) GTF2I (ENSCMIG00000012308) ENSCMIG00000012316 polr2j (ENSCMIG00000012321) rasa4 (ENSCMIG00000012347) upk3bl1 (ENSCMIG00000012381) dtx2 (ENSCMIG00000012401) ENSCMIG00000012409 alkbh4 (ENSCMIG00000012411) ENSCMIG00000012417 bckdk (ENSCMIG00000012458) ENSCMIG00000012511 orai2 (ENSCMIG00000012514) Cyclostomata ANCESTRAL SPECIES ENSGT00940000156492 #22 Lamprey MODERN SPECIES 4060 lig3 (ENSPMAG00000001489) #22 Hagfish MODERN SPECIES 734 ENSEBUG00000011075 ENSEBUG00000010421 NSUN5 (ENSEBUG00000006181) aldh4a1 (ENSEBUG00000008604) lig3 (ENSEBUG00000002612) #22 ENSEBUG00000016416 Ciona ANCESTRAL SPECIES 687 ENSGT00940000156492 #22 ENSGT00940000168991 ENSGT00940000168413 Ciona intestinalis MODERN SPECIES 601 ENSCING00000002577 ENSCING00000002578 ENSCING00000002580 #22 ENSCING00000015023 ENSCING00000002583 ENSCING00000019280 ENSCING00000002585 ENSCING00000023894 Ciona savignyi MODERN SPECIES 223 ENSCSAVG00000006535 ENSCSAVG00000006574 ENSCSAVG00000006575 ENSCSAVG00000006577 ENSCSAVG00000006582 ENSCSAVG00000006669 ENSCSAVG00000006673 ENSCSAVG00000006675 ENSCSAVG00000006690 ENSCSAVG00000006698 ENSCSAVG00000006701 ENSCSAVG00000006703 ENSCSAVG00000006705 ENSCSAVG00000006708 ENSCSAVG00000006712 ENSCSAVG00000006723 #22 ENSCSAVG00000006726 ENSCSAVG00000006733 ENSCSAVG00000006741 ENSCSAVG00000006744 ENSCSAVG00000006763 ENSCSAVG00000006773 ENSCSAVG00000006775 ENSCSAVG00000006780 ENSCSAVG00000006783 ENSCSAVG00000006836 ENSCSAVG00000006956 ENSCSAVG00000006971 ENSCSAVG00000007099 ENSCSAVG00000007153 ENSCSAVG00000007159