Euteleostomi	ANCESTRAL SPECIES	29	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00940000167703	ENSGT00390000013347.a	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982
Sarcopterygii	ANCESTRAL SPECIES	8	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00940000167703	ENSGT00390000013347.a	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00940000167703	ENSGT00390000013347.a	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00390000008631.b	ENSGT00940000154102.b	ENSGT00940000157503	ENSGT00720000108868	ENSGT00940000155472.a.a
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00940000159855	ENSGT01030000234637.b.c	ENSGT00940000153629.a.b	ENSGT00940000158528	ENSGT00390000015154
Mammalia	ANCESTRAL SPECIES	36	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Theria	ANCESTRAL SPECIES		ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661.b	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Primates	ANCESTRAL SPECIES	12	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Rhinopithecus	ANCESTRAL SPECIES	328												ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000155264.m.b.a #24	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT00910000147739	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704
Black snub-nosed monkey	MODERN SPECIES	330													ENSRBIG00000027470 #19	TFEC (ENSRBIG00000029382) #20	TES (ENSRBIG00000026592) #21	CAV2 (ENSRBIG00000037179) #22	CAV1 (ENSRBIG00000031781) #23	ENSRBIG00000025422 #24	MET (ENSRBIG00000040650) #25
Golden snub-nosed monkey	MODERN SPECIES	2727																CAV2 (ENSRROG00000034834) #22	CAV1 (ENSRROG00000035906) #23	ENSRROG00000011599 #24	MET (ENSRROG00000042487) #25	ENSRROG00000039690	CAPZA2 (ENSRROG00000005766)	ST7 (ENSRROG00000037257)	WNT2 (ENSRROG00000016067)	ASZ1 (ENSRROG00000041719)	CFTR (ENSRROG00000026792)	CTTNBP2 (ENSRROG00000040541)	LSM8 (ENSRROG00000039618)	ANKRD7 (ENSRROG00000029970)
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.`b	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Vervet Monkey	MODERN SPECIES	13	ENSCSAG00000011163	LRRN3 (ENSCSAG00000019130)	DOCK4 (ENSCSAG00000011152)	ZNF277 (ENSCSAG00000011126)	IFRD1 (ENSCSAG00000011121)	ENSCSAG00000011114	TMEM168 (ENSCSAG00000011110)	BMT2 (ENSCSAG00000011101)	GPR85 (ENSCSAG00000019131)	SMIM30 (ENSCSAG00000011096)	PPP1R3A (ENSCSAG00000011088)	FOXP2 (ENSCSAG00000011057)	MDFIC (ENSCSAG00000010952)	TFEC (ENSCSAG00000010942) #20	TES (ENSCSAG00000010935) #21	CAV2 (ENSCSAG00000010925) #22	CAV1 (ENSCSAG00000010920) #23	MET (ENSCSAG00000010912) #25	CAPZA2 (ENSCSAG00000010902)	ST7 (ENSCSAG00000010897)	ENSCSAG00000010890	WNT2 (ENSCSAG00000010887)	ASZ1 (ENSCSAG00000010871)	ENSCSAG00000010820	CTTNBP2 (ENSCSAG00000010811)	ENSCSAG00000010802	ANKRD7 (ENSCSAG00000010796)	KCND2 (ENSCSAG00000010780)	TSPAN12 (ENSCSAG00000010773)	ING3 (ENSCSAG00000010764)	CPED1 (ENSCSAG00000010728)
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.`b	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a	ENSGT00510000047764
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000156246	ENSGT00390000013961.b.b	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.`b	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a	ENSGT00510000047764
Pig-tailed macaque	MODERN SPECIES	95										FOXP2 (ENSMNEG00000034461)	MDFIC (ENSMNEG00000045431)	TFEC (ENSMNEG00000000097) #20	ENSMNEG00000021473	ENSMNEG00000038687	TES (ENSMNEG00000039367) #21	CAV2 (ENSMNEG00000042279) #22	CAV1 (ENSMNEG00000044995) #23	MET (ENSMNEG00000038573) #25	CAPZA2 (ENSMNEG00000044342)	ENSMNEG00000042576	ST7 (ENSMNEG00000043047)	WNT2 (ENSMNEG00000035850)	ASZ1 (ENSMNEG00000042319)	CFTR (ENSMNEG00000042569)	CTTNBP2 (ENSMNEG00000039935)	ENSMNEG00000036764	ANKRD7 (ENSMNEG00000029642)	ENSMNEG00000007384	ENSMNEG00000038870	KCND2 (ENSMNEG00000001242)	TSPAN12 (ENSMNEG00000034729)
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000162392	ENSGT00940000156246	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.`b	ENSGT00940000164704	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Rhesus	MODERN SPECIES	13	DOCK4 (ENSMMUG00000002894)	ZNF277 (ENSMMUG00000015965)	IFRD1 (ENSMMUG00000008033)	LSMEM1 (ENSMMUG00000063584)	ENSMMUG00000052812	TMEM168 (ENSMMUG00000015543)	BMT2 (ENSMMUG00000015547)	GPR85 (ENSMMUG00000015548)	ENSMMUG00000063722	PPP1R3A (ENSMMUG00000022642)	FOXP2 (ENSMMUG00000008005)	ENSMMUG00000049886	MDFIC (ENSMMUG00000019776)	TFEC (ENSMMUG00000038489) #20	TES (ENSMMUG00000007097) #21	CAV2 (ENSMMUG00000061706) #22	CAV1 (ENSMMUG00000014122) #23	MET (ENSMMUG00000006779) #25	CAPZA2 (ENSMMUG00000006784)	ENSMMUG00000052234	ST7 (ENSMMUG00000021722)	WNT2 (ENSMMUG00000055123)	ENSMMUG00000064285	ASZ1 (ENSMMUG00000021726)	CFTR (ENSMMUG00000011269)	ENSMMUG00000060895	CTTNBP2 (ENSMMUG00000010297)	LSM8 (ENSMMUG00000060460)	ANKRD7 (ENSMMUG00000050524)	ENSMMUG00000052979	KCND2 (ENSMMUG00000023308)
Crab-eating macaque	MODERN SPECIES	13	IFRD1 (ENSMFAG00000045385)	LSMEM1 (ENSMFAG00000046136)	TMEM168 (ENSMFAG00000022462)	BMT2 (ENSMFAG00000042159)	ENSMFAG00000044619	GPR85 (ENSMFAG00000052996)	ENSMFAG00000057233	PPP1R3A (ENSMFAG00000053780)	ENSMFAG00000065499	ENSMFAG00000057626	FOXP2 (ENSMFAG00000000636)	MDFIC (ENSMFAG00000050895)	TFEC (ENSMFAG00000035684) #20	TES (ENSMFAG00000005909) #21	ENSMFAG00000064881	CAV2 (ENSMFAG00000048330) #22	CAV1 (ENSMFAG00000046330) #23	MET (ENSMFAG00000028602) #25	CAPZA2 (ENSMFAG00000041237)	ST7 (ENSMFAG00000008568)	WNT2 (ENSMFAG00000044147)	ASZ1 (ENSMFAG00000033937)	CFTR (ENSMFAG00000000170)	ENSMFAG00000053020	CTTNBP2 (ENSMFAG00000039255)	ENSMFAG00000056701	LSM8 (ENSMFAG00000047892)	ANKRD7 (ENSMFAG00000039109)	KCND2 (ENSMFAG00000046158)	TSPAN12 (ENSMFAG00000002377)	ING3 (ENSMFAG00000044425)
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00550000075044	ENSGT00940000154720.b.pb	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.`b	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a	ENSGT00510000047764
Olive baboon	MODERN SPECIES	14	ENSPANG00000038598	DOCK4 (ENSPANG00000023666)	ZNF277 (ENSPANG00000012693)	IFRD1 (ENSPANG00000021877)	LSMEM1 (ENSPANG00000032836)	ENSPANG00000049042	TMEM168 (ENSPANG00000025365)	BMT2 (ENSPANG00000022368)	GPR85 (ENSPANG00000038655)	SMIM30 (ENSPANG00000031865)	PPP1R3A (ENSPANG00000017583)	FOXP2 (ENSPANG00000024715)	MDFIC (ENSPANG00000015175)	TFEC (ENSPANG00000022367) #20	TES (ENSPANG00000008934) #21	CAV2 (ENSPANG00000045499) #22	CAV1 (ENSPANG00000015174) #23	MET (ENSPANG00000024383) #25	CAPZA2 (ENSPANG00000024714)	ST7 (ENSPANG00000020407)	WNT2 (ENSPANG00000048086)	ASZ1 (ENSPANG00000016260)	CFTR (ENSPANG00000015987)	CTTNBP2 (ENSPANG00000007108)	ENSPANG00000039754	ANKRD7 (ENSPANG00000016259)	ENSPANG00000045599	KCND2 (ENSPANG00000032534)	TSPAN12 (ENSPANG00000032965)	ING3 (ENSPANG00000018195)	CPED1 (ENSPANG00000016466)
Cercopithecinae_d	ANCESTRAL SPECIES	24	ENSGT00550000075044	ENSGT00940000154720.b.pb	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.`b	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a	ENSGT00510000047764
Sooty mangabey	MODERN SPECIES	283	RTL9 (ENSCATG00000041546)	ENSCATG00000015948	AMMECR1 (ENSCATG00000036662)	TMEM164 (ENSCATG00000040993)	ENSCATG00000040410	ACSL4 (ENSCATG00000045294)	ENSCATG00000033722	NXT2 (ENSCATG00000037402)	GUCY2F (ENSCATG00000044834)	IRS4 (ENSCATG00000036461)	ENSCATG00000039945	FOXP2 (ENSCATG00000043286)	MDFIC (ENSCATG00000005944)	TFEC (ENSCATG00000035757) #20	TES (ENSCATG00000018148) #21	CAV2 (ENSCATG00000031761) #22	CAV1 (ENSCATG00000030906) #23	MET (ENSCATG00000043244) #25	CAPZA2 (ENSCATG00000040117)	ST7 (ENSCATG00000044990)	ENSCATG00000034007	WNT2 (ENSCATG00000040118)	ASZ1 (ENSCATG00000034312)	CFTR (ENSCATG00000045275)	CTTNBP2 (ENSCATG00000043370)	LSM8 (ENSCATG00000045302)	ANKRD7 (ENSCATG00000005822)	ENSCATG00000014280	KCND2 (ENSCATG00000034255)	ENSCATG00000013909	TSPAN12 (ENSCATG00000032384)
Drill	MODERN SPECIES	1315													MDFIC (ENSMLEG00000029205)	TFEC (ENSMLEG00000044103) #20	TES (ENSMLEG00000040785) #21	CAV2 (ENSMLEG00000040633) #22	CAV1 (ENSMLEG00000029171) #23	MET (ENSMLEG00000026753) #25
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Pan	ANCESTRAL SPECIES	13	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.n.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Bonobo	MODERN SPECIES	20	LRRN3 (ENSPPAG00000010425)	ENSPPAG00000028203	DOCK4 (ENSPPAG00000040634)	ZNF277 (ENSPPAG00000029852)	IFRD1 (ENSPPAG00000042969)	LSMEM1 (ENSPPAG00000020364)	TMEM168 (ENSPPAG00000042305)	BMT2 (ENSPPAG00000031398)	ENSPPAG00000039584	SMIM30 (ENSPPAG00000019976)	PPP1R3A (ENSPPAG00000041499)	FOXP2 (ENSPPAG00000030868)	ENSPPAG00000027647	ENSPPAG00000004955 #20	TES (ENSPPAG00000034692) #21	CAV2 (ENSPPAG00000042201) #22	CAV1 (ENSPPAG00000036739) #23	MET (ENSPPAG00000038004) #25	CAPZA2 (ENSPPAG00000043436)	ENSPPAG00000042892	ST7 (ENSPPAG00000028019)	WNT2 (ENSPPAG00000030407)	ASZ1 (ENSPPAG00000041362)	CFTR (ENSPPAG00000040492)	CTTNBP2 (ENSPPAG00000032264)	ENSPPAG00000043228	ANKRD7 (ENSPPAG00000011992)	ENSPPAG00000026407	KCND2 (ENSPPAG00000034678)	TSPAN12 (ENSPPAG00000033647)	ING3 (ENSPPAG00000029024)
Chimpanzee	MODERN SPECIES	20	IMMP2L (ENSPTRG00000019594)	LRRN3 (ENSPTRG00000028417)	DOCK4 (ENSPTRG00000019598)	ZNF277 (ENSPTRG00000024152)	IFRD1 (ENSPTRG00000019601)	LSMEM1 (ENSPTRG00000019603)	TMEM168 (ENSPTRG00000019604)	BMT2 (ENSPTRG00000044767)	ENSPTRG00000048811	SMIM30 (ENSPTRG00000051687)	PPP1R3A (ENSPTRG00000019607)	FOXP2 (ENSPTRG00000019608)	MDFIC (ENSPTRG00000019609)	TFEC (ENSPTRG00000047353) #20	TES (ENSPTRG00000023877) #21	CAV2 (ENSPTRG00000040031) #22	CAV1 (ENSPTRG00000019613) #23	MET (ENSPTRG00000019614) #25	CAPZA2 (ENSPTRG00000019615)	ST7 (ENSPTRG00000019616)	WNT2 (ENSPTRG00000019617)	ASZ1 (ENSPTRG00000019618)	CFTR (ENSPTRG00000019619)	CTTNBP2 (ENSPTRG00000019620)	LSM8 (ENSPTRG00000046596)	ANKRD7 (ENSPTRG00000019622)	ENSPTRG00000050664	KCND2 (ENSPTRG00000047469)	TSPAN12 (ENSPTRG00000019624)	ING3 (ENSPTRG00000019625)	CPED1 (ENSPTRG00000019626)
Human	MODERN SPECIES	19	LRRN3 (ENSG00000173114)	DOCK4 (ENSG00000128512)	ZNF277 (ENSG00000198839)	IFRD1 (ENSG00000006652)	ENSG00000288634	LSMEM1 (ENSG00000181016)	TMEM168 (ENSG00000146802)	BMT2 (ENSG00000164603)	GPR85 (ENSG00000164604)	SMIM30 (ENSG00000214194)	PPP1R3A (ENSG00000154415)	FOXP2 (ENSG00000128573)	MDFIC (ENSG00000135272)	TFEC (ENSG00000105967) #20	TES (ENSG00000135269) #21	CAV2 (ENSG00000105971) #22	CAV1 (ENSG00000105974) #23	MET (ENSG00000105976) #25	CAPZA2 (ENSG00000198898)	ST7 (ENSG00000004866)	ENSG00000288635	WNT2 (ENSG00000105989)	CFTR (ENSG00000001626)	ASZ1 (ENSG00000154438)	CTTNBP2 (ENSG00000077063)	LSM8 (ENSG00000128534)	ANKRD7 (ENSG00000106013)	KCND2 (ENSG00000184408)	TSPAN12 (ENSG00000106025)	ING3 (ENSG00000071243)	CPED1 (ENSG00000106034)
Gorilla	MODERN SPECIES	20	ENSGGOG00000043490	LRRN3 (ENSGGOG00000026541)	DOCK4 (ENSGGOG00000004313)	ZNF277 (ENSGGOG00000005587)	IFRD1 (ENSGGOG00000000718)	LSMEM1 (ENSGGOG00000016165)	TMEM168 (ENSGGOG00000017194)	BMT2 (ENSGGOG00000027197)	ENSGGOG00000042174	SMIM30 (ENSGGOG00000003081)	PPP1R3A (ENSGGOG00000005621)	FOXP2 (ENSGGOG00000027435)	ENSGGOG00000042671	TFEC (ENSGGOG00000009901) #20	TES (ENSGGOG00000016067) #21	CAV2 (ENSGGOG00000015074) #22	CAV1 (ENSGGOG00000027870) #23	MET (ENSGGOG00000012982) #25	CAPZA2 (ENSGGOG00000012158)	ENSGGOG00000027365	ST7 (ENSGGOG00000014410)	WNT2 (ENSGGOG00000009721)	ASZ1 (ENSGGOG00000002659)	CFTR (ENSGGOG00000004019)	CTTNBP2 (ENSGGOG00000014941)	LSM8 (ENSGGOG00000041883)	ANKRD7 (ENSGGOG00000025444)	ENSGGOG00000039138	KCND2 (ENSGGOG00000043715)	TSPAN12 (ENSGGOG00000034918)	ING3 (ENSGGOG00000004349)
Orangutan	MODERN SPECIES	20	IMMP2L (ENSPPYG00000017913)	LRRN3 (ENSPPYG00000017914)	DOCK4 (ENSPPYG00000017916)	ZNF277 (ENSPPYG00000017917)	IFRD1 (ENSPPYG00000029715)	LSMEM1 (ENSPPYG00000017918)	TMEM168 (ENSPPYG00000017920)	BMT2 (ENSPPYG00000017921)	GPR85 (ENSPPYG00000017922)	SMIM30 (ENSPPYG00000017923)	PPP1R3A (ENSPPYG00000040617)	FOXP2 (ENSPPYG00000017926)	ENSPPYG00000038658	TFEC (ENSPPYG00000031887) #20	TES (ENSPPYG00000017929) #21	CAV2 (ENSPPYG00000017930) #22	CAV1 (ENSPPYG00000017931) #23	MET (ENSPPYG00000017932) #25	CAPZA2 (ENSPPYG00000017933)	ST7 (ENSPPYG00000017934)	WNT2 (ENSPPYG00000017938)	ASZ1 (ENSPPYG00000017939)	CFTR (ENSPPYG00000017940)	CTTNBP2 (ENSPPYG00000017941)	LSM8 (ENSPPYG00000033700)	ANKRD7 (ENSPPYG00000018274)	KCND2 (ENSPPYG00000017943)	TSPAN12 (ENSPPYG00000017944)	ING3 (ENSPPYG00000017945)	CPED1 (ENSPPYG00000017946)	WNT16 (ENSPPYG00000017947)
Gibbon	MODERN SPECIES	3	LRRN3 (ENSNLEG00000018600)	DOCK4 (ENSNLEG00000011076)	ZNF277 (ENSNLEG00000011240)	IFRD1 (ENSNLEG00000011280)	LSMEM1 (ENSNLEG00000011338)	TMEM168 (ENSNLEG00000011346)	BMT2 (ENSNLEG00000011360)	ENSNLEG00000034107	ENSNLEG00000032204	SMIM30 (ENSNLEG00000030553)	PPP1R3A (ENSNLEG00000011388)	FOXP2 (ENSNLEG00000011394)	ENSNLEG00000033212	TFEC (ENSNLEG00000011480) #20	TES (ENSNLEG00000011494) #21	ENSNLEG00000011523 #22	CAV1 (ENSNLEG00000028023) #23	MET (ENSNLEG00000011530) #25	ENSNLEG00000011604	ENSNLEG00000032514	ST7 (ENSNLEG00000011617)	ENSNLEG00000036065	WNT2 (ENSNLEG00000011635)	ASZ1 (ENSNLEG00000011649)	CFTR (ENSNLEG00000011680)	CTTNBP2 (ENSNLEG00000011717)	LSM8 (ENSNLEG00000011768)	ANKRD7 (ENSNLEG00000011773)	KCND2 (ENSNLEG00000035189)	TSPAN12 (ENSNLEG00000011786)	ING3 (ENSNLEG00000033180)
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852.c.b	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Cebidae	ANCESTRAL SPECIES	9	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852.c.b	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Marmoset	MODERN SPECIES	20	ENSCJAG00000086897	TMEM168 (ENSCJAG00000016982)	BMT2 (ENSCJAG00000055013)	GPR85 (ENSCJAG00000066877)	SMIM30 (ENSCJAG00000022992)	ENSCJAG00000083508	ENSCJAG00000075892	PPP1R3A (ENSCJAG00000017032)	FOXP2 (ENSCJAG00000017044)	MDFIC (ENSCJAG00000062950)	ENSCJAG00000080412	ENSCJAG00000053054	TFEC (ENSCJAG00000047848) #20	TES (ENSCJAG00000005193) #21	ENSCJAG00000079520	CAV2 (ENSCJAG00000054908) #22	CAV1 (ENSCJAG00000063550) #23	MET (ENSCJAG00000005145) #25	CAPZA2 (ENSCJAG00000005079)	ST7 (ENSCJAG00000004988)	ENSCJAG00000086472	WNT2 (ENSCJAG00000004983)	ASZ1 (ENSCJAG00000004944)	ENSCJAG00000074557	CFTR (ENSCJAG00000004895)	CTTNBP2 (ENSCJAG00000004816)	LSM8 (ENSCJAG00000077574)	ENSCJAG00000064536	ANKRD7 (ENSCJAG00000004788)	VIPR2 (ENSCJAG00000014084)	DYNC2I1 (ENSCJAG00000014109)
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852.c.b	ENSGT00390000013347.a.j	ENSGT00390000013347.a.i	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Bolivian squirrel monkey	MODERN SPECIES	44	IMMP2L (ENSSBOG00000019379)	DOCK4 (ENSSBOG00000024267)	ENSSBOG00000022341	ZNF277 (ENSSBOG00000026035)	IFRD1 (ENSSBOG00000024141)	LSMEM1 (ENSSBOG00000029697)	TMEM168 (ENSSBOG00000028241)	BMT2 (ENSSBOG00000024704)	ENSSBOG00000024017	SMIM30 (ENSSBOG00000007409)	PPP1R3A (ENSSBOG00000031325)	FOXP2 (ENSSBOG00000029085)	MDFIC (ENSSBOG00000032800)	TFEC (ENSSBOG00000024242) #20	TES (ENSSBOG00000031613) #21	CAV2 (ENSSBOG00000023114) #22	CAV1 (ENSSBOG00000029819) #23	MET (ENSSBOG00000018494) #25	ENSSBOG00000033214 ##19	CAPZA2 (ENSSBOG00000026180)	ST7 (ENSSBOG00000031136)	WNT2 (ENSSBOG00000026115)	ASZ1 (ENSSBOG00000014420)	CFTR (ENSSBOG00000034493)	CTTNBP2 (ENSSBOG00000032674)	LSM8 (ENSSBOG00000023223)	ANKRD7 (ENSSBOG00000021785)	ENSSBOG00000018270	KCND2 (ENSSBOG00000020186)	TSPAN12 (ENSSBOG00000018467)	ING3 (ENSSBOG00000032892)
Capuchin	MODERN SPECIES	90		DOCK4 (ENSCCAG00000021545)	ZNF277 (ENSCCAG00000010585)	ENSCCAG00000032511	LSMEM1 (ENSCCAG00000020280)	ENSCCAG00000020628	TMEM168 (ENSCCAG00000034296)	BMT2 (ENSCCAG00000022389)	ENSCCAG00000027586	SMIM30 (ENSCCAG00000007418)	PPP1R3A (ENSCCAG00000033016)	FOXP2 (ENSCCAG00000003699)	MDFIC (ENSCCAG00000022551)	TFEC (ENSCCAG00000022469) #20	TES (ENSCCAG00000036382) #21	CAV2 (ENSCCAG00000023447) #22	CAV1 (ENSCCAG00000031872) #23	MET (ENSCCAG00000031166) #25	CAPZA2 (ENSCCAG00000030246)	ST7 (ENSCCAG00000022641)	WNT2 (ENSCCAG00000031998)	ASZ1 (ENSCCAG00000028858)	CFTR (ENSCCAG00000026860)	CTTNBP2 (ENSCCAG00000021725)	LSM8 (ENSCCAG00000021329)	ANKRD7 (ENSCCAG00000028943)
Mas night monkey	MODERN SPECIES	297	LRRN3 (ENSANAG00000031510)	DOCK4 (ENSANAG00000004277)	ZNF277 (ENSANAG00000023318)	IFRD1 (ENSANAG00000023026)	LSMEM1 (ENSANAG00000036272)	TMEM168 (ENSANAG00000020281)	BMT2 (ENSANAG00000022125)	ENSANAG00000032418	ENSANAG00000035840	SMIM30 (ENSANAG00000031320)	PPP1R3A (ENSANAG00000034044)	FOXP2 (ENSANAG00000024352)	MDFIC (ENSANAG00000023162)	TFEC (ENSANAG00000032768) #20	TES (ENSANAG00000029543) #21	CAV2 (ENSANAG00000020482) #22	CAV1 (ENSANAG00000028257) #23	MET (ENSANAG00000022873) #25	CAPZA2 (ENSANAG00000032909)	ST7 (ENSANAG00000025043)	WNT2 (ENSANAG00000027702)	ASZ1 (ENSANAG00000024824)
Tarsier	MODERN SPECIES	5877															ENSTSYG00000013307	CAV2 (ENSTSYG00000008002) #22	CAV1 (ENSTSYG00000033105) #23	MET (ENSTSYG00000000920) #25
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.bb	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Lemuriformes_a	ANCESTRAL SPECIES	103	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.bb	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Greater bamboo lemur	MODERN SPECIES	863												FOXP2 (ENSPSMG00000021590)	MDFIC (ENSPSMG00000021846)	TFEC (ENSPSMG00000021885) #20	TES (ENSPSMG00000021891) #21	CAV2 (ENSPSMG00000021900) #22	CAV1 (ENSPSMG00000021915) #23	MET (ENSPSMG00000022011) #25
Coquerels sifaka	MODERN SPECIES	544		IMMP2L (ENSPCOG00000024644)	DOCK4 (ENSPCOG00000012230)	ZNF277 (ENSPCOG00000021226)	IFRD1 (ENSPCOG00000028703)	LSMEM1 (ENSPCOG00000021256)	TMEM168 (ENSPCOG00000017402)	BMT2 (ENSPCOG00000007067)	ENSPCOG00000021117	PPP1R3A (ENSPCOG00000020348)	FOXP2 (ENSPCOG00000027439)	MDFIC (ENSPCOG00000002097)	TFEC (ENSPCOG00000026787) #20	ENSPCOG00000014908	TES (ENSPCOG00000009261) #21	CAV2 (ENSPCOG00000025837) #22	CAV1 (ENSPCOG00000024742) #23	MET (ENSPCOG00000022991) #25	CAPZA2 (ENSPCOG00000021478)	ST7 (ENSPCOG00000008893)	WNT2 (ENSPCOG00000027908)	ASZ1 (ENSPCOG00000018076)	CFTR (ENSPCOG00000014929)	CTTNBP2 (ENSPCOG00000000372)	ENSPCOG00000003309	ENSPCOG00000017095	KCND2 (ENSPCOG00000015891)	TSPAN12 (ENSPCOG00000021720)	ENSPCOG00000028787	CPED1 (ENSPCOG00000016564)	WNT16 (ENSPCOG00000015467)
Mouse lemur	MODERN SPECIES	2	DNAJB9 (ENSMICG00000045525)	IMMP2L (ENSMICG00000029597)	DOCK4 (ENSMICG00000014052)	ZNF277 (ENSMICG00000014129)	IFRD1 (ENSMICG00000047065)	LSMEM1 (ENSMICG00000001379)	TMEM168 (ENSMICG00000007451)	BMT2 (ENSMICG00000047672)	ENSMICG00000047258	SMIM30 (ENSMICG00000041783)	PPP1R3A (ENSMICG00000046647)	FOXP2 (ENSMICG00000003648)	ENSMICG00000003662	TFEC (ENSMICG00000006995) #20	TES (ENSMICG00000007002) #21	CAV2 (ENSMICG00000045272) #22	CAV1 (ENSMICG00000026847) #23	MET (ENSMICG00000000697) #25	CAPZA2 (ENSMICG00000032607)	ST7 (ENSMICG00000005741)	WNT2 (ENSMICG00000005749)	ASZ1 (ENSMICG00000005752)	CFTR (ENSMICG00000046039)	CTTNBP2 (ENSMICG00000005787)	LSM8 (ENSMICG00000042730)	ENSMICG00000036567	ENSMICG00000048064	KCND2 (ENSMICG00000043428)	TSPAN12 (ENSMICG00000000958)	ENSMICG00000013934	CPED1 (ENSMICG00000036835)
Bushbaby	MODERN SPECIES	152		DOCK4 (ENSOGAG00000015147)	ZNF277 (ENSOGAG00000005326)	IFRD1 (ENSOGAG00000004194)	LSMEM1 (ENSOGAG00000004197)	TMEM168 (ENSOGAG00000004826)	BMT2 (ENSOGAG00000004827)	GPR85 (ENSOGAG00000003489)	SMIM30 (ENSOGAG00000029997)	PPP1R3A (ENSOGAG00000005234)	FOXP2 (ENSOGAG00000002833)	ENSOGAG00000027543	MDFIC (ENSOGAG00000002835)	TFEC (ENSOGAG00000010066) #20	TES (ENSOGAG00000010070) #21	CAV2 (ENSOGAG00000025779) #22	CAV1 (ENSOGAG00000014265) #23	MET (ENSOGAG00000003961) #25	CAPZA2 (ENSOGAG00000012540)	ST7 (ENSOGAG00000013563)	WNT2 (ENSOGAG00000013574)	ASZ1 (ENSOGAG00000003040)	CFTR (ENSOGAG00000001756)	CTTNBP2 (ENSOGAG00000001760)	LSM8 (ENSOGAG00000013377)	ENSOGAG00000006943	ENSOGAG00000025182	ENSOGAG00000027459	KCND2 (ENSOGAG00000031295)	TSPAN12 (ENSOGAG00000004209)	ING3 (ENSOGAG00000004212)
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Tree shrew	MODERN SPECIES	7395																CAV2 (ENSTBEG00000006087) #22	CAV1 (ENSTBEG00000006162) #23
Glires	ANCESTRAL SPECIES	18	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00940000163868	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00940000163868	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Chinese hamster chok1gshd	MODERN SPECIES	54	Ndufa4 (ENSCGRG00001012421)	Phf14 (ENSCGRG00001004536)	Thsd7a (ENSCGRG00001021435)	Tmem106b (ENSCGRG00001001564)	ENSCGRG00001008481	ENSCGRG00001002512	Tmem168 (ENSCGRG00001018555)	Bmt2 (ENSCGRG00001002593)	Gpr85 (ENSCGRG00001001502)	Smim30 (ENSCGRG00001006732)	Ppp1r3a (ENSCGRG00001019903)	Foxp2 (ENSCGRG00001011096)	Mdfic (ENSCGRG00001017688)	Tfec (ENSCGRG00001017234) #20	ENSCGRG00001023123 #21	Cav2 (ENSCGRG00001020610) #22	Cav1 (ENSCGRG00001019680) #23	Met (ENSCGRG00001011551) #25	Capza2 (ENSCGRG00001022803)	St7 (ENSCGRG00001018752)	Wnt2 (ENSCGRG00001005484)	Asz1 (ENSCGRG00001020481)	Cftr (ENSCGRG00001006106)	Cttnbp2 (ENSCGRG00001010648)	Lsm8 (ENSCGRG00001000450)	Ankrd7 (ENSCGRG00001022051)	ENSCGRG00001021813	ENSCGRG00001021329	Kcnd2 (ENSCGRG00001013210)	Tspan12 (ENSCGRG00001012145)	Ing3 (ENSCGRG00001012381)
Golden Hamster	MODERN SPECIES	724		ENSMAUG00000020191	Ndufa4 (ENSMAUG00000017004)	Phf14 (ENSMAUG00000015385)	Thsd7a (ENSMAUG00000015901)	Tmem106b (ENSMAUG00000017350)	ENSMAUG00000009860	Tmem168 (ENSMAUG00000014941)	Bmt2 (ENSMAUG00000019868)	Gpr85 (ENSMAUG00000015334)	Ppp1r3a (ENSMAUG00000018440)	Foxp2 (ENSMAUG00000016128)	Mdfic (ENSMAUG00000015022)	Tfec (ENSMAUG00000001990) #20	ENSMAUG00000001763 #21	Cav2 (ENSMAUG00000007439) #22	Cav1 (ENSMAUG00000005941) #23	Met (ENSMAUG00000012960) #25	Capza2 (ENSMAUG00000019994)	St7 (ENSMAUG00000008642)	Wnt2 (ENSMAUG00000012450)	ENSMAUG00000011480	Cftr (ENSMAUG00000013946)	Cttnbp2 (ENSMAUG00000014490)
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Northern American deer mouse	MODERN SPECIES	16	Tmem106b (ENSPEMG00000010222)	Vwde (ENSPEMG00000021059)	ENSPEMG00000030634	ENSPEMG00000004158	Tmem168 (ENSPEMG00000000238)	Bmt2 (ENSPEMG00000021873)	ENSPEMG00000024703	Gpr85 (ENSPEMG00000025083)	Smim30 (ENSPEMG00000015135)	Ppp1r3a (ENSPEMG00000011327)	Foxp2 (ENSPEMG00000017097)	Mdfic (ENSPEMG00000000955)	Tfec (ENSPEMG00000016053) #20	ENSPEMG00000002837 #21	ENSPEMG00000011977	Cav2 (ENSPEMG00000024329) #22	Cav1 (ENSPEMG00000024904) #23	Met (ENSPEMG00000021204) #25	Capza2 (ENSPEMG00000023836)	St7 (ENSPEMG00000006510)	Wnt2 (ENSPEMG00000024059)	Asz1 (ENSPEMG00000005011)	Cftr (ENSPEMG00000008730)	Cttnbp2 (ENSPEMG00000006365)	Lsm8 (ENSPEMG00000009153)	Ankrd7 (ENSPEMG00000015569)	ENSPEMG00000026145	ENSPEMG00000025502	ENSPEMG00000025522	ENSPEMG00000027299	Kcnd2 (ENSPEMG00000012871)
Prairie vole	MODERN SPECIES	350	ENSMOCG00000019332	Tmem106b (ENSMOCG00000019810)	ENSMOCG00000008088	ENSMOCG00000010148	ENSMOCG00000014014	Tmem168 (ENSMOCG00000016323)	Bmt2 (ENSMOCG00000003495)	Gpr85 (ENSMOCG00000007052)	Ppp1r3a (ENSMOCG00000007450)	Foxp2 (ENSMOCG00000018674)	Mdfic (ENSMOCG00000014159)	ENSMOCG00000018404	ENSMOCG00000002194	Tfec (ENSMOCG00000021582) #20	ENSMOCG00000011236 #21	Cav2 (ENSMOCG00000015582) #22	Cav1 (ENSMOCG00000019224) #23	Met (ENSMOCG00000006344) #25	Capza2 (ENSMOCG00000017352)	St7 (ENSMOCG00000016312)	Wnt2 (ENSMOCG00000022808)	Asz1 (ENSMOCG00000001767)	Cftr (ENSMOCG00000007371)	Cttnbp2 (ENSMOCG00000010478)	ENSMOCG00000018450	Lsm8 (ENSMOCG00000001688)	Kcnd2 (ENSMOCG00000022409)	Tspan12 (ENSMOCG00000018964)	Ing3 (ENSMOCG00000015011)	Cped1 (ENSMOCG00000013716)	Wnt16 (ENSMOCG00000021643)
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.c #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Mus	ANCESTRAL SPECIES	20	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.c #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.c #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.c #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Mouse	MODERN SPECIES	15	Nxph1 (ENSMUSG00000046178)	Ndufa4 (ENSMUSG00000029632)	Phf14 (ENSMUSG00000029629)	Thsd7a (ENSMUSG00000032625)	Tmem106b (ENSMUSG00000029571)	Vwde (ENSMUSG00000079679)	Tmem168 (ENSMUSG00000029569)	Bmt2 (ENSMUSG00000042742)	Gpr85 (ENSMUSG00000048216)	Smim30 (ENSMUSG00000052419)	Ppp1r3a (ENSMUSG00000042717)	Foxp2 (ENSMUSG00000029563)	Mdfic (ENSMUSG00000041390)	Tfec (ENSMUSG00000029553) #20	Tes (ENSMUSG00000029552) #21	Cav2 (ENSMUSG00000000058) #22	Cav1 (ENSMUSG00000007655) #23	Met (ENSMUSG00000009376) #25	Capza2 (ENSMUSG00000015733)	St7 (ENSMUSG00000029534)	Wnt2 (ENSMUSG00000010797)	Asz1 (ENSMUSG00000010796)	Cftr (ENSMUSG00000041301)	Cttnbp2 (ENSMUSG00000000416)	Lsm8 (ENSMUSG00000044155)	Ankrd7 (ENSMUSG00000029517)	Kcnd2 (ENSMUSG00000060882)	Tspan12 (ENSMUSG00000029669)	Ing3 (ENSMUSG00000029670)	Cped1 (ENSMUSG00000062980)	Wnt16 (ENSMUSG00000029671)
Mus_C	ANCESTRAL SPECIES	19	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.c #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Steppe mouse	MODERN SPECIES	3058												ENSMSIG00000019921	ENSMSIG00000019922	Tfec (ENSMSIG00000019924) #20	Tes (ENSMSIG00000019933) #21	Cav2 (ENSMSIG00000019974) #22	Cav1 (ENSMSIG00000019988) #23	Met (ENSMSIG00000020011) #25	Capza2 (ENSMSIG00000020054)	ENSMSIG00000020093	ENSMSIG00000020188	ENSMSIG00000020205	Cftr (ENSMSIG00000020275)
spretus	MODERN SPECIES	15	Nxph1 (MGP_SPRETEiJ_G0029101)	Ndufa4 (MGP_SPRETEiJ_G0029102)	MGP_SPRETEiJ_G0029103	Thsd7a (MGP_SPRETEiJ_G0029104)	Tmem106b (MGP_SPRETEiJ_G0029105)	Vwde (MGP_SPRETEiJ_G0029106)	Tmem168 (MGP_SPRETEiJ_G0029107)	Bmt2 (MGP_SPRETEiJ_G0029108)	Gpr85 (MGP_SPRETEiJ_G0029109)	Smim30 (MGP_SPRETEiJ_G0029110)	Ppp1r3a (MGP_SPRETEiJ_G0029111)	Foxp2 (MGP_SPRETEiJ_G0029112)	MGP_SPRETEiJ_G0029113	Tfec (MGP_SPRETEiJ_G0029114) #20	Tes (MGP_SPRETEiJ_G0029115) #21	Cav2 (MGP_SPRETEiJ_G0029116) #22	Cav1 (MGP_SPRETEiJ_G0029117) #23	Met (MGP_SPRETEiJ_G0029118) #25	Capza2 (MGP_SPRETEiJ_G0029119)	St7 (MGP_SPRETEiJ_G0029120)	Wnt2 (MGP_SPRETEiJ_G0029121)	Asz1 (MGP_SPRETEiJ_G0029122)	Cftr (MGP_SPRETEiJ_G0029123)	Cttnbp2 (MGP_SPRETEiJ_G0029124)	Lsm8 (MGP_SPRETEiJ_G0029125)	Ankrd7 (MGP_SPRETEiJ_G0029126)	Kcnd2 (MGP_SPRETEiJ_G0029127)	Tspan12 (MGP_SPRETEiJ_G0029128)	Ing3 (MGP_SPRETEiJ_G0029129)	Cped1 (MGP_SPRETEiJ_G0029130)	Wnt16 (MGP_SPRETEiJ_G0029131)
Ryukyu mouse	MODERN SPECIES	15	Nxph1 (MGP_CAROLIEiJ_G0028101)	Ndufa4 (MGP_CAROLIEiJ_G0028102)	MGP_CAROLIEiJ_G0028103	MGP_CAROLIEiJ_G0028104	Tmem106b (MGP_CAROLIEiJ_G0028105)	Vwde (MGP_CAROLIEiJ_G0028106)	MGP_CAROLIEiJ_G0028107	Bmt2 (MGP_CAROLIEiJ_G0028108)	Gpr85 (MGP_CAROLIEiJ_G0028109)	Smim30 (MGP_CAROLIEiJ_G0028110)	Ppp1r3a (MGP_CAROLIEiJ_G0028111)	Foxp2 (MGP_CAROLIEiJ_G0028112)	MGP_CAROLIEiJ_G0028113	Tfec (MGP_CAROLIEiJ_G0028114) #20	Tes (MGP_CAROLIEiJ_G0028115) #21	Cav2 (MGP_CAROLIEiJ_G0028116) #22	Cav1 (MGP_CAROLIEiJ_G0028117) #23	Met (MGP_CAROLIEiJ_G0028118) #25	Capza2 (MGP_CAROLIEiJ_G0028119)	St7 (MGP_CAROLIEiJ_G0028120)	Wnt2 (MGP_CAROLIEiJ_G0028121)	Asz1 (MGP_CAROLIEiJ_G0028122)	Cftr (MGP_CAROLIEiJ_G0028123)	Cttnbp2 (MGP_CAROLIEiJ_G0028124)	Lsm8 (MGP_CAROLIEiJ_G0028125)	Ankrd7 (MGP_CAROLIEiJ_G0028126)	Kcnd2 (MGP_CAROLIEiJ_G0028127)	Tspan12 (MGP_CAROLIEiJ_G0028128)	Ing3 (MGP_CAROLIEiJ_G0028129)	Cped1 (MGP_CAROLIEiJ_G0028130)	Wnt16 (MGP_CAROLIEiJ_G0028131)
Shrew mouse	MODERN SPECIES	11	Nxph1 (MGP_PahariEiJ_G0021857)	Ndufa4 (MGP_PahariEiJ_G0021858)	MGP_PahariEiJ_G0021859	Thsd7a (MGP_PahariEiJ_G0021860)	Tmem106b (MGP_PahariEiJ_G0021861)	Vwde (MGP_PahariEiJ_G0021862)	MGP_PahariEiJ_G0021863	Bmt2 (MGP_PahariEiJ_G0021864)	Gpr85 (MGP_PahariEiJ_G0021865)	Smim30 (MGP_PahariEiJ_G0021866)	Ppp1r3a (MGP_PahariEiJ_G0021867)	Foxp2 (MGP_PahariEiJ_G0021868)	MGP_PahariEiJ_G0021869	Tfec (MGP_PahariEiJ_G0021870) #20	Tes (MGP_PahariEiJ_G0021871) #21	Cav2 (MGP_PahariEiJ_G0021872) #22	Cav1 (MGP_PahariEiJ_G0021873) #23	Met (MGP_PahariEiJ_G0021874) #25	Capza2 (MGP_PahariEiJ_G0021875)	St7 (MGP_PahariEiJ_G0021876)	Wnt2 (MGP_PahariEiJ_G0021877)	Asz1 (MGP_PahariEiJ_G0021878)	Cftr (MGP_PahariEiJ_G0021879)	Cttnbp2 (MGP_PahariEiJ_G0021880)	MGP_PahariEiJ_G0021881	Ankrd7 (MGP_PahariEiJ_G0021882)	Kcnd2 (MGP_PahariEiJ_G0021883)	Tspan12 (MGP_PahariEiJ_G0021884)	Ing3 (MGP_PahariEiJ_G0021885)	Cped1 (MGP_PahariEiJ_G0021886)	Wnt16 (MGP_PahariEiJ_G0021887)
Rat	MODERN SPECIES	14	AABR07059877.1 (ENSRNOG00000039626)	Tas2r7l (ENSRNOG00000024685)	ENSRNOG00000064825	LOC100911252 (ENSRNOG00000062896)	Tmem168 (ENSRNOG00000057290)	Bmt2 (ENSRNOG00000007224)	ENSRNOG00000031207	Gpr85 (ENSRNOG00000024636)	Ppp1r3a (ENSRNOG00000059350)	Foxp2 (ENSRNOG00000054508)	Rbmxl1b (ENSRNOG00000059347)	Mdfic (ENSRNOG00000053787)	RGD1562178 (ENSRNOG00000052702)	Tfec (ENSRNOG00000061595) #20	Tes (ENSRNOG00000051952) #21	Cav2 (ENSRNOG00000057713) #22	Cav1 (ENSRNOG00000056836) #23	Met (ENSRNOG00000052745) #25	Capza2 (ENSRNOG00000056207)	ST7 (ENSRNOG00000056243)	AC123138.1 (ENSRNOG00000012822)	Wnt2 (ENSRNOG00000051905)	Asz1 (ENSRNOG00000060343)	ENSRNOG00000067965	Cftr (ENSRNOG00000055103)	Cttnbp2 (ENSRNOG00000061845)	Lsm8 (ENSRNOG00000070946)	Ankrd7 (ENSRNOG00000055481)	LOC685171 (ENSRNOG00000058543)	Kcnd2 (ENSRNOG00000067416)	Tspan12 (ENSRNOG00000059016)
Upper Galilee mountains blind mole rat	MODERN SPECIES	433													Tfec (ENSNGAG00000014386) #20	ENSNGAG00000019096	ENSNGAG00000016766 #21	Cav2 (ENSNGAG00000015969) #22	Cav1 (ENSNGAG00000019636) #23	Met (ENSNGAG00000014046) #25	Capza2 (ENSNGAG00000001281)	St7 (ENSNGAG00000016185)	Wnt2 (ENSNGAG00000001319)	Asz1 (ENSNGAG00000019679)	Cftr (ENSNGAG00000012834)	Cttnbp2 (ENSNGAG00000000754)	Lsm8 (ENSNGAG00000016554)
Lesser Egyptian jerboa	MODERN SPECIES	67	ENSJJAG00000000554	Qrfprl (ENSJJAG00000017977)	Hpgds (ENSJJAG00000020796)	Smarcad1 (ENSJJAG00000022342)	ENSJJAG00000023468	Atoh1 (ENSJJAG00000001013)	Grid2 (ENSJJAG00000010736)	ENSJJAG00000011795	ENSJJAG00000012600	Ppp1r3a (ENSJJAG00000014929)	ENSJJAG00000016852	Mdfic (ENSJJAG00000012683)	ENSJJAG00000012867	Tfec (ENSJJAG00000015649) #20	ENSJJAG00000019082 #21	Cav2 (ENSJJAG00000020789) #22	Cav1 (ENSJJAG00000021423) #23	ENSJJAG00000000187	Met (ENSJJAG00000012125) #25	ENSJJAG00000021128	St7 (ENSJJAG00000004440)	Wnt2 (ENSJJAG00000017203)	Asz1 (ENSJJAG00000022495)	ENSJJAG00000022583	Cttnbp2 (ENSJJAG00000013148)	ENSJJAG00000003447	Lsm8 (ENSJJAG00000009031)	ENSJJAG00000011628	ENSJJAG00000016745	ENSJJAG00000019540	Kcnd2 (ENSJJAG00000000160)
Kangaroo rat	MODERN SPECIES	367	Ndufa4 (ENSDORG00000026556)	ENSDORG00000023739	Phf14 (ENSDORG00000015520)	Thsd7a (ENSDORG00000010842)	Tmem106b (ENSDORG00000007476)	ENSDORG00000012385	Tmem168 (ENSDORG00000024855)	Bmt2 (ENSDORG00000024427)	Gpr85 (ENSDORG00000025306)	Ppp1r3a (ENSDORG00000023629)	Foxp2 (ENSDORG00000007040)	Mdfic (ENSDORG00000001488)	Tfec (ENSDORG00000004403) #20	ENSDORG00000029823	ENSDORG00000016725 #21	Cav2 (ENSDORG00000023298) #22	Cav1 (ENSDORG00000026258) #23	Met (ENSDORG00000002178) #25	Capza2 (ENSDORG00000016226)	St7 (ENSDORG00000016230)	Wnt2 (ENSDORG00000016233)	Asz1 (ENSDORG00000007590)	Cftr (ENSDORG00000005421)	ENSDORG00000023544	Cttnbp2 (ENSDORG00000005026)	Lsm8 (ENSDORG00000027868)	Ankrd7 (ENSDORG00000002700)	ENSDORG00000028967	Kcnd2 (ENSDORG00000003100)	Tspan12 (ENSDORG00000003102)	Ing3 (ENSDORG00000014497)
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00940000182222	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Marmotini	ANCESTRAL SPECIES	35	ENSGT00940000154268.f	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000163868	ENSGT01100000263477.F	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.y	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Marmotini_b	ANCESTRAL SPECIES	193							ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.y	ENSGT00940000161777.b
Squirrel	MODERN SPECIES	189							ENSSTOG00000020797	BMT2 (ENSSTOG00000021009)	GPR85 (ENSSTOG00000019520)	SMIM30 (ENSSTOG00000028596)	PPP1R3A (ENSSTOG00000026781)	FOXP2 (ENSSTOG00000008964)	MDFIC (ENSSTOG00000014533)	TFEC (ENSSTOG00000001224) #20	TES (ENSSTOG00000025936) #21	CAV2 (ENSSTOG00000021668) #22	CAV1 (ENSSTOG00000029133) #23	MET (ENSSTOG00000029241) #25	CAPZA2 (ENSSTOG00000024828)	ST7 (ENSSTOG00000005659)	WNT2 (ENSSTOG00000005674)	ASZ1 (ENSSTOG00000005688)	ENSSTOG00000005707	CTTNBP2 (ENSSTOG00000023371)	ENSSTOG00000009039
Arctic ground squirrel	MODERN SPECIES	450														TFEC (ENSUPAG00010007755) #20	TES (ENSUPAG00010007745) #21	CAV2 (ENSUPAG00010007734) #22	CAV1 (ENSUPAG00010007722) #23	MET (ENSUPAG00010007695) #25	CAPZA2 (ENSUPAG00010007688)
Eurasian red squirrel	MODERN SPECIES	17	VWDE (ENSSVLG00005004522)	ENSSVLG00005004482	TMEM168 (ENSSVLG00005004449)	ENSSVLG00005004429	BMT2 (ENSSVLG00005004404)	GPR85 (ENSSVLG00005004361)	SMIM30 (ENSSVLG00005004347)	PPP1R3A (ENSSVLG00005004322)	ENSSVLG00005019641	ENSSVLG00005018881	MDFIC (ENSSVLG00005018724)	TFEC (ENSSVLG00005018526) #20	ENSSVLG00005018477	TES (ENSSVLG00005018372) #21	ENSSVLG00005018352	CAV2 (ENSSVLG00005018312) #22	CAV1 (ENSSVLG00005018241) #23	ENSSVLG00005018138	ENSSVLG00005018122	CAPZA2 (ENSSVLG00005017995)	ST7 (ENSSVLG00005015943)	WNT2 (ENSSVLG00005015494)	ENSSVLG00005015363	CFTR (ENSSVLG00005014470)	CTTNBP2 (ENSSVLG00005014155)	LSM8 (ENSSVLG00005014022)	ENSSVLG00005013879	ENSSVLG00005013739	KCND2 (ENSSVLG00005013713)	TSPAN12 (ENSSVLG00005013639)	ING3 (ENSSVLG00005013543)
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00940000156923	ENSGT00940000155427	ENSGT00940000158360	ENSGT00940000160835	ENSGT00940000163868	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00840000131243	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619.l	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Naked mole-rat female	MODERN SPECIES	5	ENSHGLG00000048293	BMT2 (ENSHGLG00000019466)	ENSHGLG00000048859	GPR85 (ENSHGLG00000033932)	SMIM30 (ENSHGLG00000021399)	PPP1R3A (ENSHGLG00000043566)	ENSHGLG00000046698	ENSHGLG00000047898	FOXP2 (ENSHGLG00000019590)	MDFIC (ENSHGLG00000040491)	ENSHGLG00000036175	TFEC (ENSHGLG00000013967) #20	ENSHGLG00000013746 #21	ENSHGLG00000042544	ENSHGLG00000035433	CAV2 (ENSHGLG00000050485) #22	ENSHGLG00000042630 #23	MET (ENSHGLG00000002836) #25	ENSHGLG00000031932	ENSHGLG00000042742	ENSHGLG00000002784	ST7 (ENSHGLG00000002466)	ENSHGLG00000003310	WNT2 (ENSHGLG00000036817)	ASZ1 (ENSHGLG00000002226)	ENSHGLG00000041588	ENSHGLG00000002151	ENSHGLG00000037153	NAA38 (ENSHGLG00000043821)	ENSHGLG00000038825	ENSHGLG00000006757
Lagomorpha	ANCESTRAL SPECIES	24	ENSGT00940000164174	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Rabbit	MODERN SPECIES	18	ENSOCUG00000035861	ENSOCUG00000037565	ENSOCUG00000035499	TMEM168 (ENSOCUG00000010789)	BMT2 (ENSOCUG00000010795)	GPR85 (ENSOCUG00000003511)	SMIM30 (ENSOCUG00000033280)	ENSOCUG00000036847	PPP1R3A (ENSOCUG00000000303)	ENSOCUG00000038780	ENSOCUG00000024434	FOXP2 (ENSOCUG00000001801)	MDFIC (ENSOCUG00000012455)	TFEC (ENSOCUG00000006292) #20	TES (ENSOCUG00000008491) #21	CAV2 (ENSOCUG00000014515) #22	CAV1 (ENSOCUG00000014520) #23	MET (ENSOCUG00000013060) #25	ST7 (ENSOCUG00000016156)	WNT2 (ENSOCUG00000016173)	ASZ1 (ENSOCUG00000015962)	CFTR (ENSOCUG00000010733)	ENSOCUG00000038182	CTTNBP2 (ENSOCUG00000001386)	LSM8 (ENSOCUG00000017359)	ENSOCUG00000021922	ENSOCUG00000032257	ENSOCUG00000023965	ENSOCUG00000037642	KCND2 (ENSOCUG00000004149)	TSPAN12 (ENSOCUG00000001875)
Pika	MODERN SPECIES	7151															TES (ENSOPRG00000011998) #21	CAV2 (ENSOPRG00000012020) #22	CAV1 (ENSOPRG00000012036) #23
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183006.A.b #22
Hedgehog	DUPLICATION
Hedgehog	MODERN SPECIES	13583																ENSEEUG00000011365 #22
Hedgehog	MODERN SPECIES	15152																ENSEEUG00000008141 #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Suina	ANCESTRAL SPECIES	19	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Pig	MODERN SPECIES	9	IMMP2L (ENSSSCG00000061899)	ENSSSCG00000016649	DOCK4 (ENSSSCG00000025602)	ZNF277 (ENSSSCG00000025910)	IFRD1 (ENSSSCG00000016646)	LSMEM1 (ENSSSCG00000040053)	TMEM168 (ENSSSCG00000016643)	BMT2 (ENSSSCG00000021466)	GPR85 (ENSSSCG00000016642)	SMIM30 (ENSSSCG00000057236)	PPP1R3A (ENSSSCG00000016640)	FOXP2 (ENSSSCG00000016639)	MDFIC (ENSSSCG00000021885)	TFEC (ENSSSCG00000038138) #20	TES (ENSSSCG00000040344) #21	CAV2 (ENSSSCG00000016635) #22	CAV1 (ENSSSCG00000016634) #23	MET (ENSSSCG00000024351) #25	CAPZA2 (ENSSSCG00000028113)	ST7 (ENSSSCG00000016629)	WNT2 (ENSSSCG00000016628)	ASZ1 (ENSSSCG00000016627)	CFTR (ENSSSCG00000016626)	CTTNBP2 (ENSSSCG00000016625)	ENSSSCG00000050786	LSM8 (ENSSSCG00000021652)	ENSSSCG00000016623	ENSSSCG00000048258	ENSSSCG00000063110	ENSSSCG00000062673	KCND2 (ENSSSCG00000016621)
Chacoan peccary	MODERN SPECIES	77	LRRN3 (ENSCWAG00000003149)	IMMP2L (ENSCWAG00000003136)	DOCK4 (ENSCWAG00000002743)	ZNF277 (ENSCWAG00000002646)	IFRD1 (ENSCWAG00000002630)	LSMEM1 (ENSCWAG00000002623)	TMEM168 (ENSCWAG00000002613)	BMT2 (ENSCWAG00000002597)	GPR85 (ENSCWAG00000002586)	SMIM30 (ENSCWAG00000002580)	PPP1R3A (ENSCWAG00000002572)	FOXP2 (ENSCWAG00000001545)	MDFIC (ENSCWAG00000001387)	TFEC (ENSCWAG00000001241) #20	TES (ENSCWAG00000001199) #21	CAV2 (ENSCWAG00000001180) #22	CAV1 (ENSCWAG00000001146) #23	MET (ENSCWAG00000001097) #25	CAPZA2 (ENSCWAG00000001039)	ST7 (ENSCWAG00000000933)	WNT2 (ENSCWAG00000000864)	ASZ1 (ENSCWAG00000000809)	CFTR (ENSCWAG00000000306)	CTTNBP2 (ENSCWAG00000000156)
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Camelidae	ANCESTRAL SPECIES	2	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Arabian camel	MODERN SPECIES	33	LRRN3 (ENSCDRG00005000696)	DOCK4 (ENSCDRG00005000838)	ZNF277 (ENSCDRG00005001498)	IFRD1 (ENSCDRG00005001525)	LSMEM1 (ENSCDRG00005001557)	TMEM168 (ENSCDRG00005001569)	BMT2 (ENSCDRG00005001589)	GPR85 (ENSCDRG00005001607)	SMIM30 (ENSCDRG00005001611)	PPP1R3A (ENSCDRG00005001622)	FOXP2 (ENSCDRG00005001657)	MDFIC (ENSCDRG00005001780)	TFEC (ENSCDRG00005001818) #20	TES (ENSCDRG00005001915) #21	ENSCDRG00005001925	CAV2 (ENSCDRG00005001940) #22	CAV1 (ENSCDRG00005001956) #23	MET (ENSCDRG00005001975) #25	CAPZA2 (ENSCDRG00005002005)	ST7 (ENSCDRG00005002055)	WNT2 (ENSCDRG00005002127)	ASZ1 (ENSCDRG00005002142)	CFTR (ENSCDRG00005002205)	CTTNBP2 (ENSCDRG00005002863)	LSM8 (ENSCDRG00005003356)	ENSCDRG00005003389	ENSCDRG00005003449	KCND2 (ENSCDRG00005003477)	TSPAN12 (ENSCDRG00005003541)	ING3 (ENSCDRG00005003592)	CPED1 (ENSCDRG00005003698)
Alpaca	MODERN SPECIES	3405																CAV2 (ENSVPAG00000008743) #22	CAV1 (ENSVPAG00000008744) #23	MET (ENSVPAG00000008745) #25	CAPZA2 (ENSVPAG00000008751)	ENSVPAG00000008752	WNT2 (ENSVPAG00000008754)	ASZ1 (ENSVPAG00000008757)	CFTR (ENSVPAG00000008758)	CTTNBP2 (ENSVPAG00000008763)
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Pecora	ANCESTRAL SPECIES	11	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.a	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b	ENSGT00940000154738.a
Yarkand deer	MODERN SPECIES	9	DOCK4 (ENSCHYG00000010847)	ZNF277 (ENSCHYG00000010486)	IFRD1 (ENSCHYG00000010329)	LSMEM1 (ENSCHYG00000010293)	ENSCHYG00000010263	TMEM168 (ENSCHYG00000010204)	BMT2 (ENSCHYG00000010166)	GPR85 (ENSCHYG00000010143)	SMIM30 (ENSCHYG00000010105)	PPP1R3A (ENSCHYG00000010061)	ENSCHYG00000010022	FOXP2 (ENSCHYG00000009585)	MDFIC (ENSCHYG00000009513)	TFEC (ENSCHYG00000009370) #20	TES (ENSCHYG00000009300) #21	CAV2 (ENSCHYG00000009254) #22	CAV1 (ENSCHYG00000009187) #23	MET (ENSCHYG00000008936) #25	ENSCHYG00000008862 ##19	CAPZA2 (ENSCHYG00000008671)	ST7 (ENSCHYG00000006854)	WNT2 (ENSCHYG00000006691)	ASZ1 (ENSCHYG00000006576)	CFTR (ENSCHYG00000006329)	CTTNBP2 (ENSCHYG00000006159)	STARD3NL (ENSCHYG00000006133)	EPDR1 (ENSCHYG00000006107)	SFRP4 (ENSCHYG00000006040)	NME8 (ENSCHYG00000005941)	ENSCHYG00000005916	PNPLA8 (ENSCHYG00000005855)
Percora_a	ANCESTRAL SPECIES	11	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.a	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Bovidae	ANCESTRAL SPECIES	12	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Caprinae	ANCESTRAL SPECIES	10	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.a	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b.f	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Rambouillet Sheep	MODERN SPECIES	20	IMMP2L (ENSOARG00020002972)	DOCK4 (ENSOARG00020002182)	ZNF277 (ENSOARG00020002033)	IFRD1 (ENSOARG00020001965)	LSMEM1 (ENSOARG00020001907)	TMEM168 (ENSOARG00020001882)	BMT2 (ENSOARG00020001855)	GPR85 (ENSOARG00020001848)	SMIM30 (ENSOARG00020001844)	ENSOARG00020001818	PPP1R3A (ENSOARG00020001807)	FOXP2 (ENSOARG00020001223)	MDFIC (ENSOARG00020001137)	TFEC (ENSOARG00020001041) #20	TES (ENSOARG00020000994) #21	CAV2 (ENSOARG00020000978) #22	CAV1 (ENSOARG00020000956) #23	MET (ENSOARG00020000868) #25	ENSOARG00020000812	ST7 (ENSOARG00020000287)	WNT2 (ENSOARG00020000160)	ASZ1 (ENSOARG00020000134)	CFTR (ENSOARG00020016363)	CTTNBP2 (ENSOARG00020016233)	ENSOARG00020016185	ENSOARG00020016145	ENSOARG00020016114	ENSOARG00020016083	ENSOARG00020016021	STARD3NL (ENSOARG00020015943)	EPDR1 (ENSOARG00020015795)
Goat	MODERN SPECIES	23	ENSCHIG00000009535	DOCK4 (ENSCHIG00000020044)	ZNF277 (ENSCHIG00000009269)	IFRD1 (ENSCHIG00000017336)	LSMEM1 (ENSCHIG00000025752)	TMEM168 (ENSCHIG00000016804)	BMT2 (ENSCHIG00000025584)	GPR85 (ENSCHIG00000007525)	ENSCHIG00000022950	PPP1R3A (ENSCHIG00000008771)	ENSCHIG00000008927	FOXP2 (ENSCHIG00000023721)	MDFIC (ENSCHIG00000011870)	TFEC (ENSCHIG00000019490) #20	TES (ENSCHIG00000026164) #21	CAV2 (ENSCHIG00000013089) #22	CAV1 (ENSCHIG00000019290) #23	MET (ENSCHIG00000024998) #25	CAPZA2 (ENSCHIG00000013697)	ST7 (ENSCHIG00000020176)	WNT2 (ENSCHIG00000011054)	ASZ1 (ENSCHIG00000019569)	CFTR (ENSCHIG00000017768)	CTTNBP2 (ENSCHIG00000014972)	ENSCHIG00000012425	ENSCHIG00000019241	ENSCHIG00000026070	STARD3NL (ENSCHIG00000018771)	ENSCHIG00000011047	EPDR1 (ENSCHIG00000019001)	SFRP4 (ENSCHIG00000008577)
Bovinae	ANCESTRAL SPECIES	8	ENSGT00940000160513	ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476.q	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Bos	ANCESTRAL SPECIES	8	ENSGT00940000160513	ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293.g	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.b	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476.q	ENSGT00940000161910
Bos_b	ANCESTRAL SPECIES	7	ENSGT00940000160513	ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293.g	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.b	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476.q	ENSGT00940000161910
Hybrid Bos Indicus	MODERN SPECIES	23	ZNF277 (ENSBIXG00005010603)	ENSBIXG00005010570	IFRD1 (ENSBIXG00005000897)	LSMEM1 (ENSBIXG00005000893)	ENSBIXG00005000889	TMEM168 (ENSBIXG00005005951)	BMT2 (ENSBIXG00005010418)	GPR85 (ENSBIXG00005000762)	SMIM30 (ENSBIXG00005010364)	PPP1R3A (ENSBIXG00005010352)	FOXP2 (ENSBIXG00005010281)	MDFIC (ENSBIXG00005006771)	TFEC (ENSBIXG00005010074) #20	TES (ENSBIXG00005010013) #21	ENSBIXG00005000753	CAV2 (ENSBIXG00005009987) #22	CAV1 (ENSBIXG00005009977) #23	MET (ENSBIXG00005009936) #25	CAPZA2 (ENSBIXG00005009887)	ST7 (ENSBIXG00005009830)	WNT2 (ENSBIXG00005009672)	ASZ1 (ENSBIXG00005009631)	CFTR (ENSBIXG00005009586)	CTTNBP2 (ENSBIXG00005009484)	ENSBIXG00005009413	ENSBIXG00005009400	ENSBIXG00005009393	ENSBIXG00005000491	ENSBIXG00005009371	ENSBIXG00005029235	ENSBIXG00005001596
Cow	MODERN SPECIES	23	IMMP2L (ENSBTAG00000004398)	DOCK4 (ENSBTAG00000021182)	ZNF277 (ENSBTAG00000013050)	IFRD1 (ENSBTAG00000010549)	LSMEM1 (ENSBTAG00000010555)	TMEM168 (ENSBTAG00000021967)	BMT2 (ENSBTAG00000007608)	GPR85 (ENSBTAG00000032844)	PPP1R3A (ENSBTAG00000006733)	UBE2I (ENSBTAG00000054178)	FOXP2 (ENSBTAG00000011246)	MDFIC (ENSBTAG00000021543)	TFEC (ENSBTAG00000014228) #20	ENSBTAG00000055251	TES (ENSBTAG00000021204) #21	CAV2 (ENSBTAG00000049397) #22	CAV1 (ENSBTAG00000017869) #23	MET (ENSBTAG00000006161) #25	CAPZA2 (ENSBTAG00000004072)	ST7 (ENSBTAG00000010756)	WNT2 (ENSBTAG00000008097)	ASZ1 (ENSBTAG00000000169)	CFTR (ENSBTAG00000006589)	CTTNBP2 (ENSBTAG00000021469)	TARP (ENSBTAG00000036154)	ENSBTAG00000053502	ENSBTAG00000035945	STARD3NL (ENSBTAG00000038795)	EPDR1 (ENSBTAG00000033197)	ENSBTAG00000052470	SFRP4 (ENSBTAG00000015366)
Bos_a	ANCESTRAL SPECIES	12	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00400000023684.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293.g	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000155476.q	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Domestic yak	MODERN SPECIES	23	ZNF277 (ENSBGRG00000001704)	IFRD1 (ENSBGRG00000001761)	LSMEM1 (ENSBGRG00000001792)	ENSBGRG00000001803	ENSBGRG00000001808	TMEM168 (ENSBGRG00000001815)	BMT2 (ENSBGRG00000001829)	SMIM30 (ENSBGRG00000001848)	ENSBGRG00000001853	PPP1R3A (ENSBGRG00000001862)	FOXP2 (ENSBGRG00000001901)	ENSBGRG00000001995	MDFIC (ENSBGRG00000002028)	TFEC (ENSBGRG00000002059) #20	TES (ENSBGRG00000002095) #21	CAV2 (ENSBGRG00000002106) #22	CAV1 (ENSBGRG00000002134) #23	MET (ENSBGRG00000002220) #25	CAPZA2 (ENSBGRG00000002497)	ST7 (ENSBGRG00000002726)	WNT2 (ENSBGRG00000003541)	ASZ1 (ENSBGRG00000003561)	CFTR (ENSBGRG00000003733)	ENSBGRG00000004699	CTTNBP2 (ENSBGRG00000004719)	ENSBGRG00000004815	ENSBGRG00000004851	ENSBGRG00000004925	EPDR1 (ENSBGRG00000004974)	SFRP4 (ENSBGRG00000005021)	NME8 (ENSBGRG00000005050)
Wild yak	MODERN SPECIES	1064															TES (ENSBMUG00000013824) #21	CAV2 (ENSBMUG00000013835) #22	CAV1 (ENSBMUG00000013848) #23	MET (ENSBMUG00000013884) #25	CAPZA2 (ENSBMUG00000013919)	ST7 (ENSBMUG00000014041)	WNT2 (ENSBMUG00000014168)	ASZ1 (ENSBMUG00000014197)	CFTR (ENSBMUG00000014258)
American bison	MODERN SPECIES	3370	LRRN3 (ENSBBBG00000000155)	ENSBBBG00000000156	DOCK4 (ENSBBBG00000001419)	ZNF277 (ENSBBBG00000009202)	IFRD1 (ENSBBBG00000009201)	LSMEM1 (ENSBBBG00000001418)	TMEM168 (ENSBBBG00000009037)	BMT2 (ENSBBBG00000009200)	GPR85 (ENSBBBG00000009199)	SMIM30 (ENSBBBG00000009198)	PPP1R3A (ENSBBBG00000009196)	FOXP2 (ENSBBBG00000009195)	MDFIC (ENSBBBG00000025491)	TFEC (ENSBBBG00000006745) #20	TES (ENSBBBG00000025359) #21	CAV2 (ENSBBBG00000025261) #22	CAV1 (ENSBBBG00000007769) #23	ENSBBBG00000006678	ENSBBBG00000006674 #25	CAPZA2 (ENSBBBG00000025209)	ST7 (ENSBBBG00000025162)	WNT2 (ENSBBBG00000024800)	ASZ1 (ENSBBBG00000024781)	CFTR (ENSBBBG00000024730)	CTTNBP2 (ENSBBBG00000008038)	ENSBBBG00000024408
Siberian musk deer	MODERN SPECIES	88	LRRN3 (ENSMMSG00000005217)	DOCK4 (ENSMMSG00000005495)	ZNF277 (ENSMMSG00000006715)	IFRD1 (ENSMMSG00000006786)	LSMEM1 (ENSMMSG00000006885)	TMEM168 (ENSMMSG00000006914)	BMT2 (ENSMMSG00000006965)	GPR85 (ENSMMSG00000006987)	ENSMMSG00000007005	ENSMMSG00000007022	PPP1R3A (ENSMMSG00000007054)	FOXP2 (ENSMMSG00000007195)	MDFIC (ENSMMSG00000009816)	TFEC (ENSMMSG00000009921) #20	TES (ENSMMSG00000010139) #21	CAV2 (ENSMMSG00000010190) #22	CAV1 (ENSMMSG00000010219) #23	MET (ENSMMSG00000010268) #25	ENSMMSG00000010444	CAPZA2 (ENSMMSG00000010466)	ST7 (ENSMMSG00000010605)	WNT2 (ENSMMSG00000010995)	ASZ1 (ENSMMSG00000011026)	CFTR (ENSMMSG00000011163)	CTTNBP2 (ENSMMSG00000012357)	ENSMMSG00000012423	ENSMMSG00000012448	ENSMMSG00000012465	STARD3NL (ENSMMSG00000012493)	EPDR1 (ENSMMSG00000012520)	SFRP4 (ENSMMSG00000012546)
Cetacea	ANCESTRAL SPECIES	13	ENSGT00940000158619.l	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00940000158619.l	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00390000018696.ab.b	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Sperm whale	MODERN SPECIES	16	IMMP2L (ENSPCTG00005001843)	DOCK4 (ENSPCTG00005001547)	ZNF277 (ENSPCTG00005001477)	IFRD1 (ENSPCTG00005001435)	LSMEM1 (ENSPCTG00005001415)	TMEM168 (ENSPCTG00005001397)	BMT2 (ENSPCTG00005001377)	GPR85 (ENSPCTG00005001366)	SMIM30 (ENSPCTG00005001358)	PPP1R3A (ENSPCTG00005001346)	FOXP2 (ENSPCTG00005000718)	MDFIC (ENSPCTG00005000577)	ENSPCTG00005000563	TFEC (ENSPCTG00005000435) #20	TES (ENSPCTG00005000357) #21	CAV2 (ENSPCTG00005000335) #22	ENSPCTG00005000318	CAV1 (ENSPCTG00005000307) #23	MET (ENSPCTG00005000258) #25	CAPZA2 (ENSPCTG00005003893)	ST7 (ENSPCTG00005003837)	WNT2 (ENSPCTG00005003803)	ASZ1 (ENSPCTG00005003795)	CFTR (ENSPCTG00005003550)	CTTNBP2 (ENSPCTG00005003446)	LSM8 (ENSPCTG00005003422)	ENSPCTG00005003384	ENSPCTG00005003369	ENSPCTG00005003353	TSPAN12 (ENSPCTG00005003339)	ING3 (ENSPCTG00005003320)
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00940000158619.l	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00390000018696.ab.b	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00940000158619.l	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00390000018696.ab.b	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00940000158619.l	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00390000018696.ab.b	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Beluga whale	MODERN SPECIES	72	ENSDLEG00000013102	ENSDLEG00000013091	DOCK4 (ENSDLEG00000012867)	ZNF277 (ENSDLEG00000012827)	IFRD1 (ENSDLEG00000012773)	LSMEM1 (ENSDLEG00000012754)	TMEM168 (ENSDLEG00000012747)	BMT2 (ENSDLEG00000012737)	GPR85 (ENSDLEG00000012732)	PPP1R3A (ENSDLEG00000012709)	FOXP2 (ENSDLEG00000010860)	MDFIC (ENSDLEG00000010705)	ENSDLEG00000010692	TFEC (ENSDLEG00000010641) #20	TES (ENSDLEG00000010623) #21	CAV2 (ENSDLEG00000010616) #22	CAV1 (ENSDLEG00000010596) #23	MET (ENSDLEG00000010515) #25	CAPZA2 (ENSDLEG00000010489)	ST7 (ENSDLEG00000010402)	WNT2 (ENSDLEG00000010382)	ENSDLEG00000010374	ASZ1 (ENSDLEG00000010228)	CFTR (ENSDLEG00000009386)	CTTNBP2 (ENSDLEG00000009204)	LSM8 (ENSDLEG00000009162)	ENSDLEG00000009082	ENSDLEG00000009057	ENSDLEG00000009040	TSPAN12 (ENSDLEG00000009002)	ING3 (ENSDLEG00000008957)
Narwhal	MODERN SPECIES	306	ENSMMNG00015006065	DOCK4 (ENSMMNG00015006159)	ZNF277 (ENSMMNG00015006354)	IFRD1 (ENSMMNG00015006392)	LSMEM1 (ENSMMNG00015006422)	TMEM168 (ENSMMNG00015006436)	BMT2 (ENSMMNG00015006454)	GPR85 (ENSMMNG00015006484)	SMIM30 (ENSMMNG00015006497)	PPP1R3A (ENSMMNG00015006522)	FOXP2 (ENSMMNG00015006660)	MDFIC (ENSMMNG00015006992)	ENSMMNG00015007012	TFEC (ENSMMNG00015007059) #20	TES (ENSMMNG00015007124) #21	CAV2 (ENSMMNG00015007157) #22	CAV1 (ENSMMNG00015007169) #23	MET (ENSMMNG00015007208) #25	CAPZA2 (ENSMMNG00015007277)	ST7 (ENSMMNG00015007638)	ENSMMNG00015008101	WNT2 (ENSMMNG00015008114)	ASZ1 (ENSMMNG00015008132)	CFTR (ENSMMNG00015008191)	CTTNBP2 (ENSMMNG00015008242)	LSM8 (ENSMMNG00015008300)	ENSMMNG00015008326	KCND2 (ENSMMNG00015008351)	ENSMMNG00015008364	TSPAN12 (ENSMMNG00015008372)	ING3 (ENSMMNG00015008385)
Vaquita	MODERN SPECIES	20	IMMP2L (ENSPSNG00000018773)	DOCK4 (ENSPSNG00000011131)	ZNF277 (ENSPSNG00000009529)	IFRD1 (ENSPSNG00000009441)	LSMEM1 (ENSPSNG00000009413)	TMEM168 (ENSPSNG00000009377)	BMT2 (ENSPSNG00000009342)	GPR85 (ENSPSNG00000009265)	SMIM30 (ENSPSNG00000009232)	PPP1R3A (ENSPSNG00000009191)	FOXP2 (ENSPSNG00000008393)	MDFIC (ENSPSNG00000008245)	ENSPSNG00000008210	TFEC (ENSPSNG00000008020) #20	TES (ENSPSNG00000007868) #21	CAV2 (ENSPSNG00000007812) #22	CAV1 (ENSPSNG00000007757) #23	MET (ENSPSNG00000007686) #25	CAPZA2 (ENSPSNG00000007567)	ST7 (ENSPSNG00000007232)	WNT2 (ENSPSNG00000007074)	ASZ1 (ENSPSNG00000006996)	CFTR (ENSPSNG00000006540)	ENSPSNG00000006366	CTTNBP2 (ENSPSNG00000006336)	LSM8 (ENSPSNG00000006282)	ENSPSNG00000006207	ENSPSNG00000006167	KCND2 (ENSPSNG00000006128)	TSPAN12 (ENSPSNG00000006100)	ING3 (ENSPSNG00000006054)
Dolphin	MODERN SPECIES	5139															TES (ENSTTRG00000008471) #21	CAV2 (ENSTTRG00000008521) #22	CAV1 (ENSTTRG00000008528) #23
Blue whale	MODERN SPECIES	20	DOCK4 (ENSBMSG00010008221)	ZNF277 (ENSBMSG00010008077)	IFRD1 (ENSBMSG00010008058)	LSMEM1 (ENSBMSG00010008044)	TMEM168 (ENSBMSG00010008029)	BMT2 (ENSBMSG00010008021)	GPR85 (ENSBMSG00010008014)	SMIM30 (ENSBMSG00010008012)	PPP1R3A (ENSBMSG00010008008)	FOXP2 (ENSBMSG00010007623)	MDFIC (ENSBMSG00010007534)	ENSBMSG00010007525	TFEC (ENSBMSG00010007456) #20	ENSBMSG00010007423	TES (ENSBMSG00010007413) #21	CAV2 (ENSBMSG00010007399) #22	CAV1 (ENSBMSG00010007383) #23	MET (ENSBMSG00010007360) #25	CAPZA2 (ENSBMSG00010007309)	ST7 (ENSBMSG00010007217)	WNT2 (ENSBMSG00010007149)	ASZ1 (ENSBMSG00010007122)	CFTR (ENSBMSG00010007097)	CTTNBP2 (ENSBMSG00010007046)	LSM8 (ENSBMSG00010007016)	ENSBMSG00010006964	ENSBMSG00010006935	KCND2 (ENSBMSG00010006920)	TSPAN12 (ENSBMSG00010006907)	ING3 (ENSBMSG00010006892)	CPED1 (ENSBMSG00010006795)
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00390000007479.y.b	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Felidae	ANCESTRAL SPECIES	13	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00950000185696	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00390000007479.y.b	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00390000015224.c.b.b.a.b.a	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852.l	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00950000185696	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00900000143058	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00390000015224.c.b.b.a.b.a	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764
Tiger	MODERN SPECIES	296	DOCK4 (ENSPTIG00000021779)	ZNF277 (ENSPTIG00000014016)	IFRD1 (ENSPTIG00000016040)	LSMEM1 (ENSPTIG00000017446)	TMEM168 (ENSPTIG00000017855)	BMT2 (ENSPTIG00000018474)	GPR85 (ENSPTIG00000001582)	SMIM30 (ENSPTIG00000001622)	ENSPTIG00000020810	PPP1R3A (ENSPTIG00000002140)	ENSPTIG00000003248	FOXP2 (ENSPTIG00000005044)	MDFIC (ENSPTIG00000017402)	TFEC (ENSPTIG00000018257) #20	TES (ENSPTIG00000021347) #21	CAV2 (ENSPTIG00000021626) #22	CAV1 (ENSPTIG00000021784) #23	ENSPTIG00000021973	ENSPTIG00000002142 #25	CAPZA2 (ENSPTIG00000022058)	ST7 (ENSPTIG00000022098)	WNT2 (ENSPTIG00000014444)	ASZ1 (ENSPTIG00000014931)	CFTR (ENSPTIG00000017030)	ENSPTIG00000017786	CTTNBP2 (ENSPTIG00000019650)	LSM8 (ENSPTIG00000004722)	ENSPTIG00000005580	KCND2 (ENSPTIG00000006572)	TSPAN12 (ENSPTIG00000007270)	ING3 (ENSPTIG00000008202)
Panthera_a	ANCESTRAL SPECIES		ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852.l	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00950000185696	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00900000143058	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00390000015224.c.b.b.a.b.a	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764
lion	MODERN SPECIES	2	IMMP2L (ENSPLOG00000002251)	LRRN3 (ENSPLOG00000002264)	DOCK4 (ENSPLOG00000002413)	ZNF277 (ENSPLOG00000002843)	IFRD1 (ENSPLOG00000002879)	LSMEM1 (ENSPLOG00000002911)	TMEM168 (ENSPLOG00000002931)	BMT2 (ENSPLOG00000002955)	GPR85 (ENSPLOG00000002971)	SMIM30 (ENSPLOG00000002985)	PPP1R3A (ENSPLOG00000003004)	FOXP2 (ENSPLOG00000003059)	MDFIC (ENSPLOG00000003217)	TFEC (ENSPLOG00000003253) #20	TES (ENSPLOG00000003361) #21	CAV2 (ENSPLOG00000003376) #22	CAV1 (ENSPLOG00000003388) #23	ENSPLOG00000003404	CAPZA2 (ENSPLOG00000003487)	ST7 (ENSPLOG00000003747)	WNT2 (ENSPLOG00000004225)	ASZ1 (ENSPLOG00000004231)	CFTR (ENSPLOG00000004296)	CTTNBP2 (ENSPLOG00000004483)	LSM8 (ENSPLOG00000004510)	ENSPLOG00000004527	ENSPLOG00000004535	ENSPLOG00000004539	KCND2 (ENSPLOG00000004548)	TSPAN12 (ENSPLOG00000004557)	ING3 (ENSPLOG00000004574)
leopard	MODERN SPECIES	72	DOCK4 (ENSPPRG00000008571)	ENSPPRG00000008827	IFRD1 (ENSPPRG00000011002)	LSMEM1 (ENSPPRG00000011244)	TMEM168 (ENSPPRG00000011582)	BMT2 (ENSPPRG00000011666)	ENSPPRG00000012082	GPR85 (ENSPPRG00000018169)	SMIM30 (ENSPPRG00000018187)	PPP1R3A (ENSPPRG00000014441)	ENSPPRG00000014527	FOXP2 (ENSPPRG00000000808)	MDFIC (ENSPPRG00000000981)	TFEC (ENSPPRG00000001348) #20	TES (ENSPPRG00000001505) #21	CAV2 (ENSPPRG00000001790) #22	CAV1 (ENSPPRG00000001995) #23	ENSPPRG00000002566	ENSPPRG00000018383 #25	CAPZA2 (ENSPPRG00000002625)	ST7 (ENSPPRG00000004797)	WNT2 (ENSPPRG00000005517)	ASZ1 (ENSPPRG00000005580)	CFTR (ENSPPRG00000005895)	ENSPPRG00000005928	CTTNBP2 (ENSPPRG00000006253)	LSM8 (ENSPPRG00000006444)	ENSPPRG00000006566
Cat	MODERN SPECIES	1	ENSFCAG00000012739	DOCK4 (ENSFCAG00000012655)	ZNF277 (ENSFCAG00000015127)	IFRD1 (ENSFCAG00000015130)	LSMEM1 (ENSFCAG00000036448)	TMEM168 (ENSFCAG00000022031)	BMT2 (ENSFCAG00000040240)	ENSFCAG00000051776	GPR85 (ENSFCAG00000023487)	SMIM30 (ENSFCAG00000040441)	PPP1R3A (ENSFCAG00000026838)	FOXP2 (ENSFCAG00000006921)	MDFIC (ENSFCAG00000046079)	TFEC (ENSFCAG00000027627) #20	TES (ENSFCAG00000029911) #21	CAV2 (ENSFCAG00000023324) #22	CAV1 (ENSFCAG00000034785) #23	MET (ENSFCAG00000009534) #25	CAPZA2 (ENSFCAG00000027103)	ST7 (ENSFCAG00000013253)	WNT2 (ENSFCAG00000036421)	ASZ1 (ENSFCAG00000023842)	CFTR (ENSFCAG00000014955)	CTTNBP2 (ENSFCAG00000014956)	ENSFCAG00000032304	LSM8 (ENSFCAG00000036620)	ENSFCAG00000031973	ENSFCAG00000047748	ENSFCAG00000038564	KCND2 (ENSFCAG00000007877)	TSPAN12 (ENSFCAG00000023943)
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00390000007479.y.b	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Canidae	ANCESTRAL SPECIES	22	ENSGT00940000156246	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022.a #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00940000153201.j.m.a.e.a.b	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022.a #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212.q.b	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216.q.a	ENSGT00940000157480
Dingo	MODERN SPECIES	288	IFRD1 (ENSCAFG00020007150)	LSMEM1 (ENSCAFG00020007166)	TMEM168 (ENSCAFG00020007185)	BMT2 (ENSCAFG00020007194)	ENSCAFG00020007212	ENSCAFG00020007219	GPR85 (ENSCAFG00020007221)	PPP1R3A (ENSCAFG00020007242)	ENSCAFG00020007260	ENSCAFG00020007266	MDFIC (ENSCAFG00020007307)	ENSCAFG00020007316	TFEC (ENSCAFG00020007323) #20	TES (ENSCAFG00020007337) #21	ENSCAFG00020007342	CAV2 (ENSCAFG00020007355) #22	CAV1 (ENSCAFG00020007358) #23	MET (ENSCAFG00020007371) #25	CAPZA2 (ENSCAFG00020007382)	ST7 (ENSCAFG00020007405)	WNT2 (ENSCAFG00020007444)	ASZ1 (ENSCAFG00020007449)	CFTR (ENSCAFG00020007486)	CTTNBP2 (ENSCAFG00020007530)	ENSCAFG00020007643	ENSCAFG00020007647	ENSCAFG00020007658	TSPAN12 (ENSCAFG00020007671)	ENSCAFG00020007677	ENSCAFG00020007679
Dog	MODERN SPECIES	5	IMMP2L (ENSCAFG00845029926)	LRRN3 (ENSCAFG00845030033)	DOCK4 (ENSCAFG00845030164)	ENSCAFG00845030281	ZNF277 (ENSCAFG00845030295)	IFRD1 (ENSCAFG00845030316)	LSMEM1 (ENSCAFG00845030333)	TMEM168 (ENSCAFG00845030347)	BMT2 (ENSCAFG00845030359)	GPR85 (ENSCAFG00845005755)	PPP1R3A (ENSCAFG00845005952)	FOXP2 (ENSCAFG00845006016)	MDFIC (ENSCAFG00845006114)	TFEC (ENSCAFG00845006297) #20	TES (ENSCAFG00845006418) #21	CAV2 (ENSCAFG00845006745) #22	CAV1 (ENSCAFG00845006847) #23	MET (ENSCAFG00845007244) #25	CAPZA2 (ENSCAFG00845007934)	ST7 (ENSCAFG00845008329)	WNT2 (ENSCAFG00845008849)	ASZ1 (ENSCAFG00845008921)	CFTR (ENSCAFG00845009171)	ENSCAFG00845010283	ENSCAFG00845010332	ENSCAFG00845010446	TSPAN12 (ENSCAFG00845010513)	ING3 (ENSCAFG00845010632)	CPED1 (ENSCAFG00845010739)	WNT16 (ENSCAFG00845010924)	FAM3C (ENSCAFG00845010960)
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00390000007479.y.b.a	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000153661.b.b.m	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00390000007479.y.b.a	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000153661.b.b.m	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764
Ferret	MODERN SPECIES	168	DOCK4 (ENSMPUG00000007755)	ZNF277 (ENSMPUG00000007745)	IFRD1 (ENSMPUG00000007734)	ENSMPUG00000007729	TMEM168 (ENSMPUG00000007725)	BMT2 (ENSMPUG00000007694)	GPR85 (ENSMPUG00000018747)	ENSMPUG00000007687	ENSMPUG00000018745	PPP1R3A (ENSMPUG00000007681)	FOXP2 (ENSMPUG00000007316)	MDFIC (ENSMPUG00000007309)	ENSMPUG00000007300	TFEC (ENSMPUG00000007248) #20	TES (ENSMPUG00000007238) #21	CAV2 (ENSMPUG00000007232) #22	CAV1 (ENSMPUG00000007224) #23	MET (ENSMPUG00000007199) #25	ST7 (ENSMPUG00000007184)	WNT2 (ENSMPUG00000007172)	ASZ1 (ENSMPUG00000007155)	CFTR (ENSMPUG00000007138)	CTTNBP2 (ENSMPUG00000007124)	ENSMPUG00000007110	ENSMPUG00000007100	ENSMPUG00000007093	ENSMPUG00000007078	KCND2 (ENSMPUG00000007070)	ENSMPUG00000007063	TSPAN12 (ENSMPUG00000007059)	ING3 (ENSMPUG00000007054)
American mink	MODERN SPECIES	3											PPP1R3A (ENSNVIG00000003288)	FOXP2 (ENSNVIG00000002817)	MDFIC (ENSNVIG00000002794)	TFEC (ENSNVIG00000002689) #20	TES (ENSNVIG00000002631) #21	CAV2 (ENSNVIG00000002622) #22	CAV1 (ENSNVIG00000002597) #23	ENSNVIG00000002563	ENSNVIG00000002532 #25	CAPZA2 (ENSNVIG00000002498)	ST7 (ENSNVIG00000002263)	WNT2 (ENSNVIG00000002216)	ASZ1 (ENSNVIG00000002205)	CFTR (ENSNVIG00000002052)	CTTNBP2 (ENSNVIG00000002011)	LSM8 (ENSNVIG00000001976)	ENSNVIG00000001960	ENSNVIG00000001954	KCND2 (ENSNVIG00000001932)	TSN12 (ENSNVIG00000001909)	ING3 (ENSNVIG00000001859)
Ursidae	ANCESTRAL SPECIES	12	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685.c	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT01010000229956	ENSGT00510000047764
Giant Panda	MODERN SPECIES		IMMP2L (ENSAMEG00000005862)	LRRN3 (ENSAMEG00000019119)	DOCK4 (ENSAMEG00000005704)	ZNF277 (ENSAMEG00000005673)	IFRD1 (ENSAMEG00000005639)	LSMEM1 (ENSAMEG00000005637)	TMEM168 (ENSAMEG00000005625)	BMT2 (ENSAMEG00000005614)	GPR85 (ENSAMEG00000005604)	SMIM30 (ENSAMEG00000019099)	PPP1R3A (ENSAMEG00000002577)	FOXP2 (ENSAMEG00000002526)	MDFIC (ENSAMEG00000027010)	TFEC (ENSAMEG00000018238) #20	TES (ENSAMEG00000018237) #21	CAV2 (ENSAMEG00000029109) #22	CAV1 (ENSAMEG00000027933) #23	MET (ENSAMEG00000001314) #25	CAPZA2 (ENSAMEG00000001306)	ST7 (ENSAMEG00000001267)	WNT2 (ENSAMEG00000001256)	ASZ1 (ENSAMEG00000001244)	CFTR (ENSAMEG00000001184)	CTTNBP2 (ENSAMEG00000001163)	LSM8 (ENSAMEG00000001162)	ENSAMEG00000001159	ENSAMEG00000027977	ENSAMEG00000031336	KCND2 (ENSAMEG00000020256)	ENSAMEG00000029289	TSPAN12 (ENSAMEG00000005955)
Ursus	ANCESTRAL SPECIES	82														ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293.i	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Polar bear	MODERN SPECIES	281														TFEC (ENSUMAG00000002162) #20	TES (ENSUMAG00000002178) #21	ENSUMAG00000002184 #22	CAV1 (ENSUMAG00000002191) #23	MET (ENSUMAG00000002307) #25	CAPZA2 (ENSUMAG00000002886)	ST7 (ENSUMAG00000002912)	WNT2 (ENSUMAG00000002965)	ASZ1 (ENSUMAG00000002973)	CFTR (ENSUMAG00000003001)	CTTNBP2 (ENSUMAG00000003029)	LSM8 (ENSUMAG00000003073)	ENSUMAG00000003079	ENSUMAG00000003108	ENSUMAG00000003110	TSPAN12 (ENSUMAG00000003123)	ING3 (ENSUMAG00000003142)	CPED1 (ENSUMAG00000003165)
American black bear	MODERN SPECIES	6														TFEC (ENSUAMG00000007235) #20	TES (ENSUAMG00000007237) #21	CAV2 (ENSUAMG00000007241) #22	CAV1 (ENSUAMG00000007242) #23	MET (ENSUAMG00000007304) #25	CAPZA2 (ENSUAMG00000007803)	ST7 (ENSUAMG00000007814)	WNT2 (ENSUAMG00000007859)	ASZ1 (ENSUAMG00000007870)	CFTR (ENSUAMG00000007890)	ENSUAMG00000007915
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Equus	ANCESTRAL SPECIES	13	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Horse	MODERN SPECIES	25	LRRN3 (ENSECAG00000015351)	DOCK4 (ENSECAG00000017003)	ZNF277 (ENSECAG00000019865)	IFRD1 (ENSECAG00000009921)	LSMEM1 (ENSECAG00000020860)	TMEM168 (ENSECAG00000021172)	BMT2 (ENSECAG00000021680)	GPR85 (ENSECAG00000032483)	ENSECAG00000051099	ENSECAG00000051680	PPP1R3A (ENSECAG00000023243)	FOXP2 (ENSECAG00000023867)	MDFIC (ENSECAG00000013772)	TFEC (ENSECAG00000013937) #20	TES (ENSECAG00000016917) #21	CAV2 (ENSECAG00000037857) #22	CAV1 (ENSECAG00000009134) #23	MET (ENSECAG00000010385) #25	CAPZA2 (ENSECAG00000021693)	ST7 (ENSECAG00000008375)	ENSECAG00000059035	WNT2 (ENSECAG00000024641)	ENSECAG00000043879	ASZ1 (ENSECAG00000011002)	CFTR (ENSECAG00000009139)	CTTNBP2 (ENSECAG00000025076)	LSM8 (ENSECAG00000024025)	KCND2 (ENSECAG00000002703)	TSPAN12 (ENSECAG00000001545)	ING3 (ENSECAG00000008147)	CPED1 (ENSECAG00000017094)
Donkey	MODERN SPECIES		LRRN3 (ENSEASG00005004076)	ENSEASG00005004080	DOCK4 (ENSEASG00005004904)	ZNF277 (ENSEASG00005008780)	IFRD1 (ENSEASG00005008784)	LSMEM1 (ENSEASG00005032179)	TMEM168 (ENSEASG00005008791)	BMT2 (ENSEASG00005037070)	GPR85 (ENSEASG00005031028)	SMIM30 (ENSEASG00005004307)	PPP1R3A (ENSEASG00005008800)	FOXP2 (ENSEASG00005008813)	MDFIC (ENSEASG00005025429)	TFEC (ENSEASG00005036487) #20	TES (ENSEASG00005008832) #21	ENSEASG00005034179 #22	CAV1 (ENSEASG00005030696) #23	MET (ENSEASG00005008840) #25	CAPZA2 (ENSEASG00005008845)	ST7 (ENSEASG00005008859)	WNT2 (ENSEASG00005008889)	ASZ1 (ENSEASG00005008894)	CFTR (ENSEASG00005008909)	CTTNBP2 (ENSEASG00005008929)	LSM8 (ENSEASG00005027658)	ENSEASG00005008937	KCND2 (ENSEASG00005008938)	TSPAN12 (ENSEASG00005008941)	ING3 (ENSEASG00005008942)	ENSEASG00005028595	ENSEASG00005008958
Chiroptera	ANCESTRAL SPECIES	41								ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Microchiroptera	ANCESTRAL SPECIES	23								ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Greater horseshoe bat	MODERN SPECIES	18				ENSRFEG00010020008	TMEM168 (ENSRFEG00010019981)	BMT2 (ENSRFEG00010019948)	GPR85 (ENSRFEG00010019929)	SMIM30 (ENSRFEG00010019921)	ENSRFEG00010019896	PPP1R3A (ENSRFEG00010019863)	FOXP2 (ENSRFEG00010019612)	MDFIC (ENSRFEG00010019544)	TFEC (ENSRFEG00010019376) #20	ENSRFEG00010019318	TES (ENSRFEG00010019300) #21	CAV2 (ENSRFEG00010019273) #22	CAV1 (ENSRFEG00010019224) #23	MET (ENSRFEG00010019152) #25	CAPZA2 (ENSRFEG00010019032)	ST7 (ENSRFEG00010018747)	WNT2 (ENSRFEG00010018681)	ASZ1 (ENSRFEG00010018560)	ENSRFEG00010018517	CFTR (ENSRFEG00010017672)	CTTNBP2 (ENSRFEG00010017601)	ENSRFEG00010017515	ENSRFEG00010017376	ENSRFEG00010017356	ENSRFEG00010017340	KCND2 (ENSRFEG00010017250)	TSPAN12 (ENSRFEG00010017208)
Microbat	MODERN SPECIES	1238															TES (ENSMLUG00000013747) #21	CAV2 (ENSMLUG00000017680) #22	MET (ENSMLUG00000007884) #25	CAPZA2 (ENSMLUG00000007910)	ST7 (ENSMLUG00000015327)	ENSMLUG00000027970	WNT2 (ENSMLUG00000015342)	ASZ1 (ENSMLUG00000012237)
Megabat	MODERN SPECIES	3856																CAV2 (ENSPVAG00000012328) #22	CAV1 (ENSPVAG00000012329) #23	MET (ENSPVAG00000012330) #25
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00940000156246	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00940000156246	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00940000156246	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Elephant	MODERN SPECIES	428	ENSLAFG00000006070	LRRN3 (ENSLAFG00000013678)	DOCK4 (ENSLAFG00000016692)	ZNF277 (ENSLAFG00000004008)	IFRD1 (ENSLAFG00000004167)	LSMEM1 (ENSLAFG00000017228)	TMEM168 (ENSLAFG00000009688)	BMT2 (ENSLAFG00000027849)	GPR85 (ENSLAFG00000012553)	PPP1R3A (ENSLAFG00000009257)	FOXP2 (ENSLAFG00000012661)	MDFIC (ENSLAFG00000013504)	ENSLAFG00000017267 #20	ENSLAFG00000031865 #20	TES (ENSLAFG00000017268) #21	CAV2 (ENSLAFG00000015065) #22	CAV1 (ENSLAFG00000028864) #23	MET (ENSLAFG00000011703) #25	CAPZA2 (ENSLAFG00000007766)	ST7 (ENSLAFG00000016129)	WNT2 (ENSLAFG00000022699)	ASZ1 (ENSLAFG00000005746)	CFTR (ENSLAFG00000005753)	CTTNBP2 (ENSLAFG00000005761)	LSM8 (ENSLAFG00000011242)	ENSLAFG00000011244	KCND2 (ENSLAFG00000008593)	TSPAN12 (ENSLAFG00000004689)	ING3 (ENSLAFG00000030488)	ENSLAFG00000032200	ENSLAFG00000005279
Hyrax	MODERN SPECIES	652																CAV2 (ENSPCAG00000006589) #22	CAV1 (ENSPCAG00000006603) #23
Tenrec	MODERN SPECIES	907																CAV2 (ENSETEG00000011934) #22	CAV1 (ENSETEG00000011937) #23
Xenarthra	ANCESTRAL SPECIES																	ENSGT00950000183006.A.b #22
Sloth	DUPLICATION
Sloth	MODERN SPECIES	12767																ENSCHOG00000003184 #22
Sloth	MODERN SPECIES	12671																ENSCHOG00000012607 #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000156246	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000161777.a	ENSGT00940000153661.b	ENSGT00940000161777.b	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00940000156246	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b.c	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661.b.f	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.e.b	ENSGT00940000161777.b
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00940000162392	ENSGT00940000156246	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b.c	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661.b.f	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.e.b	ENSGT00940000161777.b
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00940000160513	ENSGT00940000153311.a.b.a.h	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00950000182989.D.a.b.i.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b.c	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661.b.f	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.e.b.c	ENSGT00940000161777.b
Common wonbat	MODERN SPECIES	1132														TFEC (ENSVURG00010019984) #20	TES (ENSVURG00010020012) #21	CAV2 (ENSVURG00010020019) #22	CAV1 (ENSVURG00010020024) #23	MET (ENSVURG00010020038) #25	ENSVURG00010020055	ENSVURG00010020061	ENSVURG00010020064	CAPZA2 (ENSVURG00010020077)	ENSVURG00010020091	ST7 (ENSVURG00010020104)	WNT2 (ENSVURG00010020146)	ASZ1 (ENSVURG00010020160)	CFTR (ENSVURG00010020201)	CTTNBP2 (ENSVURG00010020262)	ENSVURG00010020288	LSM8 (ENSVURG00010020298)	ENSVURG00010020323
koala	MODERN SPECIES	372															TES (ENSPCIG00000019487) #21	CAV2 (ENSPCIG00000005152) #22	CAV1 (ENSPCIG00000005161) #23	MET (ENSPCIG00000005176) #25	CAPZA2 (ENSPCIG00000005213)	ENSPCIG00000033961
Tasmanian devil	MODERN SPECIES	4	DNAJB9 (ENSSHAG00000026022)	LRRN3 (ENSSHAG00000021075)	ENSSHAG00000023333	ENSSHAG00000021647	DOCK4 (ENSSHAG00000010479)	ZNF277 (ENSSHAG00000013241)	IFRD1 (ENSSHAG00000014390)	LSMEM1 (ENSSHAG00000014571)	GPR85 (ENSSHAG00000029175)	PPP1R3A (ENSSHAG00000017954)	FOXP2 (ENSSHAG00000018566)	MDFIC (ENSSHAG00000018830)	ENSSHAG00000010737	TFEC (ENSSHAG00000012198) #20	TES (ENSSHAG00000013689) #21	ENSSHAG00000020716 #22	CAV1 (ENSSHAG00000030626) #23	MET (ENSSHAG00000015881) #25	CAPZA2 (ENSSHAG00000022040)	ST7 (ENSSHAG00000016896)	WNT2 (ENSSHAG00000017186)	ASZ1 (ENSSHAG00000017307)	CFTR (ENSSHAG00000030052)	CTTNBP2 (ENSSHAG00000017847)	LSM8 (ENSSHAG00000023318)	ENSSHAG00000018617	ENSSHAG00000026856	ENSSHAG00000018547	KCND2 (ENSSHAG00000007231)	TSPAN12 (ENSSHAG00000012139)	ING3 (ENSSHAG00000013063)
Opossum	MODERN SPECIES	7	DOCK4 (ENSMODG00000015971)	ZNF277 (ENSMODG00000015922)	IFRD1 (ENSMODG00000015916)	LSMEM1 (ENSMODG00000015919)	TMEM168 (ENSMODG00000015899)	BMT2 (ENSMODG00000038822)	GPR85 (ENSMODG00000024555)	PPP1R3A (ENSMODG00000015871)	FOXP2 (ENSMODG00000015863)	ENSMODG00000046094	MDFIC (ENSMODG00000015856)	ENSMODG00000038037	ENSMODG00000045482	ENSMODG00000015845 #20	TES (ENSMODG00000015840) #21	CAV2 (ENSMODG00000047495) #22	CAV1 (ENSMODG00000015826) #23	MET (ENSMODG00000015822) #25	CAPZA2 (ENSMODG00000041408)	ST7 (ENSMODG00000015806)	WNT2 (ENSMODG00000015792)	ASZ1 (ENSMODG00000015784)	CFTR (ENSMODG00000015771)	CTTNBP2 (ENSMODG00000015754)	LSM8 (ENSMODG00000015729)	ENSMODG00000015735	ENSMODG00000027321	ENSMODG00000015525	ENSMODG00000024541	ENSMODG00000042953	ENSMODG00000015511
Platypus	MODERN SPECIES	1	THAP5 (ENSOANG00000007047)	PNPLA8 (ENSOANG00000041887)	ENSOANG00000050120	NRCAM (ENSOANG00000003547)	IFRD1 (ENSOANG00000009631)	LSMEM1 (ENSOANG00000042933)	TMEM168 (ENSOANG00000003545)	GPR85 (ENSOANG00000015237)	SMIM30 (ENSOANG00000037282)	ENSOANG00000001554	ENSOANG00000041865	FOXP2 (ENSOANG00000001697)	MDFIC (ENSOANG00000044059)	TFEC (ENSOANG00000014094) #20	TES (ENSOANG00000014092) #21	ENSOANG00000036116 #22	CAV1 (ENSOANG00000048557) #23	MET (ENSOANG00000015031) #25	CAPZA2 (ENSOANG00000038071)	ST7 (ENSOANG00000008765)	WNT2 (ENSOANG00000008766)	ASZ1 (ENSOANG00000031342)	CFTR (ENSOANG00000008767)	CTTNBP2 (ENSOANG00000021090)	LSM8 (ENSOANG00000049504)	ENSOANG00000008771	ENSOANG00000011984	ENSOANG00000039010	TSPAN12 (ENSOANG00000049624)	ING3 (ENSOANG00000043175)	CPED1 (ENSOANG00000005654)
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00940000153629.a.b	ENSGT00940000158528
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT01000000221197	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00510000047764
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT01000000221197	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Aves	ANCESTRAL SPECIES	1	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Neognathae	ANCESTRAL SPECIES	3	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Japanese quail	MODERN SPECIES		DOCK4 (ENSCJPG00005013377)	ZNF277 (ENSCJPG00005013376)	IFRD1 (ENSCJPG00005013374)	LSMEM1 (ENSCJPG00005013373)	TMEM168 (ENSCJPG00005013370)	ENSCJPG00005013369	BMT2 (ENSCJPG00005013368)	GPR85 (ENSCJPG00005013366)	ENSCJPG00005013364	PPP1R3A (ENSCJPG00005013360)	ENSCJPG00005013359	FOXP2 (ENSCJPG00005012184)	MDFIC (ENSCJPG00005012181)	TFEC (ENSCJPG00005012178) #20	TES (ENSCJPG00005012177) #21	CAV2 (ENSCJPG00005012172) #22	CAV1 (ENSCJPG00005012171) #23	MET (ENSCJPG00005012168) #25	CAPZA2 (ENSCJPG00005012167)	ST7 (ENSCJPG00005012165)	WNT2 (ENSCJPG00005012164)	ASZ1 (ENSCJPG00005012161)	CFTR (ENSCJPG00005012155)	CTTNBP2 (ENSCJPG00005012154)	LSM8 (ENSCJPG00005012150)	KCND2 (ENSCJPG00005012143)	TSPAN12 (ENSCJPG00005012142)	ING3 (ENSCJPG00005012141)	ENSCJPG00005012139	ENSCJPG00005012137	POT1 (ENSCJPG00005012128)
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Chicken	MODERN SPECIES		IMMP2L (ENSGALG00010001367)	DOCK4 (ENSGALG00010001298)	LRRN3 (ENSGALG00010001281)	ZNF277 (ENSGALG00010001251)	IFRD1 (ENSGALG00010001198)	LSMEM1 (ENSGALG00010001196)	TMEM168 (ENSGALG00010001479)	BMT2 (ENSGALG00010001475)	GPR85 (ENSGALG00010001470)	PPP1R3A (ENSGALG00010001526)	ENSGALG00010001519	FOXP2 (ENSGALG00010001407)	MDFIC (ENSGALG00010001381)	TFEC (ENSGALG00010001219) #20	TES (ENSGALG00010001214) #21	CAV2 (ENSGALG00010001517) #22	CAV1 (ENSGALG00010002285) #23	MET (ENSGALG00010001514) #25	CAPZA2 (ENSGALG00010001501)	ENSGALG00010001492	ST7 (ENSGALG00010002280)	WNT2 (ENSGALG00010001486)	ASZ1 (ENSGALG00010001207)	CFTR (ENSGALG00010001202)	CTTNBP2 (ENSGALG00010001200)	LSM8 (ENSGALG00010001456)	ANKRD26 (ENSGALG00010001443)	ENSGALG00010001421	KCND2 (ENSGALG00010001419)	TSPAN12 (ENSGALG00010001232)	ING3 (ENSGALG00010001349)
Anatidae	ANCESTRAL SPECIES	14	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000166634	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a
Pink-footed goose	MODERN SPECIES	26	ZNF277 (ENSABRG00000005765)	IFRD1 (ENSABRG00000005788)	LSMEM1 (ENSABRG00000005799)	TMEM168 (ENSABRG00000005810)	BMT2 (ENSABRG00000005814)	GPR85 (ENSABRG00000005817)	ENSABRG00000005822	ENSABRG00000005826	PPP1R3A (ENSABRG00000005835)	ENSABRG00000005840	ENSABRG00000005855	FOXP2 (ENSABRG00000005866)	MDFIC (ENSABRG00000005916)	TFEC (ENSABRG00000005925) #20	TES (ENSABRG00000005946) #21	CAV2 (ENSABRG00000005970) #22	CAV1 (ENSABRG00000005979) #23	MET (ENSABRG00000005986) #25	CAPZA2 (ENSABRG00000006030)	ST7 (ENSABRG00000006054)	WNT2 (ENSABRG00000006091)	ASZ1 (ENSABRG00000006101)	CFTR (ENSABRG00000006122)	CTTNBP2 (ENSABRG00000006157)	LSM8 (ENSABRG00000006189)
Duck	MODERN SPECIES		DOCK4 (ENSAPLG00000007085)	ZNF277 (ENSAPLG00000013207)	IFRD1 (ENSAPLG00000012860)	LSMEM1 (ENSAPLG00000012853)	TMEM168 (ENSAPLG00000018062)	BMT2 (ENSAPLG00000012673)	GPR85 (ENSAPLG00000001986)	ENSAPLG00000027063	ENSAPLG00000017927	PPP1R3A (ENSAPLG00000029187)	ENSAPLG00000016789	FOXP2 (ENSAPLG00000012306)	MDFIC (ENSAPLG00000012299)	TFEC (ENSAPLG00000012143) #20	TES (ENSAPLG00000012062) #21	CAV2 (ENSAPLG00000026342) #22	CAV1 (ENSAPLG00000001978) #23	MET (ENSAPLG00000010894) #25	CAPZA2 (ENSAPLG00000021156)	ST7 (ENSAPLG00000010396)	WNT2 (ENSAPLG00000003242)	ENSAPLG00000029683	CFTR (ENSAPLG00000011156)	CTTNBP2 (ENSAPLG00000010400)	ENSAPLG00000004753	LSM8 (ENSAPLG00000005115)	ENSAPLG00000027810	ENSAPLG00000017686	ENSAPLG00000031003	ENSAPLG00000021328	TSPAN12 (ENSAPLG00000002596)
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.a.b #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.a.a #21	ENSGT00940000155993.a.b #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Flycatcher	MODERN SPECIES	10	DOCK4 (ENSFALG00000009372)	ZNF277 (ENSFALG00000009493)	ENSFALG00000028281	ENSFALG00000009496	LSMEM1 (ENSFALG00000023344)	TMEM168 (ENSFALG00000027706)	BMT2 (ENSFALG00000023523)	GPR85 (ENSFALG00000015101)	ENSFALG00000025860	PPP1R3A (ENSFALG00000009525)	ENSFALG00000027247	FOXP2 (ENSFALG00000024389)	ENSFALG00000010139	TFEC (ENSFALG00000025375) #20	TES (ENSFALG00000010124) #21	CAV2 (ENSFALG00000027178) #22	CAV1 (ENSFALG00000010117) #23	MET (ENSFALG00000010094) #25	CAPZA2 (ENSFALG00000025088)	ST7 (ENSFALG00000010057)	WNT2 (ENSFALG00000024891)	ASZ1 (ENSFALG00000010054)	CFTR (ENSFALG00000010051)	CTTNBP2 (ENSFALG00000010036)	LSM8 (ENSFALG00000023574)	ENSFALG00000025919	ENSFALG00000028483	ENSFALG00000026847	KCND2 (ENSFALG00000010001)	TSPAN12 (ENSFALG00000009987)	ING3 (ENSFALG00000009971)
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.a.a #21	ENSGT00940000155993.a.b #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Medium ground finch	MODERN SPECIES	27											FOXP2 (ENSGFOG00000008787)	MDFIC (ENSGFOG00000008858)	TFEC (ENSGFOG00000008861) #20	ENSGFOG00000008870 #21	ENSGFOG00000008873 #21	CAV2 (ENSGFOG00000008881) #22	CAV1 (ENSGFOG00000008885) #23	MET (ENSGFOG00000008894) #25	CAPZA2 (ENSGFOG00000008927)	ST7 (ENSGFOG00000008942)	WNT2 (ENSGFOG00000008973)	CFTR (ENSGFOG00000009036)	CTTNBP2 (ENSGFOG00000011589)	LSM8 (ENSGFOG00000011878)	ENSGFOG00000011895	TSPAN12 (ENSGFOG00000011959)	ING3 (ENSGFOG00000011963)	CPED1 (ENSGFOG00000011981)	WNT16 (ENSGFOG00000012022)	FAM3C (ENSGFOG00000012026)	PTPRZ1 (ENSGFOG00000012035)
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993.a.b #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Zebra finch	MODERN SPECIES	11	DNAJB9 (ENSTGUG00000005595)	LRRN3 (ENSTGUG00000005590)	DOCK4 (ENSTGUG00000005488)	ZNF277 (ENSTGUG00000027318)	LSMEM1 (ENSTGUG00000005427)	IFRD1 (ENSTGUG00000005429)	TMEM168 (ENSTGUG00000005419)	BMT2 (ENSTGUG00000029134)	GPR85 (ENSTGUG00000027748)	PPP1R3A (ENSTGUG00000022324)	ENSTGUG00000019142	FoxP2 (ENSTGUG00000005315)	MDFIC (ENSTGUG00000005311)	TFEC (ENSTGUG00000025154) #20	TES (ENSTGUG00000005272) #21	CAV2 (ENSTGUG00000028946) #22	CAV1 (ENSTGUG00000021482) #23	MET (ENSTGUG00000005136) #25	CAPZA2 (ENSTGUG00000021964)	ST7 (ENSTGUG00000005050)	ENSTGUG00000024421	WNT2 (ENSTGUG00000005016)	ASZ1 (ENSTGUG00000004962)	CFTR (ENSTGUG00000004828)	CTTNBP2 (ENSTGUG00000004732)	LSM8 (ENSTGUG00000028972)	ENSTGUG00000019694	KCND2 (ENSTGUG00000004691)	TSPAN12 (ENSTGUG00000004668)	ING3 (ENSTGUG00000004655)	CPED1 (ENSTGUG00000004646)
Common canary	MODERN SPECIES	6	ENSSCAG00000009212	CPM (ENSSCAG00000009225)	MDM2 (ENSSCAG00000009237)	SLC35E3 (ENSSCAG00000009248)	NUP107 (ENSSCAG00000009262)	RAP1B (ENSSCAG00000009270)	TMEM168 (ENSSCAG00000009271)	BMT2 (ENSSCAG00000009277)	GPR85 (ENSSCAG00000009290)	PPP1R3A (ENSSCAG00000009300)	ENSSCAG00000009306	FOXP2 (ENSSCAG00000009355)	MDFIC (ENSSCAG00000009429)	TFEC (ENSSCAG00000009440) #20	TES (ENSSCAG00000009450) #21	CAV2 (ENSSCAG00000009464) #22	CAV1 (ENSSCAG00000009469) #23	MET (ENSSCAG00000009475) #25	CAPZA2 (ENSSCAG00000009492)	ST7 (ENSSCAG00000009507)	WNT2 (ENSSCAG00000009523)	ENSSCAG00000009534	CFTR (ENSSCAG00000009670)	CTTNBP2 (ENSSCAG00000010165)	LSM8 (ENSSCAG00000000112)	ENSSCAG00000000121	ENSSCAG00000000133	KCND2 (ENSSCAG00000000182)	TSPAN12 (ENSSCAG00000000213)	ING3 (ENSSCAG00000000233)	CPED1 (ENSSCAG00000000269)
Great tit	MODERN SPECIES	10	ENSPMJG00000010771	DOCK4 (ENSPMJG00000010713)	ZNF277 (ENSPMJG00000010696)	IFRD1 (ENSPMJG00000010691)	LSMEM1 (ENSPMJG00000010690)	TMEM168 (ENSPMJG00000010660)	BMT2 (ENSPMJG00000010659)	GPR85 (ENSPMJG00000010658)	ENSPMJG00000010575	PPP1R3A (ENSPMJG00000010574)	ENSPMJG00000010571	FOXP2 (ENSPMJG00000010367)	MDFIC (ENSPMJG00000010365)	TFEC (ENSPMJG00000010298) #20	TES (ENSPMJG00000010232) #21	CAV2 (ENSPMJG00000010228) #22	CAV1 (ENSPMJG00000010227) #23	MET (ENSPMJG00000010222) #25	CAPZA2 (ENSPMJG00000010167)	ST7 (ENSPMJG00000010160)	WNT2 (ENSPMJG00000010142)	ASZ1 (ENSPMJG00000010138)	CFTR (ENSPMJG00000010133)	CTTNBP2 (ENSPMJG00000010132)	LSM8 (ENSPMJG00000010122)	ENSPMJG00000010120	ENSPMJG00000010089	ENSPMJG00000010076	TSPAN12 (ENSPMJG00000010063)	ING3 (ENSPMJG00000010056)	CPED1 (ENSPMJG00000010048)
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982.sd.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216.l	ENSGT00940000157480
Kakapo	MODERN SPECIES	20	ENSSHBG00005017904	DOCK4 (ENSSHBG00005012433)	ZNF277 (ENSSHBG00005011381)	IFRD1 (ENSSHBG00005011357)	LSMEM1 (ENSSHBG00005011202)	TMEM168 (ENSSHBG00005011135)	BMT2 (ENSSHBG00005011105)	GPR85 (ENSSHBG00005011076)	PPP1R3A (ENSSHBG00005011003)	ENSSHBG00005010981	ENSSHBG00005010949	FOXP2 (ENSSHBG00005010906)	MDFIC (ENSSHBG00005010864)	TFEC (ENSSHBG00005010824) #20	TES (ENSSHBG00005010796) #21	CAV2 (ENSSHBG00005010753) #22	CAV1 (ENSSHBG00005010735) #23	MET (ENSSHBG00005009888) #25	CAPZA2 (ENSSHBG00005009748)	ST7 (ENSSHBG00005009717)	WNT2 (ENSSHBG00005009667)	ASZ1 (ENSSHBG00005009632)	CFTR (ENSSHBG00005009547)	ENSSHBG00005009503	ENSSHBG00005009496	ENSSHBG00005009480	LSM8 (ENSSHBG00005009461)	ENSSHBG00005009388	ENSSHBG00005009348	ENSSHBG00005009339	KCND2 (ENSSHBG00005009311)
Golden eagle	MODERN SPECIES	21	ZNF277 (ENSACCG00020013790)	IFRD1 (ENSACCG00020013708)	LSMEM1 (ENSACCG00020013678)	TMEM168 (ENSACCG00020013650)	BMT2 (ENSACCG00020013620)	GPR85 (ENSACCG00020013608)	SMIM30 (ENSACCG00020013593)	PPP1R3A (ENSACCG00020013582)	ENSACCG00020013563	ENSACCG00020013550	FOXP2 (ENSACCG00020013527)	MDFIC (ENSACCG00020013495)	TFEC (ENSACCG00020013475) #20	ENSACCG00020013448	TES (ENSACCG00020013418) #21	CAV2 (ENSACCG00020013411) #22	CAV1 (ENSACCG00020013402) #23	MET (ENSACCG00020013383) #25	CAPZA2 (ENSACCG00020013367)	ST7 (ENSACCG00020013343)	WNT2 (ENSACCG00020013296)	ENSACCG00020013258	CFTR (ENSACCG00020013240)	CTTNBP2 (ENSACCG00020013195)	LSM8 (ENSACCG00020013148)	ENSACCG00020013129	ENSACCG00020013093	KCND2 (ENSACCG00020013078)	TSPAN12 (ENSACCG00020013048)	ING3 (ENSACCG00020013015)	CPED1 (ENSACCG00020012968)
African ostrich	MODERN SPECIES	222	IFRD1 (ENSSCUG00000004401)	LSMEM1 (ENSSCUG00000004400)	TMEM168 (ENSSCUG00000004395)	BMT2 (ENSSCUG00000004394)	GPR85 (ENSSCUG00000004392)	SMIM30 (ENSSCUG00000004391)	PPP1R3A (ENSSCUG00000004388)	ENSSCUG00000004387	ENSSCUG00000004386	FOXP2 (ENSSCUG00000004384)	ENSSCUG00000004383	MDFIC (ENSSCUG00000004382)	TFEC (ENSSCUG00000004379) #20	TES (ENSSCUG00000004376) #21	ENSSCUG00000004375	CAV2 (ENSSCUG00000004372) #22	CAV1 (ENSSCUG00000004371) #23	MET (ENSSCUG00000004369) #25	CAPZA2 (ENSSCUG00000004368)	ST7 (ENSSCUG00000004335)	WNT2 (ENSSCUG00000004314)	ASZ1 (ENSSCUG00000004312)	ENSSCUG00000004311	CFTR (ENSSCUG00000004308)	CTTNBP2 (ENSSCUG00000004304)	LSM8 (ENSSCUG00000004301)	ENSSCUG00000004296
Australian saltwater crocodile	MODERN SPECIES	49	ZNF277 (ENSCPRG00005009870)	IFRD1 (ENSCPRG00005009878)	LSMEM1 (ENSCPRG00005009897)	TMEM168 (ENSCPRG00005009933)	BMT2 (ENSCPRG00005009935)	GPR85 (ENSCPRG00005009958)	ENSCPRG00005009959	ENSCPRG00005009962	PPP1R3A (ENSCPRG00005009984)	ENSCPRG00005009987	FOXP2 (ENSCPRG00005010026)	MDFIC (ENSCPRG00005010050)	ENSCPRG00005010086	TFEC (ENSCPRG00005010099) #20	TES (ENSCPRG00005010118) #21	CAV2 (ENSCPRG00005010121) #22	CAV1 (ENSCPRG00005010126) #23	MET (ENSCPRG00005010146) #25	CAPZA2 (ENSCPRG00005010284)	ENSCPRG00005010321	ST7 (ENSCPRG00005010327)	WNT2 (ENSCPRG00005010348)	ASZ1 (ENSCPRG00005010351)	CFTR (ENSCPRG00005010391)	CTTNBP2 (ENSCPRG00005010434)	LSM8 (ENSCPRG00005010480)	ENSCPRG00005010484	ENSCPRG00005010524	ENSCPRG00005010585	KCND2 (ENSCPRG00005010626)	TSPAN12 (ENSCPRG00005010654)
Cryptodira	ANCESTRAL SPECIES	11	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT01000000221197	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT01000000221197	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619
Emydidae	ANCESTRAL SPECIES	10	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
painted turtle	MODERN SPECIES	7	ARHGAP28 (ENSCPBG00000006810)	TMEM200C (ENSCPBG00000006823)	EPB41L3 (ENSCPBG00000006846)	ZBTB14 (ENSCPBG00000006929)	AKAIN1 (ENSCPBG00000006937)	DLGAP1 (ENSCPBG00000006952)	TGIF1 (ENSCPBG00000006961)	ENSCPBG00000006966	ENSCPBG00000006970	MYOM1 (ENSCPBG00000007000)	PPP1R3A (ENSCPBG00000007087)	FOXP2 (ENSCPBG00000007098)	MDFIC (ENSCPBG00000007111)	TFEC (ENSCPBG00000007125) #20	TES (ENSCPBG00000007139) #21	CAV2 (ENSCPBG00000007156) #22	CAV1 (ENSCPBG00000007159) #23	MET (ENSCPBG00000007168) #25	CAPZA2 (ENSCPBG00000007179)	ST7 (ENSCPBG00000007194)	WNT2 (ENSCPBG00000007227)	ASZ1 (ENSCPBG00000007263)	CFTR (ENSCPBG00000007379)	ENSCPBG00000008123	ENSCPBG00000008135	LSM8 (ENSCPBG00000008154)	ENSCPBG00000008183	ENSCPBG00000008248	ENSCPBG00000008257	KCND2 (ENSCPBG00000008266)	ENSCPBG00000008270
Three-toed box turtle	MODERN SPECIES	28	ENSTMTG00000019101	ENSTMTG00000019088	DOCK4 (ENSTMTG00000009569)	ZNF277 (ENSTMTG00000008775)	IFRD1 (ENSTMTG00000008751)	LSMEM1 (ENSTMTG00000008738)	TMEM168 (ENSTMTG00000008718)	BMT2 (ENSTMTG00000008704)	GPR85 (ENSTMTG00000008694)	SMIM30 (ENSTMTG00000008684)	PPP1R3A (ENSTMTG00000008667)	FOXP2 (ENSTMTG00000008222)	MDFIC (ENSTMTG00000008157)	TFEC (ENSTMTG00000008131) #20	TES (ENSTMTG00000008115) #21	CAV2 (ENSTMTG00000008104) #22	CAV1 (ENSTMTG00000008094) #23	MET (ENSTMTG00000007665) #25	CAPZA2 (ENSTMTG00000007614)	ST7 (ENSTMTG00000007597)	WNT2 (ENSTMTG00000007579)	ASZ1 (ENSTMTG00000007462)	CFTR (ENSTMTG00000006673)	CTTNBP2 (ENSTMTG00000006565)	ENSTMTG00000006508	ENSTMTG00000006488	KCND2 (ENSTMTG00000006474)	TSPAN12 (ENSTMTG00000006457)	ING3 (ENSTMTG00000006434)	CPED1 (ENSTMTG00000006179)	WNT16 (ENSTMTG00000006146)
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT01000000221197	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00960000189792	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Abingdon island giant tortoise	MODERN SPECIES	2781														TFEC (ENSCABG00000000338) #20	TES (ENSCABG00000000346) #21	CAV2 (ENSCABG00000000359) #22	CAV1 (ENSCABG00000000368) #23
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005018930	DOCK4 (ENSGEVG00005019264)	ZNF277 (ENSGEVG00005019998)	IFRD1 (ENSGEVG00005020002)	LSMEM1 (ENSGEVG00005020008)	TMEM168 (ENSGEVG00005020011)	BMT2 (ENSGEVG00005020014)	GPR85 (ENSGEVG00005020020)	PPP1R3A (ENSGEVG00005020026)	ENSGEVG00005020029	FOXP2 (ENSGEVG00005020076)	MDFIC (ENSGEVG00005020132)	ENSGEVG00005020137	TFEC (ENSGEVG00005020144) #20	TES (ENSGEVG00005020153) #21	CAV2 (ENSGEVG00005020161) #22	CAV1 (ENSGEVG00005020165) #23	MET (ENSGEVG00005020173) #25	CAPZA2 (ENSGEVG00005020187)	ENSGEVG00005020193	ST7 (ENSGEVG00005020215)	WNT2 (ENSGEVG00005020248)	ASZ1 (ENSGEVG00005020255)	CFTR (ENSGEVG00005020286)	LSM8 (ENSGEVG00005020340)	ENSGEVG00005020349	KCND2 (ENSGEVG00005020370)	TSPAN12 (ENSGEVG00005020373)	ING3 (ENSGEVG00005020379)	ENSGEVG00005020382	ENSGEVG00005020385
Chinese turtle	MODERN SPECIES	1049	ZNF277 (ENSPSIG00000010933)	IFRD1 (ENSPSIG00000011837)	LSMEM1 (ENSPSIG00000012535)	TMEM168 (ENSPSIG00000012541)	BMT2 (ENSPSIG00000013149)	GPR85 (ENSPSIG00000001294)	PPP1R3A (ENSPSIG00000013327)	ENSPSIG00000001303	ENSPSIG00000001315	ENSPSIG00000001319	FOXP2 (ENSPSIG00000013338)	MDFIC (ENSPSIG00000015133)	ENSPSIG00000001329	TFEC (ENSPSIG00000015144) #20	TES (ENSPSIG00000015274) #21	CAV2 (ENSPSIG00000015283) #22	MET (ENSPSIG00000015326) #25	CAPZA2 (ENSPSIG00000016176)	ST7 (ENSPSIG00000016187)	WNT2 (ENSPSIG00000016584)	ASZ1 (ENSPSIG00000016815)	CFTR (ENSPSIG00000016860)	CTTNBP2 (ENSPSIG00000017035)	LSM8 (ENSPSIG00000017054)	ENSPSIG00000017066	ENSPSIG00000017169	ENSPSIG00000017191	ENSPSIG00000001336	KCND2 (ENSPSIG00000006329)	ENSPSIG00000001347	ENSPSIG00000006333
Lepidosauria	ANCESTRAL SPECIES	31	ENSGT00550000075044	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000166634	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Episquamata	ANCESTRAL SPECIES	3	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a
Laterata	ANCESTRAL SPECIES	6	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480	ENSGT00950000183004.a.b.a.a	ENSGT00940000155529.C	ENSGT00390000013249	ENSGT00940000159477
Common wall lizard	MODERN SPECIES	1	LRRN3 (ENSPMRG00000013240)	ENSPMRG00000013235	ENSPMRG00000013233	DOCK4 (ENSPMRG00000011255)	ZNF277 (ENSPMRG00000010889)	IFRD1 (ENSPMRG00000010887)	LSMEM1 (ENSPMRG00000010881)	TMEM168 (ENSPMRG00000010878)	BMT2 (ENSPMRG00000010873)	GPR85 (ENSPMRG00000010870)	PPP1R3A (ENSPMRG00000010867)	FOXP2 (ENSPMRG00000010845)	MDFIC (ENSPMRG00000010831)	TFEC (ENSPMRG00000010811) #20	TES (ENSPMRG00000010792) #21	CAV2 (ENSPMRG00000010787) #22	CAV1 (ENSPMRG00000010783) #23	MET (ENSPMRG00000010518) #25	CAPZA2 (ENSPMRG00000010465)	ST7 (ENSPMRG00000010415)	ASZ1 (ENSPMRG00000010379)	CFTR (ENSPMRG00000010360)	CTTNBP2 (ENSPMRG00000010336)	ENSPMRG00000010327	ENSPMRG00000010321	ENSPMRG00000010282	KCND2 (ENSPMRG00000010278)	ENSPMRG00000010273	TSPAN12 (ENSPMRG00000010270)	ING3 (ENSPMRG00000010234)	CPED1 (ENSPMRG00000010212)
Argentine black and white tegu	MODERN SPECIES	15	DOCK4 (ENSSMRG00000012716)	ZNF277 (ENSSMRG00000012714)	IFRD1 (ENSSMRG00000012713)	ENSSMRG00000012711	TMEM168 (ENSSMRG00000012707)	BMT2 (ENSSMRG00000012706)	ENSSMRG00000012705	ENSSMRG00000012701	PPP1R3A (ENSSMRG00000012682)	ENSSMRG00000012670	ENSSMRG00000012664	FOXP2 (ENSSMRG00000012648)	MDFIC (ENSSMRG00000012630)	TFEC (ENSSMRG00000012616) #20	TES (ENSSMRG00000012594) #21	CAV2 (ENSSMRG00000012573) #22	CAV1 (ENSSMRG00000012572) #23	MET (ENSSMRG00000012570) #25	CAPZA2 (ENSSMRG00000012563)	ST7 (ENSSMRG00000012559)	ASZ1 (ENSSMRG00000012548)	CFTR (ENSSMRG00000012377)	CTTNBP2 (ENSSMRG00000012375)	ENSSMRG00000012339	KCND2 (ENSSMRG00000012315)	TSPAN12 (ENSSMRG00000012286)	ING3 (ENSSMRG00000012275)	CPED1 (ENSSMRG00000012271)	WNT16 (ENSSMRG00000012269)	FAM3C (ENSSMRG00000012268)	PTPRZ1 (ENSSMRG00000012253)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00940000160513	ENSGT00940000164174	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT00390000010292	ENSGT01090000263438	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00880000138051.a	ENSGT01030000238252	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216.a	ENSGT00390000015216.b
Elapidae	ANCESTRAL SPECIES	6	ENSGT00550000075044	ENSGT00940000160513	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT01090000263438	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT01010000230279	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000153661	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216.a	ENSGT01000000221730	ENSGT00390000015216.b	ENSGT00940000157480
Indian cobra	MODERN SPECIES	10	ENSNNAG00000012715	ZNF277 (ENSNNAG00000012680)	DOCK4 (ENSNNAG00000011030)	LRRN3 (ENSNNAG00000010931)	IMMP2L (ENSNNAG00000010871)	PNPLA8 (ENSNNAG00000010815)	NRCAM (ENSNNAG00000009176)	ENSNNAG00000009071	PPP1R3A (ENSNNAG00000009044)	FOXP2 (ENSNNAG00000008175)	MDFIC (ENSNNAG00000008115)	ENSNNAG00000008092	TFEC (ENSNNAG00000008043) #20	ENSNNAG00000008019	TES (ENSNNAG00000007976) #21	CAV2 (ENSNNAG00000007961) #22	CAV1 (ENSNNAG00000007947) #23	ENSNNAG00000007381 #25	ENSNNAG00000007335 #25	ENSNNAG00000007327 #25	CAPZA2 (ENSNNAG00000007317)	ST7 (ENSNNAG00000006862)	ASZ1 (ENSNNAG00000006732)	CFTR (ENSNNAG00000006666)	CTTNBP2 (ENSNNAG00000006600)	LSM8 (ENSNNAG00000006583)	ENSNNAG00000006556	ENSNNAG00000006538	KCND2 (ENSNNAG00000006526)	TSPAN12 (ENSNNAG00000006500)	ING3 (ENSNNAG00000006488)
Elapidae_a	ANCESTRAL SPECIES	61	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT01090000263438	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT01010000230279	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b.a	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216.a	ENSGT01000000221730	ENSGT00390000015216.b	ENSGT00940000157480
Acanthophiinae	ANCESTRAL SPECIES	57	ENSGT00940000160513	ENSGT00550000075044	ENSGT00940000155659	ENSGT00390000010852	ENSGT00390000013347.a	ENSGT01090000263438	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT01010000230279	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b.a	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00940000153661	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216.a	ENSGT01000000221730
Mainland tiger snake	MODERN SPECIES	26	LRRN3 (ENSNSUG00000013353)	IMMP2L (ENSNSUG00000013352)	DOCK4 (ENSNSUG00000013292)	ZNF277 (ENSNSUG00000013176)	IFRD1 (ENSNSUG00000013175)	ENSNSUG00000013174	TMEM168 (ENSNSUG00000013173)	BMT2 (ENSNSUG00000013172)	GPR85 (ENSNSUG00000013171)	ENSNSUG00000013170	FOXP2 (ENSNSUG00000013169)	MDFIC (ENSNSUG00000013168)	TFEC (ENSNSUG00000013167) #20	ENSNSUG00000013166	TES (ENSNSUG00000013165) #21	CAV2 (ENSNSUG00000013164) #22	CAV1 (ENSNSUG00000013163) #23	MET (ENSNSUG00000012872) #25	CAPZA2 (ENSNSUG00000012669)	ST7 (ENSNSUG00000012058)	ENSNSUG00000012057	CFTR (ENSNSUG00000012053)	CTTNBP2 (ENSNSUG00000012041)	LSM8 (ENSNSUG00000012040)	ENSNSUG00000012038	ENSNSUG00000012035	ENSNSUG00000012034	KCND2 (ENSNSUG00000012032)	TSPAN12 (ENSNSUG00000012031)	ING3 (ENSNSUG00000012030)	ENSNSUG00000012029
Blue-lipped sea krait	MODERN SPECIES	5937																CAV2 (ENSLLTG00000010096) #22	RHOQ (ENSLLTG00000010090)	PIGF (ENSLLTG00000010077)
Lizard	MODERN SPECIES	4	ENSACAG00000042466	TMEM168 (ENSACAG00000007031)	BMT2 (ENSACAG00000007011)	ENSACAG00000044183	GPR85 (ENSACAG00000007005)	ENSACAG00000038410	PPP1R3A (ENSACAG00000007002)	ENSACAG00000041894	FOXP2 (ENSACAG00000006713)	MDFIC (ENSACAG00000006712)	ENSACAG00000044299	TFEC (ENSACAG00000036278) #20	ENSACAG00000009975	ENSACAG00000035611	TES (ENSACAG00000006611) #21	CAV2 (ENSACAG00000043538) #22	CAV1 (ENSACAG00000006576) #23	MET (ENSACAG00000008309) #25	CAPZA2 (ENSACAG00000008196)	ST7 (ENSACAG00000008154)	ASZ1 (ENSACAG00000008056)	CFTR (ENSACAG00000007652)	ENSACAG00000039700	ENSACAG00000037242	ENSACAG00000035958	ENSACAG00000037108	ENSACAG00000040576	ENSACAG00000007252	ENSACAG00000039034	ENSACAG00000037922	ENSACAG00000007246
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1016													TFEC (ENSSPUG00000017062) #20	TES (ENSSPUG00000017069) #21	ENSSPUG00000017076 #22	ENSSPUG00000017079 #22	CAV1 (ENSSPUG00000017094) #23	MET (ENSSPUG00000017105) #25	ENSSPUG00000017153	ST7 (ENSSPUG00000017257)	WNT2 (ENSSPUG00000017330)	ASZ1 (ENSSPUG00000017359)	CFTR (ENSSPUG00000017373)	CTTNBP2 (ENSSPUG00000017397)	LSM8 (ENSSPUG00000017419)	ENSSPUG00000017445	DPH7 (ENSSPUG00000017505)	PNPLA7 (ENSSPUG00000017551)
tuatara	MODERN SPECIES	1016														TFEC (ENSSPUG00000017062) #20	TES (ENSSPUG00000017069) #21	ENSSPUG00000017076 #22	ENSSPUG00000017079 #22	CAV1 (ENSSPUG00000017094) #23	MET (ENSSPUG00000017105) #25	ENSSPUG00000017153	ST7 (ENSSPUG00000017257)	WNT2 (ENSSPUG00000017330)	ASZ1 (ENSSPUG00000017359)	CFTR (ENSSPUG00000017373)	CTTNBP2 (ENSSPUG00000017397)	LSM8 (ENSSPUG00000017419)	ENSSPUG00000017445	DPH7 (ENSSPUG00000017505)	PNPLA7 (ENSSPUG00000017551)
Anura	ANCESTRAL SPECIES	24	ENSGT00940000160513	ENSGT01020000230359.B	ENSGT00940000155659	ENSGT00390000010852	ENSGT00940000167703	ENSGT00390000013347.a	ENSGT00390000005941	ENSGT00390000010382	ENSGT00890000139436.B	ENSGT01040000241896	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685	ENSGT00940000159404 #20	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.b.a #23	ENSGT00940000158022 #25	ENSGT00950000183119.a.e.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Frog	MODERN SPECIES	3	dock4 (ENSXETG00000009251)	znf277 (ENSXETG00000009253)	ENSXETG00000040500	ifrd1 (ENSXETG00000009255)	tmem168 (ENSXETG00000009256)	bmt2 (ENSXETG00000037231)	gpr85 (ENSXETG00000009258)	ENSXETG00000038337	ppp1r3a (ENSXETG00000036869)	ENSXETG00000041105	foxp2 (ENSXETG00000011560)	mdfic (ENSXETG00000011565)	tfec (ENSXETG00000011566) #20	tes (ENSXETG00000011568) #21	ENSXETG00000042149	cav2 (ENSXETG00000040190) #22	cav1 (ENSXETG00000011572) #23	met (ENSXETG00000021752) #25	capza2 (ENSXETG00000021760)	ENSXETG00000045498	st7 (ENSXETG00000021764)	ENSXETG00000035452	wnt2 (ENSXETG00000031217)	asz1 (ENSXETG00000021791)	cftr (ENSXETG00000021796)	cttnbp2 (ENSXETG00000021813)	lsm8 (ENSXETG00000021829)	ENSXETG00000021831	ENSXETG00000045849	ENSXETG00000047565	kcnd2 (ENSXETG00000033363)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000006329	ENSLLEG00000006345	ENSLLEG00000006355	FOXP2 (ENSLLEG00000006420)	ENSLLEG00000006790	MDFIC (ENSLLEG00000006851)	ENSLLEG00000006886	ENSLLEG00000006900	ENSLLEG00000006912	TFEC (ENSLLEG00000006933) #20	ENSLLEG00000007017	TES (ENSLLEG00000007038) #21	ENSLLEG00000007175	ENSLLEG00000007200	ENSLLEG00000007214	CAV2 (ENSLLEG00000007273) #22	CAV1 (ENSLLEG00000007292) #23	ENSLLEG00000007314	MET (ENSLLEG00000007329) #25	CAPZA2 (ENSLLEG00000007430)	ST7 (ENSLLEG00000007521)	ASZ1 (ENSLLEG00000008226)	CFTR (ENSLLEG00000008811)	CTTNBP2 (ENSLLEG00000009120)	LSM8 (ENSLLEG00000009457)	ENSLLEG00000009520	ENSLLEG00000009794	KCND2 (ENSLLEG00000009861)	TSPAN12 (ENSLLEG00000009903)	ING3 (ENSLLEG00000010107)	CPED1 (ENSLLEG00000010420)
Coelacanth	MODERN SPECIES	548														TFEC (ENSLACG00000008018) #20	TES (ENSLACG00000010923) #21	CAV2 (ENSLACG00000012398) #22	CAV1 (ENSLACG00000012477) #23	MET (ENSLACG00000013435) #25	ENSLACG00000014407	ENSLACG00000014509	ENSLACG00000014772	ST7 (ENSLACG00000015144)	WNT2 (ENSLACG00000015855)	ASZ1 (ENSLACG00000016093)
Actinopterygii	ANCESTRAL SPECIES	1	ENSGT00390000001702	ENSGT00730000111314	ENSGT01050000244850.B	ENSGT00390000000903.a	ENSGT00390000001439	ENSGT00940000157992	ENSGT00390000002915	ENSGT00940000153769.E	ENSGT00940000160568	ENSGT00390000016313.a.a	ENSGT00510000047602	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000158082.a.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00390000013208	ENSGT00390000003224.B	ENSGT00940000160243	ENSGT00940000165748	ENSGT00940000159926
Neopterygii	ANCESTRAL SPECIES	20	ENSGT00390000001702	ENSGT00730000111314	ENSGT01050000244850.B	ENSGT00390000000903.a	ENSGT00390000001439	ENSGT00940000157992	ENSGT00390000002915	ENSGT00940000153769.E	ENSGT00940000160568	ENSGT00390000016313.a.a	ENSGT00510000047602	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000158082.a.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00390000013208	ENSGT00390000003224.B	ENSGT00940000160974.a	ENSGT00940000160243	ENSGT00940000165748
Osteoglossocephalai	ANCESTRAL SPECIES	55	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000158082.a.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00730000111212	ENSGT00940000163982	ENSGT00390000013208	ENSGT00390000003224.B	ENSGT00940000160974.a	ENSGT00940000160243	ENSGT00940000165748
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	360						ENSGT00940000157277.n	ENSGT00940000158251.b	ENSGT00950000182839.A.c.b	ENSGT00940000157538.f	ENSGT00390000018272.l	ENSGT00940000158342.b	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000158082.a.a	ENSGT00940000155993.k #21	ENSGT00950000183006.A.b.g #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022.i #25
Asian bonytongue	MODERN SPECIES	13	ENSSFOG00015005085	ENSSFOG00015032965	atp6v1e1a (ENSSFOG00015005023)	bcl2l13 (ENSSFOG00015005008)	SLC6A15 (ENSSFOG00015004972)	ALX1 (ENSSFOG00015029507)	RASSF9 (ENSSFOG00015004945)	MGAT4C (ENSSFOG00015004917)	TMTC3 (ENSSFOG00015004876)	ENSSFOG00015032341	dusp6 (ENSSFOG00015004851)	cep41 (ENSSFOG00015004844)	cpa1 (ENSSFOG00015004832)	ENSSFOG00015004801	tes (ENSSFOG00015004788) #21	cav2 (ENSSFOG00015004776) #22	cav1 (ENSSFOG00015026979) ##22	met (ENSSFOG00015004721) #25	ENSSFOG00015004665	ST7 (ENSSFOG00015004605)	wnt2 (ENSSFOG00015004572)	CTTNBP2 (ENSSFOG00015004449)	LSM8 (ENSSFOG00015027761)	calua (ENSSFOG00015004362)	tnpo3 (ENSSFOG00015004256)	IRF5 (ENSSFOG00015004188)	KCP (ENSSFOG00015003960)	atp6v1f (ENSSFOG00015003935)	ENSSFOG00015003902	ENSSFOG00015003882	IMPDH1 (ENSSFOG00015003842)
P. kingsleyae	MODERN SPECIES	542														cpa1 (ENSPKIG00000008301)	cep41 (ENSPKIG00000008347)	cav2 (ENSPKIG00000008391) #22	cav1 (ENSPKIG00000008402) ##22	met (ENSPKIG00000008429) #25	ENSPKIG00000008482	wnt2 (ENSPKIG00000008515)	ENSPKIG00000008529	atp6v1f (ENSPKIG00000008542)	ENSPKIG00000008551	ENSPKIG00000008566	ENSPKIG00000008589	tnpo3 (ENSPKIG00000008628)	calua (ENSPKIG00000008685)	IMPDH1 (ENSPKIG00000008731)	ENSPKIG00000008816	ENSPKIG00000008838
Osteoglossiformes	ANCESTRAL SPECIES	376														ENSGT00940000160413	ENSGT00940000155993.l #21	ENSGT00950000183006.A.b.h #22	ENSGT00940000158022.j #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00940000158293.p	ENSGT00730000111212	ENSGT00940000163982	ENSGT00390000013208	ENSGT00940000160243	ENSGT00940000159926.p
P. kingsleyae	MODERN SPECIES	91													dusp6 (ENSPKIG00000025556)	ENSPKIG00000025555	tes (ENSPKIG00000025554) #21	cav2 (ENSPKIG00000025553) #22	cav1 (ENSPKIG00000025552) ##22	met (ENSPKIG00000025550) #25	ENSPKIG00000025549	ENSPKIG00000025547	ENSPKIG00000025546	st7 (ENSPKIG00000025544)	asz1 (ENSPKIG00000025541)	cftr (ENSPKIG00000025539)	ENSPKIG00000025537	ENSPKIG00000025535	gdi2 (ENSPKIG00000025532)	ankrd16 (ENSPKIG00000025531)	fbxo18 (ENSPKIG00000025529)	ENSPKIG00000025528	ENSPKIG00000025527
Clupeocephala	ANCESTRAL SPECIES	205	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972	ENSGT00940000157033.h	ENSGT00940000156088.c.b	ENSGT00390000001116	ENSGT00940000177974
Otomorpha	ANCESTRAL SPECIES	168	ENSGT00390000002730.e.a	ENSGT00940000160121	ENSGT00940000157633	ENSGT00390000015016	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25
Otophysi	ANCESTRAL SPECIES	19	ENSGT01100000264346	ENSGT00390000007975.a.b.b	ENSGT00940000157523.g.b	ENSGT00390000015016	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022.l.a #25	ENSGT00390000016680	ENSGT00940000160224	ENSGT00940000165477	ENSGT00390000016897.d	ENSGT01100000263502.A.b.b	ENSGT00940000158637	ENSGT00390000007685	ENSGT00390000000987.n	ENSGT00390000000987.m	ENSGT00940000155662.e.b	ENSGT00940000180066	ENSGT00940000176351	ENSGT00390000011355.a
Characiphysae	ANCESTRAL SPECIES	44	ENSGT00940000157523.g.b	ENSGT00390000015016	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000166588	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.r.a.b	ENSGT00940000158082.b.r.b	ENSGT00940000158082.b.r.a.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022.l.a #25	ENSGT00390000016680	ENSGT00940000165477	ENSGT00390000016897.d	ENSGT01100000263502.A.b.b.e	ENSGT00940000158637	ENSGT00390000007685	ENSGT00390000000987.n	ENSGT00390000000987.m	ENSGT00940000155662.e.b	ENSGT00940000180066	ENSGT00940000176351	ENSGT00390000011355.a	ENSGT00940000155997.lb.b
Characiphysae_b	ANCESTRAL SPECIES	62	ENSGT00390000007975.a.b.b	ENSGT00940000157523.g.b	ENSGT00390000015016	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.q	ENSGT00940000158082.b.r.b	ENSGT00940000158082.b.r.a.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22
Characoidei	ANCESTRAL SPECIES	191	ENSGT00390000007975.a.b.b	ENSGT00940000157523.g.b	ENSGT00390000015016	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000166588	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.r.a.b	ENSGT00940000158082.b.r.b	ENSGT00940000158082.b.r.a.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22
Red-bellied piranha	MODERN SPECIES	305	borcs5 (ENSPNAG00000004184)	zgc:103499 (ENSPNAG00000006372)	cep290 (ENSPNAG00000027091)	ENSPNAG00000004087	kitlga (ENSPNAG00000026606)	ENSPNAG00000026589	dusp6 (ENSPNAG00000026583)	POC1B (ENSPNAG00000026557)	cep41 (ENSPNAG00000026546)	CPA1 (ENSPNAG00000006008)	CPA1 (ENSPNAG00000026515)	CPA1 (ENSPNAG00000026452)	CPA1 (ENSPNAG00000026424)	CPA1 (ENSPNAG00000026413)	tes (ENSPNAG00000026400) #21	cav2 (ENSPNAG00000004040) #22	cav1 (ENSPNAG00000026365) ##22	ENSPNAG00000026347	ENSPNAG00000026322	ENSPNAG00000004035	ENSPNAG00000026238	ENSPNAG00000026217	ENSPNAG00000026025
Mexicana tetra	MODERN SPECIES	16	TSC22D3 (ENSAMXG00000019451)	ENSAMXG00000043481	ENSAMXG00000029344	ENSAMXG00000044053	PCDH11Y (ENSAMXG00000011146)	ENSAMXG00000041593	ENSAMXG00000011667	dusp6 (ENSAMXG00000043968)	POC1B (ENSAMXG00000011656)	ENSAMXG00000034962	cep41 (ENSAMXG00000037744)	CPA1 (ENSAMXG00000034684)	CPA1 (ENSAMXG00000011639)	CPA1 (ENSAMXG00000011629)	tes (ENSAMXG00000011622) #21	cav2 (ENSAMXG00000036358) #22	cav1 (ENSAMXG00000030802) ##22	mxd3 (ENSAMXG00000039618)	rnf103 (ENSAMXG00000036300)	immt (ENSAMXG00000011592)	ENSAMXG00000040680	ptcd3 (ENSAMXG00000011570)	ENSAMXG00000011559	ENSAMXG00000011553	prpf19 (ENSAMXG00000011547)	tcirg1b (ENSAMXG00000011532)	mrnip (ENSAMXG00000035662)	sqstm1 (ENSAMXG00000011526)	mgat4b (ENSAMXG00000031451)	ENSAMXG00000042248	ENSAMXG00000030588
Electric eel	MODERN SPECIES	414		ccnd2a (ENSEEEG00000007568)	tigara (ENSEEEG00000007571)	fgf6a (ENSEEEG00000007580)	zgc:77158 (ENSEEEG00000007585)	zgc:154077 (ENSEEEG00000007586)	DYRK4 (ENSEEEG00000007588)	ndufa9a (ENSEEEG00000007590)	GALNT8 (ENSEEEG00000007598)	dusp6 (ENSEEEG00000007660)	ENSEEEG00000007664	cep41 (ENSEEEG00000007676)	ENSEEEG00000007678	cpa1 (ENSEEEG00000007704)	tes (ENSEEEG00000007809) #21	cav2 (ENSEEEG00000007810) #22	cav1 (ENSEEEG00000007811) ##22	ENSEEEG00000007814
Channel catfish	MODERN SPECIES	27	bmal1a (ENSIPUG00000013011)	borcs5 (ENSIPUG00000013168)	c8h12orf29 (ENSIPUG00000013206)	ENSIPUG00000013245	ENSIPUG00000013281	TMTC3 (ENSIPUG00000013316)	KITLG (ENSIPUG00000013385)	ENSIPUG00000013475	ENSIPUG00000013500	dusp6 (ENSIPUG00000013507)	POC1B (ENSIPUG00000013524)	cep41 (ENSIPUG00000013607)	CPA1 (ENSIPUG00000013685)	cbpa1 (ENSIPUG00000013706)	tes (ENSIPUG00000013766) #21	cav2 (ENSIPUG00000013796) #22	cav1 (ENSIPUG00000013804) ##22	met (ENSIPUG00000013833) #25	ENSIPUG00000013918	ENSIPUG00000013941	ENSIPUG00000013928	ENSIPUG00000013949	ENSIPUG00000013959	SMPD3 (ENSIPUG00000013967)	ENSIPUG00000013990	ENSIPUG00000014005	ENSIPUG00000014016	ENSIPUG00000014026	ENSIPUG00000014033	ENSIPUG00000014043	septin15 (ENSIPUG00000014056)
Cyprinoidei	ANCESTRAL SPECIES	75	ENSGT00390000015889.t	ENSGT01100000264346	ENSGT00390000007975.a.b.b	ENSGT00940000157523.g.b	ENSGT00390000015016	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.o.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022.l.a #25	ENSGT00390000016680	ENSGT00940000160224	ENSGT00940000165477	ENSGT00390000016897.d	ENSGT01100000263502.A.b.b	ENSGT00940000158637	ENSGT00390000007685	ENSGT00390000000987.n	ENSGT00390000000987.m	ENSGT00940000155662.e.b	ENSGT00940000180066	ENSGT00940000176351	ENSGT00390000011355.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	108	ENSGT00390000007975.a.b.b.b	ENSGT00940000157523.g.b.e.a	ENSGT00390000015016.a	ENSGT00500000044938.p	ENSGT00730000111039.C	ENSGT00940000157538.f.a.b	ENSGT00940000166588	ENSGT00940000157538.f.b	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b.f	ENSGT00940000167617.b	ENSGT00390000002222.q	ENSGT00940000158082.b.p	ENSGT00940000155993.f #21	ENSGT00950000183006.A.b.i #22	ENSGT00950000183006.B.f.a.j ##22	ENSGT00940000158022.l.a.a #25	ENSGT00390000016680	ENSGT00940000160224	ENSGT00940000165477.b	ENSGT00390000016897.d.b	ENSGT00940000165477.a	ENSGT00390000016897.d.a	ENSGT01100000263502.A.b.b.c	ENSGT00940000158637.c	ENSGT00390000000987.n.a	ENSGT00390000000987.m.d	ENSGT00390000011355.a.a	ENSGT00940000157572.a.b.b	ENSGT00940000155997.lb.b.y
Cyprininae_a	ANCESTRAL SPECIES	46	ENSGT00610000087446	ENSGT00390000018603.c	ENSGT00390000007975.a.b.b.b	ENSGT00940000157523.g.b.e.a	ENSGT00390000015016.a	ENSGT00500000044938.p	ENSGT00730000111039.C	ENSGT00940000166588	ENSGT00390000018272.i.d	ENSGT00950000182953.B.b	ENSGT00940000158342.b.f	ENSGT00940000167617.a.b	ENSGT00390000002222.q	ENSGT00940000158082.b.p	ENSGT00940000155993.f #21	ENSGT00950000183006.A.b.i #22	ENSGT00950000183006.B.f.a.j ##22	ENSGT00940000158022.l.a.a #25	ENSGT00390000016680	ENSGT00940000160224	ENSGT00940000165477.b	ENSGT00390000016897.d.b	ENSGT00940000165477.a	ENSGT00390000016897.d.a	ENSGT01100000263502.A.b.b.c	ENSGT00940000158637.c	ENSGT00390000000987.n.a	ENSGT00390000000987.m.d	ENSGT00390000011355.a.a	ENSGT00940000157572.a.b.b	ENSGT00940000155997.lb.b.y
Golden-line barbel	MODERN SPECIES	30	galnt18a (ENSSGRG00000050863)	ENSSGRG00000050861	PIGY (ENSSGRG00000050860)	pth1a (ENSSGRG00000050858)	btbd10a (ENSSGRG00000050851)	BMAL1 (ENSSGRG00000050810)	zgc:103499 (ENSSGRG00000050801)	ENSSGRG00000050797	ENSSGRG00000050710	kitlga (ENSSGRG00000050708)	ENSSGRG00000050707	dusp6 (ENSSGRG00000050706)	poc1b (ENSSGRG00000050705)	cep41 (ENSSGRG00000050704)	ENSSGRG00000050703 #21	cav2 (ENSSGRG00000050702) #22	cav1 (ENSSGRG00000050701) ##22	met (ENSSGRG00000050236) #25	ENSSGRG00000050227	ENSSGRG00000050226	ENSSGRG00000050224	ENSSGRG00000050222	ENSSGRG00000050220	ENSSGRG00000050219	tdg.1 (ENSSGRG00000050218)	ENSSGRG00000050217	ENSSGRG00000050216	ENSSGRG00000050213	ENSSGRG00000050212	rlbp1b (ENSSGRG00000050207)	mfge8b (ENSSGRG00000050185)
Common carp reference	MODERN SPECIES	33	zgc:162634 (ENSCCRG00000036445)	ENSCCRG00000053061	btbd10a (ENSCCRG00000062455)	bmal1a (ENSCCRG00000038879)	borcs5 (ENSCCRG00000039763)	zgc:103499 (ENSCCRG00000038860)	ENSCCRG00000025040	cep290 (ENSCCRG00000050699)	kitlga (ENSCCRG00000036424)	ENSCCRG00000036418	dusp6 (ENSCCRG00000064518)	poc1b (ENSCCRG00000076625)	cep41 (ENSCCRG00000046652)	ENSCCRG00000073793	tes (ENSCCRG00000060584) #21	cav2 (ENSCCRG00000060621) #22	cav1 (ENSCCRG00000069794) ##22	met (ENSCCRG00000051098) #25	ENSCCRG00000051046	ENSCCRG00000054988	ENSCCRG00000018294	parietopsin (ENSCCRG00000011274)	ENSCCRG00000008712	ENSCCRG00000008622	tdg.1 (ENSCCRG00000008613)	samm50 (ENSCCRG00000050786)	ENSCCRG00000008585	ENSCCRG00000063749	ENSCCRG00000061886	rlbp1b (ENSCCRG00000011350)	abhd2b (ENSCCRG00000011317)
Goldfish	MODERN SPECIES	45	vac14 (ENSCARG00000069823)	galnt18a (ENSCARG00000069901)	zgc:162634 (ENSCARG00000069907)	btbd10a (ENSCARG00000069909)	bmal1a (ENSCARG00000069955)	borcs5 (ENSCARG00000070027)	zgc:103499 (ENSCARG00000070035)	cep290 (ENSCARG00000070057)	TMTC3 (ENSCARG00000070095)	ENSCARG00000070111	dusp6 (ENSCARG00000070124)	poc1b (ENSCARG00000070125)	cep41 (ENSCARG00000070126)	CPA1 (ENSCARG00000070128)	tes (ENSCARG00000070134) #21	cav2 (ENSCARG00000070136) #22	cav1 (ENSCARG00000070137) ##22	met (ENSCARG00000070150) #25	ENSCARG00000070179	ENSCARG00000070180	ENSCARG00000070181	ENSCARG00000070182	ENSCARG00000070185	parietopsin (ENSCARG00000070187)	ENSCARG00000070189	ENSCARG00000070201	tdg.1 (ENSCARG00000070207)	samm50 (ENSCARG00000070212)	CACNA2D4 (ENSCARG00000070254)	LRTM2 (ENSCARG00000070299)	ENSCARG00000070301
Cyprininae	ANCESTRAL SPECIES	974														ENSGT00940000158082.b.o.b	ENSGT00940000155993.e #21	ENSGT00950000183006.A.b.j #22	ENSGT00950000183006.B.f.a.i ##22	ENSGT00940000158022.l.a.b #25
Goldfish	MODERN SPECIES	17	zpd (ENSCARG00000004154)	MMP15 (ENSCARG00000004169)	ENSCARG00000004300	ENSCARG00000005327	ELMO3 (ENSCARG00000005496)	e2f4 (ENSCARG00000008555)	e2f4 (ENSCARG00000008569)	ENSCARG00000008609	setd6 (ENSCARG00000008807)	cnot1 (ENSCARG00000008876)	kdm7ab (ENSCARG00000009026)	poc1b (ENSCARG00000009095)	cep41 (ENSCARG00000009673)	cpa1 (ENSCARG00000009717)	tes (ENSCARG00000010012) #21	cav2 (ENSCARG00000010029) #22	cav1 (ENSCARG00000010039) ##22	ENSCARG00000010053	ENSCARG00000010062	LRTM2 (ENSCARG00000010075)	samm50 (ENSCARG00000010088)	ENSCARG00000010127	ENSCARG00000010150	ENSCARG00000010162	ENSCARG00000010189	met (ENSCARG00000010298) #25	cav1 (ENSCARG00000011698) ##22	ENSCARG00000011732	tdg.1 (ENSCARG00000011739)	ENSCARG00000011752	NT5DC3 (ENSCARG00000011785)
Cyprininae_a	ANCESTRAL SPECIES	664												ENSGT00940000167617.b	ENSGT00390000002222.r	ENSGT00940000158082.b.o.b	ENSGT00940000155993.e #21	ENSGT00950000183006.A.b.j #22	ENSGT00950000183006.B.f.a.i ##22	ENSGT00940000158022.l.a.b #25
Common carp reference	MODERN SPECIES	37	vac14 (ENSCCRG00000024701)	galnt18a (ENSCCRG00000018850)	ENSCCRG00000053903	pth1a (ENSCCRG00000070549)	btbd10a (ENSCCRG00000074745)	bmal1a (ENSCCRG00000036467)	borcs5 (ENSCCRG00000038864)	zgc:103499 (ENSCCRG00000076025)	TMTC3 (ENSCCRG00000032596)	kitlga (ENSCCRG00000036401)	dusp6 (ENSCCRG00000061132)	poc1b (ENSCCRG00000072391)	cep41 (ENSCCRG00000056040)	cpa1 (ENSCCRG00000046612)	tes (ENSCCRG00000046585) #21	cav2 (ENSCCRG00000051030) #22	cav1 (ENSCCRG00000074353) ##22	met (ENSCCRG00000050913) #25	ENSCCRG00000059438	ENSCCRG00000050818	ENSCCRG00000050810	parietopsin (ENSCCRG00000050805)	NT5DC3 (ENSCCRG00000050803)	uqcc6 (ENSCCRG00000050802)	TDG (ENSCCRG00000050800)	tdg.1 (ENSCCRG00000050797)	ENSCCRG00000050795	ENSCCRG00000050792	samm50 (ENSCCRG00000008590)	ENSCCRG00000030965	ENSCCRG00000011805
Golden-line barbel	MODERN SPECIES	2036																cav2 (ENSSGRG00000008274) #22	cav1 (ENSSGRG00000008277) ##22	ENSSGRG00000008280
Zebrafish	MODERN SPECIES	17	pth1a (ENSDARG00000093738)	btbd10a (ENSDARG00000062674)	bmal1a (ENSDARG00000006791)	borcs5 (ENSDARG00000077830)	C25H12orf29 (ENSDARG00000045785)	cep290 (ENSDARG00000062727)	TMTC3 (ENSDARG00000062846)	kitlga (ENSDARG00000070917)	ENSDARG00000045792	dusp6 (ENSDARG00000070914)	poc1b (ENSDARG00000021110)	cep41 (ENSDARG00000038500)	cpa1 (ENSDARG00000030915)	cpa5 (ENSDARG00000021339)	tes (ENSDARG00000051857) #21	cav2 (ENSDARG00000052000) #22	cav1 (ENSDARG00000103747) ##22	met (ENSDARG00000070903) #25	ENSDARG00000019142	ENSDARG00000052064	ENSDARG00000096975	ENSDARG00000076191	ENSDARG00000062960	ENSDARG00000015732	ENSDARG00000101725	parietopsin (ENSDARG00000052056)	NT5DC3 (ENSDARG00000062949)	uqcc6 (ENSDARG00000045797)	TDG (ENSDARG00000086450)	tdg.1 (ENSDARG00000013004)	samm50 (ENSDARG00000045814)
Clupeiformes	ANCESTRAL SPECIES	214	ENSGT00940000160690	ENSGT00940000156027.b	ENSGT00940000157569	ENSGT00940000166500	ENSGT00550000074921	ENSGT00940000153541.D	ENSGT00390000007084	ENSGT00940000157262.m.a	ENSGT00940000157494	ENSGT00940000156030.j	ENSGT00940000166256	ENSGT00940000166455	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25
Denticle herring	MODERN SPECIES	8	ENSDCDG00000033918	atp6v1e1a (ENSDCDG00000033922)	cpa2 (ENSDCDG00000033929)	ENSDCDG00000033964	borcs5 (ENSDCDG00000034042)	zgc:103499 (ENSDCDG00000034045)	cep290 (ENSDCDG00000034048)	TMTC3 (ENSDCDG00000034059)	kitlga (ENSDCDG00000034160)	ENSDCDG00000034176	dusp6 (ENSDCDG00000034211)	POC1A (ENSDCDG00000034218)	cep41 (ENSDCDG00000034232)	cpa1 (ENSDCDG00000034241)	tes (ENSDCDG00000034286) #21	cav2 (ENSDCDG00000034289) #22	cav1 (ENSDCDG00000034294) ##22	met (ENSDCDG00000034314) #25	snupn (ENSDCDG00000034466)	PTPN9 (ENSDCDG00000034468)	sin3aa (ENSDCDG00000034515)	crabp1a (ENSDCDG00000034665)	skic8 (ENSDCDG00000034674)	slc25a44a (ENSDCDG00000034705)	IREB2 (ENSDCDG00000034745)	psma4 (ENSDCDG00000035114)	OAZ2 (ENSDCDG00000005669)	RBPMS2 (ENSDCDG00000005681)	AP3B2 (ENSDCDG00000005988)	cpeb1a (ENSDCDG00000007047)	ENSDCDG00000007141
Euteleosteomorpha	ANCESTRAL SPECIES	119	ENSGT00640000091574	ENSGT00940000155352	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972	ENSGT00940000157033.h	ENSGT00940000156088.c.b	ENSGT00940000168658	ENSGT00390000011055
Acanthomorphata	ANCESTRAL SPECIES	41	ENSGT00940000177577	ENSGT00940000155352.gb.a.a	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a	ENSGT00390000000972	ENSGT00940000157033.h	ENSGT00940000156088.c.b	ENSGT00940000154910.b.a	ENSGT00530000063472.b.b.a.b.a.b	ENSGT00940000155960.a
Euacanthomorphacea	ANCESTRAL SPECIES	39	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00390000000972	ENSGT00940000157033.h	ENSGT00940000156088.c.b	ENSGT00940000160214
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00940000154856.A.a.c.a.b.a.a.a
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000174622
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000161051.a.a.b.b.b.b.f	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000174622	ENSGT00940000154527.a.a.b.b
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000161051.a.a.b.b.b.b.f	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Zig-zag eel	MODERN SPECIES	20	NTS (ENSMAMG00000022921)	MGAT4C (ENSMAMG00000022919)	eif4g2b (ENSMAMG00000022916)	ENSMAMG00000022912	C12orf29 (ENSMAMG00000024648)	cep290 (ENSMAMG00000022909)	TMTC3 (ENSMAMG00000022906)	kitlga (ENSMAMG00000022905)	ENSMAMG00000022903	dusp6 (ENSMAMG00000022902)	poc1b (ENSMAMG00000022900)	cep41 (ENSMAMG00000022899)	cpa1 (ENSMAMG00000022896)	tes (ENSMAMG00000022894) #21	ENSMAMG00000022893	cav2 (ENSMAMG00000022891) #22	cav1 (ENSMAMG00000026049) ##22	met (ENSMAMG00000022887) #25	ENSMAMG00000022885	ST7 (ENSMAMG00000022884)	wnt2 (ENSMAMG00000022879)	asz1 (ENSMAMG00000022877)	cftr (ENSMAMG00000022871)	ENSMAMG00000022869	ENSMAMG00000022868	ENSMAMG00000022866	ENSMAMG00000022865	ENSMAMG00000022864	ENSMAMG00000025538	ENSMAMG00000022860	ENSMAMG00000022858
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000161051.a.a.b.b.b.b.f	ENSGT00940000154189.B	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c	ENSGT00390000017767.a.b
Climbing perch	MODERN SPECIES	19	NTS (ENSATEG00000002370)	MGAT4C (ENSATEG00000002400)	eif4g2b (ENSATEG00000002419)	ENSATEG00000025828	zgc:103499 (ENSATEG00000002507)	cep290 (ENSATEG00000002617)	TMTC3 (ENSATEG00000002784)	kitlga (ENSATEG00000002854)	ENSATEG00000002898	dusp6 (ENSATEG00000003127)	poc1b (ENSATEG00000003143)	cep41 (ENSATEG00000003152)	ENSATEG00000003170	ENSATEG00000003625	tes (ENSATEG00000003674) #21	cav2 (ENSATEG00000003717) #22	cav1 (ENSATEG00000003728) ##22	ENSATEG00000003746 ##22	met (ENSATEG00000003752) #25	ENSATEG00000003772	ST7 (ENSATEG00000003840)	ENSATEG00000003911	wnt2 (ENSATEG00000003930)	asz1 (ENSATEG00000003952)	cftr (ENSATEG00000004026)	ENSATEG00000025399	ENSATEG00000004150	ENSATEG00000004341	ENSATEG00000004374	ENSATEG00000004475	ENSATEG00000028929
Siamese fighting fish	MODERN SPECIES	17	RASSF9 (ENSBSLG00000016104)	NTS (ENSBSLG00000016100)	MGAT4C (ENSBSLG00000016090)	eif4g2b (ENSBSLG00000016007)	ENSBSLG00000015996	zgc:103499 (ENSBSLG00000015994)	cep290 (ENSBSLG00000015838)	TMTC3 (ENSBSLG00000015809)	kitlga (ENSBSLG00000015796)	ENSBSLG00000015599	dusp6 (ENSBSLG00000015570)	poc1b (ENSBSLG00000015531)	cep41 (ENSBSLG00000015495)	cpa1 (ENSBSLG00000015367)	tes (ENSBSLG00000015339) #21	cav2 (ENSBSLG00000015272) #22	met (ENSBSLG00000015170) #25	ENSBSLG00000014941	st7 (ENSBSLG00000013473)	wnt2 (ENSBSLG00000013166)	asz1 (ENSBSLG00000013057)	cftr (ENSBSLG00000009227)	ENSBSLG00000008941	ENSBSLG00000008912	ENSBSLG00000008557	ENSBSLG00000008541	dldh (ENSBSLG00000008044)	SYT8 (ENSBSLG00000008013)	TMED6 (ENSBSLG00000007994)	ENSBSLG00000007970	ENSBSLG00000007950
Carangaria	ANCESTRAL SPECIES	6	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Carangaria_A	ANCESTRAL SPECIES		ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000161051.a.a.b.b.b.b.f	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208
Barramundi perch	MODERN SPECIES	1					zgc:103499 (ENSLCAG00010003064)	cep290 (ENSLCAG00010002829)	ENSLCAG00010002766	TMTC3 (ENSLCAG00010002762)	kitlga (ENSLCAG00010002753)	ENSLCAG00010002750	dusp6 (ENSLCAG00010002746)	poc1b (ENSLCAG00010002741)	cep41 (ENSLCAG00010002736)	cpa1 (ENSLCAG00010002683)	tes (ENSLCAG00010002530) #21	cav2 (ENSLCAG00010002471) #22	cav1 (ENSLCAG00010002465) ##22	met (ENSLCAG00010002448) #25	ENSLCAG00010002436	st7 (ENSLCAG00010002231)	wnt2 (ENSLCAG00010002142)	asz1 (ENSLCAG00010002133)	cftr (ENSLCAG00010000986)	ENSLCAG00010000379	ENSLCAG00010000368	ENSLCAG00010023612	ENSLCAG00010023597	ENSLCAG00010023494	ENSLCAG00010023410	gtse1 (ENSLCAG00010023387)	atp2b1b (ENSLCAG00010023239)
Seriola	ANCESTRAL SPECIES	173															ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293
Greater amberjack	MODERN SPECIES	29															tes (ENSSDUG00000016665) #21	cav2 (ENSSDUG00000016661) #22	cav1 (ENSSDUG00000016656) ##22	met (ENSSDUG00000016591) #25	ENSSDUG00000016536	st7 (ENSSDUG00000016517)	wnt2 (ENSSDUG00000016502)	asz1 (ENSSDUG00000016456)	cftr (ENSSDUG00000016329)	CTTNBP2 (ENSSDUG00000016286)	chmp4bb (ENSSDUG00000016264)	eif2s2 (ENSSDUG00000016126)	srsf6a (ENSSDUG00000016097)	L3MBTL1 (ENSSDUG00000016060)	sgk2a (ENSSDUG00000016037)	ENSSDUG00000015964	nsun5 (ENSSDUG00000015935)
Yellowtail amberjack	MODERN SPECIES	3183							MGAT4C (ENSSLDG00000009859)	NTS (ENSSLDG00000009844)	RASSF9 (ENSSLDG00000009838)	ENSSLDG00000009825	alx1 (ENSSLDG00000009802)	ENSSLDG00000009785	SLC6A15 (ENSSLDG00000009765)	lrrk2 (ENSSLDG00000009648)	tes (ENSSLDG00000009590) #21	cav2 (ENSSLDG00000009574) #22	cav1 (ENSSLDG00000009555) ##22	met (ENSSLDG00000009494) #25	ENSSLDG00000009437	st7 (ENSSLDG00000009379)	wnt2 (ENSSLDG00000009354)	asz1 (ENSSLDG00000009322)	cftr (ENSSLDG00000009217)	ENSSLDG00000009192
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Turbot	MODERN SPECIES	1	ENSSMAG00000028267	MGAT4C (ENSSMAG00000000567)	eif4g2b (ENSSMAG00000000556)	ENSSMAG00000000554	zgc:103499 (ENSSMAG00000000550)	cep290 (ENSSMAG00000000534)	TMTC3 (ENSSMAG00000000519)	kitlga (ENSSMAG00000000514)	ENSSMAG00000000503	dusp6 (ENSSMAG00000000498)	poc1b (ENSSMAG00000000484)	cep41 (ENSSMAG00000000451)	cep41 (ENSSMAG00000000469)	cpa1 (ENSSMAG00000000432)	tes (ENSSMAG00000000421) #21	cav2 (ENSSMAG00000033752) #22	cav1 (ENSSMAG00000000415) ##22	met (ENSSMAG00000000407) #25	ENSSMAG00000000395	ENSSMAG00000035500	ST7 (ENSSMAG00000000374)	asz1 (ENSSMAG00000018661)	ENSSMAG00000018670	ENSSMAG00000018690	ENSSMAG00000018707	ENSSMAG00000018708	ENSSMAG00000018716	ENSSMAG00000018534	swap70b (ENSSMAG00000018537)	wee1 (ENSSMAG00000018566)	znf143b (ENSSMAG00000018583)
Tongue sole	MODERN SPECIES	16	anpeplb (ENSCSEG00000021448)	cry2 (ENSCSEG00000021440)	mapk8ip1a (ENSCSEG00000021439)	cstpp1 (ENSCSEG00000021438)	ckap5 (ENSCSEG00000021437)	ENSCSEG00000021436	alx1 (ENSCSEG00000021381)	ENSCSEG00000021379	zgc:101566 (ENSCSEG00000021378)	CHST1 (ENSCSEG00000021377)	dusp6 (ENSCSEG00000021376)	ENSCSEG00000021375	cep41 (ENSCSEG00000021372)	cpa1 (ENSCSEG00000021374)	tes (ENSCSEG00000021371) #21	cav2 (ENSCSEG00000021370) #22	cav1 (ENSCSEG00000021369) ##22	met (ENSCSEG00000021367) #25	ENSCSEG00000021365	st7 (ENSCSEG00000021354)	wnt2 (ENSCSEG00000021352)	ASZ1 (ENSCSEG00000021350)	cftr (ENSCSEG00000021346)	eif4g2b (ENSCSEG00000021334)	ENSCSEG00000021329	zgc:103499 (ENSCSEG00000021327)	FGF6 (ENSCSEG00000021326)	zgc:77158 (ENSCSEG00000021325)	zgc:154077 (ENSCSEG00000021322)	e2f4 (ENSCSEG00000021321)	ELMO3 (ENSCSEG00000021316)
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Tetraodontidae	ANCESTRAL SPECIES	11	ENSGT00940000159662.c.b	ENSGT00940000160199	ENSGT00940000153438.a.s	ENSGT00390000009140	ENSGT00950000183113.b.a	ENSGT00940000157431.c.a	ENSGT00390000016435.g.a	ENSGT00940000156052.k.b	ENSGT00390000001424.wb.a	ENSGT00390000002564.b.d	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000159701	ENSGT00930000151035.a	ENSGT00390000012069
Fugu	MODERN SPECIES	21	cd82b (ENSTRUG00000017050)	tspan18b (ENSTRUG00000021855)	alx4b (ENSTRUG00000017056)	lmo2 (ENSTRUG00000020798)	ENSTRUG00000017064	csk (ENSTRUG00000017074)	edc3 (ENSTRUG00000017078)	cpa1 (ENSTRUG00000024152)	arid3b (ENSTRUG00000017079)	cox5aa (ENSTRUG00000017081)	RPP25 (ENSTRUG00000017082)	dusp6 (ENSTRUG00000022228)	poc1b (ENSTRUG00000017088)	cep41 (ENSTRUG00000017093)	tes (ENSTRUG00000017099) #21	cav2 (ENSTRUG00000026846) #22	cav1 (ENSTRUG00000025224) ##22	met (ENSTRUG00000017114) #25	capza2 (ENSTRUG00000022465)	st7 (ENSTRUG00000017133)	wnt2 (ENSTRUG00000017138)	asz1 (ENSTRUG00000017140)	cftr (ENSTRUG00000017143)	ENSTRUG00000031818	ENSTRUG00000001202	ENSTRUG00000001289	ENSTRUG00000001491	atp2b1b (ENSTRUG00000001560)	deaf1 (ENSTRUG00000002931)	ighmbp2 (ENSTRUG00000003491)	chid1 (ENSTRUG00000021123)
Tetraodon	MODERN SPECIES	4	tspan18b (ENSTNIG00000016040)	alx4b (ENSTNIG00000016041)	lmo2 (ENSTNIG00000016042)	caprin1b (ENSTNIG00000016043)	nat10 (ENSTNIG00000016044)	adal (ENSTNIG00000016045)	csk (ENSTNIG00000016046)	edc3 (ENSTNIG00000016047)	cox5aa (ENSTNIG00000016049)	RPP25 (ENSTNIG00000016050)	dusp6 (ENSTNIG00000016051)	poc1b (ENSTNIG00000016052)	cep41 (ENSTNIG00000016053)	cpa1 (ENSTNIG00000016054)	tes (ENSTNIG00000016055) #21	cav2 (ENSTNIG00000016056) #22	cav1 (ENSTNIG00000016057) ##22	met (ENSTNIG00000016058) #25	ENSTNIG00000016059	st7 (ENSTNIG00000016060)	wnt2 (ENSTNIG00000016061)	asz1 (ENSTNIG00000016062)	cftr (ENSTNIG00000016063)	CTTNBP2 (ENSTNIG00000016064)	ENSTNIG00000016065	gtse1 (ENSTNIG00000016066)	atp2b1b (ENSTNIG00000016067)	deaf1 (ENSTNIG00000016068)	ighmbp2 (ENSTNIG00000016069)	chid1 (ENSTNIG00000016070)	cd151 (ENSTNIG00000016071)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Ballan wrasse	MODERN SPECIES	98	NTS (ENSLBEG00000002262)	MGAT4C (ENSLBEG00000002287)	eif4g2b (ENSLBEG00000002302)	ENSLBEG00000002385	zgc:103499 (ENSLBEG00000002396)	cep290 (ENSLBEG00000002419)	TMTC3 (ENSLBEG00000002565)	kitlga (ENSLBEG00000002627)	ENSLBEG00000002677	ENSLBEG00000002775	dusp6 (ENSLBEG00000002791)	poc1b (ENSLBEG00000002830)	cep41 (ENSLBEG00000002893)	cpa1 (ENSLBEG00000002913)	tes (ENSLBEG00000002967) #21	cav2 (ENSLBEG00000003005) #22	cav1 (ENSLBEG00000003024) ##22	met (ENSLBEG00000003043) #25	ENSLBEG00000003082	st7 (ENSLBEG00000003148)	wnt2 (ENSLBEG00000003241)	asz1 (ENSLBEG00000003271)	cftr (ENSLBEG00000003307)	CTTNBP2 (ENSLBEG00000003443)
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.b	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701
Perciformes	ANCESTRAL SPECIES	7	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.b	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c	ENSGT00390000017767.a.b
Lumpfish	MODERN SPECIES	21	MGAT4C (ENSCLMG00005012442)	ENSCLMG00005012441	eif4g2b (ENSCLMG00005011254)	ENSCLMG00005011240	zgc:103499 (ENSCLMG00005011238)	cep290 (ENSCLMG00005010870)	TMTC3 (ENSCLMG00005010862)	kitlga (ENSCLMG00005010861)	ENSCLMG00005010859	POC1B (ENSCLMG00005010837)	ENSCLMG00005010836	cep41 (ENSCLMG00005010834)	ENSCLMG00005010831	cpa1 (ENSCLMG00005010830)	tes (ENSCLMG00005010828) #21	cav2 (ENSCLMG00005010827) #22	cav1 (ENSCLMG00005010826) ##22	ENSCLMG00005010825	met (ENSCLMG00005009874) #25	ENSCLMG00005008444	cftr (ENSCLMG00005005995)	ENSCLMG00005005985	ENSCLMG00005005961	ENSCLMG00005005959	ENSCLMG00005005958	ENSCLMG00005003997	BET1L (ENSCLMG00005003988)	deaf1 (ENSCLMG00005003985)	ENSCLMG00005003984	drd4a (ENSCLMG00005003931)	ENSCLMG00005003926
Stickleback	MODERN SPECIES	14	RASSF9 (ENSGACG00000009553)	NTS (ENSGACG00000009549)	MGAT4C (ENSGACG00000009544)	eif4g2b (ENSGACG00000009454)	ENSGACG00000009450	zgc:103499 (ENSGACG00000009418)	cep290 (ENSGACG00000009388)	TMTC3 (ENSGACG00000009378)	kitlga (ENSGACG00000009373)	ENSGACG00000009345	dusp6 (ENSGACG00000009342)	POC1B (ENSGACG00000009335)	cep41 (ENSGACG00000009309)	cpa1 (ENSGACG00000009214)	tes (ENSGACG00000009210) #21	cav2 (ENSGACG00000009202) #22	cav1 (ENSGACG00000009201) ##22	met (ENSGACG00000009190) #25	ENSGACG00000009107	st7 (ENSGACG00000009091)	wnt2 (ENSGACG00000009061)	asz1 (ENSGACG00000009054)	cftr (ENSGACG00000009039)	CTTNBP2 (ENSGACG00000009015)	ENSGACG00000009014	ENSGACG00000008997	ENSGACG00000008981	ENSGACG00000008957	BET1L (ENSGACG00000008949)	deaf1 (ENSGACG00000008942)	drd4a (ENSGACG00000008935)
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.b	ENSGT00940000163716.c.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208
Pike perch	MODERN SPECIES	51			eif4g2b (ENSSLUG00000018294)	ENSSLUG00000018251	ENSSLUG00000018246	zgc:103499 (ENSSLUG00000018243)	cep290 (ENSSLUG00000017639)	TMTC3 (ENSSLUG00000017550)	kitlga (ENSSLUG00000017537)	ENSSLUG00000017480	dusp6 (ENSSLUG00000017467)	poc1b (ENSSLUG00000016865)	cep41 (ENSSLUG00000016828)	cpa1 (ENSSLUG00000016768)	tes (ENSSLUG00000016752) #21	cav2 (ENSSLUG00000016749) #22	cav1 (ENSSLUG00000016735) ##22	met (ENSSLUG00000016694) #25	ENSSLUG00000016639	st7 (ENSSLUG00000013546)	ENSSLUG00000013476	ENSSLUG00000013474	asz1 (ENSSLUG00000013461)	cftr (ENSSLUG00000008780)	ENSSLUG00000008636	ENSSLUG00000008594	ENSSLUG00000008584	ENSSLUG00000008579	ENSSLUG00000024614	ENSSLUG00000024610	ENSSLUG00000024607
Channel bull blenny	MODERN SPECIES	20	RASSF9 (ENSCGOG00000010338)	ENSCGOG00000010341	MGAT4C (ENSCGOG00000010345)	eif4g2b (ENSCGOG00000010359)	ENSCGOG00000010997	zgc:103499 (ENSCGOG00000011002)	cep290 (ENSCGOG00000011023)	TMTC3 (ENSCGOG00000011107)	kitlga (ENSCGOG00000011439)	ENSCGOG00000011442	dusp6 (ENSCGOG00000011447)	poc1b (ENSCGOG00000011452)	cep41 (ENSCGOG00000011654)	cpa1 (ENSCGOG00000011673)	tes (ENSCGOG00000011867) #21	cav2 (ENSCGOG00000011869) #22	cav1 (ENSCGOG00000011870) ##22	met (ENSCGOG00000011876) #25	ENSCGOG00000011915	ST7 (ENSCGOG00000012578)	wnt2 (ENSCGOG00000012579)	asz1 (ENSCGOG00000012583)	cftr (ENSCGOG00000012633)	ENSCGOG00000015576	ENSCGOG00000015580	ENSCGOG00000015611	ENSCGOG00000015736	gtse1 (ENSCGOG00000015945)	atp2b1b (ENSCGOG00000015957)	BET1L (ENSCGOG00000015967)	deaf1 (ENSCGOG00000015969)
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.b	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701
Gilthead seabream	MODERN SPECIES	22	eif4g2b (ENSSAUG00010006867)	ENSSAUG00010007336	zgc:103499 (ENSSAUG00010007339)	cep290 (ENSSAUG00010007356)	TMTC3 (ENSSAUG00010007374)	kitlga (ENSSAUG00010007389)	ENSSAUG00010007397	ENSSAUG00010007416	dusp6 (ENSSAUG00010008668)	ENSSAUG00010008671	poc1b (ENSSAUG00010008683)	cep41 (ENSSAUG00010008957)	cpa1 (ENSSAUG00010008967)	tes (ENSSAUG00010009004) #21	KLHL10 (ENSSAUG00010009006)	cav2 (ENSSAUG00010009007) #22	cav1 (ENSSAUG00010009010) ##22	met (ENSSAUG00010009028) #25	ENSSAUG00010009821	st7 (ENSSAUG00010009994)	wnt2 (ENSSAUG00010013543)	asz1 (ENSSAUG00010013545)	cftr (ENSSAUG00010013612)	CTTNBP2 (ENSSAUG00010019880)	ENSSAUG00010019895	ENSSAUG00010019902	ENSSAUG00010019904	ENSSAUG00010019911	ENSSAUG00010019921	atp2b1b (ENSSAUG00010020176)	deaf1 (ENSSAUG00010025381)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.n	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Large yellow croaker	MODERN SPECIES	481	RASSF9 (ENSLCRG00005014191)	NTS (ENSLCRG00005014190)	MGAT4C (ENSLCRG00005014188)	eif4g2b (ENSLCRG00005014179)	ENSLCRG00005014173	zgc:103499 (ENSLCRG00005014169)	cep290 (ENSLCRG00005013984)	TMTC3 (ENSLCRG00005013821)	kitlga (ENSLCRG00005013812)	ENSLCRG00005013743	dusp6 (ENSLCRG00005013739)	poc1b (ENSLCRG00005013730)	cep41 (ENSLCRG00005013709)	cpa1 (ENSLCRG00005013700)	tes (ENSLCRG00005013699) #21	cav2 (ENSLCRG00005013698) #22	cav1 (ENSLCRG00005013678) ##22	met (ENSLCRG00005013657) #25	ENSLCRG00005013628	st7 (ENSLCRG00005010555)	wnt2 (ENSLCRG00005010533)	asz1 (ENSLCRG00005010530)	cftr (ENSLCRG00005002834)	ENSLCRG00005002471	ENSLCRG00005002442	ENSLCRG00005002425	ENSLCRG00005002414	ppp1r27b (ENSLCRG00005002406)	p4hb (ENSLCRG00005022003)	ENSLCRG00005021987	ENSLCRG00005021986
European seabass	MODERN SPECIES	19	alx1 (ENSDLAG00005019960)	RASSF9 (ENSDLAG00005019976)	NTS (ENSDLAG00005027373)	MGAT4C (ENSDLAG00005029092)	eif4g2b (ENSDLAG00005019994)	zgc:103499 (ENSDLAG00005030767)	cep290 (ENSDLAG00005020373)	TMTC3 (ENSDLAG00005020800)	kitlga (ENSDLAG00005020879)	ENSDLAG00005020912	dusp6 (ENSDLAG00005030415)	poc1b (ENSDLAG00005020981)	cep41 (ENSDLAG00005021114)	cpa1 (ENSDLAG00005021121)	tes (ENSDLAG00005021168) #21	cav2 (ENSDLAG00005021177) #22	cav1 (ENSDLAG00005021180) ##22	met (ENSDLAG00005021191) #25	ENSDLAG00005021236	ST7 (ENSDLAG00005021258)	asz1 (ENSDLAG00005027443)	CFTR (ENSDLAG00005021678)	ENSDLAG00005023020	ENSDLAG00005019988	ENSDLAG00005023037	ENSDLAG00005023041	ENSDLAG00005023046	ENSDLAG00005023067	ENSDLAG00005031146	ENSDLAG00005010435	ENSDLAG00005010447
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000174622	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208
Oryzias	ANCESTRAL SPECIES	67				ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b	ENSGT00940000158082.b.m.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154189.B	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c	ENSGT00940000175389
Oryzias_b	ANCESTRAL SPECIES	104				ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b	ENSGT00940000158082.b.m.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25
Indian medaka	MODERN SPECIES	246		ENSOMEG00000007742	zgc:103499 (ENSOMEG00000007724)	ENSOMEG00000007709	ENSOMEG00000007695	TMTC3 (ENSOMEG00000007634)	kitlga (ENSOMEG00000007535)	ENSOMEG00000007499	dusp6 (ENSOMEG00000000184)	poc1b (ENSOMEG00000007447)	cep41 (ENSOMEG00000007415)	CPA1 (ENSOMEG00000007381)	CPA1 (ENSOMEG00000007363)	tes (ENSOMEG00000007327) #21	ENSOMEG00000007291	cav2 (ENSOMEG00000007263) #22	cav1 (ENSOMEG00000007254) ##22	met (ENSOMEG00000007236) #25	ENSOMEG00000007169	ENSOMEG00000007152
Javanese ricefish	MODERN SPECIES	20	GRAMD4 (ENSOJAG00000017580)	ENSOJAG00000017640	ENSOJAG00000017668	ENSOJAG00000017687	zgc:103499 (ENSOJAG00000017723)	TMTC3 (ENSOJAG00000018084)	kitlga (ENSOJAG00000018140)	ENSOJAG00000018171	dusp6 (ENSOJAG00000018313)	poc1b (ENSOJAG00000018342)	cep41 (ENSOJAG00000018368)	CPA1 (ENSOJAG00000018426)	CPA1 (ENSOJAG00000018616)	ENSOJAG00000018915	tes (ENSOJAG00000018932) #21	cav2 (ENSOJAG00000019015) #22	cav1 (ENSOJAG00000019030) ##22	met (ENSOJAG00000019095) #25	ENSOJAG00000019317	ENSOJAG00000019339	ENSOJAG00000000105	ENSOJAG00000000113	ENSOJAG00000000152	ENSOJAG00000000368	hapln3 (ENSOJAG00000000398)	mfge8b (ENSOJAG00000000430)	ABHD2 (ENSOJAG00000000466)	rlbp1b (ENSOJAG00000000480)	ENSOJAG00000000491	pdia3 (ENSOJAG00000000547)	CKMT1A (ENSOJAG00000000661)
Oryzias_a	ANCESTRAL SPECIES	86	ENSGT00940000158251	ENSGT00940000157277	ENSGT00940000158267	ENSGT00940000178060	ENSGT00500000044938	ENSGT00730000111039.C.g	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b	ENSGT00940000158082.b.m.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154189.B	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c
Japanese Medaka HdrR	MODERN SPECIES	20	ENSORLG00000022008	zgc:103499 (ENSORLG00000019937)	ENSORLG00000028369	ENSORLG00000023432	TMTC3 (ENSORLG00000019902)	ENSORLG00000027294	kitlga (ENSORLG00000022628)	ENSORLG00000019882	ENSORLG00000023904	dusp6 (ENSORLG00000019848)	poc1b (ENSORLG00000019829)	cep41 (ENSORLG00000019821)	ENSORLG00000019810	CPA1 (ENSORLG00000021902)	tes (ENSORLG00000019756) #21	cav2 (ENSORLG00000027751) #22	cav1 (ENSORLG00000019746) ##22	ENSORLG00000024193	met (ENSORLG00000019737) #25	ENSORLG00000019685	st7 (ENSORLG00000019632)	wnt2 (ENSORLG00000019570)	asz1 (ENSORLG00000028103)	cftr (ENSORLG00000019555)	CTTNBP2 (ENSORLG00000019530)	mc6ast3 (ENSORLG00000019499)	ENSORLG00000019463	ENSORLG00000025815	ENSORLG00000027718	BET1L (ENSORLG00000026338)	deaf1 (ENSORLG00000019407)
Chinese medaka	MODERN SPECIES	2964																cav2 (ENSOSIG00000003376) #22
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g.f	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b.b	ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000174622	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g.f	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b.b	ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000163716.c.a.a.a	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000174622	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208
NAME_4	ANCESTRAL SPECIES	72			ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g.f	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.b.b	ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293.ib	ENSGT00940000158293.hb	ENSGT00940000163716.c.a.a.a	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000164853.a.b	ENSGT00550000074844
Mummichog	MODERN SPECIES	2205			eif4g2b (ENSFHEG00000010488)	ENSFHEG00000010422	zgc:103499 (ENSFHEG00000010395)	cep290 (ENSFHEG00000010386)	TMTC3 (ENSFHEG00000010368)	kitlga (ENSFHEG00000010322)	ENSFHEG00000010306	dusp6 (ENSFHEG00000010215)	poc1b (ENSFHEG00000010195)	cep41 (ENSFHEG00000010184)	CPA1 (ENSFHEG00000010173)	CPA1 (ENSFHEG00000010161)	tes (ENSFHEG00000010144) #21	cav2 (ENSFHEG00000010100) #22	cav1 (ENSFHEG00000010094) ##22	met (ENSFHEG00000010079) #25	ENSFHEG00000009987	st7 (ENSFHEG00000009944)	wnt2 (ENSFHEG00000009707)	asz1 (ENSFHEG00000009691)	cftr (ENSFHEG00000009671)	ENSFHEG00000009567	ENSFHEG00000009557	ENSFHEG00000009543	ENSFHEG00000009504	BET1L (ENSFHEG00000009463)	deaf1 (ENSFHEG00000009441)	ENSFHEG00000009421	dldh (ENSFHEG00000009356)
Sheepshead minnow	MODERN SPECIES	182	smpd3 (ENSCVAG00000008296)	eif4g2b (ENSCVAG00000008364)	ENSCVAG00000008373	zgc:103499 (ENSCVAG00000008386)	cep290 (ENSCVAG00000000243)	TMTC3 (ENSCVAG00000008544)	kitlga (ENSCVAG00000008551)	ENSCVAG00000008578	dusp6 (ENSCVAG00000008591)	poc1b (ENSCVAG00000008612)	ENSCVAG00000008619	cep41 (ENSCVAG00000008638)	CPA1 (ENSCVAG00000008686)	CPA1 (ENSCVAG00000008728)	tes (ENSCVAG00000008770) #21	cav2 (ENSCVAG00000008780) #22	cav1 (ENSCVAG00000008796) ##22	met (ENSCVAG00000008825) #25	ENSCVAG00000008861	st7 (ENSCVAG00000008922)	wnt2 (ENSCVAG00000008931)	asz1 (ENSCVAG00000008967)	cftr (ENSCVAG00000010219)	ENSCVAG00000010247	ENSCVAG00000010253	gtse1 (ENSCVAG00000010260)	ENSCVAG00000010303	BET1L (ENSCVAG00000010326)	deaf1 (ENSCVAG00000010334)	ENSCVAG00000010385	dldh (ENSCVAG00000010469)
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00940000155352.gb.b	ENSGT00940000172190.A.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g.f	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.m.b.b	ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000164853.a.b
Poecilia	ANCESTRAL SPECIES	5	ENSGT00940000155352.gb.b	ENSGT00940000172190.A.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g.f	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.m.b.b	ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000164853.a.b
NAME_6	ANCESTRAL SPECIES	114	ENSGT00940000172190.A.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C.g.f	ENSGT00940000157538.f	ENSGT00940000166588	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.m.b.b	ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154189.B	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000164853.a.b	ENSGT00550000074844	ENSGT00940000160892
Amazon molly	MODERN SPECIES	508		ENSPFOG00000015711	eif4g2b (ENSPFOG00000015554)	ENSPFOG00000023233	zgc:103499 (ENSPFOG00000015478)	cep290 (ENSPFOG00000015079)	ENSPFOG00000014970	kitlga (ENSPFOG00000014949)	ENSPFOG00000014741	dusp6 (ENSPFOG00000014696)	POC1B (ENSPFOG00000014656)	cep41 (ENSPFOG00000014618)	CPA1 (ENSPFOG00000014613)	CPA1 (ENSPFOG00000014495)	tes (ENSPFOG00000014458) #21	cav2 (ENSPFOG00000014452) #22	cav1 (ENSPFOG00000014440) ##22	met (ENSPFOG00000014285) #25
Sailfin molly	MODERN SPECIES	582																cav2 (ENSPLAG00000013465) #22	cav1 (ENSPLAG00000013522) ##22	met (ENSPLAG00000013575) #25	ENSPLAG00000013627	st7 (ENSPLAG00000013650)	wnt2 (ENSPLAG00000013741)	asz1 (ENSPLAG00000013749)	cftr (ENSPLAG00000016694)	CTTNBP2 (ENSPLAG00000016915)	ENSPLAG00000016924	ENSPLAG00000016995	BET1L (ENSPLAG00000017012)	deaf1 (ENSPLAG00000017022)
Guppy	MODERN SPECIES	458	ENSPREG00000003429	eif4g2b (ENSPREG00000003216)	ENSPREG00000003171	zgc:103499 (ENSPREG00000003158)	ENSPREG00000003145	cep290 (ENSPREG00000003071)	TMTC3 (ENSPREG00000003003)	kitlga (ENSPREG00000002961)	ENSPREG00000002944	dusp6 (ENSPREG00000002924)	POC1B (ENSPREG00000002908)	cep41 (ENSPREG00000002888)	CPA1 (ENSPREG00000002875)	CPA1 (ENSPREG00000002847)	tes (ENSPREG00000002813) #21	cav2 (ENSPREG00000002790) #22	ENSPREG00000002783	met (ENSPREG00000002766) #25	ENSPREG00000002736	st7 (ENSPREG00000002700)	wnt2 (ENSPREG00000002673)	asz1 (ENSPREG00000002662)	cftr (ENSPREG00000002638)	CTTNBP2 (ENSPREG00000002579)	ENSPREG00000002507	ENSPREG00000002490	ENSPREG00000002453	ENSPREG00000002425	deaf1 (ENSPREG00000002403)	ENSPREG00000002322	dldh (ENSPREG00000002267)
Platyfish	MODERN SPECIES	11	ENSXMAG00000022483	ENSXMAG00000022924	ENSXMAG00000022045	ENSXMAG00000027129	ENSXMAG00000002183	ENSXMAG00000028266	ENSXMAG00000028930	slc13a1 (ENSXMAG00000001129)	ENSXMAG00000010676	wasla (ENSXMAG00000010683)	hyal6 (ENSXMAG00000014417)	HYAL4 (ENSXMAG00000014418)	SPAM1 (ENSXMAG00000014419)	CPA1 (ENSXMAG00000014420)	tes (ENSXMAG00000014447) #21	cav2 (ENSXMAG00000028418) #22	cav1 (ENSXMAG00000023073) ##22	met (ENSXMAG00000014457) #25	ENSXMAG00000014471	st7 (ENSXMAG00000004417)	wnt2 (ENSXMAG00000004456)	asz1 (ENSXMAG00000014458)	cftr (ENSXMAG00000006463)	CTTNBP2 (ENSXMAG00000011487)	ENSXMAG00000017307	ENSXMAG00000011708	atp2b1b (ENSXMAG00000011746)	BET1L (ENSXMAG00000023928)	deaf1 (ENSXMAG00000013352)	ENSXMAG00000013383	ENSXMAG00000029031
Aplocheiloidei	ANCESTRAL SPECIES	297														ENSGT00940000158082.b.m.b.a	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25
Turquoise killifish	MODERN SPECIES	1622	lrrk2 (ENSNFUG00015005480)	SLC6A15 (ENSNFUG00015005849)	POC1B (ENSNFUG00015005865)	ENSNFUG00015005907	ENSNFUG00015005991	TMTC3 (ENSNFUG00015006008)	cep290 (ENSNFUG00015006037)	C25H12ORF29 (ENSNFUG00015006127)	ENSNFUG00015006135	MGAT4C (ENSNFUG00015006136)	ENSNFUG00015006148	ENSNFUG00015006152	ENSNFUG00015006154	RASSF9 (ENSNFUG00015006156)	tes (ENSNFUG00015006161) #21	CAV2 (ENSNFUG00015006168) #22	CAV1 (ENSNFUG00015006176) ##22	ENSNFUG00015006182	ENSNFUG00015006184	met (ENSNFUG00015006189) #25	ENSNFUG00015006194	cftr (ENSNFUG00015006273)	ENSNFUG00015006498	ENSNFUG00015006503	SOX6 (ENSNFUG00015006547)	ENSNFUG00015007013	C18H11ORF58 (ENSNFUG00015007018)	plekha7a (ENSNFUG00015007039)	ENSNFUG00015007067	PPP1R15B (ENSNFUG00015007068)	rps13 (ENSNFUG00015007074)
Mangrove rivulus	MODERN SPECIES	324														cpa1 (ENSKMAG00000011054)	tes (ENSKMAG00000011083) #21	cav2 (ENSKMAG00000011110) #22	cav1 (ENSKMAG00000011116) ##22	ENSKMAG00000011128
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000154527.a.a.b.b	ENSGT00940000160208	ENSGT00940000159701
Pomacentridae	ANCESTRAL SPECIES	93	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567.i	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00940000158686	ENSGT00940000160208	ENSGT00940000159701	ENSGT00940000160974.b.c	ENSGT00390000017767.a.b
Pomacentridae_A	ANCESTRAL SPECIES	125	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000180028	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567.i	ENSGT00940000158293
Amphiprion	ANCESTRAL SPECIES	137	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000180028	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b.d	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567.i	ENSGT00940000158293	ENSGT00940000153377.B	ENSGT00940000164138	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019
Orange clownfish	MODERN SPECIES	18	eif4g2b (ENSAPEG00000014252)	ENSAPEG00000014212	zgc:103499 (ENSAPEG00000014196)	cep290 (ENSAPEG00000014041)	TMTC3 (ENSAPEG00000013972)	ENSAPEG00000013876	kitlga (ENSAPEG00000013833)	ENSAPEG00000013783	ENSAPEG00000013763	dusp6 (ENSAPEG00000013739)	poc1b (ENSAPEG00000013693)	CPA1 (ENSAPEG00000013652)	CPA1 (ENSAPEG00000013593)	CPA1 (ENSAPEG00000013570)	tes (ENSAPEG00000013538) #21	cav2 (ENSAPEG00000013525) #22	cav1 (ENSAPEG00000013506) ##22	met (ENSAPEG00000013480) #25	ENSAPEG00000013404	ENSAPEG00000013385	st7 (ENSAPEG00000013345)	wnt2 (ENSAPEG00000013319)	asz1 (ENSAPEG00000013275)	cftr (ENSAPEG00000013201)	CTTNBP2 (ENSAPEG00000013046)	ENSAPEG00000013010	ENSAPEG00000012995	npsn (ENSAPEG00000012986)	ENSAPEG00000012969	ENSAPEG00000012951	ENSAPEG00000012946
Clown anemonefish	MODERN SPECIES	1322							kitlga (ENSAOCG00000017230)	ENSAOCG00000017248	dusp6 (ENSAOCG00000017253)	poc1b (ENSAOCG00000017276)	CPA1 (ENSAOCG00000017308)	ENSAOCG00000017326	CPA1 (ENSAOCG00000017374)	CPA1 (ENSAOCG00000017430)	tes (ENSAOCG00000017493) #21	cav2 (ENSAOCG00000017513) #22	cav1 (ENSAOCG00000017536) ##22	met (ENSAOCG00000017600) #25	ENSAOCG00000017618	st7 (ENSAOCG00000002062)	wnt2 (ENSAOCG00000017706)	asz1 (ENSAOCG00000017712)	ENSAOCG00000017730
Spiny chromis	MODERN SPECIES	1660														ENSAPOG00000008885	tes (ENSAPOG00000008921) #21	cav2 (ENSAPOG00000008939) #22
Bicolor damselfish	MODERN SPECIES	348															tes (ENSSPAG00000008727) #21	cav2 (ENSSPAG00000008756) #22	cav1 (ENSSPAG00000008767) ##22	met (ENSSPAG00000008782) #25	ENSSPAG00000008838	st7 (ENSSPAG00000008861)	wnt2 (ENSSPAG00000008915)	asz1 (ENSSPAG00000008937)	cftr (ENSSPAG00000008983)	CTTNBP2 (ENSSPAG00000009045)	ENSSPAG00000009111	ENSSPAG00000009130	BET1L (ENSSPAG00000009163)	deaf1 (ENSSPAG00000009175)	drd4a (ENSSPAG00000009200)	ENSSPAG00000009216	GRAMD4 (ENSSPAG00000009245)
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B
Midas cichlid	MODERN SPECIES	323									dusp6 (ENSACIG00000022442)	ENSACIG00000022434	poc1b (ENSACIG00000022418)	cep41 (ENSACIG00000022396)	CPA1 (ENSACIG00000022378)	CPA1 (ENSACIG00000022217)	tes (ENSACIG00000022199) #21	cav2 (ENSACIG00000022191) #22	cav1 (ENSACIG00000022158) ##22	met (ENSACIG00000022117) #25	ENSACIG00000022105	ENSACIG00000022098
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00390000010968.a	ENSGT00390000017767.a.b	ENSGT00940000160974.b.c	ENSGT00940000159701
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00390000010968.a	ENSGT00390000017767.a.b	ENSGT00940000160974.b.c	ENSGT00940000159701
Haplochromini	ANCESTRAL SPECIES		ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00390000010968.a	ENSGT00390000017767.a.b	ENSGT00940000160974.b.c	ENSGT00940000159701
Burton s mouthbrooder	MODERN SPECIES	515													cpa1 (ENSHBUG00000008899)	tes (ENSHBUG00000008931) #21	ENSHBUG00000008956	cav2 (ENSHBUG00000008964) #22	cav1 (ENSHBUG00000008977) ##22	met (ENSHBUG00000009006) #25	ENSHBUG00000009066	st7 (ENSHBUG00000009147)	wnt2 (ENSHBUG00000009173)	asz1 (ENSHBUG00000009186)	cftr (ENSHBUG00000014995)	CTTNBP2 (ENSHBUG00000015212)	ENSHBUG00000001101	ENSHBUG00000015240	ENSHBUG00000015256	GRAMD4 (ENSHBUG00000015351)	ENSHBUG00000015363	drd4a (ENSHBUG00000015368)	deaf1 (ENSHBUG00000015395)
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00390000010968.a	ENSGT00390000017767.a.b	ENSGT00940000160974.b.c	ENSGT00940000159701
Haplochromini_B	ANCESTRAL SPECIES	20	ENSGT00640000091574	ENSGT00940000155352.gb.b	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00940000167617	ENSGT00390000002222	ENSGT00940000158082.b.m.a	ENSGT00940000158082.b.m.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000154856.A.a.c.a.b.a.a.b	ENSGT00940000154856.A.a.c.a.b.a.a.a	ENSGT00940000154189.B	ENSGT00390000010968.a	ENSGT00390000017767.a.b	ENSGT00940000160974.b.c	ENSGT00940000159701
Eastern happy	MODERN SPECIES	19	xpo7 (ENSACLG00000010791)	GFRA2 (ENSACLG00000010980)	ENSACLG00000011135	ENSACLG00000011142	ENSACLG00000011433	ATP6V1B2 (ENSACLG00000011445)	TCF7L1 (ENSACLG00000011476)	ENSACLG00000012273	ENSACLG00000012298	dusp6 (ENSACLG00000012334)	poc1b (ENSACLG00000012360)	cep41 (ENSACLG00000012383)	CPA1 (ENSACLG00000012419)	CPA1 (ENSACLG00000012457)	tes (ENSACLG00000012510) #21	cav2 (ENSACLG00000012607) #22	cav1 (ENSACLG00000012609) ##22	met (ENSACLG00000012614) #25	ENSACLG00000012660	ENSACLG00000012711	st7 (ENSACLG00000012719)	wnt2 (ENSACLG00000012764)	asz1 (ENSACLG00000013100)	ENSACLG00000013191	CTTNBP2 (ENSACLG00000013196)	ENSACLG00000013210	ENSACLG00000013221	ENSACLG00000013233	GRAMD4 (ENSACLG00000013239)	ENSACLG00000013277	ENSACLG00000013281
Zebra mbuna	MODERN SPECIES	1110	eif4g2b (ENSMZEG00005013091)	ENSMZEG00005013133	zgc:103499 (ENSMZEG00005013143)	cep290 (ENSMZEG00005013170)	TMTC3 (ENSMZEG00005013248)	kitlga (ENSMZEG00005013271)	ENSMZEG00005013300	ENSMZEG00005013312	ENSMZEG00005013331	dusp6 (ENSMZEG00005013337)	poc1b (ENSMZEG00005013346)	cep41 (ENSMZEG00005013359)	CPA1 (ENSMZEG00005013375)	CPA1 (ENSMZEG00005013395)	tes (ENSMZEG00005013418) #21	cav2 (ENSMZEG00005013427) #22	cav1 (ENSMZEG00005013433) ##22	met (ENSMZEG00005013436) #25	ENSMZEG00005013462	st7 (ENSMZEG00005013500)	wnt2 (ENSMZEG00005013526)	asz1 (ENSMZEG00005013547)	cftr (ENSMZEG00005013754)	ENSMZEG00005022520	ENSMZEG00005022522	ENSMZEG00005022524	ENSMZEG00005022531	GRAMD4 (ENSMZEG00005022537)	drd4a (ENSMZEG00005022552)	deaf1 (ENSMZEG00005022557)	BET1L (ENSMZEG00005022558)
P. nyererei	MODERN SPECIES	595										dusp6 (ENSPNYG00000002254)	poc1b (ENSPNYG00000002169)	cep41 (ENSPNYG00000002161)	CPA1 (ENSPNYG00000002127)	CPA1 (ENSPNYG00000002086)	tes (ENSPNYG00000002054) #21	cav2 (ENSPNYG00000002049) #22	cav1 (ENSPNYG00000002033) ##22	met (ENSPNYG00000002016) #25	ENSPNYG00000001959	st7 (ENSPNYG00000001874)	wnt2 (ENSPNYG00000001830)	asz1 (ENSPNYG00000001790)	ENSPNYG00000001777
Lyretail cichlid	MODERN SPECIES	293	MGAT4C (ENSNBRG00000014584)	eif4g2b (ENSNBRG00000014520)	ENSNBRG00000014501	zgc:103499 (ENSNBRG00000014447)	cep290 (ENSNBRG00000014343)	TMTC3 (ENSNBRG00000014307)	kitlga (ENSNBRG00000014274)	ENSNBRG00000014245	ENSNBRG00000014235	dusp6 (ENSNBRG00000014230)	poc1b (ENSNBRG00000014166)	cep41 (ENSNBRG00000014138)	CPA1 (ENSNBRG00000014114)	CPA1 (ENSNBRG00000014097)	tes (ENSNBRG00000014067) #21	cav2 (ENSNBRG00000014061) #22	cav1 (ENSNBRG00000014051) ##22	met (ENSNBRG00000014037) #25	ENSNBRG00000014001	st7 (ENSNBRG00000013956)	wnt2 (ENSNBRG00000013867)	asz1 (ENSNBRG00000013825)	cftr (ENSNBRG00000012871)	ENSNBRG00000012805	ENSNBRG00000012801	ENSNBRG00000012789	ENSNBRG00000012784	ENSNBRG00000012755	GRAMD4 (ENSNBRG00000012720)	ENSNBRG00000012711	drd4a (ENSNBRG00000012659)
Nile tilapia	MODERN SPECIES	19	MGAT4C (ENSONIG00000031934)	ENSONIG00000033719	eif4g2b (ENSONIG00000003851)	ENSONIG00000036002	zgc:103499 (ENSONIG00000003862)	cep290 (ENSONIG00000003865)	TMTC3 (ENSONIG00000003870)	ENSONIG00000035661	kitlg (ENSONIG00000003874)	ENSONIG00000003875	dusp6 (ENSONIG00000003881)	poc1b (ENSONIG00000003884)	cep41 (ENSONIG00000003885)	cpa1 (ENSONIG00000003887)	tes (ENSONIG00000033114) #21	cav2 (ENSONIG00000036466) #22	cav1 (ENSONIG00000029264) ##22	met (ENSONIG00000003898) #25	CAPZA2 (ENSONIG00000003901)	st7 (ENSONIG00000003903)	wnt2 (ENSONIG00000042505)	asz1 (ENSONIG00000003909)	cftr (ENSONIG00000003911)	ENSONIG00000030619	CTTNBP2 (ENSONIG00000003915)	ENSONIG00000003919	ENSONIG00000003924	GRAMD4 (ENSONIG00000003927)	ENSONIG00000037220	drd4a (ENSONIG00000003934)	deaf1 (ENSONIG00000003936)
Tiger tail seahorse	MODERN SPECIES	446	MGAT4C (ENSHCOG00000016409)	eif4g2b (ENSHCOG00000016406)	ENSHCOG00000000825	zgc:103499 (ENSHCOG00000016362)	ENSHCOG00000016352	ENSHCOG00000016292	TMTC3 (ENSHCOG00000016258)	kitlga (ENSHCOG00000016218)	ENSHCOG00000016191	DUSP6 (ENSHCOG00000016169)	poc1b (ENSHCOG00000016146)	ENSHCOG00000016087	ENSHCOG00000016070	cpa1 (ENSHCOG00000016060)	tes (ENSHCOG00000016055) #21	cav2 (ENSHCOG00000016026) #22	cav1 (ENSHCOG00000000452) ##22	met (ENSHCOG00000016015) #25	ENSHCOG00000000450	st7 (ENSHCOG00000015979)	ENSHCOG00000015945	cftr (ENSHCOG00000015934)	ENSHCOG00000015882	asz1 (ENSHCOG00000000444)	wnt2 (ENSHCOG00000015861)	CNOT4 (ENSHCOG00000015815)	zgc:136858 (ENSHCOG00000015773)	ENSHCOG00000015709	ENSHCOG00000015702	ENSHCOG00000015660	ENSHCOG00000015652
Pinecone sodierfish	MODERN SPECIES	20	cpa4 (ENSMMDG00005010518)	ENSMMDG00005010201	cep290 (ENSMMDG00005009030)	TMTC3 (ENSMMDG00005008948)	kitlga (ENSMMDG00005008937)	ENSMMDG00005008933	ENSMMDG00005008929	dusp6 (ENSMMDG00005008921)	POC1B (ENSMMDG00005008449)	ENSMMDG00005008430	cep41 (ENSMMDG00005008426)	ENSMMDG00005008424	ENSMMDG00005008422	cpa1 (ENSMMDG00005008420)	tes (ENSMMDG00005008417) #21	cav2 (ENSMMDG00005008416) #22	cav1 (ENSMMDG00005008366) ##22	met (ENSMMDG00005007743) #25	ENSMMDG00005005470	st7 (ENSMMDG00005005144)	wnt2 (ENSMMDG00005005089)	ENSMMDG00005005082	asz1 (ENSMMDG00005005071)	cftr (ENSMMDG00005004817)	CTTNBP2 (ENSMMDG00005004768)	ENSMMDG00005004122	ENSMMDG00005004020	ENSMMDG00005004008	nup160 (ENSMMDG00005020277)	frs2b (ENSMMDG00005020201)	PTPRB (ENSMMDG00005020188)
Cod	MODERN SPECIES	22	ENSGMOG00000029881	ENSGMOG00000000661	ENSGMOG00000036427	ENSGMOG00000007043	ENSGMOG00000035978	ENSGMOG00000024835	ENSGMOG00000025801	ENSGMOG00000030939	ENSGMOG00000030268	ENSGMOG00000033438	ENSGMOG00000033070	ENSGMOG00000018928	ENSGMOG00000006386	cpa1 (ENSGMOG00000006412)	tes (ENSGMOG00000024389) #21	cav2 (ENSGMOG00000011408) #22	cav1 (ENSGMOG00000027424) ##22	met (ENSGMOG00000008433) #25	ENSGMOG00000013681	ST7 (ENSGMOG00000014821)	wnt2 (ENSGMOG00000030449)	ENSGMOG00000028057	asz1 (ENSGMOG00000002932)	cftr (ENSGMOG00000002861)	ENSGMOG00000004544	ENSGMOG00000004697	ENSGMOG00000004676	ENSGMOG00000032154	ENSGMOG00000004527	ENSGMOG00000004618	ENSGMOG00000034783
Protacanthopterygii	ANCESTRAL SPECIES	29	ENSGT00640000091574	ENSGT00940000155352.eb	ENSGT00940000154675.w.b	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f.c.a	ENSGT00390000018272.i	ENSGT00950000182953.B.b	ENSGT00940000158342.b	ENSGT00950000185287	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b	ENSGT00940000155993 #21	ENSGT00950000183006.A.b #22	ENSGT00950000183006.B.f.a ##22	ENSGT00940000158022 #25	ENSGT00950000183119.b	ENSGT00390000000873.a.b	ENSGT00940000159231	ENSGT00880000138051.a	ENSGT00940000158567	ENSGT00940000158293	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972	ENSGT00940000157033.h	ENSGT00940000156088.c.b	ENSGT00940000168658	ENSGT00390000011055	ENSGT00940000158153.a.i
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	457											ENSGT00940000157538.f.c.b	ENSGT00390000018272.i.a	ENSGT00940000158342.b.h	ENSGT00940000158082.b.j.a	ENSGT00940000155993.j #21	ENSGT00950000183006.A.b.k.a #22	ENSGT00950000183006.B.f.a.h ##22	ENSGT00940000158022.n #25	ENSGT00950000183119.b.h	ENSGT00390000000873.a.b.g	ENSGT00940000159231.d	ENSGT00880000138051.a.f	ENSGT00940000158567.e	ENSGT00940000158293.lb	ENSGT00390000000972.e	ENSGT00940000157033.h.g	ENSGT00940000156088.c.b.g	ENSGT00390000001116.h	ENSGT00940000156429.t.a	ENSGT00940000159100.h.i	ENSGT00940000159496.l.i
Salmoninae_a	ANCESTRAL SPECIES	83	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00640000091574.e	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.d	ENSGT00390000018272.i.a	ENSGT00940000158342.b.h	ENSGT00940000158082.b.j.a	ENSGT00940000155993.j #21	ENSGT00950000183006.A.b.k.a #22	ENSGT00950000183006.B.f.a.h ##22	ENSGT00940000158022.n #25	ENSGT00950000183119.b.h	ENSGT00390000000873.a.b.g	ENSGT00940000159231.d	ENSGT00880000138051.a.f	ENSGT00940000158567.e	ENSGT00940000158293.lb	ENSGT00390000000972.e	ENSGT00940000157033.h.g	ENSGT00940000156088.c.b.g	ENSGT00390000001116.h	ENSGT00940000156429.t.a	ENSGT00940000159100.h.i	ENSGT00940000159496.l.i
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00640000091574.e	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.c.b	ENSGT00390000018272.i.a	ENSGT00940000158342.b.h	ENSGT00940000158082.b.j.a	ENSGT00940000155993.j #21	ENSGT00950000183006.A.b.k.a #22	ENSGT00950000183006.B.f.a.h ##22	ENSGT00940000158022.n #25	ENSGT00950000183119.b.h	ENSGT00390000000873.a.b.g	ENSGT00940000159231.d	ENSGT00880000138051.a.f	ENSGT00940000158567.e	ENSGT00940000158293.lb	ENSGT00390000000972.e	ENSGT00940000157033.h.g	ENSGT00940000156088.c.b.g	ENSGT00390000001116.h	ENSGT00940000156429.t.a	ENSGT00940000159100.h.i	ENSGT00940000159496.l.i
Rainbow trout	MODERN SPECIES		SLC6A15 (ENSOMYG00000023224)	ENSOMYG00000023183	ENSOMYG00000019783	MGAT4C (ENSOMYG00000023164)	ENSOMYG00000022959	TMTC3 (ENSOMYG00000022831)	ENSOMYG00000022824	ENSOMYG00000068095	kitlg (ENSOMYG00000022790)	ENSOMYG00000057441	ENSOMYG00000064706	dusp6 (ENSOMYG00000022762)	ENSOMYG00000057582	cbpa1 (ENSOMYG00000022655)	tes (ENSOMYG00000022584) #21	cav2 (ENSOMYG00000022558) #22	ENSOMYG00000063905	cav1 (ENSOMYG00000076363) ##22	met (ENSOMYG00000022348) #25	ENSOMYG00000022253	ENSOMYG00000054873	ST7 (ENSOMYG00000021810)	wnt2 (ENSOMYG00000021713)	asz1 (ENSOMYG00000021664)	ENSOMYG00000073421	cftr (ENSOMYG00000020983)	ENSOMYG00000020700	ENSOMYG00000020618	ENSOMYG00000020576	ENSOMYG00000020357	ENSOMYG00000020203
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00640000091574.e	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.c.b	ENSGT00390000018272.i.a	ENSGT00940000158342.b.h	ENSGT00940000158082.b.j.a	ENSGT00940000155993.j #21	ENSGT00950000183006.A.b.k.a #22	ENSGT00950000183006.B.f.a.h ##22	ENSGT00940000158022.n #25	ENSGT00950000183119.b.h	ENSGT00390000000873.a.b.g	ENSGT00940000159231.d	ENSGT00880000138051.a.f	ENSGT00940000158567.e	ENSGT00940000158293.lb	ENSGT00390000000972.e	ENSGT00940000157033.h.g	ENSGT00940000156088.c.b.g	ENSGT00390000001116.h	ENSGT00940000156429.t.a	ENSGT00940000159100.h.i	ENSGT00940000159496.l.i
Coho salmon	MODERN SPECIES	24	MGAT4C (ENSOKIG00005021429)	ENSOKIG00005021399	ENSOKIG00005021363	ENSOKIG00005018544	SLC6A15 (ENSOKIG00005018163)	alx1 (ENSOKIG00005018144)	NTS (ENSOKIG00005018123)	MGAT4C (ENSOKIG00005018111)	eif4g2b (ENSOKIG00005017316)	TMTC3 (ENSOKIG00005017265)	kitlga (ENSOKIG00005017253)	dusp6 (ENSOKIG00005017241)	CPA1 (ENSOKIG00005017166)	tes (ENSOKIG00005017143) #21	ENSOKIG00005017134	cav2 (ENSOKIG00005017132) #22	cav1 (ENSOKIG00005017117) ##22	met (ENSOKIG00005016627) #25	ENSOKIG00005016563	ST7 (ENSOKIG00005015517)	wnt2 (ENSOKIG00005015447)	cftr (ENSOKIG00005015381)	CTTNBP2 (ENSOKIG00005015326)	nup160 (ENSOKIG00005015245)	frs2b (ENSOKIG00005015212)	PTPRB (ENSOKIG00005014685)	ZFC3H1 (ENSOKIG00005014581)	TBC1D15 (ENSOKIG00005011765)	CHST8 (ENSOKIG00005011466)	KCTD15 (ENSOKIG00005011433)	ENSOKIG00005011406
Chinook salmon	MODERN SPECIES	30	ENSOTSG00005039718	ENSOTSG00005039711	ENSOTSG00005037454	SLC6A15 (ENSOTSG00005037409)	alx1 (ENSOTSG00005037407)	ENSOTSG00005037405	ENSOTSG00005037403	MGAT4C (ENSOTSG00005037401)	eif4g2b (ENSOTSG00005037361)	TMTC3 (ENSOTSG00005037355)	kitlga (ENSOTSG00005037354)	dusp6 (ENSOTSG00005037352)	CPA1 (ENSOTSG00005037351)	CPA1 (ENSOTSG00005037052)	tes (ENSOTSG00005036658) #21	cav2 (ENSOTSG00005036646) #22	ENSOTSG00005036644	cav1 (ENSOTSG00005036643) ##22	met (ENSOTSG00005035985) #25	ENSOTSG00005035972	ST7 (ENSOTSG00005030603)	wnt2 (ENSOTSG00005030570)	asz1 (ENSOTSG00005030569)	cftr (ENSOTSG00005029858)	CTTNBP2 (ENSOTSG00005029843)	nup160 (ENSOTSG00005029842)	frs2b (ENSOTSG00005029839)	PTPRB (ENSOTSG00005029780)	ZFC3H1 (ENSOTSG00005029775)	tbc1d15 (ENSOTSG00005029358)	ENSOTSG00005029352
Salmo	ANCESTRAL SPECIES	65	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00940000177577.a	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.d	ENSGT00390000018272.i.a	ENSGT00940000158342.b.h	ENSGT00940000158082.b.j.a	ENSGT00940000155993.j #21	ENSGT00950000183006.A.b.k.a #22	ENSGT00950000183006.B.f.a.h ##22	ENSGT00940000158022.n #25	ENSGT00950000183119.b.h	ENSGT00390000000873.a.b.g	ENSGT00940000159231.d	ENSGT00880000138051.a.f	ENSGT00940000158567.e	ENSGT00940000158293.lb	ENSGT00390000000972.e	ENSGT00940000157033.h.g	ENSGT00940000156088.c.b.g	ENSGT00390000001116.h	ENSGT00940000156429.t.a	ENSGT00940000159100.h.i	ENSGT00940000159496.l.i
River trout	MODERN SPECIES	8	ENSSTUG00000027177	ENSSTUG00000027005	ENSSTUG00000022647	ENSSTUG00000022377	alx1 (ENSSTUG00000022363)	ENSSTUG00000022355	MGAT4C (ENSSTUG00000022345)	ENSSTUG00000022339	eif4g2b (ENSSTUG00000021398)	ENSSTUG00000021355	kitlga (ENSSTUG00000021340)	dusp6 (ENSSTUG00000021304)	ENSSTUG00000021293	CPA1 (ENSSTUG00000021190)	tes (ENSSTUG00000021175) #21	cav2 (ENSSTUG00000021168) #22	cav1 (ENSSTUG00000021150) ##22	met (ENSSTUG00000020733) #25	ENSSTUG00000020591	ST7 (ENSSTUG00000017299)	wnt2 (ENSSTUG00000017200)	asz1 (ENSSTUG00000017165)	cftr (ENSSTUG00000008374)	CTTNBP2 (ENSSTUG00000008192)	nup160 (ENSSTUG00000008048)	frs2b (ENSSTUG00000008038)	PTPRB (ENSSTUG00000007393)	ZFC3H1 (ENSSTUG00000007266)	tbc1d15 (ENSSTUG00000005227)	CHST8 (ENSSTUG00000005152)	kctd15a (ENSSTUG00000005136)
Huchen	MODERN SPECIES	154										ENSHHUG00000048037	kitlga (ENSHHUG00000048039)	dusp6 (ENSHHUG00000048043)	CPA1 (ENSHHUG00000048046)	ENSHHUG00000048096	tes (ENSHHUG00000048100) #21	cav2 (ENSHHUG00000048103) #22	cav1 (ENSHHUG00000048105) ##22	met (ENSHHUG00000048112) #25	ENSHHUG00000048168	ST7 (ENSHHUG00000048270)	wnt2 (ENSHHUG00000048394)	ENSHHUG00000048396	cftr (ENSHHUG00000048407)	ENSHHUG00000048634	ENSHHUG00000048646
Salmoninae	ANCESTRAL SPECIES	91	ENSGT00940000154675.w.b.d	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f.c.a	ENSGT00390000018272.i.b	ENSGT00950000182953.B.b.c.a	ENSGT00950000182953.B.b.d	ENSGT00940000158342.b.g	ENSGT00950000185287	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.i.b	ENSGT00940000158082.b.i.a	ENSGT00940000155993.i #21	ENSGT00950000183006.A.b.k.b #22	ENSGT00950000183006.B.f.a.g ##22	ENSGT00940000158022.m #25	ENSGT00950000183119.b.g	ENSGT00390000000873.a.b.h	ENSGT00940000159231.c	ENSGT00880000138051.a.e	ENSGT00940000158567.f	ENSGT00940000158293.mb	ENSGT00940000163716.c.a.a.a	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972.f	ENSGT00940000157033.h.h	ENSGT00940000156088.c.b.h	ENSGT00940000168658	ENSGT00390000011055
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00640000091574.f	ENSGT00940000155352.eb.a.a	ENSGT00940000154675.w.b.d	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f.c.a	ENSGT00390000018272.i.b	ENSGT00950000182953.B.b.c.a	ENSGT00940000158342.b.g	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.i.b	ENSGT00940000158082.b.i.a	ENSGT00940000155993.i #21	ENSGT00950000183006.A.b.k.b #22	ENSGT00950000183006.B.f.a.g ##22	ENSGT00940000158022.m #25	ENSGT00950000183119.b.g	ENSGT00390000000873.a.b.h	ENSGT00940000159231.c	ENSGT00880000138051.a.e	ENSGT00940000158567.f	ENSGT00940000158293.mb	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972.f	ENSGT00940000157033.h.h	ENSGT00940000156088.c.b.h	ENSGT00950000183039.A.d	ENSGT00940000156088.c.a.c.a	ENSGT00940000157212.B.i
Salmo	ANCESTRAL SPECIES	45	ENSGT00640000091574.f	ENSGT00940000155352.eb.a.a	ENSGT00940000154675.w.b.d	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f.c.a	ENSGT00390000018272.i.b	ENSGT00950000182953.B.b.d	ENSGT00940000158342.b.g	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.i.b	ENSGT00940000158082.b.i.a	ENSGT00940000155993.i #21	ENSGT00950000183006.A.b.k.b #22	ENSGT00950000183006.B.f.a.g ##22	ENSGT00940000158022.m #25	ENSGT00950000183119.b.g	ENSGT00390000000873.a.b.h	ENSGT00940000159231.c	ENSGT00880000138051.a.e	ENSGT00940000158567.f	ENSGT00940000158293.mb	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972.f	ENSGT00940000157033.h.h	ENSGT00940000156088.c.b.h	ENSGT00940000168658.h	ENSGT00940000158153.a.i.a	ENSGT00940000160214
River trout	MODERN SPECIES	37	ENSSTUG00000048957	eif4g2b (ENSSTUG00000048905)	ENSSTUG00000048895	zgc:103499 (ENSSTUG00000048894)	cep290 (ENSSTUG00000048383)	TMTC3 (ENSSTUG00000048230)	kitlga (ENSSTUG00000048218)	ENSSTUG00000048210	ENSSTUG00000048193	dusp6 (ENSSTUG00000048187)	POC1B (ENSSTUG00000048166)	cep41 (ENSSTUG00000048133)	CPA1 (ENSSTUG00000047859)	CPA1 (ENSSTUG00000047737)	tes (ENSSTUG00000047722) #21	cav2 (ENSSTUG00000047719) #22	cav1 (ENSSTUG00000047718) ##22	met (ENSSTUG00000047649) #25	ENSSTUG00000047387	ST7 (ENSSTUG00000047198)	wnt2 (ENSSTUG00000047173)	asz1 (ENSSTUG00000047158)	cftr (ENSSTUG00000038250)	ENSSTUG00000037959	ENSSTUG00000037941	nup160 (ENSSTUG00000037360)	frs2b (ENSSTUG00000037324)	PTPRB (ENSSTUG00000035321)	ENSSTUG00000035212	ZFC3H1 (ENSSTUG00000035135)	ENSSTUG00000035125
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000096466	eif4g2b (ENSSSAG00000005490)	ENSSSAG00000093275	ENSSSAG00000005461	zgc:103499 (ENSSSAG00000114806)	cep290 (ENSSSAG00000004548)	TMTC3 (ENSSSAG00000004370)	kitlga (ENSSSAG00000004331)	ENSSSAG00000004274	dusp6 (ENSSSAG00000004251)	POC1B (ENSSSAG00000004082)	cep41 (ENSSSAG00000004034)	ENSSSAG00000115491	ENSSSAG00000003960	tes (ENSSSAG00000108191) #21	cav2 (ENSSSAG00000110681) #22	cav1 (ENSSSAG00000091622) ##22	ENSSSAG00000105868	met (ENSSSAG00000071586) #25	ENSSSAG00000070500	ST7 (ENSSSAG00000070109)	wnt2 (ENSSSAG00000070070)	asz1 (ENSSSAG00000070062)	cftr (ENSSSAG00000068465)	ENSSSAG00000068414	ENSSSAG00000068410	ENSSSAG00000067254	ENSSSAG00000067217	ENSSSAG00000065309	ENSSSAG00000065163	ENSSSAG00000107405
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00950000182839.A.c	ENSGT00640000091574.f	ENSGT00940000155352.eb.a.a	ENSGT00940000154675.w.b.d	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f.c.a	ENSGT00390000018272.i.b	ENSGT00950000182953.B.b.c.a	ENSGT00940000158342.b.g	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.i.b	ENSGT00940000155993.i #21	ENSGT00950000183006.A.b.k.b #22	ENSGT00950000183006.B.f.a.g ##22	ENSGT00940000158022.m #25	ENSGT00950000183119.b.g	ENSGT00390000000873.a.b.h	ENSGT00940000159231.c	ENSGT00880000138051.a.e	ENSGT00940000158567.f	ENSGT00940000158293.mb	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972.f	ENSGT00940000157033.h.h	ENSGT00940000156088.c.b.h	ENSGT00390000001285.i.c.a	ENSGT00950000183039.A.c	ENSGT00940000156088.c.a.c.a
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00640000091574.f	ENSGT00940000155352.eb.a.a	ENSGT00940000154675.w.b.d	ENSGT00530000063822.a.b.a	ENSGT00500000044938	ENSGT00730000111039.C	ENSGT00940000157538.f.c.a	ENSGT00390000018272.i.b	ENSGT00950000182953.B.b.c.a	ENSGT00940000158342.b.g	ENSGT00940000160413	ENSGT00390000002222	ENSGT00940000158082.b.i.b	ENSGT00940000158082.b.i.a	ENSGT00940000155993.i #21	ENSGT00950000183006.A.b.k.b #22	ENSGT00950000183006.B.f.a.g ##22	ENSGT00940000158022.m #25	ENSGT00950000183119.b.g	ENSGT00390000000873.a.b.h	ENSGT00940000159231.c	ENSGT00880000138051.a.e	ENSGT00940000158567.f	ENSGT00940000158293.mb	ENSGT00940000161051.a.a.b.b.b.b	ENSGT00390000000972.f	ENSGT00940000157033.h.h	ENSGT00940000156088.c.b.h	ENSGT00940000160214	ENSGT00390000001116.g	ENSGT00940000156429.t.b
Coho salmon	MODERN SPECIES	14	ENSOKIG00005050380	ENSOKIG00005050379	eif4g2b (ENSOKIG00005050279)	ENSOKIG00005050246	zgc:103499 (ENSOKIG00005050244)	cep290 (ENSOKIG00005050162)	TMTC3 (ENSOKIG00005050096)	kitlga (ENSOKIG00005050082)	ENSOKIG00005050078	ENSOKIG00005050074	dusp6 (ENSOKIG00005050069)	POC1B (ENSOKIG00005050029)	cep41 (ENSOKIG00005050016)	CPA1 (ENSOKIG00005049921)	tes (ENSOKIG00005049903) #21	cav2 (ENSOKIG00005049896) #22	cav1 (ENSOKIG00005049894) ##22	met (ENSOKIG00005049721) #25	ENSOKIG00005049646	ST7 (ENSOKIG00005049458)	wnt2 (ENSOKIG00005049410)	asz1 (ENSOKIG00005049403)	cftr (ENSOKIG00005047693)	ENSOKIG00005047421	ENSOKIG00005047414	NUP160 (ENSOKIG00005047276)	FRS2 (ENSOKIG00005047219)	PTPRB (ENSOKIG00005046641)	ENSOKIG00005046559	ENSOKIG00005046523	tbc1d15 (ENSOKIG00005045662)
Chinook salmon	MODERN SPECIES	10	RASSF9 (ENSOTSG00005021702)	ENSOTSG00005021700	MGAT4C (ENSOTSG00005021698)	eif4g2b (ENSOTSG00005021472)	ENSOTSG00005021462	zgc:103499 (ENSOTSG00005021459)	cep290 (ENSOTSG00005019359)	TMTC3 (ENSOTSG00005019341)	kitlga (ENSOTSG00005019340)	ENSOTSG00005018923	dusp6 (ENSOTSG00005018906)	POC1B (ENSOTSG00005017836)	cep41 (ENSOTSG00005017833)	CPA1 (ENSOTSG00005017819)	tes (ENSOTSG00005017767) #21	cav2 (ENSOTSG00005017764) #22	cav1 (ENSOTSG00005017762) ##22	met (ENSOTSG00005017760) #25	ENSOTSG00005017752	ST7 (ENSOTSG00005017200)	wnt2 (ENSOTSG00005017194)	asz1 (ENSOTSG00005017193)	cftr (ENSOTSG00005011712)	ENSOTSG00005011695	ENSOTSG00005011694	ENSOTSG00005011693	frs2b (ENSOTSG00005011691)	PTPRB (ENSOTSG00005008974)	LGR5 (ENSOTSG00005008966)	ENSOTSG00005008963	tbc1d15 (ENSOTSG00005006836)
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000068327	MGAT4C (ENSOMYG00000019770)	eif4g2b (ENSOMYG00000019277)	ENSOMYG00000019008	zgc:103499 (ENSOMYG00000018996)	cep290 (ENSOMYG00000018312)	TMTC3 (ENSOMYG00000018159)	kitlga (ENSOMYG00000018267)	ENSOMYG00000018087	ENSOMYG00000055137	dusp6 (ENSOMYG00000018072)	POC1B (ENSOMYG00000017921)	cep41 (ENSOMYG00000017873)	ENSOMYG00000017273	tes (ENSOMYG00000053292) #21	cav2 (ENSOMYG00000017234) #22	cav1 (ENSOMYG00000017218) ##22	ENSOMYG00000076743	met (ENSOMYG00000017070) #25	ENSOMYG00000016879	ENSOMYG00000050509	ST7 (ENSOMYG00000016087)	wnt2 (ENSOMYG00000016055)	asz1 (ENSOMYG00000016047)	ENSOMYG00000075285	ENSOMYG00000051537	cftr (ENSOMYG00000012997)	ENSOMYG00000071446	ENSOMYG00000012710	ENSOMYG00000012696	ENSOMYG00000012677
Salmoninae	ANCESTRAL SPECIES	2187																ENSGT00950000183006.A.b.l #22	ENSGT00950000186283
Huchen	MODERN SPECIES	3120																cav2 (ENSHHUG00000031177) #22	ENSHHUG00000031179	met (ENSHHUG00000031182) #25
Northern pike	MODERN SPECIES	18	MGAT4C (ENSELUG00000010737)	eif4g2b (ENSELUG00000011497)	ENSELUG00000011520	zgc:103499 (ENSELUG00000011573)	cep290 (ENSELUG00000011767)	TMTC3 (ENSELUG00000011884)	kitlga (ENSELUG00000011931)	ENSELUG00000011965	dusp6 (ENSELUG00000011976)	POC1B (ENSELUG00000012019)	cep41 (ENSELUG00000012074)	CPA1 (ENSELUG00000001122)	CPA1 (ENSELUG00000012299)	tes (ENSELUG00000012353) #21	ENSELUG00000025944	cav2 (ENSELUG00000012361) #22	cav1 (ENSELUG00000012388) ##22	met (ENSELUG00000012486) #25	ENSELUG00000012526	st7 (ENSELUG00000012565)	wnt2 (ENSELUG00000012577)	asz1 (ENSELUG00000012633)	cftr (ENSELUG00000012690)	CTTNBP2 (ENSELUG00000012767)	ENSELUG00000012927	nup160 (ENSELUG00000012999)	frs2b (ENSELUG00000025743)	PTPRB (ENSELUG00000013246)	ENSELUG00000013304	LGR5 (ENSELUG00000013350)	ENSELUG00000013421
Spotted gar	MODERN SPECIES	674	mkln1 (ENSLOCG00000015642)	ENSLOCG00000015641	plxna4 (ENSLOCG00000015635)	chchd3a (ENSLOCG00000015634)	exoc4 (ENSLOCG00000015631)	LRGUK (ENSLOCG00000015628)	slc35b4 (ENSLOCG00000015627)	ENSLOCG00000015617	ucn3l (ENSLOCG00000017902)	copg2 (ENSLOCG00000015612)	mest (ENSLOCG00000015610)	cep41 (ENSLOCG00000015609)	cpa1 (ENSLOCG00000015607)	ENSLOCG00000015604	tes (ENSLOCG00000015603) #21	cav2 (ENSLOCG00000015600) #22	cav1 (ENSLOCG00000015597) ##22	met (ENSLOCG00000015595) #25	ENSLOCG00000015593	st7 (ENSLOCG00000015591)	wnt2 (ENSLOCG00000015590)	asz1 (ENSLOCG00000015587)	cftr (ENSLOCG00000015585)	CTTNBP2 (ENSLOCG00000015582)	lsm8 (ENSLOCG00000015580)	ANKRD26 (ENSLOCG00000015575)	atp6v1f (ENSLOCG00000015574)	ATP6V1FNB (ENSLOCG00000015573)	ENSLOCG00000015570	KCP (ENSLOCG00000015566)	ENSLOCG00000015564
Reedfish	MODERN SPECIES		ENSECRG00000010571	ENSECRG00000010590	chchd3a (ENSECRG00000010595)	ENSECRG00000010604	exoc4 (ENSECRG00000010616)	slc35b4 (ENSECRG00000010651)	ENSECRG00000010662	ENSECRG00000010669	ucn3l (ENSECRG00000010676)	copg2 (ENSECRG00000010685)	mest (ENSECRG00000010706)	cep41 (ENSECRG00000010718)	CPA1 (ENSECRG00000010734)	CPA1 (ENSECRG00000010751)	tes (ENSECRG00000010759) #21	cav2 (ENSECRG00000010766) #22	cav1 (ENSECRG00000010774) ##22	met (ENSECRG00000010782) #25	ENSECRG00000010798	st7 (ENSECRG00000010843)	wnt2 (ENSECRG00000010952)	asz1 (ENSECRG00000010962)	cftr (ENSECRG00000011130)	ENSECRG00000013120	ENSECRG00000013151	lsm8 (ENSECRG00000013166)	ENSECRG00000013191	ENSECRG00000013243	atp6v1f (ENSECRG00000013258)	ENSECRG00000013280	ENSECRG00000013312