Amniota	ANCESTRAL SPECIES	10	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00940000165908	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946
Mammalia	ANCESTRAL SPECIES	34	ENSGT00940000153335.a.b	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b	ENSGT00940000162142	ENSGT00940000154696	ENSGT00950000182946
Theria	ANCESTRAL SPECIES	21	ENSGT00940000153335.a.b	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b	ENSGT00940000162142
Eutheria	ANCESTRAL SPECIES	13	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Glires	ANCESTRAL SPECIES	16	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Rodentia	ANCESTRAL SPECIES	16	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001013276 #7	Pdcd1lg2 (ENSCGRG00001015183) #8	Ric1 (ENSCGRG00001016728) #9	Ermp1 (ENSCGRG00001021468) #10	Mlana (ENSCGRG00001024579) #11	9930021J03Rik (ENSCGRG00001008137) #12	Ranbp6 (ENSCGRG00001012447) #13	Il33 (ENSCGRG00001014000) #14	Trpd52l3 (ENSCGRG00001011832) #15	Uhrf2 (ENSCGRG00001019677) #16	Gldc (ENSCGRG00001023952) #17	Mbl2 (ENSCGRG00001015670) #18	Dkk1 (ENSCGRG00001016431) #19	Prkg1 (ENSCGRG00001023225) #20	Cstf2t (ENSCGRG00001003222) #21	A1cf (ENSCGRG00001017413) #22	Asah2 (ENSCGRG00001023129) #23	Sgms1 (ENSCGRG00001010915) #24	Scd3 (ENSCGRG00001011818) #25	ENSCGRG00001018646 #26	Scd2 (ENSCGRG00001023207) #27	Cpeb3 (ENSCGRG00001003846) #28	Marchf5 (ENSCGRG00001018647) #29	Ide (ENSCGRG00001020448) #30
Golden Hamster	MODERN SPECIES	617	Pdcd1lg2 (ENSMAUG00000007055) #8	Ric1 (ENSMAUG00000008752) #9	Ermp1 (ENSMAUG00000008682) #10	Mlana (ENSMAUG00000006750) #11	9930021J03Rik (ENSMAUG00000009640) #12	Ranbp6 (ENSMAUG00000002166) #13	ENSMAUG00000010025 #14	Uhrf2 (ENSMAUG00000008237) #16	Gldc (ENSMAUG00000009429) #17	Mbl2 (ENSMAUG00000007553) #18	ENSMAUG00000001472	Dkk1 (ENSMAUG00000006065) #19	Prkg1 (ENSMAUG00000009610) #20	Cstf2t (ENSMAUG00000006359) #21	ENSMAUG00000008589	A1cf (ENSMAUG00000007422) #22	Asah2 (ENSMAUG00000010836) #23	Sgms1 (ENSMAUG00000006208) #24	Minpp1 (ENSMAUG00000009515)	Papss2 (ENSMAUG00000007484)	ENSMAUG00000007578	ENSMAUG00000006159	Rnls (ENSMAUG00000006476)	ENSMAUG00000004988	Lipf (ENSMAUG00000006602)	Lipk (ENSMAUG00000008826)	Lipn (ENSMAUG00000009129)	Lipm (ENSMAUG00000006798)	Ankrd22 (ENSMAUG00000005961)	ENSMAUG00000004326	Acta2 (ENSMAUG00000007124)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Prairie vole	MODERN SPECIES	16	Cd274 (ENSMOCG00000016738)	Pdcd1lg2 (ENSMOCG00000002927) #8	Ric1 (ENSMOCG00000018339) #9	ENSMOCG00000019292 #10	Mlana (ENSMOCG00000005161) #11	9930021J03Rik (ENSMOCG00000020946) #12	Ranbp6 (ENSMOCG00000010374) #13	Il33 (ENSMOCG00000012740) #14	Uhrf2 (ENSMOCG00000000695) #16	Gldc (ENSMOCG00000010831) #17	Mbl2 (ENSMOCG00000022089) #18	ENSMOCG00000000632	Dkk1 (ENSMOCG00000003507) #19	Prkg1 (ENSMOCG00000008936) #20	Cstf2t (ENSMOCG00000020428) #21	A1cf (ENSMOCG00000021536) #22	Asah2 (ENSMOCG00000003980) #23	Sgms1 (ENSMOCG00000021620) #24	Minpp1 (ENSMOCG00000003112)	ENSMOCG00000001064	Papss2 (ENSMOCG00000001274)	Atad1 (ENSMOCG00000013771)	ENSMOCG00000002138	ENSMOCG00000002723	Rnls (ENSMOCG00000004956)	Lipf (ENSMOCG00000013237)	Lipk (ENSMOCG00000015423)	Lipn (ENSMOCG00000021083)	Lipm (ENSMOCG00000012585)	Ankrd22 (ENSMOCG00000022828)	Stambpl1 (ENSMOCG00000003028)
Northern American deer mouse	MODERN SPECIES		Pdcd1lg2 (ENSPEMG00000021972) #8	Ric1 (ENSPEMG00000022073) #9	Ermp1 (ENSPEMG00000022988) #10	Mlana (ENSPEMG00000004309) #11	9930021J03Rik (ENSPEMG00000008620) #12	Ranbp6 (ENSPEMG00000013745) #13	Il33 (ENSPEMG00000010337) #14	ENSPEMG00000013576	Trpd52l3 (ENSPEMG00000025350) #15	Uhrf2 (ENSPEMG00000007148) #16	Gldc (ENSPEMG00000009200) #17	ENSPEMG00000024624 #17	ENSPEMG00000028403 #18	Dkk1 (ENSPEMG00000025142) #19	Prkg1 (ENSPEMG00000031063) #20	A1cf (ENSPEMG00000015021) #22	Asah2 (ENSPEMG00000012455) #23	Sgms1 (ENSPEMG00000024113) #24	Minpp1 (ENSPEMG00000022911)	Lipo1 (ENSPEMG00000008709)	ENSPEMG00000028099	ENSPEMG00000028512	Lipf (ENSPEMG00000010733)	Lipk (ENSPEMG00000008965)	Lipn (ENSPEMG00000018314)	Lipm (ENSPEMG00000020501)	Ankrd22 (ENSPEMG00000017012)	Stambpl1 (ENSPEMG00000005840)	Acta2 (ENSPEMG00000000128)	Fas (ENSPEMG00000000158)	Ch25h (ENSPEMG00000014530)
Murinae	ANCESTRAL SPECIES		ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Mus	ANCESTRAL SPECIES		ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000161430	ENSGT00940000161373 #8	ENSGT00390000002955 #9	ENSGT00530000063839 #10	ENSGT00390000009531 #11	ENSGT00390000011483 #12	ENSGT00940000162767 #13	ENSGT00390000005185 #14	ENSGT00940000163110 #15	ENSGT00390000008296.b.a.a #16	ENSGT00390000017970 #17	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031.f.a.a	ENSGT00940000161066	ENSGT00940000160031.g	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
spretus	MODERN SPECIES	10	Pdcd1lg2 (MGP_SPRETEiJ_G0023777) #8	Ric1 (MGP_SPRETEiJ_G0023778) #9	Ermp1 (MGP_SPRETEiJ_G0023779) #10	Mlana (MGP_SPRETEiJ_G0023780) #11	9930021J03Rik (MGP_SPRETEiJ_G0023781) #12	Ranbp6 (MGP_SPRETEiJ_G0023782) #13	Il33 (MGP_SPRETEiJ_G0023783) #14	Trpd52l3 (MGP_SPRETEiJ_G0023784) #15	Uhrf2 (MGP_SPRETEiJ_G0023785) #16	Gldc (MGP_SPRETEiJ_G0023786) #17	Mbl2 (MGP_SPRETEiJ_G0023787) #18	Dkk1 (MGP_SPRETEiJ_G0023788) #19	Prkg1 (MGP_SPRETEiJ_G0023789) #20	Cstf2t (MGP_SPRETEiJ_G0023790) #21	MGP_SPRETEiJ_G0023791 #20	A1cf (MGP_SPRETEiJ_G0023792) #22	Asah2 (MGP_SPRETEiJ_G0023793) #23	Sgms1 (MGP_SPRETEiJ_G0023794) #24	Minpp1 (MGP_SPRETEiJ_G0023795)	Papss2 (MGP_SPRETEiJ_G0023796)	Atad1 (MGP_SPRETEiJ_G0023797)	MGP_SPRETEiJ_G0023798	Rnls (MGP_SPRETEiJ_G0023799)	Lipo1 (MGP_SPRETEiJ_G0023800)	Lipf (MGP_SPRETEiJ_G0023802)	Lipk (MGP_SPRETEiJ_G0023803)	Lipn (MGP_SPRETEiJ_G0023804)	Lipm (MGP_SPRETEiJ_G0023805)	Ankrd22 (MGP_SPRETEiJ_G0023806)	Stambpl1 (MGP_SPRETEiJ_G0023807)	Acta2 (MGP_SPRETEiJ_G0023808)
Steppe mouse	MODERN SPECIES	3342	Pdcd1lg2 (ENSMSIG00000025335) #8	Ric1 (ENSMSIG00000025350) #9	Ermp1 (ENSMSIG00000025448) #10	Mlana (ENSMSIG00000025512) #11	9930021J03Rik (ENSMSIG00000025540) #12	Ranbp6 (ENSMSIG00000025595) #13	Il33 (ENSMSIG00000025601) #14	Trpd52l3 (ENSMSIG00000025636) #15	Uhrf2 (ENSMSIG00000025646) #16	Gldc (ENSMSIG00000025683) #17	ENSMSIG00000025712	Mbl2 (ENSMSIG00000025715) #18	Dkk1 (ENSMSIG00000025730) #19	Prkg1 (ENSMSIG00000025753) #20	Cstf2t (ENSMSIG00000025837) #21	A1cf (ENSMSIG00000025842) #22	Asah2 (ENSMSIG00000025919) #23	Sgms1 (ENSMSIG00000025956) #24	ENSMSIG00000025995	Minpp1 (ENSMSIG00000026013)	Papss2 (ENSMSIG00000026029)	ENSMSIG00000026081	Atad1 (ENSMSIG00000026090)	ENSMSIG00000026127	Rnls (ENSMSIG00000026145)	ENSMSIG00000026154
Mouse	MODERN SPECIES	10	Cd274 (ENSMUSG00000016496)	Pdcd1lg2 (ENSMUSG00000016498) #8	Ric1 (ENSMUSG00000038658) #9	Ermp1 (ENSMUSG00000046324) #10	Mlana (ENSMUSG00000024806) #11	9930021J03Rik (ENSMUSG00000046138) #12	Ranbp6 (ENSMUSG00000074909) #13	Il33 (ENSMUSG00000024810) #14	Trpd52l3 (ENSMUSG00000024815) #15	Uhrf2 (ENSMUSG00000024817) #16	Gldc (ENSMUSG00000024827) #17	Mbl2 (ENSMUSG00000024863) #18	Dkk1 (ENSMUSG00000024868) #19	Prkg1 (ENSMUSG00000052920) #20	Cstf2t (ENSMUSG00000053536) #21	A1cf (ENSMUSG00000052595) #22	Asah2 (ENSMUSG00000024887) #23	Sgms1 (ENSMUSG00000040451) #24	Rpl9-ps6 (ENSMUSG00000062456)	Minpp1 (ENSMUSG00000024896)	Papss2 (ENSMUSG00000024899)	Atad1 (ENSMUSG00000013662)	Pten (ENSMUSG00000013663)	ENSMUSG00000121574	ENSMUSG00000121573	Rnls (ENSMUSG00000071573)	Lipo4 (ENSMUSG00000079344)	Lipo3 (ENSMUSG00000024766)	Gm8978 (ENSMUSG00000086812)	Lipo2 (ENSMUSG00000087303)	Lipo1 (ENSMUSG00000079342)
Ryukyu mouse	MODERN SPECIES	10	Cd274 (MGP_CAROLIEiJ_G0022858)	Pdcd1lg2 (MGP_CAROLIEiJ_G0022859) #8	Ric1 (MGP_CAROLIEiJ_G0022860) #9	Ermp1 (MGP_CAROLIEiJ_G0022861) #10	Mlana (MGP_CAROLIEiJ_G0022862) #11	9930021J03Rik (MGP_CAROLIEiJ_G0022863) #12	Ranbp6 (MGP_CAROLIEiJ_G0022864) #13	Il33 (MGP_CAROLIEiJ_G0022865) #14	Trpd52l3 (MGP_CAROLIEiJ_G0022866) #15	Uhrf2 (MGP_CAROLIEiJ_G0022867) #16	Gldc (MGP_CAROLIEiJ_G0022868) #17	Mbl2 (MGP_CAROLIEiJ_G0022869) #18	Dkk1 (MGP_CAROLIEiJ_G0022870) #19	Prkg1 (MGP_CAROLIEiJ_G0022871) #20	Cstf2t (MGP_CAROLIEiJ_G0022872) #21	A1cf (MGP_CAROLIEiJ_G0022873) #22	Asah2 (MGP_CAROLIEiJ_G0022874) #23	Sgms1 (MGP_CAROLIEiJ_G0022875) #24	Minpp1 (MGP_CAROLIEiJ_G0022876)	Papss2 (MGP_CAROLIEiJ_G0022877)	Atad1 (MGP_CAROLIEiJ_G0022878)	MGP_CAROLIEiJ_G0022879	Rnls (MGP_CAROLIEiJ_G0022880)	Lipf (MGP_CAROLIEiJ_G0022882)	Lipk (MGP_CAROLIEiJ_G0022883)	Lipn (MGP_CAROLIEiJ_G0022884)	Lipm (MGP_CAROLIEiJ_G0022885)	Ankrd22 (MGP_CAROLIEiJ_G0022886)	Stambpl1 (MGP_CAROLIEiJ_G0022887)	Acta2 (MGP_CAROLIEiJ_G0022888)	Fas (MGP_CAROLIEiJ_G0022889)
Shrew mouse	MODERN SPECIES		Cd274 (MGP_PahariEiJ_G0014351)	Pdcd1lg2 (MGP_PahariEiJ_G0014352) #8	Ric1 (MGP_PahariEiJ_G0014353) #9	Ermp1 (MGP_PahariEiJ_G0014354) #10	Mlana (MGP_PahariEiJ_G0014355) #11	9930021J03Rik (MGP_PahariEiJ_G0014356) #12	Ranbp6 (MGP_PahariEiJ_G0014357) #13	Il33 (MGP_PahariEiJ_G0014358) #14	Trpd52l3 (MGP_PahariEiJ_G0014359) #15	Uhrf2 (MGP_PahariEiJ_G0014360) #16	Gldc (MGP_PahariEiJ_G0014361) #17	Mbl2 (MGP_PahariEiJ_G0014362) #18	Dkk1 (MGP_PahariEiJ_G0014363) #19	Prkg1 (MGP_PahariEiJ_G0014364) #20	Cstf2t (MGP_PahariEiJ_G0014365) #21	A1cf (MGP_PahariEiJ_G0014366) #22	Asah2 (MGP_PahariEiJ_G0014367) #23	Sgms1 (MGP_PahariEiJ_G0014368) #24	Minpp1 (MGP_PahariEiJ_G0014369)	MGP_PahariEiJ_G0014370	Atad1 (MGP_PahariEiJ_G0014371)	MGP_PahariEiJ_G0014372	MGP_PahariEiJ_G0014373	Lipo1 (MGP_PahariEiJ_G0014374)	MGP_PahariEiJ_G0014376	Lipf (MGP_PahariEiJ_G0014377)	Lipk (MGP_PahariEiJ_G0014378)	Lipn (MGP_PahariEiJ_G0014379)	Lipm (MGP_PahariEiJ_G0014380)	Ankrd22 (MGP_PahariEiJ_G0014381)	MGP_PahariEiJ_G0014382
Rat	MODERN SPECIES		Ermp1 (ENSRNOG00000010915) #10	Mlana (ENSRNOG00000036608) #11	RGD1311595 (ENSRNOG00000026942) #12	Ranbp6 (ENSRNOG00000053859) #13	Il33 (ENSRNOG00000016456) #14	Tpd52l3 (ENSRNOG00000042441) #15	AABR07006688.2 (ENSRNOG00000031628)	AABR07006688.1 (ENSRNOG00000030934)	Uhrf2 (ENSRNOG00000011308) #16	Gldc (ENSRNOG00000011599) #17	Chchd4 (ENSRNOG00000069157)	AABR07006691.1 (ENSRNOG00000011637) #18	Dkk1 (ENSRNOG00000048688) #19	Prkg1 (ENSRNOG00000053728) #20	Cstf2t (ENSRNOG00000070422) #21	A1cf (ENSRNOG00000033195) #22	Asah2 (ENSRNOG00000012196) #23	Sgms1 (ENSRNOG00000012536) #24	AABR07006740.1 (ENSRNOG00000058869)	Minpp1 (ENSRNOG00000011287)	Papss2 (ENSRNOG00000011068)	Atad1 (ENSRNOG00000010861)	Pten (ENSRNOG00000020723)	AC094647.1 (ENSRNOG00000055176)	Rnls (ENSRNOG00000020705)	Lipo1 (ENSRNOG00000025444)	Lipj (ENSRNOG00000049161)	Lipf (ENSRNOG00000019448)	Lipk (ENSRNOG00000019409)	Lipn (ENSRNOG00000057173)	Lipm (ENSRNOG00000019301)
Upper Galilee mountains blind mole rat	MODERN SPECIES	966																A1cf (ENSNGAG00000015136) #22
Lesser Egyptian jerboa	MODERN SPECIES	50	Jak2 (ENSJJAG00000012271)	Rln1 (ENSJJAG00000013838)	Plgrkt (ENSJJAG00000010846)	Ric1 (ENSJJAG00000014841) #9	Ermp1 (ENSJJAG00000021848) #10	Mlana (ENSJJAG00000022272) #11	9930021J03Rik (ENSJJAG00000016877) #12	Ranbp6 (ENSJJAG00000010492) #13	ENSJJAG00000006290 #14	Uhrf2 (ENSJJAG00000023371) #16	Gldc (ENSJJAG00000023082) #17	Dkk1 (ENSJJAG00000002379) #19	Prkg1 (ENSJJAG00000015715) #20	Cstf2t (ENSJJAG00000019881) #21	ENSJJAG00000010649	ENSJJAG00000011550 #22	Asah2 (ENSJJAG00000009585) #23	Sgms1 (ENSJJAG00000017890) #24	Minpp1 (ENSJJAG00000024428)	Papss2 (ENSJJAG00000015775)	Atad1 (ENSJJAG00000008539)	ENSJJAG00000017701	Rnls (ENSJJAG00000019270)	Lipo1 (ENSJJAG00000017046)	Lipf (ENSJJAG00000020561)	Lipk (ENSJJAG00000016965)	Lipn (ENSJJAG00000017640)	ENSJJAG00000012068	Lipm (ENSJJAG00000016479)	Ankrd22 (ENSJJAG00000022505)	ENSJJAG00000010334
Kangaroo rat	MODERN SPECIES	353	Ccdc6 (ENSDORG00000004897)	Slc16a9 (ENSDORG00000025300)	Fam13c (ENSDORG00000023161)	Phyhipl (ENSDORG00000023664)	Bicc1 (ENSDORG00000011450)	Tfam (ENSDORG00000014013)	Ube2d1 (ENSDORG00000014012)	Cisd1 (ENSDORG00000014010)	Ipmk (ENSDORG00000014009)	Zwint (ENSDORG00000028117)	Pcdh15 (ENSDORG00000003301)	Mbl2 (ENSDORG00000000732) #18	Dkk1 (ENSDORG00000005723) #19	Cstf2t (ENSDORG00000011245) #21	Prkg1 (ENSDORG00000008830) #20	ENSDORG00000025837 #22	Asah2 (ENSDORG00000015905) #23	ENSDORG00000027918	Sgms1 (ENSDORG00000016624) #24	Minpp1 (ENSDORG00000026951)	Papss2 (ENSDORG00000004412)	Atad1 (ENSDORG00000004456)	Pten (ENSDORG00000008930)	ENSDORG00000014665	ENSDORG00000023350	Lipf (ENSDORG00000001617)	Lipk (ENSDORG00000001621)	Lipn (ENSDORG00000015420)	Lipm (ENSDORG00000001760)	Ankrd22 (ENSDORG00000001767)	ENSDORG00000012676
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309.i	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Naked mole-rat female	MODERN SPECIES	4				ENSHGLG00000001334	ENSHGLG00000018770	ENSHGLG00000049296	ENSHGLG00000019528	PCDH15 (ENSHGLG00000007425)	ENSHGLG00000050306	MBL2 (ENSHGLG00000003224) #18	DKK1 (ENSHGLG00000003778) #19	ENSHGLG00000007097 #20	ENSHGLG00000021086	CSTF2T (ENSHGLG00000015478) #21	ENSHGLG00000036537 #20	ENSHGLG00000008955 #22	ENSHGLG00000033052	ENSHGLG00000018465 #23	ENSHGLG00000019589	ENSHGLG00000018994 #24	ENSHGLG00000004068	ENSHGLG00000046147	ENSHGLG00000018859	ENSHGLG00000047821	PAPSS2 (ENSHGLG00000018676)	ENSHGLG00000032735	ATAD1 (ENSHGLG00000042263)	ENSHGLG00000035387	ENSHGLG00000008649	RNLS (ENSHGLG00000044945)	LIPF (ENSHGLG00000003846)
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309.i	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Guinea pig	MODERN SPECIES	15	PHYHIPL (ENSCPOG00000030387)	BICC1 (ENSCPOG00000015585)	ENSCPOG00000024430	TFAM (ENSCPOG00000034116)	UBE2D1 (ENSCPOG00000037622)	ENSCPOG00000031595	IPMK (ENSCPOG00000000222)	ZWINT (ENSCPOG00000009580)	ENSCPOG00000021776	PCDH15 (ENSCPOG00000004846)	MBL2 (ENSCPOG00000002383) #18	DKK1 (ENSCPOG00000022199) #19	ENSCPOG00000013634	CSTF2T (ENSCPOG00000004195) #21	PRKG1 (ENSCPOG00000005830) #20	A1CF (ENSCPOG00000009807) #22	ENSCPOG00000014978 #23	SGMS1 (ENSCPOG00000014981) #24	ENSCPOG00000037619	KIF20B (ENSCPOG00000003302)	PANK1 (ENSCPOG00000010351)	SLC16A12 (ENSCPOG00000009338)	IFIT5 (ENSCPOG00000008531)	IFIT1B (ENSCPOG00000038041)	IFIT3 (ENSCPOG00000033428)	LIPA (ENSCPOG00000000962)	CH25H (ENSCPOG00000006452)	FAS (ENSCPOG00000040596)	ACTA2 (ENSCPOG00000032916)	STAMBPL1 (ENSCPOG00000011578)	ANKRD22 (ENSCPOG00000040272)
Hystricomorpha_b	ANCESTRAL SPECIES	72	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309.i	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Long-tailed chinchilla	MODERN SPECIES	132	SLC16A9 (ENSCLAG00000012240)	FAM13C (ENSCLAG00000014713)	PHYHIPL (ENSCLAG00000015004)	BICC1 (ENSCLAG00000012171)	TFAM (ENSCLAG00000009976)	UBE2D1 (ENSCLAG00000009498)	CISD1 (ENSCLAG00000014672)	IPMK (ENSCLAG00000011010)	ZWINT (ENSCLAG00000008307)	PCDH15 (ENSCLAG00000013509)	MBL2 (ENSCLAG00000015818) #18	DKK1 (ENSCLAG00000015344) #19	ENSCLAG00000015184	CSTF2T (ENSCLAG00000017916) #21	PRKG1 (ENSCLAG00000012248) #20	A1CF (ENSCLAG00000010424) #22	ENSCLAG00000015605 #23	SGMS1 (ENSCLAG00000011875) #24	MINPP1 (ENSCLAG00000010519)	ENSCLAG00000012470	PAPSS2 (ENSCLAG00000007940)	ATAD1 (ENSCLAG00000012023)	ENSCLAG00000014815	ENSCLAG00000017363	LIPJ (ENSCLAG00000008996)	LIPF (ENSCLAG00000010117)	LIPK (ENSCLAG00000009773)	LIPN (ENSCLAG00000012833)	LIPM (ENSCLAG00000009261)	ANKRD22 (ENSCLAG00000013284)	STAMBPL1 (ENSCLAG00000012073)
Degu	MODERN SPECIES	46	DDX50 (ENSODEG00000014597)	ENSODEG00000012772	ENSODEG00000013170	IPMK (ENSODEG00000012859)	ENSODEG00000015108	ENSODEG00000012789	ENSODEG00000013211	ZWINT (ENSODEG00000013717)	ENSODEG00000020229	PCDH15 (ENSODEG00000013433)	MBL2 (ENSODEG00000013389) #18	DKK1 (ENSODEG00000012535) #19	ENSODEG00000012827	CSTF2T (ENSODEG00000012386) #21	PRKG1 (ENSODEG00000014448) #20	ENSODEG00000012177 #22	ENSODEG00000014023	ENSODEG00000013960 #23	SGMS1 (ENSODEG00000014772) #24	ENSODEG00000013144
Sciuridae	ANCESTRAL SPECIES	30	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.i	ENSGT00940000155309	ENSGT00960000189382	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Marmotini	ANCESTRAL SPECIES	107												ENSGT00940000154368.l.c #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Alpin marmot	MODERN SPECIES	57	CHAT (ENSMMMG00000019014)	C10orf53 (ENSMMMG00000019013)	OGDHL (ENSMMMG00000019000)	PARG (ENSMMMG00000018961)	ENSMMMG00000018909	ENSMMMG00000018893	ENSMMMG00000018873	ENSMMMG00000018852	MARCHF8 (ENSMMMG00000018833)	ENSMMMG00000018821	ENSMMMG00000018817 #18	DKK1 (ENSMMMG00000018805) #19	CSTF2T (ENSMMMG00000018794) #21	PRKG1 (ENSMMMG00000018751) #20	ENSMMMG00000018683	A1CF (ENSMMMG00000018647) #22	ENSMMMG00000018616 #23	SGMS1 (ENSMMMG00000018607) #24	MINPP1 (ENSMMMG00000018583)	PAPSS2 (ENSMMMG00000018529)	ENSMMMG00000018524	ATAD1 (ENSMMMG00000018512)	PTEN (ENSMMMG00000018507)	RNLS (ENSMMMG00000018475)	LIPF (ENSMMMG00000018417)	LIPK (ENSMMMG00000018400)	LIPN (ENSMMMG00000018385)	LIPM (ENSMMMG00000018373)	ANKRD22 (ENSMMMG00000018351)	STAMBPL1 (ENSMMMG00000018314)	ACTA2 (ENSMMMG00000018299)
Marmotini_b	ANCESTRAL SPECIES	200													ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Arctic ground squirrel	MODERN SPECIES	460													DKK1 (ENSUPAG00010010977) #19	CSTF2T (ENSUPAG00010010968) #21	PRKG1 (ENSUPAG00010010916) #20	A1CF (ENSUPAG00010010871) #22
Squirrel	MODERN SPECIES	335																ENSSTOG00000005763 #22	ENSSTOG00000025885 #23	SGMS1 (ENSSTOG00000001222) #24	MINPP1 (ENSSTOG00000022903)	PAPSS2 (ENSSTOG00000006536)	ATAD1 (ENSSTOG00000006563)	PTEN (ENSSTOG00000022936)	ENSSTOG00000033410	LIPF (ENSSTOG00000007782)	LIPK (ENSSTOG00000007804)	LIPN (ENSSTOG00000007828)	LIPM (ENSSTOG00000024787)	ANKRD22 (ENSSTOG00000002531)	STAMBPL1 (ENSSTOG00000015571)	ACTA2 (ENSSTOG00000015573)	ENSSTOG00000031149
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005004455	ENSSVLG00005004485	ENSSVLG00005004508	ENSSVLG00005004616	ENSSVLG00005004768	ENSSVLG00005004794	ENSSVLG00005004849	ENSSVLG00005004862	ENSSVLG00005004891	ENSSVLG00005004910	MBL2 (ENSSVLG00005004931) #18	DKK1 (ENSSVLG00005004962) #19	ENSSVLG00005005006 #20	ENSSVLG00005005092 #20	CSTF2T (ENSSVLG00005005123) #21	A1CF (ENSSVLG00005005165) #22	ENSSVLG00005005291 #23	ENSSVLG00005005562	SGMS1 (ENSSVLG00005005589) #24	MINPP1 (ENSSVLG00005005659)	PAPSS2 (ENSSVLG00005005742)	ENSSVLG00005005787	ATAD1 (ENSSVLG00005005817)	PTEN (ENSSVLG00005005867)	RNLS (ENSSVLG00005005885)	LIPF (ENSSVLG00005005918)	LIPK (ENSSVLG00005006013)	ENSSVLG00005006077	LIPN (ENSSVLG00005006105)	LIPM (ENSSVLG00005006172)	ANKRD22 (ENSSVLG00005006223)
Lagomorpha	ANCESTRAL SPECIES	18	ENSGT00530000066649	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Rabbit	MODERN SPECIES	9	ENSOCUG00000036397	CISD1 (ENSOCUG00000002949)	IPMK (ENSOCUG00000006432)	ENSOCUG00000033571	ENSOCUG00000008290	ENSOCUG00000033494	ZWINT (ENSOCUG00000006806)	ENSOCUG00000038084	PCDH15 (ENSOCUG00000000268)	ENSOCUG00000023765	ENSOCUG00000027170	MBL2 (ENSOCUG00000012742) #18	DKK1 (ENSOCUG00000011487) #19	PRKG1 (ENSOCUG00000011473) #20	ENSOCUG00000027463 #21	A1CF (ENSOCUG00000011587) #22	ENSOCUG00000017169 #23	SGMS1 (ENSOCUG00000010965) #24	ENSOCUG00000035355	PAPSS2 (ENSOCUG00000012078)	ENSOCUG00000034817	ATAD1 (ENSOCUG00000012082)	PTEN (ENSOCUG00000008774)	RNLS (ENSOCUG00000010512)	LIPJ (ENSOCUG00000029546)	LIPF (ENSOCUG00000012478)	LIPK (ENSOCUG00000012487)	LIPN (ENSOCUG00000012495)	LIPM (ENSOCUG00000012505)	ANKRD22 (ENSOCUG00000004617)	STAMBPL1 (ENSOCUG00000008174)
Pika	MODERN SPECIES	2095																A1CF (ENSOPRG00000010667) #22
Primates	ANCESTRAL SPECIES	16	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Bushbaby	MODERN SPECIES	123	FAM13C (ENSOGAG00000007787)	PHYHIPL (ENSOGAG00000024079)	BICC1 (ENSOGAG00000000304)	ENSOGAG00000024681	TFAM (ENSOGAG00000014943)	UBE2D1 (ENSOGAG00000034735)	CISD1 (ENSOGAG00000011290)	IPMK (ENSOGAG00000011288)	ENSOGAG00000032867	ZWINT (ENSOGAG00000008709)	PCDH15 (ENSOGAG00000002500)	MBL2 (ENSOGAG00000013514) #18	DKK1 (ENSOGAG00000004251) #19	PRKG1 (ENSOGAG00000004246) #20	CSTF2T (ENSOGAG00000014565) #21	A1CF (ENSOGAG00000012884) #22	ENSOGAG00000016502 #23	SGMS1 (ENSOGAG00000028438) #24	ENSOGAG00000029722	MINPP1 (ENSOGAG00000015159)	PAPSS2 (ENSOGAG00000014044)	ATAD1 (ENSOGAG00000029770)	ENSOGAG00000031772	LIPJ (ENSOGAG00000015768)	LIPF (ENSOGAG00000006416)	LIPK (ENSOGAG00000006423)	LIPN (ENSOGAG00000006425)	LIPM (ENSOGAG00000006428)	ANKRD22 (ENSOGAG00000006432)	STAMBPL1 (ENSOGAG00000006433)	ACTA2 (ENSOGAG00000028125)
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Lemuriformes_a	ANCESTRAL SPECIES	21										ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Coquerels sifaka	MODERN SPECIES	787												MBL2 (ENSPCOG00000014913) #18	DKK1 (ENSPCOG00000022326) #19	PRKG1 (ENSPCOG00000003586) #20	CSTF2T (ENSPCOG00000010982) #21	A1CF (ENSPCOG00000024172) #22	ENSPCOG00000002974 #23	SGMS1 (ENSPCOG00000026206) #24	MINPP1 (ENSPCOG00000017873)	PAPSS2 (ENSPCOG00000014888)	ATAD1 (ENSPCOG00000028448)	KLLN (ENSPCOG00000019117)	PTEN (ENSPCOG00000004892)	ENSPCOG00000023071	RNLS (ENSPCOG00000014278)	ENSPCOG00000027413	LIPJ (ENSPCOG00000021051)	LIPF (ENSPCOG00000027465)	LIPK (ENSPCOG00000014470)	LIPN (ENSPCOG00000021772)	LIPM (ENSPCOG00000007567)
Greater bamboo lemur	MODERN SPECIES	1642														ENSPSMG00000003500 #21	ENSPSMG00000003491 #20	A1CF (ENSPSMG00000003460) #22	ENSPSMG00000003302 #23	SGMS1 (ENSPSMG00000003184) #24	MINPP1 (ENSPSMG00000003164)
Mouse lemur	MODERN SPECIES	6	DNAJC12 (ENSMICG00000007534)	ENSMICG00000042864	SIRT1 (ENSMICG00000007538)	HERC4 (ENSMICG00000007545)	MYPN (ENSMICG00000007558)	PBLD (ENSMICG00000007573)	HNRNPH3 (ENSMICG00000007581)	ENSMICG00000037415	ENSMICG00000046554	PCDH15 (ENSMICG00000008204)	ENSMICG00000030551 #21	MBL2 (ENSMICG00000037938) #18	DKK1 (ENSMICG00000012920) #19	PRKG1 (ENSMICG00000015972) #20	ENSMICG00000000867 #21	A1CF (ENSMICG00000003377) #22	ENSMICG00000017606 #23	SGMS1 (ENSMICG00000017607) #24	MINPP1 (ENSMICG00000004585)	PAPSS2 (ENSMICG00000003328)	ATAD1 (ENSMICG00000003338)	KLLN (ENSMICG00000036093)	PTEN (ENSMICG00000027321)	RNLS (ENSMICG00000014189)	LIPJ (ENSMICG00000014733)	LIPF (ENSMICG00000014742)	LIPK (ENSMICG00000008333)	LIPN (ENSMICG00000006496)	LIPM (ENSMICG00000033459)	ANKRD22 (ENSMICG00000006521)	STAMBPL1 (ENSMICG00000006526)
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Tarsier	MODERN SPECIES	6671																A1CF (ENSTSYG00000001755) #22	ASAH2 (ENSTSYG00000036300) #23	ENSTSYG00000037067 #24	ENSTSYG00000004769	MINPP1 (ENSTSYG00000001663)
Simiiformes	ANCESTRAL SPECIES	17	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.d	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.d	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695
Rhinopithecus	ANCESTRAL SPECIES	209																ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.k	ENSGT00560000078481	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695
Golden snub-nosed monkey	MODERN SPECIES	1752																A1CF (ENSRROG00000041398) #22	ENSRROG00000044041 #23
Black snub-nosed monkey	MODERN SPECIES	262															ENSRBIG00000044121 #20	A1CF (ENSRBIG00000042892) #22	ENSRBIG00000035373 #23	ENSRBIG00000043469	ENSRBIG00000028245	MINPP1 (ENSRBIG00000038019)	PAPSS2 (ENSRBIG00000042852)	ENSRBIG00000037081	KLLN (ENSRBIG00000043475)	ENSRBIG00000041113
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.d	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695
Vervet Monkey	MODERN SPECIES	28	SLC16A9 (ENSCSAG00000007340)	ENSCSAG00000007333	FAM13C (ENSCSAG00000007323)	PHYHIPL (ENSCSAG00000007315)	BICC1 (ENSCSAG00000007305)	TFAM (ENSCSAG00000007291)	UBE2D1 (ENSCSAG00000007284)	CISD1 (ENSCSAG00000007277)	IPMK (ENSCSAG00000007274)	ZWINT (ENSCSAG00000007269)	PCDH15 (ENSCSAG00000007212)	MBL2 (ENSCSAG00000007052) #18	DKK1 (ENSCSAG00000007048) #19	PRKG1 (ENSCSAG00000007038) #20	CSTF2T (ENSCSAG00000018437) #21	A1CF (ENSCSAG00000007032) #22	ENSCSAG00000007014 #23	SGMS1 (ENSCSAG00000006972) #24	ENSCSAG00000018438	MINPP1 (ENSCSAG00000006960)	ENSCSAG00000006942	PAPSS2 (ENSCSAG00000006937)	PTEN (ENSCSAG00000006930)	ENSCSAG00000006927	LIPJ (ENSCSAG00000006921)	LIPF (ENSCSAG00000006905)	LIPK (ENSCSAG00000006868)	LIPN (ENSCSAG00000006856)	ENSCSAG00000006847	LIPM (ENSCSAG00000006821)	ANKRD22 (ENSCSAG00000006799)
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00910000147615	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000154185.l.a.b	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00910000147615	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695
Olive baboon	MODERN SPECIES	2	BICC1 (ENSPANG00000022024)	ENSPANG00000022026	UBE2D1 (ENSPANG00000022016)	CISD1 (ENSPANG00000037184)	IPMK (ENSPANG00000021997)	ENSPANG00000039249	ENSPANG00000051181	ZWINT (ENSPANG00000022000)	ENSPANG00000043602	PCDH15 (ENSPANG00000022002)	MBL2 (ENSPANG00000022003) #18	DKK1 (ENSPANG00000047322) #19	ENSPANG00000047166	CSTF2T (ENSPANG00000047650) #21	PRKG1 (ENSPANG00000021990) #20	A1CF (ENSPANG00000021988) #22	ENSPANG00000021983 #23	ENSPANG00000048588	SGMS1 (ENSPANG00000021979) #24	ENSPANG00000045920	ENSPANG00000021973	MINPP1 (ENSPANG00000021975)	PAPSS2 (ENSPANG00000021893)	ATAD1 (ENSPANG00000021894)	KLLN (ENSPANG00000001084)	PTEN (ENSPANG00000021897)	ENSPANG00000048267	ENSPANG00000046280	LIPJ (ENSPANG00000021890)	ENSPANG00000051212	ENSPANG00000021898
Cercopithecinae_d	ANCESTRAL SPECIES	95										ENSGT00940000154368.l #18	ENSGT00910000147615	ENSGT00940000161319 #19	ENSGT00940000154546.fb.b.b	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000004542.i.b	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860
Drill	MODERN SPECIES	1039										MBL2 (ENSMLEG00000038002) #18	ENSMLEG00000028221	ENSMLEG00000039085	DKK1 (ENSMLEG00000027499) #19	ENSMLEG00000026260	PRKG1 (ENSMLEG00000015773) #20	A1CF (ENSMLEG00000037223) #22	ENSMLEG00000038590 #23	SGMS1 (ENSMLEG00000027360) #24	ENSMLEG00000029605	ENSMLEG00000029162	MINPP1 (ENSMLEG00000041881)	ENSMLEG00000040799	PAPSS2 (ENSMLEG00000018100)	ENSMLEG00000010804	KLLN (ENSMLEG00000030459)	PTEN (ENSMLEG00000036973)
Sooty mangabey	MODERN SPECIES	115							ENSCATG00000038698	ENSCATG00000008963	ZNF37A (ENSCATG00000016920)	MBL2 (ENSCATG00000006043) #18	ENSCATG00000039205	DKK1 (ENSCATG00000033125) #19	ENSCATG00000016895	ENSCATG00000041868 #21	PRKG1 (ENSCATG00000037311) #20	A1CF (ENSCATG00000043715) #22	ENSCATG00000035084 #23	SGMS1 (ENSCATG00000031807) #24	ENSCATG00000040696	ENSCATG00000044947	MINPP1 (ENSCATG00000029895)	PAPSS2 (ENSCATG00000022695)	ENSCATG00000008106	KLLN (ENSCATG00000043653)	PTEN (ENSCATG00000030888)	RNLS (ENSCATG00000036219)	LIPJ (ENSCATG00000044436)	LIPF (ENSCATG00000032982)	LIPK (ENSCATG00000036197)	LIPN (ENSCATG00000044254)	LIPM (ENSCATG00000021790)
Macaca	ANCESTRAL SPECIES	11	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00910000147615	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.b	ENSGT00560000078481	ENSGT00550000074823.a.i.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Pig-tailed macaque	MODERN SPECIES	104										MBL2 (ENSMNEG00000040758) #18	ENSMNEG00000040204	DKK1 (ENSMNEG00000030221) #19	ENSMNEG00000039289	ENSMNEG00000031410 #21	PRKG1 (ENSMNEG00000032401) #20	A1CF (ENSMNEG00000031454) #22	ENSMNEG00000033372 #23	SGMS1 (ENSMNEG00000037228) #24	ENSMNEG00000045306	MINPP1 (ENSMNEG00000035494)	PAPSS2 (ENSMNEG00000037017)	ENSMNEG00000029738	PTEN (ENSMNEG00000028054)	RNLS (ENSMNEG00000033738)	LIPJ (ENSMNEG00000030144)	LIPF (ENSMNEG00000027700)	LIPK (ENSMNEG00000034597)	LIPN (ENSMNEG00000034373)	LIPM (ENSMNEG00000035058)	ANKRD22 (ENSMNEG00000039914)	ACTA2 (ENSMNEG00000031257)
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000156416	ENSGT00940000154185.l.a.b	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00910000147615	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a.i.b	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000154148.a.a
Crab-eating macaque	MODERN SPECIES	19	TFAM (ENSMFAG00000037328)	UBE2D1 (ENSMFAG00000045061)	IPMK (ENSMFAG00000049732)	ZWINT (ENSMFAG00000002436)	ENSMFAG00000047371	PCDH15 (ENSMFAG00000041043)	ENSMFAG00000062138	MBL2 (ENSMFAG00000032115) #18	ENSMFAG00000000420	DKK1 (ENSMFAG00000062136) #19	PRKG1 (ENSMFAG00000042225) #20	ENSMFAG00000051103	ENSMFAG00000042009 #21	ENSMFAG00000065167	ENSMFAG00000051947	A1CF (ENSMFAG00000035948) #22	ENSMFAG00000034694 #23	SGMS1 (ENSMFAG00000002389) #24	MINPP1 (ENSMFAG00000000189)	PAPSS2 (ENSMFAG00000041464)	ATAD1 (ENSMFAG00000033944)	KLLN (ENSMFAG00000001967)	PTEN (ENSMFAG00000003544)	RNLS (ENSMFAG00000034629)	LIPJ (ENSMFAG00000037866)	LIPF (ENSMFAG00000035985)	LIPK (ENSMFAG00000044740)	LIPN (ENSMFAG00000044901)	LIPM (ENSMFAG00000001039)	ANKRD22 (ENSMFAG00000042098)	STAMBPL1 (ENSMFAG00000033260)
Rhesus	MODERN SPECIES	19	PHYHIPL (ENSMMUG00000003705)	ENSMMUG00000062079	BICC1 (ENSMMUG00000015750)	ENSMMUG00000044079	TFAM (ENSMMUG00000019829)	UBE2D1 (ENSMMUG00000019825)	IPMK (ENSMMUG00000063429)	ENSMMUG00000051549	ENSMMUG00000055282	ZWINT (ENSMMUG00000022376)	PCDH15 (ENSMMUG00000009794)	MBL2 (ENSMMUG00000046929) #18	DKK1 (ENSMMUG00000010847) #19	PRKG1 (ENSMMUG00000010844) #20	CSTF2T (ENSMMUG00000058901) #21	A1CF (ENSMMUG00000007077) #22	ASAH2 (ENSMMUG00000007078) #23	SGMS1 (ENSMMUG00000007081) #24	PAPSS2 (ENSMMUG00000006411)	ATAD1 (ENSMMUG00000006414)	KLLN (ENSMMUG00000055507)	PTEN (ENSMMUG00000008431)	ENSMMUG00000058361	RNLS (ENSMMUG00000014341)	LIPJ (ENSMMUG00000014343)	LIPF (ENSMMUG00000023148)	LIPK (ENSMMUG00000016858)	LIPN (ENSMMUG00000000468)	LIPM (ENSMMUG00000000469)	ANKRD22 (ENSMMUG00000000470)	STAMBPL1 (ENSMMUG00000009339)
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.b.z	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860
Gibbon	MODERN SPECIES	18	ENSNLEG00000034149	ENSNLEG00000004962	FILIP1 (ENSNLEG00000004988)	SENP6 (ENSNLEG00000004998)	MYO6 (ENSNLEG00000005076)	IMPG1 (ENSNLEG00000005102)	HTR1B (ENSNLEG00000018381)	MEI4 (ENSNLEG00000035107)	ZWINT (ENSNLEG00000011900)	ENSNLEG00000011914	MBL2 (ENSNLEG00000012005) #18	ENSNLEG00000029986	DKK1 (ENSNLEG00000012012) #19	CSTF2T (ENSNLEG00000012025) #21	PRKG1 (ENSNLEG00000012021) #20	A1CF (ENSNLEG00000012028) #22	ENSNLEG00000012056 #23	ENSNLEG00000033693	SGMS1 (ENSNLEG00000012084) #24	MINPP1 (ENSNLEG00000012094)	PAPSS2 (ENSNLEG00000012109)	ATAD1 (ENSNLEG00000012135)	PTEN (ENSNLEG00000012141)	RNLS (ENSNLEG00000012148)	LIPJ (ENSNLEG00000012160)	LIPF (ENSNLEG00000012172)	LIPK (ENSNLEG00000012196)	LIPN (ENSNLEG00000012203)	LIPM (ENSNLEG00000012208)	ANKRD22 (ENSNLEG00000012212)	STAMBPL1 (ENSNLEG00000012216)
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT01090000261235	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.b.z	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695
Orangutan	MODERN SPECIES	1	PHYHIPL (ENSPPYG00000002427)	BICC1 (ENSPPYG00000002429)	TFAM (ENSPPYG00000039039)	UBE2D1 (ENSPPYG00000002431)	CISD1 (ENSPPYG00000032997)	IPMK (ENSPPYG00000002433)	ZWINT (ENSPPYG00000002434)	ENSPPYG00000037371	ENSPPYG00000002436	MBL2 (ENSPPYG00000002437) #18	ENSPPYG00000039565	DKK1 (ENSPPYG00000002438) #19	PRKG1 (ENSPPYG00000002439) #20	CSTF2T (ENSPPYG00000002441) #21	ENSPPYG00000033435	A1CF (ENSPPYG00000002819) #22	ENSPPYG00000039302 #23	SGMS1 (ENSPPYG00000002453) #24	ENSPPYG00000002454	MINPP1 (ENSPPYG00000002452)	PAPSS2 (ENSPPYG00000002450)	ATAD1 (ENSPPYG00000002449)	PTEN (ENSPPYG00000002448)	RNLS (ENSPPYG00000002447)	LIPJ (ENSPPYG00000041681)	LIPF (ENSPPYG00000002445)	LIPK (ENSPPYG00000002444)	LIPN (ENSPPYG00000002443)	LIPM (ENSPPYG00000002455)	ANKRD22 (ENSPPYG00000002456)	STAMBPL1 (ENSPPYG00000002457)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT01090000261235.b	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.b.z	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459
Gorilla	MODERN SPECIES	1	BICC1 (ENSGGOG00000005484)	ENSGGOG00000036830	TFAM (ENSGGOG00000037416)	UBE2D1 (ENSGGOG00000004811)	CISD1 (ENSGGOG00000022769)	IPMK (ENSGGOG00000008790)	ENSGGOG00000027305	ZWINT (ENSGGOG00000007258)	ENSGGOG00000039537	MBL2 (ENSGGOG00000039764) #18	ENSGGOG00000037070	DKK1 (ENSGGOG00000002557) #19	PRKG1 (ENSGGOG00000041471) #20	ENSGGOG00000042388 #21	ENSGGOG00000036416 #21	A1CF (ENSGGOG00000009670) #22	ENSGGOG00000042494	ENSGGOG00000038745	ENSGGOG00000038533	SGMS1 (ENSGGOG00000006170) #24	ENSGGOG00000037340	ENSGGOG00000014573	ENSGGOG00000042258	NCOA4 (ENSGGOG00000016416)	MSMB (ENSGGOG00000014834)	OGDHL (ENSGGOG00000006646)	ENSGGOG00000023021	CHAT (ENSGGOG00000015179)	SLC18A3 (ENSGGOG00000034966)	ERCC6 (ENSGGOG00000006864)	DRGX (ENSGGOG00000008180)
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT01090000261235.b	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.b.z	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00550000076459
Human	MODERN SPECIES	1	MRLN (ENSG00000227877)	SLC16A9 (ENSG00000165449)	FAM13C (ENSG00000148541)	PHYHIPL (ENSG00000165443)	BICC1 (ENSG00000122870)	TFAM (ENSG00000108064)	UBE2D1 (ENSG00000072401)	CISD1 (ENSG00000122873)	IPMK (ENSG00000151151)	ZWINT (ENSG00000122952)	PCDH15 (ENSG00000150275)	MBL2 (ENSG00000165471) #18	DKK1 (ENSG00000107984) #19	CSTF2T (ENSG00000177613) #21	PRKG1 (ENSG00000185532) #20	A1CF (ENSG00000148584) #22	ASAH2B (ENSG00000204147) #23	SGMS1 (ENSG00000198964) #24	ASAH2 (ENSG00000188611) #23	WASHC2A (ENSG00000099290)	AGAP6 (ENSG00000204149)	TIMM23B (ENSG00000204152)	PARG (ENSG00000227345)	OGDHL (ENSG00000197444)	C10orf53 (ENSG00000178645)	SLC18A3 (ENSG00000187714)	CHAT (ENSG00000070748)	ERCC6 (ENSG00000225830)	DRGX (ENSG00000165606)	C10orf71 (ENSG00000177354)	TMEM273 (ENSG00000204161)
Pan	ANCESTRAL SPECIES	16	ENSGT00390000014563.a.b	ENSGT00940000155426.t	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e.a	ENSGT00940000155309.f	ENSGT00390000017639	ENSGT01090000261235.b	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.b.z	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00550000076459	ENSGT00940000158306 #24	ENSGT00390000004867	ENSGT00390000015792 #23
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000048024	BICC1 (ENSPTRG00000002520)	TFAM (ENSPTRG00000048475)	UBE2D1 (ENSPTRG00000002518)	CISD1 (ENSPTRG00000002517)	IPMK (ENSPTRG00000002516)	ZWINT (ENSPTRG00000002515)	MTRNR2L5 (ENSPTRG00000047669)	PCDH15 (ENSPTRG00000048830)	MBL2 (ENSPTRG00000044979) #18	ENSPTRG00000044550	ENSPTRG00000049782	DKK1 (ENSPTRG00000002511) #19	ENSPTRG00000043097 #21	PRKG1 (ENSPTRG00000002509) #20	A1CF (ENSPTRG00000002508) #22	ENSPTRG00000045825	ENSPTRG00000048303	ENSPTRG00000050137	ENSPTRG00000043136	SGMS1 (ENSPTRG00000002502) #24	ENSPTRG00000002501 #23	ENSPTRG00000049932	ENSPTRG00000045668	ENSPTRG00000043523	ENSPTRG00000029846	ENSPTRG00000049981	ENSPTRG00000049292	NPY4R (ENSPTRG00000029894)	GPRIN2 (ENSPTRG00000029895)	ENSPTRG00000029896
Bonobo	MODERN SPECIES	1	ENSPPAG00000020860	BICC1 (ENSPPAG00000035110)	TFAM (ENSPPAG00000030193)	UBE2D1 (ENSPPAG00000036898)	CISD1 (ENSPPAG00000042695)	IPMK (ENSPPAG00000027187)	ZWINT (ENSPPAG00000038915)	ENSPPAG00000029642	MBL2 (ENSPPAG00000041167) #18	ENSPPAG00000041173	ENSPPAG00000038204	DKK1 (ENSPPAG00000034431) #19	ENSPPAG00000032242 #21	PRKG1 (ENSPPAG00000033876) #20	ENSPPAG00000043487	A1CF (ENSPPAG00000028115) #22	ENSPPAG00000043263	ENSPPAG00000011695	ENSPPAG00000011414	SGMS1 (ENSPPAG00000010279) #24	ENSPPAG00000037960 #23	ENSPPAG00000000467	ENSPPAG00000014526	GPRIN2 (ENSPPAG00000031808)	ENSPPAG00000042584	MSMB (ENSPPAG00000030880)	NCOA4 (ENSPPAG00000028269)	ZFAND4 (ENSPPAG00000043230)	MARCHF8 (ENSPPAG00000028418)	ALOX5 (ENSPPAG00000040866)	ENSPPAG00000030506
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.a.g.b	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00390000004867	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Mas night monkey	MODERN SPECIES	561								ENSANAG00000003266	PCDH15 (ENSANAG00000026007)	ENSANAG00000031269	MBL2 (ENSANAG00000029242) #18	ENSANAG00000025343	DKK1 (ENSANAG00000020791) #19	PRKG1 (ENSANAG00000026052) #20	ENSANAG00000027508 #21	A1CF (ENSANAG00000019974) #22	ENSANAG00000030762 #23	SGMS1 (ENSANAG00000020922) #24	ENSANAG00000029474	ENSANAG00000030316	ENSANAG00000030500	MINPP1 (ENSANAG00000035646)	PAPSS2 (ENSANAG00000035795)	ATAD1 (ENSANAG00000029977)	KLLN (ENSANAG00000033415)	PTEN (ENSANAG00000033430)	ENSANAG00000031741
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.e	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.a.g.b	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b
Marmoset	MODERN SPECIES	3	ENSCJAG00000085426	ENSCJAG00000054729	ENSCJAG00000076246	ZWINT (ENSCJAG00000004927)	ENSCJAG00000039838	ENSCJAG00000011637	ENSCJAG00000083700	PCDH15 (ENSCJAG00000004978)	ENSCJAG00000081722	MBL2 (ENSCJAG00000005002) #18	ENSCJAG00000022329	DKK1 (ENSCJAG00000068173) #19	PRKG1 (ENSCJAG00000005021) #20	ENSCJAG00000075784	ENSCJAG00000011554 #21	A1CF (ENSCJAG00000005045) #22	ENSCJAG00000005129 #23	SGMS1 (ENSCJAG00000005202) #24	MINPP1 (ENSCJAG00000005222)	ENSCJAG00000085482	PAPSS2 (ENSCJAG00000005236)	ATAD1 (ENSCJAG00000005296)	ENSCJAG00000061153	ENSCJAG00000040914	RNLS (ENSCJAG00000045289)	LIPF (ENSCJAG00000005360)	LIPK (ENSCJAG00000005403)	LIPN (ENSCJAG00000005432)	LIPM (ENSCJAG00000005454)	ANKRD22 (ENSCJAG00000052310)	STAMBPL1 (ENSCJAG00000005484)
Cebidae_a	ANCESTRAL SPECIES	13										ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00530000063516.a.a.c.a.g.b	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00560000078481	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b
Bolivian squirrel monkey	MODERN SPECIES	47							ENSSBOG00000015268	PCDH15 (ENSSBOG00000032410)	ENSSBOG00000031194	MBL2 (ENSSBOG00000026603) #18	ENSSBOG00000018858	DKK1 (ENSSBOG00000030483) #19	CSTF2T (ENSSBOG00000022638) #21	ENSSBOG00000028152	PRKG1 (ENSSBOG00000033755) #20	A1CF (ENSSBOG00000021930) #22	ENSSBOG00000031811 #23	SGMS1 (ENSSBOG00000024460) #24	MINPP1 (ENSSBOG00000024204)	PAPSS2 (ENSSBOG00000033811)	ENSSBOG00000032004	KLLN (ENSSBOG00000031183)	PTEN (ENSSBOG00000029496)	RNLS (ENSSBOG00000029748)	LIPJ (ENSSBOG00000031427)	LIPF (ENSSBOG00000025134)	LIPK (ENSSBOG00000034717)	LIPN (ENSSBOG00000033606)	LIPM (ENSSBOG00000032054)	ANKRD22 (ENSSBOG00000028251)	STAMBPL1 (ENSSBOG00000031643)
Capuchin	MODERN SPECIES	97				SLC5A4 (ENSCCAG00000038070)	RTCB (ENSCCAG00000000618)	BPIFC (ENSCCAG00000029912)	FBXO7 (ENSCCAG00000035118)	SYN3 (ENSCCAG00000028142)	TIMP3 (ENSCCAG00000027812)	PCDH15 (ENSCCAG00000031137)	MBL2 (ENSCCAG00000026663) #18	ENSCCAG00000022494	DKK1 (ENSCCAG00000038058) #19	PRKG1 (ENSCCAG00000033567) #20	ENSCCAG00000020816 #21	A1CF (ENSCCAG00000018168) #22	ASAH2 (ENSCCAG00000029600) #23	SGMS1 (ENSCCAG00000007356) #24	ENSCCAG00000036087	MINPP1 (ENSCCAG00000033908)	PAPSS2 (ENSCCAG00000013436)	ATAD1 (ENSCCAG00000026620)	KLLN (ENSCCAG00000036146)	PTEN (ENSCCAG00000021453)
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158678 #22
Common shrew	MODERN SPECIES	3437																A1CF (ENSSARG00000005940) #22
Hedgehog	MODERN SPECIES	4485																A1CF (ENSEEUG00000000013) #22
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000156416	ENSGT00900000143228	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000006888	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163811	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086
Suina	ANCESTRAL SPECIES	6	ENSGT00390000006888	ENSGT00390000014056	ENSGT00980000200461	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b	ENSGT00940000162142
Pig	MODERN SPECIES	5	ENSSSCG00000035762	IPMK (ENSSSCG00000040863)	ENSSSCG00000044916	ENSSSCG00000056924	ENSSSCG00000044100	ENSSSCG00000048242	ZWINT (ENSSSCG00000027984)	ENSSSCG00000043054	ENSSSCG00000010426	ENSSSCG00000053385	MBL2 (ENSSSCG00000010427) #18	DKK1 (ENSSSCG00000010428) #19	PRKG1 (ENSSSCG00000010429) #20	CSTF2T (ENSSSCG00000010430) #21	ENSSSCG00000041250	A1CF (ENSSSCG00000010431) #22	ENSSSCG00000010432 #23	SGMS1 (ENSSSCG00000010433) #24	MINPP1 (ENSSSCG00000010435)	PAPSS2 (ENSSSCG00000010437)	ATAD1 (ENSSSCG00000062685)	ENSSSCG00000059571	ENSSSCG00000010440	RNLS (ENSSSCG00000023141)	LIPN (ENSSSCG00000031373)	LIPM (ENSSSCG00000010444)	ANKRD22 (ENSSSCG00000010445)	STAMBPL1 (ENSSSCG00000010446)	ACTA2 (ENSSSCG00000010447)	FAS (ENSSSCG00000010448)	ENSSSCG00000041185
Chacoan peccary	MODERN SPECIES	199	ENSCWAG00000021609	ZNF32 (ENSCWAG00000021604)	ZNF239 (ENSCWAG00000021599)	TFAM (ENSCWAG00000021595)	UBE2D1 (ENSCWAG00000021587)	ENSCWAG00000021580	ENSCWAG00000021576	IPMK (ENSCWAG00000021573)	ZWINT (ENSCWAG00000021563)	PCDH15 (ENSCWAG00000012522)	MBL2 (ENSCWAG00000011807) #18	DKK1 (ENSCWAG00000011767) #19	CSTF2T (ENSCWAG00000011747) #21	ENSCWAG00000011709	PRKG1 (ENSCWAG00000011228) #20	A1CF (ENSCWAG00000011006) #22	ENSCWAG00000010046 #23	SGMS1 (ENSCWAG00000009915) #24	MINPP1 (ENSCWAG00000009841)	PAPSS2 (ENSCWAG00000009769)	ATAD1 (ENSCWAG00000009714)	PTEN (ENSCWAG00000009679)	RNLS (ENSCWAG00000009621)	LIPK (ENSCWAG00000009544)	LIPN (ENSCWAG00000009461)	LIPM (ENSCWAG00000009317)	ANKRD22 (ENSCWAG00000009235)	ACTA2 (ENSCWAG00000009181)	STAMBPL1 (ENSCWAG00000008940)	FAS (ENSCWAG00000008900)	CH25H (ENSCWAG00000008878)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000006888	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163811	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000017909	ENSGT00390000006888	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Cetacea	ANCESTRAL SPECIES	15	ENSGT00390000006888	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000010218.e.a	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00940000162764.A.a.b.a	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000010218.e.a	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Sperm whale	MODERN SPECIES	12	ZNF32 (ENSPCTG00005014760)	ZNF239 (ENSPCTG00005014819)	ENSPCTG00005014841	TFAM (ENSPCTG00005014865)	UBE2D1 (ENSPCTG00005014923)	CISD1 (ENSPCTG00005015047)	IPMK (ENSPCTG00005010254)	ENSPCTG00005010423	ZWINT (ENSPCTG00005010463)	PCDH15 (ENSPCTG00005011144)	ENSPCTG00005018136	DKK1 (ENSPCTG00005018205) #19	PRKG1 (ENSPCTG00005018319) #20	CSTF2T (ENSPCTG00005018419) #21	ENSPCTG00005018439	A1CF (ENSPCTG00005018564) #22	ENSPCTG00005018899 #23	SGMS1 (ENSPCTG00005019629) #24	MINPP1 (ENSPCTG00005019668)	PAPSS2 (ENSPCTG00005019760)	ATAD1 (ENSPCTG00005019823)	PTEN (ENSPCTG00005019852)	RNLS (ENSPCTG00005019880)	ENSPCTG00005019926	LIPF (ENSPCTG00005019974)	LIPN (ENSPCTG00005020102)	LIPM (ENSPCTG00005020133)	ANKRD22 (ENSPCTG00005020200)	STAMBPL1 (ENSPCTG00005020236)	ACTA2 (ENSPCTG00005020294)	FAS (ENSPCTG00005020359)
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00940000162764.A.a.b.a	ENSGT00440000039001.u	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000010218.e.a	ENSGT00390000017639.a	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Dolphin	MODERN SPECIES	6251																A1CF (ENSTTRG00000013190) #22
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00940000162764.A.a.b.a	ENSGT00440000039001.u	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000010218.e.a	ENSGT00390000017639.a	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00940000162764.A.a.b.a	ENSGT00440000039001.u	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000010218.e.a	ENSGT00390000017639.a	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Beluga whale	MODERN SPECIES	65	ZNF239 (ENSDLEG00000009554)	TFAM (ENSDLEG00000009540)	UBE2D1 (ENSDLEG00000009524)	CISD1 (ENSDLEG00000009517)	ENSDLEG00000009505	IPMK (ENSDLEG00000009483)	ENSDLEG00000009452	ENSDLEG00000009407	ENSDLEG00000009401	PCDH15 (ENSDLEG00000009330)	MBL2 (ENSDLEG00000009284) #18	DKK1 (ENSDLEG00000009271) #19	PRKG1 (ENSDLEG00000009138) #20	CSTF2T (ENSDLEG00000009110) #21	ENSDLEG00000009100 #20	A1CF (ENSDLEG00000008974) #22	ASAH2 (ENSDLEG00000008423) #23	SGMS1 (ENSDLEG00000008315) #24	MINPP1 (ENSDLEG00000008121)	ATAD1 (ENSDLEG00000008067)	ENSDLEG00000008057	ENSDLEG00000008046	ENSDLEG00000008034	LIPF (ENSDLEG00000007994)	LIPK (ENSDLEG00000007972)	LIPN (ENSDLEG00000007954)	LIPM (ENSDLEG00000007943)	ANKRD22 (ENSDLEG00000021832)	STAMBPL1 (ENSDLEG00000021830)	ACTA2 (ENSDLEG00000021829)	FAS (ENSDLEG00000021827)
Narwhal	MODERN SPECIES	311	ENSMMNG00015011197	TFAM (ENSMMNG00015011214)	UBE2D1 (ENSMMNG00015011237)	CISD1 (ENSMMNG00015011257)	IPMK (ENSMMNG00015011269)	ENSMMNG00015011280	ENSMMNG00015011291	ENSMMNG00015011307	ENSMMNG00015011311	ENSMMNG00015011328	PCDH15 (ENSMMNG00015011987)	MBL2 (ENSMMNG00015013230) #18	DKK1 (ENSMMNG00015013243) #19	PRKG1 (ENSMMNG00015013265) #20	CSTF2T (ENSMMNG00015013297) #21	A1CF (ENSMMNG00015013332) #22	ENSMMNG00015013453 #23	SGMS1 (ENSMMNG00015013583) #24	MINPP1 (ENSMMNG00015013624)	PAPSS2 (ENSMMNG00015013664)	ATAD1 (ENSMMNG00015013697)	PTEN (ENSMMNG00015013721)	RNLS (ENSMMNG00015013738)	LIPF (ENSMMNG00015013755)	LIPK (ENSMMNG00015013791)	LIPN (ENSMMNG00015013810)	LIPM (ENSMMNG00015013823)	ANKRD22 (ENSMMNG00015013839)	STAMBPL1 (ENSMMNG00015013850)	ACTA2 (ENSMMNG00015013862)	FAS (ENSMMNG00015013934)
Vaquita	MODERN SPECIES	7	TFAM (ENSPSNG00000018870)	UBE2D1 (ENSPSNG00000018916)	CISD1 (ENSPSNG00000019002)	IPMK (ENSPSNG00000019047)	ENSPSNG00000019117	ENSPSNG00000019148	ENSPSNG00000019167	ENSPSNG00000019201	ENSPSNG00000019266	ENSPSNG00000019365	MBL2 (ENSPSNG00000019440) #18	DKK1 (ENSPSNG00000019485) #19	PRKG1 (ENSPSNG00000019539) #20	CSTF2T (ENSPSNG00000019704) #21	ENSPSNG00000019723	A1CF (ENSPSNG00000019768) #22	ENSPSNG00000019925 #23	SGMS1 (ENSPSNG00000020042) #24	ENSPSNG00000020083	MINPP1 (ENSPSNG00000020186)	PAPSS2 (ENSPSNG00000020125)	ATAD1 (ENSPSNG00000020236)	PTEN (ENSPSNG00000020260)	RNLS (ENSPSNG00000020289)	LIPK (ENSPSNG00000020318)	LIPN (ENSPSNG00000020364)	LIPM (ENSPSNG00000020410)	ANKRD22 (ENSPSNG00000020462)	STAMBPL1 (ENSPSNG00000020503)	ACTA2 (ENSPSNG00000020576)	FAS (ENSPSNG00000020648)
Blue whale	MODERN SPECIES	7	TFAM (ENSBMSG00010022298)	UBE2D1 (ENSBMSG00010022297)	CISD1 (ENSBMSG00010022294)	IPMK (ENSBMSG00010022292)	ENSBMSG00010022289	ZWINT (ENSBMSG00010022285)	ENSBMSG00010022283	PCDH15 (ENSBMSG00010015071)	ENSBMSG00010022262	MBL2 (ENSBMSG00010022259) #18	DKK1 (ENSBMSG00010022257) #19	CSTF2T (ENSBMSG00010022255) #21	ENSBMSG00010022253	PRKG1 (ENSBMSG00010022250) #20	ENSBMSG00010022247	A1CF (ENSBMSG00010022244) #22	ENSBMSG00010022229 #23	SGMS1 (ENSBMSG00010022213) #24	MINPP1 (ENSBMSG00010022209)	PAPSS2 (ENSBMSG00010022207)	ATAD1 (ENSBMSG00010022204)	ENSBMSG00010022202	PTEN (ENSBMSG00010022200)	RNLS (ENSBMSG00010022196)	LIPJ (ENSBMSG00010022192)	LIPF (ENSBMSG00010022190)	LIPK (ENSBMSG00010022187)	LIPN (ENSBMSG00010022184)	LIPM (ENSBMSG00010022182)	ANKRD22 (ENSBMSG00010022180)	STAMBPL1 (ENSBMSG00010022177)
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000017909	ENSGT00390000006888	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Yarkand deer	MODERN SPECIES	6	TFAM (ENSCHYG00000014373)	UBE2D1 (ENSCHYG00000014588)	ENSCHYG00000014766	IPMK (ENSCHYG00000014823)	ENSCHYG00000014885	ENSCHYG00000014967	ENSCHYG00000015018	ZWINT (ENSCHYG00000015081)	PCDH15 (ENSCHYG00000016362)	MBL2 (ENSCHYG00000026257) #18	ENSCHYG00000026268	DKK1 (ENSCHYG00000026293) #19	PRKG1 (ENSCHYG00000026330) #20	CSTF2T (ENSCHYG00000026423) #21	ENSCHYG00000026429	A1CF (ENSCHYG00000026440) #22	ENSCHYG00000026464 #23	ENSCHYG00000026584	SGMS1 (ENSCHYG00000026602) #24	MINPP1 (ENSCHYG00000026614)	PAPSS2 (ENSCHYG00000026630)	ATAD1 (ENSCHYG00000026673)	ENSCHYG00000026694	RNLS (ENSCHYG00000026700)	LIPJ (ENSCHYG00000026713)	ENSCHYG00000026720	ENSCHYG00000026727	LIPK (ENSCHYG00000026737)	LIPN (ENSCHYG00000026743)	LIPM (ENSCHYG00000026759)	ANKRD22 (ENSCHYG00000026783)
Percora_a	ANCESTRAL SPECIES	14	ENSGT00390000006888	ENSGT00390000014056	ENSGT00940000153582.b.a.b	ENSGT00940000163366	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT01100000263976.b	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Bovidae	ANCESTRAL SPECIES	24							ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT01100000263976.b	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Bovinae	ANCESTRAL SPECIES	22					ENSGT00940000153272.a.b.z.a.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT01100000263976.b	ENSGT00390000017639.d	ENSGT00390000007918.g.a.c	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Bos	ANCESTRAL SPECIES	23						ENSGT00940000153272.a.b.z.a.a.b.a	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639.d	ENSGT00390000007918.g.a.c	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Bos_b	ANCESTRAL SPECIES	23		ENSGT01100000263496.D.b.a.e.s	ENSGT00940000161841.i.a.b.b.b	ENSGT00940000153272.a.b.z.a.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00940000154319.v.bb.a	ENSGT00960000193206	ENSGT00390000017639.d	ENSGT00390000007918.g.a.c	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Cow	MODERN SPECIES	18	ENSBTAG00000046109	UBE2D1 (ENSBTAG00000020796)	ENSBTAG00000055208	CISD1 (ENSBTAG00000003634)	IPMK (ENSBTAG00000011197)	ENSBTAG00000055115	ENSBTAG00000052774	ZWINT (ENSBTAG00000002655)	ENSBTAG00000053625	PCDH15 (ENSBTAG00000045905)	ENSBTAG00000039406	MBL2 (ENSBTAG00000007049) #18	DKK1 (ENSBTAG00000014218)	PRKG1 (ENSBTAG00000018404) #20	CSTF2T (ENSBTAG00000018406) #21	A1CF (ENSBTAG00000021195) #22	ENSBTAG00000003529 #23	SGMS1 (ENSBTAG00000011748) #24	MINPP1 (ENSBTAG00000005928)	ENSBTAG00000051961	PAPSS2 (ENSBTAG00000003196)	ATAD1 (ENSBTAG00000000806)	PTEN (ENSBTAG00000009498)	RNLS (ENSBTAG00000054881)	LIPJ (ENSBTAG00000038063)	LIPF (ENSBTAG00000006445)	LIPK (ENSBTAG00000039234)	LIPN (ENSBTAG00000024911)	LIPM (ENSBTAG00000013364)	ANKRD22 (ENSBTAG00000013368)	ENSBTAG00000048462
Hybrid Bos Indicus	MODERN SPECIES	18	ENSBIXG00005005677	ENSBIXG00005021345	ENSBIXG00005021364	IPMK (ENSBIXG00005021379)	ENSBIXG00005021396	ENSBIXG00005021417	ENSBIXG00005021433	PCDH15 (ENSBIXG00005021814)	MBL2 (ENSBIXG00005021951) #18	DKK1 (ENSBIXG00005021979) #19	CSTF2T (ENSBIXG00005021991) #21	ENSBIXG00005021994	ENSBIXG00005022005	PRKG1 (ENSBIXG00005022044) #20	ENSBIXG00005022067	A1CF (ENSBIXG00005022105) #22	ENSBIXG00005022908 #23	SGMS1 (ENSBIXG00005023052) #24	MINPP1 (ENSBIXG00005007693)	PAPSS2 (ENSBIXG00005007618)	ATAD1 (ENSBIXG00005023232)	ENSBIXG00005023308	RNLS (ENSBIXG00005023409)	LIPJ (ENSBIXG00005023465)	ENSBIXG00005023480	ENSBIXG00005023499	LIPF (ENSBIXG00005004025)	LIPK (ENSBIXG00005006003)	LIPN (ENSBIXG00005023578)	LIPM (ENSBIXG00005023619)	ENSBIXG00005004044
Bos_a	ANCESTRAL SPECIES	17					ENSGT00940000155109.b	ENSGT00940000153272.a.b.z.a.a.b.a	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639.d	ENSGT00390000007918.g.a.c	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Wild yak	MODERN SPECIES	1687													DKK1 (ENSBMUG00000009308) #19	ENSBMUG00000009303 #21	PRKG1 (ENSBMUG00000009284) #20	A1CF (ENSBMUG00000009224) #22	ENSBMUG00000009207 #23
Domestic yak	MODERN SPECIES	17	ENSBGRG00000013005	CISD1 (ENSBGRG00000013040)	IPMK (ENSBGRG00000013097)	ENSBGRG00000013161	ENSBGRG00000013192	ENSBGRG00000013227	PCDH15 (ENSBGRG00000013379)	ENSBGRG00000017547	MBL2 (ENSBGRG00000017581) #18	DKK1 (ENSBGRG00000017698) #19	PRKG1 (ENSBGRG00000017754) #20	CSTF2T (ENSBGRG00000018087) #21	ENSBGRG00000018111	ENSBGRG00000018137	ENSBGRG00000018168	A1CF (ENSBGRG00000018206) #22	ENSBGRG00000018387	ENSBGRG00000018416 #23	SGMS1 (ENSBGRG00000019263) #24	ENSBGRG00000019392	MINPP1 (ENSBGRG00000019420)	PAPSS2 (ENSBGRG00000019556)	ATAD1 (ENSBGRG00000019725)	ENSBGRG00000019927	RNLS (ENSBGRG00000020012)	LIPJ (ENSBGRG00000015956)	LIPF (ENSBGRG00000016129)	LIPK (ENSBGRG00000016522)	LIPN (ENSBGRG00000016587)	LIPM (ENSBGRG00000016688)	ANKRD22 (ENSBGRG00000016894)
American bison	MODERN SPECIES	2599													DKK1 (ENSBBBG00000022971) #19	CSTF2T (ENSBBBG00000008534) #21	PRKG1 (ENSBBBG00000023110) #20	A1CF (ENSBBBG00000000479) #22	ENSBBBG00000023205 #23	SGMS1 (ENSBBBG00000023234) #24	MINPP1 (ENSBBBG00000023253)
Caprinae	ANCESTRAL SPECIES	19		ENSGT01100000263496.D.b.a.e.s	ENSGT01100000263496.C.c.b.c.b.h.a.b.b	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00940000154612.n	ENSGT00390000008403.cb.a.b	ENSGT00940000154319.v.bb.a	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066.c	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Goat	MODERN SPECIES	18	ENSCHIG00000015036	ENSCHIG00000020599	ZWINT (ENSCHIG00000015390)	CYP2C321 (ENSCHIG00000011538)	CYP2C320 (ENSCHIG00000013857)	ENSCHIG00000022550	ENSCHIG00000018263	PCDH15 (ENSCHIG00000019596)	MBL2 (ENSCHIG00000015204) #18	ENSCHIG00000022320	DKK1 (ENSCHIG00000014847) #19	PRKG1 (ENSCHIG00000012195) #20	CSTF2T (ENSCHIG00000016590) #21	ENSCHIG00000022231 #20	ENSCHIG00000017757	A1CF (ENSCHIG00000020411) #22	ENSCHIG00000015705 #23	SGMS1 (ENSCHIG00000021067) #24	MINPP1 (ENSCHIG00000012963)	PAPSS2 (ENSCHIG00000013444)	ENSCHIG00000020310	ENSCHIG00000006638	ENSCHIG00000020422	ENSCHIG00000017631	LIPJ (ENSCHIG00000012756)	ENSCHIG00000020531	ENSCHIG00000016000	ENSCHIG00000001835	LIPK (ENSCHIG00000019246)	LIPN (ENSCHIG00000007760)	LIPM (ENSCHIG00000020369)
Rambouillet Sheep	MODERN SPECIES	14	IPMK (ENSOARG00020020757)	ENSOARG00020020809	ENSOARG00020020847	ENSOARG00020020877	ENSOARG00020020887	ENSOARG00020020901	ZWINT (ENSOARG00020020930)	ENSOARG00020020974	ENSOARG00020020992	PCDH15 (ENSOARG00020021117)	MBL2 (ENSOARG00020022394) #18	ENSOARG00020022444	DKK1 (ENSOARG00020022468) #19	PRKG1 (ENSOARG00020022501) #20	ENSOARG00020022793 #21	A1CF (ENSOARG00020022812) #22	ASAH2 (ENSOARG00020006394) #23	MINPP1 (ENSOARG00020006903)	SGMS1 (ENSOARG00020006993) #24	PAPSS2 (ENSOARG00020007102)	ATAD1 (ENSOARG00020007317)	PTEN (ENSOARG00020007451)	RNLS (ENSOARG00020007497)	LIPJ (ENSOARG00020007569)	ENSOARG00020007648	ENSOARG00020007707	LIPK (ENSOARG00020007908)	LIPN (ENSOARG00020007970)	LIPM (ENSOARG00020008055)	ANKRD22 (ENSOARG00020008170)	STAMBPL1 (ENSOARG00020008275)
Siberian musk deer	MODERN SPECIES	1164													ENSMMSG00000013381 #19	ENSMMSG00000013354	PRKG1 (ENSMMSG00000013296) #20	A1CF (ENSMMSG00000013207) #22	ENSMMSG00000012995 #23	MINPP1 (ENSMMSG00000012960)	ENSMMSG00000012952	PAPSS2 (ENSMMSG00000012899)	ENSMMSG00000012867	ENSMMSG00000012833	ENSMMSG00000012811
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086
Arabian camel	MODERN SPECIES	2	ENSCDRG00005012336	ENSCDRG00005012310	SLC16A9 (ENSCDRG00005012271)	FAM13C (ENSCDRG00005012055)	PHYHIPL (ENSCDRG00005011949)	BICC1 (ENSCDRG00005011562)	UBE2D1 (ENSCDRG00005011425)	CISD1 (ENSCDRG00005011386)	IPMK (ENSCDRG00005011329)	ZWINT (ENSCDRG00005011236)	ENSCDRG00005011179	PCDH15 (ENSCDRG00005009621)	MBL2 (ENSCDRG00005009406) #18	DKK1 (ENSCDRG00005009335) #19	PRKG1 (ENSCDRG00005009001) #20	A1CF (ENSCDRG00005008743) #22	ENSCDRG00005008481 #23	SGMS1 (ENSCDRG00005008417) #24	PAPSS2 (ENSCDRG00005007937)	ATAD1 (ENSCDRG00005007858)	PTEN (ENSCDRG00005007749)	RNLS (ENSCDRG00005007701)	LIPJ (ENSCDRG00005007645)	LIPF (ENSCDRG00005007510)	LIPK (ENSCDRG00005007417)	LIPN (ENSCDRG00005007375)	LIPM (ENSCDRG00005007263)	ANKRD22 (ENSCDRG00005007227)	ACTA2 (ENSCDRG00005007102)	STAMBPL1 (ENSCDRG00005006996)	FAS (ENSCDRG00005006938)
Alpaca	MODERN SPECIES	2763														CSTF2T (ENSVPAG00000006134) #21	PRKG1 (ENSVPAG00000006132) #20	A1CF (ENSVPAG00000006130) #22	ENSVPAG00000006129 #23
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.d	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086
Chiroptera	ANCESTRAL SPECIES	6	ENSGT01100000266276	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.d	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000167957	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00390000013086
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT01100000266276	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.d	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000167957	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Greater horseshoe bat	MODERN SPECIES	7	UBE2D1 (ENSRFEG00010021904)	CISD1 (ENSRFEG00010021897)	IPMK (ENSRFEG00010021894)	ENSRFEG00010021886	ENSRFEG00010021878	ENSRFEG00010021868	ENSRFEG00010021865	PCDH15 (ENSRFEG00010021032)	ENSRFEG00010020418	ENSRFEG00010020396	MBL2 (ENSRFEG00010020367) #18	DKK1 (ENSRFEG00010020338) #19	CSTF2T (ENSRFEG00010020325) #21	ENSRFEG00010020300	PRKG1 (ENSRFEG00010020166) #20	A1CF (ENSRFEG00010020111) #22	ENSRFEG00010019865 #23	SGMS1 (ENSRFEG00010019788) #24	ENSRFEG00010019748	MINPP1 (ENSRFEG00010019675)	ENSRFEG00010019643	PAPSS2 (ENSRFEG00010019528)	ATAD1 (ENSRFEG00010019472)	PTEN (ENSRFEG00010019405)	RNLS (ENSRFEG00010019358)	LIPK (ENSRFEG00010019342)	LIPM (ENSRFEG00010019214)	ANKRD22 (ENSRFEG00010019181)	ACTA2 (ENSRFEG00010019133)	STAMBPL1 (ENSRFEG00010019067)	ENSRFEG00010019037
Microbat	MODERN SPECIES	1440															ENSMLUG00000028625	A1CF (ENSMLUG00000016071) #22	ENSMLUG00000016788 #23
Equus	ANCESTRAL SPECIES	9	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a.e	ENSGT00940000155309	ENSGT00390000017639	ENSGT01040000243572	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066.f	ENSGT00940000161066.e.a	ENSGT00940000161066.e.b	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005
Donkey	MODERN SPECIES	11	TFAM (ENSEASG00005032581)	UBE2D1 (ENSEASG00005013766)	ENSEASG00005032662	IPMK (ENSEASG00005013756)	ENSEASG00005030948	ZWINT (ENSEASG00005013748)	ENSEASG00005013739	PCDH15 (ENSEASG00005013135)	ENSEASG00005013096	MBL2 (ENSEASG00005013094) #18	DKK1 (ENSEASG00005025908) #19	PRKG1 (ENSEASG00005012942) #20	ENSEASG00005013091	CSTF2T (ENSEASG00005012929) #21	ENSEASG00005012927 #20	ENSEASG00005012924 #22	ENSEASG00005012474 #23	ENSEASG00005012417 #24	ENSEASG00005012408	PAPSS2 (ENSEASG00005012399)	ATAD1 (ENSEASG00005012394)	ENSEASG00005012374	RNLS (ENSEASG00005012372)	LIPJ (ENSEASG00005012370)	ENSEASG00005030220	ENSEASG00005012327	ENSEASG00005012364	LIPK (ENSEASG00005012312)	LIPN (ENSEASG00005012307)	LIPM (ENSEASG00005012301)	ANKRD22 (ENSEASG00005012297)
Horse	MODERN SPECIES		CISD1 (ENSECAG00000008892)	IPMK (ENSECAG00000008002)	ENSECAG00000007551	ZWINT (ENSECAG00000000633)	ENSECAG00000054458	ENSECAG00000021793	ENSECAG00000056820	PCDH15 (ENSECAG00000019573)	MBL2 (ENSECAG00000018357) #18	DKK1 (ENSECAG00000017837) #19	PRKG1 (ENSECAG00000014017) #20	ENSECAG00000054736	CSTF2T (ENSECAG00000004701) #21	ENSECAG00000059782	ENSECAG00000056034 #20	A1CF (ENSECAG00000010424) #22	ASAH2 (ENSECAG00000006259) #23	SGMS1 (ENSECAG00000000125) #24	MINPP1 (ENSECAG00000012951)	ENSECAG00000049908	PAPSS2 (ENSECAG00000008426)	ATAD1 (ENSECAG00000000473)	PTEN (ENSECAG00000017012)	RNLS (ENSECAG00000015523)	LIPJ (ENSECAG00000014492)	ENSECAG00000013917	ENSECAG00000009983	ENSECAG00000008026	LIPK (ENSECAG00000007409)	LIPM (ENSECAG00000022367)	ANKRD22 (ENSECAG00000022239)
Carnivora	ANCESTRAL SPECIES	16	ENSGT00390000013594	ENSGT01100000264127	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Caniformia	ANCESTRAL SPECIES	13											ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Caniformia_b	ANCESTRAL SPECIES	10											ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Ursidae	ANCESTRAL SPECIES	5										ENSGT00950000185677	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Ursus	ANCESTRAL SPECIES	128										ENSGT00950000185677	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
American black bear	MODERN SPECIES	5568																A1CF (ENSUAMG00000020065) #22	ENSUAMG00000020064 #23
Polar bear	MODERN SPECIES	160	ENSUMAG00000006867	ARID4B (ENSUMAG00000006905)	GGPS1 (ENSUMAG00000007160)	TBCE (ENSUMAG00000007171)	B3GALNT2 (ENSUMAG00000007179)	GNG4 (ENSUMAG00000007188)	LYST (ENSUMAG00000007493)	NID1 (ENSUMAG00000009613)	ENSUMAG00000009638	ZWINT (ENSUMAG00000009645)	PCDH15 (ENSUMAG00000009851)	DKK1 (ENSUMAG00000010974) #19	PRKG1 (ENSUMAG00000011015) #20	CSTF2T (ENSUMAG00000011141) #21	ENSUMAG00000011145 #20	A1CF (ENSUMAG00000011162) #22	ENSUMAG00000011188 #23	SGMS1 (ENSUMAG00000011285) #24	ENSUMAG00000011294	PAPSS2 (ENSUMAG00000011450)	ATAD1 (ENSUMAG00000012300)	ENSUMAG00000012311	RNLS (ENSUMAG00000012352)	LIPJ (ENSUMAG00000012354)	LIPF (ENSUMAG00000012359)	LIPK (ENSUMAG00000012365)	LIPN (ENSUMAG00000012370)	LIPM (ENSUMAG00000012378)	ANKRD22 (ENSUMAG00000012384)	STAMBPL1 (ENSUMAG00000012390)	ACTA2 (ENSUMAG00000012394)
Giant Panda	MODERN SPECIES	16	ABHD12 (ENSAMEG00000003400)	PYGB (ENSAMEG00000003436)	ENSAMEG00000003561	ACSS1 (ENSAMEG00000014206)	APMAP (ENSAMEG00000014230)	CST7 (ENSAMEG00000014248)	ENSAMEG00000000530	ENSAMEG00000030010	ENSAMEG00000030632	ENSAMEG00000005342	PCDH15 (ENSAMEG00000015978)	ENSAMEG00000025693	DKK1 (ENSAMEG00000003369) #19	PRKG1 (ENSAMEG00000003362) #20	CSTF2T (ENSAMEG00000028492) #21	ENSAMEG00000000523 #22	ENSAMEG00000000551 #23	ENSAMEG00000000577 #24	ENSAMEG00000000595	ENSAMEG00000000606	ATAD1 (ENSAMEG00000000672)	PTEN (ENSAMEG00000000698)	RNLS (ENSAMEG00000000722)	LIPJ (ENSAMEG00000000731)	LIPF (ENSAMEG00000000736)	LIPK (ENSAMEG00000000784)	LIPN (ENSAMEG00000000798)	LIPM (ENSAMEG00000000799)	ANKRD22 (ENSAMEG00000000870)	STAMBPL1 (ENSAMEG00000000883)	ACTA2 (ENSAMEG00000000907)
Mustelinae	ANCESTRAL SPECIES	172											ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066
American mink	MODERN SPECIES	191													DKK1 (ENSNVIG00000023993) #19	CSTF2T (ENSNVIG00000023991) #21	PRKG1 (ENSNVIG00000023989) #20	A1CF (ENSNVIG00000023985) #22	ENSNVIG00000023980 #23	ENSNVIG00000023979	SGMS1 (ENSNVIG00000023977) #24	MINPP1 (ENSNVIG00000023974)	PAPSS2 (ENSNVIG00000023973)	ATAD1 (ENSNVIG00000023972)	PTEN (ENSNVIG00000023968)	RNLS (ENSNVIG00000023967)	LIPJ (ENSNVIG00000023965)	LIPF (ENSNVIG00000023963)
Ferret	MODERN SPECIES	264									ZWINT (ENSMPUG00000016895)	PCDH15 (ENSMPUG00000016898)	ENSMPUG00000016964	DKK1 (ENSMPUG00000016966) #19	PRKG1 (ENSMPUG00000016968) #20	CSTF2T (ENSMPUG00000020141) #21	ENSMPUG00000016970	A1CF (ENSMPUG00000016971) #22	ENSMPUG00000016973 #23	SGMS1 (ENSMPUG00000016976) #24	ENSMPUG00000016981	ENSMPUG00000020142	MINPP1 (ENSMPUG00000016983)	PAPSS2 (ENSMPUG00000016990)	ATAD1 (ENSMPUG00000016993)	ENSMPUG00000016994
Canidae	ANCESTRAL SPECIES	70											ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Canis_lupus	ANCESTRAL SPECIES	43	ENSGT00390000004807	ENSGT00940000153189.A	ENSGT00940000161453	ENSGT00940000156771	ENSGT00950000183014.f.a.h.r	ENSGT00940000158884	ENSGT00940000156516	ENSGT01030000234531.A.a.db	ENSGT01090000260046.e.b.b.a.b.a.a.b.b.b.b.b.a.a.b.a.a.a.b.b.b	ENSGT00390000017639	ENSGT00940000156675	ENSGT00390000008276.s	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Dingo	MODERN SPECIES	314						ENSCAFG00020026618	ZWINT (ENSCAFG00020026601)	ENSCAFG00020026588	PCDH15 (ENSCAFG00020026437)	ENSCAFG00020026429	DKK1 (ENSCAFG00020026428) #19	PRKG1 (ENSCAFG00020026427) #20	CSTF2T (ENSCAFG00020026426) #21	ENSCAFG00020026425 #20	ENSCAFG00020026424	A1CF (ENSCAFG00020026421) #22	ENSCAFG00020026394 #23	SGMS1 (ENSCAFG00020026380) #24	MINPP1 (ENSCAFG00020026367)	PAPSS2 (ENSCAFG00020026146)	ATAD1 (ENSCAFG00020026105)	ENSCAFG00020026101	RNLS (ENSCAFG00020026098)	LIPJ (ENSCAFG00020026085)	LIPF (ENSCAFG00020026084)	LIPK (ENSCAFG00020026082)	LIPN (ENSCAFG00020026081)	LIPM (ENSCAFG00020026078)	ANKRD22 (ENSCAFG00020026075)	STAMBPL1 (ENSCAFG00020026069)	ACTA2 (ENSCAFG00020026066)
Dog	MODERN SPECIES	18	PPIL2 (ENSCAFG00845026106)	YPEL1 (ENSCAFG00845026237)	MAPK1 (ENSCAFG00845026389)	ENSCAFG00845026492	PPM1F (ENSCAFG00845026555)	TOP3B (ENSCAFG00845026653)	ENSCAFG00845026784	ENSCAFG00845026842	ENSCAFG00845027154	ENSCAFG00845027323	PCDH15 (ENSCAFG00845027622)	ENSCAFG00845028393	DKK1 (ENSCAFG00845028436) #19	PRKG1 (ENSCAFG00845028591) #20	CSTF2T (ENSCAFG00845028745) #21	A1CF (ENSCAFG00845028778) #22	ASAH2 (ENSCAFG00845028926) #23	SGMS1 (ENSCAFG00845029103) #24	ENSCAFG00845029171	ENSCAFG00845029238	ATAD1 (ENSCAFG00845029330)	PTEN (ENSCAFG00845029443)	RNLS (ENSCAFG00845029499)	ENSCAFG00845029555	LIPF (ENSCAFG00845029584)	LIPK (ENSCAFG00845029616)	LIPN (ENSCAFG00845029649)	LIPM (ENSCAFG00845029667)	ANKRD22 (ENSCAFG00845029709)	STAMBPL1 (ENSCAFG00845029757)	ACTA2 (ENSCAFG00845029801)
Red fox	MODERN SPECIES	105									ZWINT (ENSVVUG00000009322)	PCDH15 (ENSVVUG00000004464)	DKK1 (ENSVVUG00000004270) #19	PRKG1 (ENSVVUG00000002659) #20	CSTF2T (ENSVVUG00000002575) #21	ENSVVUG00000002557 #20	ENSVVUG00000002548	A1CF (ENSVVUG00000002504) #22	ENSVVUG00000002487 #23	ENSVVUG00000002466	SGMS1 (ENSVVUG00000002441) #24	MINPP1 (ENSVVUG00000002428)	PAPSS2 (ENSVVUG00000001624)	ATAD1 (ENSVVUG00000001557)	ENSVVUG00000001490	RNLS (ENSVVUG00000001422)	LIPJ (ENSVVUG00000001344)	LIPF (ENSVVUG00000001325)	LIPK (ENSVVUG00000001302)	LIPN (ENSVVUG00000001274)	LIPM (ENSVVUG00000022781)	ANKRD22 (ENSVVUG00000022777)	STAMBPL1 (ENSVVUG00000022772)
Felidae	ANCESTRAL SPECIES	14	ENSGT00390000013594	ENSGT01100000264127	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Panthera	ANCESTRAL SPECIES	8	ENSGT00390000013594	ENSGT01100000264127	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00390000013594	ENSGT01100000264127	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000161661 #21	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
leopard	MODERN SPECIES	129													DKK1 (ENSPPRG00000011627) #19	CSTF2T (ENSPPRG00000018659) #21	PRKG1 (ENSPPRG00000011763) #20	A1CF (ENSPPRG00000012180) #22	ENSPPRG00000012573 #23	SGMS1 (ENSPPRG00000012692) #24	MINPP1 (ENSPPRG00000012884)	PAPSS2 (ENSPPRG00000013028)	ATAD1 (ENSPPRG00000013082)	PTEN (ENSPPRG00000013181)	RNLS (ENSPPRG00000013242)	LIPJ (ENSPPRG00000013293)	LIPF (ENSPPRG00000013455)	LIPK (ENSPPRG00000013508)	LIPN (ENSPPRG00000013548)	LIPM (ENSPPRG00000013576)	ANKRD22 (ENSPPRG00000013634)	STAMBPL1 (ENSPPRG00000013722)	ACTA2 (ENSPPRG00000013881)
lion	MODERN SPECIES	11	CCDC6 (ENSPLOG00000021341)	ENSPLOG00000021359	SLC16A9 (ENSPLOG00000021376)	FAM13C (ENSPLOG00000021430)	PHYHIPL (ENSPLOG00000021646)	BICC1 (ENSPLOG00000021679)	TFAM (ENSPLOG00000021724)	UBE2D1 (ENSPLOG00000021767)	CISD1 (ENSPLOG00000021801)	IPMK (ENSPLOG00000021819)	ZWINT (ENSPLOG00000021893)	PCDH15 (ENSPLOG00000022349)	DKK1 (ENSPLOG00000022667) #19	PRKG1 (ENSPLOG00000022669) #20	CSTF2T (ENSPLOG00000022670) #21	A1CF (ENSPLOG00000022673) #22	ENSPLOG00000022690 #23	SGMS1 (ENSPLOG00000022705) #24	MINPP1 (ENSPLOG00000011089)	PAPSS2 (ENSPLOG00000011175)	ATAD1 (ENSPLOG00000011380)	PTEN (ENSPLOG00000011491)	RNLS (ENSPLOG00000011518)	LIPJ (ENSPLOG00000011664)	LIPF (ENSPLOG00000012276)	LIPK (ENSPLOG00000012367)	LIPN (ENSPLOG00000012456)	LIPM (ENSPLOG00000012499)	ANKRD22 (ENSPLOG00000012656)	STAMBPL1 (ENSPLOG00000012720)	ACTA2 (ENSPLOG00000012776)
Tiger	MODERN SPECIES	579												ZWINT (ENSPTIG00000018012)	PCDH15 (ENSPTIG00000020066)	PRKG1 (ENSPTIG00000020429) #20	CSTF2T (ENSPTIG00000021145) #21	A1CF (ENSPTIG00000021223) #22	ENSPTIG00000005590 #23
Cat	MODERN SPECIES	242										ENSFCAG00000052669	ZWINT (ENSFCAG00000029281)	PCDH15 (ENSFCAG00000028379)	DKK1 (ENSFCAG00000043580) #19	PRKG1 (ENSFCAG00000013010) #20	CSTF2T (ENSFCAG00000046300) #21	A1CF (ENSFCAG00000011179) #22	ASAH2 (ENSFCAG00000030017) #23	SGMS1 (ENSFCAG00000015021) #24	MINPP1 (ENSFCAG00000032012)	PAPSS2 (ENSFCAG00000013165)	ATAD1 (ENSFCAG00000013167)	PTEN (ENSFCAG00000019200)	RNLS (ENSFCAG00000032283)	LIPJ (ENSFCAG00000009942)	LIPF (ENSFCAG00000007180)	LIPK (ENSFCAG00000007181)	LIPN (ENSFCAG00000031453)	LIPM (ENSFCAG00000007182)	ANKRD22 (ENSFCAG00000037283)	STAMBPL1 (ENSFCAG00000007184)	ACTA2 (ENSFCAG00000007186)
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b
Xenarthra	ANCESTRAL SPECIES	715												ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24
Armadillo	MODERN SPECIES	1919										ENSDNOG00000039613	MBL2 (ENSDNOG00000018551) #18	DKK1 (ENSDNOG00000044308) #19	ENSDNOG00000043346 #20	CSTF2T (ENSDNOG00000003283) #21	ENSDNOG00000047556 #20	A1CF (ENSDNOG00000002829) #22	ENSDNOG00000025030 #23	ENSDNOG00000041752	ENSDNOG00000032051	SGMS1 (ENSDNOG00000042094) #24	ENSDNOG00000048498	MINPP1 (ENSDNOG00000005975)
Sloth	MODERN SPECIES	11637																A1CF (ENSCHOG00000009089) #22
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000154368.l #18	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000161661 #21	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000163386	ENSGT00940000161066	ENSGT00940000160031	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Elephant	MODERN SPECIES	3	PHYHIPL (ENSLAFG00000005911)	BICC1 (ENSLAFG00000007749)	TFAM (ENSLAFG00000012891)	UBE2D1 (ENSLAFG00000000901)	CISD1 (ENSLAFG00000005247)	IPMK (ENSLAFG00000005245)	ENSLAFG00000029724	ENSLAFG00000025960	ZWINT (ENSLAFG00000013482)	ENSLAFG00000029946	PCDH15 (ENSLAFG00000008191)	MBL2 (ENSLAFG00000020683) #18	DKK1 (ENSLAFG00000008930) #19	PRKG1 (ENSLAFG00000008924) #20	CSTF2T (ENSLAFG00000002058) #21	A1CF (ENSLAFG00000015462) #22	ENSLAFG00000015469 #23	SGMS1 (ENSLAFG00000032570) #24	ENSLAFG00000011711	PAPSS2 (ENSLAFG00000001364)	ATAD1 (ENSLAFG00000001365)	PTEN (ENSLAFG00000005292)	RNLS (ENSLAFG00000004500)	LIPJ (ENSLAFG00000011174)	LIPF (ENSLAFG00000018433)	LIPK (ENSLAFG00000018435)	LIPN (ENSLAFG00000000948)	LIPM (ENSLAFG00000017061)	ANKRD22 (ENSLAFG00000030797)	STAMBPL1 (ENSLAFG00000017066)	ACTA2 (ENSLAFG00000000910)
Hyrax	MODERN SPECIES	3629																A1CF (ENSPCAG00000006463) #22
Tenrec	MODERN SPECIES	4338																A1CF (ENSETEG00000012527) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000159995	ENSGT00940000153335.a.b	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792.u #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031.k.b.a.b	ENSGT00940000160031.k.a.a	ENSGT00940000160031.k.a.b	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000159995	ENSGT00940000153335.a.b	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792.u #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031.k.b.a.b	ENSGT00940000160031.k.a.a	ENSGT00940000160031.k.a.b	ENSGT00940000161695	ENSGT00940000156860	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Diprotodontia	ANCESTRAL SPECIES	48	ENSGT00940000159995	ENSGT00940000153335.a.b	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792.u #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031.k.b.a.b
Diprotodontia_a	ANCESTRAL SPECIES	42	ENSGT00940000159995	ENSGT00940000153335.a.b	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792.u #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000160031.k.b.a.b
Common wonbat	MODERN SPECIES	1075	ENSVURG00010001252	SLC16A9 (ENSVURG00010001287)	FAM13C (ENSVURG00010001311)	PHYHIPL (ENSVURG00010001339)	BICC1 (ENSVURG00010001371)	ENSVURG00010001440	ENSVURG00010001464	CISD1 (ENSVURG00010001504)	IPMK (ENSVURG00010001511)	PCDH15 (ENSVURG00010001813)	ENSVURG00010001878	ENSVURG00010001886	DKK1 (ENSVURG00010001906) #19	ENSVURG00010001978 #20	ENSVURG00010002973 #20	A1CF (ENSVURG00010002982) #22	ENSVURG00010003054 #23	ENSVURG00010003845 #24	MINPP1 (ENSVURG00010003877)	PAPSS2 (ENSVURG00010003949)	ATAD1 (ENSVURG00010003960)	ENSVURG00010003995	RNLS (ENSVURG00010004046)	ENSVURG00010004069
koala	MODERN SPECIES	263													ENSPCIG00000002871 #19	ENSPCIG00000002884 #20	ENSPCIG00000036205 #20	A1CF (ENSPCIG00000002175) #22	ENSPCIG00000002219 #23	ENSPCIG00000002285 #24	MINPP1 (ENSPCIG00000004549)	PAPSS2 (ENSPCIG00000004564)	ATAD1 (ENSPCIG00000004579)	ENSPCIG00000004597	RNLS (ENSPCIG00000029921)	ENSPCIG00000029928
Wallaby	MODERN SPECIES	5539																A1CF (ENSMEUG00000015909) #22
Tasmanian devil	MODERN SPECIES	1	TMEM26 (ENSSHAG00000021348)	RHOBTB1 (ENSSHAG00000016863)	CDK1 (ENSSHAG00000017093)	ANK3 (ENSSHAG00000031496)	CCDC6 (ENSSHAG00000018251)	ENSSHAG00000028162	FAM13C (ENSSHAG00000029279)	PHYHIPL (ENSSHAG00000025753)	BICC1 (ENSSHAG00000011416)	ENSSHAG00000027150	CISD1 (ENSSHAG00000027561)	IPMK (ENSSHAG00000029373)	PCDH15 (ENSSHAG00000016966)	DKK1 (ENSSHAG00000015044) #19	PRKG1 (ENSSHAG00000026730) #20	A1CF (ENSSHAG00000005096) #22	ENSSHAG00000003054 #23	ENSSHAG00000024275 #24	ENSSHAG00000004189	ENSSHAG00000006300	ATAD1 (ENSSHAG00000005701)	ENSSHAG00000029765	RNLS (ENSSHAG00000022125)	LIPK (ENSSHAG00000001541)	ENSSHAG00000001654	ENSSHAG00000003526	ENSSHAG00000004833	LIPN (ENSSHAG00000005830)	LIPM (ENSSHAG00000006341)	ANKRD22 (ENSSHAG00000029983)	STAMBPL1 (ENSSHAG00000002001)
Opossum	MODERN SPECIES		SLC16A9 (ENSMODG00000016083)	FAM13C (ENSMODG00000016104)	PHYHIPL (ENSMODG00000016112)	ENSMODG00000016125	ENSMODG00000016127	UBE2D1 (ENSMODG00000013897)	ENSMODG00000016135	IPMK (ENSMODG00000016132)	ENSMODG00000021252	ENSMODG00000047963	ENSMODG00000048634	PCDH15 (ENSMODG00000016351)	DKK1 (ENSMODG00000016421) #19	PRKG1 (ENSMODG00000016471) #20	ENSMODG00000016477	A1CF (ENSMODG00000016478) #22	ENSMODG00000039488 #23	ENSMODG00000016486 #23	ENSMODG00000016489 #24	MINPP1 (ENSMODG00000016492)	ENSMODG00000044179	PAPSS2 (ENSMODG00000016494)	ATAD1 (ENSMODG00000016503)	ENSMODG00000016499	ENSMODG00000047779	RNLS (ENSMODG00000016507)	ENSMODG00000016519	ENSMODG00000016526	ENSMODG00000038076	ENSMODG00000049407	ENSMODG00000016553
Platypus	MODERN SPECIES	14	ENSOANG00000045162	HERC4 (ENSOANG00000004618)	MYPN (ENSOANG00000004617)	ZNF131 (ENSOANG00000046442)	ENSOANG00000004949	HMGCS1 (ENSOANG00000048390)	ENSOANG00000004614	ENSOANG00000037426	UBE2D1 (ENSOANG00000041165)	CISD1 (ENSOANG00000038471)	IPMK (ENSOANG00000040669)	PCDH15 (ENSOANG00000001903)	DKK1 (ENSOANG00000007031) #19	PRKG1 (ENSOANG00000007026) #20	ENSOANG00000041920 #20	A1CF (ENSOANG00000007360) #22	ENSOANG00000004741 #23	SGMS1 (ENSOANG00000013886) #24	ENSOANG00000041311	PAPSS2 (ENSOANG00000008206)	ATAD1 (ENSOANG00000008207)	ENSOANG00000039712	ENSOANG00000028726	ENSOANG00000019910	LIPM (ENSOANG00000000469)	ANKRD22 (ENSOANG00000000465)	STAMBPL1 (ENSOANG00000000463)	ACTA2 (ENSOANG00000000346)	ENSOANG00000041139	CH25H (ENSOANG00000002397)	LIPA (ENSOANG00000047066)
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00960000190936	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00960000190936	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.a.b.b.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00960000190936	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a
Laterata	ANCESTRAL SPECIES		ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a
Common wall lizard	MODERN SPECIES	13	PLA2G12B (ENSPMRG00000005661)	P4HA1 (ENSPMRG00000005669)	NUDT13 (ENSPMRG00000005689)	ECD (ENSPMRG00000005700)	FAM149B1 (ENSPMRG00000005717)	DNAJC9 (ENSPMRG00000005740)	TFAM (ENSPMRG00000005756)	UBE2D1 (ENSPMRG00000005769)	ENSPMRG00000005788	CISD1 (ENSPMRG00000005795)	IPMK (ENSPMRG00000005812)	ENSPMRG00000005821	PCDH15 (ENSPMRG00000005842)	DKK1 (ENSPMRG00000005907) #19	PRKG1 (ENSPMRG00000005927) #20	A1CF (ENSPMRG00000005980) #22	SGMS1 (ENSPMRG00000006014) #24	PAPSS2 (ENSPMRG00000006045)	PTEN (ENSPMRG00000006080)	ENSPMRG00000006092	ENSPMRG00000006108	ENSPMRG00000006114	ENSPMRG00000006126	ENSPMRG00000006132	ENSPMRG00000006143	ENSPMRG00000006170	ENSPMRG00000006177	ENSPMRG00000006209	ENSPMRG00000006257	ANKRD22 (ENSPMRG00000006267)	STAMBPL1 (ENSPMRG00000006272)
Argentine black and white tegu	MODERN SPECIES	22	P4HA1 (ENSSMRG00000012824)	NUDT13 (ENSSMRG00000012825)	ECD (ENSSMRG00000012826)	FAM149B1 (ENSSMRG00000012830)	DNAJC9 (ENSSMRG00000012832)	ENSSMRG00000012834	UBE2D1 (ENSSMRG00000012835)	CISD1 (ENSSMRG00000012837)	IPMK (ENSSMRG00000012838)	PCDH15 (ENSSMRG00000012852)	DKK1 (ENSSMRG00000012854) #19	ENSSMRG00000012855 #20	ENSSMRG00000012856	ENSSMRG00000012859 #20	ENSSMRG00000012860	A1CF (ENSSMRG00000012861) #22	SGMS1 (ENSSMRG00000012862) #24	MINPP1 (ENSSMRG00000012863)	PAPSS2 (ENSSMRG00000012865)	ATAD1 (ENSSMRG00000012867)	ENSSMRG00000012868	PTEN (ENSSMRG00000012869)	RNLS (ENSSMRG00000012870)	ENSSMRG00000012871	ENSSMRG00000012872	ENSSMRG00000012873	ENSSMRG00000012874	ENSSMRG00000012876	ENSSMRG00000012878	ENSSMRG00000012879	ENSSMRG00000012880
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00960000190936	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b	ENSGT00940000156860.a.a
Lizard	MODERN SPECIES	860													ENSACAG00000042356	ENSACAG00000040538	ENSACAG00000036022	ENSACAG00000015269 #22	ENSACAG00000015253 #24	ENSACAG00000036933	MINPP1 (ENSACAG00000015245)	ENSACAG00000044002	PAPSS2 (ENSACAG00000015171)	ATAD1 (ENSACAG00000015140)	ENSACAG00000039229	PTEN (ENSACAG00000015101)	RNLS (ENSACAG00000015097)	ENSACAG00000014986	ENSACAG00000022178	ENSACAG00000039097	ENSACAG00000036862	ENSACAG00000033529	ENSACAG00000028781
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00960000190936	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00940000158306 #24	ENSGT00940000172406	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a	ENSGT00940000156860.a.b.a.b.b.a.c	ENSGT00940000156860.a.b.a.b.b.a.d	ENSGT00940000156860.a.b.b	ENSGT00940000167438.a	ENSGT00940000156860.b
Elapidae_a	ANCESTRAL SPECIES	139													ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00940000158306 #24	ENSGT00940000172406	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a
Acanthophiinae	ANCESTRAL SPECIES	131													ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00940000158306 #24	ENSGT00940000172406	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.fb.a	ENSGT00940000156860.a.b.a.b.b.b	ENSGT00940000156860.a.b.a.b.a
Eastern brown snake	MODERN SPECIES	129												DKK1 (ENSPTXG00000015114) #19	ENSPTXG00000015116 #20	ENSPTXG00000015120 #20	ENSPTXG00000015122	A1CF (ENSPTXG00000015123) #22	SGMS1 (ENSPTXG00000015125) #24	ENSPTXG00000015129	MINPP1 (ENSPTXG00000015177)	PAPSS2 (ENSPTXG00000015188)	ATAD1 (ENSPTXG00000015200)	PTEN (ENSPTXG00000015202)	RNLS (ENSPTXG00000015204)	ENSPTXG00000015205	ENSPTXG00000015209
Mainland tiger snake	MODERN SPECIES	126									ENSNSUG00000008684	PCDH15 (ENSNSUG00000008535)	ENSNSUG00000008534	DKK1 (ENSNSUG00000008533) #19	ENSNSUG00000008532 #20	ENSNSUG00000008531 #20	ENSNSUG00000008530	A1CF (ENSNSUG00000008529) #22	SGMS1 (ENSNSUG00000008528) #24	ENSNSUG00000008521
Blue-lipped sea krait	MODERN SPECIES	8999																ENSLLTG00000013457 #22
tuatara	MODERN SPECIES	1283																A1CF (ENSSPUG00000006797) #22	ENSSPUG00000006864 #23	SGMS1 (ENSSPUG00000007067) #24
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000167957	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000156860.a.b.a.b.b.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a
Goode s thornscrub tortoise	MODERN SPECIES	21	NUDT13 (ENSGEVG00005009995)	ECD (ENSGEVG00005009948)	FAM149B1 (ENSGEVG00005009870)	DNAJC9 (ENSGEVG00005009843)	TFAM (ENSGEVG00005009768)	UBE2D1 (ENSGEVG00005009734)	CISD1 (ENSGEVG00005009710)	IPMK (ENSGEVG00005009689)	ENSGEVG00005009657	PCDH15 (ENSGEVG00005008472)	DKK1 (ENSGEVG00005008221) #19	ENSGEVG00005008173 #20	ENSGEVG00005008137 #20	ENSGEVG00005008126	ENSGEVG00005008112	ENSGEVG00005008092 #22	ENSGEVG00005008003 #23	SGMS1 (ENSGEVG00005007975) #24	MINPP1 (ENSGEVG00005007946)	PAPSS2 (ENSGEVG00005007869)	ATAD1 (ENSGEVG00005007826)	PTEN (ENSGEVG00005007804)	RNLS (ENSGEVG00005007783)	ENSGEVG00005007747	ENSGEVG00005007700	ENSGEVG00005007655	ENSGEVG00005007595	ENSGEVG00005007517	ENSGEVG00005007381	ANKRD22 (ENSGEVG00005007356)	STAMBPL1 (ENSGEVG00005007213)
Abingdon island giant tortoise	MODERN SPECIES	2628													ENSCABG00000011100 #20	ENSCABG00000011099	ENSCABG00000011098	A1CF (ENSCABG00000011097) #22	ENSCABG00000011090 #23
Emydidae	ANCESTRAL SPECIES	6	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000154818.a.b.bb.b.a	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696.s.a	ENSGT00940000154696.s.b	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005
painted turtle	MODERN SPECIES	744										PCDH15 (ENSCPBG00000025753)	DKK1 (ENSCPBG00000026457) #19	ENSCPBG00000026458 #20	ENSCPBG00000026461 #20	ENSCPBG00000026462	ENSCPBG00000026463	A1CF (ENSCPBG00000026464) #22	ENSCPBG00000026465 #23	ENSCPBG00000026466	SGMS1 (ENSCPBG00000026467) #24	MINPP1 (ENSCPBG00000026469)	PAPSS2 (ENSCPBG00000026470)	ATAD1 (ENSCPBG00000026471)	PTEN (ENSCPBG00000026473)	RNLS (ENSCPBG00000026474)	ENSCPBG00000026475	ENSCPBG00000026477	ENSCPBG00000026487	ENSCPBG00000026490	ENSCPBG00000026492	ENSCPBG00000026495	ANKRD22 (ENSCPBG00000026497)
Three-toed box turtle	MODERN SPECIES	39	FAM149B1 (ENSTMTG00000000936)	DNAJC9 (ENSTMTG00000000925)	TFAM (ENSTMTG00000000919)	UBE2D1 (ENSTMTG00000000908)	CISD1 (ENSTMTG00000000899)	IPMK (ENSTMTG00000000887)	ENSTMTG00000000875	ENSTMTG00000000861	PCDH15 (ENSTMTG00000000370)	DKK1 (ENSTMTG00000000108) #19	ENSTMTG00000000085 #20	ENSTMTG00000022040	ENSTMTG00000022033 #20	ENSTMTG00000022028	ENSTMTG00000022020	A1CF (ENSTMTG00000022011) #22	ENSTMTG00000022000 #23	SGMS1 (ENSTMTG00000021990) #24	MINPP1 (ENSTMTG00000021982)	PAPSS2 (ENSTMTG00000021970)	ATAD1 (ENSTMTG00000021964)	PTEN (ENSTMTG00000021956)	RNLS (ENSTMTG00000021952)	ENSTMTG00000021937	ENSTMTG00000021917	ENSTMTG00000021909	ENSTMTG00000021903	ENSTMTG00000021879	ENSTMTG00000021864	ANKRD22 (ENSTMTG00000021855)	STAMBPL1 (ENSTMTG00000021843)
Chinese turtle	MODERN SPECIES	963															ENSPSIG00000000698	A1CF (ENSPSIG00000010318) #22	ENSPSIG00000010112 #23	SGMS1 (ENSPSIG00000009989) #24	MINPP1 (ENSPSIG00000009907)	PAPSS2 (ENSPSIG00000009096)	ATAD1 (ENSPSIG00000008883)	ENSPSIG00000008864	RNLS (ENSPSIG00000008739)	ENSPSIG00000007794	ENSPSIG00000007788	ENSPSIG00000007218	ENSPSIG00000007101	ENSPSIG00000007094	ANKRD22 (ENSPSIG00000006757)	STAMBPL1 (ENSPSIG00000006150)	ACTA2 (ENSPSIG00000006143)
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000156860.b	ENSGT00940000156860.a.a	ENSGT00390000009005	ENSGT00940000153710.b	ENSGT00940000154148.a.a	ENSGT00950000183126.b.b
Aves	ANCESTRAL SPECIES	6	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00950000185955	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT00390000000483.a.b	ENSGT00390000011381
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT00390000011381	ENSGT00940000156697	ENSGT00940000158585
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT00390000011381	ENSGT00940000156697
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT00390000011381	ENSGT00940000156697
Pink-footed goose	MODERN SPECIES	149														PCDH15 (ENSABRG00000019848)	PRKG1 (ENSABRG00000019902) #20	A1CF (ENSABRG00000019924) #22	ENSABRG00000019931 #23	SGMS1 (ENSABRG00000019934) #24	MINPP1 (ENSABRG00000019936)	PAPSS2 (ENSABRG00000019939)	ATAD1 (ENSABRG00000019946)	PTEN (ENSABRG00000019952)	RNLS (ENSABRG00000019954)	ENSABRG00000019955	ENSABRG00000019963	ENSABRG00000019973	ENSABRG00000019977	PAOX (ENSABRG00000019984)	ENSABRG00000019987	MTG1 (ENSABRG00000019990)	ECHS1 (ENSABRG00000019994)
Duck	MODERN SPECIES	24	OIT3 (ENSAPLG00000009116)	PLA2G12B (ENSAPLG00000009178)	P4HA1 (ENSAPLG00000009284)	NUDT13 (ENSAPLG00000009992)	ECD (ENSAPLG00000010059)	FAM149B1 (ENSAPLG00000010310)	DNAJC9 (ENSAPLG00000026355)	TFAM (ENSAPLG00000010787)	UBE2D1 (ENSAPLG00000029826)	CISD1 (ENSAPLG00000010904)	IPMK (ENSAPLG00000011011)	PCDH15 (ENSAPLG00000003312)	DKK1 (ENSAPLG00000026530) #19	PRKG1 (ENSAPLG00000003140) #20	ENSAPLG00000018620	A1CF (ENSAPLG00000002964) #22	ENSAPLG00000002662 #23	SGMS1 (ENSAPLG00000002477) #24	MINPP1 (ENSAPLG00000019644)	PAPSS2 (ENSAPLG00000002394)	ATAD1 (ENSAPLG00000001653)	PTEN (ENSAPLG00000015686)	RNLS (ENSAPLG00000015666)	ENSAPLG00000031021	ENSAPLG00000015088	ENSAPLG00000015012	ENSAPLG00000014635	ZNF511 (ENSAPLG00000014183)	TUBGCP2 (ENSAPLG00000013602)	ADAM8 (ENSAPLG00000012822)	ERLIN1 (ENSAPLG00000012553)
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00390000016042	ENSGT00600000084626	ENSGT00940000170983	ENSGT00940000156914	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000165723	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT01040000244342	ENSGT00390000011381
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00950000185845	ENSGT00390000016042	ENSGT00600000084626	ENSGT00940000170983	ENSGT00940000156914	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000165723	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT01040000244342
Chicken	MODERN SPECIES	35	ENSGALG00010023171	DDX21 (ENSGALG00010023160)	STOX1 (ENSGALG00010023157)	CCAR1 (ENSGALG00010023140)	TET1 (ENSGALG00010023108)	SLC25A16 (ENSGALG00010023079)	DNA2 (ENSGALG00010023065)	RUFY2 (ENSGALG00010023050)	HNRNPH3 (ENSGALG00010022981)	PBLD (ENSGALG00010022956)	ATOH7 (ENSGALG00010022922)	MYPN (ENSGALG00010022890)	HERC4 (ENSGALG00010022858)	ENSGALG00010022841	PRKG1 (ENSGALG00010022828) #20	A1CF (ENSGALG00010022774) #22	ENSGALG00010023894 #23	ENSGALG00010022487 #23	SGMS1 (ENSGALG00010022771) #24	MINPP1 (ENSGALG00010022755)	PAPSS2 (ENSGALG00010022745)	ATAD1 (ENSGALG00010022685)	PTEN (ENSGALG00010022667)	ENSGALG00010022661	RNLS (ENSGALG00010022599)	LIPML1 (ENSGALG00010022596)	ENSGALG00010022587	ENSGALG00010022577	PAOX (ENSGALG00010022567)	MTG1 (ENSGALG00010022546)	SPRN (ENSGALG00010023278)
Turkey	MODERN SPECIES	28	ENSMGAG00000001047 #18	RASGEF1A (ENSMGAG00000001069)	CSGALNACT2 (ENSMGAG00000001117)	RET (ENSMGAG00000001124)	BMS1 (ENSMGAG00000001170)	ENSMGAG00000020801	ENSMGAG00000001360	ENSMGAG00000001306	ENSMGAG00000001327	ENSMGAG00000001343	ENSMGAG00000001413	IPMK (ENSMGAG00000001422)	PCDH15 (ENSMGAG00000001461)	ENSMGAG00000022523	PRKG1 (ENSMGAG00000001487) #20	A1CF (ENSMGAG00000001507) #22	ENSMGAG00000001518 #23	ENSMGAG00000022469 #23	ENSMGAG00000001545 #24	MINPP1 (ENSMGAG00000018724)	PAPSS2 (ENSMGAG00000001585)	ATAD1 (ENSMGAG00000001567)	ENSMGAG00000001608	RNLS (ENSMGAG00000021357)	ENSMGAG00000002623	ENSMGAG00000018566	ENSMGAG00000022850	ENSMGAG00000001821	ENSMGAG00000001826	ENSMGAG00000021658	ZNF511 (ENSMGAG00000018262)
Japanese quail	MODERN SPECIES	24	RET (ENSCJPG00005012668)	BMS1 (ENSCJPG00005012672)	ENSCJPG00005012771	ENSCJPG00005012772	ANXA11 (ENSCJPG00005012773)	ECD (ENSCJPG00005012774)	FAM149B1 (ENSCJPG00005012775)	PCDH15 (ENSCJPG00005012776)	IPMK (ENSCJPG00005012914)	CISD1 (ENSCJPG00005012915)	UBE2D1 (ENSCJPG00005012916)	ENSCJPG00005012917	DNAJC9 (ENSCJPG00005012918)	DKK1 (ENSCJPG00005012919) #19	PRKG1 (ENSCJPG00005012920) #20	A1CF (ENSCJPG00005012922) #22	ENSCJPG00005012924 #23	SGMS1 (ENSCJPG00005012949) #24	MINPP1 (ENSCJPG00005012950)	PAPSS2 (ENSCJPG00005012951)	ATAD1 (ENSCJPG00005012952)	PTEN (ENSCJPG00005012953)	RNLS (ENSCJPG00005012954)	ENSCJPG00005012955	ENSCJPG00005012956	ENSCJPG00005012957	PAOX (ENSCJPG00005012958)	ENSCJPG00005012961	ZNF511 (ENSCJPG00005012962)	TUBGCP2 (ENSCJPG00005012963)	ADAM8 (ENSCJPG00005013156)
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT00390000011381	ENSGT00940000156697	ENSGT00940000158585
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000157851	ENSGT00390000008798.d	ENSGT00940000156635	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT00390000011381	ENSGT00940000156697	ENSGT00940000158585
Golden eagle	MODERN SPECIES	2	PLA2G12B (ENSACCG00020003687)	P4HA1 (ENSACCG00020003665)	NUDT13 (ENSACCG00020003617)	ECD (ENSACCG00020003593)	FAM149B1 (ENSACCG00020003565)	DNAJC9 (ENSACCG00020003553)	TFAM (ENSACCG00020003539)	UBE2D1 (ENSACCG00020003518)	CISD1 (ENSACCG00020003507)	IPMK (ENSACCG00020003500)	PCDH15 (ENSACCG00020003267)	DKK1 (ENSACCG00020003063) #19	ENSACCG00020003052	ENSACCG00020003043 #20	ENSACCG00020003026 #20	A1CF (ENSACCG00020002997) #22	ENSACCG00020002906 #23	SGMS1 (ENSACCG00020002825) #24	MINPP1 (ENSACCG00020002811)	PAPSS2 (ENSACCG00020002756)	ATAD1 (ENSACCG00020002676)	PTEN (ENSACCG00020002657)	RNLS (ENSACCG00020002622)	ENSACCG00020002578	PAOX (ENSACCG00020002521)	MTG1 (ENSACCG00020002479)	ECHS1 (ENSACCG00020002462)	ZNF511 (ENSACCG00020002440)	TUBGCP2 (ENSACCG00020002409)	ADAM8 (ENSACCG00020002376)	ERLIN1 (ENSACCG00020002355)
Kakapo	MODERN SPECIES	22	PLA2G12B (ENSSHBG00005012659)	P4HA1 (ENSSHBG00005012689)	NUDT13 (ENSSHBG00005012776)	ECD (ENSSHBG00005012801)	FAM149B1 (ENSSHBG00005012837)	DNAJC9 (ENSSHBG00005012899)	TFAM (ENSSHBG00005012913)	UBE2D1 (ENSSHBG00005012947)	CISD1 (ENSSHBG00005012979)	IPMK (ENSSHBG00005012993)	PCDH15 (ENSSHBG00005013712)	DKK1 (ENSSHBG00005019567) #19	ENSSHBG00005019572 #20	ENSSHBG00005019585 #20	ENSSHBG00005019589	A1CF (ENSSHBG00005019593) #22	ENSSHBG00005019599 #23	SGMS1 (ENSSHBG00005019606) #24	MINPP1 (ENSSHBG00005019608)	PAPSS2 (ENSSHBG00005019610)	ATAD1 (ENSSHBG00005019615)	PTEN (ENSSHBG00005019622)	RNLS (ENSSHBG00005004973)	MARCHF7 (ENSSHBG00005004988)	BAZ2B (ENSSHBG00005005153)	WDSUB1 (ENSSHBG00005012030)	TANC1 (ENSSHBG00005012165)	DAPL1 (ENSSHBG00005012539)	PKP4 (ENSSHBG00005012566)	CCDC148 (ENSSHBG00005012608)	UPP2 (ENSSHBG00005012682)
Passeriformes	ANCESTRAL SPECIES	35									ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000156860.a.a.c	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT01040000243301
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000161078	ENSGT00940000157470	ENSGT00530000063713.a	ENSGT00390000014082.b	ENSGT00940000158394	ENSGT00390000000984	ENSGT00940000158210	ENSGT00940000158794	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000156860.a.a.c	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT01040000243301
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000161078	ENSGT00940000157470	ENSGT00530000063713.a	ENSGT00390000014082.b	ENSGT00940000158394	ENSGT00390000000984	ENSGT00940000158210	ENSGT00940000158794	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000156860.a.a.c	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT01040000243301
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000157470	ENSGT00530000063713.a	ENSGT00390000014082.b	ENSGT00940000158394	ENSGT00390000000984	ENSGT00940000158210	ENSGT00940000158794	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00940000156675	ENSGT00940000161319 #19	ENSGT00940000154704.d #20	ENSGT00390000004632	ENSGT00940000158678 #22	ENSGT00390000015792 #23	ENSGT00940000158306 #24	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000163053	ENSGT00390000016052	ENSGT00940000156860.a.b.a.a	ENSGT00940000156860.a.b.b	ENSGT00940000167438	ENSGT00940000158274	ENSGT00500000044923	ENSGT00940000157609	ENSGT01040000243301	ENSGT00390000011381
Common canary	MODERN SPECIES	7	TMEM26 (ENSSCAG00000003786)	ENSSCAG00000003789	ARID5B (ENSSCAG00000003800)	RTKN2 (ENSSCAG00000003818)	ZNF365 (ENSSCAG00000003822)	NRBF2 (ENSSCAG00000003840)	ENSSCAG00000003844	JMJD1C (ENSSCAG00000003847)	REEP3 (ENSSCAG00000003854)	ENSSCAG00000003860	UBE2D1 (ENSSCAG00000003868)	CISD1 (ENSSCAG00000003876)	IPMK (ENSSCAG00000003882)	PCDH15 (ENSSCAG00000003895)	ENSSCAG00000003915	A1CF (ENSSCAG00000003918) #22	ENSSCAG00000003934 #23	SGMS1 (ENSSCAG00000003967) #24	MINPP1 (ENSSCAG00000003977)	PAPSS2 (ENSSCAG00000003980)	ATAD1 (ENSSCAG00000003991)	ENSSCAG00000004001	RNLS (ENSSCAG00000004012)	ENSSCAG00000004059	ENSSCAG00000004063	ENSSCAG00000004070	ENSSCAG00000004076	PAOX (ENSSCAG00000004105)	MTG1 (ENSSCAG00000004114)	ECHS1 (ENSSCAG00000004124)	ENSSCAG00000004130
Zebra finch	MODERN SPECIES	28	RTKN2 (ENSTGUG00000005245)	ADO (ENSTGUG00000026135)	EGR2 (ENSTGUG00000026762)	NRBF2 (ENSTGUG00000024274)	JMJD1C (ENSTGUG00000005207)	REEP3 (ENSTGUG00000005188)	ENSTGUG00000005161	UBE2D1 (ENSTGUG00000005149)	CISD1 (ENSTGUG00000022153)	IPMK (ENSTGUG00000019280)	PCDH15 (ENSTGUG00000016392)	ENSTGUG00000027440	DKK1 (ENSTGUG00000024055) #19	PRKG1 (ENSTGUG00000025160) #20	ENSTGUG00000025977	A1CF (ENSTGUG00000005090) #22	ENSTGUG00000005068 #23	SGMS1 (ENSTGUG00000005065) #24	MINPP1 (ENSTGUG00000020068)	PAPSS2 (ENSTGUG00000005019)	ATAD1 (ENSTGUG00000005005)	ENSTGUG00000004977	RNLS (ENSTGUG00000004969)	ENSTGUG00000019603	ENSTGUG00000004919	ENSTGUG00000004913	ENSTGUG00000004863	PAOX (ENSTGUG00000004852)	MTG1 (ENSTGUG00000004841)	ECHS1 (ENSTGUG00000004836)	TUBGCP2 (ENSTGUG00000004790)
Medium ground finch	MODERN SPECIES	211													PCDH15 (ENSGFOG00000013302)	ENSGFOG00000013263	PRKG1 (ENSGFOG00000013256) #20	ENSGFOG00000013252 #22	ENSGFOG00000013234 #23	SGMS1 (ENSGFOG00000013229) #24
Flycatcher	MODERN SPECIES	25	ZNF365 (ENSFALG00000013284)	ADO (ENSFALG00000026091)	EGR2 (ENSFALG00000013277)	NRBF2 (ENSFALG00000025961)	JMJD1C (ENSFALG00000013267)	REEP3 (ENSFALG00000013264)	ENSFALG00000026776	ENSFALG00000013250	IPMK (ENSFALG00000028891)	ENSFALG00000023132	ENSFALG00000026261	PCDH15 (ENSFALG00000013208)	DKK1 (ENSFALG00000013191) #19	ENSFALG00000023365	PRKG1 (ENSFALG00000013186) #20	A1CF (ENSFALG00000013183) #22	ENSFALG00000013155 #23	ENSFALG00000013133 #24	MINPP1 (ENSFALG00000025617)	PAPSS2 (ENSFALG00000013117)	ATAD1 (ENSFALG00000013110)	PTEN (ENSFALG00000028069)	RNLS (ENSFALG00000013103)	ENSFALG00000013100	ENSFALG00000013073	ENSFALG00000013051	ENSFALG00000013049	ENSFALG00000013045	ENSFALG00000013031	ECHS1 (ENSFALG00000013017)	ENSFALG00000024810
Great tit	MODERN SPECIES	26	RHOBTB1 (ENSPMJG00000015418)	TMEM26 (ENSPMJG00000015414)	ENSPMJG00000015412	ARID5B (ENSPMJG00000015406)	RTKN2 (ENSPMJG00000015405)	ZNF365 (ENSPMJG00000015404)	ADO (ENSPMJG00000015402)	EGR2 (ENSPMJG00000015401)	NRBF2 (ENSPMJG00000015399)	JMJD1C (ENSPMJG00000015398)	REEP3 (ENSPMJG00000015397)	PCDH15 (ENSPMJG00000015392)	DKK1 (ENSPMJG00000015391) #19	ENSPMJG00000015390	PRKG1 (ENSPMJG00000015389) #20	A1CF (ENSPMJG00000015388) #22	ENSPMJG00000015387 #23	SGMS1 (ENSPMJG00000015386) #24	MINPP1 (ENSPMJG00000015384)	PAPSS2 (ENSPMJG00000015383)	ATAD1 (ENSPMJG00000015382)	ENSPMJG00000015381	RNLS (ENSPMJG00000015379)	ENSPMJG00000015378	ENSPMJG00000015377	ENSPMJG00000015376	ENSPMJG00000015375	PAOX (ENSPMJG00000015374)	ECHS1 (ENSPMJG00000015373)	ENSPMJG00000015372	ZNF511 (ENSPMJG00000015371)
African ostrich	MODERN SPECIES	169	MICU1 (ENSSCUG00000000766)	MCU (ENSSCUG00000000760)	OIT3 (ENSSCUG00000000755)	PLA2G12B (ENSSCUG00000000753)	P4HA1 (ENSSCUG00000000751)	NUDT13 (ENSSCUG00000000747)	ECD (ENSSCUG00000000745)	FAM149B1 (ENSSCUG00000000743)	ENSSCUG00000000742	UBE2D1 (ENSSCUG00000000741)	CISD1 (ENSSCUG00000000740)	IPMK (ENSSCUG00000000739)	PCDH15 (ENSSCUG00000000726)	PRKG1 (ENSSCUG00000000702) #20	ENSSCUG00000000683	A1CF (ENSSCUG00000000679) #22	ENSSCUG00000000674 #23	SGMS1 (ENSSCUG00000000669) #24	ENSSCUG00000000661	PAPSS2 (ENSSCUG00000000659)	ATAD1 (ENSSCUG00000000655)	ENSSCUG00000000650
Australian saltwater crocodile	MODERN SPECIES	39	PLA2G12B (ENSCPRG00005009706)	P4HA1 (ENSCPRG00005009712)	NUDT13 (ENSCPRG00005009714)	ECD (ENSCPRG00005009718)	FAM149B1 (ENSCPRG00005009726)	DNAJC9 (ENSCPRG00005009735)	TFAM (ENSCPRG00005009739)	UBE2D1 (ENSCPRG00005009743)	CISD1 (ENSCPRG00005009747)	IPMK (ENSCPRG00005009751)	PCDH15 (ENSCPRG00005009765)	DKK1 (ENSCPRG00005009817) #19	ENSCPRG00005009830 #20	ENSCPRG00005009932 #20	ENSCPRG00005009934	A1CF (ENSCPRG00005009937) #22	ENSCPRG00005009945 #23	SGMS1 (ENSCPRG00005009968) #24	MINPP1 (ENSCPRG00005009972)	PAPSS2 (ENSCPRG00005009973)	ATAD1 (ENSCPRG00005009979)	PTEN (ENSCPRG00005009989)	RNLS (ENSCPRG00005010005)	ENSCPRG00005010010	ENSCPRG00005010031	CCDC6 (ENSCPRG00005010042)	ANK3 (ENSCPRG00005010069)	CDK1 (ENSCPRG00005010155)	RHOBTB1 (ENSCPRG00005010159)	TMEM26 (ENSCPRG00005010161)	ENSCPRG00005010163