Mammalia	ANCESTRAL SPECIES		ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000164962	ENSGT00990000203769	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000181563	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Theria	ANCESTRAL SPECIES	1	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000164962	ENSGT00990000203769	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000181563	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Eutheria	ANCESTRAL SPECIES	17	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.C	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Primates	ANCESTRAL SPECIES	26	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Haplorrhini	ANCESTRAL SPECIES	28	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00390000016655.a.a.b	ENSGT00940000169295	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00940000154335.a	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES	21	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00730000113274 #20	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00910000147950	ENSGT00730000113274 #20	ENSGT00390000013335 #17	ENSGT00390000017209 #18	ENSGT00530000063691.b #19	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000154782.j #37	ENSGT00940000155079.b	ENSGT00940000160425
Hominidae	ANCESTRAL SPECIES	23	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00730000113274 #20	ENSGT00390000013335 #17	ENSGT00390000017209 #18	ENSGT00530000063691.b #19	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000154782.j #37	ENSGT00940000155079.b	ENSGT00940000153716.A.g.b	ENSGT00940000160425
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000169295	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00730000113274 #20	ENSGT00390000013335 #17	ENSGT00390000017209 #18	ENSGT00530000063691.b #19	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000153889.e.b.a.d.a #35	ENSGT00940000156743 #36	ENSGT00940000154782.j #37	ENSGT00940000153147.m.a.a.a.a.a	ENSGT00940000155079.b
Gorilla	MODERN SPECIES	4	ENSGGOG00000011170 #7	ENSGGOG00000036826 #8	CCDC70 (ENSGGOG00000011177) #9	ENSGGOG00000038649 #10	ATP7B (ENSGGOG00000015975) #11	ENSGGOG00000026561 #12	ALG11 (ENSGGOG00000022603) #13	ENSGGOG00000005881 #14	NEK3 (ENSGGOG00000013001) #15	ENSGGOG00000042636 #16	THSD1 (ENSGGOG00000025774) #17	VPS36 (ENSGGOG00000008091) #18	CKAP2 (ENSGGOG00000005944) #19	ENSGGOG00000038137 #20	HNRNPA1L2 (ENSGGOG00000025827) #21	SUGT1 (ENSGGOG00000006797) #22	CNMD (ENSGGOG00000004005) #23	PCDH8 (ENSGGOG00000002961) #24	OLFM4 (ENSGGOG00000012253) #25	ENSGGOG00000037262 #26	ENSGGOG00000023324 #27	ENSGGOG00000022544 #28	PCDH17 (ENSGGOG00000038108) #29	ENSGGOG00000039321 #30	DIAPH3 (ENSGGOG00000001745) #31	ENSGGOG00000028580 #32	TDRD3 (ENSGGOG00000025560) #33	ENSGGOG00000039777 #34	ENSGGOG00000038146 #35	PCDH20 (ENSGGOG00000005530) #36	ENSGGOG00000022721 #37
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00730000113274 #20	ENSGT00390000013335 #17	ENSGT00390000017209 #18	ENSGT00530000063691.b #19	ENSGT00950000183123.g.a.a.b ##21	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000153889.e.b.a.d.a #35	ENSGT00940000156743 #36	ENSGT00940000154782.j #37	ENSGT00940000153147.m.a.a.a.a.a	ENSGT00940000155079.b	ENSGT00940000160425
Human	MODERN SPECIES	4	SERPINE3 (ENSG00000253309)	INTS6 (ENSG00000102786)	WDFY2 (ENSG00000139668)	DHRS12 (ENSG00000102796) #7	TMEM272 (ENSG00000281106) #8	CCDC70 (ENSG00000123171) #9	ATP7B (ENSG00000123191) #11	ALG11 (ENSG00000253710) #13	UTP14C (ENSG00000253797)	NEK5 (ENSG00000197168) #14	NEK3 (ENSG00000136098) #15	THSD1 (ENSG00000136114) #17	VPS36 (ENSG00000136100) #18	CKAP2 (ENSG00000136108) #19	HNRNPA1L2 (ENSG00000139675) ##21	SUGT1 (ENSG00000165416) #22	CNMD (ENSG00000136110) #23	PCDH8 (ENSG00000136099) #24	OLFM4 (ENSG00000102837) #25	PRR20A (ENSG00000204919) #28	PRR20C (ENSG00000229665) #28	PRR20B (ENSG00000204918) #28	PRR20D (ENSG00000227151) #28	PRR20E (ENSG00000234278) #28	PCDH17 (ENSG00000118946) #29	DIAPH3 (ENSG00000139734) #31	TDRD3 (ENSG00000083544) #34	PCDH20 (ENSG00000280165) #36	ENSG00000197991	ENSG00000237378	ENSG00000285566
Pan	ANCESTRAL SPECIES	22	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.c #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00730000113274 #20	ENSGT00950000183123.g.a.a.b ##21	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00940000154810.d.b	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000153889.e.b.a.d.a #35	ENSGT00940000156743 #36	ENSGT00940000154782.j #37	ENSGT00940000153147.m.a.a.a.a.a	ENSGT00940000155079.b	ENSGT00940000160425
Chimpanzee	MODERN SPECIES	4	WDFY2 (ENSPTRG00000005892)	DHRS12 (ENSPTRG00000005893) #7	TMEM272 (ENSPTRG00000045165) #8	CCDC70 (ENSPTRG00000005895) #9	ENSPTRG00000052844 #10	ATP7B (ENSPTRG00000005897) #11	ALG11 (ENSPTRG00000005898) #13	UTP14C (ENSPTRG00000050996)	NEK5 (ENSPTRG00000024302) #14	NEK3 (ENSPTRG00000005899) #15	CKAP2 (ENSPTRG00000005903) #19	VPS36 (ENSPTRG00000005902) #18	THSD1 (ENSPTRG00000005901) #17	ENSPTRG00000047950 #20	ENSPTRG00000031176	SUGT1 (ENSPTRG00000005906) #22	CNMD (ENSPTRG00000005907) #23	PCDH8 (ENSPTRG00000005909) #24	OLFM4 (ENSPTRG00000005910) #25	ENSPTRG00000044167 #26	ENSPTRG00000040691	ENSPTRG00000050666 ##27	PCDH17 (ENSPTRG00000005914) #29	DIAPH3 (ENSPTRG00000005916) #31	ENSPTRG00000049552 #32	TDRD3 (ENSPTRG00000005918) #34	ENSPTRG00000048695 #35	PCDH20 (ENSPTRG00000005920) #36	ENSPTRG00000051905 #37	ENSPTRG00000045446	PCDH9 (ENSPTRG00000005922)
Bonobo	MODERN SPECIES	4	WDFY2 (ENSPPAG00000029242)	ENSPPAG00000030401 #7	ENSPPAG00000032362 #8	CCDC70 (ENSPPAG00000032647) #9	ENSPPAG00000031955 #10	ATP7B (ENSPPAG00000033929) #11	ALG11 (ENSPPAG00000035574) #13	UTP14C (ENSPPAG00000039808)	ENSPPAG00000041915 #14	NEK3 (ENSPPAG00000037532) #15	ENSPPAG00000040096 #20	THSD1 (ENSPPAG00000041454) #17	VPS36 (ENSPPAG00000016106) #18	CKAP2 (ENSPPAG00000034419) #19	HNRNPA1L2 (ENSPPAG00000039867) ##21	SUGT1 (ENSPPAG00000042120) #22	CNMD (ENSPPAG00000006373) #23	PCDH8 (ENSPPAG00000030708) #24	OLFM4 (ENSPPAG00000036050) #25	ENSPPAG00000035928 #26	ENSPPAG00000035921	ENSPPAG00000036165	ENSPPAG00000023659 ##27	ENSPPAG00000025298	PCDH17 (ENSPPAG00000036507) #29	DIAPH3 (ENSPPAG00000036848) #31	ENSPPAG00000024941 #32	ENSPPAG00000009516	TDRD3 (ENSPPAG00000010477) #34	ENSPPAG00000035282 #35	PCDH20 (ENSPPAG00000012956) #36
Orangutan	MODERN SPECIES	4	INTS6 (ENSPPYG00000005381)	WDFY2 (ENSPPYG00000005382)	ENSPPYG00000029649 #7	TMEM272 (ENSPPYG00000039812) #8	CCDC70 (ENSPPYG00000005384) #9	ENSPPYG00000041508 #10	ATP7B (ENSPPYG00000005385) #11	ALG11 (ENSPPYG00000005386) #13	NEK5 (ENSPPYG00000005387) #14	NEK3 (ENSPPYG00000005388) #15	ENSPPYG00000040254	THSD1 (ENSPPYG00000005389) #17	VPS36 (ENSPPYG00000035721) #18	CKAP2 (ENSPPYG00000005390) #19	ENSPPYG00000031405	SUGT1 (ENSPPYG00000005392) #22	CNMD (ENSPPYG00000005393) #23	PCDH8 (ENSPPYG00000005395) #24	OLFM4 (ENSPPYG00000005396) #25	ENSPPYG00000005397	ENSPPYG00000029935	PCDH17 (ENSPPYG00000029498) #29	ENSPPYG00000040443 ##10	DIAPH3 (ENSPPYG00000005400) #31	TDRD3 (ENSPPYG00000005401) #34	PCDH20 (ENSPPYG00000005403) #36	ENSPPYG00000005404	PCDH9 (ENSPPYG00000005407)	ENSPPYG00000034353	KLHL1 (ENSPPYG00000005408)	DACH1 (ENSPPYG00000005409)
Gibbon	MODERN SPECIES	20	ENSNLEG00000033397	TDRD3 (ENSNLEG00000015920) #34	ENSNLEG00000026620 ##32	DIAPH3 (ENSNLEG00000015843) #31	ENSNLEG00000028379	PCDH17 (ENSNLEG00000015837) #29	ENSNLEG00000035819 #28	ENSNLEG00000033835 #28	ENSNLEG00000034750 #26	OLFM4 (ENSNLEG00000015825) #25	PCDH8 (ENSNLEG00000015818) #24	CNMD (ENSNLEG00000015802) #23	THSD1 (ENSNLEG00000036323) #17	VPS36 (ENSNLEG00000015755) #18	CKAP2 (ENSNLEG00000015724) #19	SUGT1 (ENSNLEG00000015700) #22	NEK3 (ENSNLEG00000004000) #15	ENSNLEG00000003989 #14	ALG11 (ENSNLEG00000003982) #13	ENSNLEG00000018254 ##12	ATP7B (ENSNLEG00000003952) #11	ENSNLEG00000033067 ##10	CCDC70 (ENSNLEG00000018209) #9	ENSNLEG00000030089 #8	ENSNLEG00000003933 #7	WDFY2 (ENSNLEG00000003910)	INTS6 (ENSNLEG00000003898)	SERPINE3 (ENSNLEG00000003888)	FAM124A (ENSNLEG00000003880)	C13orf42 (ENSNLEG00000031949)	ENSNLEG00000003855
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00730000113274 #20	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b.a.b #28	ENSGT00390000001542.b.b #28	ENSGT00390000001542.b.a.a #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000183123.g.b.a.b #21	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00730000113274 #20	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b.a.b #28	ENSGT00390000001542.b.b #28	ENSGT00390000001542.b.a.a #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b
Vervet Monkey	MODERN SPECIES	22	WDFY2 (ENSCSAG00000017689)	ENSCSAG00000018616 #21	DHRS12 (ENSCSAG00000017687) #7	TMEM272 (ENSCSAG00000017686) #8	CCDC70 (ENSCSAG00000018617) #9	ENSCSAG00000017685 #10	ATP7B (ENSCSAG00000017684) #11	ALG11 (ENSCSAG00000017681) #13	UTP14C (ENSCSAG00000018620)	NEK5 (ENSCSAG00000017678) #14	NEK3 (ENSCSAG00000017674) #15	CKAP2 (ENSCSAG00000017670) #19	VPS36 (ENSCSAG00000017665) #18	THSD1 (ENSCSAG00000017662) #17	ENSCSAG00000017660	SUGT1 (ENSCSAG00000017656) #22	CNMD (ENSCSAG00000017652) #23	PCDH8 (ENSCSAG00000017649) #24	OLFM4 (ENSCSAG00000017647) #25	ENSCSAG00000017646 #28	PCDH17 (ENSCSAG00000017645) #29	DIAPH3 (ENSCSAG00000017643) #31	TDRD3 (ENSCSAG00000017640) #34	PCDH20 (ENSCSAG00000017636) #36	PCDH9 (ENSCSAG00000017634)	KLHL1 (ENSCSAG00000017632)	DACH1 (ENSCSAG00000017630)	MZT1 (ENSCSAG00000017627)	BORA (ENSCSAG00000017623)	DIS3 (ENSCSAG00000017617)	PIBF1 (ENSCSAG00000017614)
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.a.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00910000147950	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00730000113274 #20	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00390000001542.b.a.b #28	ENSGT00390000001542.b.b #28	ENSGT00390000001542.b.a.a #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b
Macaca	ANCESTRAL SPECIES	19	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.a.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00910000147950	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00730000113274 #20	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000001542.b.a.b #28	ENSGT00390000001542.b.a.a #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.a.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00910000147950	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00730000113274 #20	ENSGT00940000154335.a.l	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26	ENSGT00440000039914.u.a.b.b	ENSGT01100000263493.a.b.b.a.b.a.a.b.a.a.b	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00390000014660.p	ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.b.a.b	ENSGT00940000155079.b	ENSGT00940000160425
Crab-eating macaque	MODERN SPECIES	8	CCDC70 (ENSMFAG00000060546) #9	ENSMFAG00000045220 #10	ATP7B (ENSMFAG00000001355) #11	UTP14C (ENSMFAG00000033204)	ENSMFAG00000060997	ALG11 (ENSMFAG00000059159) #13	NEK5 (ENSMFAG00000033386) #14	ENSMFAG00000033334	ENSMFAG00000045700	NEK3 (ENSMFAG00000035919) #15	ENSMFAG00000003989	CKAP2 (ENSMFAG00000036763) #19	VPS36 (ENSMFAG00000042233) #18	THSD1 (ENSMFAG00000042000) #17	ENSMFAG00000057930 #20	SUGT1 (ENSMFAG00000035801) #22	CNMD (ENSMFAG00000043190) #23	OLFM4 (ENSMFAG00000045777) #25	ENSMFAG00000048403 #26	ENSMFAG00000050213	ENSMFAG00000032318	ENSMFAG00000062334	ENSMFAG00000051209	ENSMFAG00000051829	ENSMFAG00000055152	PCDH17 (ENSMFAG00000044703) #29	DIAPH3 (ENSMFAG00000045809) #31	ENSMFAG00000052872	ENSMFAG00000000832 #32	TDRD3 (ENSMFAG00000007606) #34	ENSMFAG00000062112
Rhesus	MODERN SPECIES	8	DHRS12 (ENSMMUG00000009420) #7	TMEM272 (ENSMMUG00000062619) #8	CCDC70 (ENSMMUG00000004543) #9	ENSMMUG00000042628 #10	ATP7B (ENSMMUG00000016520) #11	UTP14C (ENSMMUG00000016517)	ALG11 (ENSMMUG00000047340) #13	NEK5 (ENSMMUG00000016523) #14	ENSMMUG00000051386	NEK3 (ENSMMUG00000016530) #15	ENSMMUG00000060162	THSD1 (ENSMMUG00000009528) #17	VPS36 (ENSMMUG00000011360) #18	CKAP2 (ENSMMUG00000018720) #19	ENSMMUG00000007379	SUGT1 (ENSMMUG00000016401) #22	CNMD (ENSMMUG00000016404) #23	PCDH8 (ENSMMUG00000013037) #24	OLFM4 (ENSMMUG00000002657) #25	ENSMMUG00000046683	ENSMMUG00000056301	ENSMMUG00000053637	PCDH17 (ENSMMUG00000022272) #29	ENSMMUG00000062133	DIAPH3 (ENSMMUG00000013780) #31	TDRD3 (ENSMMUG00000007169) #34	PCDH20 (ENSMMUG00000053482) #36	ENSMMUG00000030700	PCDH9 (ENSMMUG00000005620)	ENSMMUG00000052103	KLHL1 (ENSMMUG00000019967)
Pig-tailed macaque	MODERN SPECIES	122																SUGT1 (ENSMNEG00000029322) #22	CNMD (ENSMNEG00000028313) #23	PCDH8 (ENSMNEG00000034818) #24	OLFM4 (ENSMNEG00000033553) #25	ENSMNEG00000033007 #28	ENSMNEG00000031710 #28	ENSMNEG00000038056	PCDH17 (ENSMNEG00000028789) #29	DIAPH3 (ENSMNEG00000029068) #31	ENSMNEG00000025649 #32	TDRD3 (ENSMNEG00000002038) #34	PCDH20 (ENSMNEG00000032795) #36
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000153137.a.b.b.b #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.b #10	ENSGT01100000264729	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.a.a #10	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00730000113274 #20	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000001542.b.a.b #28	ENSGT00390000001542.b.b #28	ENSGT00390000001542.b.a.a #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36
Olive baboon	MODERN SPECIES	6	C13orf42 (ENSPANG00000034970)	FAM124A (ENSPANG00000022783)	SERPINE3 (ENSPANG00000009663)	INTS6 (ENSPANG00000007049)	WDFY2 (ENSPANG00000015000)	DHRS12 (ENSPANG00000031113) #7	TMEM272 (ENSPANG00000029825) #8	CCDC70 (ENSPANG00000045858) #9	ENSPANG00000021861 #10	ATP7B (ENSPANG00000025938) #11	ALG11 (ENSPANG00000023959) #13	UTP14C (ENSPANG00000004998)	NEK5 (ENSPANG00000005102) #14	NEK3 (ENSPANG00000007571) #15	ENSPANG00000044868 #20	SUGT1 (ENSPANG00000025937) #22	CNMD (ENSPANG00000012752) #23	ENSPANG00000041440	PCDH8 (ENSPANG00000007570) #24	ENSPANG00000043462	ENSPANG00000028839	OLFM4 (ENSPANG00000024154) #25	ENSPANG00000048590	ENSPANG00000047232	ENSPANG00000043724	ENSPANG00000047132	ENSPANG00000041871	ENSPANG00000043978	PCDH17 (ENSPANG00000004614) #29	DIAPH3 (ENSPANG00000005861) #31	TDRD3 (ENSPANG00000019138) #34
Cercopithecinae_d	ANCESTRAL SPECIES	185												ENSGT00530000063691.b #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00730000113274 #20	ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000001542.b.a.b #28	ENSGT00390000001542.b.b #28	ENSGT00390000001542.b.a.a #28	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000154343.e.a #32	ENSGT00940000155487 #34	ENSGT00940000156743 #36
Drill	MODERN SPECIES	1726														CKAP2 (ENSMLEG00000043706) #19	ENSMLEG00000032068	SUGT1 (ENSMLEG00000038543) #22	CNMD (ENSMLEG00000041973) #23	PCDH8 (ENSMLEG00000038800) #24	OLFM4 (ENSMLEG00000039916) #25
Sooty mangabey	MODERN SPECIES	118													CKAP2 (ENSCATG00000039671) #19	VPS36 (ENSCATG00000004217) #18	THSD1 (ENSCATG00000028159) #17	SUGT1 (ENSCATG00000042485) #22	CNMD (ENSCATG00000030609) #23	PCDH8 (ENSCATG00000040121) #24	OLFM4 (ENSCATG00000014919) #25	ENSCATG00000014659 #28	ENSCATG00000017094 #28	ENSCATG00000034480 #28	ENSCATG00000016873	PCDH17 (ENSCATG00000005554) #29	ENSCATG00000031566	DIAPH3 (ENSCATG00000000462) #31	ENSCATG00000029126 #32	TDRD3 (ENSCATG00000029498) #34
Rhinopithecus	ANCESTRAL SPECIES	671																ENSGT00390000013700.m #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00910000147138 #26
Black snub-nosed monkey	MODERN SPECIES	1798												ENSRBIG00000007272	CCDC182 (ENSRBIG00000011502)	MRPS23 (ENSRBIG00000029694)	CUEDC1 (ENSRBIG00000030465)	SUGT1 (ENSRBIG00000036770) #22	CNMD (ENSRBIG00000043700) #23	PCDH8 (ENSRBIG00000033747) #24	OLFM4 (ENSRBIG00000032618) #25	ENSRBIG00000042122 #26
Golden snub-nosed monkey	MODERN SPECIES	1944															ENSRROG00000025083	SUGT1 (ENSRROG00000028888) #22	CNMD (ENSRROG00000039433) #23	PCDH8 (ENSRROG00000034109) #24	OLFM4 (ENSRROG00000009923) #25	ENSRROG00000037910 #26
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Hominidae	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Pan	ANCESTRAL SPECIES	2	ENSGT00510000047602.r	ENSGT00940000157131.b	ENSGT00940000157527	ENSGT00940000158391	ENSGT00940000154355.e.a.b.b	ENSGT00940000155488	ENSGT00940000157880	ENSGT00940000154397.b.c.b.b	ENSGT00390000003114.e.b.b	ENSGT00940000160520	ENSGT00510000048725	ENSGT00940000157911	ENSGT00390000008295.b	ENSGT00390000002414.`b.b	ENSGT00390000001827	ENSGT00390000013700.n ##22	ENSGT00950000182901.a.a.b.b.a.b.a.b.b.b	ENSGT00940000159099	ENSGT01020000230359.C.b	ENSGT00950000182942.a.a	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000156148	ENSGT00940000155574.C	ENSGT01100000263628	ENSGT00940000160796	ENSGT00950000183092.b.b	ENSGT00940000159476	ENSGT00390000005727.a.b.a.a.c	ENSGT00940000153370.b
Chimpanzee	MODERN SPECIES	16	ENSPTRG00000048417	RBMS3 (ENSPTRG00000014709)	TGFBR2 (ENSPTRG00000014711)	GADL1 (ENSPTRG00000014712)	ENSPTRG00000051512	STT3B (ENSPTRG00000014713)	OSBPL10 (ENSPTRG00000014714)	ZNF860 (ENSPTRG00000011428)	GPD1L (ENSPTRG00000043993)	CMTM8 (ENSPTRG00000014717)	CMTM7 (ENSPTRG00000014719)	CMTM6 (ENSPTRG00000043555)	DYNC1LI1 (ENSPTRG00000014721)	ENSPTRG00000042309	CNOT10 (ENSPTRG00000014722)	ENSPTRG00000046880 ##22	ENSPTRG00000044387	TRIM71 (ENSPTRG00000030286)	CCR4 (ENSPTRG00000014725)	GLB1 (ENSPTRG00000014726)	CRTAP (ENSPTRG00000014728)	SUSD5 (ENSPTRG00000041864)	FBXL2 (ENSPTRG00000014732)	UBP1 (ENSPTRG00000014733)	CLASP2 (ENSPTRG00000014734)	PDCD6IP (ENSPTRG00000014735)	ARPP21 (ENSPTRG00000014736)	STAC (ENSPTRG00000014737)	DCLK3 (ENSPTRG00000014739)	ENSPTRG00000045315	TRANK1 (ENSPTRG00000014741)
Bonobo	MODERN SPECIES	16	ENSPPAG00000026966	RBMS3 (ENSPPAG00000036519)	TGFBR2 (ENSPPAG00000043674)	GADL1 (ENSPPAG00000027403)	ENSPPAG00000029405	STT3B (ENSPPAG00000027770)	OSBPL10 (ENSPPAG00000042624)	ZNF860 (ENSPPAG00000033453)	GPD1L (ENSPPAG00000037452)	CMTM8 (ENSPPAG00000031220)	ENSPPAG00000034531	CMTM6 (ENSPPAG00000034787)	DYNC1LI1 (ENSPPAG00000036438)	ENSPPAG00000001545	CNOT10 (ENSPPAG00000027061)	ENSPPAG00000033853 ##22	ENSPPAG00000036093	TRIM71 (ENSPPAG00000028362)	CCR4 (ENSPPAG00000008693)	GLB1 (ENSPPAG00000037867)	CRTAP (ENSPPAG00000039721)	SUSD5 (ENSPPAG00000022450)	FBXL2 (ENSPPAG00000031583)	UBP1 (ENSPPAG00000028421)	CLASP2 (ENSPPAG00000024744)	PDCD6IP (ENSPPAG00000029413)	ARPP21 (ENSPPAG00000032910)	ENSPPAG00000043215	STAC (ENSPPAG00000039982)	ENSPPAG00000028394	ENSPPAG00000032170
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00390000013700.n ##22
Cercopithecinae_d	ANCESTRAL SPECIES	16	ENSGT00390000018696.m.a	ENSGT00940000153704.A	ENSGT00560000077278.b	ENSGT00940000157131.b	ENSGT00940000157527	ENSGT00940000158391	ENSGT00940000155488	ENSGT00940000157880	ENSGT00390000003114.e.b.b	ENSGT00940000160520	ENSGT00510000048725	ENSGT00940000157911.a	ENSGT00390000008295.b	ENSGT00390000002414.`b.b	ENSGT00950000183030.m.a.a.b.b.b.a.a	ENSGT00390000013700.n ##22	ENSGT00390000001827	ENSGT00940000159099	ENSGT01020000230359.C.b	ENSGT00950000182942.a.a	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000156148	ENSGT00940000155574.C	ENSGT01100000263628	ENSGT00500000045558.b	ENSGT00940000160796	ENSGT00950000183092.b.b	ENSGT00950000182930.B	ENSGT00940000153404.a.m.a.b
Sooty mangabey	MODERN SPECIES	458						ENSCATG00000035101	STT3B (ENSCATG00000034285)	OSBPL10 (ENSCATG00000038263)	GPD1L (ENSCATG00000038775)	CMTM8 (ENSCATG00000033422)	CMTM7 (ENSCATG00000014394)	ENSCATG00000030998	DYNC1LI1 (ENSCATG00000041634)	ENSCATG00000039673	ENSCATG00000000280	ENSCATG00000032297 ##22	CNOT10 (ENSCATG00000034330)	TRIM71 (ENSCATG00000039860)	CCR4 (ENSCATG00000006477)	GLB1 (ENSCATG00000030809)	ENSCATG00000008562	ENSCATG00000041937	ENSCATG00000033646	FBXL2 (ENSCATG00000036185)	UBP1 (ENSCATG00000038795)	CLASP2 (ENSCATG00000037976)	PDCD6IP (ENSCATG00000039590)	ENSCATG00000039078	ARPP21 (ENSCATG00000032088)	STAC (ENSCATG00000043527)	KNG1 (ENSCATG00000033074)
Drill	MODERN SPECIES	135	AZI2 (ENSMLEG00000030403)	ZCWPW2 (ENSMLEG00000014767)	ENSMLEG00000040868	ENSMLEG00000030106	RBMS3 (ENSMLEG00000029464)	TGFBR2 (ENSMLEG00000042351)	GADL1 (ENSMLEG00000031909)	STT3B (ENSMLEG00000022321)	OSBPL10 (ENSMLEG00000037148)	GPD1L (ENSMLEG00000038588)	CMTM8 (ENSMLEG00000034473)	CMTM7 (ENSMLEG00000044447)	ENSMLEG00000042948	DYNC1LI1 (ENSMLEG00000042539)	ENSMLEG00000000509	ENSMLEG00000035019 ##22	CNOT10 (ENSMLEG00000030183)
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00390000003838	ENSGT00590000083134.a.a	ENSGT00940000160941	ENSGT00390000016655.a.a.b	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00530000063691.b.e #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Cebidae	ANCESTRAL SPECIES	26	ENSGT00390000003838	ENSGT00590000083134.a.a	ENSGT00940000160941	ENSGT00390000016655.a.a.b	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00390000008142.j	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00530000063691.b.e #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000001542.b #28	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00390000011439.m.b	ENSGT00390000003838	ENSGT00590000083134.a.a	ENSGT00940000160941	ENSGT00390000016655.a.a.b	ENSGT00940000158527	ENSGT00940000163782 #7	ENSGT01100000263647 #8	ENSGT00940000155749.d #11	ENSGT00550000075118 #13	ENSGT00940000160136 #14	ENSGT00940000159738 #15	ENSGT00530000063691.b.e #19	ENSGT00390000017209 #18	ENSGT00390000013335 #17	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00680000100037.g.a.b.a
Bolivian squirrel monkey	MODERN SPECIES	63	RNASEH2B (ENSSBOG00000008081)	C13orf42 (ENSSBOG00000031577)	FAM124A (ENSSBOG00000035613)	SERPINE3 (ENSSBOG00000029656)	INTS6 (ENSSBOG00000032866)	WDFY2 (ENSSBOG00000026224)	DHRS12 (ENSSBOG00000025811) #7	TMEM272 (ENSSBOG00000017800) #8	ATP7B (ENSSBOG00000019143) #11	ALG11 (ENSSBOG00000025785) #13	NEK5 (ENSSBOG00000022077) #14	NEK3 (ENSSBOG00000000400) #15	ENSSBOG00000030069 #19	VPS36 (ENSSBOG00000026910) #18	THSD1 (ENSSBOG00000030038) #17	SUGT1 (ENSSBOG00000021986) #22	CNMD (ENSSBOG00000023377) #23	PCDH8 (ENSSBOG00000021479) #24	ENSSBOG00000023112	OLFM4 (ENSSBOG00000027885) #25	PCDH17 (ENSSBOG00000034362) #29	ENSSBOG00000013376	DIAPH3 (ENSSBOG00000004499) #31	TDRD3 (ENSSBOG00000022790) #34	PCDH20 (ENSSBOG00000022134) #36	PCDH9 (ENSSBOG00000023648)	ENSSBOG00000029606	ENSSBOG00000030129	KLHL1 (ENSSBOG00000019967)	ENSSBOG00000020963	LRATD1 (ENSSBOG00000015385)
Capuchin	MODERN SPECIES	453											NEK5 (ENSCCAG00000027070) #14	NEK3 (ENSCCAG00000034558) #15	ENSCCAG00000024823 #19	VPS36 (ENSCCAG00000026212) #18	THSD1 (ENSCCAG00000025608) #17	SUGT1 (ENSCCAG00000002551) #22	CNMD (ENSCCAG00000032711) #23	PCDH8 (ENSCCAG00000023029) #24	OLFM4 (ENSCCAG00000026067) #25
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES		ENSCJAG00000084286	ATP7B (ENSCJAG00000008347) #11	ENSCJAG00000043055	ENSCJAG00000072532	ENSCJAG00000084063 #17	ENSCJAG00000081654 #19	ENSCJAG00000080418 #18	ENSCJAG00000008414	ALG11 (ENSCJAG00000036951) #13	ENSCJAG00000078533 #17	ENSCJAG00000055329 #14	NEK3 (ENSCJAG00000073411) #15	ENSCJAG00000071385 #19	ENSCJAG00000047301	ENSCJAG00000083123 #18	ENSCJAG00000003604 #22	CNMD (ENSCJAG00000003648) #23	PCDH8 (ENSCJAG00000045669) #24	OLFM4 (ENSCJAG00000003690) #25	ENSCJAG00000003713 #28	ENSCJAG00000080780	ENSCJAG00000083356	PCDH17 (ENSCJAG00000003715) #29	ENSCJAG00000071744	ENSCJAG00000085937	ENSCJAG00000071873	ENSCJAG00000073048	ENSCJAG00000056633	DIAPH3 (ENSCJAG00000003729) #31	ENSCJAG00000052430	ENSCJAG00000081668
Marmoset	MODERN SPECIES	4	PRELID3A (ENSCJAG00000004931)	SPIRE1 (ENSCJAG00000004952)	CEP76 (ENSCJAG00000005028)	PSMG2 (ENSCJAG00000005007)	ENSCJAG00000082828	PTPN2 (ENSCJAG00000005102)	CEP192 (ENSCJAG00000005208)	ENSCJAG00000086861	ENSCJAG00000077541	LDLRAD4 (ENSCJAG00000005295)	FAM210A (ENSCJAG00000040371)	RNMT (ENSCJAG00000041136)	ENSCJAG00000085775	ENSCJAG00000077536	HGSNAT (ENSCJAG00000003561)	ENSCJAG00000023305 #22	POMK (ENSCJAG00000037203)	FNTA (ENSCJAG00000003507)	HOOK3 (ENSCJAG00000003487)	RNF170 (ENSCJAG00000047550)	THAP1 (ENSCJAG00000038318)	CHRNA6 (ENSCJAG00000007684)	ENSCJAG00000022714	CHRNB3 (ENSCJAG00000007709)	ENSCJAG00000078082	ENSCJAG00000077828	AP3M2 (ENSCJAG00000007751)	PLAT (ENSCJAG00000007769)	IKBKB (ENSCJAG00000007805)	POLB (ENSCJAG00000007917)	DKK4 (ENSCJAG00000007996)
Mas night monkey	MODERN SPECIES	797	INTS6 (ENSANAG00000024926)	WDFY2 (ENSANAG00000028501)	DHRS12 (ENSANAG00000025585) #7	TMEM272 (ENSANAG00000018992) #8	ATP7B (ENSANAG00000020156) #11	ENSANAG00000020622	ALG11 (ENSANAG00000027009) #13	UTP14C (ENSANAG00000038103)	NEK5 (ENSANAG00000038153) #14	ENSANAG00000023644	NEK3 (ENSANAG00000027992) #15	CKAP2 (ENSANAG00000037303) #19	VPS36 (ENSANAG00000023245) #18	THSD1 (ENSANAG00000038235) #17	ENSANAG00000023763	SUGT1 (ENSANAG00000027582) #22	CNMD (ENSANAG00000030621) #23	PCDH8 (ENSANAG00000035440) #24	OLFM4 (ENSANAG00000036698) #25
Tarsier	MODERN SPECIES	4795															ELF1 (ENSTSYG00000035671)	SUGT1 (ENSTSYG00000008879) #22	CNMD (ENSTSYG00000000040) #23
Strepsirrhini	ANCESTRAL SPECIES	27	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Lemuriformes	DUPLICATION
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700.i #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Mouse lemur	MODERN SPECIES	4	DNAJC15 (ENSMICG00000036429)	EPSTI1 (ENSMICG00000007681)	FAM216B (ENSMICG00000007430)	TNFSF11 (ENSMICG00000028647)	AKAP11 (ENSMICG00000027504)	DGKH (ENSMICG00000017492)	ENSMICG00000043956	ENSMICG00000030374	VWA8 (ENSMICG00000017491)	RGCC (ENSMICG00000027653)	NAA16 (ENSMICG00000017489)	MTRF1 (ENSMICG00000033131)	KBTBD7 (ENSMICG00000014566)	WBP4 (ENSMICG00000047481)	ELF1 (ENSMICG00000035688)	SUGT1 (ENSMICG00000014614) #22	CNMD (ENSMICG00000038059) #23	PCDH8 (ENSMICG00000014653) #24	ENSMICG00000036582	OLFM4 (ENSMICG00000001798) #25	ENSMICG00000028372 #30	PCDH17 (ENSMICG00000008032) #29	DIAPH3 (ENSMICG00000011388) #31	ENSMICG00000043260	TDRD3 (ENSMICG00000009982) #34	PCDH20 (ENSMICG00000032560) #36	ENSMICG00000038136	ENSMICG00000045460	PCDH9 (ENSMICG00000002338)	ENSMICG00000026328	KLHL1 (ENSMICG00000005245)
Lemuriformes_a	ANCESTRAL SPECIES	41	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700.i #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25
Greater bamboo lemur	MODERN SPECIES	453														WBP4 (ENSPSMG00000005653)	ELF1 (ENSPSMG00000005676)	SUGT1 (ENSPSMG00000005716) #22	CNMD (ENSPSMG00000005737) #23	PCDH8 (ENSPSMG00000005751) #24	OLFM4 (ENSPSMG00000005755) #25
Coquerels sifaka	MODERN SPECIES	87	CCDC122 (ENSPCOG00000009651)	ENOX1 (ENSPCOG00000018853)	EPSTI1 (ENSPCOG00000012615)	FAM216B (ENSPCOG00000014171)	TNFSF11 (ENSPCOG00000028435)	AKAP11 (ENSPCOG00000024999)	DGKH (ENSPCOG00000026563)	VWA8 (ENSPCOG00000014732)	RGCC (ENSPCOG00000020015)	NAA16 (ENSPCOG00000015796)	ENSPCOG00000015826	MTRF1 (ENSPCOG00000018133)	KBTBD7 (ENSPCOG00000005378)	ENSPCOG00000028102	ELF1 (ENSPCOG00000027239)	ENSPCOG00000019843 #22	CNMD (ENSPCOG00000018163) #23	PCDH8 (ENSPCOG00000014333) #24	OLFM4 (ENSPCOG00000017430) #25
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00390000013700.j #22
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT00390000013700.j #22
Coquerels sifaka	MODERN SPECIES	345			TENT5A (ENSPCOG00000014245)	BCKDHB (ENSPCOG00000001558)	TTK (ENSPCOG00000020369)	ELOVL4 (ENSPCOG00000027157)	SH3BGRL2 (ENSPCOG00000010718)	LCA5 (ENSPCOG00000026990)	HMGN3 (ENSPCOG00000020626)	ENSPCOG00000027594	PHIP (ENSPCOG00000025776)	IRAK1BP1 (ENSPCOG00000018402)	MEI4 (ENSPCOG00000023963)	HTR1B (ENSPCOG00000014248)	ENSPCOG00000021537	ENSPCOG00000007245 #22	IMPG1 (ENSPCOG00000013809)	MYO6 (ENSPCOG00000016731)	SENP6 (ENSPCOG00000021433)	ENSPCOG00000008115	FILIP1 (ENSPCOG00000023751)	TMEM30A (ENSPCOG00000017026)	COX7A2 (ENSPCOG00000021379)	COL12A1 (ENSPCOG00000026081)	ENSPCOG00000026844 ##35	CD109 (ENSPCOG00000015200)	SLC17A5 (ENSPCOG00000014513)	ENSPCOG00000026320	ENSPCOG00000027789	MTO1 (ENSPCOG00000019343)	CGAS (ENSPCOG00000020974)
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	155								VWA8 (ENSOGAG00000014073)	RGCC (ENSOGAG00000014070)	NAA16 (ENSOGAG00000007188)	ENSOGAG00000009719	KBTBD7 (ENSOGAG00000024425)	ENSOGAG00000024163	WBP4 (ENSOGAG00000015224)	ELF1 (ENSOGAG00000006754)	ENSOGAG00000008220 #22	CNMD (ENSOGAG00000015188) #23	PCDH8 (ENSOGAG00000000829) #24	OLFM4 (ENSOGAG00000010443) #25	ENSOGAG00000030682	PCDH17 (ENSOGAG00000034022) #29	ENSOGAG00000028793	DIAPH3 (ENSOGAG00000001667) #31	TDRD3 (ENSOGAG00000005898) #34	PCDH20 (ENSOGAG00000004914) #36	PCDH9 (ENSOGAG00000011570)	ENSOGAG00000030862
Bushbaby	MODERN SPECIES	143							AHR (ENSOGAG00000012656)	SNX13 (ENSOGAG00000001781)	HDAC9 (ENSOGAG00000007864)	FERD3L (ENSOGAG00000014773)	POLR1F (ENSOGAG00000009189)	TMEM196 (ENSOGAG00000009193)	MACC1 (ENSOGAG00000006910)	ITGB8 (ENSOGAG00000003839)	ABCB5 (ENSOGAG00000009068)	ENSOGAG00000025614 #22	ENSOGAG00000026884	SP4 (ENSOGAG00000007284)	DNAH11 (ENSOGAG00000009835)	CDCA7L (ENSOGAG00000009860)	RAPGEF5 (ENSOGAG00000013911)	ENSOGAG00000004177	ENSOGAG00000029286	HYCC1 (ENSOGAG00000002456)	KLHL7 (ENSOGAG00000017098)	NUP42 (ENSOGAG00000017153)	GPNMB (ENSOGAG00000017155)	MALSU1 (ENSOGAG00000017157)	IGF2BP3 (ENSOGAG00000017159)	TRA2A (ENSOGAG00000009733)	CCDC126 (ENSOGAG00000024333)
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Tree shrew	MODERN SPECIES	3321																ENSTBEG00000016358 #22
Glires	ANCESTRAL SPECIES	22	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Lagomorpha	ANCESTRAL SPECIES	56	ENSGT00390000000693	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Pika	MODERN SPECIES	1377																ENSOPRG00000013040 #22	CNMD (ENSOPRG00000013066) #23
Rodentia	ANCESTRAL SPECIES	22	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Muroidea	ANCESTRAL SPECIES	25	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	3	Tnfsf11 (ENSCGRG00001013327)	Akap11 (ENSCGRG00001020906)	Dgkh (ENSCGRG00001012161)	Vwa8 (ENSCGRG00001023461)	ENSCGRG00001017855	ENSCGRG00001011992	Rgcc (ENSCGRG00001010708)	Naa16 (ENSCGRG00001023139)	ENSCGRG00001008906	Mtrf1 (ENSCGRG00001003065)	Kbtbd7 (ENSCGRG00001022213)	ENSCGRG00001000650	ENSCGRG00001009361	Wbp4 (ENSCGRG00001002031)	Elf1 (ENSCGRG00001016200)	ENSCGRG00001022636 #22	Cnmd (ENSCGRG00001001658) #23	Pcdh8 (ENSCGRG00001015602) #24	Olfm4 (ENSCGRG00001022304) #25	ENSCGRG00001014173	ENSCGRG00001017435	Pcdh17 (ENSCGRG00001009409) #29	Diaph3 (ENSCGRG00001019022) #31	Tdrd3 (ENSCGRG00001011297) #34	Pcdh20 (ENSCGRG00001021707) #36	ENSCGRG00001009641	ENSCGRG00001021714	ENSCGRG00001017222	Pcdh9 (ENSCGRG00001013105)	ENSCGRG00001023250	ENSCGRG00001005685
Chinese hamster chok1gshd	MODERN SPECIES	317	Tubal3 (ENSCGRG00001014040)	Net1 (ENSCGRG00001024023)	ENSCGRG00001003006	Calml3 (ENSCGRG00001004814)	Asb13 (ENSCGRG00001017161)	Tasor2 (ENSCGRG00001022713)	ENSCGRG00001013447	Ankrd16 (ENSCGRG00001022174)	Fbh1 (ENSCGRG00001018795)	Il15ra (ENSCGRG00001019754)	Il2ra (ENSCGRG00001018300)	Rbm17 (ENSCGRG00001013842)	Pfkfb3 (ENSCGRG00001024989)	Prkcq (ENSCGRG00001015284)	Sfmbt2 (ENSCGRG00001019695)	ENSCGRG00001012806 #22	Itih5 (ENSCGRG00001001499)	Itih2 (ENSCGRG00001023637)	Kin (ENSCGRG00001018259)	Atp5c1 (ENSCGRG00001013869)	Taf3 (ENSCGRG00001000287)	ENSCGRG00001021895	ENSCGRG00001016342	Gata3 (ENSCGRG00001011803)	Celf2 (ENSCGRG00001015058)	Usp6nl (ENSCGRG00001016478)	Echdc3 (ENSCGRG00001013214)	Proser2 (ENSCGRG00001024939)	Upf2 (ENSCGRG00001019347)	Dhtkd1 (ENSCGRG00001016298)	Sec61a2 (ENSCGRG00001017484)
Golden Hamster	MODERN SPECIES	642	ENSMAUG00000013996	Enox1 (ENSMAUG00000019233)	Dnajc15 (ENSMAUG00000009642)	Epsti1 (ENSMAUG00000018985)	Fam216b (ENSMAUG00000014549)	Tnfsf11 (ENSMAUG00000001005)	Akap11 (ENSMAUG00000016985)	Dgkh (ENSMAUG00000017457)	Vwa8 (ENSMAUG00000020740)	Rgcc (ENSMAUG00000020733)	Mtrf1 (ENSMAUG00000011661)	Kbtbd7 (ENSMAUG00000004183)	Kbtbd6 (ENSMAUG00000000372)	Wbp4 (ENSMAUG00000018253)	Elf1 (ENSMAUG00000012901)	Sugt1 (ENSMAUG00000011244) #22	Cnmd (ENSMAUG00000021944) #23	Pcdh8 (ENSMAUG00000017769) #24	Olfm4 (ENSMAUG00000013134) #25	ENSMAUG00000010405	Pcdh17 (ENSMAUG00000008572) #29	Diaph3 (ENSMAUG00000015519) #31	Tdrd3 (ENSMAUG00000012562) #34	Pcdh20 (ENSMAUG00000011323) #36	ENSMAUG00000007990
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00990000212586	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Northern American deer mouse	DUPLICATION
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	1	Mrps24 (ENSPEMG00000012062)	Urgcp (ENSPEMG00000018952)	ENSPEMG00000010442	Dbnl (ENSPEMG00000002008)	Pgam2 (ENSPEMG00000016914)	Polm (ENSPEMG00000013953)	Pold2 (ENSPEMG00000016023)	Myl7 (ENSPEMG00000003767)	Gck (ENSPEMG00000001040)	Ykt6 (ENSPEMG00000012487)	Camk2b (ENSPEMG00000000806)	Nudcd3 (ENSPEMG00000014178)	Npc1l1 (ENSPEMG00000014976)	Ddx56 (ENSPEMG00000018351)	Tmed4 (ENSPEMG00000004413)	ENSPEMG00000030252 #22	Ogdh (ENSPEMG00000001741)	Zmiz2 (ENSPEMG00000010648)	H2az2 (ENSPEMG00000013226)	Purb (ENSPEMG00000014786)	ENSPEMG00000018930	Myo1g (ENSPEMG00000013479)	Ccm2 (ENSPEMG00000018848)	Nacad (ENSPEMG00000005783)	Tbrg4 (ENSPEMG00000009444)	Wap (ENSPEMG00000018530)	Ramp3 (ENSPEMG00000017259)	Adcy1 (ENSPEMG00000010818)	Ccdc201 (ENSPEMG00000018869)	Igfbp1 (ENSPEMG00000013560)	Igfbp3 (ENSPEMG00000031297)
Northern American deer mouse	MODERN SPECIES	19	Pigk (ENSPEMG00000021402)	Ak5 (ENSPEMG00000021131)	Zzz3 (ENSPEMG00000022306)	Usp33 (ENSPEMG00000022686)	Miga1 (ENSPEMG00000010727)	ENSPEMG00000029947	Fubp1 (ENSPEMG00000021802)	Dnajb4 (ENSPEMG00000021113)	Gipc2 (ENSPEMG00000009983)	Ptgfr (ENSPEMG00000029819)	ENSPEMG00000030105	Ifi44 (ENSPEMG00000020837)	Adgrl4 (ENSPEMG00000020379)	ENSPEMG00000030917	Adgrl2 (ENSPEMG00000021407)	ENSPEMG00000022352 #22	Ttll7 (ENSPEMG00000021600)	ENSPEMG00000024491	Prkacb (ENSPEMG00000030921)	4930503B20Rik (ENSPEMG00000023951)	ENSPEMG00000028095	Uox (ENSPEMG00000023036)	Dnase2b (ENSPEMG00000023363)	Rpf1 (ENSPEMG00000023196)	Spata1 (ENSPEMG00000023282)	Ctbs (ENSPEMG00000006184)	Ssx2ip (ENSPEMG00000023032)	Lpar3 (ENSPEMG00000022406)	Mcoln2 (ENSPEMG00000015343)	Mcoln3 (ENSPEMG00000014566)	Dnai3 (ENSPEMG00000023437)
Northern American deer mouse	MODERN SPECIES	22	Ccdc122 (ENSPEMG00000013832)	Enox1 (ENSPEMG00000009188)	Dnajc15 (ENSPEMG00000017585)	Epsti1 (ENSPEMG00000012785)	Fam216b (ENSPEMG00000010168)	Tnfsf11 (ENSPEMG00000026330)	Akap11 (ENSPEMG00000017768)	Dgkh (ENSPEMG00000020442)	Vwa8 (ENSPEMG00000016456)	Rgcc (ENSPEMG00000013380)	Naa16 (ENSPEMG00000021265)	Mtrf1 (ENSPEMG00000020982)	Kbtbd7 (ENSPEMG00000015250)	Wbp4 (ENSPEMG00000021764)	Elf1 (ENSPEMG00000021551)	ENSPEMG00000001486 #22	Cnmd (ENSPEMG00000001366) #23	Pcdh8 (ENSPEMG00000002218) #24	Olfm4 (ENSPEMG00000018107) #25	ENSPEMG00000008810	Pcdh17 (ENSPEMG00000029088) #29	ENSPEMG00000012614	ENSPEMG00000008782	Diaph3 (ENSPEMG00000013687) #31	Tdrd3 (ENSPEMG00000004287) #34	Pcdh20 (ENSPEMG00000000491) #36	Pcdh9 (ENSPEMG00000019867)	ENSPEMG00000028743	Spertl (ENSPEMG00000020149) ##9	ENSPEMG00000025539	Klhl1 (ENSPEMG00000019703)
Prairie vole	MODERN SPECIES	89											Naa16 (ENSMOCG00000013086)	Mtrf1 (ENSMOCG00000011945)	Kbtbd7 (ENSMOCG00000004494)	Wbp4 (ENSMOCG00000012721)	Elf1 (ENSMOCG00000000165)	Sugt1 (ENSMOCG00000002097) #22	Cnmd (ENSMOCG00000001113) #23	Pcdh8 (ENSMOCG00000020531) #24	Olfm4 (ENSMOCG00000016963) #25	ENSMOCG00000019804	Pcdh17 (ENSMOCG00000004856) #29	ENSMOCG00000011873	Diaph3 (ENSMOCG00000012431) #31	Tdrd3 (ENSMOCG00000012962) #34	Pcdh20 (ENSMOCG00000008392) #36	Poln (ENSMOCG00000009309)	Nat8l (ENSMOCG00000017447)	Gm1673 (ENSMOCG00000020620)	Nelfa (ENSMOCG00000000669)	Nsd2 (ENSMOCG00000008250)	Letm1 (ENSMOCG00000012830)
Murinae	ANCESTRAL SPECIES	16	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Mus	ANCESTRAL SPECIES	8	ENSGT00860000135855	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00860000135986	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00940000157896.f	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00860000135986	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00940000157896.f	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00860000135986	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Mouse	MODERN SPECIES	5	Dnajc15 (ENSMUSG00000022013)	Epsti1 (ENSMUSG00000022014)	Fam216b (ENSMUSG00000045655)	Tnfsf11 (ENSMUSG00000022015)	Akap11 (ENSMUSG00000022016)	Dgkh (ENSMUSG00000034731)	Vwa8 (ENSMUSG00000058997)	Zfp957 (ENSMUSG00000071262)	Rgcc (ENSMUSG00000022018)	Naa16 (ENSMUSG00000022020)	Mtrf1 (ENSMUSG00000022022)	Kbtbd7 (ENSMUSG00000043881)	Kbtbd6 (ENSMUSG00000075502)	Wbp4 (ENSMUSG00000022023)	Elf1 (ENSMUSG00000036461)	Sugt1 (ENSMUSG00000022024) #22	Cnmd (ENSMUSG00000022025) #23	Pcdh8 (ENSMUSG00000036422) #24	Olfm4 (ENSMUSG00000022026) #25	Pcdh17 (ENSMUSG00000035566) #29	Diaph3 (ENSMUSG00000022021) #31	Tdrd3 (ENSMUSG00000022019) #34	Pcdh20 (ENSMUSG00000050505) #36	Pcdh9 (ENSMUSG00000055421)	Spertl (ENSMUSG00000034689) ##9	Klhl1 (ENSMUSG00000022076)	Dach1 (ENSMUSG00000055639)	Mzt1 (ENSMUSG00000033186)	Bora (ENSMUSG00000022070)	Dis3 (ENSMUSG00000033166)	Pibf1 (ENSMUSG00000022064)
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00940000157896.f	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00860000135986	ENSGT00940000155454 #25	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711.e.a
spretus	MODERN SPECIES	5	MGP_SPRETEiJ_G0020424	Dnajc15 (MGP_SPRETEiJ_G0020425)	Epsti1 (MGP_SPRETEiJ_G0020426)	Fam216b (MGP_SPRETEiJ_G0020427)	Tnfsf11 (MGP_SPRETEiJ_G0020428)	Akap11 (MGP_SPRETEiJ_G0020429)	Dgkh (MGP_SPRETEiJ_G0020430)	Vwa8 (MGP_SPRETEiJ_G0020431)	Zfp957 (MGP_SPRETEiJ_G0020432)	Rgcc (MGP_SPRETEiJ_G0020433)	Naa16 (MGP_SPRETEiJ_G0020434)	Mtrf1 (MGP_SPRETEiJ_G0020435)	MGP_SPRETEiJ_G0020436	Wbp4 (MGP_SPRETEiJ_G0020437)	Elf1 (MGP_SPRETEiJ_G0020438)	Sugt1 (MGP_SPRETEiJ_G0020439) #22	Cnmd (MGP_SPRETEiJ_G0020440) #23	Pcdh8 (MGP_SPRETEiJ_G0020441) #24	MGP_SPRETEiJ_G0020442	Olfm4 (MGP_SPRETEiJ_G0020443) #25	MGP_SPRETEiJ_G0020444	Pcdh17 (MGP_SPRETEiJ_G0020445) #29	MGP_SPRETEiJ_G0020446	Diaph3 (MGP_SPRETEiJ_G0020447) #31	Tdrd3 (MGP_SPRETEiJ_G0020448) #34	Pcdh20 (MGP_SPRETEiJ_G0020449) #36	Pcdh9 (MGP_SPRETEiJ_G0020450)	Spertl (MGP_SPRETEiJ_G0020451) ##9	Klhl1 (MGP_SPRETEiJ_G0020452)	Dach1 (MGP_SPRETEiJ_G0020453)	Mzt1 (MGP_SPRETEiJ_G0020454)
Steppe mouse	MODERN SPECIES	3281																Sugt1 (ENSMSIG00000002454) #22	ENSMSIG00000002400 #23	ENSMSIG00000002358	Pcdh8 (ENSMSIG00000002286) #24	Olfm4 (ENSMSIG00000002230) #25
Ryukyu mouse	MODERN SPECIES	5	Dnajc15 (MGP_CAROLIEiJ_G0019529)	Epsti1 (MGP_CAROLIEiJ_G0019530)	Fam216b (MGP_CAROLIEiJ_G0019531)	Tnfsf11 (MGP_CAROLIEiJ_G0019532)	Akap11 (MGP_CAROLIEiJ_G0019533)	Dgkh (MGP_CAROLIEiJ_G0019534)	Vwa8 (MGP_CAROLIEiJ_G0019535)	MGP_CAROLIEiJ_G0019536	Rgcc (MGP_CAROLIEiJ_G0019537)	Naa16 (MGP_CAROLIEiJ_G0019538)	Mtrf1 (MGP_CAROLIEiJ_G0019539)	Kbtbd7 (MGP_CAROLIEiJ_G0019540)	MGP_CAROLIEiJ_G0019541	Wbp4 (MGP_CAROLIEiJ_G0019542)	Elf1 (MGP_CAROLIEiJ_G0019543)	Sugt1 (MGP_CAROLIEiJ_G0019544) #22	Cnmd (MGP_CAROLIEiJ_G0019545) #23	Pcdh8 (MGP_CAROLIEiJ_G0019546) #24	MGP_CAROLIEiJ_G0019547	Olfm4 (MGP_CAROLIEiJ_G0019548) #25	Pcdh17 (MGP_CAROLIEiJ_G0019549) #29	Diaph3 (MGP_CAROLIEiJ_G0019550) #31	Tdrd3 (MGP_CAROLIEiJ_G0019551) #34	Pcdh20 (MGP_CAROLIEiJ_G0019553) #36	Pcdh9 (MGP_CAROLIEiJ_G0019554)	Spertl (MGP_CAROLIEiJ_G0019555) ##9	Klhl1 (MGP_CAROLIEiJ_G0019556)	Dach1 (MGP_CAROLIEiJ_G0019557)	Mzt1 (MGP_CAROLIEiJ_G0019558)	Bora (MGP_CAROLIEiJ_G0019559)	Dis3 (MGP_CAROLIEiJ_G0019560)
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0030546	Dnajc15 (MGP_PahariEiJ_G0030547)	Epsti1 (MGP_PahariEiJ_G0030548)	Fam216b (MGP_PahariEiJ_G0030549)	Tnfsf11 (MGP_PahariEiJ_G0030550)	Akap11 (MGP_PahariEiJ_G0030551)	Dgkh (MGP_PahariEiJ_G0030552)	Vwa8 (MGP_PahariEiJ_G0030553)	Rgcc (MGP_PahariEiJ_G0030555)	Naa16 (MGP_PahariEiJ_G0030556)	Mtrf1 (MGP_PahariEiJ_G0030557)	Kbtbd7 (MGP_PahariEiJ_G0030558)	MGP_PahariEiJ_G0030559	MGP_PahariEiJ_G0030560	Elf1 (MGP_PahariEiJ_G0030561)	Sugt1 (MGP_PahariEiJ_G0030562) #22	Cnmd (MGP_PahariEiJ_G0030563) #23	Pcdh8 (MGP_PahariEiJ_G0030564) #24	MGP_PahariEiJ_G0030565	Olfm4 (MGP_PahariEiJ_G0030566) #25	Pcdh17 (MGP_PahariEiJ_G0030567) #29	Diaph3 (MGP_PahariEiJ_G0030568) #31	Tdrd3 (MGP_PahariEiJ_G0030569) #34	Pcdh20 (MGP_PahariEiJ_G0030570) #36	Pcdh9 (MGP_PahariEiJ_G0030571)	Spertl (MGP_PahariEiJ_G0030572) ##9	Klhl1 (MGP_PahariEiJ_G0030573)	Dach1 (MGP_PahariEiJ_G0030574)	Mzt1 (MGP_PahariEiJ_G0030575)	Bora (MGP_PahariEiJ_G0030576)	Dis3 (MGP_PahariEiJ_G0030577)
Rat	MODERN SPECIES	6	Epsti1 (ENSRNOG00000009471)	Fam216b (ENSRNOG00000021943)	Tnfsf11 (ENSRNOG00000071047)	Akap11 (ENSRNOG00000009987)	Dgkh (ENSRNOG00000010065)	Vwa8 (ENSRNOG00000053145)	ENSRNOG00000064147	Rgcc (ENSRNOG00000042960)	ENSRNOG00000067430	Naa16 (ENSRNOG00000045863)	Mtrf1 (ENSRNOG00000047106)	Kbtbd7 (ENSRNOG00000064764)	Kbtbd6 (ENSRNOG00000011657)	Wbp4 (ENSRNOG00000011678)	Elf1 (ENSRNOG00000011762)	Sugt1 (ENSRNOG00000012594) #22	ENSRNOG00000029808	AC123280.1 (ENSRNOG00000033141)	Cnmd (ENSRNOG00000012821) #23	Pcdh8 (ENSRNOG00000013101) #24	Olfm4 (ENSRNOG00000013280) #25	LOC306079 (ENSRNOG00000031061)	LOC100361180 (ENSRNOG00000048927)	Calm2 (ENSRNOG00000030871)	AABR07018627.1 (ENSRNOG00000038122)	AABR07018646.1 (ENSRNOG00000033366)	Pcdh17 (ENSRNOG00000008970) #29	AABR07018132.1 (ENSRNOG00000045597)	AABR07018556.1 (ENSRNOG00000049650)	Diaph3 (ENSRNOG00000008986) #31	Tdrd3 (ENSRNOG00000009034) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1698	Dnajc15 (ENSNGAG00000012778)	Epsti1 (ENSNGAG00000020070)	Fam216b (ENSNGAG00000008030)	ENSNGAG00000009242	Tnfsf11 (ENSNGAG00000023783)	Akap11 (ENSNGAG00000010398)	Dgkh (ENSNGAG00000024075)	Vwa8 (ENSNGAG00000010244)	Rgcc (ENSNGAG00000022423)	Naa16 (ENSNGAG00000004140)	Mtrf1 (ENSNGAG00000014460)	Kbtbd7 (ENSNGAG00000011545)	Kbtbd6 (ENSNGAG00000012119)	Wbp4 (ENSNGAG00000024369)	Elf1 (ENSNGAG00000023108)	Sugt1 (ENSNGAG00000021964) #22	Cnmd (ENSNGAG00000022665) #23	ENSNGAG00000023431	Pcdh8 (ENSNGAG00000000936) #24	Olfm4 (ENSNGAG00000013517) #25	ENSNGAG00000022145	ENSNGAG00000023820
Lesser Egyptian jerboa	MODERN SPECIES	43	Phox2a (ENSJJAG00000011355)	Clpb (ENSJJAG00000010825)	Enox1 (ENSJJAG00000022161)	Dnajc15 (ENSJJAG00000003576)	ENSJJAG00000009640	Fam216b (ENSJJAG00000018229)	Tnfsf11 (ENSJJAG00000000831)	Akap11 (ENSJJAG00000005221)	Dgkh (ENSJJAG00000015395)	Vwa8 (ENSJJAG00000021301)	Rgcc (ENSJJAG00000020348)	Mtrf1 (ENSJJAG00000017590)	ENSJJAG00000001187	Wbp4 (ENSJJAG00000014406)	Elf1 (ENSJJAG00000018266)	Sugt1 (ENSJJAG00000017869) #22	Cnmd (ENSJJAG00000011534) #23	Pcdh8 (ENSJJAG00000017606) #24	Olfm4 (ENSJJAG00000018241) #25	ENSJJAG00000022681	ENSJJAG00000024366	ENSJJAG00000009571	ENSJJAG00000021490	Pcdh17 (ENSJJAG00000015973) #29	ENSJJAG00000017379	ENSJJAG00000023292	ENSJJAG00000016423	Diaph3 (ENSJJAG00000000502) #31	Tdrd3 (ENSJJAG00000023665) #34	ENSJJAG00000015296 #36	ENSJJAG00000000679
Kangaroo rat	MODERN SPECIES	320	Lacc1 (ENSDORG00000015240)	Ccdc122 (ENSDORG00000015236)	Enox1 (ENSDORG00000001328)	Dnajc15 (ENSDORG00000013550)	Epsti1 (ENSDORG00000004992)	Fam216b (ENSDORG00000007655)	Tnfsf11 (ENSDORG00000026136)	Dgkh (ENSDORG00000005024)	Vwa8 (ENSDORG00000011298)	Rgcc (ENSDORG00000015195)	Naa16 (ENSDORG00000012584)	Mtrf1 (ENSDORG00000016429)	Kbtbd7 (ENSDORG00000023750)	Wbp4 (ENSDORG00000007755)	Elf1 (ENSDORG00000026436)	Sugt1 (ENSDORG00000013064) #22	Cnmd (ENSDORG00000013065) #23	Pcdh8 (ENSDORG00000009041) #24	Olfm4 (ENSDORG00000012987) #25	ENSDORG00000013874	Pcdh17 (ENSDORG00000025566) #29	Diaph3 (ENSDORG00000000055) #31	Tdrd3 (ENSDORG00000008714) #34	ENSDORG00000001884 #36	ENSDORG00000027613	Pcdh9 (ENSDORG00000000735)	Klhl1 (ENSDORG00000014310)	Mzt1 (ENSDORG00000007292)	Dis3 (ENSDORG00000007295)	Pibf1 (ENSDORG00000007297)	Klf5 (ENSDORG00000005117)
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT00940000154415.`b.f	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Marmotini	ANCESTRAL SPECIES	29	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000155157.l	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25
Alpin marmot	MODERN SPECIES	13	ENOX1 (ENSMMMG00000023468)	EPSTI1 (ENSMMMG00000023471)	ENSMMMG00000023473	TNFSF11 (ENSMMMG00000023474)	AKAP11 (ENSMMMG00000023475)	DGKH (ENSMMMG00000023481)	VWA8 (ENSMMMG00000023535)	RGCC (ENSMMMG00000023619)	NAA16 (ENSMMMG00000000060)	MTRF1 (ENSMMMG00000000091)	KBTBD7 (ENSMMMG00000000126)	WBP4 (ENSMMMG00000000179)	ENSMMMG00000000196	ELF1 (ENSMMMG00000000224)	ENSMMMG00000000315	SUGT1 (ENSMMMG00000000341) #22	CNMD (ENSMMMG00000000405) #23	PCDH8 (ENSMMMG00000000439) #24	OLFM4 (ENSMMMG00000000484) #25
Marmotini_b	ANCESTRAL SPECIES	240									ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000155157.l	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25
Arctic ground squirrel	MODERN SPECIES	216									RGCC (ENSUPAG00010022251)	NAA16 (ENSUPAG00010022237)	MTRF1 (ENSUPAG00010022231)	KBTBD7 (ENSUPAG00010022229)	WBP4 (ENSUPAG00010022226)	ENSUPAG00010022225	ELF1 (ENSUPAG00010022223)	SUGT1 (ENSUPAG00010022218) #22	CNMD (ENSUPAG00010022215) #23	PCDH8 (ENSUPAG00010022211) #24	OLFM4 (ENSUPAG00010022208) #25
Squirrel	MODERN SPECIES	267									RGCC (ENSSTOG00000025358)	NAA16 (ENSSTOG00000002798)	MTRF1 (ENSSTOG00000021682)	KBTBD7 (ENSSTOG00000029195)	WBP4 (ENSSTOG00000024976)	ENSSTOG00000006234	ELF1 (ENSSTOG00000007700)	SUGT1 (ENSSTOG00000004159) #22	CNMD (ENSSTOG00000004192) #23	PCDH8 (ENSSTOG00000022966) #24	OLFM4 (ENSSTOG00000019753) #25
Eurasian red squirrel	MODERN SPECIES	13	DNAJC15 (ENSSVLG00005000749)	EPSTI1 (ENSSVLG00005000671)	FAM216B (ENSSVLG00005000610)	ENSSVLG00005000585	TNFSF11 (ENSSVLG00005000540)	AKAP11 (ENSSVLG00005000468)	DGKH (ENSSVLG00005000391)	VWA8 (ENSSVLG00005004690)	RGCC (ENSSVLG00005004637)	NAA16 (ENSSVLG00005004585)	ENSSVLG00005004565	ENSSVLG00005004557	WBP4 (ENSSVLG00005004520)	ELF1 (ENSSVLG00005004493)	ENSSVLG00005004459	SUGT1 (ENSSVLG00005004421) #22	CNMD (ENSSVLG00005004380) #23	PCDH8 (ENSSVLG00005004344) #24	OLFM4 (ENSSVLG00005004306) #25	ENSSVLG00005004273	ENSSVLG00005004248	PCDH17 (ENSSVLG00005004228) #29	ENSSVLG00005004213 #30	ENSSVLG00005004190	DIAPH3 (ENSSVLG00005003826) #31	ENSSVLG00005003547	PCDH20 (ENSSVLG00005003533) #36	ENSSVLG00005003513	ENSSVLG00005003479	ENSSVLG00005003449	ENSSVLG00005003425
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954.k.a	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	2	ENSHGLG00000046376	ENSHGLG00000007054	DGKH (ENSHGLG00000018938)	VWA8 (ENSHGLG00000007298)	RGCC (ENSHGLG00000006185)	ENSHGLG00000035169	NAA16 (ENSHGLG00000008702)	ENSHGLG00000039892	ENSHGLG00000040621	ENSHGLG00000003000	MTRF1 (ENSHGLG00000003210)	KBTBD7 (ENSHGLG00000020078)	WBP4 (ENSHGLG00000004585)	ENSHGLG00000045934	ENSHGLG00000005329	ENSHGLG00000008247 #22	ENSHGLG00000034939 #23	PCDH8 (ENSHGLG00000003306) #24	ENSHGLG00000003692 #25	ENSHGLG00000036656	ENSHGLG00000047426	ENSHGLG00000042301	ENSHGLG00000034074	ENSHGLG00000033401	PCDH17 (ENSHGLG00000006849) #29	ENSHGLG00000051018 #30	ENSHGLG00000045977	ENSHGLG00000032376	ENSHGLG00000045778	ENSHGLG00000018541 #31	ENSHGLG00000018707 #34
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000020521	ENSHGLG00000010125	SMIM31 (ENSHGLG00000004408)	ENSHGLG00000049940	ENSHGLG00000041181	ENSHGLG00000040885	MARCHF1 (ENSHGLG00000008819)	TMA16 (ENSHGLG00000014898)	NPY5R (ENSHGLG00000017420)	NPY1R (ENSHGLG00000039833)	ENSHGLG00000015330	ENSHGLG00000014899	ENSHGLG00000015180	ENSHGLG00000044170	ENSHGLG00000041096	ENSHGLG00000044555 #22	ENSHGLG00000039432	ENSHGLG00000005452	ENSHGLG00000010280	SH2D4A (ENSHGLG00000017844)	CSGALNACT1 (ENSHGLG00000016296)	INTS10 (ENSHGLG00000015823)	LPL (ENSHGLG00000005162)	SLC18A1 (ENSHGLG00000007001)	ATP6V1B2 (ENSHGLG00000007965)	ENSHGLG00000048578	GFRA2 (ENSHGLG00000015954)	DOK2 (ENSHGLG00000015292)	XPO7 (ENSHGLG00000008763)	NPM2 (ENSHGLG00000006243)	FGF17 (ENSHGLG00000007312)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	2	FGF9 (ENSHGLG00000031951)	SGCG (ENSHGLG00000015643)	SACS (ENSHGLG00000014610)	TNFRSF19 (ENSHGLG00000014259)	MIPEP (ENSHGLG00000007271)	ENSHGLG00000014175	ENSHGLG00000021069	ENSHGLG00000018983	ENSHGLG00000045249	ENSHGLG00000016388	NUPL1 (ENSHGLG00000015434)	ATP8A2 (ENSHGLG00000006272)	SHISA2 (ENSHGLG00000009578)	RNF6 (ENSHGLG00000008194)	CDK8 (ENSHGLG00000007563)	ENSHGLG00000006446 #22	WASF3 (ENSHGLG00000006350)	GPR12 (ENSHGLG00000042343)	ENSHGLG00000006711	ENSHGLG00000005660	RASL11A (ENSHGLG00000005304)	ENSHGLG00000004173	MTIF3 (ENSHGLG00000003959)	LNX2 (ENSHGLG00000003410)	POLR1D (ENSHGLG00000039229)	ENSHGLG00000003202	GSX1 (ENSHGLG00000039858)	PDX1 (ENSHGLG00000010243)	CDX2 (ENSHGLG00000009166)	URAD (ENSHGLG00000008479)	FLT3 (ENSHGLG00000005717)
Naked mole-rat female	MODERN SPECIES	31	IRS4 (ENSHGLG00000002760)	ENSHGLG00000040878	ENSHGLG00000044255	ENSHGLG00000049889	ENSHGLG00000047558	ENSHGLG00000001921	ENSHGLG00000040685	KCNE5 (ENSHGLG00000043014)	ACSL4 (ENSHGLG00000001398)	TMEM164 (ENSHGLG00000038193)	AMMECR1 (ENSHGLG00000043998)	ENSHGLG00000000972	RTL9 (ENSHGLG00000005701)	ENSHGLG00000045921	ENSHGLG00000003944	ENSHGLG00000004584 #22	MED15 (ENSHGLG00000003499)	ENSHGLG00000002988	ENSHGLG00000002897	DCX (ENSHGLG00000042575)	SERTM2 (ENSHGLG00000019847)	ENSHGLG00000037201	ALG13 (ENSHGLG00000027861)	TRPC5 (ENSHGLG00000001204)	TRPC5OS (ENSHGLG00000049837)	ENSHGLG00000035558	ENSHGLG00000001034	ENSHGLG00000019946	ENSHGLG00000046647	ENSHGLG00000048878	LHFPL1 (ENSHGLG00000013759)
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000049862	ENSHGLG00000046236	RAB3C (ENSHGLG00000004380)	GAPT (ENSHGLG00000035104)	PLK2 (ENSHGLG00000004619)	ENSHGLG00000005073	ACTBL2 (ENSHGLG00000020239)	ENSHGLG00000048618	GPBP1 (ENSHGLG00000006461)	ENSHGLG00000047590	ENSHGLG00000049674	MIER3 (ENSHGLG00000007522)	SETD9 (ENSHGLG00000007843)	ENSHGLG00000016353	MAP3K1 (ENSHGLG00000008852)	ENSHGLG00000002155 #22	ENSHGLG00000037743	ENSHGLG00000019923	ANKRD55 (ENSHGLG00000002248)	ENSHGLG00000017887	IL6ST (ENSHGLG00000002605)	IL31RA (ENSHGLG00000003029)	ENSHGLG00000050818	DDX4 (ENSHGLG00000003594)	ENSHGLG00000018740	PLPP1 (ENSHGLG00000019302)	MTREX (ENSHGLG00000019445)	ENSHGLG00000001037	ENSHGLG00000042328	DHX29 (ENSHGLG00000015591)	ENSHGLG00000045901
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954.k.a	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Hystricomorpha_b	ANCESTRAL SPECIES	44	ENSGT00940000153137.a.b.b.a ##9	ENSGT00940000161772	ENSGT00730000111163	ENSGT00940000159160	ENSGT00950000183097.a.a.b	ENSGT00710000106860	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954.k.a	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	62	TFAP4 (ENSODEG00000013612)	ENSODEG00000020049	SRL (ENSODEG00000013256)	ENSODEG00000013052	ADCY9 (ENSODEG00000012921)	ENSODEG00000013593	CREBBP (ENSODEG00000014109)	ENSODEG00000013116	ENSODEG00000012684	SLX4 (ENSODEG00000012733)	NLRC3 (ENSODEG00000014984)	ENSODEG00000013693	ENSODEG00000014431	NAA60 (ENSODEG00000013383)	ZNF597 (ENSODEG00000013400)	ENSODEG00000013800 #22	ZNF174 (ENSODEG00000013564)	OR2C1 (ENSODEG00000020115)	ENSODEG00000013599	ENSODEG00000012647	ZNF200 (ENSODEG00000013640)	ENSODEG00000014709	ENSODEG00000020280	ENSODEG00000020185	ENSODEG00000012823	ZNF213 (ENSODEG00000013700)	ZNF205 (ENSODEG00000013119)	ZSCAN10 (ENSODEG00000012724)	MMP25 (ENSODEG00000013690)	BICDL2 (ENSODEG00000013056)	THOC6 (ENSODEG00000012771)
Degu	MODERN SPECIES	163	AKAP11 (ENSODEG00000006558)	DGKH (ENSODEG00000006365)	ENSODEG00000006776	ENSODEG00000019318	ENSODEG00000019364	ENSODEG00000005696	VWA8 (ENSODEG00000006290)	RGCC (ENSODEG00000005723)	ENSODEG00000006513	MTRF1 (ENSODEG00000005782)	KBTBD7 (ENSODEG00000019293)	ENSODEG00000004948	WBP4 (ENSODEG00000005811)	ENSODEG00000005378	ELF1 (ENSODEG00000005272)	ENSODEG00000005242 #22	ENSODEG00000005825
Degu	MODERN SPECIES	359																ENSODEG00000000443 #22	TMEM47 (ENSODEG00000000453)	ENSODEG00000000464	ENSODEG00000000468
Long-tailed chinchilla	MODERN SPECIES	111														WBP4 (ENSCLAG00000002494)	ELF1 (ENSCLAG00000002453)	SUGT1 (ENSCLAG00000002389) #22	CNMD (ENSCLAG00000008378) #23	PCDH8 (ENSCLAG00000007947) #24	OLFM4 (ENSCLAG00000007743) #25	ENSCLAG00000007530	ENSCLAG00000017686	PCDH17 (ENSCLAG00000007232) #29	DIAPH3 (ENSCLAG00000003120) #31	TDRD3 (ENSCLAG00000002654) #34	PCDH20 (ENSCLAG00000002449) #36	PCDH9 (ENSCLAG00000002374)	KLHL1 (ENSCLAG00000002153)	DACH1 (ENSCLAG00000002015)	MZT1 (ENSCLAG00000001929)	BORA (ENSCLAG00000003532)	DIS3 (ENSCLAG00000003424)
Guinea pig	MODERN SPECIES	6	ENSCPOG00000031530	LACC1 (ENSCPOG00000011253)	CCDC122 (ENSCPOG00000003514)	ENOX1 (ENSCPOG00000020461)	DNAJC15 (ENSCPOG00000003485)	ENSCPOG00000040476	TNFSF11 (ENSCPOG00000031600)	AKAP11 (ENSCPOG00000006094)	DGKH (ENSCPOG00000006087)	VWA8 (ENSCPOG00000006076)	RGCC (ENSCPOG00000035101)	MTRF1 (ENSCPOG00000005264)	KBTBD7 (ENSCPOG00000008898)	WBP4 (ENSCPOG00000013860)	ELF1 (ENSCPOG00000004342)	SUGT1 (ENSCPOG00000003374) #22	CNMD (ENSCPOG00000038512) #23	PCDH8 (ENSCPOG00000014873) #24	OLFM4 (ENSCPOG00000032792) #25	ENSCPOG00000032565 #29	DIAPH3 (ENSCPOG00000007425) #31	TDRD3 (ENSCPOG00000010437) #34	PCDH20 (ENSCPOG00000010664) #36	FAM124A (ENSCPOG00000032191)	SERPINE3 (ENSCPOG00000026248)	INTS6 (ENSCPOG00000000077)	WDFY2 (ENSCPOG00000003222)	ATP7B (ENSCPOG00000001644) #11	ALG11 (ENSCPOG00000021015) #13	NEK3 (ENSCPOG00000005021) #15	CKAP2 (ENSCPOG00000012382) #19
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Eulipotyphla	ANCESTRAL SPECIES	1182																ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23
Common shrew	MODERN SPECIES	4631																SUGT1 (ENSSARG00000011239) #22	CNMD (ENSSARG00000011249) #23
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143309	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Suina	ANCESTRAL SPECIES	29	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767.d #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293	ENSGT00940000156711
Pig	MODERN SPECIES	2	TNFSF11 (ENSSSCG00000052062)	AKAP11 (ENSSSCG00000009430)	DGKH (ENSSSCG00000009431)	VWA8 (ENSSSCG00000029837)	ENSSSCG00000057192	RGCC (ENSSSCG00000009434)	ENSSSCG00000009435	ENSSSCG00000060529	ENSSSCG00000034029	MTRF1 (ENSSSCG00000009436)	KBTBD6 (ENSSSCG00000031378)	KBTBD7 (ENSSSCG00000037413)	WBP4 (ENSSSCG00000031627)	ELF1 (ENSSSCG00000009440)	ENSSSCG00000047512	SUGT1 (ENSSSCG00000039338) #22	CNMD (ENSSSCG00000009442) #23	PCDH8 (ENSSSCG00000009445) #24	OLFM4 (ENSSSCG00000009444) #25	ENSSSCG00000035135	PCDH17 (ENSSSCG00000009446) #29	DIAPH3 (ENSSSCG00000009448) #31	TDRD3 (ENSSSCG00000009449) #34	PCDH20 (ENSSSCG00000031955) #36	PCDH9 (ENSSSCG00000038842)	ENSSSCG00000059524	ENSSSCG00000043805	ENSSSCG00000044557	ENSSSCG00000051740	KLHL1 (ENSSSCG00000009456)	ENSSSCG00000053888
Chacoan peccary	MODERN SPECIES	216	ENOX1 (ENSCWAG00000001073)	DNAJC15 (ENSCWAG00000001051)	EPSTI1 (ENSCWAG00000000924)	FAM216B (ENSCWAG00000000885)	TNFSF11 (ENSCWAG00000000851)	AKAP11 (ENSCWAG00000000801)	DGKH (ENSCWAG00000000630)	VWA8 (ENSCWAG00000000455)	RGCC (ENSCWAG00000000406)	NAA16 (ENSCWAG00000000371)	MTRF1 (ENSCWAG00000000321)	KBTBD7 (ENSCWAG00000000301)	KBTBD6 (ENSCWAG00000000273)	WBP4 (ENSCWAG00000000246)	ELF1 (ENSCWAG00000000184)	SUGT1 (ENSCWAG00000000140) #22	CNMD (ENSCWAG00000000097) #23	PCDH8 (ENSCWAG00000000054) #24	ENSCWAG00000019571	OLFM4 (ENSCWAG00000019527) #25	ENSCWAG00000019495	ENSCWAG00000019477	ENSCWAG00000019461	PCDH17 (ENSCWAG00000019432) #29	ENSCWAG00000019419 #30	ENSCWAG00000019391	DIAPH3 (ENSCWAG00000017632) #31	ENSCWAG00000017495	TDRD3 (ENSCWAG00000017371) #34	PCDH20 (ENSCWAG00000017337) #36	DNAI3 (ENSCWAG00000017052)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143309	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Cetacea	ANCESTRAL SPECIES	20	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT01030000238532	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954.u	ENSGT00390000013790	ENSGT00530000063106.C
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00390000011725.d.d	ENSGT00390000001374.a	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT01030000238532	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954.u
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00390000011725.d.d	ENSGT00390000001374.a	ENSGT00940000157767 #31	ENSGT00940000155487 #34
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00390000011725.d.d	ENSGT00390000001374.a	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00900000141068.e.a	ENSGT00940000156743 #36	ENSGT00940000162770.d.b.b	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00390000001134.a.a
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00390000012818.o.a.a.a.a.d	ENSGT00940000156743 #36	ENSGT00940000162770.d.b.b	ENSGT00940000160425	ENSGT00940000155079.b	ENSGT00390000001134.a.a	ENSGT00390000005954.u	ENSGT00390000013790
Narwhal	MODERN SPECIES	315	ENSMMNG00015014636	EPSTI1 (ENSMMNG00015014629)	FAM216B (ENSMMNG00015014608)	TNFSF11 (ENSMMNG00015014578)	AKAP11 (ENSMMNG00015021253)	DGKH (ENSMMNG00015021180)	VWA8 (ENSMMNG00015021128)	RGCC (ENSMMNG00015021108)	NAA16 (ENSMMNG00015021061)	MTRF1 (ENSMMNG00015021028)	KBTBD7 (ENSMMNG00015021016)	ENSMMNG00015021006	WBP4 (ENSMMNG00015020981)	ELF1 (ENSMMNG00015020957)	ENSMMNG00015020940	SUGT1 (ENSMMNG00015020917) #22	CNMD (ENSMMNG00015020893) #23	PCDH8 (ENSMMNG00015020876) #24	OLFM4 (ENSMMNG00015020840) #25	ENSMMNG00015020809	ENSMMNG00015020794	PCDH17 (ENSMMNG00015020740) #29	ENSMMNG00015020730	DIAPH3 (ENSMMNG00015020329) #31	TDRD3 (ENSMMNG00015020168) #34	ENSMMNG00015020134	ENSMMNG00015020120	PCDH20 (ENSMMNG00015020105) #36	KLHL1 (ENSMMNG00015020052)	ENSMMNG00015019990	ENSMMNG00015019971
Beluga whale	MODERN SPECIES	29	ENOX1 (ENSDLEG00000007152)	ENSDLEG00000007189	DNAJC15 (ENSDLEG00000007194)	EPSTI1 (ENSDLEG00000007205)	FAM216B (ENSDLEG00000007217)	TNFSF11 (ENSDLEG00000007228)	AKAP11 (ENSDLEG00000007242)	DGKH (ENSDLEG00000007260)	VWA8 (ENSDLEG00000007291)	RGCC (ENSDLEG00000007344)	NAA16 (ENSDLEG00000007348)	KBTBD7 (ENSDLEG00000007360)	KBTBD6 (ENSDLEG00000007365)	WBP4 (ENSDLEG00000007369)	ELF1 (ENSDLEG00000007377)	SUGT1 (ENSDLEG00000007385) #22	CNMD (ENSDLEG00000007399) #23	PCDH8 (ENSDLEG00000007409) #24	OLFM4 (ENSDLEG00000007414) #25	PCDH17 (ENSDLEG00000007450) #29	ENSDLEG00000007455	DIAPH3 (ENSDLEG00000007477) #31	TDRD3 (ENSDLEG00000007511) #34	ENSDLEG00000007520	ENSDLEG00000007533	PCDH20 (ENSDLEG00000007543) #36	ENSDLEG00000007550	ENSDLEG00000007555
Vaquita	MODERN SPECIES	9	ENOX1 (ENSPSNG00000014858)	DNAJC15 (ENSPSNG00000014922)	EPSTI1 (ENSPSNG00000014964)	FAM216B (ENSPSNG00000015047)	TNFSF11 (ENSPSNG00000015104)	AKAP11 (ENSPSNG00000015306)	DGKH (ENSPSNG00000015456)	VWA8 (ENSPSNG00000016031)	RGCC (ENSPSNG00000017723)	NAA16 (ENSPSNG00000017764)	MTRF1 (ENSPSNG00000017841)	KBTBD7 (ENSPSNG00000017892)	KBTBD6 (ENSPSNG00000017912)	WBP4 (ENSPSNG00000017925)	ELF1 (ENSPSNG00000017963)	SUGT1 (ENSPSNG00000018012) #22	CNMD (ENSPSNG00000018053) #23	PCDH8 (ENSPSNG00000018182) #24	OLFM4 (ENSPSNG00000018251) #25	ENSPSNG00000018416	ENSPSNG00000018462	PCDH17 (ENSPSNG00000018511) #29	ENSPSNG00000018599	ENSPSNG00000018611	DIAPH3 (ENSPSNG00000018689) #31	TDRD3 (ENSPSNG00000018838) #34	ENSPSNG00000018901	ENSPSNG00000018936	PCDH20 (ENSPSNG00000018984) #36	ENSPSNG00000019011	ENSPSNG00000019031
Sperm whale	MODERN SPECIES	4	EPSTI1 (ENSPCTG00005004170)	FAM216B (ENSPCTG00005004201)	ENSPCTG00005004218	TNFSF11 (ENSPCTG00005004229)	AKAP11 (ENSPCTG00005004282)	DGKH (ENSPCTG00005004470)	VWA8 (ENSPCTG00005005091)	RGCC (ENSPCTG00005005316)	NAA16 (ENSPCTG00005005364)	MTRF1 (ENSPCTG00005005513)	KBTBD7 (ENSPCTG00005005568)	ENSPCTG00005005579	KBTBD6 (ENSPCTG00005005604)	WBP4 (ENSPCTG00005005625)	ELF1 (ENSPCTG00005005674)	SUGT1 (ENSPCTG00005005757) #22	CNMD (ENSPCTG00005005865) #23	PCDH8 (ENSPCTG00005005899) #24	OLFM4 (ENSPCTG00005005928) #25	ENSPCTG00005005971	ENSPCTG00005005982	ENSPCTG00005006037	PCDH17 (ENSPCTG00005006063) #29	ENSPCTG00005006098	ENSPCTG00005006107	ENSPCTG00005006120	DIAPH3 (ENSPCTG00005006190) #31	ENSPCTG00005006500	TDRD3 (ENSPCTG00005006554) #34	ENSPCTG00005006621	ENSPCTG00005006637
Blue whale	MODERN SPECIES	9	ENSBMSG00010017150	EPSTI1 (ENSBMSG00010017177)	FAM216B (ENSBMSG00010017267)	TNFSF11 (ENSBMSG00010017289)	AKAP11 (ENSBMSG00010017386)	DGKH (ENSBMSG00010017429)	VWA8 (ENSBMSG00010017626)	RGCC (ENSBMSG00010017667)	NAA16 (ENSBMSG00010017707)	MTRF1 (ENSBMSG00010017736)	KBTBD7 (ENSBMSG00010017778)	KBTBD6 (ENSBMSG00010017797)	WBP4 (ENSBMSG00010017811)	ELF1 (ENSBMSG00010017832)	ENSBMSG00010017864	SUGT1 (ENSBMSG00010017890) #22	CNMD (ENSBMSG00010017907) #23	PCDH8 (ENSBMSG00010017967) #24	OLFM4 (ENSBMSG00010018005) #25	ENSBMSG00010018076	ENSBMSG00010018097	PCDH17 (ENSBMSG00010018148) #29	ENSBMSG00010018211	ENSBMSG00010018224	DIAPH3 (ENSBMSG00010014297) #31	ENSBMSG00010015915	ENSBMSG00010015925	TDRD3 (ENSBMSG00010015943) #34	ENSBMSG00010015989	ENSBMSG00010015996	ENSBMSG00010016013
Pecora	ANCESTRAL SPECIES	23	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Yarkand deer	MODERN SPECIES	23	FAM216B (ENSCHYG00000020887)	TNFSF11 (ENSCHYG00000020756)	AKAP11 (ENSCHYG00000020568)	ENSCHYG00000020537	DGKH (ENSCHYG00000019526)	VWA8 (ENSCHYG00000018691)	ENSCHYG00000018641	ENSCHYG00000018580	ENSCHYG00000018532	NAA16 (ENSCHYG00000017247)	MTRF1 (ENSCHYG00000017123)	KBTBD7 (ENSCHYG00000017098)	KBTBD6 (ENSCHYG00000017049)	ENSCHYG00000016947	ELF1 (ENSCHYG00000016851)	SUGT1 (ENSCHYG00000016730) #22	CNMD (ENSCHYG00000016613) #23	PCDH8 (ENSCHYG00000016544) #24	ENSCHYG00000016497	OLFM4 (ENSCHYG00000016456) #25	ENSCHYG00000016396	ENSCHYG00000016341	ENSCHYG00000016296	ENSCHYG00000016273	PCDH17 (ENSCHYG00000016204) #29	ENSCHYG00000016183 #30	ENSCHYG00000016169	ENSCHYG00000016082	ENSCHYG00000015929	DIAPH3 (ENSCHYG00000015421) #31	ENSCHYG00000015322
Percora_a	ANCESTRAL SPECIES	25	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Bovidae	ANCESTRAL SPECIES	25	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT01030000240190	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00390000012420.f	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT01030000240190	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00390000012420.f	ENSGT00960000190184	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Bos	ANCESTRAL SPECIES	22	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601.i	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00390000012420.f	ENSGT00960000190184	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Bos_b	ANCESTRAL SPECIES	4	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000164406	ENSGT00390000006601.i	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00390000013931.a.a.b	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00390000012420.f	ENSGT00940000164795	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Hybrid Bos Indicus	MODERN SPECIES	3	EPSTI1 (ENSBIXG00005003975)	FAM216B (ENSBIXG00005023313)	TNFSF11 (ENSBIXG00005004003)	AKAP11 (ENSBIXG00005023417)	DGKH (ENSBIXG00005023801)	ENSBIXG00005006905	VWA8 (ENSBIXG00005023867)	ENSBIXG00005006058	ENSBIXG00005023942	NAA16 (ENSBIXG00005024029)	MTRF1 (ENSBIXG00005024075)	KBTBD7 (ENSBIXG00005024104)	KBTBD6 (ENSBIXG00005006842)	WBP4 (ENSBIXG00005006910)	ELF1 (ENSBIXG00005006286)	SUGT1 (ENSBIXG00005007180) #22	CNMD (ENSBIXG00005024281) #23	PCDH8 (ENSBIXG00005024326) #24	OLFM4 (ENSBIXG00005024360) #25	ENSBIXG00005024414	ENSBIXG00005004173	ENSBIXG00005024454	PCDH17 (ENSBIXG00005024501) #29	ENSBIXG00005024539	DIAPH3 (ENSBIXG00005024684) #31	ENSBIXG00005024758	ENSBIXG00005024782	ENSBIXG00005024798	TDRD3 (ENSBIXG00005025165) #34	ENSBIXG00005004291	ENSBIXG00005025279
Cow	MODERN SPECIES	3	EPSTI1 (ENSBTAG00000019054)	FAM216B (ENSBTAG00000003595)	TNFSF11 (ENSBTAG00000008924)	AKAP11 (ENSBTAG00000014752)	DGKH (ENSBTAG00000013879)	ENSBTAG00000053271	VWA8 (ENSBTAG00000001133)	RGCC (ENSBTAG00000034885)	ENSBTAG00000052870	NAA16 (ENSBTAG00000038251)	KBTBD7 (ENSBTAG00000039823)	KBTBD6 (ENSBTAG00000008656)	WBP4 (ENSBTAG00000016637)	MTRF1 (ENSBTAG00000012260)	ELF1 (ENSBTAG00000007356)	SUGT1 (ENSBTAG00000002137) #22	CNMD (ENSBTAG00000025502) #23	PCDH8 (ENSBTAG00000018179) #24	OLFM4 (ENSBTAG00000022779) #25	ENSBTAG00000025953	ENSBTAG00000053445	PCDH17 (ENSBTAG00000010420) #29	ENSBTAG00000051281 #30	ENSBTAG00000053708	ENSBTAG00000051623	DIAPH3 (ENSBTAG00000012443) #31	TDRD3 (ENSBTAG00000009308) #34	ENSBTAG00000054721	ENSBTAG00000035926	ENSBTAG00000053256	PCDH20 (ENSBTAG00000011862) #36
Bos_a	ANCESTRAL SPECIES	55	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601.i	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00550000076230	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Domestic yak	MODERN SPECIES	6	DNAJC15 (ENSBGRG00000004544)	EPSTI1 (ENSBGRG00000004611)	FAM216B (ENSBGRG00000004982)	TNFSF11 (ENSBGRG00000005035)	AKAP11 (ENSBGRG00000005093)	DGKH (ENSBGRG00000005383)	ENSBGRG00000005473	VWA8 (ENSBGRG00000005506)	RGCC (ENSBGRG00000005828)	NAA16 (ENSBGRG00000005856)	MTRF1 (ENSBGRG00000006009)	KBTBD7 (ENSBGRG00000006036)	KBTBD6 (ENSBGRG00000006050)	WBP4 (ENSBGRG00000006089)	ELF1 (ENSBGRG00000006174)	SUGT1 (ENSBGRG00000006244) #22	CNMD (ENSBGRG00000006282) #23	PCDH8 (ENSBGRG00000006338) #24	OLFM4 (ENSBGRG00000006393) #25	ENSBGRG00000006404	ENSBGRG00000006431	ENSBGRG00000006447	PCDH17 (ENSBGRG00000006468) #29	ENSBGRG00000006501 #30	ENSBGRG00000006511	ENSBGRG00000006529	DIAPH3 (ENSBGRG00000006554) #31	TDRD3 (ENSBGRG00000006592) #34	ENSBGRG00000006743	ENSBGRG00000006750	ENSBGRG00000006762
Wild yak	MODERN SPECIES	1571															ELF1 (ENSBMUG00000010848)	SUGT1 (ENSBMUG00000010789) #22	CNMD (ENSBMUG00000010742) #23	PCDH8 (ENSBMUG00000010707) #24	OLFM4 (ENSBMUG00000010686) #25
American bison	MODERN SPECIES	3149								ENSBBBG00000003721	NAA16 (ENSBBBG00000000798)	MTRF1 (ENSBBBG00000008587)	KBTBD7 (ENSBBBG00000015058)	KBTBD6 (ENSBBBG00000002790)	WBP4 (ENSBBBG00000015111)	ENSBBBG00000008913	ELF1 (ENSBBBG00000015139)	SUGT1 (ENSBBBG00000002778) #22	CNMD (ENSBBBG00000003528) #23	PCDH8 (ENSBBBG00000015190) #24	OLFM4 (ENSBBBG00000015204) #25	ENSBBBG00000015212
Caprinae	ANCESTRAL SPECIES	37	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT01030000240190	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00390000012420.f	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36
Rambouillet Sheep	MODERN SPECIES	1	ENSOARG00020006129	EPSTI1 (ENSOARG00020006110)	FAM216B (ENSOARG00020006081)	TNFSF11 (ENSOARG00020006031)	AKAP11 (ENSOARG00020006005)	DGKH (ENSOARG00020005790)	VWA8 (ENSOARG00020005673)	RGCC (ENSOARG00020005649)	NAA16 (ENSOARG00020005343)	MTRF1 (ENSOARG00020005295)	KBTBD7 (ENSOARG00020005282)	KBTBD6 (ENSOARG00020005273)	WBP4 (ENSOARG00020005228)	ENSOARG00020005207	ELF1 (ENSOARG00020005153)	SUGT1 (ENSOARG00020005060) #22	CNMD (ENSOARG00020005002) #23	PCDH8 (ENSOARG00020004982) #24	OLFM4 (ENSOARG00020004943) #25	ENSOARG00020004908	VDAC1 (ENSOARG00020004891)	PCDH17 (ENSOARG00020004877) #29	ENSOARG00020004868 #30	ENSOARG00020004852	ENSOARG00020004846	ENSOARG00020004829	DIAPH3 (ENSOARG00020003805) #31	TDRD3 (ENSOARG00020003168) #34	ENSOARG00020003059	PCDH20 (ENSOARG00020013301) #36	MANEA (ENSOARG00020013232)
Goat	MODERN SPECIES	3	ENSCHIG00000017754	DNAJC15 (ENSCHIG00000024974)	EPSTI1 (ENSCHIG00000023487)	FAM216B (ENSCHIG00000024226)	TNFSF11 (ENSCHIG00000015014)	AKAP11 (ENSCHIG00000013636)	DGKH (ENSCHIG00000006200)	VWA8 (ENSCHIG00000014923)	RGCC (ENSCHIG00000021125)	NAA16 (ENSCHIG00000020957)	MTRF1 (ENSCHIG00000011810)	KBTBD7 (ENSCHIG00000008970)	KBTBD6 (ENSCHIG00000008480)	WBP4 (ENSCHIG00000013146)	ELF1 (ENSCHIG00000022154)	SUGT1 (ENSCHIG00000016538) #22	CNMD (ENSCHIG00000011842) #23	ENSCHIG00000018869	PCDH8 (ENSCHIG00000007364) #24	OLFM4 (ENSCHIG00000012620) #25	ENSCHIG00000017455	ENSCHIG00000020046	ENSCHIG00000007273	PCDH17 (ENSCHIG00000011906) #29	ENSCHIG00000018989 #30	ENSCHIG00000021621	DIAPH3 (ENSCHIG00000020803) #31	ENSCHIG00000020620	ENSCHIG00000004079	TDRD3 (ENSCHIG00000020019) #34	ENSCHIG00000021721
Siberian musk deer	MODERN SPECIES	17		AKAP11 (ENSMMSG00000020343)	ENSMMSG00000020326	DGKH (ENSMMSG00000020161)	VWA8 (ENSMMSG00000019834)	RGCC (ENSMMSG00000019778)	ENSMMSG00000019760	ENSMMSG00000019739	ENSMMSG00000019729	KBTBD7 (ENSMMSG00000019725)	ENSMMSG00000019685	ENSMMSG00000019629	ENSMMSG00000019606	ENSMMSG00000019595	ELF1 (ENSMMSG00000019566)	SUGT1 (ENSMMSG00000019517) #22	CNMD (ENSMMSG00000019460) #23	PCDH8 (ENSMMSG00000019403) #24	OLFM4 (ENSMMSG00000019358) #25	ENSMMSG00000019340	ENSMMSG00000019306
Camelidae	ANCESTRAL SPECIES	14	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00940000166099	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143309	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00910000148597	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Arabian camel	MODERN SPECIES	5	DNAJC15 (ENSCDRG00005009304)	EPSTI1 (ENSCDRG00005009378)	FAM216B (ENSCDRG00005009565)	TNFSF11 (ENSCDRG00005009599)	AKAP11 (ENSCDRG00005009691)	DGKH (ENSCDRG00005009915)	VWA8 (ENSCDRG00005010578)	RGCC (ENSCDRG00005010786)	NAA16 (ENSCDRG00005010901)	MTRF1 (ENSCDRG00005011325)	KBTBD7 (ENSCDRG00005011400)	KBTBD6 (ENSCDRG00005011423)	WBP4 (ENSCDRG00005011462)	ELF1 (ENSCDRG00005011557)	ENSCDRG00005011625	SUGT1 (ENSCDRG00005011660) #22	CNMD (ENSCDRG00005011783) #23	PCDH8 (ENSCDRG00005011868) #24	OLFM4 (ENSCDRG00005011913) #25	ENSCDRG00005012013	ENSCDRG00005012059	PCDH17 (ENSCDRG00005012113) #29	DIAPH3 (ENSCDRG00005012389) #31	TDRD3 (ENSCDRG00005017152) #34	ENSCDRG00005017199	PCDH20 (ENSCDRG00005017212) #36	ENSCDRG00005017248	ENSCDRG00005017273	PCDH9 (ENSCDRG00005017306)	ENSCDRG00005017398	KLHL1 (ENSCDRG00005003387)
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Chiroptera	ANCESTRAL SPECIES	39	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Microchiroptera	ANCESTRAL SPECIES	40	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143708	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00390000015293
Greater horseshoe bat	MODERN SPECIES	22	DNAJC15 (ENSRFEG00010016645)	EPSTI1 (ENSRFEG00010016685)	FAM216B (ENSRFEG00010016757)	TNFSF11 (ENSRFEG00010016778)	AKAP11 (ENSRFEG00010016903)	DGKH (ENSRFEG00010016960)	VWA8 (ENSRFEG00010017755)	RGCC (ENSRFEG00010018401)	NAA16 (ENSRFEG00010018490)	MTRF1 (ENSRFEG00010018838)	KBTBD7 (ENSRFEG00010018870)	ENSRFEG00010018883	KBTBD6 (ENSRFEG00010018916)	WBP4 (ENSRFEG00010018932)	ELF1 (ENSRFEG00010000181)	SUGT1 (ENSRFEG00010000205) #22	CNMD (ENSRFEG00010000232) #23	PCDH8 (ENSRFEG00010000264) #24	OLFM4 (ENSRFEG00010000281) #25	ENSRFEG00010000303	PCDH17 (ENSRFEG00010000323) #29	ENSRFEG00010000334	DIAPH3 (ENSRFEG00010000605) #31	TDRD3 (ENSRFEG00010001175) #34	PCDH20 (ENSRFEG00010001210) #36	ENSRFEG00010001244	PCDH9 (ENSRFEG00010001289)	ENSRFEG00010001336	ENSRFEG00010001352	KLHL1 (ENSRFEG00010001383)	DACH1 (ENSRFEG00010001513)
Microbat	MODERN SPECIES	944	DNAJC15 (ENSMLUG00000008684)	ENSMLUG00000015553	FAM216B (ENSMLUG00000012282)	TNFSF11 (ENSMLUG00000008819)	AKAP11 (ENSMLUG00000026426)	DGKH (ENSMLUG00000016820)	VWA8 (ENSMLUG00000015361)	RGCC (ENSMLUG00000000695)	ENSMLUG00000009482	NAA16 (ENSMLUG00000004194)	MTRF1 (ENSMLUG00000017237)	KBTBD7 (ENSMLUG00000029916)	KBTBD6 (ENSMLUG00000017068)	WBP4 (ENSMLUG00000001855)	ELF1 (ENSMLUG00000001854)	SUGT1 (ENSMLUG00000017229) #22	CNMD (ENSMLUG00000017234) #23	PCDH8 (ENSMLUG00000005370) #24	OLFM4 (ENSMLUG00000013957) #25
Equus	ANCESTRAL SPECIES	26	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00950000186331	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000160882.e	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954.y	ENSGT00390000013790	ENSGT00530000063106.C
Donkey	MODERN SPECIES	2	ENSEASG00005033429	EPSTI1 (ENSEASG00005017003)	FAM216B (ENSEASG00005016998)	TNFSF11 (ENSEASG00005025411)	AKAP11 (ENSEASG00005016987)	DGKH (ENSEASG00005016872)	VWA8 (ENSEASG00005016214)	RGCC (ENSEASG00005035316)	ENSEASG00005035563	ENSEASG00005015756	MTRF1 (ENSEASG00005015715)	KBTBD7 (ENSEASG00005015712)	KBTBD6 (ENSEASG00005036527)	ENSEASG00005015706	ENSEASG00005015703	ENSEASG00005015702 #22	CNMD (ENSEASG00005015700) #23	PCDH8 (ENSEASG00005015694) #24	OLFM4 (ENSEASG00005034164) #25	ENSEASG00005037270	PCDH17 (ENSEASG00005015677) #29	DIAPH3 (ENSEASG00005015584) #31	TDRD3 (ENSEASG00005015575) #34	PCDH20 (ENSEASG00005028627) #36	ENSEASG00005015571	ENSEASG00005015569	PCDH9 (ENSEASG00005015567)	ENSEASG00005015563	KLHL1 (ENSEASG00005015558)	DACH1 (ENSEASG00005015552)	ENSEASG00005030213
Horse	MODERN SPECIES	8	TNFSF11 (ENSECAG00000016559)	AKAP11 (ENSECAG00000021005)	DGKH (ENSECAG00000000237)	VWA8 (ENSECAG00000006748)	ENSECAG00000045148	ENSECAG00000050128	RGCC (ENSECAG00000013151)	NAA16 (ENSECAG00000015497)	MTRF1 (ENSECAG00000014389)	KBTBD7 (ENSECAG00000001308)	ENSECAG00000045437	KBTBD6 (ENSECAG00000001410)	WBP4 (ENSECAG00000021033)	ELF1 (ENSECAG00000024604)	CNMD (ENSECAG00000019524) #23	SUGT1 (ENSECAG00000012999) #22	ENSECAG00000034043	PCDH8 (ENSECAG00000024090) #24	OLFM4 (ENSECAG00000010860) #25	ENSECAG00000028608	ENSECAG00000014035	ENSECAG00000053922	ENSECAG00000036793	PCDH17 (ENSECAG00000017321) #29	ENSECAG00000038550	DIAPH3 (ENSECAG00000019161) #31	TDRD3 (ENSECAG00000000550) #34	ENSECAG00000004787	PCDH20 (ENSECAG00000013179) #36	ENSECAG00000038600	ENSECAG00000014029
Carnivora	ANCESTRAL SPECIES	23	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00950000185146	ENSGT00900000143309	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Felidae	ANCESTRAL SPECIES	23	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000157455.b.b.a	ENSGT00390000009819.a.b.a.a.b.b.a	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Panthera	ANCESTRAL SPECIES	21	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00980000200292	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000157455.b.b.a	ENSGT00390000009819.a.b.a.a.b.b.a	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00980000200292	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000157455.b.b.a	ENSGT00390000009819.a.b.a.a.b.b.a	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
leopard	MODERN SPECIES	14	EPSTI1 (ENSPPRG00000020685)	FAM216B (ENSPPRG00000022155)	TNFSF11 (ENSPPRG00000000387)	AKAP11 (ENSPPRG00000000675)	DGKH (ENSPPRG00000003603)	VWA8 (ENSPPRG00000006962)	RGCC (ENSPPRG00000007126)	ENSPPRG00000017108	ENSPPRG00000017124	NAA16 (ENSPPRG00000008553)	MTRF1 (ENSPPRG00000009511)	KBTBD7 (ENSPPRG00000017314)	KBTBD6 (ENSPPRG00000009810)	WBP4 (ENSPPRG00000009978)	ELF1 (ENSPPRG00000010166)	SUGT1 (ENSPPRG00000011927) #22	CNMD (ENSPPRG00000012553) #23	PCDH8 (ENSPPRG00000013087) #24	ENSPPRG00000013420	OLFM4 (ENSPPRG00000013541) #25	ENSPPRG00000013617
lion	MODERN SPECIES	1	ENOX1 (ENSPLOG00000014204)	DNAJC15 (ENSPLOG00000014175)	EPSTI1 (ENSPLOG00000014127)	FAM216B (ENSPLOG00000014067)	TNFSF11 (ENSPLOG00000013952)	AKAP11 (ENSPLOG00000013869)	DGKH (ENSPLOG00000013638)	VWA8 (ENSPLOG00000013476)	RGCC (ENSPLOG00000013395)	NAA16 (ENSPLOG00000013005)	MTRF1 (ENSPLOG00000012808)	KBTBD7 (ENSPLOG00000012777)	KBTBD6 (ENSPLOG00000012750)	WBP4 (ENSPLOG00000012662)	ELF1 (ENSPLOG00000012608)	SUGT1 (ENSPLOG00000012464) #22	CNMD (ENSPLOG00000012326) #23	PCDH8 (ENSPLOG00000012248) #24	OLFM4 (ENSPLOG00000012216) #25	PCDH17 (ENSPLOG00000012087) #29	ENSPLOG00000012058 #30	ENSPLOG00000012042	DIAPH3 (ENSPLOG00000011292) #31	TDRD3 (ENSPLOG00000011058) #34	PCDH20 (ENSPLOG00000010988) #36	ENSPLOG00000010944	PCDH9 (ENSPLOG00000010834)	ENSPLOG00000010804	ENSPLOG00000010777	ENSPLOG00000010757 ##9	KLHL1 (ENSPLOG00000010621)
Tiger	MODERN SPECIES	221	ENSPTIG00000006302	ENOX1 (ENSPTIG00000014489)	DNAJC15 (ENSPTIG00000013715)	EPSTI1 (ENSPTIG00000011254)	FAM216B (ENSPTIG00000010708)	TNFSF11 (ENSPTIG00000007595)	AKAP11 (ENSPTIG00000004721)	DGKH (ENSPTIG00000016136)	VWA8 (ENSPTIG00000011005)	ENSPTIG00000005941	NAA16 (ENSPTIG00000007921)	MTRF1 (ENSPTIG00000006673)	KBTBD7 (ENSPTIG00000005920)	WBP4 (ENSPTIG00000003187)	ELF1 (ENSPTIG00000021757)	SUGT1 (ENSPTIG00000021452) #22	CNMD (ENSPTIG00000021297) #23	ENSPTIG00000021180	OLFM4 (ENSPTIG00000020774) #25	PCDH17 (ENSPTIG00000020639) #29	ENSPTIG00000005868 #30
Cat	MODERN SPECIES		ENOX1 (ENSFCAG00000010984)	DNAJC15 (ENSFCAG00000022632)	EPSTI1 (ENSFCAG00000030356)	FAM216B (ENSFCAG00000039318)	TNFSF11 (ENSFCAG00000005912)	AKAP11 (ENSFCAG00000005913)	DGKH (ENSFCAG00000005292)	VWA8 (ENSFCAG00000005291)	RGCC (ENSFCAG00000038293)	NAA16 (ENSFCAG00000007219)	MTRF1 (ENSFCAG00000031635)	KBTBD7 (ENSFCAG00000006263)	KBTBD6 (ENSFCAG00000034478)	WBP4 (ENSFCAG00000035581)	ELF1 (ENSFCAG00000029010)	SUGT1 (ENSFCAG00000005544) #22	CNMD (ENSFCAG00000010131) #23	PCDH8 (ENSFCAG00000010132) #24	OLFM4 (ENSFCAG00000031021) #25	ENSFCAG00000035797	PCDH17 (ENSFCAG00000024553) #29	ENSFCAG00000053374 #30	DIAPH3 (ENSFCAG00000027832) #31	TDRD3 (ENSFCAG00000022126) #34	PCDH20 (ENSFCAG00000024165) #36	PCDH9 (ENSFCAG00000013764)	ENSFCAG00000036681	ENSFCAG00000023806	KLHL1 (ENSFCAG00000004830)	DACH1 (ENSFCAG00000027420)	MZT1 (ENSFCAG00000039219)
Caniformia	ANCESTRAL SPECIES	24	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00950000185146.d	ENSGT00900000143309	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00950000185064	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454.j #25	ENSGT00950000185146.d	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425.e.a	ENSGT00940000160425.e.b	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C
Mustelinae	ANCESTRAL SPECIES	71	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00550000076230	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454.j #25	ENSGT00950000185146.d	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36
Ferret	MODERN SPECIES	232	EPSTI1 (ENSMPUG00000001709)	FAM216B (ENSMPUG00000001713)	TNFSF11 (ENSMPUG00000001717)	ENSMPUG00000001755	AKAP11 (ENSMPUG00000001756)	DGKH (ENSMPUG00000001760)	ENSMPUG00000001845	VWA8 (ENSMPUG00000001847)	RGCC (ENSMPUG00000001865)	NAA16 (ENSMPUG00000001871)	MTRF1 (ENSMPUG00000001874)	KBTBD7 (ENSMPUG00000001878)	KBTBD6 (ENSMPUG00000019416)	WBP4 (ENSMPUG00000001879)	ELF1 (ENSMPUG00000001881)	SUGT1 (ENSMPUG00000001883) #22	CNMD (ENSMPUG00000001886) #23	PCDH8 (ENSMPUG00000001889) #24	ENSMPUG00000001897	ENSMPUG00000001900	OLFM4 (ENSMPUG00000001907) #25	ENSMPUG00000001911 #24	ENSMPUG00000001921
American mink	MODERN SPECIES	193	DNAJC15 (ENSNVIG00000001037)	EPSTI1 (ENSNVIG00000001071)	FAM216B (ENSNVIG00000001108)	TNFSF11 (ENSNVIG00000001142)	AKAP11 (ENSNVIG00000001185)	DGKH (ENSNVIG00000001217)	VWA8 (ENSNVIG00000001438)	RGCC (ENSNVIG00000001512)	NAA16 (ENSNVIG00000001540)	ENSNVIG00000001628	RF1M (ENSNVIG00000001641)	KBTBD7 (ENSNVIG00000001658)	KBTBD6 (ENSNVIG00000001665)	WBP4 (ENSNVIG00000001685)	ELF1 (ENSNVIG00000001703)	SUGT1 (ENSNVIG00000001753) #22	CNMD (ENSNVIG00000001796) #23
Ursidae	ANCESTRAL SPECIES	27	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454.j #25	ENSGT00950000185146.d	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT01030000235363	ENSGT00940000160425.f	ENSGT00940000160425.e.b	ENSGT00390000001134.a.a	ENSGT00390000005954	ENSGT00390000013790
Giant Panda	MODERN SPECIES	17	ENOX1 (ENSAMEG00000017297)	DNAJC15 (ENSAMEG00000027146)	EPSTI1 (ENSAMEG00000016302)	FAM216B (ENSAMEG00000024062)	ENSAMEG00000023893	AKAP11 (ENSAMEG00000008857)	DGKH (ENSAMEG00000008800)	VWA8 (ENSAMEG00000008732)	RGCC (ENSAMEG00000023477)	NAA16 (ENSAMEG00000008721)	MTRF1 (ENSAMEG00000008696)	KBTBD7 (ENSAMEG00000018934)	KBTBD6 (ENSAMEG00000018925)	WBP4 (ENSAMEG00000008668)	ENSAMEG00000008636	ENSAMEG00000008606 #22	ENSAMEG00000008596 #23	PCDH8 (ENSAMEG00000029609) #24	ENSAMEG00000008583 #25	ENSAMEG00000025942	PCDH17 (ENSAMEG00000018131) #29	DIAPH3 (ENSAMEG00000000086) #31	TDRD3 (ENSAMEG00000000082) #34	ENSAMEG00000000080	PCDH20 (ENSAMEG00000000079) #36	PCDH9 (ENSAMEG00000019019)	ENSAMEG00000025349	ENSAMEG00000031424	ENSAMEG00000019011	ENSAMEG00000005121	DACH1 (ENSAMEG00000012408)
Ursus	ANCESTRAL SPECIES	62	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454.j #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b
American black bear	MODERN SPECIES	7567																ENSUAMG00000011412 #22
Polar bear	MODERN SPECIES	297	DNAJC15 (ENSUMAG00000016026)	ENSUMAG00000016020	EPSTI1 (ENSUMAG00000016009)	FAM216B (ENSUMAG00000015984)	TNFSF11 (ENSUMAG00000015977)	AKAP11 (ENSUMAG00000015963)	DGKH (ENSUMAG00000015512)	VWA8 (ENSUMAG00000014915)	ENSUMAG00000014782	NAA16 (ENSUMAG00000014778)	MTRF1 (ENSUMAG00000014772)	KBTBD7 (ENSUMAG00000014764)	KBTBD6 (ENSUMAG00000014753)	WBP4 (ENSUMAG00000014750)	ELF1 (ENSUMAG00000014744)	SUGT1 (ENSUMAG00000014735) #22	CNMD (ENSUMAG00000014733) #23	ENSUMAG00000014724	OLFM4 (ENSUMAG00000014718) #25	PCDH17 (ENSUMAG00000014678) #29	DIAPH3 (ENSUMAG00000014591) #31	TDRD3 (ENSUMAG00000014526) #34	PCDH20 (ENSUMAG00000014497) #36	ENSUMAG00000014473	ENSUMAG00000014463
Canidae	ANCESTRAL SPECIES	38	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00950000185146.d	ENSGT00900000143309	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00390000008902.i.a.a.a	ENSGT00940000154550.a.e.a.d.a.b	ENSGT00940000155079.b	ENSGT00940000160425
Canis_lupus	ANCESTRAL SPECIES	35	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00940000154205.h.wc.b	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.A	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00900000143309	ENSGT00900000143708	ENSGT00940000156894 #29	ENSGT00950000185300.c	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00390000008902.i.a.a.a.d	ENSGT00940000154640.a.a.a.e	ENSGT00940000154550.a.e.a.d.a.b	ENSGT00940000155079.b	ENSGT00940000160425
Dog	MODERN SPECIES	14	DNAJC15 (ENSCAFG00845010203)	ENSCAFG00845010306	FAM216B (ENSCAFG00845010557)	TNFSF11 (ENSCAFG00845010618)	AKAP11 (ENSCAFG00845010732)	DGKH (ENSCAFG00845010984)	ENSCAFG00845011514	VWA8 (ENSCAFG00845011611)	RGCC (ENSCAFG00845012012)	NAA16 (ENSCAFG00845012159)	MTRF1 (ENSCAFG00845012616)	ENSCAFG00845012746	KBTBD6 (ENSCAFG00845012777)	WBP4 (ENSCAFG00845012821)	ELF1 (ENSCAFG00845012922)	ENSCAFG00845013012 #22	ENSCAFG00845013032 #23	ENSCAFG00845013086 #24	OLFM4 (ENSCAFG00845013112) #25	ENSCAFG00845013167	ENSCAFG00845013231 #24	ENSCAFG00845019030	PCDH17 (ENSCAFG00845019099) #29	ENSCAFG00845019184	ENSCAFG00845019341 #31	TDRD3 (ENSCAFG00845020184) #34	ENSCAFG00845020382	ENSCAFG00845020421	ENSCAFG00845020440	ENSCAFG00845020466	ENSCAFG00845020550 #36
Dingo	DUPLICATION
Dingo	MODERN SPECIES	7	FAM216B (ENSCAFG00020018715)	TNFSF11 (ENSCAFG00020018702)	AKAP11 (ENSCAFG00020018682)	DGKH (ENSCAFG00020018605)	ENSCAFG00020018598	VWA8 (ENSCAFG00020018227)	RGCC (ENSCAFG00020018187)	ENSCAFG00020018184	ENSCAFG00020018183	MTRF1 (ENSCAFG00020018178)	ENSCAFG00020018176	KBTBD7 (ENSCAFG00020018174)	KBTBD6 (ENSCAFG00020018170)	WBP4 (ENSCAFG00020018156)	ELF1 (ENSCAFG00020018152)	SUGT1 (ENSCAFG00020018144) #22	CNMD (ENSCAFG00020018141) #23	PCDH8 (ENSCAFG00020018138) #24	OLFM4 (ENSCAFG00020018137) #25	ENSCAFG00020018121	ENSCAFG00020018112	PCDH17 (ENSCAFG00020018109) #29	ENSCAFG00020018107	ENSCAFG00020018106	DIAPH3 (ENSCAFG00020018085) #31	ENSCAFG00020018076 #34	ENSCAFG00020018074	ENSCAFG00020018072	ENSCAFG00020018067	PCDH20 (ENSCAFG00020018062) #36	ENSCAFG00020018055
Dingo	MODERN SPECIES	210							ENSCAFG00020010712	ITGB1 (ENSCAFG00020010708)	NRP1 (ENSCAFG00020010015)	ENSCAFG00020009959	ENSCAFG00020009948	ENSCAFG00020009944	PARD3 (ENSCAFG00020002064)	CUL2 (ENSCAFG00020001102)	ENSCAFG00020001058	ENSCAFG00020001003 #22	CREM (ENSCAFG00020000830)	CCNY (ENSCAFG00020000769)	FZD8 (ENSCAFG00020000760)	ENSCAFG00020000747	ENSCAFG00020000736	ENSCAFG00020000706	ENSCAFG00020000686
Red fox	DUPLICATION
Red fox	MODERN SPECIES	78	ENSVVUG00000028527	ENSVVUG00000028538	FAM216B (ENSVVUG00000028542)	TNFSF11 (ENSVVUG00000028544)	AKAP11 (ENSVVUG00000028556)	DGKH (ENSVVUG00000028597)	VWA8 (ENSVVUG00000028708)	ENSVVUG00000028742	NAA16 (ENSVVUG00000028743)	MTRF1 (ENSVVUG00000028755)	ENSVVUG00000028757	ENSVVUG00000028758	KBTBD6 (ENSVVUG00000028760)	WBP4 (ENSVVUG00000028761)	ELF1 (ENSVVUG00000028763)	SUGT1 (ENSVVUG00000028767) #22	CNMD (ENSVVUG00000028772) #23	PCDH8 (ENSVVUG00000028776) #24	OLFM4 (ENSVVUG00000028777) #25	ENSVVUG00000028790	ENSVVUG00000028792	ENSVVUG00000028804	ENSVVUG00000028805	ENSVVUG00000028807	ENSVVUG00000028813	PCDH17 (ENSVVUG00000028814) #29	ENSVVUG00000028816 #30	DIAPH3 (ENSVVUG00000028837) #31	TDRD3 (ENSVVUG00000029140) #34	ENSVVUG00000029144	ENSVVUG00000029146
Red fox	MODERN SPECIES	34	BAMBI (ENSVVUG00000002038)	ENSVVUG00000002027	WAC (ENSVVUG00000001960)	ENSVVUG00000001929	MPP7 (ENSVVUG00000001838)	ENSVVUG00000001780	ODAD2 (ENSVVUG00000001752)	MKX (ENSVVUG00000001722)	RAB18 (ENSVVUG00000001705)	ENSVVUG00000001626	ENSVVUG00000001595	ENSVVUG00000001370	ITGB1 (ENSVVUG00000001326)	NRP1 (ENSVVUG00000001280)	PARD3 (ENSVVUG00000001010)	ENSVVUG00000000938 #22	CUL2 (ENSVVUG00000000868)	CREM (ENSVVUG00000000824)	CCNY (ENSVVUG00000000773)	FZD8 (ENSVVUG00000000700)	ENSVVUG00000000671	ENSVVUG00000000653	ENSVVUG00000000638
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.C	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT01100000267130	ENSGT00940000155079.b
Xenarthra	ANCESTRAL SPECIES	365												ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.C	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36
Armadillo	MODERN SPECIES	1972								NAA16 (ENSDNOG00000004473)	MTRF1 (ENSDNOG00000034196)	ENSDNOG00000010598	ENSDNOG00000049006	WBP4 (ENSDNOG00000046013)	ENSDNOG00000038203	ENSDNOG00000030716	ELF1 (ENSDNOG00000011236)	SUGT1 (ENSDNOG00000002991) #22	CNMD (ENSDNOG00000002992) #23	PCDH8 (ENSDNOG00000049263) #24	ENSDNOG00000018891 #25	ENSDNOG00000032912	ENSDNOG00000044136	PCDH17 (ENSDNOG00000031265) #29	DIAPH3 (ENSDNOG00000015042) #31	TDRD3 (ENSDNOG00000002011) #34	PCDH20 (ENSDNOG00000040232) #36
Afrotheria	ANCESTRAL SPECIES	54	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.C	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b
Afrotheria_a	ANCESTRAL SPECIES	52	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT00940000154512.a	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000155175.C	ENSGT00940000155175.B	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00940000157767 #31	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b
Elephant	MODERN SPECIES	239	FAM216B (ENSLAFG00000032301)	TNFSF11 (ENSLAFG00000011256)	ENSLAFG00000029763	ENSLAFG00000005777	DGKH (ENSLAFG00000009623)	ENSLAFG00000025669	VWA8 (ENSLAFG00000007982)	RGCC (ENSLAFG00000003234)	NAA16 (ENSLAFG00000003231)	ENSLAFG00000031338	ENSLAFG00000022177	ENSLAFG00000017831	KBTBD6 (ENSLAFG00000009917)	WBP4 (ENSLAFG00000005901)	ELF1 (ENSLAFG00000032117)	SUGT1 (ENSLAFG00000009157) #22	CNMD (ENSLAFG00000018396) #23	PCDH8 (ENSLAFG00000012913) #24	OLFM4 (ENSLAFG00000018242) #25	PCDH17 (ENSLAFG00000002377) #29	DIAPH3 (ENSLAFG00000008135) #31	TDRD3 (ENSLAFG00000002705) #34	PCDH20 (ENSLAFG00000031335) #36	ENSLAFG00000027466	ENSLAFG00000030478	ENSLAFG00000030868	ENSLAFG00000027452	ENSLAFG00000025700	PCDH9 (ENSLAFG00000029953)	ENSLAFG00000032234
Hyrax	MODERN SPECIES	4891																SUGT1 (ENSPCAG00000009293) #22
Tenrec	MODERN SPECIES	5777																SUGT1 (ENSETEG00000006344) #22	ENSETEG00000006347 #23
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000164962	ENSGT00990000203769	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157843	ENSGT00940000157767 #31	ENSGT00940000181563	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000153064.b.b.a.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000164962.a	ENSGT00990000203769	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25	ENSGT00940000153700.jc.a.a.b	ENSGT00940000156894 #29	ENSGT00900000143582 #30	ENSGT00940000157843	ENSGT00940000157767 #31	ENSGT00940000181563	ENSGT00940000155487 #34	ENSGT00940000156743 #36	ENSGT00940000155079.b	ENSGT00940000160425	ENSGT00390000001134.a.a	ENSGT00390000005954
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000164962.a	ENSGT00990000203769	ENSGT00390000013956	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00390000005130	ENSGT00390000006788.a.b	ENSGT00940000159907	ENSGT00390000013820	ENSGT01070000253816.a.a.b	ENSGT00940000153313.B	ENSGT00940000158106	ENSGT00390000006601	ENSGT00390000011709	ENSGT00950000183174.B.b	ENSGT00940000156877	ENSGT00940000164962.a	ENSGT00990000203769	ENSGT00390000013956.a	ENSGT00940000157039.b	ENSGT00390000013700 #22	ENSGT00480000042679.b.b #23	ENSGT00940000155219 #24	ENSGT00940000155454 #25
Common wonbat	MODERN SPECIES	1038	ENOX1 (ENSVURG00010009418)	DNAJC15 (ENSVURG00010009445)	EPSTI1 (ENSVURG00010009463)	TNFSF11 (ENSVURG00010009490)	AKAP11 (ENSVURG00010009504)	DGKH (ENSVURG00010009526)	VWA8 (ENSVURG00010009546)	RGCC (ENSVURG00010009578)	ENSVURG00010009585	ENSVURG00010009594	ENSVURG00010009596	MTRF1 (ENSVURG00010009603)	ENSVURG00010009611	ENSVURG00010009621	ELF1 (ENSVURG00010009633)	SUGT1 (ENSVURG00010009644) #22	CNMD (ENSVURG00010009659) #23	PCDH8 (ENSVURG00010009669) #24	ENSVURG00010009679	ENSVURG00010009690	ENSVURG00010009692	ENSVURG00010009695
koala	MODERN SPECIES	307				TNFSF11 (ENSPCIG00000018741)	AKAP11 (ENSPCIG00000013002)	DGKH (ENSPCIG00000012983)	VWA8 (ENSPCIG00000012960)	RGCC (ENSPCIG00000012956)	ENSPCIG00000034063	ENSPCIG00000012948	MTRF1 (ENSPCIG00000012940)	ENSPCIG00000012938	ENSPCIG00000035197	ENSPCIG00000012936	ELF1 (ENSPCIG00000012932)	SUGT1 (ENSPCIG00000012922) #22	CNMD (ENSPCIG00000012920) #23	PCDH8 (ENSPCIG00000012919) #24	OLFM4 (ENSPCIG00000036054) #25	ENSPCIG00000018583 #24
Tasmanian devil	MODERN SPECIES	2	CCDC122 (ENSSHAG00000022118)	ENOX1 (ENSSHAG00000012702)	DNAJC15 (ENSSHAG00000011722)	ENSSHAG00000010849	TNFSF11 (ENSSHAG00000001297)	AKAP11 (ENSSHAG00000022883)	DGKH (ENSSHAG00000001014)	ENSSHAG00000022714	VWA8 (ENSSHAG00000027337)	RGCC (ENSSHAG00000029520)	NAA16 (ENSSHAG00000018196)	MTRF1 (ENSSHAG00000018109)	ENSSHAG00000023806	WBP4 (ENSSHAG00000018027)	ENSSHAG00000017887	ENSSHAG00000027194 #22	ENSSHAG00000021232 #23	PCDH8 (ENSSHAG00000024494) #24	OLFM4 (ENSSHAG00000017198) #25	ENSSHAG00000030587	ENSSHAG00000011884	ENSSHAG00000031334	PCDH17 (ENSSHAG00000030397) #29	ENSSHAG00000029234 #30	ENSSHAG00000015066	ENSSHAG00000020824	DIAPH3 (ENSSHAG00000014221) #31	ENSSHAG00000029149	TDRD3 (ENSSHAG00000011994) #34	ENSSHAG00000021559	ENSSHAG00000026280
Opossum	MODERN SPECIES	6	TNFSF11 (ENSMODG00000014856)	ENSMODG00000024949	ENSMODG00000051302	ENSMODG00000046331	AKAP11 (ENSMODG00000014848)	DGKH (ENSMODG00000014844)	ENSMODG00000046520	VWA8 (ENSMODG00000014823)	RGCC (ENSMODG00000014805)	NAA16 (ENSMODG00000014799)	MTRF1 (ENSMODG00000014772)	ENSMODG00000050131	ENSMODG00000045233	WBP4 (ENSMODG00000014761)	ELF1 (ENSMODG00000014756)	SUGT1 (ENSMODG00000014748) #22	CNMD (ENSMODG00000014743) #23	PCDH8 (ENSMODG00000014739) #24	OLFM4 (ENSMODG00000047878) #25	ENSMODG00000014727 #24	ENSMODG00000024964	ENSMODG00000046257	ENSMODG00000044832	ENSMODG00000028702	ENSMODG00000048827	ENSMODG00000044149	ENSMODG00000006412	PCDH17 (ENSMODG00000006409) #29	HDAC8 (ENSMODG00000024915)	ENSMODG00000047947	DIAPH3 (ENSMODG00000006363) #31
Platypus	MODERN SPECIES	11	ENSOANG00000044038	ENSOANG00000011164	ENSOANG00000014837	IL1R1 (ENSOANG00000011165)	IL1R2 (ENSOANG00000008234)	MAP4K4 (ENSOANG00000008236)	ENSOANG00000016016	ENSOANG00000002853	RNF149 (ENSOANG00000003086)	CNOT11 (ENSOANG00000013148)	MTRF1 (ENSOANG00000003383)	ENSOANG00000050275	ENSOANG00000042040	WBP4 (ENSOANG00000039659)	ELF1 (ENSOANG00000013391)	SUGT1 (ENSOANG00000020356) #22	CNMD (ENSOANG00000010093) #23	ENSOANG00000048430 #24	OLFM4 (ENSOANG00000037547) #25	ENSOANG00000039527 #24	ENSOANG00000016066	PCDH17 (ENSOANG00000041426) #29	ENSOANG00000038739	DIAPH3 (ENSOANG00000006997) #31	TDRD3 (ENSOANG00000011775) #34	ENSOANG00000038658	PCDH20 (ENSOANG00000015235) #36	ENSOANG00000020115	ENSOANG00000009455	ENSOANG00000048359	KLHL1 (ENSOANG00000006018)