Amniota	ANCESTRAL SPECIES	4	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000178986	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT00940000164634
Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT00940000164634	ENSGT00940000166139
Theria	ANCESTRAL SPECIES	11	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01070000254624	ENSGT01030000234969
Eutheria	ANCESTRAL SPECIES	20	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT01050000244995 #36
Boreoeutheria	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Primates	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Vervet Monkey	MODERN SPECIES	9	ENSCSAG00000017947 #7	ENSCSAG00000017949 #8	SLC14A2 (ENSCSAG00000017951) #9	SLC14A1 (ENSCSAG00000017952) #10	SIGLEC15 (ENSCSAG00000017954) #11	EPG5 (ENSCSAG00000017960) #12	PSTPIP2 (ENSCSAG00000017965) #13	ATP5F1A (ENSCSAG00000017968) #14	HAUS1 (ENSCSAG00000017970) #15	C18orf25 (ENSCSAG00000017972) #16	RNF165 (ENSCSAG00000017974) #17	LOXHD1 (ENSCSAG00000017984) #18	ST8SIA5 (ENSCSAG00000017993) #19	PIAS2 (ENSCSAG00000017995) #20	ELOA2 (ENSCSAG00000018570) #21	KATNAL2 (ENSCSAG00000018001) #22	HDHD2 (ENSCSAG00000018007) #23	IER3IP1 (ENSCSAG00000018009) #24	SKOR2 (ENSCSAG00000018012) #25	SMAD2 (ENSCSAG00000018016) #26	ZBTB7C (ENSCSAG00000018018) #27	CTIF (ENSCSAG00000018021) #28	SMAD7 (ENSCSAG00000018024) #29	ENSCSAG00000018569 #30	DYM (ENSCSAG00000018028) #31	C18orf32 (ENSCSAG00000018029) #32	LIPG (ENSCSAG00000018043) #33	ACAA2 (ENSCSAG00000018054) #34	MYO5B (ENSCSAG00000018060) #35	CFAP53 (ENSCSAG00000018065) #36	MBD1 (ENSCSAG00000018070) #37
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34
Macaca	ANCESTRAL SPECIES	22	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.a.a.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.a.b.b	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.b.a.a	ENSGT00940000155478.r	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Crab-eating macaque	MODERN SPECIES	9	SIGLEC15 (ENSMFAG00000031829) #11	EPG5 (ENSMFAG00000042030) #12	PSTPIP2 (ENSMFAG00000037150) #13	ATP5F1A (ENSMFAG00000001649) #14	ENSMFAG00000049075	HAUS1 (ENSMFAG00000043557) #15	ENSMFAG00000052445	C18orf25 (ENSMFAG00000042249) #16	RNF165 (ENSMFAG00000000616) #17	LOXHD1 (ENSMFAG00000037181) #18	ST8SIA5 (ENSMFAG00000035970) #19	ENSMFAG00000050857	PIAS2 (ENSMFAG00000031982) #20	ENSMFAG00000031695 #21	ENSMFAG00000031677 #21	KATNAL2 (ENSMFAG00000029779) #22	HDHD2 (ENSMFAG00000012951) #23	IER3IP1 (ENSMFAG00000060309) #24	ENSMFAG00000063952 #25	SMAD2 (ENSMFAG00000045652) #26	ZBTB7C (ENSMFAG00000031667) #27	ENSMFAG00000058784	ENSMFAG00000052298	CTIF (ENSMFAG00000037903) #28	ENSMFAG00000061902	SMAD7 (ENSMFAG00000042998) #29	ENSMFAG00000064429	ENSMFAG00000065559	DYM (ENSMFAG00000031987) #31	C18orf32 (ENSMFAG00000030546) #32	RPL17 (ENSMFAG00000042744)
Rhesus	MODERN SPECIES	9	ENSMMUG00000061645	SLC14A1 (ENSMMUG00000011037) #10	SIGLEC15 (ENSMMUG00000003561) #11	EPG5 (ENSMMUG00000003562) #12	PSTPIP2 (ENSMMUG00000003566) #13	ATP5F1A (ENSMMUG00000003570) #14	HAUS1 (ENSMMUG00000003124) #15	ENSMMUG00000056307	C18H18orf25 (ENSMMUG00000011473) #16	RNF165 (ENSMMUG00000017243) #17	LOXHD1 (ENSMMUG00000017246) #18	ST8SIA5 (ENSMMUG00000002742) #19	ENSMMUG00000050406	PIAS2 (ENSMMUG00000004498) #20	ELOA2 (ENSMMUG00000044172) #21	KATNAL2 (ENSMMUG00000015952) #22	HDHD2 (ENSMMUG00000010999) #23	IER3IP1 (ENSMMUG00000059289) #24	SKOR2 (ENSMMUG00000048459) #25	ENSMMUG00000050569	SMAD2 (ENSMMUG00000007816) #26	ZBTB7C (ENSMMUG00000015704) #27	CTIF (ENSMMUG00000020898) #28	SMAD7 (ENSMMUG00000056276) #29	DYM (ENSMMUG00000001760) #31	RPL17 (ENSMMUG00000018837)	ENSMMUG00000064858	ENSMMUG00000038584	LIPG (ENSMMUG00000019054) #33	ACAA2 (ENSMMUG00000003040) #34	ENSMMUG00000064909
Pig-tailed macaque	MODERN SPECIES	155															ENSMNEG00000040070 #21	KATNAL2 (ENSMNEG00000029817) #22	ENSMNEG00000038574 #23	IER3IP1 (ENSMNEG00000030543) #24	ENSMNEG00000038031 #25	SMAD2 (ENSMNEG00000037330) #26	ZBTB7C (ENSMNEG00000031886) #27	ENSMNEG00000034460	ENSMNEG00000045230	CTIF (ENSMNEG00000039395) #28	SMAD7 (ENSMNEG00000039694) #29	DYM (ENSMNEG00000030545) #31	C18orf32 (ENSMNEG00000037414) #32	ENSMNEG00000035945	LIPG (ENSMNEG00000043610) #33	ACAA2 (ENSMNEG00000037789) #34	MYO5B (ENSMNEG00000033529) #35
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Olive baboon	MODERN SPECIES	10	SYT4 (ENSPANG00000036999)	ENSPANG00000044709	SETBP1 (ENSPANG00000014223) #7	SLC14A2 (ENSPANG00000010314) #9	SLC14A1 (ENSPANG00000010058) #10	SIGLEC15 (ENSPANG00000013868) #11	EPG5 (ENSPANG00000009665) #12	PSTPIP2 (ENSPANG00000019094) #13	ATP5F1A (ENSPANG00000007341) #14	HAUS1 (ENSPANG00000029808) #15	C18orf25 (ENSPANG00000006488) #16	RNF165 (ENSPANG00000025287) #17	LOXHD1 (ENSPANG00000025288) #18	ST8SIA5 (ENSPANG00000024947) #19	PIAS2 (ENSPANG00000016213) #20	KATNAL2 (ENSPANG00000017088) #22	ELOA2 (ENSPANG00000049945) #21	HDHD2 (ENSPANG00000010312) #23	IER3IP1 (ENSPANG00000041314) #24	SKOR2 (ENSPANG00000017535) #25	SMAD2 (ENSPANG00000025520) #26	ZBTB7C (ENSPANG00000016942) #27	CTIF (ENSPANG00000017087) #28	SMAD7 (ENSPANG00000025519) #29	ENSPANG00000046129	ENSPANG00000037588 #31	C18orf32 (ENSPANG00000040941) #32	ENSPANG00000031295	LIPG (ENSPANG00000024235) #33	ACAA2 (ENSPANG00000002878) #34	MYO5B (ENSPANG00000022089) #35
Cercopithecinae_d	ANCESTRAL SPECIES	40	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Drill	MODERN SPECIES	677															ELOA2 (ENSMLEG00000028278) #21	KATNAL2 (ENSMLEG00000029023) #22	HDHD2 (ENSMLEG00000029998) #23	IER3IP1 (ENSMLEG00000034594) #24
Sooty mangabey	MODERN SPECIES	190	SYT4 (ENSCATG00000032803)	SETBP1 (ENSCATG00000033792) #7	SLC14A2 (ENSCATG00000032025) #9	SLC14A1 (ENSCATG00000025983) #10	SIGLEC15 (ENSCATG00000043629) #11	EPG5 (ENSCATG00000038496) #12	PSTPIP2 (ENSCATG00000033892) #13	ATP5F1A (ENSCATG00000025898) #14	HAUS1 (ENSCATG00000025348) #15	C18orf25 (ENSCATG00000039068) #16	RNF165 (ENSCATG00000037696) #17	LOXHD1 (ENSCATG00000036618) #18	ST8SIA5 (ENSCATG00000030338) #19	PIAS2 (ENSCATG00000034031) #20	ELOA2 (ENSCATG00000032113) #21	KATNAL2 (ENSCATG00000037094) #22	HDHD2 (ENSCATG00000035277) #23	IER3IP1 (ENSCATG00000035811) #24	SKOR2 (ENSCATG00000035815) #25	SMAD2 (ENSCATG00000003842) #26	ZBTB7C (ENSCATG00000044413) #27	ENSCATG00000005038	ENSCATG00000045052	CTIF (ENSCATG00000038134) #28	SMAD7 (ENSCATG00000037681) #29	ENSCATG00000037245 ##30	DYM (ENSCATG00000031272) #31	ENSCATG00000018328	ENSCATG00000037257 #32	ENSCATG00000043658	LIPG (ENSCATG00000033603) #33
Rhinopithecus	ANCESTRAL SPECIES	314		ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25
Golden snub-nosed monkey	MODERN SPECIES	782															ELOA2 (ENSRROG00000039990) ##21	KATNAL2 (ENSRROG00000021914) #22	HDHD2 (ENSRROG00000043827) #23	IER3IP1 (ENSRROG00000042481) #24	ENSRROG00000033499 #25
Black snub-nosed monkey	MODERN SPECIES	1904		ENSRBIG00000042956	SETBP1 (ENSRBIG00000031542) #7	SLC14A2 (ENSRBIG00000044802) #9	SLC14A1 (ENSRBIG00000006426) #10	SIGLEC15 (ENSRBIG00000032827) #11	EPG5 (ENSRBIG00000034374) #12	PSTPIP2 (ENSRBIG00000030324) #13	ATP5F1A (ENSRBIG00000039573) #14	HAUS1 (ENSRBIG00000035142) #15	C18orf25 (ENSRBIG00000030339) #16	RNF165 (ENSRBIG00000023642) #17	LOXHD1 (ENSRBIG00000042735) #18	ST8SIA5 (ENSRBIG00000030321) #19	PIAS2 (ENSRBIG00000038220) #20	KATNAL2 (ENSRBIG00000040316) #22	ELOA2 (ENSRBIG00000033712) #21	ENSRBIG00000006980 ##21	ENSRBIG00000034951 #23	IER3IP1 (ENSRBIG00000028883) #24	SKOR2 (ENSRBIG00000043935) #25
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.b ##21	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D.k #34
Hominidae	ANCESTRAL SPECIES	24	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.b ##21	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D.k #34	ENSGT00940000155402.a.b #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.b ##21	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394 #33	ENSGT01030000234626.D.k #34
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.b ##21	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D.k #34	ENSGT00940000155402.a.b.gb #35
Pan	ANCESTRAL SPECIES	24	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00440000033919.b	ENSGT00550000074846.i #14	ENSGT00390000006029 #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b.a.b ##21	ENSGT00390000002428.a.g.b.a.a #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00390000016823.q	ENSGT00910000148711	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000013264.c.a
Bonobo	MODERN SPECIES	9	SYT4 (ENSPPAG00000035230)	SETBP1 (ENSPPAG00000037611) #7	SLC14A2 (ENSPPAG00000036617) #9	SLC14A1 (ENSPPAG00000012434) #10	SIGLEC15 (ENSPPAG00000018825) #11	EPG5 (ENSPPAG00000025948) #12	PSTPIP2 (ENSPPAG00000028251) #13	ENSPPAG00000028807	ATP5F1A (ENSPPAG00000030055) #14	HAUS1 (ENSPPAG00000034062) #15	C18orf25 (ENSPPAG00000034677) #16	RNF165 (ENSPPAG00000035141) #17	LOXHD1 (ENSPPAG00000023447) #18	ST8SIA5 (ENSPPAG00000032695) #19	PIAS2 (ENSPPAG00000035511) #20	KATNAL2 (ENSPPAG00000019290) #22	ENSPPAG00000027606 ##21	ENSPPAG00000028060 #21	HDHD2 (ENSPPAG00000028597) #23	IER3IP1 (ENSPPAG00000029166) #24	ENSPPAG00000030667	ENSPPAG00000032994	SMAD2 (ENSPPAG00000035419) #26	ZBTB7C (ENSPPAG00000039903) #27	ENSPPAG00000033132	ENSPPAG00000041550	CTIF (ENSPPAG00000023554) #28	ENSPPAG00000031318 #29	DYM (ENSPPAG00000033907) #31	C18orf32 (ENSPPAG00000027512) #32	ENSPPAG00000028848
Chimpanzee	MODERN SPECIES	9	SYT4 (ENSPTRG00000009985)	SETBP1 (ENSPTRG00000009986) #7	SLC14A2 (ENSPTRG00000009987) #9	SLC14A1 (ENSPTRG00000009988) #10	SIGLEC15 (ENSPTRG00000024035) #11	EPG5 (ENSPTRG00000009989) #12	PSTPIP2 (ENSPTRG00000009990) #13	ENSPTRG00000051812	ATP5F1A (ENSPTRG00000009991) #14	HAUS1 (ENSPTRG00000009992) #15	C18orf25 (ENSPTRG00000009993) #16	RNF165 (ENSPTRG00000009994) #17	LOXHD1 (ENSPTRG00000009995) #18	ST8SIA5 (ENSPTRG00000009997) #19	PIAS2 (ENSPTRG00000009998) #20	KATNAL2 (ENSPTRG00000009999) #22	ENSPTRG00000041809 ##21	ELOA2 (ENSPTRG00000029302) #21	HDHD2 (ENSPTRG00000010001) #23	IER3IP1 (ENSPTRG00000010002) #24	SKOR2 (ENSPTRG00000033850) #25	ENSPTRG00000051288	ENSPTRG00000049336	ENSPTRG00000051707	SMAD2 (ENSPTRG00000043695) #26	ZBTB7C (ENSPTRG00000010006) #27	ENSPTRG00000050449	ENSPTRG00000045008	CTIF (ENSPTRG00000010009) #28	SMAD7 (ENSPTRG00000010010) #29	DYM (ENSPTRG00000010011) #31
Human	MODERN SPECIES	9	RIT2 (ENSG00000152214)	SYT4 (ENSG00000132872)	SETBP1 (ENSG00000152217) #7	SLC14A2 (ENSG00000132874) #9	SLC14A1 (ENSG00000141469) #10	EPG5 (ENSG00000152223) #12	SIGLEC15 (ENSG00000197046) #11	PSTPIP2 (ENSG00000152229) #13	ATP5F1A (ENSG00000152234) #14	HAUS1 (ENSG00000152240) #15	C18orf25 (ENSG00000152242) #16	RNF165 (ENSG00000141622) #17	LOXHD1 (ENSG00000167210) #18	ST8SIA5 (ENSG00000101638) #19	PIAS2 (ENSG00000078043) #20	KATNAL2 (ENSG00000167216) #22	ELOA2 (ENSG00000206181) #21	HDHD2 (ENSG00000167220) #23	IER3IP1 (ENSG00000134049) #24	SKOR2 (ENSG00000215474) #25	SMAD2 (ENSG00000175387) #26	ZBTB7C (ENSG00000184828) #27	CTIF (ENSG00000134030) #28	SMAD7 (ENSG00000101665) #29	DYM (ENSG00000141627) #31	C18orf32 (ENSG00000177576) #32	RPL17-C18orf32 (ENSG00000215472)	RPL17 (ENSG00000265681)	LIPG (ENSG00000101670) #33	ACAA2 (ENSG00000167315) #34	MYO5B (ENSG00000167306) #35
Gorilla	MODERN SPECIES	9	RIT2 (ENSGGOG00000005603)	SYT4 (ENSGGOG00000006097)	SETBP1 (ENSGGOG00000014151) #7	SLC14A2 (ENSGGOG00000001047) #9	SLC14A1 (ENSGGOG00000008152) #10	SIGLEC15 (ENSGGOG00000007810) #11	EPG5 (ENSGGOG00000007816) #12	PSTPIP2 (ENSGGOG00000025030) #13	ENSGGOG00000041127	ATP5F1A (ENSGGOG00000016560) #14	HAUS1 (ENSGGOG00000010098) #15	RNF165 (ENSGGOG00000005584) #17	LOXHD1 (ENSGGOG00000005588) #18	ST8SIA5 (ENSGGOG00000013794) #19	PIAS2 (ENSGGOG00000025821) #20	KATNAL2 (ENSGGOG00000006796) #22	ENSGGOG00000040155 ##21	ENSGGOG00000041035 ##21	ENSGGOG00000044154 ##21	ENSGGOG00000010534 #21	HDHD2 (ENSGGOG00000016414) #23	IER3IP1 (ENSGGOG00000027939) #24	ENSGGOG00000022397	SKOR2 (ENSGGOG00000006679) #25	ENSGGOG00000037285	SMAD2 (ENSGGOG00000004706) #26	ZBTB7C (ENSGGOG00000008438) #27	ENSGGOG00000022625	ENSGGOG00000037898	CTIF (ENSGGOG00000015204) #28	ENSGGOG00000010554 #29
Orangutan	MODERN SPECIES	9	RIT2 (ENSPPYG00000009121)	SYT4 (ENSPPYG00000009122)	SETBP1 (ENSPPYG00000009123) #7	SLC14A2 (ENSPPYG00000009124) #9	SLC14A1 (ENSPPYG00000009125) #10	SIGLEC15 (ENSPPYG00000009127) #11	EPG5 (ENSPPYG00000009128) #12	PSTPIP2 (ENSPPYG00000009129) #13	ATP5F1A (ENSPPYG00000009130) #14	HAUS1 (ENSPPYG00000009131) #15	C18H18orf25 (ENSPPYG00000009132) #16	RNF165 (ENSPPYG00000009133) #17	LOXHD1 (ENSPPYG00000009134) #18	ST8SIA5 (ENSPPYG00000009135) #19	PIAS2 (ENSPPYG00000009136) #20	KATNAL2 (ENSPPYG00000009138) #22	ENSPPYG00000009137 ##21	HDHD2 (ENSPPYG00000009139) #23	IER3IP1 (ENSPPYG00000009140) #24	SKOR2 (ENSPPYG00000009142) #25	ENSPPYG00000030833	ENSPPYG00000037397	SMAD2 (ENSPPYG00000009144) #26	ZBTB7C (ENSPPYG00000009145) #27	CTIF (ENSPPYG00000009147) #28	SMAD7 (ENSPPYG00000009148) #29	DYM (ENSPPYG00000009149) #31	C18orf32 (ENSPPYG00000033389) #32	ENSPPYG00000009151	LIPG (ENSPPYG00000009153) #33	ACAA2 (ENSPPYG00000009154) #34
Gibbon	MODERN SPECIES	19	SIGLEC15 (ENSNLEG00000010918) #11	EPG5 (ENSNLEG00000010921) #12	PSTPIP2 (ENSNLEG00000010965) #13	ATP5F1A (ENSNLEG00000010973) #14	HAUS1 (ENSNLEG00000011216) #15	C18orf25 (ENSNLEG00000011251) #16	RNF165 (ENSNLEG00000011270) #17	LOXHD1 (ENSNLEG00000011276) #18	ST8SIA5 (ENSNLEG00000011343) #19	PIAS2 (ENSNLEG00000011351) #20	ENSNLEG00000032966 ##21	ENSNLEG00000031576 ##21	ENSNLEG00000034552 ##21	ENSNLEG00000026544 ##21	ELOA2 (ENSNLEG00000011422) #21	KATNAL2 (ENSNLEG00000011402) #22	HDHD2 (ENSNLEG00000036069) #23	ENSNLEG00000029962	IER3IP1 (ENSNLEG00000011450) #24	ENSNLEG00000029297 #25	ENSNLEG00000029516	ENSNLEG00000011462	SMAD2 (ENSNLEG00000011463) #26	ZBTB7C (ENSNLEG00000011492) #27	ENSNLEG00000011500	ENSNLEG00000030200	CTIF (ENSNLEG00000011503) #28	SMAD7 (ENSNLEG00000034951) #29	ENSNLEG00000032202 #31	ENSNLEG00000011539 #31	C18orf32 (ENSNLEG00000011553) #32
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029.a #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Mas night monkey	MODERN SPECIES	426	SLC14A2 (ENSANAG00000024503) #9	SLC14A1 (ENSANAG00000035909) #10	SIGLEC15 (ENSANAG00000020739) #11	EPG5 (ENSANAG00000028542) #12	PSTPIP2 (ENSANAG00000033626) #13	ENSANAG00000026020	ENSANAG00000036960	ATP5F1A (ENSANAG00000020684) #14	ENSANAG00000034812 #15	C18orf25 (ENSANAG00000015359) #16	RNF165 (ENSANAG00000032671) #17	LOXHD1 (ENSANAG00000026289) #18	ST8SIA5 (ENSANAG00000020554) #19	PIAS2 (ENSANAG00000036127) #20	ENSANAG00000027601	KATNAL2 (ENSANAG00000030359) #22	HDHD2 (ENSANAG00000036024) #23	ENSANAG00000023759	IER3IP1 (ENSANAG00000023921) #24	SKOR2 (ENSANAG00000030804) #25	ENSANAG00000030706	SMAD2 (ENSANAG00000031458) #26	ZBTB7C (ENSANAG00000033116) #27	CTIF (ENSANAG00000024925) #28	SMAD7 (ENSANAG00000028079) #29	DYM (ENSANAG00000029190) #31	ENSANAG00000032933	ENSANAG00000038237	LIPG (ENSANAG00000020805) #33	ACAA2 (ENSANAG00000033683) #34	MYO5B (ENSANAG00000027712) #35
Cebidae	ANCESTRAL SPECIES	28	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029.a #15	ENSGT00390000016167.g #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.`b.a #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741.ab #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029.a #15	ENSGT00390000016167.g #16	ENSGT00940000154677.g.a.d	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.`b.a #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741.ab #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Capuchin	MODERN SPECIES	60	SLC14A2 (ENSCCAG00000022464) #9	SLC14A1 (ENSCCAG00000020737) #10	SIGLEC15 (ENSCCAG00000029871) #11	EPG5 (ENSCCAG00000019864) #12	ENSCCAG00000033907	PSTPIP2 (ENSCCAG00000026201) #13	ATP5F1A (ENSCCAG00000035404) #14	HAUS1 (ENSCCAG00000026991) #15	C18orf25 (ENSCCAG00000013731) #16	ENSCCAG00000028369	RNF165 (ENSCCAG00000015794) #17	LOXHD1 (ENSCCAG00000024237) #18	ST8SIA5 (ENSCCAG00000023326) #19	PIAS2 (ENSCCAG00000022843) #20	ENSCCAG00000033839 #21	KATNAL2 (ENSCCAG00000027056) #22	HDHD2 (ENSCCAG00000022419) #23	IER3IP1 (ENSCCAG00000036067) #24	SKOR2 (ENSCCAG00000021025) #25	ENSCCAG00000037809	SMAD2 (ENSCCAG00000036243) #26	ZBTB7C (ENSCCAG00000034868) #27	CTIF (ENSCCAG00000022758) #28	SMAD7 (ENSCCAG00000033513) #29	ENSCCAG00000037376	DYM (ENSCCAG00000032314) #31	ENSCCAG00000023815 #32	RPL17 (ENSCCAG00000024026)	LIPG (ENSCCAG00000023643) #33	ENSCCAG00000001466	ACAA2 (ENSCCAG00000026857) #34
Bolivian squirrel monkey	MODERN SPECIES	58															ENSSBOG00000029772	KATNAL2 (ENSSBOG00000024912) #22	HDHD2 (ENSSBOG00000023121) #23	IER3IP1 (ENSSBOG00000028824) #24	ENSSBOG00000019888 #25	ENSSBOG00000019181 #30	SMAD2 (ENSSBOG00000036148) #26	ZBTB7C (ENSSBOG00000027938) #27	CTIF (ENSSBOG00000028468) #28	SMAD7 (ENSSBOG00000028839) #29	DYM (ENSSBOG00000031374) #31	C18orf32 (ENSSBOG00000027273) #32	ENSSBOG00000026485	LIPG (ENSSBOG00000017170) #33	ENSSBOG00000034832	ACAA2 (ENSSBOG00000029056) #34	MYO5B (ENSSBOG00000024887) #35
Marmoset	MODERN SPECIES	4	ENSCJAG00000082171	SETBP1 (ENSCJAG00000004035) #7	SLC14A2 (ENSCJAG00000004051) #9	ENSCJAG00000048632 #10	EPG5 (ENSCJAG00000008484) #12	SIGLEC15 (ENSCJAG00000008603) #11	ENSCJAG00000008319 #14	HAUS1 (ENSCJAG00000008303) #15	ENSCJAG00000079309	C18orf25 (ENSCJAG00000008285) #16	ENSCJAG00000075854	RNF165 (ENSCJAG00000073766) #17	LOXHD1 (ENSCJAG00000008221) #18	ST8SIA5 (ENSCJAG00000081047) #19	PIAS2 (ENSCJAG00000008199) #20	KATNAL2 (ENSCJAG00000008107) #22	ENSCJAG00000060346	HDHD2 (ENSCJAG00000004578) #23	IER3IP1 (ENSCJAG00000072341) #24	SKOR2 (ENSCJAG00000048253) #25	ENSCJAG00000071063	SMAD2 (ENSCJAG00000004630) #26	ENSCJAG00000081448 #30	ZBTB7C (ENSCJAG00000004704) #27	CTIF (ENSCJAG00000004729) #28	SMAD7 (ENSCJAG00000039611) #29	ENSCJAG00000067581	ENSCJAG00000060917	DYM (ENSCJAG00000004754) #31	ENSCJAG00000076436 #32	ENSCJAG00000004779
Tarsier	MODERN SPECIES	2204																KATNAL2 (ENSTSYG00000013358) #22	HDHD2 (ENSTSYG00000013360) #23	IER3IP1 (ENSTSYG00000031013) #24	ENSTSYG00000007405 #25
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.s #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.s #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Mouse lemur	MODERN SPECIES	10	SYT4 (ENSMICG00000027289)	SETBP1 (ENSMICG00000017494) #7	SLC14A2 (ENSMICG00000017495) #9	SLC14A1 (ENSMICG00000017496) #10	SIGLEC15 (ENSMICG00000017497) #11	EPG5 (ENSMICG00000017498) #12	PSTPIP2 (ENSMICG00000017499) #13	ENSMICG00000028901 #14	HAUS1 (ENSMICG00000017501) #15	C18orf25 (ENSMICG00000004834) #16	RNF165 (ENSMICG00000011741) #17	LOXHD1 (ENSMICG00000001316) #18	ENSMICG00000017500 #14	ST8SIA5 (ENSMICG00000013224) #19	PIAS2 (ENSMICG00000013229) #20	KATNAL2 (ENSMICG00000007857) #22	HDHD2 (ENSMICG00000042121) #23	IER3IP1 (ENSMICG00000043887) #24	SKOR2 (ENSMICG00000031129) #25	SMAD2 (ENSMICG00000007882) #26	ZBTB7C (ENSMICG00000038331) #27	CTIF (ENSMICG00000010167) #28	SMAD7 (ENSMICG00000034183) #29	DYM (ENSMICG00000017535) #31	C18orf32 (ENSMICG00000042525) #32	ENSMICG00000017102	LIPG (ENSMICG00000017104) #33	ACAA2 (ENSMICG00000005278) #34	MYO5B (ENSMICG00000005287) #35	CFAP53 (ENSMICG00000006410) #36	MBD1 (ENSMICG00000006414) #37
Lemuriformes_a	ANCESTRAL SPECIES	62	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.s #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Coquerels sifaka	MODERN SPECIES	262			SETBP1 (ENSPCOG00000022384) #7	SLC14A2 (ENSPCOG00000003875) #9	SLC14A1 (ENSPCOG00000027560) #10	SIGLEC15 (ENSPCOG00000026160) #11	EPG5 (ENSPCOG00000026516) #12	PSTPIP2 (ENSPCOG00000021273) #13	ATP5F1A (ENSPCOG00000017027) #14	HAUS1 (ENSPCOG00000024124) #15	C18orf25 (ENSPCOG00000026561) #16	RNF165 (ENSPCOG00000017842) #17	LOXHD1 (ENSPCOG00000027350) #18	ST8SIA5 (ENSPCOG00000021186) #19	PIAS2 (ENSPCOG00000028397) #20	KATNAL2 (ENSPCOG00000013440) #22	HDHD2 (ENSPCOG00000024401) #23	IER3IP1 (ENSPCOG00000000443) #24	SKOR2 (ENSPCOG00000016973) #25	SMAD2 (ENSPCOG00000000934) #26	ZBTB7C (ENSPCOG00000019918) #27	CTIF (ENSPCOG00000013391) #28	SMAD7 (ENSPCOG00000003237) #29	DYM (ENSPCOG00000010198) #31	C18orf32 (ENSPCOG00000028796) #32	ENSPCOG00000024759	LIPG (ENSPCOG00000017489) #33	ACAA2 (ENSPCOG00000021233) #34
Greater bamboo lemur	MODERN SPECIES	606														ST8SIA5 (ENSPSMG00000018127) #19	PIAS2 (ENSPSMG00000018197) #20	KATNAL2 (ENSPSMG00000018239) #22	ENSPSMG00000018244 #21	HDHD2 (ENSPSMG00000018254) #23	ENSPSMG00000018261 #24	SKOR2 (ENSPSMG00000018268) #25	SMAD2 (ENSPSMG00000018402) #26	ZBTB7C (ENSPSMG00000018657) #27	CTIF (ENSPSMG00000018691) #28	SMAD7 (ENSPSMG00000018729) #29	DYM (ENSPSMG00000018799) #31	ENSPSMG00000018846 #32	ENSPSMG00000018857	LIPG (ENSPSMG00000018901) #33	ACAA2 (ENSPSMG00000018945) #34	MYO5B (ENSPSMG00000019098) #35	CFAP53 (ENSPSMG00000019120) #36
Bushbaby	MODERN SPECIES	127	SYT4 (ENSOGAG00000003595)	ENSOGAG00000029062	SETBP1 (ENSOGAG00000010412) #7	SLC14A2 (ENSOGAG00000016395) #9	SLC14A1 (ENSOGAG00000016407) #10	SIGLEC15 (ENSOGAG00000024686) #11	ENSOGAG00000029113 #12	PSTPIP2 (ENSOGAG00000007141) #13	ENSOGAG00000026684 #14	HAUS1 (ENSOGAG00000005096) #15	C18orf25 (ENSOGAG00000005093) #16	RNF165 (ENSOGAG00000025147) #17	LOXHD1 (ENSOGAG00000012621) #18	ST8SIA5 (ENSOGAG00000012633) #19	PIAS2 (ENSOGAG00000012636) #20	KATNAL2 (ENSOGAG00000016612) #22	HDHD2 (ENSOGAG00000016619) #23	IER3IP1 (ENSOGAG00000016626) #24	SKOR2 (ENSOGAG00000032696) #25	SMAD2 (ENSOGAG00000000443) #26	ZBTB7C (ENSOGAG00000000444) #27	CTIF (ENSOGAG00000013927) #28	SMAD7 (ENSOGAG00000013932) #29	DYM (ENSOGAG00000013935) #31	ENSOGAG00000029213	LIPG (ENSOGAG00000016524) #33	ACAA2 (ENSOGAG00000016527) #34	MYO5B (ENSOGAG00000016529) #35	ENSOGAG00000003781	MBD1 (ENSOGAG00000003784) #37	CXXC1 (ENSOGAG00000033715)
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Tree shrew	MODERN SPECIES	3486															ENSTBEG00000005779 #21	KATNAL2 (ENSTBEG00000005955) #22	HDHD2 (ENSTBEG00000006418) #23
Glires	ANCESTRAL SPECIES	23	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Rodentia	ANCESTRAL SPECIES	23	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Myomorpha	ANCESTRAL SPECIES	35	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Muroidea	ANCESTRAL SPECIES	13	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a.e #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.u #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Cricetinae	ANCESTRAL SPECIES	14				ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a.e #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.u #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Chinese hamster chok1gshd	MODERN SPECIES	314	Setbp1 (ENSCGRG00001003049) #7	ENSCGRG00001002557	Slc14a2 (ENSCGRG00001015350) #9	Slc14a1 (ENSCGRG00001014682) #10	ENSCGRG00001014534	Siglec15 (ENSCGRG00001014278) #11	Epg5 (ENSCGRG00001013764) #12	Pstpip2 (ENSCGRG00001012933) #13	Atp5a1 (ENSCGRG00001012335) #14	Haus1 (ENSCGRG00001012089) #15	8030462N17Rik (ENSCGRG00001011465) #16	Rnf165 (ENSCGRG00001011050) #17	Loxhd1 (ENSCGRG00001009440) #18	St8sia5 (ENSCGRG00001004611) #19	Pias2 (ENSCGRG00001023617) #20	Katnal2 (ENSCGRG00001010923) #22	Hdhd2 (ENSCGRG00001009445) #23	Skor2 (ENSCGRG00001007925) #25	Smad2 (ENSCGRG00001006348) #26	Zbtb7c (ENSCGRG00001005320) #27
Golden Hamster	MODERN SPECIES	680	Toporsl (ENSMAUG00000021881)	ENSMAUG00000014437	ENSMAUG00000006240	ENSMAUG00000018876 #9	Slc14a1 (ENSMAUG00000014121) #10	Siglec15 (ENSMAUG00000000352) #11	Epg5 (ENSMAUG00000019707) #12	Pstpip2 (ENSMAUG00000014774) #13	Atp5f1a (ENSMAUG00000019838) #14	Haus1 (ENSMAUG00000009723) #15	8030462N17Rik (ENSMAUG00000006561) #16	Rnf165 (ENSMAUG00000017550) #17	Loxhd1 (ENSMAUG00000010353) #18	St8sia5 (ENSMAUG00000011966) #19	Pias2 (ENSMAUG00000014565) #20	Katnal2 (ENSMAUG00000019836) #22	Hdhd2 (ENSMAUG00000019526) #23	ENSMAUG00000012040 #24	Skor2 (ENSMAUG00000016006) #25	Smad2 (ENSMAUG00000006737) #26	Zbtb7c (ENSMAUG00000000374) #27	Ctif (ENSMAUG00000000656) #28	Smad7 (ENSMAUG00000020326) #29	ENSMAUG00000020878	Dym (ENSMAUG00000017721) #31	BC031181 (ENSMAUG00000019483) #32	Rpl17 (ENSMAUG00000015927)	Lipg (ENSMAUG00000000351) #33	Acaa2 (ENSMAUG00000018671) #34	Myo5b (ENSMAUG00000000930) #35	ENSMAUG00000010397
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a.e #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.u #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Northern American deer mouse	MODERN SPECIES	10	ENSPEMG00000006471	Setbp1 (ENSPEMG00000021869) #7	ENSPEMG00000022112 #9	Slc14a1 (ENSPEMG00000008835) #10	ENSPEMG00000028869	Siglec15 (ENSPEMG00000024146) #11	Epg5 (ENSPEMG00000022153) #12	Pstpip2 (ENSPEMG00000022379) #13	Atp5a1 (ENSPEMG00000022004) #14	Haus1 (ENSPEMG00000021388) #15	8030462N17Rik (ENSPEMG00000010341) #16	ENSPEMG00000029031 #17	Loxhd1 (ENSPEMG00000022919) #18	St8sia5 (ENSPEMG00000022119) #19	Pias2 (ENSPEMG00000022220) #20	Katnal2 (ENSPEMG00000021096) #22	Hdhd2 (ENSPEMG00000020912) #23	ENSPEMG00000026193 #24	Skor2 (ENSPEMG00000022190) #25	Smad2 (ENSPEMG00000020383) #26	Zbtb7c (ENSPEMG00000020629) #27	Ctif (ENSPEMG00000022746) #28	Smad7 (ENSPEMG00000021331) #29	Dym (ENSPEMG00000020826) #31	Rpl17 (ENSPEMG00000001520)	Lipg (ENSPEMG00000021868) #33	ENSPEMG00000028900	ENSPEMG00000025726	Acaa2 (ENSPEMG00000022034) #34	Myo5b (ENSPEMG00000020539) #35	Cfap53 (ENSPEMG00000024092)
Prairie vole	MODERN SPECIES	5	ENSMOCG00000019582	Pard6g (ENSMOCG00000019881)	Setbp1 (ENSMOCG00000021557) #7	Slc14a2 (ENSMOCG00000013965) #9	ENSMOCG00000002421 #10	Siglec15 (ENSMOCG00000007709) #11	Epg5 (ENSMOCG00000015567) #12	Pstpip2 (ENSMOCG00000006361) #13	Atp5a1 (ENSMOCG00000009175) #14	Haus1 (ENSMOCG00000011366) #15	8030462N17Rik (ENSMOCG00000000844) #16	ENSMOCG00000019837 #17	Loxhd1 (ENSMOCG00000016732) #18	St8sia5 (ENSMOCG00000011361) #19	Pias2 (ENSMOCG00000015605) #20	Katnal2 (ENSMOCG00000011716) #22	Hdhd2 (ENSMOCG00000008063) #23	ENSMOCG00000009073 #24	Skor2 (ENSMOCG00000018264) #25	Smad2 (ENSMOCG00000017648) #26	Zbtb7c (ENSMOCG00000017640) #27	Ctif (ENSMOCG00000020507) #28	Smad7 (ENSMOCG00000001269) #29	Dym (ENSMOCG00000022593) #31	BC031181 (ENSMOCG00000012446) #32	Rpl17 (ENSMOCG00000012741)	Lipg (ENSMOCG00000020738) #33	Acaa2 (ENSMOCG00000004236) #34	Myo5b (ENSMOCG00000022368) #35	ENSMOCG00000008152	ENSMOCG00000011976 #37
Murinae	ANCESTRAL SPECIES	17	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00940000168426
Mus	ANCESTRAL SPECIES	19	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648.c #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00940000168426
Mus_A	ANCESTRAL SPECIES	19	ENSGT01100000265037	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648.c #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00940000168426
Mus_B	ANCESTRAL SPECIES	19	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648.c #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00940000168426
Mus_C	ANCESTRAL SPECIES	16	ENSGT00950000183211.a.b	ENSGT00940000158784 #7	ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648.c #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Steppe mouse	MODERN SPECIES	3130															ENSMSIG00000018626 #20	Katnal2 (ENSMSIG00000018633) #22	Hdhd2 (ENSMSIG00000018790) #23	ENSMSIG00000018819 #24	Skor2 (ENSMSIG00000018834) #25	Smad2 (ENSMSIG00000018887) #26	ENSMSIG00000018946	Zbtb7c (ENSMSIG00000018967) #27	Ctif (ENSMSIG00000019005) #28	ENSMSIG00000019110	Smad7 (ENSMSIG00000019123) #29	Dym (ENSMSIG00000019180) #31	ENSMSIG00000019247	BC031181 (ENSMSIG00000019259) #32	Rpl17 (ENSMSIG00000019275)	Lipg (ENSMSIG00000019321) #33	ENSMSIG00000019349
spretus	MODERN SPECIES	9	Eola1 (MGP_SPRETEiJ_G0023343)	Setbp1 (MGP_SPRETEiJ_G0023342) #7	MGP_SPRETEiJ_G0023341	Slc14a2 (MGP_SPRETEiJ_G0023340) #9	Slc14a1 (MGP_SPRETEiJ_G0023339) #10	Siglec15 (MGP_SPRETEiJ_G0023338) #11	Epg5 (MGP_SPRETEiJ_G0023337) #12	Pstpip2 (MGP_SPRETEiJ_G0023336) #13	Atp5a1 (MGP_SPRETEiJ_G0023335) #14	Haus1 (MGP_SPRETEiJ_G0023334) #15	8030462N17Rik (MGP_SPRETEiJ_G0023333) #16	Loxhd1 (MGP_SPRETEiJ_G0023331) #18	St8sia5 (MGP_SPRETEiJ_G0023330) #19	MGP_SPRETEiJ_G0023329	Pias2 (MGP_SPRETEiJ_G0023328) #20	Katnal2 (MGP_SPRETEiJ_G0023327) #22	Hdhd2 (MGP_SPRETEiJ_G0023326) #23	MGP_SPRETEiJ_G0023325 #24	Skor2 (MGP_SPRETEiJ_G0023324) #25	Smad2 (MGP_SPRETEiJ_G0023323) #26	Zbtb7c (MGP_SPRETEiJ_G0023322) #27	Ctif (MGP_SPRETEiJ_G0023321) #28	Smad7 (MGP_SPRETEiJ_G0023320) #29	Dym (MGP_SPRETEiJ_G0023319) #31	BC031181 (MGP_SPRETEiJ_G0023318) #32	MGP_SPRETEiJ_G0023317	Lipg (MGP_SPRETEiJ_G0023316) #33	Acaa2 (MGP_SPRETEiJ_G0023315) #34	Myo5b (MGP_SPRETEiJ_G0023314) #35	Cfap53 (MGP_SPRETEiJ_G0023313)	Cxxc1 (MGP_SPRETEiJ_G0023312)
Mouse	MODERN SPECIES	9	Pard6g (ENSMUSG00000056214)	Setbp1 (ENSMUSG00000024548) #7	Gm6133 (ENSMUSG00000090451)	Slc14a2 (ENSMUSG00000024552) #9	Slc14a1 (ENSMUSG00000059336) #10	Siglec15 (ENSMUSG00000091055) #11	Epg5 (ENSMUSG00000039840) #12	Pstpip2 (ENSMUSG00000025429) #13	Atp5a1 (ENSMUSG00000025428) #14	Haus1 (ENSMUSG00000041840) #15	8030462N17Rik (ENSMUSG00000047466) #16	Rnf165 (ENSMUSG00000025427) #17	Loxhd1 (ENSMUSG00000032818) #18	St8sia5 (ENSMUSG00000025425) #19	Pias2 (ENSMUSG00000025423) #20	Katnal2 (ENSMUSG00000025420) #22	Hdhd2 (ENSMUSG00000025421) #23	Ier3ip1 (ENSMUSG00000090000)	Skor2 (ENSMUSG00000091519) #25	Smad2 (ENSMUSG00000024563) #26	Zbtb7c (ENSMUSG00000044646) #27	Ctif (ENSMUSG00000052928) #28	Smad7 (ENSMUSG00000025880) #29	Dym (ENSMUSG00000035765) #31	BC031181 (ENSMUSG00000036299) #32	Rpl17 (ENSMUSG00000062328)	Lipg (ENSMUSG00000053846) #33	Acaa2 (ENSMUSG00000036880) #34	Myo5b (ENSMUSG00000025885) #35	Cfap53 (ENSMUSG00000035394)	Mbd1 (ENSMUSG00000024561) #37
Ryukyu mouse	MODERN SPECIES	9	Setbp1 (MGP_CAROLIEiJ_G0022429) #7	MGP_CAROLIEiJ_G0022428	Slc14a2 (MGP_CAROLIEiJ_G0022427) #9	Slc14a1 (MGP_CAROLIEiJ_G0022426) #10	Siglec15 (MGP_CAROLIEiJ_G0022425) #11	MGP_CAROLIEiJ_G0022424 #12	Pstpip2 (MGP_CAROLIEiJ_G0022423) #13	Atp5a1 (MGP_CAROLIEiJ_G0022422) #14	Haus1 (MGP_CAROLIEiJ_G0022421) #15	8030462N17Rik (MGP_CAROLIEiJ_G0022420) #16	Rnf165 (MGP_CAROLIEiJ_G0022419) #17	Loxhd1 (MGP_CAROLIEiJ_G0022418) #18	St8sia5 (MGP_CAROLIEiJ_G0022417) #19	MGP_CAROLIEiJ_G0022416	Pias2 (MGP_CAROLIEiJ_G0022415) #20	Katnal2 (MGP_CAROLIEiJ_G0022414) #22	Hdhd2 (MGP_CAROLIEiJ_G0022413) #23	MGP_CAROLIEiJ_G0022412 #24	Skor2 (MGP_CAROLIEiJ_G0022411) #25	Smad2 (MGP_CAROLIEiJ_G0022410) #26	Zbtb7c (MGP_CAROLIEiJ_G0022409) #27	Ctif (MGP_CAROLIEiJ_G0022408) #28	Smad7 (MGP_CAROLIEiJ_G0022407) #29	Dym (MGP_CAROLIEiJ_G0022406) #31	BC031181 (MGP_CAROLIEiJ_G0022405) #32	Rpl17 (MGP_CAROLIEiJ_G0022404)	Lipg (MGP_CAROLIEiJ_G0022403) #33	Acaa2 (MGP_CAROLIEiJ_G0022402) #34	Myo5b (MGP_CAROLIEiJ_G0022401) #35	Cfap53 (MGP_CAROLIEiJ_G0022400)	Cxxc1 (MGP_CAROLIEiJ_G0022399)
Shrew mouse	MODERN SPECIES	6	Setbp1 (MGP_PahariEiJ_G0019158) #7	MGP_PahariEiJ_G0019157	Slc14a2 (MGP_PahariEiJ_G0019156) #9	Slc14a1 (MGP_PahariEiJ_G0019155) #10	Siglec15 (MGP_PahariEiJ_G0019154) #11	Epg5 (MGP_PahariEiJ_G0019153) #12	Pstpip2 (MGP_PahariEiJ_G0019152) #13	Atp5a1 (MGP_PahariEiJ_G0019151) #14	Haus1 (MGP_PahariEiJ_G0019150) #15	8030462N17Rik (MGP_PahariEiJ_G0019149) #16	Rnf165 (MGP_PahariEiJ_G0019148) #17	MGP_PahariEiJ_G0019147 #18	St8sia5 (MGP_PahariEiJ_G0019146) #19	MGP_PahariEiJ_G0019145	Pias2 (MGP_PahariEiJ_G0019144) #20	Katnal2 (MGP_PahariEiJ_G0019143) #22	Hdhd2 (MGP_PahariEiJ_G0019142) #23	MGP_PahariEiJ_G0019141 #24	Skor2 (MGP_PahariEiJ_G0019140) #25	Smad2 (MGP_PahariEiJ_G0019139) #26	Zbtb7c (MGP_PahariEiJ_G0019138) #27	Ctif (MGP_PahariEiJ_G0019137) #28	Smad7 (MGP_PahariEiJ_G0019136) #29	Dym (MGP_PahariEiJ_G0019135) #31	BC031181 (MGP_PahariEiJ_G0019134) #32	Rpl17 (MGP_PahariEiJ_G0019133)	Lipg (MGP_PahariEiJ_G0019132) #33	Acaa2 (MGP_PahariEiJ_G0019131) #34	Myo5b (MGP_PahariEiJ_G0019130) #35	Cfap53 (MGP_PahariEiJ_G0019129)	MGP_PahariEiJ_G0019128 #37
Rat	MODERN SPECIES	9	ENSRNOG00000065450	Setbp1 (ENSRNOG00000016208) #7	Slc14a2 (ENSRNOG00000061714) #9	Slc14a1 (ENSRNOG00000016753) #10	Siglec15 (ENSRNOG00000033588) #11	Epg5 (ENSRNOG00000052894) #12	Pstpip2 (ENSRNOG00000016987) #13	Atp5f1a (ENSRNOG00000017032) #14	Haus1 (ENSRNOG00000017067) #15	ENSRNOG00000063575	RGD1308601 (ENSRNOG00000017215) #16	Rnf165 (ENSRNOG00000048824) #17	Loxhd1 (ENSRNOG00000017410) #18	St8sia5 (ENSRNOG00000022691) #19	Pias2 (ENSRNOG00000017493) #20	Katnal2 (ENSRNOG00000017788) #22	Ier3ip1 (ENSRNOG00000043171) #23	Skor2 (ENSRNOG00000018006) #25	Smad2 (ENSRNOG00000018140) #26	Zbtb7c (ENSRNOG00000047924) #27	ENSRNOG00000067472	Ctif (ENSRNOG00000018342) #28	Smad7 (ENSRNOG00000018359) #29	Dym (ENSRNOG00000018425) #31	Rpl17 (ENSRNOG00000018680)	Slc25a6 (ENSRNOG00000042387)	Lipg (ENSRNOG00000018694) #33	Acaa2 (ENSRNOG00000013766) #34	Myo5b (ENSRNOG00000014104) #35	Mbd1 (ENSRNOG00000024104) #37	Cfap53 (ENSRNOG00000014585)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1888	Mc5r (ENSNGAG00000008073)	Mc2r (ENSNGAG00000014364)	Setbp1 (ENSNGAG00000016368) #7	ENSNGAG00000015050 #9	Slc14a1 (ENSNGAG00000014056) #10	Siglec15 (ENSNGAG00000013867) #11	Epg5 (ENSNGAG00000005612) #12	Pstpip2 (ENSNGAG00000018122) #13	Atp5a1 (ENSNGAG00000009807) #14	Haus1 (ENSNGAG00000001553) #15	8030462N17Rik (ENSNGAG00000014428) #16	Rnf165 (ENSNGAG00000012965) #17	Loxhd1 (ENSNGAG00000020158) #18	St8sia5 (ENSNGAG00000017269) #19	Pias2 (ENSNGAG00000010511) #20	Katnal2 (ENSNGAG00000010954) #22	Hdhd2 (ENSNGAG00000000250) #23	ENSNGAG00000020722 #24	Skor2 (ENSNGAG00000018430) #25	Smad2 (ENSNGAG00000013343) #26	Zbtb7c (ENSNGAG00000012022) #27	Ctif (ENSNGAG00000011452) #28	Smad7 (ENSNGAG00000004962) #29	ENSNGAG00000001549	Dym (ENSNGAG00000020852) #31
Lesser Egyptian jerboa	MODERN SPECIES	60	Mc2r (ENSJJAG00000000906)	ENSJJAG00000000736	Setbp1 (ENSJJAG00000004320) #7	ENSJJAG00000021572 #9	Slc14a1 (ENSJJAG00000009670) #10	Siglec15 (ENSJJAG00000011775) #11	Epg5 (ENSJJAG00000008036) #12	Pstpip2 (ENSJJAG00000011600) #13	ENSJJAG00000022136 #14	ENSJJAG00000014908 #15	8030462N17Rik (ENSJJAG00000015948) #16	Rnf165 (ENSJJAG00000014596) #17	Loxhd1 (ENSJJAG00000012049) #18	St8sia5 (ENSJJAG00000023613) #19	ENSJJAG00000021561 #20	Katnal2 (ENSJJAG00000013360) #22	Hdhd2 (ENSJJAG00000020515) #23	ENSJJAG00000009768 #24	Skor2 (ENSJJAG00000013235) #25	Smad2 (ENSJJAG00000021902) #26	ENSJJAG00000000783	Zbtb7c (ENSJJAG00000005484) #27	ENSJJAG00000000639	Ctif (ENSJJAG00000013706) #28	Smad7 (ENSJJAG00000017342) #29	ENSJJAG00000011224	ENSJJAG00000014372	ENSJJAG00000011899	Dym (ENSJJAG00000000543) #31	BC031181 (ENSJJAG00000013965) #32	ENSJJAG00000017312
Kangaroo rat	MODERN SPECIES	362																Katnal2 (ENSDORG00000005500) #22	Hdhd2 (ENSDORG00000012417) #23	ENSDORG00000027748 #24	Skor2 (ENSDORG00000012420) #25	Smad2 (ENSDORG00000013015) #26	Zbtb7c (ENSDORG00000002188) #27	Ctif (ENSDORG00000003221) #28	Smad7 (ENSDORG00000001837) #29	Dym (ENSDORG00000029874) #31	BC031181 (ENSDORG00000000327) #32	ENSDORG00000026216	Lipg (ENSDORG00000015147) #33	Acaa2 (ENSDORG00000012365) #34	Myo5b (ENSDORG00000013047) #35	ENSDORG00000013915 #36	Mbd1 (ENSDORG00000013917) #37
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029.q #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029.p #15	ENSGT00390000006029.q #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Guinea pig	MODERN SPECIES	14	ENSCPOG00000040621	PIK3C3 (ENSCPOG00000004375)	RIT2 (ENSCPOG00000009357)	SYT4 (ENSCPOG00000009941)	SETBP1 (ENSCPOG00000011164) #7	ENSCPOG00000007976 #9	SLC14A1 (ENSCPOG00000007979) #10	EPG5 (ENSCPOG00000012114) #12	PSTPIP2 (ENSCPOG00000004876) #13	ATP5F1A (ENSCPOG00000012719) #14	HAUS1 (ENSCPOG00000012723) #15	RNF165 (ENSCPOG00000009298) #17	LOXHD1 (ENSCPOG00000009824) #18	ST8SIA5 (ENSCPOG00000030161) #19	ENSCPOG00000003067 #20	KATNAL2 (ENSCPOG00000008150) #22	HDHD2 (ENSCPOG00000030325) #23	IER3IP1 (ENSCPOG00000040200) #24	SKOR2 (ENSCPOG00000021920) #25	SMAD2 (ENSCPOG00000013398) #26	ZBTB7C (ENSCPOG00000040464) #27	CTIF (ENSCPOG00000001049) #28	SMAD7 (ENSCPOG00000030295) #29	DYM (ENSCPOG00000013484) #31	C18orf32 (ENSCPOG00000034745) #32	ENSCPOG00000019337	LIPG (ENSCPOG00000008890) #33	ACAA2 (ENSCPOG00000004734) #34	MYO5B (ENSCPOG00000014213) #35	CFAP53 (ENSCPOG00000001668) #36	MBD1 (ENSCPOG00000001671) #37
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029.q #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Long-tailed chinchilla	MODERN SPECIES	109	ENSCLAG00000008619	SETBP1 (ENSCLAG00000010509) #7	SLC14A2 (ENSCLAG00000012015) #9	SLC14A1 (ENSCLAG00000007299) #10	SIGLEC15 (ENSCLAG00000007394) #11	EPG5 (ENSCLAG00000009230) #12	PSTPIP2 (ENSCLAG00000011006) #13	ENSCLAG00000015055	ATP5F1A (ENSCLAG00000014431) #14	HAUS1 (ENSCLAG00000012155) #15	C18orf25 (ENSCLAG00000008611) #16	RNF165 (ENSCLAG00000009534) #17	LOXHD1 (ENSCLAG00000011718) #18	ST8SIA5 (ENSCLAG00000012639) #19	ENSCLAG00000011621 #20	KATNAL2 (ENSCLAG00000013657) #22	HDHD2 (ENSCLAG00000006391) #23	IER3IP1 (ENSCLAG00000007652) #24	SKOR2 (ENSCLAG00000012544) #25	SMAD2 (ENSCLAG00000011258) #26	ZBTB7C (ENSCLAG00000012082) #27	CTIF (ENSCLAG00000008174) #28	SMAD7 (ENSCLAG00000007063) #29	DYM (ENSCLAG00000008080) #31	C18orf32 (ENSCLAG00000008711) #32	ENSCLAG00000008914	ENSCLAG00000010369	LIPG (ENSCLAG00000011863) #33	ENSCLAG00000007196	ENSCLAG00000008597	ACAA2 (ENSCLAG00000008998) #34
Degu	MODERN SPECIES	44	SIGLEC15 (ENSODEG00000018459) #11	EPG5 (ENSODEG00000018404) #12	PSTPIP2 (ENSODEG00000018461) #13	ENSODEG00000018334	ENSODEG00000020534	ATP5F1A (ENSODEG00000018359) #14	ENSODEG00000018366 #15	C18orf25 (ENSODEG00000018458) #16	RNF165 (ENSODEG00000018412) #17	LOXHD1 (ENSODEG00000018482) #18	ENSODEG00000020498	ST8SIA5 (ENSODEG00000018352) #19	ENSODEG00000018432 #20	ENSODEG00000020536	ENSODEG00000018457	KATNAL2 (ENSODEG00000018481) #22	HDHD2 (ENSODEG00000018388) #23	IER3IP1 (ENSODEG00000018375) #24	SKOR2 (ENSODEG00000018363) #25	ENSODEG00000018367	ENSODEG00000018340	ENSODEG00000018377	SMAD2 (ENSODEG00000018373) #26	ZBTB7C (ENSODEG00000018417) #27	CTIF (ENSODEG00000018390) #28	SMAD7 (ENSODEG00000018424) #29	DYM (ENSODEG00000018486) #31	ENSODEG00000018393	ENSODEG00000018365	ENSODEG00000018460	ENSODEG00000020491
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000040364 #7	ENSHGLG00000033588	ENSHGLG00000046959 #9	ENSHGLG00000005880 #9	SLC14A1 (ENSHGLG00000007316) #10	PSTPIP2 (ENSHGLG00000005740) #13	ENSHGLG00000009522 #14	ENSHGLG00000036850 #15	ENSHGLG00000036445 #14	C18orf25 (ENSHGLG00000041108) #16	RNF165 (ENSHGLG00000035767) #17	ENSHGLG00000006211 #18	ST8SIA5 (ENSHGLG00000040367) #19	PIAS2 (ENSHGLG00000015588) #20	ENSHGLG00000040167	ENSHGLG00000034217 #22	HDHD2 (ENSHGLG00000010130) #23	ENSHGLG00000048898 #24	SKOR2 (ENSHGLG00000035792) #25	SMAD2 (ENSHGLG00000008711) #26	ENSHGLG00000031912	ENSHGLG00000042101 #29	ENSHGLG00000048272	ENSHGLG00000040505	ENSHGLG00000015030 #31	ENSHGLG00000009081 #32	ENSHGLG00000036153	ENSHGLG00000047452	LIPG (ENSHGLG00000010224) #33	ENSHGLG00000006292	ENSHGLG00000038847
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.z #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Marmotini	ANCESTRAL SPECIES	31	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.z #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT01030000236530	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Marmotini_b	ANCESTRAL SPECIES	307																ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25
Arctic ground squirrel	MODERN SPECIES	837																KATNAL2 (ENSUPAG00010002731) #22	ENSUPAG00010002721 #24	HDHD2 (ENSUPAG00010002679) #23	SKOR2 (ENSUPAG00010002670) #25
Squirrel	MODERN SPECIES	558																KATNAL2 (ENSSTOG00000013527) #22	HDHD2 (ENSSTOG00000008527) #23	SKOR2 (ENSSTOG00000021346) #25
Alpin marmot	MODERN SPECIES	10	RIT2 (ENSMMMG00000007046)	SYT4 (ENSMMMG00000007022)	SETBP1 (ENSMMMG00000006996) #7	SLC14A2 (ENSMMMG00000006939) #9	SLC14A1 (ENSMMMG00000006914) #10	SIGLEC15 (ENSMMMG00000006905) #11	EPG5 (ENSMMMG00000006854) #12	PSTPIP2 (ENSMMMG00000006839) #13	ATP5F1A (ENSMMMG00000006823) #14	HAUS1 (ENSMMMG00000006810) #15	C18orf25 (ENSMMMG00000006777) #16	RNF165 (ENSMMMG00000006757) #17	LOXHD1 (ENSMMMG00000006669) #18	ST8SIA5 (ENSMMMG00000006633) #19	PIAS2 (ENSMMMG00000006515) #20	KATNAL2 (ENSMMMG00000006351) #22	HDHD2 (ENSMMMG00000006342) #23	ENSMMMG00000006338	SMAD2 (ENSMMMG00000006290) #26	ZBTB7C (ENSMMMG00000006278) #27	CTIF (ENSMMMG00000006232) #28	SMAD7 (ENSMMMG00000006202) #29	DYM (ENSMMMG00000006170) #31	C18orf32 (ENSMMMG00000006157) #32	ENSMMMG00000006135	LIPG (ENSMMMG00000006111) #33	ACAA2 (ENSMMMG00000006091) #34	MYO5B (ENSMMMG00000005915) #35	CFAP53 (ENSMMMG00000005890) #36	MBD1 (ENSMMMG00000005802) #37	CXXC1 (ENSMMMG00000005766)
Eurasian red squirrel	MODERN SPECIES	4	ENSSVLG00005015263	SETBP1 (ENSSVLG00005015356) #7	ENSSVLG00005015418 #9	SLC14A1 (ENSSVLG00005015590) #10	SIGLEC15 (ENSSVLG00005015863) #11	EPG5 (ENSSVLG00005015968) #12	PSTPIP2 (ENSSVLG00005016011) #13	ENSSVLG00005016239	ATP5F1A (ENSSVLG00005016277) #14	HAUS1 (ENSSVLG00005016339) #15	C18orf25 (ENSSVLG00005016394) #16	RNF165 (ENSSVLG00005016476) #17	LOXHD1 (ENSSVLG00005016724) #18	ST8SIA5 (ENSSVLG00005018346) #19	ENSSVLG00005018588 #20	KATNAL2 (ENSSVLG00005018737) #22	ENSSVLG00005019019 #21	HDHD2 (ENSSVLG00005019073) #23	ENSSVLG00005019150 #24	SKOR2 (ENSSVLG00005019180) #25	ENSSVLG00005019379 #26	ZBTB7C (ENSSVLG00005019433) #27	CTIF (ENSSVLG00005019619) #28	SMAD7 (ENSSVLG00005019787) #29	DYM (ENSSVLG00005019977) #31	ENSSVLG00005020326 #32	ENSSVLG00005020364	LIPG (ENSSVLG00005020493) #33	ACAA2 (ENSSVLG00005020577) #34	MYO5B (ENSSVLG00005020740) #35	CFAP53 (ENSSVLG00005021141) #36
Lagomorpha	ANCESTRAL SPECIES	29	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.a.a.a.b.k	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000265446	ENSGT00950000183005.a.a #37
Pika	MODERN SPECIES	7239																KATNAL2 (ENSOPRG00000012822) #22	IER3IP1 (ENSOPRG00000012860) #24	ENSOPRG00000018601 #25
Rabbit	MODERN SPECIES	20	PIK3C3 (ENSOCUG00000009451)	RIT2 (ENSOCUG00000003652)	SYT4 (ENSOCUG00000009669)	SETBP1 (ENSOCUG00000009706) #7	ENSOCUG00000006749 #9	SLC14A1 (ENSOCUG00000006758) #10	SIGLEC15 (ENSOCUG00000023340) #11	EPG5 (ENSOCUG00000003950) #12	PSTPIP2 (ENSOCUG00000000324) #13	ENSOCUG00000003967 #14	HAUS1 (ENSOCUG00000017483) #15	C18orf25 (ENSOCUG00000009573) #16	RNF165 (ENSOCUG00000011801) #17	ENSOCUG00000033989 #18	PIAS2 (ENSOCUG00000006900) #20	KATNAL2 (ENSOCUG00000006971) #22	ENSOCUG00000006940 #21	ENSOCUG00000035984 #21	HDHD2 (ENSOCUG00000006979) #23	IER3IP1 (ENSOCUG00000012555) #24	ENSOCUG00000027573 #25	SMAD2 (ENSOCUG00000011290) #26	ZBTB7C (ENSOCUG00000022348) #27	ENSOCUG00000026631	CTIF (ENSOCUG00000024842) #28	SMAD7 (ENSOCUG00000024309) #29	DYM (ENSOCUG00000015851) #31	ENSOCUG00000038051	ENSOCUG00000027094 #32	ENSOCUG00000012485	LIPG (ENSOCUG00000013471) #33
Laurasiatheria	ANCESTRAL SPECIES	23	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Suina	ANCESTRAL SPECIES	12			ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Pig	MODERN SPECIES		ENSSSCG00000008882	SETBP1 (ENSSSCG00000004490) #7	ENSSSCG00000045948	ENSSSCG00000004491 #9	SLC14A1 (ENSSSCG00000004492) #10	SIGLEC15 (ENSSSCG00000004493) #11	EPG5 (ENSSSCG00000021072) #12	PSTPIP2 (ENSSSCG00000060601) #13	ATP5F1A (ENSSSCG00000004499) #14	HAUS1 (ENSSSCG00000004498) #15	C18orf25 (ENSSSCG00000004500) #16	RNF165 (ENSSSCG00000004502) #17	LOXHD1 (ENSSSCG00000004503) #18	ST8SIA5 (ENSSSCG00000032053) #19	PIAS2 (ENSSSCG00000034730) #20	KATNAL2 (ENSSSCG00000022643) #22	HDHD2 (ENSSSCG00000005771) #23	IER3IP1 (ENSSSCG00000060420) #24	ENSSSCG00000039669	SKOR2 (ENSSSCG00000005767) #25	SMAD2 (ENSSSCG00000004505) #26	ZBTB7C (ENSSSCG00000028076) #27	CTIF (ENSSSCG00000004506) #28	SMAD7 (ENSSSCG00000004507) #29	DYM (ENSSSCG00000004508) #31	C18orf32 (ENSSSCG00000034415) #32	ENSSSCG00000035007	LIPG (ENSSSCG00000004509) #33	ACAA2 (ENSSSCG00000004510) #34	MYO5B (ENSSSCG00000004511) #35	ENSSSCG00000049462
Chacoan peccary	MODERN SPECIES	124														ENSCWAG00000009195	PIAS2 (ENSCWAG00000009072) #20	KATNAL2 (ENSCWAG00000008820) #22	HDHD2 (ENSCWAG00000008775) #23	IER3IP1 (ENSCWAG00000008743) #24	SKOR2 (ENSCWAG00000008664) #25
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00940000156943	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Cetacea	ANCESTRAL SPECIES	11	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT01000000220806	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT01000000220806	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.k #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT01000000220806	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.k #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT01000000220806	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.k #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Monodontidae	ANCESTRAL SPECIES	8	ENSGT00950000183064.b.d	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT01000000220806	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00390000008808.k.a.a	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.k #32	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394 #33	ENSGT00940000169764	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Narwhal	MODERN SPECIES	295	ENSMMNG00015003095	SETBP1 (ENSMMNG00015003067) #7	SLC14A2 (ENSMMNG00015002988) #9	SLC14A1 (ENSMMNG00015002937) #10	SIGLEC15 (ENSMMNG00015002905) #11	EPG5 (ENSMMNG00015002843) #12	PSTPIP2 (ENSMMNG00015002786) #13	ATP5F1A (ENSMMNG00015002755) #14	HAUS1 (ENSMMNG00015002726) #15	C18orf25 (ENSMMNG00015002704) #16	RNF165 (ENSMMNG00015002686) #17	LOXHD1 (ENSMMNG00015002006) #18	ST8SIA5 (ENSMMNG00015001685) #19	PIAS2 (ENSMMNG00015001607) #20	ENSMMNG00015001565	KATNAL2 (ENSMMNG00015001513) #22	HDHD2 (ENSMMNG00015001468) #23	ENSMMNG00015001451 #24	SKOR2 (ENSMMNG00015001428) #25	SMAD2 (ENSMMNG00015001331) #26	ZBTB7C (ENSMMNG00015001274) #27	CTIF (ENSMMNG00015001193) #28	ENSMMNG00015001156	SMAD7 (ENSMMNG00015001136) #29	ENSMMNG00015001110	DYM (ENSMMNG00015001014) #31	ENSMMNG00015000947 #32	ENSMMNG00015000862	LIPG (ENSMMNG00015000826) #33	ENSMMNG00015000802	ACAA2 (ENSMMNG00015000776) #34
Beluga whale	MODERN SPECIES	85	ENSDLEG00000018895	SETBP1 (ENSDLEG00000018888) #7	SLC14A2 (ENSDLEG00000018851) #9	SLC14A1 (ENSDLEG00000018837) #10	SIGLEC15 (ENSDLEG00000018831) #11	EPG5 (ENSDLEG00000018365) #12	PSTPIP2 (ENSDLEG00000018281) #13	ATP5A1 (ENSDLEG00000018272) #14	HAUS1 (ENSDLEG00000018258) #15	CUNH18orf25 (ENSDLEG00000018251) #16	RNF165 (ENSDLEG00000018238) #17	LOXHD1 (ENSDLEG00000018163) #18	ST8SIA5 (ENSDLEG00000018143) #19	PIAS2 (ENSDLEG00000018124) #20	ENSDLEG00000018112	KATNAL2 (ENSDLEG00000017942) #22	HDHD2 (ENSDLEG00000017914) #23	ENSDLEG00000017903	SKOR2 (ENSDLEG00000017834) #25
Vaquita	MODERN SPECIES	5	ENSPSNG00000015482	SETBP1 (ENSPSNG00000015348) #7	SLC14A2 (ENSPSNG00000015077) #9	SLC14A1 (ENSPSNG00000014661) #10	SIGLEC15 (ENSPSNG00000014516) #11	EPG5 (ENSPSNG00000014417) #12	PSTPIP2 (ENSPSNG00000014312) #13	ATP5F1A (ENSPSNG00000014199) #14	HAUS1 (ENSPSNG00000014089) #15	C18orf25 (ENSPSNG00000013977) #16	RNF165 (ENSPSNG00000013772) #17	LOXHD1 (ENSPSNG00000011419) #18	ST8SIA5 (ENSPSNG00000010902) #19	PIAS2 (ENSPSNG00000010743) #20	ENSPSNG00000010683	KATNAL2 (ENSPSNG00000010440) #22	HDHD2 (ENSPSNG00000010382) #23	IER3IP1 (ENSPSNG00000010315) #24	SKOR2 (ENSPSNG00000010229) #25	SMAD2 (ENSPSNG00000009901) #26	ZBTB7C (ENSPSNG00000009825) #27	CTIF (ENSPSNG00000009732) #28	ENSPSNG00000009707	ENSPSNG00000009632 #29	DYM (ENSPSNG00000009515) #31	ENSPSNG00000009445 #32	ENSPSNG00000009327	LIPG (ENSPSNG00000009216) #33	ACAA2 (ENSPSNG00000009112) #34	ENSPSNG00000009066	MYO5B (ENSPSNG00000008965) #35
Dolphin	MODERN SPECIES	1680															ENSTTRG00000001016 #21	KATNAL2 (ENSTTRG00000001017) #22	HDHD2 (ENSTTRG00000001018) #23	IER3IP1 (ENSTTRG00000001019) #24
Sperm whale	MODERN SPECIES	10	SETBP1 (ENSPCTG00005007777) #7	SLC14A2 (ENSPCTG00005007803) #9	SLC14A1 (ENSPCTG00005007875) #10	SIGLEC15 (ENSPCTG00005008000) #11	EPG5 (ENSPCTG00005008044) #12	PSTPIP2 (ENSPCTG00005008088) #13	ATP5F1A (ENSPCTG00005008127) #14	HAUS1 (ENSPCTG00005008172) #15	C19H18orf25 (ENSPCTG00005008306) #16	RNF165 (ENSPCTG00005008364) #17	ENSPCTG00005008447 #18	ST8SIA5 (ENSPCTG00005008579) #19	ENSPCTG00005008636 #18	PIAS2 (ENSPCTG00005008808) #20	ENSPCTG00005008984	KATNAL2 (ENSPCTG00005009038) #22	HDHD2 (ENSPCTG00005009305) #23	IER3IP1 (ENSPCTG00005009339) #24	SKOR2 (ENSPCTG00005009374) #25	SMAD2 (ENSPCTG00005009494) #26	ZBTB7C (ENSPCTG00005009728) #27	CTIF (ENSPCTG00005009802) #28	DYM (ENSPCTG00005009929) #31	ENSPCTG00005010201 #32	ENSPCTG00005010250	LIPG (ENSPCTG00005010413) #33	ACAA2 (ENSPCTG00005010500) #34	ENSPCTG00005010644 #35	ENSPCTG00005010783 #35	CFAP53 (ENSPCTG00005012030) #36	MBD1 (ENSPCTG00005012098) #37
Blue whale	MODERN SPECIES	5	SETBP1 (ENSBMSG00010020281) #7	SLC14A2 (ENSBMSG00010020311) #9	SLC14A1 (ENSBMSG00010020365) #10	SIGLEC15 (ENSBMSG00010020448) #11	EPG5 (ENSBMSG00010020473) #12	PSTPIP2 (ENSBMSG00010020499) #13	ENSBMSG00010020513	ATP5F1A (ENSBMSG00010020528) #14	HAUS1 (ENSBMSG00010020557) #15	C18orf25 (ENSBMSG00010020596) #16	RNF165 (ENSBMSG00010020628) #17	LOXHD1 (ENSBMSG00010020792) #18	ST8SIA5 (ENSBMSG00010021215) #19	PIAS2 (ENSBMSG00010021288) #20	ENSBMSG00010021325	KATNAL2 (ENSBMSG00010021337) #22	ENSBMSG00010021354 #21	HDHD2 (ENSBMSG00010021363) #23	IER3IP1 (ENSBMSG00010021374) #24	ENSBMSG00010021377	SKOR2 (ENSBMSG00010021387) #25	SMAD2 (ENSBMSG00010021413) #26	ZBTB7C (ENSBMSG00010021442) #27	CTIF (ENSBMSG00010021461) #28	SMAD7 (ENSBMSG00010021494) #29	DYM (ENSBMSG00010021517) #31	C18orf32 (ENSBMSG00010021530) #32	ENSBMSG00010021535	LIPG (ENSBMSG00010021562) #33	ACAA2 (ENSBMSG00010021576) #34	MYO5B (ENSBMSG00010009537) #35
Pecora	ANCESTRAL SPECIES	26	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Yarkand deer	MODERN SPECIES	19	SETBP1 (ENSCHYG00000015524) #7	SLC14A2 (ENSCHYG00000015148) #9	SLC14A1 (ENSCHYG00000014960) #10	SIGLEC15 (ENSCHYG00000014853) #11	EPG5 (ENSCHYG00000014653) #12	ENSCHYG00000014621	PSTPIP2 (ENSCHYG00000014255) #13	ATP5F1A (ENSCHYG00000014052) #14	HAUS1 (ENSCHYG00000013860) #15	ENSCHYG00000013803	ENSCHYG00000013406 #16	LOXHD1 (ENSCHYG00000011324) #18	ST8SIA5 (ENSCHYG00000011028) #19	ENSCHYG00000010966	PIAS2 (ENSCHYG00000010761) #20	KATNAL2 (ENSCHYG00000010401) #22	HDHD2 (ENSCHYG00000010250) #23	ENSCHYG00000010350 #24	ENSCHYG00000010193 #25	SMAD2 (ENSCHYG00000010054) #26	ENSCHYG00000010021	ZBTB7C (ENSCHYG00000009960) #27	ENSCHYG00000026884	CTIF (ENSCHYG00000026870) #28	SMAD7 (ENSCHYG00000026860) #29	DYM (ENSCHYG00000026793) #31	C18orf32 (ENSCHYG00000026758) #32	ENSCHYG00000026734	LIPG (ENSCHYG00000026718) #33	ACAA2 (ENSCHYG00000026661) #34	MYO5B (ENSCHYG00000026574) #35
Percora_a	ANCESTRAL SPECIES	28	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.ab #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Bovidae	ANCESTRAL SPECIES	28	ENSGT01030000234510.a.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788 #13	ENSGT00550000074846.ab #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Caprinae	ANCESTRAL SPECIES	25	ENSGT01030000234510.a.a.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788 #13	ENSGT00550000074846.ab.a #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.m #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Rambouillet Sheep	MODERN SPECIES	15	ENSOARG00020024696	SETBP1 (ENSOARG00020024713) #7	SLC14A2 (ENSOARG00020024734) #9	SLC14A1 (ENSOARG00020024788) #10	SIGLEC15 (ENSOARG00020024818) #11	EPG5 (ENSOARG00020024844) #12	ENSOARG00020024920	PSTPIP2 (ENSOARG00020024936) #13	ATP5F1A (ENSOARG00020025008) #14	HAUS1 (ENSOARG00020025030) #15	C18orf25 (ENSOARG00020025062) #16	RNF165 (ENSOARG00020006346) #17	LOXHD1 (ENSOARG00020006581) #18	ST8SIA5 (ENSOARG00020009312) #19	PIAS2 (ENSOARG00020009642) #20	KATNAL2 (ENSOARG00020009912) #22	ENSOARG00020010055 #21	HDHD2 (ENSOARG00020010165) #23	IER3IP1 (ENSOARG00020010237) #24	SKOR2 (ENSOARG00020010308) #25	SMAD2 (ENSOARG00020010458) #26	ZBTB7C (ENSOARG00020010706) #27	CTIF (ENSOARG00020010822) #28	SMAD7 (ENSOARG00020010974) #29	DYM (ENSOARG00020011069) #31	ENSOARG00020011257	C18orf32 (ENSOARG00020011289) #32	RPL17 (ENSOARG00020011339)	LIPG (ENSOARG00020011622) #33	ACAA2 (ENSOARG00020011796) #34	MYO5B (ENSOARG00020012171) #35
Goat	MODERN SPECIES	16	MC5R (ENSCHIG00000019609)	MC2R (ENSCHIG00000006175)	SETBP1 (ENSCHIG00000014366) #7	SLC14A2 (ENSCHIG00000023270) #9	SLC14A1 (ENSCHIG00000006085) #10	SIGLEC15 (ENSCHIG00000008764) #11	EPG5 (ENSCHIG00000003358) #12	PSTPIP2 (ENSCHIG00000019291) #13	ENSCHIG00000014708 #14	HAUS1 (ENSCHIG00000027208) #15	C18orf25 (ENSCHIG00000014294) #16	RNF165 (ENSCHIG00000009622) #17	LOXHD1 (ENSCHIG00000019780) #18	ST8SIA5 (ENSCHIG00000021775) #19	ENSCHIG00000014561 #20	KATNAL2 (ENSCHIG00000021217) #22	HDHD2 (ENSCHIG00000015973) #23	IER3IP1 (ENSCHIG00000020552) #24	SKOR2 (ENSCHIG00000011642) #25	SMAD2 (ENSCHIG00000020206) #26	ZBTB7C (ENSCHIG00000001635) #27	CTIF (ENSCHIG00000014455) #28	SMAD7 (ENSCHIG00000019461) #29	DYM (ENSCHIG00000001838) #31	ENSCHIG00000004940	C18orf32 (ENSCHIG00000021354) #32	ENSCHIG00000011677	LIPG (ENSCHIG00000015994) #33	ENSCHIG00000003894	ACAA2 (ENSCHIG00000024466) #34	MYO5B (ENSCHIG00000016585) #35
Bovinae	ANCESTRAL SPECIES	28	ENSGT01030000235502	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788 #13	ENSGT00550000074846.ab #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.i.b #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Bos	ANCESTRAL SPECIES	29	ENSGT00390000010047.b.kb	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788 #13	ENSGT00550000074846.ab #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.i.b #32	ENSGT00950000183010.a.b.a.b.a	ENSGT00390000018741.j #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Bos_b	ANCESTRAL SPECIES	34	ENSGT01030000235502	ENSGT00390000010047.b.kb	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.ab #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.i.b #32	ENSGT00950000183010.a.b.a.b.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT00950000183005.a.a #37	ENSGT00730000111044
Cow	MODERN SPECIES	16	SETBP1 (ENSBTAG00000018088) #7	SLC14A2 (ENSBTAG00000002099) #9	SLC14A1 (ENSBTAG00000019870) #10	SIGLEC15 (ENSBTAG00000016620) #11	EPG5 (ENSBTAG00000012067) #12	PSTPIP2 (ENSBTAG00000002624) #13	ATP5F1A (ENSBTAG00000002507) #14	HAUS1 (ENSBTAG00000002512) #15	C24H18orf25 (ENSBTAG00000032964) #16	RNF165 (ENSBTAG00000001128) #17	ENSBTAG00000048422	LOXHD1 (ENSBTAG00000015210) #18	ST8SIA5 (ENSBTAG00000001770) #19	PIAS2 (ENSBTAG00000007833) #20	ENSBTAG00000047547	KATNAL2 (ENSBTAG00000019331) #22	HDHD2 (ENSBTAG00000011893) #23	IER3IP1 (ENSBTAG00000032961) #24	SKOR2 (ENSBTAG00000032962) #25	SMAD2 (ENSBTAG00000039916) #26	ZBTB7C (ENSBTAG00000013306) #27	CTIF (ENSBTAG00000018901) #28	SMAD7 (ENSBTAG00000012441) #29	DYM (ENSBTAG00000000024) #31	C24H18orf32 (ENSBTAG00000021334) #32	RPL17 (ENSBTAG00000022902)	LIPG (ENSBTAG00000048916) #33	ACAA2 (ENSBTAG00000002863) #34	MYO5B (ENSBTAG00000019455) #35	MBD1 (ENSBTAG00000003801) #37	CXXC1 (ENSBTAG00000021884)
Hybrid Bos Indicus	MODERN SPECIES	16	SETBP1 (ENSBIXG00005029205) #7	SLC14A2 (ENSBIXG00005029181) #9	SLC14A1 (ENSBIXG00005001781) #10	SIGLEC15 (ENSBIXG00005029135) #11	EPG5 (ENSBIXG00005005178) #12	PSTPIP2 (ENSBIXG00005029098) #13	ATP5F1A (ENSBIXG00005002010) #14	ENSBIXG00005005126 #15	C18orf25 (ENSBIXG00005002109) #16	RNF165 (ENSBIXG00005002180) #17	ENSBIXG00005005062	LOXHD1 (ENSBIXG00005028849) #18	ST8SIA5 (ENSBIXG00005028065) #19	PIAS2 (ENSBIXG00005027955) #20	ENSBIXG00005006537	KATNAL2 (ENSBIXG00005004778) #22	HDHD2 (ENSBIXG00005027742) #23	ENSBIXG00005027700	IER3IP1 (ENSBIXG00005027693) #24	SKOR2 (ENSBIXG00005004756) #25	SMAD2 (ENSBIXG00005027591) #26	ZBTB7C (ENSBIXG00005027504) #27	CTIF (ENSBIXG00005007777) #28	SMAD7 (ENSBIXG00005004711) #29	DYM (ENSBIXG00005027220) #31	ENSBIXG00005027155 #32	ENSBIXG00005007771	LIPG (ENSBIXG00005004622) #33	ACAA2 (ENSBIXG00005026872) #34	MYO5B (ENSBIXG00005026770) #35	ENSBIXG00005026615 #37
Bos_a	ANCESTRAL SPECIES	28	ENSGT00390000010047.b.kb	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788 #13	ENSGT00550000074846.ab #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.j #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT00950000183005.a.a #37	ENSGT00730000111044
Domestic yak	MODERN SPECIES	13	ENSBGRG00000017233 #7	SETBP1 (ENSBGRG00000017294) #7	SLC14A2 (ENSBGRG00000017535) #9	SLC14A1 (ENSBGRG00000017647) #10	SIGLEC15 (ENSBGRG00000018017) #11	EPG5 (ENSBGRG00000018124) #12	PSTPIP2 (ENSBGRG00000018564) #13	ATP5F1A (ENSBGRG00000018791) #14	HAUS1 (ENSBGRG00000019042) #15	C18orf25 (ENSBGRG00000019304) #16	RNF165 (ENSBGRG00000019400) #17	LOXHD1 (ENSBGRG00000019547) #18	ST8SIA5 (ENSBGRG00000021274) #19	PIAS2 (ENSBGRG00000021507) #20	ENSBGRG00000021911	KATNAL2 (ENSBGRG00000021942) #22	HDHD2 (ENSBGRG00000022037) #23	IER3IP1 (ENSBGRG00000022154) #24	ENSBGRG00000022203 #25	SMAD2 (ENSBGRG00000022238) #26	ZBTB7C (ENSBGRG00000022372) #27	CTIF (ENSBGRG00000022473) #28	ENSBGRG00000022591	SMAD7 (ENSBGRG00000022643) #29	DYM (ENSBGRG00000022704) #31	ENSBGRG00000022927 #32	ENSBGRG00000022965	LIPG (ENSBGRG00000023098) #33	ACAA2 (ENSBGRG00000023212) #34	ENSBGRG00000023371 #35	ENSBGRG00000023396 #35
Wild yak	MODERN SPECIES	2191														ST8SIA5 (ENSBMUG00000012907) #19	PIAS2 (ENSBMUG00000012834) #20	KATNAL2 (ENSBMUG00000012760) #22	HDHD2 (ENSBMUG00000012729) #23	IER3IP1 (ENSBMUG00000012714) #24	ENSBMUG00000012703 #25
American bison	MODERN SPECIES	3076															PIAS2 (ENSBBBG00000010545) #20	KATNAL2 (ENSBBBG00000010508) #22	HDHD2 (ENSBBBG00000010488) #23	IER3IP1 (ENSBBBG00000010485) #24	SKOR2 (ENSBBBG00000010476) #25	SMAD2 (ENSBBBG00000010465) #26	ZBTB7C (ENSBBBG00000010443) #27	ENSBBBG00000010424	CTIF (ENSBBBG00000010421) #28	SMAD7 (ENSBBBG00000010410) #29	DYM (ENSBBBG00000010404) #31
Siberian musk deer	MODERN SPECIES	132	SETBP1 (ENSMMSG00000011794) #7	SLC14A2 (ENSMMSG00000011706) #9	SLC14A1 (ENSMMSG00000011666) #10	SIGLEC15 (ENSMMSG00000011634) #11	EPG5 (ENSMMSG00000011583) #12	PSTPIP2 (ENSMMSG00000011495) #13	ENSMMSG00000011466	ATP5F1A (ENSMMSG00000011430) #14	HAUS1 (ENSMMSG00000011347) #15	C18orf25 (ENSMMSG00000011290) #16	RNF165 (ENSMMSG00000011227) #17	LOXHD1 (ENSMMSG00000007604) #18	ST8SIA5 (ENSMMSG00000007341) #19	PIAS2 (ENSMMSG00000007137) #20	ENSMMSG00000007106	KATNAL2 (ENSMMSG00000006988) #22	HDHD2 (ENSMMSG00000006946) #23	IER3IP1 (ENSMMSG00000006915) #24	SKOR2 (ENSMMSG00000006829) #25	ENSMMSG00000006765 #26	ZBTB7C (ENSMMSG00000006737) #27	CTIF (ENSMMSG00000006694) #28	SMAD7 (ENSMMSG00000006627) #29	DYM (ENSMMSG00000006548) #31	C18orf32 (ENSMMSG00000006526) #32	ENSMMSG00000006453	LIPG (ENSMMSG00000006397) #33	ACAA2 (ENSMMSG00000006348) #34	ENSMMSG00000006303	MYO5B (ENSMMSG00000006238) #35	CFAP53 (ENSMMSG00000006206) #36
Camelidae	ANCESTRAL SPECIES	53			ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234539.a.a.b.b #20	ENSGT00390000002428.a.g.b #21	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37	ENSGT00730000111044
Arabian camel	MODERN SPECIES	23	SETBP1 (ENSCDRG00005016013) #7	ENSCDRG00005015929 #9	ENSCDRG00005015812 #9	SLC14A1 (ENSCDRG00005015615) #10	SIGLEC15 (ENSCDRG00005015557) #11	EPG5 (ENSCDRG00005015455) #12	PSTPIP2 (ENSCDRG00005015365) #13	ATP5F1A (ENSCDRG00005015287) #14	HAUS1 (ENSCDRG00005015141) #15	C18orf25 (ENSCDRG00005015062) #16	ENSCDRG00005015011	ENSCDRG00005014972 #17	LOXHD1 (ENSCDRG00005013391) #18	PIAS2 (ENSCDRG00005013189) #20	ENSCDRG00005013155 #21	KATNAL2 (ENSCDRG00005012992) #22	HDHD2 (ENSCDRG00005012918) #23	IER3IP1 (ENSCDRG00005012846) #24	SMAD2 (ENSCDRG00005012465) #26	ZBTB7C (ENSCDRG00005012395) #27	CTIF (ENSCDRG00005012119) #28	ENSCDRG00005012050 #29	ENSCDRG00005012031	DYM (ENSCDRG00005011719) #31	C18orf32 (ENSCDRG00005011639) #32	RPL17 (ENSCDRG00005011453)	LIPG (ENSCDRG00005010970) #33	ENSCDRG00005010930	ACAA2 (ENSCDRG00005010799) #34	MYO5B (ENSCDRG00005010461) #35	CFAP53 (ENSCDRG00005010332) #36
Alpaca	MODERN SPECIES	1747																KATNAL2 (ENSVPAG00000006199) #22	HDHD2 (ENSVPAG00000006202) #23	ENSVPAG00000006203
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Carnivora	ANCESTRAL SPECIES	13	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Caniformia	ANCESTRAL SPECIES	9	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Ursidae	ANCESTRAL SPECIES	23	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT00940000167582	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Ursus	ANCESTRAL SPECIES	25	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.d	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37	ENSGT00730000111044
Polar bear	MODERN SPECIES	96	PIK3C3 (ENSUMAG00000002253)	RIT2 (ENSUMAG00000002274)	SYT4 (ENSUMAG00000002280)	SETBP1 (ENSUMAG00000002294) #7	ENSUMAG00000002312 #9	SLC14A1 (ENSUMAG00000002359) #10	EPG5 (ENSUMAG00000002362) #12	PSTPIP2 (ENSUMAG00000002367) #13	ATP5F1A (ENSUMAG00000002375) #14	HAUS1 (ENSUMAG00000002378) #15	C18orf25 (ENSUMAG00000002382) #16	RNF165 (ENSUMAG00000002386) #17	LOXHD1 (ENSUMAG00000002413) #18	ST8SIA5 (ENSUMAG00000002618) #19	PIAS2 (ENSUMAG00000002661) #20	KATNAL2 (ENSUMAG00000002674) #22	HDHD2 (ENSUMAG00000002716) #23	IER3IP1 (ENSUMAG00000002717) #24	SMAD2 (ENSUMAG00000002720) #26	ZBTB7C (ENSUMAG00000002721) #27	CTIF (ENSUMAG00000002735) #28	ENSUMAG00000002746 #29	DYM (ENSUMAG00000002750) #31	C18orf32 (ENSUMAG00000002755) #32	ENSUMAG00000002766	LIPG (ENSUMAG00000002779) #33	ACAA2 (ENSUMAG00000002792) #34	MYO5B (ENSUMAG00000002812) #35	MBD1 (ENSUMAG00000002947) #37	CXXC1 (ENSUMAG00000003014)	SKA1 (ENSUMAG00000003034)
American black bear	MODERN SPECIES	2361																KATNAL2 (ENSUAMG00000008519) #22
Giant Panda	MODERN SPECIES	5	RIT2 (ENSAMEG00000024343)	SYT4 (ENSAMEG00000006769)	SETBP1 (ENSAMEG00000029118) #7	ENSAMEG00000005289 #9	SLC14A1 (ENSAMEG00000012521) #10	ENSAMEG00000027408	EPG5 (ENSAMEG00000012534) #12	PSTPIP2 (ENSAMEG00000012579) #13	ATP5F1A (ENSAMEG00000012614) #14	HAUS1 (ENSAMEG00000012644) #15	ENSAMEG00000025621	C18orf25 (ENSAMEG00000012662) #16	RNF165 (ENSAMEG00000012667) #17	LOXHD1 (ENSAMEG00000012676) #18	PIAS2 (ENSAMEG00000012748) #20	KATNAL2 (ENSAMEG00000012794) #22	HDHD2 (ENSAMEG00000012799) #23	IER3IP1 (ENSAMEG00000023574) #24	ENSAMEG00000012815 #25	SMAD2 (ENSAMEG00000012816) #26	ZBTB7C (ENSAMEG00000012857) #27	CTIF (ENSAMEG00000029852) #28	SMAD7 (ENSAMEG00000031009) #29	DYM (ENSAMEG00000006724) #31	ENSAMEG00000027976 #32	RPL17 (ENSAMEG00000009498)	LIPG (ENSAMEG00000009434) #33	ACAA2 (ENSAMEG00000009411) #34	MYO5B (ENSAMEG00000009253) #35	MBD1 (ENSAMEG00000000238) #37	CXXC1 (ENSAMEG00000000259)
Mustelinae	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Ferret	MODERN SPECIES	195	RIT2 (ENSMPUG00000001015)	SYT4 (ENSMPUG00000001012)	SETBP1 (ENSMPUG00000001006) #7	ENSMPUG00000001002 #9	SLC14A1 (ENSMPUG00000000989) #10	SIGLEC15 (ENSMPUG00000000985) #11	EPG5 (ENSMPUG00000000970) #12	PSTPIP2 (ENSMPUG00000000965) #13	ENSMPUG00000000923 #14	HAUS1 (ENSMPUG00000000919) #15	C18orf25 (ENSMPUG00000000916) #16	RNF165 (ENSMPUG00000000899) #17	LOXHD1 (ENSMPUG00000000881) #18	ST8SIA5 (ENSMPUG00000000867) #19	PIAS2 (ENSMPUG00000000861) #20	KATNAL2 (ENSMPUG00000000857) #22	HDHD2 (ENSMPUG00000000855) #23	ENSMPUG00000000851 #25	SMAD2 (ENSMPUG00000000850) #26	ZBTB7C (ENSMPUG00000000848) #27	CTIF (ENSMPUG00000000844) #28	SMAD7 (ENSMPUG00000000842) #29	DYM (ENSMPUG00000000838) #31	ENSMPUG00000000819	ENSMPUG00000000801	LIPG (ENSMPUG00000000750) #33	ACAA2 (ENSMPUG00000000749) #34	MYO5B (ENSMPUG00000000748) #35
American mink	MODERN SPECIES	1	SYT4 (ENSNVIG00000021264)	ENSNVIG00000021282	SETBP1 (ENSNVIG00000000055) #7	ENSNVIG00000000164 #9	UT1 (ENSNVIG00000000284) #10	SIGLEC15 (ENSNVIG00000000415) #11	EPG5 (ENSNVIG00000000422) #12	PSTPIP2 (ENSNVIG00000000692) #13	ATP5F1A (ENSNVIG00000000707) #14	HAUS1 (ENSNVIG00000000735) #15	CR025 (ENSNVIG00000000751) #16	RNF165 (ENSNVIG00000000779) #17	LOXHD1 (ENSNVIG00000000795) #18	B7Z1K9 (ENSNVIG00000001042) #19	PIAS2 (ENSNVIG00000001141) #20	KATNAL2 (ENSNVIG00000001211) #22	HDHD2 (ENSNVIG00000001251) #23	IER3IP1 (ENSNVIG00000001270) #24	SKOR2 (ENSNVIG00000001287) #25	SMAD2 (ENSNVIG00000001323) #26	ZBTB7C (ENSNVIG00000001419) #27	CTIF (ENSNVIG00000001442) #28	SMAD7 (ENSNVIG00000001490) #29	DYM (ENSNVIG00000001500) #31	CR032 (ENSNVIG00000001568) #32	RPL17 (ENSNVIG00000001575)	LIPG (ENSNVIG00000001676) #33	ACAA2 (ENSNVIG00000001712) #34	MYO5B (ENSNVIG00000001798) #35	CFAP53 (ENSNVIG00000001864) #36	ENSNVIG00000001883
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000159026	ENSGT00390000016908.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b.a #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000161606	ENSGT00940000162189	ENSGT00910000144329	ENSGT00940000161896.a.a	ENSGT00940000161986	ENSGT00940000161276.C	ENSGT00940000161959	ENSGT00940000163114	ENSGT00390000000920	ENSGT00940000161706	ENSGT00940000161854
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00390000016908.b	ENSGT00950000182901.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.bb.b.a #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000161606	ENSGT00940000162189	ENSGT00910000144329	ENSGT00940000161896.a.a	ENSGT00940000161986	ENSGT00940000161276.C	ENSGT00940000161959	ENSGT00940000163114	ENSGT00390000000920	ENSGT00940000161706	ENSGT00940000161854
Dog	MODERN SPECIES	35	ENSCAFG00845003617	SETBP1 (ENSCAFG00845003603) #7	ENSCAFG00845003594 #9	ENSCAFG00845003569 #9	SLC14A1 (ENSCAFG00845003486) #10	SIGLEC15 (ENSCAFG00845003447) #11	EPG5 (ENSCAFG00845003404) #12	PSTPIP2 (ENSCAFG00845003305) #13	ATP5F1A (ENSCAFG00845003277) #14	HAUS1 (ENSCAFG00845003245) #15	C7H18orf25 (ENSCAFG00845003164) #16	C7H18orf25 (ENSCAFG00845003098) #17	ENSCAFG00845002851 #18	ST8SIA5 (ENSCAFG00845002742) #19	PIAS2 (ENSCAFG00845002646) #20	KATNAL2 (ENSCAFG00845002494) #22	HDHD2 (ENSCAFG00845002479) #23	IER3IP1 (ENSCAFG00845002460) #24	SKOR2 (ENSCAFG00845002418) #25	SMAD2 (ENSCAFG00845002338) #26	S100A9 (ENSCAFG00845002276)	S100A8 (ENSCAFG00845002254)	S100A8 (ENSCAFG00845002217)	S100A5 (ENSCAFG00845002122)	S100A4 (ENSCAFG00845002094)	S100A2 (ENSCAFG00845002036)	S100A16 (ENSCAFG00845002007)	S100A14 (ENSCAFG00845001986)	S100A13 (ENSCAFG00845001940)	S100A1 (ENSCAFG00845001897)	CHTOP (ENSCAFG00845001816)
Dingo	MODERN SPECIES	271	SYT4 (ENSCAFG00020011042)	ENSCAFG00020011019	SETBP1 (ENSCAFG00020010948) #7	ENSCAFG00020010873 #9	SLC14A1 (ENSCAFG00020010836) #10	SIGLEC15 (ENSCAFG00020010814) #11	EPG5 (ENSCAFG00020010774) #12	PSTPIP2 (ENSCAFG00020010751) #13	ENSCAFG00020010725 #14	HAUS1 (ENSCAFG00020010719) #15	C18orf25 (ENSCAFG00020010717) #16	RNF165 (ENSCAFG00020010709) #17	LOXHD1 (ENSCAFG00020010557) #18	ST8SIA5 (ENSCAFG00020010505) #19	PIAS2 (ENSCAFG00020010501) #20	KATNAL2 (ENSCAFG00020010403) #22	HDHD2 (ENSCAFG00020010391) #23	ENSCAFG00020010389 #24	SKOR2 (ENSCAFG00020010387) #25	ENSCAFG00020010376 #26	ENSCAFG00020010374 #26	ENSCAFG00020010368	S100A12 (ENSCAFG00020010365)	S100A8 (ENSCAFG00020010359)	ENSCAFG00020010358	S100A5 (ENSCAFG00020010354)	ENSCAFG00020010352	S100A3 (ENSCAFG00020010349)	S100A2 (ENSCAFG00020010348)	S100A16 (ENSCAFG00020010346)	S100A14 (ENSCAFG00020010345)
Red fox	MODERN SPECIES	23	SYT4 (ENSVVUG00000027777)	ENSVVUG00000027783	ENSVVUG00000027791	SETBP1 (ENSVVUG00000027793) #7	SLC14A2 (ENSVVUG00000027800) #9	SLC14A1 (ENSVVUG00000027806) #10	EPG5 (ENSVVUG00000027828) #12	PSTPIP2 (ENSVVUG00000027962) #13	ENSVVUG00000028013 #14	HAUS1 (ENSVVUG00000028089) #15	CUNH18orf25 (ENSVVUG00000028091) #16	RNF165 (ENSVVUG00000028094) #17	LOXHD1 (ENSVVUG00000028114) #18	ST8SIA5 (ENSVVUG00000028155) #19	PIAS2 (ENSVVUG00000028165) #20	KATNAL2 (ENSVVUG00000028183) #22	HDHD2 (ENSVVUG00000028191) #23	IER3IP1 (ENSVVUG00000028197) #24	ENSVVUG00000028208 #25	SMAD2 (ENSVVUG00000028225) #26	S100A9 (ENSVVUG00000028236)	S100A12 (ENSVVUG00000028241)	S100A8 (ENSVVUG00000028243)	ENSVVUG00000028244	S100A5 (ENSVVUG00000028245)	S100A4 (ENSVVUG00000028246)	S100A3 (ENSVVUG00000028247)	S100A2 (ENSVVUG00000028250)	S100A16 (ENSVVUG00000028251)	S100A14 (ENSVVUG00000028252)	S100A13 (ENSVVUG00000028253)
Felidae	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00390000017839.o.b.b.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741.m #32	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36	ENSGT00950000183005.a.a #37
Panthera	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00390000017839.o.b.b.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00940000153201.j.n	ENSGT00390000008772 #31	ENSGT00390000018741.m #32	ENSGT00950000183010.a.a.a.b.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Panthera_a	ANCESTRAL SPECIES	26	ENSGT00940000159026	ENSGT00390000017839.o.b.b.b	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00940000153201.j.n	ENSGT00390000008772 #31	ENSGT00390000018741.m #32	ENSGT00950000183010.a.a.a.b.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
leopard	MODERN SPECIES	43	SYT4 (ENSPPRG00000021203)	ENSPPRG00000022104	SETBP1 (ENSPPRG00000024951) #7	ENSPPRG00000024428 #9	SLC14A1 (ENSPPRG00000022676) #10	SIGLEC15 (ENSPPRG00000000322) #11	EPG5 (ENSPPRG00000000539) #12	PSTPIP2 (ENSPPRG00000002553) #13	ATP5F1A (ENSPPRG00000004018) #14	HAUS1 (ENSPPRG00000004691) #15	C18orf25 (ENSPPRG00000005801) #16	RNF165 (ENSPPRG00000006559) #17	LOXHD1 (ENSPPRG00000016773) #18	ST8SIA5 (ENSPPRG00000018954) #19	PIAS2 (ENSPPRG00000023399) #20	KATNAL2 (ENSPPRG00000023079) #22	HDHD2 (ENSPPRG00000022964) #23	IER3IP1 (ENSPPRG00000022716) #24	ENSPPRG00000000048 #25	SMAD2 (ENSPPRG00000000616) #26	ZBTB7C (ENSPPRG00000001432) #27	CTIF (ENSPPRG00000002265) #28	SMAD7 (ENSPPRG00000002686) #29	ENSPPRG00000003458	DYM (ENSPPRG00000004872) #31	ENSPPRG00000004942 #32	ENSPPRG00000006166	LIPG (ENSPPRG00000009382) #33	ACAA2 (ENSPPRG00000009885) #34	MYO5B (ENSPPRG00000012444) #35	CFAP53 (ENSPPRG00000012971) #36
lion	MODERN SPECIES	12	ZNF236 (ENSPLOG00000018933)	ENSPLOG00000018869	SETBP1 (ENSPLOG00000018804) #7	ENSPLOG00000018641 #9	SLC14A1 (ENSPLOG00000018513) #10	SIGLEC15 (ENSPLOG00000018426) #11	EPG5 (ENSPLOG00000018247) #12	PSTPIP2 (ENSPLOG00000018143) #13	ATP5F1A (ENSPLOG00000018053) #14	HAUS1 (ENSPLOG00000017982) #15	C18orf25 (ENSPLOG00000017933) #16	RNF165 (ENSPLOG00000017833) #17	LOXHD1 (ENSPLOG00000016139) #18	ST8SIA5 (ENSPLOG00000015755) #19	PIAS2 (ENSPLOG00000015647) #20	KATNAL2 (ENSPLOG00000015369) #22	HDHD2 (ENSPLOG00000015310) #23	IER3IP1 (ENSPLOG00000015259) #24	SKOR2 (ENSPLOG00000015171) #25	SMAD2 (ENSPLOG00000014910) #26	ZBTB7C (ENSPLOG00000014833) #27	CTIF (ENSPLOG00000014765) #28	SMAD7 (ENSPLOG00000014649) #29	ENSPLOG00000014599	DYM (ENSPLOG00000014488) #31	ENSPLOG00000014438 #32	ENSPLOG00000014279	LIPG (ENSPLOG00000014024) #33	ACAA2 (ENSPLOG00000013846) #34	MYO5B (ENSPLOG00000013501) #35	CFAP53 (ENSPLOG00000013386) #36
Tiger	MODERN SPECIES	143				SETBP1 (ENSPTIG00000007128) #7	ENSPTIG00000004707 #9	SLC14A1 (ENSPTIG00000021937) #10	EPG5 (ENSPTIG00000021849) #12	PSTPIP2 (ENSPTIG00000021622) #13	ATP5F1A (ENSPTIG00000020666) #14	HAUS1 (ENSPTIG00000020327) #15	C18orf25 (ENSPTIG00000018925) #16	ENSPTIG00000018660 #17	LOXHD1 (ENSPTIG00000003929) #18	ST8SIA5 (ENSPTIG00000021493) #19	PIAS2 (ENSPTIG00000020076) #20	KATNAL2 (ENSPTIG00000019828) #22	HDHD2 (ENSPTIG00000019534) #23	IER3IP1 (ENSPTIG00000019219) #24	ENSPTIG00000019038 #25	SMAD2 (ENSPTIG00000015931) #26	ENSPTIG00000014786	CTIF (ENSPTIG00000013761) #28	ENSPTIG00000013182 #29	ENSPTIG00000012715	DYM (ENSPTIG00000011072) #31	C18orf32 (ENSPTIG00000009698) #32	ENSPTIG00000007691	LIPG (ENSPTIG00000000449) #33	ACAA2 (ENSPTIG00000021827) #34	MYO5B (ENSPTIG00000019987) #35	CFAP53 (ENSPTIG00000018895) #36
Cat	MODERN SPECIES	243	SYT4 (ENSFCAG00000033996)	ENSFCAG00000045259	SETBP1 (ENSFCAG00000007346) #7	ENSFCAG00000010670 #9	SLC14A1 (ENSFCAG00000025903) #10	SIGLEC15 (ENSFCAG00000031358) #11	EPG5 (ENSFCAG00000010674) #12	PSTPIP2 (ENSFCAG00000029753) #13	ATP5F1A (ENSFCAG00000025952) #14	HAUS1 (ENSFCAG00000003729) #15	CD3H18orf25 (ENSFCAG00000030676) #16	RNF165 (ENSFCAG00000002784) #17	LOXHD1 (ENSFCAG00000002785) #18	ST8SIA5 (ENSFCAG00000002786) #19	PIAS2 (ENSFCAG00000002787) #20	KATNAL2 (ENSFCAG00000018778) #22	HDHD2 (ENSFCAG00000002788) #23	IER3IP1 (ENSFCAG00000032516) #24	SKOR2 (ENSFCAG00000045761) #25	SMAD2 (ENSFCAG00000013266) #26	ZBTB7C (ENSFCAG00000030658) #27	CTIF (ENSFCAG00000000664) #28	SMAD7 (ENSFCAG00000042475) #29	DYM (ENSFCAG00000012954) #31	ENSFCAG00000022684 #32	RPL17 (ENSFCAG00000011342)	LIPG (ENSFCAG00000012354) #33	MYO5B (ENSFCAG00000009880) #35	MBD1 (ENSFCAG00000015730) #37	CXXC1 (ENSFCAG00000006135)	SKA1 (ENSFCAG00000023341)
Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.a #11	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Equus	ANCESTRAL SPECIES	36	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT01030000240358	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Horse	MODERN SPECIES	29	SYT4 (ENSECAG00000017570)	SETBP1 (ENSECAG00000019793) #7	SLC14A2 (ENSECAG00000034918) #9	SLC14A1 (ENSECAG00000014487) #10	SIGLEC15 (ENSECAG00000018025) #11	EPG5 (ENSECAG00000002267) #12	PSTPIP2 (ENSECAG00000019025) #13	ATP5F1A (ENSECAG00000021561) #14	HAUS1 (ENSECAG00000016553) #15	C18orf25 (ENSECAG00000020333) #16	ENSECAG00000031869	RNF165 (ENSECAG00000021547) #17	LOXHD1 (ENSECAG00000022216) #18	ST8SIA5 (ENSECAG00000023864) #19	PIAS2 (ENSECAG00000002816) #20	KATNAL2 (ENSECAG00000010207) #22	ENSECAG00000010000 #21	HDHD2 (ENSECAG00000012664) #23	IER3IP1 (ENSECAG00000026829) #24	SKOR2 (ENSECAG00000040113) #25	SMAD2 (ENSECAG00000015132) #26	ZBTB7C (ENSECAG00000020456) #27	CTIF (ENSECAG00000020473) #28	SMAD7 (ENSECAG00000020583) #29	DYM (ENSECAG00000001651) #31	C18orf32 (ENSECAG00000046374) #32	ENSECAG00000011547	LIPG (ENSECAG00000015140) #33	ENSECAG00000059774	ACAA2 (ENSECAG00000019394) #34	MYO5B (ENSECAG00000022515) #35
Donkey	MODERN SPECIES	27	SYT4 (ENSEASG00005016507)	SETBP1 (ENSEASG00005016505) #7	SLC14A2 (ENSEASG00005016499) #9	SLC14A1 (ENSEASG00005016489) #10	EPG5 (ENSEASG00005016455) #12	SIGLEC15 (ENSEASG00005034343) #11	PSTPIP2 (ENSEASG00005016428) #13	ATP5F1A (ENSEASG00005016183) #14	HAUS1 (ENSEASG00005016165) #15	C18orf25 (ENSEASG00005016164) #16	RNF165 (ENSEASG00005016163) #17	LOXHD1 (ENSEASG00005016151) #18	ST8SIA5 (ENSEASG00005016136) #19	PIAS2 (ENSEASG00005016126) #20	ENSEASG00005016132	KATNAL2 (ENSEASG00005016106) #22	ENSEASG00005028481 #21	HDHD2 (ENSEASG00005016104) #23	IER3IP1 (ENSEASG00005037358) #24	SKOR2 (ENSEASG00005016101) #25	SMAD2 (ENSEASG00005016099) #26	ZBTB7C (ENSEASG00005016097) #27	CTIF (ENSEASG00005016094) #28	SMAD7 (ENSEASG00005016092) #29	DYM (ENSEASG00005015845) #31	ENSEASG00005031152 #32	ENSEASG00005025626	LIPG (ENSEASG00005005399) #33	ACAA2 (ENSEASG00005005395) #34	MYO5B (ENSEASG00005004025) #35	ENSEASG00005003857 #37
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.b	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a.b #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b #21	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01050000244995 #36
Greater horseshoe bat	MODERN SPECIES	10	SETBP1 (ENSRFEG00010009647) #7	SLC14A2 (ENSRFEG00010009717) #9	SLC14A1 (ENSRFEG00010009754) #10	ENSRFEG00010009827	SIGLEC15 (ENSRFEG00010009873) #11	EPG5 (ENSRFEG00010009969) #12	PSTPIP2 (ENSRFEG00010010012) #13	ATP5F1A (ENSRFEG00010010087) #14	HAUS1 (ENSRFEG00010010163) #15	C18orf25 (ENSRFEG00010010226) #16	RNF165 (ENSRFEG00010010311) #17	LOXHD1 (ENSRFEG00010010653) #18	ST8SIA5 (ENSRFEG00010012732) #19	ENSRFEG00010012921	PIAS2 (ENSRFEG00010012942) #20	KATNAL2 (ENSRFEG00010013030) #22	ENSRFEG00010013519 #21	HDHD2 (ENSRFEG00010013605) #23	IER3IP1 (ENSRFEG00010013708) #24	SKOR2 (ENSRFEG00010013793) #25	SMAD2 (ENSRFEG00010013927) #26	ZBTB7C (ENSRFEG00010014086) #27	CTIF (ENSRFEG00010014128) #28	SMAD7 (ENSRFEG00010014226) #29	DYM (ENSRFEG00010014390) #31	C18orf32 (ENSRFEG00010014487) #32	LIPG (ENSRFEG00010014542) #33	ACAA2 (ENSRFEG00010014660) #34	MYO5B (ENSRFEG00010014892) #35	CFAP53 (ENSRFEG00010015022) #36	MBD1 (ENSRFEG00010015077) #37
Microbat	MODERN SPECIES	953	SYT4 (ENSMLUG00000016472)	ENSMLUG00000022722 #7	ENSMLUG00000013354 #7	SLC14A2 (ENSMLUG00000000990) #9	SLC14A1 (ENSMLUG00000004885) #10	SIGLEC15 (ENSMLUG00000004894) #11	EPG5 (ENSMLUG00000009791) #12	PSTPIP2 (ENSMLUG00000009831) #13	ATP5F1A (ENSMLUG00000009856) #14	HAUS1 (ENSMLUG00000009879) #15	C18orf25 (ENSMLUG00000008806) #16	RNF165 (ENSMLUG00000008813) #17	LOXHD1 (ENSMLUG00000008832) #18	ST8SIA5 (ENSMLUG00000008890) #19	ENSMLUG00000008902 #20	KATNAL2 (ENSMLUG00000004078) #22	HDHD2 (ENSMLUG00000004087) #23	ENSMLUG00000028696 #25	ENSMLUG00000028440 #25	SMAD2 (ENSMLUG00000008857) #26	ZBTB7C (ENSMLUG00000030000) #27	CTIF (ENSMLUG00000003025) #28	SMAD7 (ENSMLUG00000016080) #29	DYM (ENSMLUG00000003419) #31	ENSMLUG00000029264	LIPG (ENSMLUG00000004113) #33	ACAA2 (ENSMLUG00000022960) #34	MYO5B (ENSMLUG00000016701) #35	ENSMLUG00000016723	MBD1 (ENSMLUG00000008286) #37	CXXC1 (ENSMLUG00000025328)
Megabat	MODERN SPECIES	6062																KATNAL2 (ENSPVAG00000017469) #22	HDHD2 (ENSPVAG00000017468) #23	IER3IP1 (ENSPVAG00000017467) #24	ENSPVAG00000017466 #25
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157302 #22
Hedgehog	MODERN SPECIES	6197																KATNAL2 (ENSEEUG00000015731) #22
Common shrew	MODERN SPECIES	4832																ENSSARG00000001158 #22
Atlantogenata	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT01050000244995 #36
Afrotheria	ANCESTRAL SPECIES	23	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Afrotheria_a	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00940000164047.c.b	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.a.a.b.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01100000263809	ENSGT00950000183005.a.a #37
Elephant	MODERN SPECIES	375	ENSLAFG00000012899	SETBP1 (ENSLAFG00000003458) #7	SLC14A2 (ENSLAFG00000026942) #9	SLC14A1 (ENSLAFG00000009224) #10	EPG5 (ENSLAFG00000002464) #12	ENSLAFG00000002465 #13	ATP5F1A (ENSLAFG00000014779) #14	ENSLAFG00000031983 #15	ENSLAFG00000010897 #15	C18orf25 (ENSLAFG00000013703) #16	ENSLAFG00000008497 #17	ENSLAFG00000030824	LOXHD1 (ENSLAFG00000008500) #18	ST8SIA5 (ENSLAFG00000010716) #19	PIAS2 (ENSLAFG00000018135) #20	KATNAL2 (ENSLAFG00000004417) #22	HDHD2 (ENSLAFG00000004419) #23	SKOR2 (ENSLAFG00000020778) #25	SMAD2 (ENSLAFG00000000143) #26	ZBTB7C (ENSLAFG00000003436) #27	CTIF (ENSLAFG00000016335) #28	SMAD7 (ENSLAFG00000008013) #29	DYM (ENSLAFG00000017747) #31	C18orf32 (ENSLAFG00000021351) #32	RPL17 (ENSLAFG00000005569)	LIPG (ENSLAFG00000003595) #33	ACAA2 (ENSLAFG00000022796) #34	MYO5B (ENSLAFG00000015591) #35	ENSLAFG00000015611	MBD1 (ENSLAFG00000031328) #37	CXXC1 (ENSLAFG00000030706)
Hyrax	MODERN SPECIES	5089																ENSPCAG00000007867 #22	HDHD2 (ENSPCAG00000007936) #23
Tenrec	MODERN SPECIES	6019																KATNAL2 (ENSETEG00000007310) #22
Xenarthra	ANCESTRAL SPECIES	212				ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E.o.a #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.gb #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25
Armadillo	MODERN SPECIES	4785			SLC14A2 (ENSDNOG00000017162) #9	SLC14A1 (ENSDNOG00000032760) #10	SIGLEC15 (ENSDNOG00000014982) #11	ENSDNOG00000035305 #12	ENSDNOG00000014995 #12	PSTPIP2 (ENSDNOG00000037520) #13	ENSDNOG00000006331 #14	HAUS1 (ENSDNOG00000033685) #15	C18orf25 (ENSDNOG00000048603) #16	RNF165 (ENSDNOG00000023586) #17	LOXHD1 (ENSDNOG00000005137) #18	ST8SIA5 (ENSDNOG00000032248) #19	ENSDNOG00000011855 #20	KATNAL2 (ENSDNOG00000001108) #22	HDHD2 (ENSDNOG00000001000) #23	IER3IP1 (ENSDNOG00000032201) #24	ENSDNOG00000025727 #25
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.e #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01070000254624	ENSGT00940000164634
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.e #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01070000254624	ENSGT00940000164634
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.e #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.b	ENSGT00950000183010.a.b.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01070000254624
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.b #9	ENSGT00390000018729.a.a #10	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.e #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01070000254624	ENSGT00940000164634
Common wonbat	MODERN SPECIES	1028	SETBP1 (ENSVURG00010022154) #7	ENSVURG00010022157	SLC14A2 (ENSVURG00010022169) #9	SLC14A1 (ENSVURG00010022183) #10	ENSVURG00010022201 #11	EPG5 (ENSVURG00010022212) #12	PSTPIP2 (ENSVURG00010022237) #13	ENSVURG00010022245 #14	HAUS1 (ENSVURG00010022251) #15	C18orf25 (ENSVURG00010022255) #16	RNF165 (ENSVURG00010022261) #17	ENSVURG00010022265 #18	ENSVURG00010022268 #18	ST8SIA5 (ENSVURG00010022274) #19	PIAS2 (ENSVURG00010022283) #20	KATNAL2 (ENSVURG00010022300) #22	HDHD2 (ENSVURG00010000102) #23	IER3IP1 (ENSVURG00010000126) #24	SKOR2 (ENSVURG00010000155) #25	SMAD2 (ENSVURG00010000218) #26	ZBTB7C (ENSVURG00010000266) #27	CTIF (ENSVURG00010000308) #28	SMAD7 (ENSVURG00010000339) #29	DYM (ENSVURG00010000407) #31	C18orf32 (ENSVURG00010000458) #32	LIPG (ENSVURG00010000510) #33	ACAA2 (ENSVURG00010000570) #34	MYO5B (ENSVURG00010000687) #35	ENSVURG00010000828	ENSVURG00010000841	ENSVURG00010000853
koala	MODERN SPECIES	22	ENSPCIG00000011742	ENSPCIG00000019335	SLC14A2 (ENSPCIG00000019330) #9	SLC14A1 (ENSPCIG00000019326) #10	ENSPCIG00000019325 #11	EPG5 (ENSPCIG00000019029) #12	PSTPIP2 (ENSPCIG00000026564) #13	ENSPCIG00000006831	ENSPCIG00000006824 #14	HAUS1 (ENSPCIG00000006819) #15	C18orf25 (ENSPCIG00000006809) #16	RNF165 (ENSPCIG00000006802) #17	ENSPCIG00000006735 #18	ENSPCIG00000006722 #19	PIAS2 (ENSPCIG00000006717) #20	KATNAL2 (ENSPCIG00000006712) #22	HDHD2 (ENSPCIG00000006706) #23	IER3IP1 (ENSPCIG00000033187) #24	SKOR2 (ENSPCIG00000006700) #25	SMAD2 (ENSPCIG00000015690) #26	ZBTB7C (ENSPCIG00000015685) #27	CTIF (ENSPCIG00000026247) #28	SMAD7 (ENSPCIG00000019168) #29	DYM (ENSPCIG00000031532) #31	C18orf32 (ENSPCIG00000032291) #32	ENSPCIG00000028230	LIPG (ENSPCIG00000028229) #33
Wallaby	MODERN SPECIES	7494																ENSMEUG00000011954 #22
Tasmanian devil	MODERN SPECIES		RIT2 (ENSSHAG00000027427)	SYT4 (ENSSHAG00000030482)	SETBP1 (ENSSHAG00000011290) #7	SLC14A2 (ENSSHAG00000016114) #9	SLC14A1 (ENSSHAG00000032087) #10	ENSSHAG00000016659 #11	EPG5 (ENSSHAG00000016721) #12	PSTPIP2 (ENSSHAG00000017036) #13	ENSSHAG00000017177 #14	HAUS1 (ENSSHAG00000030289) #15	C18orf25 (ENSSHAG00000017414) #16	RNF165 (ENSSHAG00000017805) #17	ENSSHAG00000017868 #18	ST8SIA5 (ENSSHAG00000021657) #19	PIAS2 (ENSSHAG00000005954) #20	KATNAL2 (ENSSHAG00000003042) #22	HDHD2 (ENSSHAG00000024217) #23	SKOR2 (ENSSHAG00000025447) #25	ENSSHAG00000012107	SMAD2 (ENSSHAG00000012837) #26	ZBTB7C (ENSSHAG00000024277) #27	CTIF (ENSSHAG00000027815) #28	SMAD7 (ENSSHAG00000017444) #29	DYM (ENSSHAG00000001181) #31	ENSSHAG00000030929 #32	ENSSHAG00000003060	LIPG (ENSSHAG00000004911) #33	ACAA2 (ENSSHAG00000001241) #34	ENSSHAG00000003364 #35	ENSSHAG00000010062	ENSSHAG00000026350
Opossum	MODERN SPECIES	2	ENSMODG00000045220 #10	ENSMODG00000040480 #10	ENSMODG00000003137 #11	EPG5 (ENSMODG00000025166) #12	ENSMODG00000025419	PSTPIP2 (ENSMODG00000003193) #13	ATP5F1A (ENSMODG00000003241) #14	HAUS1 (ENSMODG00000003208) #15	C18orf25 (ENSMODG00000003250) #16	ENSMODG00000043074	RNF165 (ENSMODG00000003260) #17	LOXHD1 (ENSMODG00000003285) #18	ST8SIA5 (ENSMODG00000003305) #19	ENSMODG00000048012	ENSMODG00000003324 #20	KATNAL2 (ENSMODG00000003358) #22	HDHD2 (ENSMODG00000044379) #23	IER3IP1 (ENSMODG00000037588) #24	SKOR2 (ENSMODG00000003381) #25	SMAD2 (ENSMODG00000003393) #26	ENSMODG00000042470	ZBTB7C (ENSMODG00000003412) #27	ENSMODG00000046916	CTIF (ENSMODG00000003464) #28	SMAD7 (ENSMODG00000039523) #29	DYM (ENSMODG00000003506) #31	ENSMODG00000050373	C18orf32 (ENSMODG00000003518) #32	ENSMODG00000003534	LIPG (ENSMODG00000003564) #33	ENSMODG00000039010
Platypus	MODERN SPECIES	14	ENSOANG00000045452	ENSOANG00000045275	ENSOANG00000021740	TPGS2 (ENSOANG00000004563)	ENSOANG00000045749	AQP3 (ENSOANG00000014661)	NOL6 (ENSOANG00000010217)	UBE2R2 (ENSOANG00000036151)	UBAP2 (ENSOANG00000010219)	ENSOANG00000048405	C18orf25 (ENSOANG00000004994) #16	RNF165 (ENSOANG00000014831) #17	LOXHD1 (ENSOANG00000014833) #18	ST8SIA5 (ENSOANG00000014835) #19	PIAS2 (ENSOANG00000012017) #20	KATNAL2 (ENSOANG00000012018) #22	HDHD2 (ENSOANG00000012019) #23	ENSOANG00000042577	IER3IP1 (ENSOANG00000045983) #24	SKOR2 (ENSOANG00000038832) #25	SMAD2 (ENSOANG00000001971) #26	ZBTB7C (ENSOANG00000005929) #27	CTIF (ENSOANG00000001337) #28	ENSOANG00000007611 #29	DYM (ENSOANG00000007612) #31	ENSOANG00000002910	LIPG (ENSOANG00000001131) #33	ACAA2 (ENSOANG00000002559) #34	MYO5B (ENSOANG00000008127) #35	ENSOANG00000008126	ENSOANG00000008125
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000178986	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000178986	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000158784 #7	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000154779.a.a	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Toxicofera	ANCESTRAL SPECIES	18	ENSGT00940000158784 #7	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000154779.a.a	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Elapidae	ANCESTRAL SPECIES	19	ENSGT00940000158784 #7	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000154779.a.a	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Elapidae_a	ANCESTRAL SPECIES	24															ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Blue-lipped sea krait	MODERN SPECIES	807																KATNAL2 (ENSLLTG00000012074) #22
Acanthophiinae	ANCESTRAL SPECIES	24															ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Eastern brown snake	MODERN SPECIES	2														ENSPTXG00000006543	PIAS2 (ENSPTXG00000006574) #20	KATNAL2 (ENSPTXG00000006575) #22	HDHD2 (ENSPTXG00000006576) #23	IER3IP1 (ENSPTXG00000006577) #24	SKOR2 (ENSPTXG00000006578) #25	SMAD2 (ENSPTXG00000006579) #26	ZBTB7C (ENSPTXG00000006580) #27	CTIF (ENSPTXG00000006581) #28	SMAD7 (ENSPTXG00000006582) #29	DYM (ENSPTXG00000006583) #31	C18orf32 (ENSPTXG00000006692) #32	ENSPTXG00000006694	LIPG (ENSPTXG00000006699) #33	ACAA2 (ENSPTXG00000006871) #34	MYO5B (ENSPTXG00000006873) #35	ENSPTXG00000017817	ENSPTXG00000017818
Mainland tiger snake	MODERN SPECIES	366														ENSNSUG00000010162	PIAS2 (ENSNSUG00000010159) #20	KATNAL2 (ENSNSUG00000010158) #22	ENSNSUG00000010157	IER3IP1 (ENSNSUG00000010156) #24	SKOR2 (ENSNSUG00000010155) #25
Indian cobra	MODERN SPECIES	1	ENSNNAG00000015877	PIK3C3 (ENSNNAG00000015843)	ENSNNAG00000015828	SYT4 (ENSNNAG00000015811)	ENSNNAG00000015772 #9	PSTPIP2 (ENSNNAG00000015692) #13	ATP5F1A (ENSNNAG00000015663) #14	ENSNNAG00000015653	C18orf25 (ENSNNAG00000015617) #16	ENSNNAG00000015609	RNF165 (ENSNNAG00000015582) #17	LOXHD1 (ENSNNAG00000014987) #18	ST8SIA5 (ENSNNAG00000014880) #19	ENSNNAG00000014747	PIAS2 (ENSNNAG00000014631) #20	KATNAL2 (ENSNNAG00000014598) #22	ENSNNAG00000014575 #23	IER3IP1 (ENSNNAG00000014563) #24	ENSNNAG00000014533 #23	SMAD2 (ENSNNAG00000014472) #26	ZBTB7C (ENSNNAG00000014457) #27	CTIF (ENSNNAG00000014324) #28	SMAD7 (ENSNNAG00000014299) #29	DYM (ENSNNAG00000014278) #31	C18orf32 (ENSNNAG00000014266) #32	ENSNNAG00000014239	LIPG (ENSNNAG00000013974) #33	ACAA2 (ENSNNAG00000013909) #34	MYO5B (ENSNNAG00000013682) #35	ENSNNAG00000013638	ENSNNAG00000013628
Lizard	MODERN SPECIES		ENSACAG00000012950 #11	ENSACAG00000040459	EPG5 (ENSACAG00000012846) #12	ENSACAG00000044541	PSTPIP2 (ENSACAG00000012789) #13	ATP5F1A (ENSACAG00000012698) #14	HAUS1 (ENSACAG00000012652) #15	C18orf25 (ENSACAG00000012627) #16	ENSACAG00000040406	RNF165 (ENSACAG00000012611) #17	LOXHD1 (ENSACAG00000012527) #18	ENSACAG00000038362	ST8SIA5 (ENSACAG00000012397) #19	ENSACAG00000012275	PIAS2 (ENSACAG00000012084) #20	KATNAL2 (ENSACAG00000012057) #22	HDHD2 (ENSACAG00000044652) #23	ENSACAG00000036900	SKOR2 (ENSACAG00000006146) #25	ENSACAG00000028574	KATNBL1 (ENSACAG00000015339)	EMC7 (ENSACAG00000015350)	ENSACAG00000015369	CHRM5 (ENSACAG00000015381)	AVEN (ENSACAG00000015390)	ENSACAG00000034962	RYR3 (ENSACAG00000015401)	ENSACAG00000036056	ENSACAG00000035791	ENSACAG00000038205	FMN1 (ENSACAG00000015791)
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000014558	SETBP1 (ENSPMRG00000014561) #7	ENSPMRG00000014565 #9	ENSPMRG00000014575 #11	EPG5 (ENSPMRG00000014633) #12	PSTPIP2 (ENSPMRG00000014981) #13	ATP5F1A (ENSPMRG00000014993) #14	ENSPMRG00000015002	C18orf25 (ENSPMRG00000015004) #16	ENSPMRG00000015011	RNF165 (ENSPMRG00000015013) #17	LOXHD1 (ENSPMRG00000015049) #18	ST8SIA5 (ENSPMRG00000015167) #19	ENSPMRG00000015174	PIAS2 (ENSPMRG00000015190) #20	KATNAL2 (ENSPMRG00000015210) #22	HDHD2 (ENSPMRG00000009442) #23	SKOR2 (ENSPMRG00000009448) #25	SMAD2 (ENSPMRG00000009455) #26	ENSPMRG00000009469	ZBTB7C (ENSPMRG00000009478) #27	CTIF (ENSPMRG00000009496) #28	SMAD7 (ENSPMRG00000009512) #29	DYM (ENSPMRG00000009531) #31	C18orf32 (ENSPMRG00000009571) #32	ENSPMRG00000009575	LIPG (ENSPMRG00000009592) #33	ACAA2 (ENSPMRG00000009605) #34	MYO5B (ENSPMRG00000009756) #35	ENSPMRG00000010121	ENSPMRG00000010128
Argentine black and white tegu	MODERN SPECIES	34	SYT4 (ENSSMRG00000000987)	ENSSMRG00000000984	SETBP1 (ENSSMRG00000000927) #7	ENSSMRG00000000842 #9	ENSSMRG00000000808 #11	EPG5 (ENSSMRG00000000761) #12	PSTPIP2 (ENSSMRG00000000716) #13	ATP5F1A (ENSSMRG00000000705) #14	HAUS1 (ENSSMRG00000000673) #15	C18orf25 (ENSSMRG00000000659) #16	RNF165 (ENSSMRG00000000637) #17	LOXHD1 (ENSSMRG00000000443) #18	ST8SIA5 (ENSSMRG00000000377) #19	ENSSMRG00000000298	PIAS2 (ENSSMRG00000000256) #20	KATNAL2 (ENSSMRG00000000219) #22	HDHD2 (ENSSMRG00000000191) #23	IER3IP1 (ENSSMRG00000000137) #24	SKOR2 (ENSSMRG00000000124) #25	SMAD2 (ENSSMRG00000016595) #26	ZBTB7C (ENSSMRG00000016594) #27	ENSSMRG00000016592	CTIF (ENSSMRG00000016591) #28	SMAD7 (ENSSMRG00000016590) #29	DYM (ENSSMRG00000016587) #31	C18orf32 (ENSSMRG00000016584) #32	RPL17 (ENSSMRG00000016581)	LIPG (ENSSMRG00000016580) #33	ACAA2 (ENSSMRG00000016578) #34	MYO5B (ENSSMRG00000016569) #35	ENSSMRG00000016557
tuatara	MODERN SPECIES	631														ENSSPUG00000014537	PIAS2 (ENSSPUG00000014552) #20	KATNAL2 (ENSSPUG00000014578) #22	HDHD2 (ENSSPUG00000014604) #23	ENSSPUG00000014624 #26	ZBTB7C (ENSSPUG00000014644) #27	ENSSPUG00000014650	CTIF (ENSSPUG00000014734) #28	SMAD7 (ENSSPUG00000015295) #29
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Aves	ANCESTRAL SPECIES	4	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Neognathae	ANCESTRAL SPECIES	12	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.c.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.hb.a #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00940000167769	ENSGT00390000016167.c.b #16	ENSGT00550000074846.db #14	ENSGT00390000006029 #15	ENSGT00390000016167.d #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.hb.a #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814.b #27	ENSGT00940000153432.A.b.g #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Golden eagle	MODERN SPECIES	91	SETBP1 (ENSACCG00020016273) #7	ENSACCG00020016281 #9	ENSACCG00020016311 #9	ENSACCG00020016332 #11	EPG5 (ENSACCG00020016353) #12	PSTPIP2 (ENSACCG00020016388) #13	ATP5F1A (ENSACCG00020016399) #14	HAUS1 (ENSACCG00020016407) #15	C18orf25 (ENSACCG00020016442) #16	ENSACCG00020016448	RNF165 (ENSACCG00020016454) #17	LOXHD1 (ENSACCG00020016482) #18	ST8SIA5 (ENSACCG00020016492) #19	ENSACCG00020016495	PIAS2 (ENSACCG00020016500) #20	KATNAL2 (ENSACCG00020016503) #22	HDHD2 (ENSACCG00020016506) #23	IER3IP1 (ENSACCG00020016510) #24	SKOR2 (ENSACCG00020016513) #25	SMAD2 (ENSACCG00020016518) #26	ZBTB7C (ENSACCG00020016526) #27	CTIF (ENSACCG00020016528) #28	SMAD7 (ENSACCG00020016530) #29	DYM (ENSACCG00020016531) #31	C18orf32 (ENSACCG00020016535) #32	RPL17 (ENSACCG00020016537)	LIPG (ENSACCG00020016557) #33	ACAA2 (ENSACCG00020016573) #34	MYO5B (ENSACCG00020016656) #35	ENSACCG00020009495	ENSACCG00020009516
Kakapo	MODERN SPECIES	19	ENSSHBG00005008557 #7	ENSSHBG00005008572 #9	ENSSHBG00005008633 #9	ENSSHBG00005008642 #11	EPG5 (ENSSHBG00005008678) #12	ENSSHBG00005008791 #14	PSTPIP2 (ENSSHBG00005008805) #13	ENSSHBG00005008822	ENSSHBG00005008832 #16	ENSSHBG00005008835	RNF165 (ENSSHBG00005008844) #17	LOXHD1 (ENSSHBG00005008933) #18	ST8SIA5 (ENSSHBG00005009922) #19	ENSSHBG00005009938	ENSSHBG00005009962 #20	KATNAL2 (ENSSHBG00005010077) #22	HDHD2 (ENSSHBG00005010840) #23	IER3IP1 (ENSSHBG00005010867) #24	ENSSHBG00005010880 #25	ENSSHBG00005010919 #26	ZBTB7C (ENSSHBG00005010973) #27	ENSSHBG00005011002 #28	SMAD7 (ENSSHBG00005011025) #29	DYM (ENSSHBG00005011046) #31	C18orf32 (ENSSHBG00005011080) #32	ENSSHBG00005011099	LIPG (ENSSHBG00005011192) #33	ACAA2 (ENSSHBG00005011224) #34	MYO5B (ENSSHBG00005011309) #35	ENSSHBG00005011586	ENSSHBG00005011601
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.c.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.hb.a #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Great tit	MODERN SPECIES	642	SYT4 (ENSPMJG00000004942)	SETBP1 (ENSPMJG00000004924) #7	ENSPMJG00000004863 #9	ENSPMJG00000004854 #9	ENSPMJG00000004850 #11	EPG5 (ENSPMJG00000004806) #12	PSTPIP2 (ENSPMJG00000004774) #13	ATP5F1A (ENSPMJG00000003455) #14	HAUS1 (ENSPMJG00000003444) #15	C18orf25 (ENSPMJG00000003436) #16	RNF165 (ENSPMJG00000003419) #17	LOXHD1 (ENSPMJG00000003381) #18	ENSPMJG00000003355	ST8SIA5 (ENSPMJG00000003351) #19	PIAS2 (ENSPMJG00000003313) #20	KATNAL2 (ENSPMJG00000003284) #22	HDHD2 (ENSPMJG00000003109) #23	IER3IP1 (ENSPMJG00000003108) #24	SKOR2 (ENSPMJG00000003106) #25	SMAD2 (ENSPMJG00000002989) #26	ZBTB7C (ENSPMJG00000002973) #27	CTIF (ENSPMJG00000002914) #28	SMAD7 (ENSPMJG00000002909) #29	DYM (ENSPMJG00000002819) #31	C18orf32 (ENSPMJG00000002712) #32	ENSPMJG00000002708	LIPG (ENSPMJG00000002703) #33	ACAA2 (ENSPMJG00000002693) #34	MYO5B (ENSPMJG00000002662) #35	ENSPMJG00000002582	ENSPMJG00000002577
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.c.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.hb.a #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872.j #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Flycatcher	MODERN SPECIES	561	PIK3C3 (ENSFALG00000008849)	RIT2 (ENSFALG00000008852)	SYT4 (ENSFALG00000008854)	SETBP1 (ENSFALG00000008857) #7	ENSFALG00000008859 #9	ENSFALG00000024024 #9	ENSFALG00000008861 #11	EPG5 (ENSFALG00000008862) #12	ATP5F1A (ENSFALG00000008875) #14	HAUS1 (ENSFALG00000008884) #15	C18orf25 (ENSFALG00000008886) #16	RNF165 (ENSFALG00000023345) #17	LOXHD1 (ENSFALG00000008897) #18	ST8SIA5 (ENSFALG00000008899) #19	PIAS2 (ENSFALG00000008918) #20	KATNAL2 (ENSFALG00000008928) #22	HDHD2 (ENSFALG00000008930) #23	IER3IP1 (ENSFALG00000026006) #24	SMAD2 (ENSFALG00000008934) #26	ZBTB7C (ENSFALG00000008940) #27	ENSFALG00000028976	CTIF (ENSFALG00000024197) #28	SMAD7 (ENSFALG00000008945) #29	DYM (ENSFALG00000008953) #31	C18orf32 (ENSFALG00000008961) #32	ENSFALG00000008965	LIPG (ENSFALG00000008973) #33	ACAA2 (ENSFALG00000008979) #34	MYO5B (ENSFALG00000008996) #35	ENSFALG00000009012	ENSFALG00000002576
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.c.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.hb.a #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872.j #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Passeroidea	ANCESTRAL SPECIES	27	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.c.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b.hb.a #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872.j #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Zebra finch	MODERN SPECIES	104															PIAS2 (ENSTGUG00000000006) #20	KATNAL2 (ENSTGUG00000000013) #22	HDHD2 (ENSTGUG00000028684) #23	IER3IP1 (ENSTGUG00000028694) #24	ENSTGUG00000014263 #25	SMAD2 (ENSTGUG00000000016) #26	ZBTB7C (ENSTGUG00000000028) #27	CTIF (ENSTGUG00000000030) #28	SMAD7 (ENSTGUG00000000034) #29	DYM (ENSTGUG00000000035) #31	ENSTGUG00000000043	RPL17 (ENSTGUG00000028072)	ENSTGUG00000028962	ENSTGUG00000000071	ENSTGUG00000000072	ENSTGUG00000018125	MYO5B (ENSTGUG00000000053) #35
Common canary	MODERN SPECIES	32	RIT2 (ENSSCAG00000016353)	SYT4 (ENSSCAG00000016351)	SETBP1 (ENSSCAG00000016346) #7	ENSSCAG00000016338 #9	ENSSCAG00000016329 #9	ENSSCAG00000016324 #11	EPG5 (ENSSCAG00000016319) #12	PSTPIP2 (ENSSCAG00000016312) #13	ENSSCAG00000016307 #14	HAUS1 (ENSSCAG00000016303) #15	ENSSCAG00000016301 #16	RNF165 (ENSSCAG00000016296) #17	LOXHD1 (ENSSCAG00000016279) #18	ST8SIA5 (ENSSCAG00000016270) #19	ENSSCAG00000016263 #20	KATNAL2 (ENSSCAG00000016261) #22	HDHD2 (ENSSCAG00000016258) #23	IER3IP1 (ENSSCAG00000016254) #24	ENSSCAG00000016249 #26	ZBTB7C (ENSSCAG00000016243) #27	ENSSCAG00000016237 #28	SMAD7 (ENSSCAG00000016234) #29	DYM (ENSSCAG00000016230) #31	ENSSCAG00000016226 #32	ENSSCAG00000016220	LIPG (ENSSCAG00000016215) #33	ACAA2 (ENSSCAG00000016211) #34	MYO5B (ENSSCAG00000015157) #35	ENSSCAG00000014412	ENSSCAG00000014408	ENSSCAG00000014403
Medium ground finch	MODERN SPECIES	68	RIT2 (ENSGFOG00000012761)	SYT4 (ENSGFOG00000012768)	SETBP1 (ENSGFOG00000012775) #7	ENSGFOG00000012786 #9	ENSGFOG00000012800 #11	EPG5 (ENSGFOG00000012823) #12	PSTPIP2 (ENSGFOG00000012952) #13	ENSGFOG00000012961 #14	HAUS1 (ENSGFOG00000012970) #15	ENSGFOG00000012973 #16	ENSGFOG00000012977	RNF165 (ENSGFOG00000012981) #17	LOXHD1 (ENSGFOG00000012988) #18	ST8SIA5 (ENSGFOG00000013005) #19	ENSGFOG00000013009 #20	KATNAL2 (ENSGFOG00000013015) #22	HDHD2 (ENSGFOG00000013020) #23	IER3IP1 (ENSGFOG00000013022) #24	ENSGFOG00000013025 #26	ZBTB7C (ENSGFOG00000013033) #27	CTIF (ENSGFOG00000013039) #28	SMAD7 (ENSGFOG00000013050) #29	DYM (ENSGFOG00000013055) #31	ENSGFOG00000013074 #32	ENSGFOG00000013078	LIPG (ENSGFOG00000013083) #33	ACAA2 (ENSGFOG00000013087) #34	MYO5B (ENSGFOG00000013103) #35	ENSGFOG00000013164	ENSGFOG00000013168	ENSGFOG00000013172
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Anatidae	ANCESTRAL SPECIES	55	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.c #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Duck	MODERN SPECIES	4281	SETBP1 (ENSAPLG00000017129) #7	ENSAPLG00000012208 #9	ENSAPLG00000024359 #9	ENSAPLG00000024300 #11	EPG5 (ENSAPLG00000011964) #12	PSTPIP2 (ENSAPLG00000011930) #13	ATP5F1A (ENSAPLG00000011512) #14	HAUS1 (ENSAPLG00000011232) #15	C18orf25 (ENSAPLG00000017723) #16	RNF165 (ENSAPLG00000006619) #17	ENSAPLG00000018736	LOXHD1 (ENSAPLG00000010718) #18	ST8SIA5 (ENSAPLG00000011069) #19	ENSAPLG00000022068	PIAS2 (ENSAPLG00000005190) #20	KATNAL2 (ENSAPLG00000005005) #22	HDHD2 (ENSAPLG00000004974) #23	IER3IP1 (ENSAPLG00000018295) #24	SKOR2 (ENSAPLG00000022487) #25	SMAD2 (ENSAPLG00000004964) #26	ZBTB7C (ENSAPLG00000016660) #27	CTIF (ENSAPLG00000014486) #28	SMAD7 (ENSAPLG00000001268) #29	ENSAPLG00000022343	DYM (ENSAPLG00000007759) #31	C18orf32 (ENSAPLG00000017090) #32	ENSAPLG00000008451	LIPG (ENSAPLG00000008809) #33	ACAA2 (ENSAPLG00000006058) #34	MYO5B (ENSAPLG00000005427) #35	ENSAPLG00000005297
Pink-footed goose	MODERN SPECIES	346											C18orf25 (ENSABRG00000019430) #16	RNF165 (ENSABRG00000019433) #17	ENSABRG00000019443 #18	ST8SIA5 (ENSABRG00000019447) #19	PIAS2 (ENSABRG00000019457) #20	KATNAL2 (ENSABRG00000019473) #22	ENSABRG00000019488
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d.a.b #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872.k #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000162144
Japanese quail	MODERN SPECIES	699	PIK3C3 (ENSCJPG00005005375)	RIT2 (ENSCJPG00005005369)	SYT4 (ENSCJPG00005005351)	SETBP1 (ENSCJPG00005005325) #7	ENSCJPG00005005294 #9	ENSCJPG00005005293 #11	EPG5 (ENSCJPG00005005256) #12	PSTPIP2 (ENSCJPG00005005209) #13	ATP5F1A (ENSCJPG00005005208) #14	HAUS1 (ENSCJPG00005005206) #15	C18orf25 (ENSCJPG00005005205) #16	RNF165 (ENSCJPG00005005197) #17	LOXHD1 (ENSCJPG00005005160) #18	ST8SIA5 (ENSCJPG00005005152) #19	PIAS2 (ENSCJPG00005004954) #20	KATNAL2 (ENSCJPG00005004948) #22	HDHD2 (ENSCJPG00005004947) #23	IER3IP1 (ENSCJPG00005004943) #24	SKOR2 (ENSCJPG00005004937) #25	SMAD2 (ENSCJPG00005004935) #26	ZBTB7C (ENSCJPG00005004933) #27	CTIF (ENSCJPG00005004929) #28	SMAD7 (ENSCJPG00005004928) #29	DYM (ENSCJPG00005004924) #31	C18orf32 (ENSCJPG00005004922) #32	ENSCJPG00005004917	LIPG (ENSCJPG00005004913) #33	ACAA2 (ENSCJPG00005004912) #34	LMAN1 (ENSCJPG00005004911)	CPLX4 (ENSCJPG00005004910)	RAX (ENSCJPG00005004909)
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846.eb.b #14	ENSGT00390000006029 #15	ENSGT00390000016167.a #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a.d.a.b #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872.k #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.a.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000162144
Chicken	MODERN SPECIES	131	RIT2 (ENSGALG00010012204)	SYT4 (ENSGALG00010012160)	SETBP1 (ENSGALG00010012148) #7	ENSGALG00010012134 #9	ENSGALG00010012131 #9	ENSGALG00010012126 #11	EPG5 (ENSGALG00010012119) #12	PSTPIP2 (ENSGALG00010012108) #13	ATP5F1AZ (ENSGALG00010012088) #14	HAUS1 (ENSGALG00010012082) #15	CZH18ORF25 (ENSGALG00010012067) #16	RNF165 (ENSGALG00010012051) #17	LOXHD1 (ENSGALG00010012046) #18	ST8SIA5 (ENSGALG00010009858) #19	PIAS2 (ENSGALG00010009774) #20	KATNAL2 (ENSGALG00010011422) #22	HDHD2 (ENSGALG00010012845) #23	IER3IP1 (ENSGALG00010011367) #24	SKOR2 (ENSGALG00010011268) #25	SMAD2 (ENSGALG00010010623) #26	ZBTB7C (ENSGALG00010010049) #27	CTIF (ENSGALG00010010007) #28	SMAD7 (ENSGALG00010009910) #29	DYM (ENSGALG00010010922) #31	ENSGALG00010011203 #32	RPL17 (ENSGALG00010011192)	LIPG (ENSGALG00010009013) #33	ACAA2 (ENSGALG00010010463) #34	LMAN1L (ENSGALG00010010445)	CPLX4 (ENSGALG00010010415)	RAX (ENSGALG00010010409)
Turkey	MODERN SPECIES	1299	PIK3C3 (ENSMGAG00000009060)	SYT4 (ENSMGAG00000001587)	SETBP1 (ENSMGAG00000009445) #7	ENSMGAG00000009227 #9	ENSMGAG00000009233 #9	ENSMGAG00000001401 #11	EPG5 (ENSMGAG00000001532) #12	PSTPIP2 (ENSMGAG00000001515) #13	ENSMGAG00000009963 #14	HAUS1 (ENSMGAG00000001559) #15	C18orf25 (ENSMGAG00000021854) #16	RNF165 (ENSMGAG00000001405) #17	LOXHD1 (ENSMGAG00000016776) #18	ST8SIA5 (ENSMGAG00000016483) #19	ENSMGAG00000001384 #20	KATNAL2 (ENSMGAG00000004476) #22	HDHD2 (ENSMGAG00000004803) #23	IER3IP1 (ENSMGAG00000020998) #24	SMAD2 (ENSMGAG00000001351) #26	ZBTB7C (ENSMGAG00000001366) #27	CTIF (ENSMGAG00000021290) #28	ENSMGAG00000022342	SEC11C (ENSMGAG00000001165)	ENSMGAG00000001162	MALT1 (ENSMGAG00000001082)	ENSMGAG00000001342	ALPK2 (ENSMGAG00000018725)	ENSMGAG00000021263	NEDD4L (ENSMGAG00000000935)	ENSMGAG00000001140	ENSMGAG00000001102
African ostrich	MODERN SPECIES	306	RIT2 (ENSSCUG00000001756)	SYT4 (ENSSCUG00000001753)	SETBP1 (ENSSCUG00000001747) #7	ENSSCUG00000001742 #9	ENSSCUG00000001740 #11	EPG5 (ENSSCUG00000001722) #12	PSTPIP2 (ENSSCUG00000001712) #13	ATP5F1A (ENSSCUG00000001706) #14	HAUS1 (ENSSCUG00000001700) #15	C18orf25 (ENSSCUG00000001690) #16	RNF165 (ENSSCUG00000001684) #17	LOXHD1 (ENSSCUG00000001676) #18	ST8SIA5 (ENSSCUG00000001666) #19	ENSSCUG00000001625	PIAS2 (ENSSCUG00000001592) #20	KATNAL2 (ENSSCUG00000001589) #22	HDHD2 (ENSSCUG00000001588) #23	IER3IP1 (ENSSCUG00000001587) #24	SMAD2 (ENSSCUG00000001582) #26	ZBTB7C (ENSSCUG00000001580) #27	CTIF (ENSSCUG00000001577) #28	SMAD7 (ENSSCUG00000001575) #29	ENSSCUG00000001573	DYM (ENSSCUG00000001566) #31	C18orf32 (ENSSCUG00000001562) #32	ENSSCUG00000001555	LIPG (ENSSCUG00000001552) #33	ACAA2 (ENSSCUG00000001545) #34	MYO5B (ENSSCUG00000001541) #35	ENSSCUG00000001539	ENSSCUG00000001536
Australian saltwater crocodile	MODERN SPECIES	29	ENSCPRG00005014968	ENSCPRG00005014964 #9	ENSCPRG00005014958 #9	ENSCPRG00005014943 #11	EPG5 (ENSCPRG00005014928) #12	PSTPIP2 (ENSCPRG00005014911) #13	ATP5F1A (ENSCPRG00005014898) #14	HAUS1 (ENSCPRG00005014890) #15	C18orf25 (ENSCPRG00005014887) #16	RNF165 (ENSCPRG00005014878) #17	LOXHD1 (ENSCPRG00005014818) #18	ST8SIA5 (ENSCPRG00005014802) #19	ENSCPRG00005014800	ENSCPRG00005014797	PIAS2 (ENSCPRG00005014791) #20	KATNAL2 (ENSCPRG00005014784) #22	HDHD2 (ENSCPRG00005014780) #23	IER3IP1 (ENSCPRG00005014776) #24	SMAD2 (ENSCPRG00005014766) #26	ZBTB7C (ENSCPRG00005014760) #27	CTIF (ENSCPRG00005014748) #28	SMAD7 (ENSCPRG00005014735) #29	DYM (ENSCPRG00005014651) #31	C18orf32 (ENSCPRG00005014637) #32	ENSCPRG00005014628	LIPG (ENSCPRG00005014622) #33	ACAA2 (ENSCPRG00005014619) #34	ENSCPRG00005014614 #35	ENSCPRG00005014610	ENSCPRG00005014216 #35	ME2 (ENSCPRG00005014168)
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E.n #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c.a #9	ENSGT00390000018729.a.c.b #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E.n #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c.a #9	ENSGT00390000018729.a.c.b #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E.n #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
painted turtle	MODERN SPECIES	15	SETBP1 (ENSCPBG00000025743) #7	ENSCPBG00000025740 #9	ENSCPBG00000025738 #9	ENSCPBG00000025736	ENSCPBG00000025735 #11	EPG5 (ENSCPBG00000025732) #12	PSTPIP2 (ENSCPBG00000025723) #13	ATP5F1A (ENSCPBG00000025716) #14	HAUS1 (ENSCPBG00000025713) #15	C18orf25 (ENSCPBG00000025709) #16	RNF165 (ENSCPBG00000025704) #17	LOXHD1 (ENSCPBG00000025693) #18	ST8SIA5 (ENSCPBG00000025690) #19	ENSCPBG00000025689	PIAS2 (ENSCPBG00000025688) #20	KATNAL2 (ENSCPBG00000025685) #22	HDHD2 (ENSCPBG00000025683) #23	IER3IP1 (ENSCPBG00000025681) #24	SKOR2 (ENSCPBG00000025680) #25	SMAD2 (ENSCPBG00000025672) #26	ZBTB7C (ENSCPBG00000025669) #27	CTIF (ENSCPBG00000025654) #28	SMAD7 (ENSCPBG00000025649) #29	DYM (ENSCPBG00000025646) #31	C18orf32 (ENSCPBG00000025643) #32	ENSCPBG00000025638	LIPG (ENSCPBG00000025633) #33	ACAA2 (ENSCPBG00000025630) #34	MYO5B (ENSCPBG00000025623) #35	ENSCPBG00000025621	ENSCPBG00000025620
Three-toed box turtle	MODERN SPECIES	29	ENSTMTG00000000935 #9	ENSTMTG00000000956 #9	ENSTMTG00000000964 #11	EPG5 (ENSTMTG00000000989) #12	PSTPIP2 (ENSTMTG00000001028) #13	ATP5F1A (ENSTMTG00000001043) #14	HAUS1 (ENSTMTG00000001059) #15	ENSTMTG00000001068	C18orf25 (ENSTMTG00000001078) #16	ENSTMTG00000001086	RNF165 (ENSTMTG00000001099) #17	LOXHD1 (ENSTMTG00000001168) #18	ST8SIA5 (ENSTMTG00000001323) #19	ENSTMTG00000001347	PIAS2 (ENSTMTG00000001368) #20	KATNAL2 (ENSTMTG00000001412) #22	HDHD2 (ENSTMTG00000001421) #23	IER3IP1 (ENSTMTG00000001428) #24	SKOR2 (ENSTMTG00000001437) #25	SMAD2 (ENSTMTG00000001451) #26	ZBTB7C (ENSTMTG00000001470) #27	CTIF (ENSTMTG00000001480) #28	SMAD7 (ENSTMTG00000001490) #29	ENSTMTG00000001494	DYM (ENSTMTG00000001505) #31	C18orf32 (ENSTMTG00000001516) #32	ENSTMTG00000001521	LIPG (ENSTMTG00000001568) #33	ACAA2 (ENSTMTG00000001632) #34	MYO5B (ENSTMTG00000001656) #35	ENSTMTG00000001691
Testudinidae	ANCESTRAL SPECIES	30	ENSGT00940000159026	ENSGT00940000158784 #7	ENSGT00390000018729.a.c.a #9	ENSGT00390000018729.a.c.b #9	ENSGT00390000018729.a.d #9	ENSGT01080000257333.E.n #11	ENSGT00390000007354 #12	ENSGT00940000158788 #13	ENSGT00550000074846 #14	ENSGT00390000006029 #15	ENSGT00390000016167 #16	ENSGT00940000156997 #17	ENSGT00390000018830 #18	ENSGT01030000234535.C #19	ENSGT01030000234539.a.a.b.b #20	ENSGT00940000157302 #22	ENSGT00940000155805 #23	ENSGT00510000047648 #24	ENSGT00940000160474 #25	ENSGT00940000153499.a #26	ENSGT00940000159814 #27	ENSGT00940000153432.A.b #28	ENSGT00940000159872 #29	ENSGT00390000008772 #31	ENSGT00390000018741 #32	ENSGT00950000183010.a.b.b	ENSGT00940000159394 #33	ENSGT01030000234626.D #34	ENSGT00940000155402.a.b #35	ENSGT01030000235140	ENSGT00940000164634
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005006281 #9	ENSGEVG00005006248 #9	ENSGEVG00005020179 #9	ENSGEVG00005020174 #11	EPG5 (ENSGEVG00005020148) #12	PSTPIP2 (ENSGEVG00005020128) #13	ATP5F1A (ENSGEVG00005020124) #14	ENSGEVG00005020123	HAUS1 (ENSGEVG00005020111) #15	C18orf25 (ENSGEVG00005020108) #16	ENSGEVG00005020105	LOXHD1 (ENSGEVG00005020075) #18	ST8SIA5 (ENSGEVG00005020035) #19	ENSGEVG00005019963	PIAS2 (ENSGEVG00005019940) #20	KATNAL2 (ENSGEVG00005019929) #22	HDHD2 (ENSGEVG00005019914) #23	IER3IP1 (ENSGEVG00005019910) #24	SKOR2 (ENSGEVG00005019904) #25	SMAD2 (ENSGEVG00005019888) #26	ENSGEVG00005019880	ZBTB7C (ENSGEVG00005019877) #27	ENSGEVG00005019871	CTIF (ENSGEVG00005019849) #28	SMAD7 (ENSGEVG00005019841) #29	DYM (ENSGEVG00005019836) #31	C18orf32 (ENSGEVG00005019829) #32	ENSGEVG00005019793	LIPG (ENSGEVG00005019740) #33	ACAA2 (ENSGEVG00005019715) #34	MYO5B (ENSGEVG00005019665) #35
Abingdon island giant tortoise	MODERN SPECIES	2042													ST8SIA5 (ENSCABG00000020667) #19	ENSCABG00000020668	PIAS2 (ENSCABG00000020669) #20	KATNAL2 (ENSCABG00000020670) #22	HDHD2 (ENSCABG00000020673) #23	IER3IP1 (ENSCABG00000020676) #24	SMAD2 (ENSCABG00000020680) #26	ZBTB7C (ENSCABG00000020683) #27
Chinese turtle	MODERN SPECIES	2138	RIT2 (ENSPSIG00000012276)	SYT4 (ENSPSIG00000012268)	SETBP1 (ENSPSIG00000012250) #7	ENSPSIG00000012220	ENSPSIG00000011549 #9	ENSPSIG00000011149 #11	EPG5 (ENSPSIG00000010110) #12	PSTPIP2 (ENSPSIG00000009919) #13	ATP5F1A (ENSPSIG00000009091) #14	HAUS1 (ENSPSIG00000009054) #15	C18orf25 (ENSPSIG00000009048) #16	RNF165 (ENSPSIG00000008948) #17	ENSPSIG00000008936 #18	ST8SIA5 (ENSPSIG00000007901) #19	PIAS2 (ENSPSIG00000007898) #20	KATNAL2 (ENSPSIG00000007746) #22	HDHD2 (ENSPSIG00000007538) #23	SMAD2 (ENSPSIG00000006646) #26	ZBTB7C (ENSPSIG00000006571) #27	ENSPSIG00000000589	ENSPSIG00000006540	ENSPSIG00000006516	CTIF (ENSPSIG00000006508) #28	SMAD7 (ENSPSIG00000006254) #29	DYM (ENSPSIG00000005625) #31	C18orf32 (ENSPSIG00000005560) #32	ENSPSIG00000005516	LIPG (ENSPSIG00000005431) #33	ACAA2 (ENSPSIG00000005335) #34	MYO5B (ENSPSIG00000005153) #35	ENSPSIG00000017286