Mus	ANCESTRAL SPECIES	3	ENSGT00940000158635	ENSGT00940000159124	ENSGT00940000156130.b	ENSGT00390000000742	ENSGT00390000018710	ENSGT00390000011717	ENSGT00940000156908	ENSGT00940000154977	ENSGT00940000157063	ENSGT00950000182878.b.a.c.a.b	ENSGT00700000106212	ENSGT00390000008325.b.b	ENSGT00940000155268	ENSGT00940000156118	ENSGT00940000160438 #20	ENSGT00950000182978.A.a.b.a #22	ENSGT01090000260093.a	ENSGT00390000001710	ENSGT00510000046470.a.a.a.d.a	ENSGT00950000183021.a.a.b	ENSGT00940000159454	ENSGT01080000257410.B.a	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.d	ENSGT00550000074850	ENSGT00940000158260	ENSGT00940000162447
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000158635	ENSGT00940000159124	ENSGT00940000156130.b	ENSGT00390000000742	ENSGT00390000018710	ENSGT00390000011717	ENSGT00940000156908	ENSGT00940000154977	ENSGT00940000157063	ENSGT00950000182878.b.a.c.a.b	ENSGT00700000106212	ENSGT00390000008325.b.b	ENSGT00940000155268	ENSGT00940000156118	ENSGT00940000160438 #20	ENSGT00950000182978.A.a.b.a #22	ENSGT01090000260093.a	ENSGT00390000001710	ENSGT00510000046470.a.a.a.d.a	ENSGT00950000183021.a.a.b	ENSGT00940000159454	ENSGT01080000257410.B.a	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.d	ENSGT00550000074850	ENSGT00940000158260	ENSGT00940000162447
Mus_B	ANCESTRAL SPECIES	21	ENSGT00940000158635	ENSGT00940000159124	ENSGT00940000156130.b	ENSGT00390000000742	ENSGT00390000018710	ENSGT00390000011717	ENSGT00940000156908	ENSGT00940000154977	ENSGT00940000157063	ENSGT00950000182878.b.a.c.a.b	ENSGT00700000106212	ENSGT00390000008325.b.b	ENSGT00940000155268	ENSGT00940000156118	ENSGT00940000160438 #20	ENSGT00950000182978.A.a.b.a #22	ENSGT01090000260093.a	ENSGT00390000001710	ENSGT00510000046470.a.a.a.d.a	ENSGT00950000183021.a.a.b	ENSGT00940000159454	ENSGT01080000257410.B.a	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.d	ENSGT00550000074850	ENSGT00940000158260	ENSGT00940000162447
Mus_C	ANCESTRAL SPECIES	33														ENSGT00940000156118	ENSGT00940000160438 #20	ENSGT00950000182978.A.a.b.a #22	ENSGT01090000260093.a	ENSGT00390000001710	ENSGT00510000046470.a.a.a.d.a	ENSGT00950000183021.a.a.b	ENSGT00940000159454	ENSGT01080000257410.B.a	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.d	ENSGT00550000074850	ENSGT00940000158260	ENSGT00940000162447
Steppe mouse	MODERN SPECIES	2514														Msc (ENSMSIG00000004033) #20	ENSMSIG00000004046 #21	Eya1 (ENSMSIG00000004087) #22
spretus	MODERN SPECIES		Jph1 (MGP_SPRETEiJ_G0014777)	Ly96 (MGP_SPRETEiJ_G0014776)	Tmem70 (MGP_SPRETEiJ_G0014775)	Eloc (MGP_SPRETEiJ_G0014774)	MGP_SPRETEiJ_G0014773	Stau2 (MGP_SPRETEiJ_G0014772)	Rdh10 (MGP_SPRETEiJ_G0014771)	Rpl7 (MGP_SPRETEiJ_G0014770)	4930444P10Rik (MGP_SPRETEiJ_G0014769)	Sbspon (MGP_SPRETEiJ_G0014768)	Terf1 (MGP_SPRETEiJ_G0014767)	Kcnb2 (MGP_SPRETEiJ_G0014766)	MGP_SPRETEiJ_G0014765	Trpa1 (MGP_SPRETEiJ_G0014764)	Msc (MGP_SPRETEiJ_G0014763) #20	Eya1 (MGP_SPRETEiJ_G0014762) #22	Xkr9 (MGP_SPRETEiJ_G0014761)	Lactb2 (MGP_SPRETEiJ_G0014760)	Tram1 (MGP_SPRETEiJ_G0014759)	Ncoa2 (MGP_SPRETEiJ_G0014758)	Prdm14 (MGP_SPRETEiJ_G0014757)	Slco5a1 (MGP_SPRETEiJ_G0014756)	Sulf1 (MGP_SPRETEiJ_G0014755)	MGP_SPRETEiJ_G0014754	A830018L16Rik (MGP_SPRETEiJ_G0014753)	Prex2 (MGP_SPRETEiJ_G0014752)	Cpa6 (MGP_SPRETEiJ_G0014751)	Arfgef1 (MGP_SPRETEiJ_G0014750)	MGP_SPRETEiJ_G0014749	Cops5 (MGP_SPRETEiJ_G0014748)	Ppp1r42 (MGP_SPRETEiJ_G0014747)
Mouse	MODERN SPECIES		Gdap1 (ENSMUSG00000025777)	Jph1 (ENSMUSG00000042686)	Ly96 (ENSMUSG00000025779)	Tmem70 (ENSMUSG00000025940)	Eloc (ENSMUSG00000079658)	Ube2w (ENSMUSG00000025939)	Stau2 (ENSMUSG00000025920)	Rdh10 (ENSMUSG00000025921)	Rpl7 (ENSMUSG00000043716)	4930444P10Rik (ENSMUSG00000067795)	Sbspon (ENSMUSG00000032719)	Terf1 (ENSMUSG00000025925)	Kcnb2 (ENSMUSG00000092083)	Trpa1 (ENSMUSG00000032769)	Msc (ENSMUSG00000025930) #20	Eya1 (ENSMUSG00000025932) #22	Xkr9 (ENSMUSG00000067813)	Lactb2 (ENSMUSG00000025937)	Tram1 (ENSMUSG00000025935)	Ncoa2 (ENSMUSG00000005886)	Prdm14 (ENSMUSG00000042414)	Slco5a1 (ENSMUSG00000025938)	Sulf1 (ENSMUSG00000016918)	A830018L16Rik (ENSMUSG00000057715)	Prex2 (ENSMUSG00000048960)	Cpa6 (ENSMUSG00000042501)	Arfgef1 (ENSMUSG00000067851)	Cspp1 (ENSMUSG00000056763)	Cops5 (ENSMUSG00000025917)	Ppp1r42 (ENSMUSG00000025916)	Tcf24 (ENSMUSG00000099032)
Ryukyu mouse	MODERN SPECIES		Gdap1 (MGP_CAROLIEiJ_G0013973)	Jph1 (MGP_CAROLIEiJ_G0013972)	Ly96 (MGP_CAROLIEiJ_G0013971)	Tmem70 (MGP_CAROLIEiJ_G0013970)	Eloc (MGP_CAROLIEiJ_G0013969)	MGP_CAROLIEiJ_G0013968	Stau2 (MGP_CAROLIEiJ_G0013967)	Rdh10 (MGP_CAROLIEiJ_G0013966)	Rpl7 (MGP_CAROLIEiJ_G0013965)	4930444P10Rik (MGP_CAROLIEiJ_G0013964)	Sbspon (MGP_CAROLIEiJ_G0013963)	Terf1 (MGP_CAROLIEiJ_G0013962)	Kcnb2 (MGP_CAROLIEiJ_G0013961)	Trpa1 (MGP_CAROLIEiJ_G0013960)	Msc (MGP_CAROLIEiJ_G0013959) #20	Eya1 (MGP_CAROLIEiJ_G0013958) #22	Xkr9 (MGP_CAROLIEiJ_G0013957)	Lactb2 (MGP_CAROLIEiJ_G0013956)	Tram1 (MGP_CAROLIEiJ_G0013955)	Ncoa2 (MGP_CAROLIEiJ_G0013954)	Prdm14 (MGP_CAROLIEiJ_G0013953)	Slco5a1 (MGP_CAROLIEiJ_G0013952)	Sulf1 (MGP_CAROLIEiJ_G0013951)	A830018L16Rik (MGP_CAROLIEiJ_G0013950)	Prex2 (MGP_CAROLIEiJ_G0013949)	Cpa6 (MGP_CAROLIEiJ_G0013948)	Arfgef1 (MGP_CAROLIEiJ_G0013947)	Cspp1 (MGP_CAROLIEiJ_G0013946)	Cops5 (MGP_CAROLIEiJ_G0013945)	Ppp1r42 (MGP_CAROLIEiJ_G0013944)	Tcf24 (MGP_CAROLIEiJ_G0013943)
Shrew mouse	MODERN SPECIES	14	Gdap1 (MGP_PahariEiJ_G0023846)	Jph1 (MGP_PahariEiJ_G0023847)	Ly96 (MGP_PahariEiJ_G0023848)	Tmem70 (MGP_PahariEiJ_G0023849)	MGP_PahariEiJ_G0023850	MGP_PahariEiJ_G0023851	Stau2 (MGP_PahariEiJ_G0023852)	Rdh10 (MGP_PahariEiJ_G0023853)	Rpl7 (MGP_PahariEiJ_G0023854)	MGP_PahariEiJ_G0023855	Sbspon (MGP_PahariEiJ_G0023856)	Terf1 (MGP_PahariEiJ_G0023857)	Kcnb2 (MGP_PahariEiJ_G0023858)	Trpa1 (MGP_PahariEiJ_G0023859)	Msc (MGP_PahariEiJ_G0023860) #20	Eya1 (MGP_PahariEiJ_G0023861) #22	Xkr9 (MGP_PahariEiJ_G0023862)	Lactb2 (MGP_PahariEiJ_G0023863)	Tram1 (MGP_PahariEiJ_G0023864)	Ncoa2 (MGP_PahariEiJ_G0023865)	Prdm14 (MGP_PahariEiJ_G0023866)	Slco5a1 (MGP_PahariEiJ_G0023867)	Sulf1 (MGP_PahariEiJ_G0023868)	A830018L16Rik (MGP_PahariEiJ_G0023869)	Prex2 (MGP_PahariEiJ_G0023870)	Cpa6 (MGP_PahariEiJ_G0023871)	Arfgef1 (MGP_PahariEiJ_G0023872)	Cspp1 (MGP_PahariEiJ_G0023873)	Cops5 (MGP_PahariEiJ_G0023874)	Ppp1r42 (MGP_PahariEiJ_G0023875)	Tcf24 (MGP_PahariEiJ_G0023876)