Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00390000000062.x.b	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Glires	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Rodentia	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162426 #37
Long-tailed chinchilla	MODERN SPECIES	287					ENSCLAG00000002477 #11	ZFP92 (ENSCLAG00000002658) #12	TREX2 (ENSCLAG00000002698) #13	HAUS7 (ENSCLAG00000002789) #14	BGN (ENSCLAG00000003040) #15	ATP2B3 (ENSCLAG00000006386) #16	CCNQ (ENSCLAG00000008202) #17	DUSP9 (ENSCLAG00000008316) #18	PNCK (ENSCLAG00000002167) #19	ENSCLAG00000002550 #20	BCAP31 (ENSCLAG00000002843) #21	ABCD1 (ENSCLAG00000001650) #22	PLXNB3 (ENSCLAG00000001828) #23	SRPK3 (ENSCLAG00000001932) #24	IDH3G (ENSCLAG00000002456) #25	SSR4 (ENSCLAG00000002670) #26	PDZD4 (ENSCLAG00000002707) #27	L1CAM (ENSCLAG00000001453) #28	AVPR2 (ENSCLAG00000002650) #29	ENSCLAG00000001334 #30	NAA10 (ENSCLAG00000001427) #31	RENBP (ENSCLAG00000003810) #32	HCFC1 (ENSCLAG00000004175) #33	IRAK1 (ENSCLAG00000006192) #34	MECP2 (ENSCLAG00000001648) #35	ENSCLAG00000001715 #36	TKTL1 (ENSCLAG00000001825) #37
Degu	MODERN SPECIES	259	ENSODEG00000003691	GABRQ (ENSODEG00000003646)	ENSODEG00000003612	NSDHL (ENSODEG00000003563)	ENSODEG00000003535 #11	ZFP92 (ENSODEG00000003508) #12	TREX2 (ENSODEG00000019142) #13	HAUS7 (ENSODEG00000003475) #14	BGN (ENSODEG00000003451) #15	ATP2B3 (ENSODEG00000003358) #16	CCNQ (ENSODEG00000003285) #17	DUSP9 (ENSODEG00000003261) #18	PNCK (ENSODEG00000003252) #19	ENSODEG00000003207 #20	BCAP31 (ENSODEG00000003174) #21	ABCD1 (ENSODEG00000003127) #22	PLXNB3 (ENSODEG00000002965) #23	SRPK3 (ENSODEG00000002869) #24	IDH3G (ENSODEG00000002774) #25	SSR4 (ENSODEG00000002732) #26	PDZD4 (ENSODEG00000005482) #27	L1CAM (ENSODEG00000005259) #28	ENSODEG00000005204	AVPR2 (ENSODEG00000005166) #29	ARHGAP4 (ENSODEG00000005124) #30	ENSODEG00000005100 #31	RENBP (ENSODEG00000005065) #32	HCFC1 (ENSODEG00000004823) #33	IRAK1 (ENSODEG00000004583) #34	MECP2 (ENSODEG00000004523) #35	ENSODEG00000004516
Guinea pig	MODERN SPECIES	148				ENSCPOG00000037160	ENSCPOG00000011291 #11	ENSCPOG00000020829	ZFP92 (ENSCPOG00000006654) #12	TREX2 (ENSCPOG00000025702) #13	HAUS7 (ENSCPOG00000007497) #14	BGN (ENSCPOG00000023628) #15	ATP2B3 (ENSCPOG00000005102) #16	CCNQ (ENSCPOG00000009250) #17	DUSP9 (ENSCPOG00000000114) #18	ENSCPOG00000011710 #20	BCAP31 (ENSCPOG00000008510) #21	ABCD1 (ENSCPOG00000011702) #22	PLXNB3 (ENSCPOG00000006868) #23	SRPK3 (ENSCPOG00000006881) #24	IDH3G (ENSCPOG00000006890) #25	SSR4 (ENSCPOG00000006898) #26	PDZD4 (ENSCPOG00000019482) #27	L1CAM (ENSCPOG00000005519) #28	AVPR2 (ENSCPOG00000012697) #29	ENSCPOG00000026143 #30	NAA10 (ENSCPOG00000011495) #31	ENSCPOG00000024784 #32	IRAK1 (ENSCPOG00000039151) #34	MECP2 (ENSCPOG00000012579) #35	ENSCPOG00000011198 #36	ENSCPOG00000021789	TKTL1 (ENSCPOG00000011767) #37
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000000219	ENSHGLG00000035866	ENSHGLG00000032270	ENSHGLG00000046068 #11	ENSHGLG00000045727	ENSHGLG00000035589 #12	TREX2 (ENSHGLG00000008010) #13	HAUS7 (ENSHGLG00000002908) #14	BGN (ENSHGLG00000004010) #15	ATP2B3 (ENSHGLG00000000642) #16	CCNQ (ENSHGLG00000003517) #17	DUSP9 (ENSHGLG00000004236) #18	PNCK (ENSHGLG00000006098) #19	ENSHGLG00000037294 #20	BCAP31 (ENSHGLG00000000710) #21	ABCD1 (ENSHGLG00000001000) #22	PLXNB3 (ENSHGLG00000002203) #23	IDH3G (ENSHGLG00000000443) #25	SSR4 (ENSHGLG00000001720) #26	PDZD4 (ENSHGLG00000001939) #27	L1CAM (ENSHGLG00000003403) #28	AVPR2 (ENSHGLG00000006784) #29	ARHGAP4 (ENSHGLG00000000857) #30	NAA10 (ENSHGLG00000002773) #31	RENBP (ENSHGLG00000009835) #32	HCFC1 (ENSHGLG00000001143) #33	IRAK1 (ENSHGLG00000002116) #34	MECP2 (ENSHGLG00000000899) #35	ENSHGLG00000043472	TKTL1 (ENSHGLG00000042978) #37	RPL10 (ENSHGLG00000002349)
Sciuridae	ANCESTRAL SPECIES	27	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Marmotini	ANCESTRAL SPECIES	83				ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Marmotini_b	ANCESTRAL SPECIES	124				ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Squirrel	MODERN SPECIES	409		ENSSTOG00000032558	ZNF275 (ENSSTOG00000022633)	ENSSTOG00000033034	ENSSTOG00000029369	ZFP92 (ENSSTOG00000009126) #12	TREX2 (ENSSTOG00000027213) #13	HAUS7 (ENSSTOG00000022988) #14	BGN (ENSSTOG00000008058) #15	ATP2B3 (ENSSTOG00000008068) #16	CCNQ (ENSSTOG00000008103) #17	DUSP9 (ENSSTOG00000008115) #18	PNCK (ENSSTOG00000008119) #19	ENSSTOG00000026886 #20	BCAP31 (ENSSTOG00000008138) #21	ABCD1 (ENSSTOG00000008153) #22	ENSSTOG00000008188	PLXNB3 (ENSSTOG00000008197) #23	SRPK3 (ENSSTOG00000008233) #24	IDH3G (ENSSTOG00000008261) #25	SSR4 (ENSSTOG00000008278) #26	PDZD4 (ENSSTOG00000021423) #27	L1CAM (ENSSTOG00000008316) #28	AVPR2 (ENSSTOG00000008352) #29	ARHGAP4 (ENSSTOG00000022503) #30	NAA10 (ENSSTOG00000010237) #31	RENBP (ENSSTOG00000010247) #32	HCFC1 (ENSSTOG00000029220) #33	IRAK1 (ENSSTOG00000007991) #34	MECP2 (ENSSTOG00000006094) #35	ENSSTOG00000024701 #36
Arctic ground squirrel	MODERN SPECIES	562					ZNF275 (ENSUPAG00010012750)	ENSUPAG00010012742	ZFP92 (ENSUPAG00010012725) #12	TREX2 (ENSUPAG00010012721) #13	HAUS7 (ENSUPAG00010012697) #14	BGN (ENSUPAG00010012684) #15	ATP2B3 (ENSUPAG00010012590) #16	CCNQ (ENSUPAG00010012574) #17	DUSP9 (ENSUPAG00010012557) #18	PNCK (ENSUPAG00010012527) #19	ENSUPAG00010012523 #20	ABCD1 (ENSUPAG00010012506) #22	ENSUPAG00010012496	ENSUPAG00010012465 #23	SRPK3 (ENSUPAG00010012441) #24	IDH3G (ENSUPAG00010012400) #25	SSR4 (ENSUPAG00010012375) #26	PDZD4 (ENSUPAG00010012358) #27	L1CAM (ENSUPAG00010012204) #28	AVPR2 (ENSUPAG00010012191) #29	ARHGAP4 (ENSUPAG00010012018) #30	NAA10 (ENSUPAG00010011976) #31	RENBP (ENSUPAG00010011941) #32	HCFC1 (ENSUPAG00010011877) #33	IRAK1 (ENSUPAG00010010971) #34	MECP2 (ENSUPAG00010010936) #35	ENSUPAG00010010918 #36
Alpin marmot	MODERN SPECIES	136					ENSMMMG00000007637	ENSMMMG00000007802	ENSMMMG00000007824	ENSMMMG00000007851	TREX2 (ENSMMMG00000007872) #13	HAUS7 (ENSMMMG00000007880) #14	BGN (ENSMMMG00000007908) #15	ATP2B3 (ENSMMMG00000007918) #16	CCNQ (ENSMMMG00000008029) #17	ENSMMMG00000008033 #20	BCAP31 (ENSMMMG00000008080) #21	ABCD1 (ENSMMMG00000008089) #22	PLXNB3 (ENSMMMG00000008113) #23	IDH3G (ENSMMMG00000008193) #25	SSR4 (ENSMMMG00000008221) #26	PDZD4 (ENSMMMG00000008247) #27	L1CAM (ENSMMMG00000008292) #28	AVPR2 (ENSMMMG00000008488) #29	ARHGAP4 (ENSMMMG00000008497) #30	ENSMMMG00000009143 #31	RENBP (ENSMMMG00000009149) #32	HCFC1 (ENSMMMG00000009171) #33	IRAK1 (ENSMMMG00000009239) #34	MECP2 (ENSMMMG00000009970) #35	ENSMMMG00000010010 #36	TEX28 (ENSMMMG00000010023)	TKTL1 (ENSMMMG00000010036) #37
Eurasian red squirrel	MODERN SPECIES	156	PNMA3 (ENSSVLG00005021940)	ENSSVLG00005021915	ENSSVLG00005021891	ENSSVLG00005021871	ENSSVLG00005021782	ENSSVLG00005021735	ZFP92 (ENSSVLG00005021718) #12	HAUS7 (ENSSVLG00005021619) #14	BGN (ENSSVLG00005021572) #15	ATP2B3 (ENSSVLG00005020846) #16	CCNQ (ENSSVLG00005020662) #17	DUSP9 (ENSSVLG00005020621) #18	PNCK (ENSSVLG00005020384) #19	ENSSVLG00005020284 #20	BCAP31 (ENSSVLG00005020208) #21	ABCD1 (ENSSVLG00005020163) #22	ENSSVLG00005020066 #23	SRPK3 (ENSSVLG00005020004) #24	IDH3G (ENSSVLG00005019902) #25	SSR4 (ENSSVLG00005019816) #26	PDZD4 (ENSSVLG00005019686) #27	AVPR2 (ENSSVLG00005019578) #29	ENSSVLG00005019536	ARHGAP4 (ENSSVLG00005019458) #30	NAA10 (ENSSVLG00005019123) #31	RENBP (ENSSVLG00005019023) #32	HCFC1 (ENSSVLG00005018524) #33	ENSSVLG00005018093 #34	MECP2 (ENSSVLG00005017899) #35	ENSSVLG00005017793 #36	ENSSVLG00005017738
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Kangaroo rat	MODERN SPECIES	526					ENSDORG00000029018	Zfp92 (ENSDORG00000001936) #12	Trex2 (ENSDORG00000023727) #13	Haus7 (ENSDORG00000001235) #14	ENSDORG00000001237 #15	Atp2b3 (ENSDORG00000013038) #16	ENSDORG00000012846 #17	Dusp9 (ENSDORG00000024222) #18	Pnck (ENSDORG00000014186) #19	Slc6a8 (ENSDORG00000001174) #20	Bcap31 (ENSDORG00000006022) #21	Abcd1 (ENSDORG00000006023) #22	Plxnb3 (ENSDORG00000006024) #23	Srpk3 (ENSDORG00000006026) #24	Idh3g (ENSDORG00000006029) #25	Ssr4 (ENSDORG00000006030) #26	Pdzd4 (ENSDORG00000028112) #27	L1cam (ENSDORG00000014093) #28	Avpr2 (ENSDORG00000002747) #29	Arhgap4 (ENSDORG00000002750) #30	Naa10 (ENSDORG00000002753) #31	Renbp (ENSDORG00000002755) #32	Hcfc1 (ENSDORG00000002756) #33	Irak1 (ENSDORG00000013876) #34	Mecp2 (ENSDORG00000014978) #35	Opn1mw (ENSDORG00000026454) #36	Tex28 (ENSDORG00000010136)
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Cricetinae	ANCESTRAL SPECIES	46		ENSGT00390000000062.x.b.k.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843	ENSGT00940000153588.b
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001023020	F8a (ENSCGRG00001010823)	ENSCGRG00001011071	Gm45015 (ENSCGRG00001000704)	ENSCGRG00001020684 #11	Gm18336 (ENSCGRG00001009753)	Zfp92 (ENSCGRG00001024615) #12	Trex2 (ENSCGRG00001012110) #13	Haus7 (ENSCGRG00001014259) #14	Bgn (ENSCGRG00001004273) #15	Atp2b3 (ENSCGRG00001013946) #16	Dusp9 (ENSCGRG00001015656) #18	Pnck (ENSCGRG00001015654) #19	Slc6a8 (ENSCGRG00001013941) #20	ENSCGRG00001022627 #21	Abcd1 (ENSCGRG00001017773) #22	Plxnb3 (ENSCGRG00001024658) #23	Srpk3 (ENSCGRG00001005920) #24	Idh3g (ENSCGRG00001012756) #25	Ssr4 (ENSCGRG00001019369) #26	Pdzd4 (ENSCGRG00001012732) #27	L1cam (ENSCGRG00001020541) #28	Avpr2 (ENSCGRG00001010799) #29	Arhgap4 (ENSCGRG00001023232) #30	Naa10 (ENSCGRG00001012595) #31	Hcfc1 (ENSCGRG00001019535) #33	Irak1 (ENSCGRG00001013928) #34	ENSCGRG00001022957	Mecp2 (ENSCGRG00001017650) #35	Opn1mw (ENSCGRG00001024157) #36	Tex28 (ENSCGRG00001014288)
Golden Hamster	MODERN SPECIES	857					ENSMAUG00000019268 #11	Gm18336 (ENSMAUG00000017654)	Zfp92 (ENSMAUG00000006204) #12	Trex2 (ENSMAUG00000006617) #13	Haus7 (ENSMAUG00000020073) #14	Bgn (ENSMAUG00000020050) #15	Atp2b3 (ENSMAUG00000009992) #16	Dusp9 (ENSMAUG00000020993) #18	Pnck (ENSMAUG00000017486) #19	Slc6a8 (ENSMAUG00000017007) #20	Bcap31 (ENSMAUG00000009135) #21	Abcd1 (ENSMAUG00000020103) #22	Plxnb3 (ENSMAUG00000005458) #23	Srpk3 (ENSMAUG00000009935) #24	Idh3g (ENSMAUG00000000657) #25	ENSMAUG00000015090 #26	Pdzd4 (ENSMAUG00000000466) #27	L1cam (ENSMAUG00000008575) #28	Avpr2 (ENSMAUG00000001098) #29	Arhgap4 (ENSMAUG00000020011) #30	Naa10 (ENSMAUG00000019021) #31	Hcfc1 (ENSMAUG00000018495) #33	Irak1 (ENSMAUG00000002430) #34	Mecp2 (ENSMAUG00000018195) #35	Opn1mw (ENSMAUG00000017549) #36	Tex28 (ENSMAUG00000011775)	Emd (ENSMAUG00000016655)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v.i #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Northern American deer mouse	MODERN SPECIES	475	Zfp185 (ENSPEMG00000001172)	Pnma5 (ENSPEMG00000029060)	ENSPEMG00000029415	ENSPEMG00000014112	Zfp275 (ENSPEMG00000028598)	ENSPEMG00000002119	Zfp92 (ENSPEMG00000029357) #12	Trex2 (ENSPEMG00000004918) #13	Haus7 (ENSPEMG00000011467) #14	Bgn (ENSPEMG00000017164) #15	Atp2b3 (ENSPEMG00000001607) #16	Dusp9 (ENSPEMG00000009249) #18	Pnck (ENSPEMG00000018929) #19	ENSPEMG00000001387 #20	Bcap31 (ENSPEMG00000018100) #21	Abcd1 (ENSPEMG00000010748) #22	Plxnb3 (ENSPEMG00000019022) #23	Srpk3 (ENSPEMG00000012149) #24	Idh3g (ENSPEMG00000011232) #25	Ssr4 (ENSPEMG00000008760) #26	Pdzd4 (ENSPEMG00000008494) #27	L1cam (ENSPEMG00000011592) #28	Avpr2 (ENSPEMG00000008325) #29	Arhgap4 (ENSPEMG00000019112) #30	ENSPEMG00000010870 #32	Hcfc1 (ENSPEMG00000011837) #33	Irak1 (ENSPEMG00000001469) #34	ENSPEMG00000025112	Mecp2 (ENSPEMG00000015115) #35	Opn1mw (ENSPEMG00000010994) #36	Tex28 (ENSPEMG00000009005)
Prairie vole	MODERN SPECIES	212					ENSMOCG00000008885	Gm18336 (ENSMOCG00000000683)	Zfp92 (ENSMOCG00000015417) #12	Trex2 (ENSMOCG00000001305) #13	ENSMOCG00000016829 #14	Bgn (ENSMOCG00000005439) #15	Atp2b3 (ENSMOCG00000016837) #16	Dusp9 (ENSMOCG00000014149) #18	Pnck (ENSMOCG00000005305) #19	Slc6a8 (ENSMOCG00000013922) #20	Bcap31 (ENSMOCG00000011355) #21	Abcd1 (ENSMOCG00000020381) #22	Plxnb3 (ENSMOCG00000016754) #23	Srpk3 (ENSMOCG00000000270) #24	Idh3g (ENSMOCG00000013265) #25	Ssr4 (ENSMOCG00000000481) #26	Pdzd4 (ENSMOCG00000013342) #27	L1cam (ENSMOCG00000018901) #28	Avpr2 (ENSMOCG00000012257) #29	Arhgap4 (ENSMOCG00000010795) #30	Naa10 (ENSMOCG00000011968) #31	Renbp (ENSMOCG00000021137) #32	Hcfc1 (ENSMOCG00000018390) #33
Murinae	ANCESTRAL SPECIES	14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Mus	ANCESTRAL SPECIES	9	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Mus_A	ANCESTRAL SPECIES	15	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Mus_B	ANCESTRAL SPECIES	14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Mouse	MODERN SPECIES	37	Xlr4c (ENSMUSG00000031362)	Xlr3c (ENSMUSG00000058147)	Xlr5c (ENSMUSG00000067764)	Gm45015 (ENSMUSG00000109368)	Zfp275 (ENSMUSG00000031365)	Gm18336 (ENSMUSG00000096966)	Zfp92 (ENSMUSG00000031374) #12	Trex2 (ENSMUSG00000031372) #13	Haus7 (ENSMUSG00000031371) #14	Bgn (ENSMUSG00000031375) #15	Atp2b3 (ENSMUSG00000031376) #16	Dusp9 (ENSMUSG00000031383) #18	Pnck (ENSMUSG00000002012) #19	Slc6a8 (ENSMUSG00000019558) #20	Bcap31 (ENSMUSG00000002015) #21	Abcd1 (ENSMUSG00000031378) #22	Plxnb3 (ENSMUSG00000031385) #23	Srpk3 (ENSMUSG00000002007) #24	Idh3g (ENSMUSG00000002010) #25	Ssr4 (ENSMUSG00000002014) #26	Pdzd4 (ENSMUSG00000002006) #27	L1cam (ENSMUSG00000031391) #28	Arhgap4 (ENSMUSG00000031389) #30	Avpr2 (ENSMUSG00000031390) #29	Naa10 (ENSMUSG00000031388) #31	Renbp (ENSMUSG00000031387) #32	Hcfc1 (ENSMUSG00000031386) #33	Irak1 (ENSMUSG00000031392) #34	Mecp2 (ENSMUSG00000031393) #35	Opn1mw (ENSMUSG00000031394) #36	Tex28 (ENSMUSG00000062564)
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
spretus	MODERN SPECIES	19	Nsdhl (MGP_SPRETEiJ_G0034297)	Zfp185 (MGP_SPRETEiJ_G0034298)	Pnma5 (MGP_SPRETEiJ_G0034299)	Pnma3 (MGP_SPRETEiJ_G0034300)	F8a (MGP_SPRETEiJ_G0034301)	Zfp275 (MGP_SPRETEiJ_G0034302)	Zfp92 (MGP_SPRETEiJ_G0034303) #12	Trex2 (MGP_SPRETEiJ_G0034304) #13	Haus7 (MGP_SPRETEiJ_G0034305) #14	Bgn (MGP_SPRETEiJ_G0034306) #15	Atp2b3 (MGP_SPRETEiJ_G0034307) #16	Dusp9 (MGP_SPRETEiJ_G0034308) #18	Pnck (MGP_SPRETEiJ_G0034309) #19	Slc6a8 (MGP_SPRETEiJ_G0034310) #20	Bcap31 (MGP_SPRETEiJ_G0034311) #21	Abcd1 (MGP_SPRETEiJ_G0034312) #22	Plxnb3 (MGP_SPRETEiJ_G0034313) #23	Srpk3 (MGP_SPRETEiJ_G0034314) #24	Idh3g (MGP_SPRETEiJ_G0034315) #25	Ssr4 (MGP_SPRETEiJ_G0034316) #26	Pdzd4 (MGP_SPRETEiJ_G0034317) #27	L1cam (MGP_SPRETEiJ_G0034318) #28	Arhgap4 (MGP_SPRETEiJ_G0034319) #30	Avpr2 (MGP_SPRETEiJ_G0034320) #29	Naa10 (MGP_SPRETEiJ_G0034321) #31	Renbp (MGP_SPRETEiJ_G0034322) #32	Hcfc1 (MGP_SPRETEiJ_G0034323) #33	Irak1 (MGP_SPRETEiJ_G0034324) #34	Mecp2 (MGP_SPRETEiJ_G0034325) #35	Opn1mw (MGP_SPRETEiJ_G0034326) #36	Tex28 (MGP_SPRETEiJ_G0034327)
Steppe mouse	MODERN SPECIES	1674																ENSMSIG00000015954 #22	Srpk3 (ENSMSIG00000015113) #24	Idh3g (ENSMSIG00000015022) #25
Ryukyu mouse	MODERN SPECIES	19	Gabrq (MGP_CAROLIEiJ_G0033142)	Cetn2 (MGP_CAROLIEiJ_G0033143)	Nsdhl (MGP_CAROLIEiJ_G0033144)	Zfp185 (MGP_CAROLIEiJ_G0033145)	Pnma5 (MGP_CAROLIEiJ_G0033146)	Zfp275 (MGP_CAROLIEiJ_G0033147)	Zfp92 (MGP_CAROLIEiJ_G0033148) #12	Trex2 (MGP_CAROLIEiJ_G0033149) #13	Haus7 (MGP_CAROLIEiJ_G0033150) #14	Bgn (MGP_CAROLIEiJ_G0033151) #15	Atp2b3 (MGP_CAROLIEiJ_G0033152) #16	Dusp9 (MGP_CAROLIEiJ_G0033153) #18	Pnck (MGP_CAROLIEiJ_G0033154) #19	Slc6a8 (MGP_CAROLIEiJ_G0033155) #20	Bcap31 (MGP_CAROLIEiJ_G0033156) #21	Abcd1 (MGP_CAROLIEiJ_G0033157) #22	Plxnb3 (MGP_CAROLIEiJ_G0033158) #23	Srpk3 (MGP_CAROLIEiJ_G0033159) #24	Idh3g (MGP_CAROLIEiJ_G0033160) #25	Ssr4 (MGP_CAROLIEiJ_G0033161) #26	Pdzd4 (MGP_CAROLIEiJ_G0033162) #27	L1cam (MGP_CAROLIEiJ_G0033163) #28	Arhgap4 (MGP_CAROLIEiJ_G0033164) #30	Avpr2 (MGP_CAROLIEiJ_G0033165) #29	Naa10 (MGP_CAROLIEiJ_G0033166) #31	Renbp (MGP_CAROLIEiJ_G0033167) #32	Hcfc1 (MGP_CAROLIEiJ_G0033168) #33	Irak1 (MGP_CAROLIEiJ_G0033169) #34	Mecp2 (MGP_CAROLIEiJ_G0033170) #35	Opn1mw (MGP_CAROLIEiJ_G0033171) #36	Tex28 (MGP_CAROLIEiJ_G0033172)
Shrew mouse	MODERN SPECIES	23	Nsdhl (MGP_PahariEiJ_G0031685)	Zfp185 (MGP_PahariEiJ_G0031686)	MGP_PahariEiJ_G0031687	MGP_PahariEiJ_G0031688	MGP_PahariEiJ_G0031689	Zfp275 (MGP_PahariEiJ_G0031690)	MGP_PahariEiJ_G0031691 #12	Trex2 (MGP_PahariEiJ_G0031692) #13	Haus7 (MGP_PahariEiJ_G0031693) #14	Bgn (MGP_PahariEiJ_G0031694) #15	Atp2b3 (MGP_PahariEiJ_G0031695) #16	Dusp9 (MGP_PahariEiJ_G0031696) #18	Pnck (MGP_PahariEiJ_G0031697) #19	Slc6a8 (MGP_PahariEiJ_G0031698) #20	Bcap31 (MGP_PahariEiJ_G0031699) #21	Abcd1 (MGP_PahariEiJ_G0031700) #22	Plxnb3 (MGP_PahariEiJ_G0031701) #23	Srpk3 (MGP_PahariEiJ_G0031702) #24	Idh3g (MGP_PahariEiJ_G0031703) #25	Ssr4 (MGP_PahariEiJ_G0031704) #26	Pdzd4 (MGP_PahariEiJ_G0031705) #27	L1cam (MGP_PahariEiJ_G0031706) #28	Arhgap4 (MGP_PahariEiJ_G0031707) #30	Avpr2 (MGP_PahariEiJ_G0031708) #29	Naa10 (MGP_PahariEiJ_G0031709) #31	Renbp (MGP_PahariEiJ_G0031710) #32	Hcfc1 (MGP_PahariEiJ_G0031711) #33	Irak1 (MGP_PahariEiJ_G0031712) #34	Mecp2 (MGP_PahariEiJ_G0031713) #35	Opn1mw (MGP_PahariEiJ_G0031714) #36	Tex28 (MGP_PahariEiJ_G0031715)
Rat	MODERN SPECIES	46	LOC100911002 (ENSRNOG00000050177)	Pwwp4 (ENSRNOG00000068777)	ENSRNOG00000069789	Zfp275 (ENSRNOG00000061073)	RGD1559982 (ENSRNOG00000070467)	Zfp92 (ENSRNOG00000051836) #12	Trex2 (ENSRNOG00000056983) #13	Haus7 (ENSRNOG00000055648) #14	Bgn (ENSRNOG00000055962) #15	Atp2b3 (ENSRNOG00000061304) #16	AABR07071935.1 (ENSRNOG00000061441)	Dusp9 (ENSRNOG00000055185) #18	Pnck (ENSRNOG00000058317) #19	Slc6a8 (ENSRNOG00000057620) #20	Bcap31 (ENSRNOG00000055756) #21	Abcd1 (ENSRNOG00000056524) #22	Plxnb3 (ENSRNOG00000061731) #23	Srpk3 (ENSRNOG00000054548) #24	Idh3g (ENSRNOG00000055572) #25	Ssr4 (ENSRNOG00000053172) #26	Pdzd4 (ENSRNOG00000056174) #27	L1cam (ENSRNOG00000061230) #28	Arhgap4 (ENSRNOG00000058545) #30	Avpr2 (ENSRNOG00000059862) #29	Naa10 (ENSRNOG00000060063) #31	Renbp (ENSRNOG00000054765) #32	Hcfc1 (ENSRNOG00000051948) #33	Irak1 (ENSRNOG00000060869) #34	Mecp2 (ENSRNOG00000056659) #35	Opn1mw (ENSRNOG00000051529) #36	Tex28 (ENSRNOG00000051438)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Nsdhl (ENSNGAG00000013199)	Zfp185 (ENSNGAG00000007010)	Pnma3 (ENSNGAG00000021577)	Zfp275 (ENSNGAG00000023803)	Gm18336 (ENSNGAG00000010715)	Zfp92 (ENSNGAG00000014044) #12	Trex2 (ENSNGAG00000022556) #13	Haus7 (ENSNGAG00000004509) #14	Bgn (ENSNGAG00000020236) #15	Atp2b3 (ENSNGAG00000023103) #16	ENSNGAG00000022572 #17	Dusp9 (ENSNGAG00000022463) #18	Pnck (ENSNGAG00000024203) #19	Slc6a8 (ENSNGAG00000012992) #20	Bcap31 (ENSNGAG00000005195) #21	Abcd1 (ENSNGAG00000023420) #22	Plxnb3 (ENSNGAG00000023368) #23	Srpk3 (ENSNGAG00000021121) #24	Idh3g (ENSNGAG00000017889) #25	ENSNGAG00000015787 #26	Pdzd4 (ENSNGAG00000009443) #27	L1cam (ENSNGAG00000013550) #28	Avpr2 (ENSNGAG00000009849) #29	Arhgap4 (ENSNGAG00000015413) #30	Naa10 (ENSNGAG00000020303) #31	Renbp (ENSNGAG00000021686) #32	Hcfc1 (ENSNGAG00000013083) #33	Irak1 (ENSNGAG00000011647) #34	Mecp2 (ENSNGAG00000009171) #35	Opn1mw (ENSNGAG00000011604) #36	Tex28 (ENSNGAG00000023701)
Lesser Egyptian jerboa	MODERN SPECIES	224			Pnma5 (ENSJJAG00000022106)	ENSJJAG00000023268	Zfp275 (ENSJJAG00000023544)	ENSJJAG00000023776	Zfp92 (ENSJJAG00000024019) #12	Trex2 (ENSJJAG00000012484) #13	Haus7 (ENSJJAG00000011304) #14	Bgn (ENSJJAG00000014050) #15	Atp2b3 (ENSJJAG00000014975) #16	Dusp9 (ENSJJAG00000018570) #18	Pnck (ENSJJAG00000020546) #19	Slc6a8 (ENSJJAG00000022046) #20	Bcap31 (ENSJJAG00000011510) #21	Abcd1 (ENSJJAG00000012430) #22	Plxnb3 (ENSJJAG00000017006) #23	Srpk3 (ENSJJAG00000019785) #24	Idh3g (ENSJJAG00000015962) #25	Ssr4 (ENSJJAG00000017842) #26	Pdzd4 (ENSJJAG00000018534) #27	L1cam (ENSJJAG00000021077) #28	Avpr2 (ENSJJAG00000018314) #29	Arhgap4 (ENSJJAG00000021798) #30	Naa10 (ENSJJAG00000023398) #31	Renbp (ENSJJAG00000010739) #32	Hcfc1 (ENSJJAG00000012815) #33	Irak1 (ENSJJAG00000013849) #34	Mecp2 (ENSJJAG00000022463) #35	ENSJJAG00000022596	Opn1mw (ENSJJAG00000022699) #36
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000182955.a.b.a #22
Rabbit	MODERN SPECIES	549							TREX2 (ENSOCUG00000025054) #13	ENSOCUG00000002376 #14	BGN (ENSOCUG00000023931) #15	ATP2B3 (ENSOCUG00000029623) #16	CCNQ (ENSOCUG00000002393) #17	DUSP9 (ENSOCUG00000021158) #18	PNCK (ENSOCUG00000002399) #19	BCAP31 (ENSOCUG00000017921) #21	PLXNB3 (ENSOCUG00000016506) #23	ABCD1 (ENSOCUG00000017922) #22	IDH3G (ENSOCUG00000016554) #25	SSR4 (ENSOCUG00000027360) #26	ENSOCUG00000026260 #20	PDZD4 (ENSOCUG00000017200) #27	L1CAM (ENSOCUG00000001102) #28	AVPR2 (ENSOCUG00000015695) #29	ARHGAP4 (ENSOCUG00000001107) #30	NAA10 (ENSOCUG00000001111) #31	RENBP (ENSOCUG00000025840) #32	HCFC1 (ENSOCUG00000001113) #33	TMEM187 (ENSOCUG00000001116)	IRAK1 (ENSOCUG00000025860) #34	MECP2 (ENSOCUG00000013147) #35	OPN1MW (ENSOCUG00000011466) #36	TEX28 (ENSOCUG00000021000)
Pika	MODERN SPECIES	5351																ABCD1 (ENSOPRG00000002904) #22
Tree shrew	MODERN SPECIES	4618															BCAP31 (ENSTBEG00000012565) #21	ABCD1 (ENSTBEG00000012640) #22
Primates	ANCESTRAL SPECIES	23	ENSGT00390000001700.a.b.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Simiiformes	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e.a.b #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #28	ENSGT00940000167437	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34
Hominidae	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00940000162921	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e.a.b #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #28	ENSGT00940000167437	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e.a.b #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #28	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e.a.b #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #28	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34
Pan	ANCESTRAL SPECIES	6	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e.a.b #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #28	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34
Bonobo	MODERN SPECIES	369	ZNF185 (ENSPPAG00000039048)	PNMA5 (ENSPPAG00000009176)	PNMA3 (ENSPPAG00000033493)	ENSPPAG00000043033	ENSPPAG00000016764	ZFP92 (ENSPPAG00000027875) #12	HAUS7 (ENSPPAG00000034336) #14	BGN (ENSPPAG00000033259) #15	ATP2B3 (ENSPPAG00000028306) #16	ENSPPAG00000027886 #17	DUSP9 (ENSPPAG00000043656) #18	ENSPPAG00000029417	PNCK (ENSPPAG00000030824) #19	SLC6A8 (ENSPPAG00000035106) #20	BCAP31 (ENSPPAG00000033741) #21	ABCD1 (ENSPPAG00000038979) #22	PLXNB3 (ENSPPAG00000029812) #23	SRPK3 (ENSPPAG00000030197) #24	IDH3G (ENSPPAG00000041999) #25	SSR4 (ENSPPAG00000041018) #26	PDZD4 (ENSPPAG00000038351) #27	ENSPPAG00000001011	L1CAM (ENSPPAG00000042079) #28	AVPR2 (ENSPPAG00000034862) #29	ARHGAP4 (ENSPPAG00000039545) #30	ENSPPAG00000037021 #31	RENBP (ENSPPAG00000035978) #32	HCFC1 (ENSPPAG00000044057) #33	TMEM187 (ENSPPAG00000007444)	IRAK1 (ENSPPAG00000040186) #34	ENSPPAG00000042175
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000048952	ENSPTRG00000044850	MAGEA1 (ENSPTRG00000022386)	PNMA6F (ENSPTRG00000049868)	ZNF275 (ENSPTRG00000022394)	ZFP92 (ENSPTRG00000047228) #12	HAUS7 (ENSPTRG00000022397) #14	BGN (ENSPTRG00000022541) #15	ATP2B3 (ENSPTRG00000022399) #16	CCNQ (ENSPTRG00000043565) #17	ENSPTRG00000050474 #18	ENSPTRG00000043668	PNCK (ENSPTRG00000022404) #19	ENSPTRG00000050829 #20	BCAP31 (ENSPTRG00000046838) #21	ABCD1 (ENSPTRG00000051738) #22	PLXNB3 (ENSPTRG00000052414) #23	SRPK3 (ENSPTRG00000022410) #24	IDH3G (ENSPTRG00000024398) #25	SSR4 (ENSPTRG00000022412) #26	PDZD4 (ENSPTRG00000022413) #27	ENSPTRG00000045057	L1CAM (ENSPTRG00000022416) #28	ENSPTRG00000039921	AVPR2 (ENSPTRG00000033849) #29	ARHGAP4 (ENSPTRG00000033931) #30	NAA10 (ENSPTRG00000022419) #31	RENBP (ENSPTRG00000022420) #32	HCFC1 (ENSPTRG00000022421) #33	ENSPTRG00000022422	IRAK1 (ENSPTRG00000022423) #34
Human	MODERN SPECIES	1827	MAGEA1 (ENSG00000198681)	PWWP4 (ENSG00000278803)	PNMA6F (ENSG00000225110)	ZNF275 (ENSG00000063587)	PNMA6E (ENSG00000214897)	ZFP92 (ENSG00000189420) #12	TREX2 (ENSG00000183479) #13	HAUS7 (ENSG00000213397) #14	BGN (ENSG00000182492) #15	ATP2B3 (ENSG00000067842) #16	CCNQ (ENSG00000262919) #17	DUSP9 (ENSG00000130829) #18	PNCK (ENSG00000130822) #19	SLC6A8 (ENSG00000130821) #20	BCAP31 (ENSG00000185825) #21	ABCD1 (ENSG00000101986) #22	PLXNB3 (ENSG00000198753) #23	SRPK3 (ENSG00000184343) #24	IDH3G (ENSG00000067829) #25	SSR4 (ENSG00000180879) #26	PDZD4 (ENSG00000067840) #27	L1CAM (ENSG00000198910) #28	AVPR2 (ENSG00000126895) #29	ARHGAP4 (ENSG00000089820) #30	NAA10 (ENSG00000102030) #31	RENBP (ENSG00000102032) #32	HCFC1 (ENSG00000172534) #33	TMEM187 (ENSG00000177854)	IRAK1 (ENSG00000184216) #34	MECP2 (ENSG00000169057) #35	OPN1LW (ENSG00000102076) #36
Gorilla	MODERN SPECIES	523	MAGEA1 (ENSGGOG00000010904)	PNMA6F (ENSGGOG00000039046)	ENSGGOG00000010898	ENSGGOG00000038628	ZFP92 (ENSGGOG00000039989) #12	TREX2 (ENSGGOG00000036312) #13	HAUS7 (ENSGGOG00000007959) #14	BGN (ENSGGOG00000007211) #15	ATP2B3 (ENSGGOG00000007217) #16	ENSGGOG00000027073 #17	DUSP9 (ENSGGOG00000015273) #18	ENSGGOG00000039596	PNCK (ENSGGOG00000005546) #19	ENSGGOG00000041742 ##20	ENSGGOG00000005559 #21	ABCD1 (ENSGGOG00000005561) #22	PLXNB3 (ENSGGOG00000027723) #23	SRPK3 (ENSGGOG00000036424) #24	IDH3G (ENSGGOG00000023796) #25	SSR4 (ENSGGOG00000024329) #26	PDZD4 (ENSGGOG00000007937) #27	AVPR2 (ENSGGOG00000027387) #29	ARHGAP4 (ENSGGOG00000009770) #30	NAA10 (ENSGGOG00000009788) #31	RENBP (ENSGGOG00000009791) #32	HCFC1 (ENSGGOG00000009800) #33	TMEM187 (ENSGGOG00000008146)	IRAK1 (ENSGGOG00000000220) #34	ENSGGOG00000040298	ENSGGOG00000041822	MECP2 (ENSGGOG00000042467) #35
Orangutan	MODERN SPECIES	242	PNMA6A (ENSPPYG00000020836)	MAGEA1 (ENSPPYG00000020837)	PNMA6F (ENSPPYG00000020840)	ZNF275 (ENSPPYG00000020839)	ENSPPYG00000033472	ENSPPYG00000020841 #12	HAUS7 (ENSPPYG00000020843) #14	BGN (ENSPPYG00000020844) #15	ATP2B3 (ENSPPYG00000020845) #16	CCNQ (ENSPPYG00000020846) #17	DUSP9 (ENSPPYG00000020847) #18	ENSPPYG00000031169	ENSPPYG00000020848 #19	SLC6A8 (ENSPPYG00000037616) #20	BCAP31 (ENSPPYG00000020850) #21	ABCD1 (ENSPPYG00000020852) #22	SRPK3 (ENSPPYG00000020854) #24	IDH3G (ENSPPYG00000020855) #25	SSR4 (ENSPPYG00000020856) #26	PDZD4 (ENSPPYG00000020857) #27	ENSPPYG00000031511	L1CAM (ENSPPYG00000020858) #28	ENSPPYG00000020859 #29	ARHGAP4 (ENSPPYG00000020860) #30	NAA10 (ENSPPYG00000020861) #31	RENBP (ENSPPYG00000020862) #32	HCFC1 (ENSPPYG00000020863) #33	TMEM187 (ENSPPYG00000020864)	IRAK1 (ENSPPYG00000020865) #34	MECP2 (ENSPPYG00000020866) #35	ENSPPYG00000020867 #36
Gibbon	MODERN SPECIES	449	ZNF185 (ENSNLEG00000013907)	PNMA3 (ENSNLEG00000018300)	ENSNLEG00000014065	ENSNLEG00000031614	ENSNLEG00000027745	ZFP92 (ENSNLEG00000013228) #12	ENSNLEG00000013237 #13	ENSNLEG00000031253 #14	BGN (ENSNLEG00000013250) #15	ATP2B3 (ENSNLEG00000032741) #16	CCNQ (ENSNLEG00000013298) #17	DUSP9 (ENSNLEG00000013321) #18	ENSNLEG00000027939	PNCK (ENSNLEG00000013336) #19	BCAP31 (ENSNLEG00000013380) #21	ABCD1 (ENSNLEG00000013458) #22	PLXNB3 (ENSNLEG00000013475) #23	ENSNLEG00000013518 #24	IDH3G (ENSNLEG00000013540) #25	SSR4 (ENSNLEG00000013602) #26	PDZD4 (ENSNLEG00000013626) #27	ENSNLEG00000034251	L1CAM (ENSNLEG00000013647) #28	ENSNLEG00000031864	AVPR2 (ENSNLEG00000013671) #29	ARHGAP4 (ENSNLEG00000013678) #30	NAA10 (ENSNLEG00000013724) #31	ENSNLEG00000013753 #32	HCFC1 (ENSNLEG00000026624) #33	TMEM187 (ENSNLEG00000013763)	ENSNLEG00000013767 #34
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Rhinopithecus	ANCESTRAL SPECIES	195			ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35
Black snub-nosed monkey	MODERN SPECIES	661			PNMA6F (ENSRBIG00000030196)	ENSRBIG00000041318 #11	PNMA6E (ENSRBIG00000025010)	ZFP92 (ENSRBIG00000027712) #12	HAUS7 (ENSRBIG00000038209) #14	BGN (ENSRBIG00000043894) #15	ATP2B3 (ENSRBIG00000030237) #16	CCNQ (ENSRBIG00000034283) #17	DUSP9 (ENSRBIG00000031725) #18	ENSRBIG00000028856	PNCK (ENSRBIG00000039714) #19	SLC6A8 (ENSRBIG00000040899) #20	BCAP31 (ENSRBIG00000043421) #21	ABCD1 (ENSRBIG00000044662) #22	PLXNB3 (ENSRBIG00000026773) #23	IDH3G (ENSRBIG00000035445) #25	SSR4 (ENSRBIG00000015579) #26	PDZD4 (ENSRBIG00000029436) #27	L1CAM (ENSRBIG00000036638) #28	ENSRBIG00000032383 #29	ENSRBIG00000034619 #29	ARHGAP4 (ENSRBIG00000031629) #30	NAA10 (ENSRBIG00000040703) #31	RENBP (ENSRBIG00000020101) #32	HCFC1 (ENSRBIG00000038921) #33	IRAK1 (ENSRBIG00000037074) #34	ENSRBIG00000019564	ENSRBIG00000044898	ENSRBIG00000036061
Golden snub-nosed monkey	MODERN SPECIES	977				ENSRROG00000033043	ENSRROG00000028871	ZFP92 (ENSRROG00000031212) #12	HAUS7 (ENSRROG00000005507) #14	BGN (ENSRROG00000042294) #15	ATP2B3 (ENSRROG00000043666) #16	CCNQ (ENSRROG00000038429) #17	DUSP9 (ENSRROG00000037162) #18	ENSRROG00000039351	PNCK (ENSRROG00000044383) #19	SLC6A8 (ENSRROG00000045113) #20	BCAP31 (ENSRROG00000045725) #21	ABCD1 (ENSRROG00000037289) #22	PLXNB3 (ENSRROG00000039660) #23	SRPK3 (ENSRROG00000011319) #24	IDH3G (ENSRROG00000044366) #25	SSR4 (ENSRROG00000035638) #26	PDZD4 (ENSRROG00000042678) #27	L1CAM (ENSRROG00000041494) #28	AVPR2 (ENSRROG00000036522) #29	ARHGAP4 (ENSRROG00000045508) #30	NAA10 (ENSRROG00000041881) #31	RENBP (ENSRROG00000034139) #32	HCFC1 (ENSRROG00000004412) #33
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Pig-tailed macaque	MODERN SPECIES	390			PNMA6F (ENSMNEG00000031969)	ENSMNEG00000039113	PNMA6E (ENSMNEG00000038171)	ZFP92 (ENSMNEG00000042434) #12	HAUS7 (ENSMNEG00000036428) #14	BGN (ENSMNEG00000042759) #15	ATP2B3 (ENSMNEG00000044784) #16	CCNQ (ENSMNEG00000042079) #17	DUSP9 (ENSMNEG00000040094) #18	ENSMNEG00000028994	PNCK (ENSMNEG00000040586) #19	SLC6A8 (ENSMNEG00000005457) #20	BCAP31 (ENSMNEG00000028474) #21	ABCD1 (ENSMNEG00000033571) #22	PLXNB3 (ENSMNEG00000032414) #23	SRPK3 (ENSMNEG00000030566) #24	IDH3G (ENSMNEG00000042620) #25	SSR4 (ENSMNEG00000042721) #26	PDZD4 (ENSMNEG00000041450) #27	L1CAM (ENSMNEG00000042796) #28	AVPR2 (ENSMNEG00000029040) #29	ARHGAP4 (ENSMNEG00000039860) #30	NAA10 (ENSMNEG00000034261) #31	RENBP (ENSMNEG00000038526) #32	HCFC1 (ENSMNEG00000033780) #33	IRAK1 (ENSMNEG00000021597) #34	ENSMNEG00000003405	ENSMNEG00000037974	MECP2 (ENSMNEG00000017455) #35
Macaca_a	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162843
Rhesus	MODERN SPECIES	327	PNMA3 (ENSMMUG00000010897)	ENSMMUG00000063804	ENSMMUG00000053273	PNMA6F (ENSMMUG00000048764)	ENSMMUG00000013386	PNMA6E (ENSMMUG00000045255)	ZFP92 (ENSMMUG00000057937) #12	HAUS7 (ENSMMUG00000012739) #14	BGN (ENSMMUG00000012743) #15	ATP2B3 (ENSMMUG00000011478) #16	CCNQ (ENSMMUG00000011480) #17	DUSP9 (ENSMMUG00000056988) #18	PNCK (ENSMMUG00000010585) #19	SLC6A8 (ENSMMUG00000012742) #20	BCAP31 (ENSMMUG00000012744) #21	ABCD1 (ENSMMUG00000012746) #22	SRPK3 (ENSMMUG00000003372) #24	IDH3G (ENSMMUG00000003374) #25	SSR4 (ENSMMUG00000003375) #26	PDZD4 (ENSMMUG00000003377) #27	L1CAM (ENSMMUG00000003379) #28	AVPR2 (ENSMMUG00000064945) #29	ARHGAP4 (ENSMMUG00000000323) #30	NAA10 (ENSMMUG00000000322) #31	RENBP (ENSMMUG00000000320) #32	HCFC1 (ENSMMUG00000000319) #33	TMEM187 (ENSMMUG00000005132)	IRAK1 (ENSMMUG00000018703) #34	MECP2 (ENSMMUG00000018704) #35	ENSMMUG00000006166 #36	ENSMMUG00000055487
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052
Olive baboon	MODERN SPECIES	792	PNMA3 (ENSPANG00000008016)	ENSPANG00000040158	PNMA6F (ENSPANG00000035246)	ENSPANG00000015246 #11	ENSPANG00000035942	ZFP92 (ENSPANG00000006612) #12	TREX2 (ENSPANG00000039672) #13	HAUS7 (ENSPANG00000014066) #14	BGN (ENSPANG00000022851) #15	ATP2B3 (ENSPANG00000014878) #16	BCAP31 (ENSPANG00000001625) #21	SLC6A8 (ENSPANG00000010089) #20	PNCK (ENSPANG00000013747) #19	DUSP9 (ENSPANG00000004029) #18	CCNQ (ENSPANG00000026424) #17	ABCD1 (ENSPANG00000025399) #22	PLXNB3 (ENSPANG00000008014) #23	SRPK3 (ENSPANG00000004220) #24	IDH3G (ENSPANG00000023323) #25	SSR4 (ENSPANG00000006591) #26	PDZD4 (ENSPANG00000000291) #27	L1CAM (ENSPANG00000013145) #28	AVPR2 (ENSPANG00000004382) #29	ARHGAP4 (ENSPANG00000010087) #30	NAA10 (ENSPANG00000014390) #31	RENBP (ENSPANG00000008961) #32	HCFC1 (ENSPANG00000024276) #33	TMEM187 (ENSPANG00000050796)	IRAK1 (ENSPANG00000015781) #34	MECP2 (ENSPANG00000011691) #35	OPN1LW (ENSPANG00000011135) #36
Cercopithecinae_d	ANCESTRAL SPECIES	141			ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.e #17	ENSGT00940000161880 #18	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35
Sooty mangabey	MODERN SPECIES	286									ENSCATG00000032628	CCNQ (ENSCATG00000013187) #17	DUSP9 (ENSCATG00000009164) #18	ENSCATG00000003729	PNCK (ENSCATG00000041955) #19	SLC6A8 (ENSCATG00000001771) #20	BCAP31 (ENSCATG00000043253) #21	ABCD1 (ENSCATG00000042536) #22	PLXNB3 (ENSCATG00000037895) #23	SRPK3 (ENSCATG00000045096) #24	IDH3G (ENSCATG00000042112) #25	SSR4 (ENSCATG00000006344) #26	PDZD4 (ENSCATG00000043997) #27	L1CAM (ENSCATG00000041515) #28	AVPR2 (ENSCATG00000036647) #29	ARHGAP4 (ENSCATG00000042499) #30	NAA10 (ENSCATG00000038709) #31	RENBP (ENSCATG00000037009) #32	HCFC1 (ENSCATG00000022004) #33	IRAK1 (ENSCATG00000044264) #34	ENSCATG00000020302	ENSCATG00000018741	MECP2 (ENSCATG00000017038) #35
Drill	MODERN SPECIES	1411			PNMA6F (ENSMLEG00000035105)	ENSMLEG00000040255	PNMA6E (ENSMLEG00000041204)	ZFP92 (ENSMLEG00000013319) #12	HAUS7 (ENSMLEG00000038483) #14	BGN (ENSMLEG00000029067) #15	ATP2B3 (ENSMLEG00000032665) #16	CCNQ (ENSMLEG00000039950) #17	DUSP9 (ENSMLEG00000042559) #18	ENSMLEG00000027362	PNCK (ENSMLEG00000027716) #19	SLC6A8 (ENSMLEG00000042530) #20	BCAP31 (ENSMLEG00000042884) #21	ABCD1 (ENSMLEG00000041428) #22	PLXNB3 (ENSMLEG00000032454) #23	IDH3G (ENSMLEG00000038908) #25	SSR4 (ENSMLEG00000016802) #26	PDZD4 (ENSMLEG00000004595) #27	L1CAM (ENSMLEG00000036326) #28	AVPR2 (ENSMLEG00000042889) #29	ARHGAP4 (ENSMLEG00000038659) #30	NAA10 (ENSMLEG00000032424) #31	RENBP (ENSMLEG00000038487) #32	HCFC1 (ENSMLEG00000042451) #33	IRAK1 (ENSMLEG00000029062) #34	ENSMLEG00000009357	ENSMLEG00000027410	MECP2 (ENSMLEG00000032763) #35	ENSMLEG00000033448 #36
Vervet Monkey	MODERN SPECIES	11	ENSCSAG00000018755	ENSCSAG00000018756	JAG1 (ENSCSAG00000013670)	SLX4IP (ENSCSAG00000013658)	MKKS (ENSCSAG00000013641)	SNAP25 (ENSCSAG00000013635)	ANKEF1 (ENSCSAG00000013628)	PAK5 (ENSCSAG00000013621)	LAMP5 (ENSCSAG00000013614)	PLCB4 (ENSCSAG00000013606)	PLCB1 (ENSCSAG00000013586)	ENSCSAG00000013566	TMX4 (ENSCSAG00000013556)	HAO1 (ENSCSAG00000013525)	BMP2 (ENSCSAG00000013514)	ENSCSAG00000013506 #22	FERMT1 (ENSCSAG00000013498)	LRRN4 (ENSCSAG00000013488)	CRLS1 (ENSCSAG00000013478)	MCM8 (ENSCSAG00000013471)	TRMT6 (ENSCSAG00000013461)	CHGB (ENSCSAG00000013449)	SHLD1 (ENSCSAG00000013442)	GPCPD1 (ENSCSAG00000013433)	PROKR2 (ENSCSAG00000013412)	CDS2 (ENSCSAG00000013406)	PCNA (ENSCSAG00000013400)	TMEM230 (ENSCSAG00000013392)	SLC23A2 (ENSCSAG00000013382)	RASSF2 (ENSCSAG00000013371)	PRND (ENSCSAG00000018757)
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.c #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a.f #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35
Cebidae	ANCESTRAL SPECIES	27	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.c #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a.f #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35
Cebidae_a	ANCESTRAL SPECIES	78			ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445.c #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a.f #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35
Capuchin	MODERN SPECIES	597			ENSCCAG00000024093	ENSCCAG00000020739	ENSCCAG00000030112	ZFP92 (ENSCCAG00000034129) #12	HAUS7 (ENSCCAG00000030265) #14	BGN (ENSCCAG00000018493) #15	ATP2B3 (ENSCCAG00000027100) #16	CCNQ (ENSCCAG00000029897) #17	DUSP9 (ENSCCAG00000033198) #18	ENSCCAG00000023569	PNCK (ENSCCAG00000021403) #19	SLC6A8 (ENSCCAG00000035546) #20	BCAP31 (ENSCCAG00000033187) #21	ABCD1 (ENSCCAG00000019717) #22	PLXNB3 (ENSCCAG00000024352) #23	SRPK3 (ENSCCAG00000021599) #24	SSR4 (ENSCCAG00000020454) #26	PDZD4 (ENSCCAG00000022158) #27	L1CAM (ENSCCAG00000032233) #28	AVPR2 (ENSCCAG00000028592) #29	ARHGAP4 (ENSCCAG00000025262) #30	ENSCCAG00000033959 #31	RENBP (ENSCCAG00000037940) #32	HCFC1 (ENSCCAG00000021425) #33	IRAK1 (ENSCCAG00000023583) #34	ENSCCAG00000020001	ENSCCAG00000028727	MECP2 (ENSCCAG00000037407) #35	ENSCCAG00000036350 #36
Bolivian squirrel monkey	MODERN SPECIES	236				PNMA6F (ENSSBOG00000015383)	ENSSBOG00000027546	ENSSBOG00000030661	ZFP92 (ENSSBOG00000028775) #12	HAUS7 (ENSSBOG00000028472) #14	BGN (ENSSBOG00000029980) #15	ATP2B3 (ENSSBOG00000032052) #16	ENSSBOG00000029871 #17	DUSP9 (ENSSBOG00000001225) #18	PNCK (ENSSBOG00000031039) #19	ENSSBOG00000033535 #20	ENSSBOG00000028295 #21	ABCD1 (ENSSBOG00000024968) #22	PLXNB3 (ENSSBOG00000025081) #23	SRPK3 (ENSSBOG00000024085) #24	IDH3G (ENSSBOG00000019899) #25	SSR4 (ENSSBOG00000022316) #26	PDZD4 (ENSSBOG00000033217) #27	L1CAM (ENSSBOG00000033301) #28	AVPR2 (ENSSBOG00000031595) #29	ARHGAP4 (ENSSBOG00000023946) #30	ENSSBOG00000020071 #31	RENBP (ENSSBOG00000034728) #32	HCFC1 (ENSSBOG00000034222) #33	IRAK1 (ENSSBOG00000018599) #34	ENSSBOG00000017747	MECP2 (ENSSBOG00000024999) #35	ENSSBOG00000025722
Marmoset	MODERN SPECIES	78	PNMA3 (ENSCJAG00000022542)	PWWP4 (ENSCJAG00000052872)	PNMA6F (ENSCJAG00000042286)	ENSCJAG00000019468	PNMA6E (ENSCJAG00000048415)	ZFP92 (ENSCJAG00000011538) #12	TREX2 (ENSCJAG00000011515) #13	HAUS7 (ENSCJAG00000036194) #14	BGN (ENSCJAG00000011493) #15	ATP2B3 (ENSCJAG00000011413) #16	ENSCJAG00000011407 #17	DUSP9 (ENSCJAG00000047408) #18	ENSCJAG00000081213 #19	ENSCJAG00000011356 #20	BCAP31 (ENSCJAG00000011348) #21	ABCD1 (ENSCJAG00000011337) #22	PLXNB3 (ENSCJAG00000011267) #23	SRPK3 (ENSCJAG00000011233) #24	PDZD4 (ENSCJAG00000011185) #27	SSR4 (ENSCJAG00000011167) #26	ENSCJAG00000074256	ENSCJAG00000022809	L1CAM (ENSCJAG00000011023) #28	ARHGAP4 (ENSCJAG00000011008) #30	AVPR2 (ENSCJAG00000011022) #29	NAA10 (ENSCJAG00000014506) #31	RENBP (ENSCJAG00000014500) #32	IRAK1 (ENSCJAG00000014452) #34	MECP2 (ENSCJAG00000016796) #35	ENSCJAG00000014412 #36	TEX28 (ENSCJAG00000042631)
Mas night monkey	MODERN SPECIES	1312				PNMA6F (ENSANAG00000025537)	ZNF275 (ENSANAG00000025581)	ENSANAG00000022983	ZFP92 (ENSANAG00000038344) #12	HAUS7 (ENSANAG00000022685) #14	BGN (ENSANAG00000033529) #15	ATP2B3 (ENSANAG00000032972) #16	ENSANAG00000000457 #17	DUSP9 (ENSANAG00000019919) #18	PNCK (ENSANAG00000010774) #19	ENSANAG00000037607 #20	BCAP31 (ENSANAG00000035222) #21	ABCD1 (ENSANAG00000035583) #22	PLXNB3 (ENSANAG00000036384) #23	SRPK3 (ENSANAG00000037077) #24	ENSANAG00000024077 #25	SSR4 (ENSANAG00000035059) #26	PDZD4 (ENSANAG00000026191) #27	L1CAM (ENSANAG00000035752) #28	AVPR2 (ENSANAG00000022496) #29	ARHGAP4 (ENSANAG00000023680) #30	NAA10 (ENSANAG00000019745) #31	RENBP (ENSANAG00000034421) #32	HCFC1 (ENSANAG00000030898) #33	IRAK1 (ENSANAG00000030752) #34	ENSANAG00000019708	MECP2 (ENSANAG00000019603) #35	ENSANAG00000034691 #36
Tarsier	MODERN SPECIES	2197					ENSTSYG00000000195	ENSTSYG00000036390	ENSTSYG00000031978 #12	HAUS7 (ENSTSYG00000030026) #14	BGN (ENSTSYG00000030156) #15	ATP2B3 (ENSTSYG00000034877) #16	FAM58A (ENSTSYG00000026900) #17	DUSP9 (ENSTSYG00000026755) #18	PNCK (ENSTSYG00000034891) #19	ENSTSYG00000033997 #20	BCAP31 (ENSTSYG00000003985) #21	ABCD1 (ENSTSYG00000028624) #22	PLXNB3 (ENSTSYG00000032080) #23
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Lemuriformes_a	ANCESTRAL SPECIES	110				ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Greater bamboo lemur	MODERN SPECIES	265															BCAP31 (ENSPSMG00000023562) #21	ABCD1 (ENSPSMG00000023552) #22	ENSPSMG00000023542 #23	SRPK3 (ENSPSMG00000023528) #24	IDH3G (ENSPSMG00000023441) #25	SSR4 (ENSPSMG00000023367) #26	PDZD4 (ENSPSMG00000023341) #27	L1CAM (ENSPSMG00000023248) #28	ENSPSMG00000023102	AVPR2 (ENSPSMG00000023097) #29	ARHGAP4 (ENSPSMG00000023028) #30	NAA10 (ENSPSMG00000022912) #31	RENBP (ENSPSMG00000022840) #32	HCFC1 (ENSPSMG00000022815) #33	TMEM187 (ENSPSMG00000022767)	IRAK1 (ENSPSMG00000022745) #34	ENSPSMG00000022715
Coquerels sifaka	MODERN SPECIES	882				ENSPCOG00000020542	ENSPCOG00000025588	ENSPCOG00000018479	TREX2 (ENSPCOG00000022646) #13	HAUS7 (ENSPCOG00000016936) #14	BGN (ENSPCOG00000018303) #15	ATP2B3 (ENSPCOG00000022001) #16	CCNQ (ENSPCOG00000020959) #17	DUSP9 (ENSPCOG00000021779) #18	PNCK (ENSPCOG00000019463) #19	ENSPCOG00000024763 #20	BCAP31 (ENSPCOG00000017960) #21	ABCD1 (ENSPCOG00000016908) #22	PLXNB3 (ENSPCOG00000024468) #23	SRPK3 (ENSPCOG00000018569) #24	IDH3G (ENSPCOG00000023374) #25	SSR4 (ENSPCOG00000028866) #26	PDZD4 (ENSPCOG00000025180) #27	L1CAM (ENSPCOG00000010437) #28	AVPR2 (ENSPCOG00000008409) #29	ARHGAP4 (ENSPCOG00000009927) #30	ENSPCOG00000027024 #31	RENBP (ENSPCOG00000013414) #32	HCFC1 (ENSPCOG00000028065) #33	TMEM187 (ENSPCOG00000024026)	IRAK1 (ENSPCOG00000027349) #34	MECP2 (ENSPCOG00000024848) #35	ENSPCOG00000015866 #36
Mouse lemur	MODERN SPECIES	169	ENSMICG00000005862	NSDHL (ENSMICG00000005868)	ZNF185 (ENSMICG00000005873)	ENSMICG00000046490	ENSMICG00000046759	ZFP92 (ENSMICG00000011893) #12	TREX2 (ENSMICG00000038278) #13	HAUS7 (ENSMICG00000000008) #14	BGN (ENSMICG00000000009) #15	ATP2B3 (ENSMICG00000000010) #16	CCNQ (ENSMICG00000032354) #17	DUSP9 (ENSMICG00000044469) #18	PNCK (ENSMICG00000013947) #19	ENSMICG00000003428 #20	BCAP31 (ENSMICG00000003437) #21	ABCD1 (ENSMICG00000003441) #22	PLXNB3 (ENSMICG00000003449) #23	SRPK3 (ENSMICG00000003464) #24	IDH3G (ENSMICG00000003472) #25	SSR4 (ENSMICG00000003476) #26	PDZD4 (ENSMICG00000027183) #27	L1CAM (ENSMICG00000003486) #28	AVPR2 (ENSMICG00000037091) #29	ARHGAP4 (ENSMICG00000016246) #30	NAA10 (ENSMICG00000010278) #31	RENBP (ENSMICG00000033869) #32	HCFC1 (ENSMICG00000016286) #33	TMEM187 (ENSMICG00000033392)	IRAK1 (ENSMICG00000005136) #34	MECP2 (ENSMICG00000005149) #35	ENSMICG00000011536 #36
Bushbaby	MODERN SPECIES	364	ENSOGAG00000029555	ENSOGAG00000030548	ENSOGAG00000032682	ENSOGAG00000031649	ZFP92 (ENSOGAG00000029963) #12	TREX2 (ENSOGAG00000033175) #13	HAUS7 (ENSOGAG00000008917) #14	ENSOGAG00000029324	BGN (ENSOGAG00000008920) #15	ATP2B3 (ENSOGAG00000008921) #16	ENSOGAG00000033279 #17	DUSP9 (ENSOGAG00000002412) #18	PNCK (ENSOGAG00000006718) #19	ENSOGAG00000031270 #20	BCAP31 (ENSOGAG00000006721) #21	ABCD1 (ENSOGAG00000027153) #22	PLXNB3 (ENSOGAG00000003133) #23	SRPK3 (ENSOGAG00000003138) #24	ENSOGAG00000006735 #25	SSR4 (ENSOGAG00000006738) #26	PDZD4 (ENSOGAG00000006741) #27	L1CAM (ENSOGAG00000015077) #28	AVPR2 (ENSOGAG00000030887) #29	ARHGAP4 (ENSOGAG00000015087) #30	NAA10 (ENSOGAG00000013263) #31	RENBP (ENSOGAG00000032778) #32	HCFC1 (ENSOGAG00000015100) #33	TMEM187 (ENSOGAG00000026922)	IRAK1 (ENSOGAG00000015108) #34	MECP2 (ENSOGAG00000015115) #35	ENSOGAG00000000897 #36
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917
Suina	ANCESTRAL SPECIES	7	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35
Chacoan peccary	MODERN SPECIES	64									BGN (ENSCWAG00000015339) #15	ATP2B3 (ENSCWAG00000014036) #16	CCNQ (ENSCWAG00000013960) #17	DUSP9 (ENSCWAG00000013930) #18	PNCK (ENSCWAG00000013628) #19	ENSCWAG00000013485 #20	BCAP31 (ENSCWAG00000013428) #21	ABCD1 (ENSCWAG00000013367) #22	PLXNB3 (ENSCWAG00000013064) #23	SRPK3 (ENSCWAG00000012244) #24	IDH3G (ENSCWAG00000012166) #25	SSR4 (ENSCWAG00000012103) #26	PDZD4 (ENSCWAG00000011881) #27	L1CAM (ENSCWAG00000010938) #28	AVPR2 (ENSCWAG00000010837) #29	ARHGAP4 (ENSCWAG00000010083) #30	NAA10 (ENSCWAG00000009933) #31	RENBP (ENSCWAG00000009675) #32	HCFC1 (ENSCWAG00000009363) #33	TMEM187 (ENSCWAG00000009330)	IRAK1 (ENSCWAG00000009234) #34	ENSCWAG00000009215	MECP2 (ENSCWAG00000009014) #35
Pig	MODERN SPECIES	300	ENSSSCG00000048272	ENSSSCG00000059750	ENSSSCG00000057031	ENSSSCG00000035599	ENSSSCG00000049239	ENSSSCG00000030075	ZFP92 (ENSSSCG00000012768) #12	HAUS7 (ENSSSCG00000012767) #14	BGN (ENSSSCG00000012766) #15	SLC6A8 (ENSSSCG00000012771) #20	ATP2B3 (ENSSSCG00000012769) #16	CCNQ (ENSSSCG00000012770) #17	DUSP9 (ENSSSCG00000012774) #18	PNCK (ENSSSCG00000012773) #19	BCAP31 (ENSSSCG00000012772) #21	ABCD1 (ENSSSCG00000012779) #22	PLXNB3 (ENSSSCG00000012780) #23	ENSSSCG00000024676 #24	ENSSSCG00000053900 #24	IDH3G (ENSSSCG00000012783) #25	SSR4 (ENSSSCG00000012784) #26	PDZD4 (ENSSSCG00000012785) #27	L1CAM (ENSSSCG00000012787) #28	AVPR2 (ENSSSCG00000012789) #29	ARHGAP4 (ENSSSCG00000012790) #30	NAA10 (ENSSSCG00000012791) #31	RENBP (ENSSSCG00000012792) #32	HCFC1 (ENSSSCG00000012793) #33	ENSSSCG00000050581	IRAK1 (ENSSSCG00000012795) #34	ENSSSCG00000059337
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v.e.a #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v.e.a #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00950000185059.b.a.a	ENSGT00940000153582.b.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v.e.a #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36	ENSGT00940000162426 #37
Beluga whale	MODERN SPECIES	139	ZNF185 (ENSDLEG00000008571)	ENSDLEG00000008777	ENSDLEG00000008821	ENSDLEG00000008874	ENSDLEG00000008903 #11	ZFP92 (ENSDLEG00000008939) #12	TREX2 (ENSDLEG00000008947) #13	HAUS7 (ENSDLEG00000008961) #14	BGN (ENSDLEG00000009001) #15	ATP2B3 (ENSDLEG00000009068) #16	CCNQ (ENSDLEG00000009254) #17	DUSP9 (ENSDLEG00000009275) #18	PNCK (ENSDLEG00000009302) #19	ENSDLEG00000009357 #20	BCAP31 (ENSDLEG00000009436) #21	ABCD1 (ENSDLEG00000009490) #22	PLXNB3 (ENSDLEG00000009548) #23	SRPK3 (ENSDLEG00000009748) #24	IDH3G (ENSDLEG00000010539) #25	SSR4 (ENSDLEG00000010578) #26	PDZD4 (ENSDLEG00000010618) #27	L1CAM (ENSDLEG00000010633) #28	AVPR2 (ENSDLEG00000010715) #29	ARHGAP4 (ENSDLEG00000010745) #30	RENBP (ENSDLEG00000010782) #32	HCFC1 (ENSDLEG00000010826) #33	TMEM187 (ENSDLEG00000010884)	IRAK1 (ENSDLEG00000010892) #34	MECP2 (ENSDLEG00000010908) #35	ENSDLEG00000010916 #36	TKTL1 (ENSDLEG00000010974) #37
Narwhal	MODERN SPECIES	309	CETN2 (ENSMMNG00015011652)	NSDHL (ENSMMNG00015011668)	ENSMMNG00015011709	ENSMMNG00015011751	PNMA5 (ENSMMNG00015011762)	ZNF275 (ENSMMNG00015011779)	ENSMMNG00015011848 #12	TREX2 (ENSMMNG00015011851) #13	HAUS7 (ENSMMNG00015011870) #14	BGN (ENSMMNG00015011917) #15	ATP2B3 (ENSMMNG00015011983) #16	CCNQ (ENSMMNG00015012078) #17	DUSP9 (ENSMMNG00015012090) #18	PNCK (ENSMMNG00015012107) #19	BCAP31 (ENSMMNG00015012134) #21	ABCD1 (ENSMMNG00015012167) #22	PLXNB3 (ENSMMNG00015012205) #23	SRPK3 (ENSMMNG00015012303) #24	IDH3G (ENSMMNG00015012488) #25	SSR4 (ENSMMNG00015012518) #26	PDZD4 (ENSMMNG00015012532) #27	L1CAM (ENSMMNG00015012599) #28	AVPR2 (ENSMMNG00015012757) #29	ARHGAP4 (ENSMMNG00015012794) #30	RENBP (ENSMMNG00015012853) #32	HCFC1 (ENSMMNG00015012895) #33	TMEM187 (ENSMMNG00015012935)	IRAK1 (ENSMMNG00015012947) #34	MECP2 (ENSMMNG00015012982) #35	ENSMMNG00015013034 #36	ENSMMNG00015013048
Vaquita	MODERN SPECIES	34	ENSPSNG00000016703	ENSPSNG00000016766	ENSPSNG00000016858	ENSPSNG00000016906	ZNF275 (ENSPSNG00000016963)	ZFP92 (ENSPSNG00000017091) #12	TREX2 (ENSPSNG00000017121) #13	HAUS7 (ENSPSNG00000017146) #14	BGN (ENSPSNG00000017293) #15	ATP2B3 (ENSPSNG00000017785) #16	CCNQ (ENSPSNG00000020074) #17	DUSP9 (ENSPSNG00000020127) #18	PNCK (ENSPSNG00000020162) #19	ENSPSNG00000020216 #20	BCAP31 (ENSPSNG00000020287) #21	ABCD1 (ENSPSNG00000020339) #22	PLXNB3 (ENSPSNG00000020397) #23	SRPK3 (ENSPSNG00000020624) #24	IDH3G (ENSPSNG00000021007) #25	SSR4 (ENSPSNG00000021050) #26	PDZD4 (ENSPSNG00000021105) #27	L1CAM (ENSPSNG00000021249) #28	AVPR2 (ENSPSNG00000021500) #29	ARHGAP4 (ENSPSNG00000021560) #30	NAA10 (ENSPSNG00000021621) #31	ENSPSNG00000021660 #32	HCFC1 (ENSPSNG00000021713) #33	TMEM187 (ENSPSNG00000021804)	IRAK1 (ENSPSNG00000021819) #34	MECP2 (ENSPSNG00000021858) #35	ENSPSNG00000021893 #36
Dolphin	MODERN SPECIES	1323										ATP2B3 (ENSTTRG00000011664) #16	CCNQ (ENSTTRG00000011680) #17	DUSP9 (ENSTTRG00000011684) #18	PNCK (ENSTTRG00000011687) #19	ENSTTRG00000011689 #20	BCAP31 (ENSTTRG00000011698) #21	ABCD1 (ENSTTRG00000011702) #22	PLXNB3 (ENSTTRG00000011705) #23	SRPK3 (ENSTTRG00000011724) #24	IDH3G (ENSTTRG00000011728) #25
Sperm whale	MODERN SPECIES	13	ENSPCTG00005019056	CETN2 (ENSPCTG00005019083)	NSDHL (ENSPCTG00005019131)	ZNF185 (ENSPCTG00005019207)	ENSPCTG00005019540	ENSPCTG00005019569	ZFP92 (ENSPCTG00005019580) #12	HAUS7 (ENSPCTG00005019634) #14	BGN (ENSPCTG00005019735) #15	ATP2B3 (ENSPCTG00005019806) #16	CCNQ (ENSPCTG00005020427) #17	DUSP9 (ENSPCTG00005020457) #18	PNCK (ENSPCTG00005020491) #19	SLC6A8 (ENSPCTG00005020619) #20	BCAP31 (ENSPCTG00005020665) #21	ABCD1 (ENSPCTG00005020693) #22	PLXNB3 (ENSPCTG00005020721) #23	SRPK3 (ENSPCTG00005020896) #24	IDH3G (ENSPCTG00005021222) #25	SSR4 (ENSPCTG00005021260) #26	PDZD4 (ENSPCTG00005021324) #27	L1CAM (ENSPCTG00005021438) #28	AVPR2 (ENSPCTG00005021602) #29	ARHGAP4 (ENSPCTG00005021658) #30	NAA10 (ENSPCTG00005021859) #31	RENBP (ENSPCTG00005021884) #32	HCFC1 (ENSPCTG00005021915) #33	ENSPCTG00005022009 #34	MECP2 (ENSPCTG00005022045) #35	ENSPCTG00005022067 #36	TEX28 (ENSPCTG00005022073)
Blue whale	MODERN SPECIES	40	ENSBMSG00010021428	ENSBMSG00010021440	CETN2 (ENSBMSG00010021445)	NSDHL (ENSBMSG00010021450)	ZNF185 (ENSBMSG00010016223)	ZFP92 (ENSBMSG00010016386) #12	TREX2 (ENSBMSG00010016424) #13	HAUS7 (ENSBMSG00010016441) #14	BGN (ENSBMSG00010016563) #15	ATP2B3 (ENSBMSG00010016642) #16	CCNQ (ENSBMSG00010017295) #17	DUSP9 (ENSBMSG00010017328) #18	PNCK (ENSBMSG00010017371) #19	ENSBMSG00010017516 #20	BCAP31 (ENSBMSG00010017577) #21	ABCD1 (ENSBMSG00010017634) #22	PLXNB3 (ENSBMSG00010017695) #23	SRPK3 (ENSBMSG00010017917) #24	IDH3G (ENSBMSG00010018140) #25	SSR4 (ENSBMSG00010018296) #26	PDZD4 (ENSBMSG00010018349) #27	L1CAM (ENSBMSG00010018510) #28	AVPR2 (ENSBMSG00010018770) #29	ARHGAP4 (ENSBMSG00010018853) #30	NAA10 (ENSBMSG00010019439) #31	RENBP (ENSBMSG00010019364) #32	HCFC1 (ENSBMSG00010019528) #33	TMEM187 (ENSBMSG00010019836)	IRAK1 (ENSBMSG00010019854) #34	MECP2 (ENSBMSG00010019964) #35	ENSBMSG00010020090 #36
Pecora	ANCESTRAL SPECIES	38		ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Yarkand deer	MODERN SPECIES	1323	ENSCHYG00000026691	ENSCHYG00000026686	ENSCHYG00000026676	ENSCHYG00000026670 #11	ENSCHYG00000026662	ENSCHYG00000026653 #12	TREX2 (ENSCHYG00000026645) #13	HAUS7 (ENSCHYG00000026596) #14	BGN (ENSCHYG00000026554) #15	ATP2B3 (ENSCHYG00000026445) #16	CCNQ (ENSCHYG00000026390) #17	DUSP9 (ENSCHYG00000026372) #18	PNCK (ENSCHYG00000026358) #19	ENSCHYG00000026332 #20	ENSCHYG00000026299 #21	ABCD1 (ENSCHYG00000026259) #22	PLXNB3 (ENSCHYG00000026217) #23	SRPK3 (ENSCHYG00000026187) #24	ENSCHYG00000026148 #25	ENSCHYG00000026124 #26	PDZD4 (ENSCHYG00000026107) #27	L1CAM (ENSCHYG00000025877) #28	AVPR2 (ENSCHYG00000025838) #29	ARHGAP4 (ENSCHYG00000025566) #30	ENSCHYG00000025281 #31	RENBP (ENSCHYG00000025248) #32	HCFC1 (ENSCHYG00000025112) #33	IRAK1 (ENSCHYG00000024907) #34	MECP2 (ENSCHYG00000024843) #35	ENSCHYG00000024807 #36	TEX28 (ENSCHYG00000024783)
Percora_a	ANCESTRAL SPECIES	35		ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Siberian musk deer	MODERN SPECIES	14			ENSMMSG00000017989 #11	ENSMMSG00000017963	ENSMMSG00000017951	ENSMMSG00000017851	TREX2 (ENSMMSG00000017821) #13	HAUS7 (ENSMMSG00000017752) #14	BGN (ENSMMSG00000017708) #15	ATP2B3 (ENSMMSG00000017117) #16	CCNQ (ENSMMSG00000017061) #17	DUSP9 (ENSMMSG00000017038) #18	PNCK (ENSMMSG00000016992) #19	ENSMMSG00000016948 #20	BCAP31 (ENSMMSG00000016925) #21	ABCD1 (ENSMMSG00000016894) #22	PLXNB3 (ENSMMSG00000016798) #23	SRPK3 (ENSMMSG00000016477) #24	IDH3G (ENSMMSG00000016400) #25	SSR4 (ENSMMSG00000016336) #26	PDZD4 (ENSMMSG00000016210) #27	L1CAM (ENSMMSG00000015717) #28	AVPR2 (ENSMMSG00000015654) #29	ARHGAP4 (ENSMMSG00000015607) #30	NAA10 (ENSMMSG00000015542) #31	RENBP (ENSMMSG00000015497) #32	HCFC1 (ENSMMSG00000015453) #33	TMEM187 (ENSMMSG00000015428)	IRAK1 (ENSMMSG00000015351) #34	ENSMMSG00000015287 #35	ENSMMSG00000015261 #36
Bovidae	ANCESTRAL SPECIES	33		ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Caprinae	ANCESTRAL SPECIES	45	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020024990	ENSOARG00020024988	ENSOARG00020024977	ENSOARG00020024974	ENSOARG00020024952	ZFP92 (ENSOARG00020024935) #12	TREX2 (ENSOARG00020024928) #13	HAUS7 (ENSOARG00020024905) #14	BGN (ENSOARG00020024895) #15	ATP2B3 (ENSOARG00020024861) #16	CCNQ (ENSOARG00020024846) #17	DUSP9 (ENSOARG00020024837) #18	PNCK (ENSOARG00020024721) #19	ENSOARG00020024643 #20	BCAP31 (ENSOARG00020024614) #21	ABCD1 (ENSOARG00020024584) #22	PLXNB3 (ENSOARG00020024564) #23	IDH3G (ENSOARG00020024407) #25	SSR4 (ENSOARG00020024383) #26	PDZD4 (ENSOARG00020024315) #27	L1CAM (ENSOARG00020023921) #28	AVPR2 (ENSOARG00020023848) #29	ARHGAP4 (ENSOARG00020023326) #30	NAA10 (ENSOARG00020023246) #31	RENBP (ENSOARG00020023053) #32	HCFC1 (ENSOARG00020022415) #33	TMEM187 (ENSOARG00020022375)	IRAK1 (ENSOARG00020022349) #34	MECP2 (ENSOARG00020022209) #35	OPN1LW (ENSOARG00020022140) #36	TKTL1 (ENSOARG00020021994) #37
Goat	MODERN SPECIES	65											CCNQ (ENSCHIG00000016499) #17	DUSP9 (ENSCHIG00000012585) #18	PNCK (ENSCHIG00000003212) #19	ENSCHIG00000021442 #20	BCAP31 (ENSCHIG00000012576) #21	ABCD1 (ENSCHIG00000020085) #22	PLXNB3 (ENSCHIG00000012234) #23	SRPK3 (ENSCHIG00000002559) #24	IDH3G (ENSCHIG00000016785) #25	SSR4 (ENSCHIG00000006805) #26	PDZD4 (ENSCHIG00000000364) #27
Bovinae	ANCESTRAL SPECIES	46			ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Bos	ANCESTRAL SPECIES	36	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Bos_a	ANCESTRAL SPECIES	39	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Wild yak	MODERN SPECIES	2346												DUSP9 (ENSBMUG00000011871) #18	PNCK (ENSBMUG00000011937) #19	ENSBMUG00000011967 #20	BCAP31 (ENSBMUG00000011987) #21	ABCD1 (ENSBMUG00000012003) #22	PLXNB3 (ENSBMUG00000012298) #23	SRPK3 (ENSBMUG00000012477) #24	IDH3G (ENSBMUG00000012493) #25	SSR4 (ENSBMUG00000012499) #26	PDZD4 (ENSBMUG00000012542) #27	L1CAM (ENSBMUG00000012610) #28	AVPR2 (ENSBMUG00000012644) #29	ARHGAP4 (ENSBMUG00000012757) #30	NAA10 (ENSBMUG00000012855) #31	RENBP (ENSBMUG00000012951) #32
Domestic yak	MODERN SPECIES	69	DKC1 (ENSBGRG00000017777)	GAB3 (ENSBGRG00000018202)	ENSBGRG00000018336	ENSBGRG00000018361	ENSBGRG00000018441 #11	ENSBGRG00000018662 #12	HAUS7 (ENSBGRG00000018702) #14	ENSBGRG00000018982	BGN (ENSBGRG00000019034) #15	ATP2B3 (ENSBGRG00000019084) #16	CCNQ (ENSBGRG00000019445) #17	DUSP9 (ENSBGRG00000019532) #18	ENSBGRG00000019589 #19	ENSBGRG00000019737 #20	BCAP31 (ENSBGRG00000019806) #21	ABCD1 (ENSBGRG00000019899) #22	SRPK3 (ENSBGRG00000020582) #24	IDH3G (ENSBGRG00000020629) #25	ENSBGRG00000020770 #26	PDZD4 (ENSBGRG00000020897) #27	ENSBGRG00000020944	L1CAM (ENSBGRG00000020974) #28	AVPR2 (ENSBGRG00000021537) #29	ARHGAP4 (ENSBGRG00000021595) #30	NAA10 (ENSBGRG00000021764) #31	RENBP (ENSBGRG00000021852) #32	HCFC1 (ENSBGRG00000021965) #33	TMEM187 (ENSBGRG00000023012)	IRAK1 (ENSBGRG00000023042) #34	MECP2 (ENSBGRG00000023220) #35	ENSBGRG00000023305 #36
Bos_b	ANCESTRAL SPECIES	31	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Hybrid Bos Indicus	MODERN SPECIES	315	DKC1 (ENSBIXG00005011665)	GAB3 (ENSBIXG00005011700)	ENSBIXG00005011731	ENSBIXG00005001157 #11	ENSBIXG00005011758	ENSBIXG00005011766 #12	HAUS7 (ENSBIXG00005001172) #14	ENSBIXG00005011824	BGN (ENSBIXG00005011869) #15	ATP2B3 (ENSBIXG00005001219) #16	CCNQ (ENSBIXG00005012024) #17	ENSBIXG00005012054 #18	PNCK (ENSBIXG00005012167) #19	ENSBIXG00005012235 #20	BCAP31 (ENSBIXG00005012267) #21	ABCD1 (ENSBIXG00005001289) #22	PLXNB3 (ENSBIXG00005012308) #23	SRPK3 (ENSBIXG00005012339) #24	SSR4 (ENSBIXG00005012375) #26	PDZD4 (ENSBIXG00005012442) #27	ENSBIXG00005012493	L1CAM (ENSBIXG00005012618) #28	AVPR2 (ENSBIXG00005012700) #29	ARHGAP4 (ENSBIXG00005001429) #30	NAA10 (ENSBIXG00005012916) #31	RENBP (ENSBIXG00005007005) #32	HCFC1 (ENSBIXG00005013025) #33	TMEM187 (ENSBIXG00005013053)	IRAK1 (ENSBIXG00005013081) #34	ENSBIXG00005013100	MECP2 (ENSBIXG00005013169) #35
Cow	MODERN SPECIES	177	MPP1 (ENSBTAG00000013046)	DKC1 (ENSBTAG00000013045)	GAB3 (ENSBTAG00000013044)	ENSBTAG00000023820	ENSBTAG00000020185 #11	ENSBTAG00000047917	ENSBTAG00000050830 #12	HAUS7 (ENSBTAG00000014095) #14	BGN (ENSBTAG00000005250) #15	ATP2B3 (ENSBTAG00000000520) #16	CCNQ (ENSBTAG00000011350) #17	DUSP9 (ENSBTAG00000008319) #18	PNCK (ENSBTAG00000017430) #19	SLC6A8 (ENSBTAG00000009959) #20	BCAP31 (ENSBTAG00000020547) #21	ABCD1 (ENSBTAG00000020551) #22	PLXNB3 (ENSBTAG00000010146) #23	SRPK3 (ENSBTAG00000001058) #24	IDH3G (ENSBTAG00000001059) #25	SSR4 (ENSBTAG00000021421) #26	PDZD4 (ENSBTAG00000021422) #27	ENSBTAG00000038379	L1CAM (ENSBTAG00000013462) #28	AVPR2 (ENSBTAG00000047138) #29	ARHGAP4 (ENSBTAG00000047531) #30	NAA10 (ENSBTAG00000047702) #31	RENBP (ENSBTAG00000047827) #32	HCFC1 (ENSBTAG00000011904) #33	TMEM187 (ENSBTAG00000008278)	IRAK1 (ENSBTAG00000016085) #34	MECP2 (ENSBTAG00000047855) #35
Camelidae	ANCESTRAL SPECIES	80	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Arabian camel	MODERN SPECIES	204	ENSCDRG00005020698	ENSCDRG00005020708 #18	ENSCDRG00005020712	ENSCDRG00005020724	ENSCDRG00005020729	ENSCDRG00005020767 #11	ZFP92 (ENSCDRG00005020817) #12	TREX2 (ENSCDRG00005020829) #13	HAUS7 (ENSCDRG00005020839) #14	BGN (ENSCDRG00005020868) #15	ATP2B3 (ENSCDRG00005020884) #16	CCNQ (ENSCDRG00005020899) #17	PNCK (ENSCDRG00005020913) #19	ENSCDRG00005020937 #20	BCAP31 (ENSCDRG00005020943) #21	ABCD1 (ENSCDRG00005020958) #22	SRPK3 (ENSCDRG00005020984) #24	ENSCDRG00005008129	IDH3G (ENSCDRG00005008174) #25	SSR4 (ENSCDRG00005008385) #26	PDZD4 (ENSCDRG00005008529) #27	L1CAM (ENSCDRG00005008678) #28	AVPR2 (ENSCDRG00005009433) #29	ARHGAP4 (ENSCDRG00005009571) #30	NAA10 (ENSCDRG00005010090) #31	RENBP (ENSCDRG00005010267) #32	HCFC1 (ENSCDRG00005010537) #33	TMEM187 (ENSCDRG00005011270)	IRAK1 (ENSCDRG00005011306) #34	ENSCDRG00005011350	MECP2 (ENSCDRG00005011374) #35
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00910000144363	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT00910000146500	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Microbat	MODERN SPECIES	977	ENSMLUG00000025329	ENSMLUG00000023246	ENSMLUG00000025774	ENSMLUG00000006827	ENSMLUG00000028854	TREX2 (ENSMLUG00000027143) #13	ENSMLUG00000010516 #14	ENSMLUG00000025983	ENSMLUG00000010569 #15	ATP2B3 (ENSMLUG00000010583) #16	CCNQ (ENSMLUG00000012844) #17	DUSP9 (ENSMLUG00000008666) #18	PNCK (ENSMLUG00000008649) #19	ENSMLUG00000004391 #20	BCAP31 (ENSMLUG00000004416) #21	ABCD1 (ENSMLUG00000004423) #22	PLXNB3 (ENSMLUG00000004428) #23	SRPK3 (ENSMLUG00000004445) #24	ENSMLUG00000004457 #25	SSR4 (ENSMLUG00000004462) #26	PDZD4 (ENSMLUG00000004464) #27	L1CAM (ENSMLUG00000014234) #28	AVPR2 (ENSMLUG00000014253) #29	ARHGAP4 (ENSMLUG00000014257) #30	NAA10 (ENSMLUG00000014267) #31	RENBP (ENSMLUG00000014271) #32	HCFC1 (ENSMLUG00000014275) #33	TMEM187 (ENSMLUG00000014286)	IRAK1 (ENSMLUG00000014288) #34	MECP2 (ENSMLUG00000014297) #35	ENSMLUG00000024727
Greater horseshoe bat	MODERN SPECIES		PNMA3 (ENSRFEG00010005848)	ENSRFEG00010005818	ENSRFEG00010005799	ENSRFEG00010005753	ENSRFEG00010005702 #11	ENSRFEG00010005686	ENSRFEG00010005660	HAUS7 (ENSRFEG00010005503) #14	BGN (ENSRFEG00010005401) #15	ATP2B3 (ENSRFEG00010005284) #16	CCNQ (ENSRFEG00010005249) #17	DUSP9 (ENSRFEG00010005234) #18	PNCK (ENSRFEG00010005195) #19	ENSRFEG00010005165 #20	BCAP31 (ENSRFEG00010005136) #21	ABCD1 (ENSRFEG00010005067) #22	PLXNB3 (ENSRFEG00010005005) #23	SRPK3 (ENSRFEG00010004974) #24	IDH3G (ENSRFEG00010004950) #25	SSR4 (ENSRFEG00010004934) #26	PDZD4 (ENSRFEG00010004912) #27	L1CAM (ENSRFEG00010004838) #28	ENSRFEG00010004798	AVPR2 (ENSRFEG00010004785) #29	ARHGAP4 (ENSRFEG00010004760) #30	ARD1A (ENSRFEG00010004730) #31	RENBP (ENSRFEG00010004689) #32	HCFC1 (ENSRFEG00010004542) #33	TMEM187 (ENSRFEG00010004460)	IRAK1 (ENSRFEG00010004369) #34	MECP2 (ENSRFEG00010004285) #35
Megabat	MODERN SPECIES	2837															BCAP31 (ENSPVAG00000013157) #21	ABCD1 (ENSPVAG00000013159) #22	PLXNB3 (ENSPVAG00000013160) #23	SRPK3 (ENSPVAG00000013161) #24	IDH3G (ENSPVAG00000013163) #25	SSR4 (ENSPVAG00000013165) #26	PDZD4 (ENSPVAG00000013166) #27
Equus	ANCESTRAL SPECIES	52	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.hb.b	ENSGT00390000001700.a.b.b	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.ib	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000164248	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Horse	MODERN SPECIES	480	ENSECAG00000035483	ENSECAG00000056746	ENSECAG00000030904	ENSECAG00000028315	ENSECAG00000014611 #11	ZFP92 (ENSECAG00000015856) #12	HAUS7 (ENSECAG00000016027) #14	ECMX (ENSECAG00000018701)	BGN (ENSECAG00000018717) #15	ATP2B3 (ENSECAG00000023490) #16	CCNQ (ENSECAG00000026922) #17	DUSP9 (ENSECAG00000013650) #18	PNCK (ENSECAG00000036146) #19	SLC6A8 (ENSECAG00000013965) #20	BCAP31 (ENSECAG00000022787) #21	ABCD1 (ENSECAG00000022935) #22	PLXNB3 (ENSECAG00000000639) #23	SRPK3 (ENSECAG00000058187) #24	IDH3G (ENSECAG00000018509) #25	SSR4 (ENSECAG00000023150) #26	PDZD4 (ENSECAG00000024310) #27	L1CAM (ENSECAG00000002810) #28	AVPR2 (ENSECAG00000022974) #29	ARHGAP4 (ENSECAG00000023201) #30	NAA10 (ENSECAG00000015203) #31	RENBP (ENSECAG00000018888) #32	HCFC1 (ENSECAG00000022440) #33	TMEM187 (ENSECAG00000001086)	IRAK1 (ENSECAG00000009585) #34	MECP2 (ENSECAG00000018208) #35	OPN1LW (ENSECAG00000018684) #36
Donkey	MODERN SPECIES	36	ENSEASG00005031334	ENSEASG00005033113	ENSEASG00005026052	ENSEASG00005035618	ENSEASG00005023652 #11	ENSEASG00005036517 #12	TREX2 (ENSEASG00005019558) #13	HAUS7 (ENSEASG00005019556) #14	BGN (ENSEASG00005035268) #15	ATP2B3 (ENSEASG00005019538) #16	CCNQ (ENSEASG00005019537) #17	DUSP9 (ENSEASG00005019536) #18	PNCK (ENSEASG00005019534) #19	ENSEASG00005019533 #20	BCAP31 (ENSEASG00005019531) #21	ABCD1 (ENSEASG00005019529) #22	PLXNB3 (ENSEASG00005019471) #23	SRPK3 (ENSEASG00005019451) #24	IDH3G (ENSEASG00005019382) #25	SSR4 (ENSEASG00005019363) #26	PDZD4 (ENSEASG00005028120) #27	L1CAM (ENSEASG00005019353) #28	AVPR2 (ENSEASG00005027808) #29	ARHGAP4 (ENSEASG00005019296) #30	NAA10 (ENSEASG00005030165) #31	RENBP (ENSEASG00005019286) #32	HCFC1 (ENSEASG00005019244) #33	TMEM187 (ENSEASG00005038494)	IRAK1 (ENSEASG00005019196) #34	MECP2 (ENSEASG00005019188) #35	ENSEASG00005019183 #36
Carnivora	ANCESTRAL SPECIES	11	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Caniformia	ANCESTRAL SPECIES	22	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Ursidae	ANCESTRAL SPECIES	45	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B #11	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C.b #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c.h #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b.b #36
Ursus	ANCESTRAL SPECIES	211				ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C.b #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000155869.v #20	ENSGT00390000011863.c.h #21	ENSGT00950000182955.a.b.a #22	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1159															BCAP31 (ENSUAMG00000016228) #21	ENSUAMG00000016226 #22	ENSUAMG00000016225 #22	SRPK3 (ENSUAMG00000016190) #24	IDH3G (ENSUAMG00000016165) #25	SSR4 (ENSUAMG00000016144) #26	PDZD4 (ENSUAMG00000016140) #27
American black bear	MODERN SPECIES	1159														BCAP31 (ENSUAMG00000016228) #21	ENSUAMG00000016226 #22	ENSUAMG00000016225 #22	SRPK3 (ENSUAMG00000016190) #24	IDH3G (ENSUAMG00000016165) #25	SSR4 (ENSUAMG00000016144) #26	PDZD4 (ENSUAMG00000016140) #27
Giant Panda	MODERN SPECIES	2288	CETN2 (ENSAMEG00000000364)	NSDHL (ENSAMEG00000000343)	ZNF185 (ENSAMEG00000000294)	ENSAMEG00000000291	ENSAMEG00000024870 #11	ENSAMEG00000029889	ENSAMEG00000008936 #12	TREX2 (ENSAMEG00000008933) #13	HAUS7 (ENSAMEG00000008916) #14	BGN (ENSAMEG00000008895) #15	ATP2B3 (ENSAMEG00000008798) #16	CCNQ (ENSAMEG00000008792) #17	DUSP9 (ENSAMEG00000023668) #18	PNCK (ENSAMEG00000008740) #19	BCAP31 (ENSAMEG00000008719) #21	ABCD1 (ENSAMEG00000008692) #22	PLXNB3 (ENSAMEG00000018468) #23	SRPK3 (ENSAMEG00000018467) #24	IDH3G (ENSAMEG00000018466) #25	SSR4 (ENSAMEG00000018465) #26	PDZD4 (ENSAMEG00000018464) #27	ENSAMEG00000009528	L1CAM (ENSAMEG00000018461) #28	AVPR2 (ENSAMEG00000018460) #29	ARHGAP4 (ENSAMEG00000018458) #30	NAA10 (ENSAMEG00000018457) #31	RENBP (ENSAMEG00000018452) #32	HCFC1 (ENSAMEG00000018450) #33	TMEM187 (ENSAMEG00000019206)	IRAK1 (ENSAMEG00000018449) #34	MECP2 (ENSAMEG00000029148) #35
Mustelinae	ANCESTRAL SPECIES	108			ENSGT00390000001700.a.b.b	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
American mink	MODERN SPECIES	402				ENSNVIG00000024011	ENSNVIG00000024008	ENSNVIG00000024007	ZFP92 (ENSNVIG00000024006) #12	HAUS7 (ENSNVIG00000024002) #14	BGN (ENSNVIG00000023999) #15	ATP2B3 (ENSNVIG00000023990) #16	CCNQ (ENSNVIG00000023988) #17	DUSP9 (ENSNVIG00000023986) #18	PNCK (ENSNVIG00000023984) #19	ENSNVIG00000023983 #20	BAP31 (ENSNVIG00000023982) #21	ABCD1 (ENSNVIG00000023981) #22	PLXNB3 (ENSNVIG00000023976) #23	SRPK3 (ENSNVIG00000023970) #24	IDH3G (ENSNVIG00000023966) #25	SSR4 (ENSNVIG00000023964) #26	PDZD4 (ENSNVIG00000023958) #27	L1CAM (ENSNVIG00000023921) #28	AVPR2 (ENSNVIG00000023918) #29	ARHGAP4 (ENSNVIG00000023893) #30	NAA10 (ENSNVIG00000023879) #31	RENBP (ENSNVIG00000023874) #32	HCFC1 (ENSNVIG00000023869) #33	ENSNVIG00000023868	IRAK1 (ENSNVIG00000023867) #34	MECP2 (ENSNVIG00000023863) #35	ENSNVIG00000023859 #36
Ferret	MODERN SPECIES	531															BCAP31 (ENSMPUG00000008469) #21	ABCD1 (ENSMPUG00000008475) #22	PLXNB3 (ENSMPUG00000008484) #23	SRPK3 (ENSMPUG00000008795) #24	IDH3G (ENSMPUG00000008781) #25	ENSMPUG00000008803 #26	PDZD4 (ENSMPUG00000008855) #27	L1CAM (ENSMPUG00000008943) #28	ARHGAP4 (ENSMPUG00000008967) #30	AVPR2 (ENSMPUG00000008979) #29	NAA10 (ENSMPUG00000008989) #31	HCFC1 (ENSMPUG00000009029) #33	ENSMPUG00000009052	IRAK1 (ENSMPUG00000009059) #34	MECP2 (ENSMPUG00000009072) #35	ENSMPUG00000009081 #36	TEX28 (ENSMPUG00000009202)
Canidae	ANCESTRAL SPECIES	50	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b.m.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Red fox	DUPLICATION
Red fox	MODERN SPECIES	263			ENSVVUG00000029721	ENSVVUG00000029719	ENSVVUG00000029716	ZFP92 (ENSVVUG00000029715) #12	TREX2 (ENSVVUG00000029714) #13	HAUS7 (ENSVVUG00000029713) #14	BGN (ENSVVUG00000029707) #15	ATP2B3 (ENSVVUG00000029706) #16	CCNQ (ENSVVUG00000029705) #17	DUSP9 (ENSVVUG00000029702) #18	PNCK (ENSVVUG00000029700) #19	ENSVVUG00000029699 #20	ENSVVUG00000029696 #21	ENSVVUG00000029695 #22	ENSVVUG00000029694 #22	PLXNB3 (ENSVVUG00000029634) #23	IDH3G (ENSVVUG00000029622) #25	ENSVVUG00000029621 #26	PDZD4 (ENSVVUG00000029620) #27	L1CAM (ENSVVUG00000029611) #28	AVPR2 (ENSVVUG00000029607) #29	ARHGAP4 (ENSVVUG00000029605) #30	NAA10 (ENSVVUG00000029603) #31	RENBP (ENSVVUG00000029602) #32	HCFC1 (ENSVVUG00000029596) #33	TMEM187 (ENSVVUG00000029595)	IRAK1 (ENSVVUG00000029594) #34	MECP2 (ENSVVUG00000029591) #35	ENSVVUG00000029585 #36
Red fox	MODERN SPECIES	263		ENSVVUG00000029721	ENSVVUG00000029719	ENSVVUG00000029716	ZFP92 (ENSVVUG00000029715) #12	TREX2 (ENSVVUG00000029714) #13	HAUS7 (ENSVVUG00000029713) #14	BGN (ENSVVUG00000029707) #15	ATP2B3 (ENSVVUG00000029706) #16	CCNQ (ENSVVUG00000029705) #17	DUSP9 (ENSVVUG00000029702) #18	PNCK (ENSVVUG00000029700) #19	ENSVVUG00000029699 #20	ENSVVUG00000029696 #21	ENSVVUG00000029695 #22	ENSVVUG00000029694 #22	PLXNB3 (ENSVVUG00000029634) #23	IDH3G (ENSVVUG00000029622) #25	ENSVVUG00000029621 #26	PDZD4 (ENSVVUG00000029620) #27	L1CAM (ENSVVUG00000029611) #28	AVPR2 (ENSVVUG00000029607) #29	ARHGAP4 (ENSVVUG00000029605) #30	NAA10 (ENSVVUG00000029603) #31	RENBP (ENSVVUG00000029602) #32	HCFC1 (ENSVVUG00000029596) #33	TMEM187 (ENSVVUG00000029595)	IRAK1 (ENSVVUG00000029594) #34	MECP2 (ENSVVUG00000029591) #35	ENSVVUG00000029585 #36	TKTL1 (ENSVVUG00000029580) #37
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00390000001700.a.b.b.n	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b.m.b.a	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #12	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Dog	MODERN SPECIES	144	ENSCAFG00845022582	ENSCAFG00845022611	ENSCAFG00845022640	ENSCAFG00845022693	ENSCAFG00845022737	ENSCAFG00845022788	ENSCAFG00845022808	ZFP92 (ENSCAFG00845023007) #12	BGN (ENSCAFG00845023053) #15	ATP2B3 (ENSCAFG00845023172) #16	CCNQ (ENSCAFG00845023588) #17	DUSP9 (ENSCAFG00845023663) #18	ENSCAFG00845023730 #19	ENSCAFG00845023957 #20	BCAP31 (ENSCAFG00845024213) #21	ABCD1 (ENSCAFG00845024327) #22	PLXNB3 (ENSCAFG00845024556) #23	SRPK3 (ENSCAFG00845024967) #24	IDH3G (ENSCAFG00845025145) #25	SSR4 (ENSCAFG00845025375) #26	PDZD4 (ENSCAFG00845025486) #27	L1CAM (ENSCAFG00845025647) #28	AVPR2 (ENSCAFG00845026015) #29	ARHGAP4 (ENSCAFG00845026108) #30	RENBP (ENSCAFG00845026554) #31	HCFC1 (ENSCAFG00845026790) #33	TMEM187 (ENSCAFG00845027090)	IRAK1 (ENSCAFG00845027126) #34	MECP2 (ENSCAFG00845027255) #35	OPN1LW (ENSCAFG00845027363) #36	TEX28 (ENSCAFG00845027400)
Dingo	MODERN SPECIES	383	ZNF185 (ENSCAFG00020023207)	ENSCAFG00020023204	ENSCAFG00020023200	ENSCAFG00020023197	ENSCAFG00020023196	ENSCAFG00020023194 #12	TREX2 (ENSCAFG00020023190) #13	HAUS7 (ENSCAFG00020023188) #14	BGN (ENSCAFG00020023184) #15	ATP2B3 (ENSCAFG00020022993) #16	CCNQ (ENSCAFG00020022953) #17	DUSP9 (ENSCAFG00020022952) #18	PNCK (ENSCAFG00020022950) #19	ENSCAFG00020022949 #20	BCAP31 (ENSCAFG00020022946) #21	ABCD1 (ENSCAFG00020022942) #22	PLXNB3 (ENSCAFG00020022936) #23	SRPK3 (ENSCAFG00020022932) #24	IDH3G (ENSCAFG00020022931) #25	SSR4 (ENSCAFG00020022930) #26	PDZD4 (ENSCAFG00020022928) #27	L1CAM (ENSCAFG00020022925) #28	AVPR2 (ENSCAFG00020022923) #29	ARHGAP4 (ENSCAFG00020022156) #30	NAA10 (ENSCAFG00020022123) #31	RENBP (ENSCAFG00020022111) #32	HCFC1 (ENSCAFG00020022091) #33	IRAK1 (ENSCAFG00020022089) #34	MECP2 (ENSCAFG00020022079) #35	ENSCAFG00020022061 #36	TEX28 (ENSCAFG00020022059)
Felidae	ANCESTRAL SPECIES	29				ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Panthera	ANCESTRAL SPECIES	56				ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
Panthera_a	ANCESTRAL SPECIES	65				ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #11	ENSGT00390000012715.a #13	ENSGT00390000003937 #14	ENSGT00940000155311.C #15	ENSGT00940000160765 #16	ENSGT00940000155445 #17	ENSGT00940000161880 #18	ENSGT00940000162187 #19	ENSGT00940000155869.v #20	ENSGT00390000011863.c #21	ENSGT00950000182955.a.b.a #22	ENSGT01020000230394.e.a.a.b.a.b #23	ENSGT00940000157877.b #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00390000008992 #26	ENSGT00950000183062.a.b #27	ENSGT00940000157506 #28	ENSGT01050000244882.b.c.b #29	ENSGT00950000182824.a.b.b #30	ENSGT00550000074803 #31	ENSGT00390000013740 #32	ENSGT00940000161383 #33	ENSGT00390000011272	ENSGT00940000160502 #34	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #36
leopard	MODERN SPECIES	214				ENSPPRG00000013055	ENSPPRG00000013646	TREX2 (ENSPPRG00000017457) #13	HAUS7 (ENSPPRG00000014451) #14	BGN (ENSPPRG00000014620) #15	ATP2B3 (ENSPPRG00000024167) #16	CCNQ (ENSPPRG00000024044) #17	DUSP9 (ENSPPRG00000023875) #18	ENSPPRG00000000433 #19	PNCK (ENSPPRG00000002563) #19	ENSPPRG00000002840 #20	BCAP31 (ENSPPRG00000003191) #21	ABCD1 (ENSPPRG00000003214) #22	SRPK3 (ENSPPRG00000006472) #24	IDH3G (ENSPPRG00000007090) #25	SSR4 (ENSPPRG00000007302) #26	PDZD4 (ENSPPRG00000007757) #27	L1CAM (ENSPPRG00000010911) #28	ENSPPRG00000011145	AVPR2 (ENSPPRG00000011559) #29	ARHGAP4 (ENSPPRG00000019046) #30	NAA10 (ENSPPRG00000021297) #31	RENBP (ENSPPRG00000000874) #32	HCFC1 (ENSPPRG00000001673) #33	IRAK1 (ENSPPRG00000002790) #34	MECP2 (ENSPPRG00000004602) #35	ENSPPRG00000005526 #36	TKTL1 (ENSPPRG00000005619) #37
lion	MODERN SPECIES	50							TREX2 (ENSPLOG00000017143) #13	ENSPLOG00000017109 #14	BGN (ENSPLOG00000017044) #15	ATP2B3 (ENSPLOG00000016345) #16	CCNQ (ENSPLOG00000016196) #17	DUSP9 (ENSPLOG00000016155) #18	PNCK (ENSPLOG00000015960) #19	ENSPLOG00000015847 #20	BCAP31 (ENSPLOG00000015741) #21	ABCD1 (ENSPLOG00000015686) #22	PLXNB3 (ENSPLOG00000015318) #23	SRPK3 (ENSPLOG00000014529) #24	IDH3G (ENSPLOG00000014245) #25	SSR4 (ENSPLOG00000014154) #26	PDZD4 (ENSPLOG00000013907) #27	L1CAM (ENSPLOG00000013396) #28	AVPR2 (ENSPLOG00000013280) #29	ARHGAP4 (ENSPLOG00000012775) #30	NAA10 (ENSPLOG00000012684) #31	RENBP (ENSPLOG00000012442) #32	HCFC1 (ENSPLOG00000011916) #33	TMEM187 (ENSPLOG00000011845)	IRAK1 (ENSPLOG00000011465) #34	MECP2 (ENSPLOG00000011316) #35	ENSPLOG00000011231 #36
Tiger	MODERN SPECIES	495									ENSPTIG00000009101	TREX2 (ENSPTIG00000009039) #13	HAUS7 (ENSPTIG00000009010) #14	BGN (ENSPTIG00000008982) #15	ATP2B3 (ENSPTIG00000008852) #16	CCNQ (ENSPTIG00000008832) #17	BCAP31 (ENSPTIG00000008801) #21	ENSPTIG00000007840 #22
Cat	MODERN SPECIES	252	NSDHL (ENSFCAG00000004907)	ZNF185 (ENSFCAG00000004911)	ENSFCAG00000052684	PNMA3 (ENSFCAG00000003125)	ENSFCAG00000041838	ENSFCAG00000052212	ENSFCAG00000004665 #11	TREX2 (ENSFCAG00000018938) #13	HAUS7 (ENSFCAG00000004027) #14	ATP2B3 (ENSFCAG00000004031) #16	CCNQ (ENSFCAG00000004033) #17	DUSP9 (ENSFCAG00000004034) #18	PNCK (ENSFCAG00000004035) #19	ENSFCAG00000004036 #20	BCAP31 (ENSFCAG00000004037) #21	ABCD1 (ENSFCAG00000004038) #22	PLXNB3 (ENSFCAG00000004039) #23	SRPK3 (ENSFCAG00000043991) #24	IDH3G (ENSFCAG00000033410) #25	SSR4 (ENSFCAG00000004040) #26	ARHGAP4 (ENSFCAG00000011385) #30	L1CAM (ENSFCAG00000008614) #28	AVPR2 (ENSFCAG00000011384) #29	NAA10 (ENSFCAG00000028705) #31	RENBP (ENSFCAG00000018690) #32	HCFC1 (ENSFCAG00000011387) #33	TMEM187 (ENSFCAG00000011388)	IRAK1 (ENSFCAG00000010847) #34	MECP2 (ENSFCAG00000011389) #35	OPN1LW (ENSFCAG00000011390) #36	TEX28 (ENSFCAG00000044525)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182955.a.b.a #22
Hedgehog	MODERN SPECIES	589																ENSEEUG00000000825 #22