Vertebrata ANCESTRAL SPECIES 130 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 Gnathostomata ANCESTRAL SPECIES 29 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 Euteleostomi ANCESTRAL SPECIES 5 ENSGT00950000183166.a.a.a.b ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ENSGT00390000000583 Sarcopterygii ANCESTRAL SPECIES 23 ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ENSGT00390000000583 Tetrapoda ANCESTRAL SPECIES 15 ENSGT00950000183166.a.a.a.b ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ENSGT00390000000583 Amniota ANCESTRAL SPECIES 12 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Mammalia ANCESTRAL SPECIES 22 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Theria ANCESTRAL SPECIES 13 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Eutheria ANCESTRAL SPECIES 2 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Primates ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Simiiformes ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Catarrhini ANCESTRAL SPECIES 17 ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000155413.l.a.b ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000155413.l.a.b ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000155413.l.a.b ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Macaca ANCESTRAL SPECIES 17 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00530000063174.a.i.f ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000164709.a.b.b.a.a.b.a.a.a.a.a.a.a.b.b #9 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT01100000263543.a.g.a.a.a.a #13 ENSGT00950000182895.a.b.j.b.e.a #14 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT01100000263539.b.a.a.a.b.b.b.a.b.b.a.a.b #18 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.a.a #21 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.b.a.a.a.b.b #32 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Rhesus MODERN SPECIES 4 PPP4R3B (ENSMMUG00000007001) #7 PNPT1 (ENSMMUG00000007003) #8 ENSMMUG00000060312 #9 EFEMP1 (ENSMMUG00000016872) #10 ENSMMUG00000056218 #11 CCDC85A (ENSMMUG00000015888) #12 ENSMMUG00000064261 #13 ENSMMUG00000002024 #14 VRK2 (ENSMMUG00000002025) #15 ENSMMUG00000064756 #16 FANCL (ENSMMUG00000002026) #17 ENSMMUG00000060918 #18 BCL11A (ENSMMUG00000011303) #19 PAPOLG (ENSMMUG00000000498) #20 ENSMMUG00000057135 #21 REL (ENSMMUG00000010834) #22 ENSMMUG00000055963 #23 PUS10 (ENSMMUG00000005685) #24 ENSMMUG00000052940 #25 PEX13 (ENSMMUG00000005687) #26 SANBR (ENSMMUG00000021990) #27 C13H2orf74 (ENSMMUG00000041555) #28 AHSA2 (ENSMMUG00000008097) #29 USP34 (ENSMMUG00000008098) #30 XPO1 (ENSMMUG00000006941) #31 ENSMMUG00000059978 #32 ENSMMUG00000056178 #33 ENSMMUG00000063300 #34 FAM161A (ENSMMUG00000013972) #35 CCT4 (ENSMMUG00000013973) #36 COMMD1 (ENSMMUG00000030824) #37 Crab-eating macaque MODERN SPECIES 4 EFEMP1 (ENSMFAG00000044235) #10 CCDC85A (ENSMFAG00000044378) #12 ENSMFAG00000061252 ENSMFAG00000048944 #13 SUMO3 (ENSMFAG00000009821) #14 VRK2 (ENSMFAG00000031394) #15 FANCL (ENSMFAG00000042101) #17 ENSMFAG00000057303 #18 ENSMFAG00000050088 BCL11A (ENSMFAG00000016402) #19 ENSMFAG00000047975 ENSMFAG00000044508 ENSMFAG00000052777 ##9 PAPOLG (ENSMFAG00000042450) #20 ENSMFAG00000056134 #21 REL (ENSMFAG00000038696) #22 ENSMFAG00000064635 #25 PUS10 (ENSMFAG00000000611) #24 PEX13 (ENSMFAG00000042959) #26 SANBR (ENSMFAG00000007392) #27 C2orf74 (ENSMFAG00000034596) #28 ENSMFAG00000042177 #29 USP34 (ENSMFAG00000043581) #30 XPO1 (ENSMFAG00000038679) #31 ENSMFAG00000057809 #32 ENSMFAG00000061185 ##18 ENSMFAG00000063382 FAM161A (ENSMFAG00000028707) #35 CCT4 (ENSMFAG00000031348) #36 ENSMFAG00000056305 ENSMFAG00000016016 Pig-tailed macaque MODERN SPECIES 341 ENSMNEG00000038538 CCDC88A (ENSMNEG00000038308) CFAP36 (ENSMNEG00000039806) PPP4R3B (ENSMNEG00000030876) #7 PNPT1 (ENSMNEG00000038589) #8 EFEMP1 (ENSMNEG00000043412) #10 ENSMNEG00000004015 CCDC85A (ENSMNEG00000041770) #12 VRK2 (ENSMNEG00000042551) #15 FANCL (ENSMNEG00000028810) #17 ENSMNEG00000044442 BCL11A (ENSMNEG00000040327) #19 ENSMNEG00000036604 ENSMNEG00000041584 PAPOLG (ENSMNEG00000035939) #20 REL (ENSMNEG00000042843) #22 PUS10 (ENSMNEG00000043877) #24 PEX13 (ENSMNEG00000030840) #26 SANBR (ENSMNEG00000041924) #27 ENSMNEG00000033482 C2orf74 (ENSMNEG00000028498) #28 ENSMNEG00000042228 ENSMNEG00000036948 #29 ENSMNEG00000036676 #29 USP34 (ENSMNEG00000039067) #30 XPO1 (ENSMNEG00000030909) #31 FAM161A (ENSMNEG00000031037) #35 CCT4 (ENSMNEG00000044353) #36 COMMD1 (ENSMNEG00000024928) #37 B3GNT2 (ENSMNEG00000025770) TMEM17 (ENSMNEG00000040952) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a.b #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00950000182895.a.b.j.b.e.a #14 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00530000063174.a.i.f ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00390000008802.m.a.a ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000155413.l.a.b ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Olive baboon MODERN SPECIES 5 PPP4R3B (ENSPANG00000022844) #7 CFAP36 (ENSPANG00000022522) ENSPANG00000038384 #8 ENSPANG00000031278 EFEMP1 (ENSPANG00000022521) #10 ENSPANG00000041504 ENSPANG00000043733 ##16 CCDC85A (ENSPANG00000016914) #12 ENSPANG00000010717 #14 VRK2 (ENSPANG00000014544) #15 FANCL (ENSPANG00000021497) #17 ENSPANG00000021826 BCL11A (ENSPANG00000018170) #19 ENSPANG00000000672 PAPOLG (ENSPANG00000014543) #20 REL (ENSPANG00000006148) #22 PUS10 (ENSPANG00000018036) #24 PEX13 (ENSPANG00000022181) #26 ENSPANG00000017323 #27 ENSPANG00000039323 C2orf74 (ENSPANG00000035894) #28 ENSPANG00000016913 #29 USP34 (ENSPANG00000025375) #30 XPO1 (ENSPANG00000006892) #31 FAM161A (ENSPANG00000010259) #35 CCT4 (ENSPANG00000019105) #36 COMMD1 (ENSPANG00000006093) #37 B3GNT2 (ENSPANG00000007808) ENSPANG00000051251 ##16 TMEM17 (ENSPANG00000042367) EHBP1 (ENSPANG00000016912) Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a.b #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00530000063174.a.i.f ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000155413.l.a.b ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Sooty mangabey MODERN SPECIES 494 ENSCATG00000043541 MTIF2 (ENSCATG00000038926) ENSCATG00000030161 CCDC88A (ENSCATG00000031995) CFAP36 (ENSCATG00000038971) PPP4R3B (ENSCATG00000043841) #7 PNPT1 (ENSCATG00000031551) #8 EFEMP1 (ENSCATG00000017977) #10 CCDC85A (ENSCATG00000041791) #12 ENSCATG00000001923 VRK2 (ENSCATG00000033236) #15 FANCL (ENSCATG00000039130) #17 BCL11A (ENSCATG00000035456) #19 ENSCATG00000030944 PAPOLG (ENSCATG00000044395) #20 REL (ENSCATG00000035174) #22 PUS10 (ENSCATG00000045305) #24 PEX13 (ENSCATG00000039835) #26 SANBR (ENSCATG00000045345) #27 ENSCATG00000045334 C2orf74 (ENSCATG00000037754) #28 ENSCATG00000043938 #29 ENSCATG00000038823 #29 USP34 (ENSCATG00000042180) #30 ENSCATG00000013431 XPO1 (ENSCATG00000032674) #31 FAM161A (ENSCATG00000043996) #35 CCT4 (ENSCATG00000038933) #36 ENSCATG00000038149 COMMD1 (ENSCATG00000011551) #37 B3GNT2 (ENSCATG00000011785) Drill MODERN SPECIES 1245 VRK2 (ENSMLEG00000032178) #15 FANCL (ENSMLEG00000031190) #17 ENSMLEG00000038186 BCL11A (ENSMLEG00000035855) #19 ENSMLEG00000030509 PAPOLG (ENSMLEG00000039462) #20 ENSMLEG00000035996 REL (ENSMLEG00000009298) #22 ENSMLEG00000037480 #24 Vervet Monkey MODERN SPECIES 5 CLHC1 (ENSCSAG00000014126) ENSCSAG00000014143 MTIF2 (ENSCSAG00000014153) CCDC88A (ENSCSAG00000014162) CFAP36 (ENSCSAG00000014172) PPP4R3B (ENSCSAG00000014201) #7 PNPT1 (ENSCSAG00000014324) #8 EFEMP1 (ENSCSAG00000014365) #10 CCDC85A (ENSCSAG00000014374) #12 VRK2 (ENSCSAG00000014381) #15 FANCL (ENSCSAG00000014388) #17 ENSCSAG00000014395 #19 ENSCSAG00000019450 ENSCSAG00000019449 PAPOLG (ENSCSAG00000014408) #20 REL (ENSCSAG00000014415) #22 ENSCSAG00000014430 PUS10 (ENSCSAG00000014451) #24 PEX13 (ENSCSAG00000014465) #26 SANBR (ENSCSAG00000014480) #27 C2orf74 (ENSCSAG00000014493) #28 ENSCSAG00000014516 #29 USP34 (ENSCSAG00000014580) #30 XPO1 (ENSCSAG00000014606) #31 FAM161A (ENSCSAG00000014628) #35 CCT4 (ENSCSAG00000014640) #36 COMMD1 (ENSCSAG00000014646) #37 B3GNT2 (ENSCSAG00000019448) ENSCSAG00000019447 TMEM17 (ENSCSAG00000014653) EHBP1 (ENSCSAG00000014669) Rhinopithecus ANCESTRAL SPECIES 341 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153305.c.e.b ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000155413.l.a.b ENSGT00940000153408.B #31 Black snub-nosed monkey MODERN SPECIES 1441 VRK2 (ENSRBIG00000044680) #15 FANCL (ENSRBIG00000035665) #17 BCL11A (ENSRBIG00000016833) #19 PAPOLG (ENSRBIG00000040086) #20 REL (ENSRBIG00000001622) #22 PUS10 (ENSRBIG00000034187) #24 PEX13 (ENSRBIG00000010724) #26 ENSRBIG00000031375 SANBR (ENSRBIG00000033182) #27 C2orf74 (ENSRBIG00000043239) #28 ENSRBIG00000032791 #29 ENSRBIG00000031834 #29 ENSRBIG00000041431 USP34 (ENSRBIG00000025559) #30 XPO1 (ENSRBIG00000029189) #31 Golden snub-nosed monkey MODERN SPECIES 690 VRK2 (ENSRROG00000030751) #15 FANCL (ENSRROG00000033391) #17 ENSRROG00000041984 BCL11A (ENSRROG00000036743) #19 ENSRROG00000032000 PAPOLG (ENSRROG00000035954) #20 REL (ENSRROG00000027368) #22 PUS10 (ENSRROG00000039961) #24 PEX13 (ENSRROG00000031383) #26 SANBR (ENSRROG00000010642) #27 C2orf74 (ENSRROG00000033337) #28 ENSRROG00000043476 #29 ENSRROG00000038006 USP34 (ENSRROG00000043473) #30 XPO1 (ENSRROG00000038442) #31 Hominoidea ANCESTRAL SPECIES 18 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00910000147599 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000153727.b.n ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.w ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Hominidae ANCESTRAL SPECIES 19 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00910000147599 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000153727.b.n ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183099.u.a.d.b.c.a.b.b ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00910000147599 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000153727.b.n ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.x.b ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183099.u.a.d.b.c.a.b.b ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00910000147599 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000153727.b.n ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.x.b ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Pan ANCESTRAL SPECIES 17 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00910000147599 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000153727.b.n ENSGT00940000156983.a.a #19 ENSGT01030000234579.A.b.x.b ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000018318.u.b.a.b.a.a.a #23 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Bonobo MODERN SPECIES 14 ENSPPAG00000042489 CCDC88A (ENSPPAG00000039357) CFAP36 (ENSPPAG00000039542) PPP4R3B (ENSPPAG00000035885) #7 PNPT1 (ENSPPAG00000024705) #8 EFEMP1 (ENSPPAG00000032517) #10 CCDC85A (ENSPPAG00000031213) #12 ENSPPAG00000028192 VRK2 (ENSPPAG00000033421) #15 FANCL (ENSPPAG00000031399) #17 ENSPPAG00000034116 ENSPPAG00000040673 BCL11A (ENSPPAG00000034227) #19 ENSPPAG00000040162 PAPOLG (ENSPPAG00000019917) #20 REL (ENSPPAG00000027755) #22 ENSPPAG00000036115 #23 PUS10 (ENSPPAG00000026137) #24 PEX13 (ENSPPAG00000028208) #26 SANBR (ENSPPAG00000028445) #27 C2orf74 (ENSPPAG00000027440) #28 ENSPPAG00000038853 #29 ENSPPAG00000040060 #29 USP34 (ENSPPAG00000031846) #30 XPO1 (ENSPPAG00000029699) #31 FAM161A (ENSPPAG00000037442) #35 CCT4 (ENSPPAG00000036821) #36 COMMD1 (ENSPPAG00000043574) #37 B3GNT2 (ENSPPAG00000024510) TMEM17 (ENSPPAG00000011687) EHBP1 (ENSPPAG00000043965) Chimpanzee MODERN SPECIES 14 MTIF2 (ENSPTRG00000011929) ENSPTRG00000047403 CCDC88A (ENSPTRG00000011931) CFAP36 (ENSPTRG00000011932) PPP4R3B (ENSPTRG00000011933) #7 PNPT1 (ENSPTRG00000011934) #8 EFEMP1 (ENSPTRG00000042961) #10 CCDC85A (ENSPTRG00000011940) #12 ENSPTRG00000047509 VRK2 (ENSPTRG00000011941) #15 FANCL (ENSPTRG00000011942) #17 ENSPTRG00000049455 BCL11A (ENSPTRG00000011944) #19 ENSPTRG00000051789 PAPOLG (ENSPTRG00000011948) #20 REL (ENSPTRG00000011949) #22 ENSPTRG00000048311 #23 PUS10 (ENSPTRG00000011951) #24 PEX13 (ENSPTRG00000011952) #26 SANBR (ENSPTRG00000011954) #27 C2AH2orf74 (ENSPTRG00000033941) #28 ENSPTRG00000023268 #29 ENSPTRG00000050629 #29 USP34 (ENSPTRG00000011959) #30 XPO1 (ENSPTRG00000011962) #31 FAM161A (ENSPTRG00000011964) #35 CCT4 (ENSPTRG00000011965) #36 COMMD1 (ENSPTRG00000011966) #37 ENSPTRG00000045695 B3GNT2 (ENSPTRG00000051560) TMEM17 (ENSPTRG00000011968) Human MODERN SPECIES 11 EML6 (ENSG00000214595) RTN4 (ENSG00000115310) CLHC1 (ENSG00000162994) RPS27A (ENSG00000143947) MTIF2 (ENSG00000085760) CCDC88A (ENSG00000115355) CFAP36 (ENSG00000163001) PPP4R3B (ENSG00000275052) #7 PNPT1 (ENSG00000138035) #8 EFEMP1 (ENSG00000115380) #10 CCDC85A (ENSG00000055813) #12 VRK2 (ENSG00000028116) #15 FANCL (ENSG00000115392) #17 BCL11A (ENSG00000119866) #19 PAPOLG (ENSG00000115421) #20 REL (ENSG00000162924) #22 PUS10 (ENSG00000162927) #24 PEX13 (ENSG00000162928) #26 SANBR (ENSG00000162929) #27 C2orf74 (ENSG00000237651) #28 USP34 (ENSG00000115464) #30 XPO1 (ENSG00000082898) #31 FAM161A (ENSG00000170264) #35 CCT4 (ENSG00000115484) #36 COMMD1 (ENSG00000173163) #37 B3GNT2 (ENSG00000170340) TMEM17 (ENSG00000186889) EHBP1 (ENSG00000115504) OTX1 (ENSG00000115507) WDPCP (ENSG00000143951) MDH1 (ENSG00000014641) Gorilla MODERN SPECIES 14 ENSGGOG00000038295 CCDC88A (ENSGGOG00000012381) CFAP36 (ENSGGOG00000002684) PPP4R3B (ENSGGOG00000014676) #7 PNPT1 (ENSGGOG00000006867) #8 EFEMP1 (ENSGGOG00000022559) #10 ENSGGOG00000036302 CCDC85A (ENSGGOG00000011407) #12 VRK2 (ENSGGOG00000012141) #15 FANCL (ENSGGOG00000004094) #17 ENSGGOG00000039338 ENSGGOG00000040840 BCL11A (ENSGGOG00000007337) #19 ENSGGOG00000024123 PAPOLG (ENSGGOG00000006083) #20 REL (ENSGGOG00000024826) #22 PUS10 (ENSGGOG00000026131) #24 PEX13 (ENSGGOG00000006620) #26 SANBR (ENSGGOG00000024214) #27 C2orf74 (ENSGGOG00000023058) #28 ENSGGOG00000014565 #29 ENSGGOG00000037807 #29 USP34 (ENSGGOG00000014575) #30 XPO1 (ENSGGOG00000034878) #31 FAM161A (ENSGGOG00000013942) #35 CCT4 (ENSGGOG00000007003) #36 COMMD1 (ENSGGOG00000007602) #37 RPSA (ENSGGOG00000026707) B3GNT2 (ENSGGOG00000025266) ENSGGOG00000038261 EHBP1 (ENSGGOG00000034917) Orangutan MODERN SPECIES 14 CLHC1 (ENSPPYG00000012404) ENSPPYG00000031054 MTIF2 (ENSPPYG00000012403) ENSPPYG00000012402 CCDC88A (ENSPPYG00000012401) CFAP36 (ENSPPYG00000029888) PPP4R3B (ENSPPYG00000012400) #7 PNPT1 (ENSPPYG00000012399) #8 EFEMP1 (ENSPPYG00000012398) #10 CCDC85A (ENSPPYG00000012396) #12 VRK2 (ENSPPYG00000033504) #15 FANCL (ENSPPYG00000012394) #17 BCL11A (ENSPPYG00000012393) #19 ENSPPYG00000030113 PAPOLG (ENSPPYG00000012392) #20 REL (ENSPPYG00000012391) #22 PUS10 (ENSPPYG00000012390) #24 PEX13 (ENSPPYG00000034552) #26 SANBR (ENSPPYG00000012388) #27 C2orf74 (ENSPPYG00000035727) #28 ENSPPYG00000036113 #29 USP34 (ENSPPYG00000012384) #30 XPO1 (ENSPPYG00000012383) #31 FAM161A (ENSPPYG00000012382) #35 CCT4 (ENSPPYG00000012381) #36 COMMD1 (ENSPPYG00000012380) #37 ENSPPYG00000019018 B3GNT2 (ENSPPYG00000012379) TMEM17 (ENSPPYG00000012378) EHBP1 (ENSPPYG00000012377) ENSPPYG00000030010 Gibbon MODERN SPECIES 4 MTIF2 (ENSNLEG00000009228) ENSNLEG00000036115 CCDC88A (ENSNLEG00000009231) ENSNLEG00000009324 PPP4R3B (ENSNLEG00000009338) #7 PNPT1 (ENSNLEG00000009354) #8 EFEMP1 (ENSNLEG00000009393) #10 CCDC85A (ENSNLEG00000009421) #12 ENSNLEG00000035656 VRK2 (ENSNLEG00000009430) #15 ENSNLEG00000009472 #17 ENSNLEG00000028402 BCL11A (ENSNLEG00000029846) #19 ENSNLEG00000009505 ENSNLEG00000009507 #20 REL (ENSNLEG00000009519) #22 ENSNLEG00000035207 #23 PUS10 (ENSNLEG00000009527) #24 PEX13 (ENSNLEG00000009552) #26 SANBR (ENSNLEG00000009560) #27 C2orf74 (ENSNLEG00000009582) #28 ENSNLEG00000034163 #29 ENSNLEG00000027829 #29 USP34 (ENSNLEG00000009598) #30 XPO1 (ENSNLEG00000009680) #31 FAM161A (ENSNLEG00000009719) #35 CCT4 (ENSNLEG00000009723) #36 COMMD1 (ENSNLEG00000033234) #37 B3GNT2 (ENSNLEG00000035442) TMEM17 (ENSNLEG00000009759) EHBP1 (ENSNLEG00000009764) Platyrrhini ANCESTRAL SPECIES 13 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529.o #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029.h #37 ENSGT00940000155345.m ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Cebidae ANCESTRAL SPECIES 15 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529.o #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029.h #37 ENSGT00940000155345.m ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Cebidae_a ANCESTRAL SPECIES 30 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001.a #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529.o #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00900000141074.e.b.a ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029.h #37 ENSGT00940000155345.m ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Capuchin MODERN SPECIES 175 ENSCCAG00000025113 VRK2 (ENSCCAG00000000045) #15 FANCL (ENSCCAG00000028480) #17 ENSCCAG00000034211 BCL11A (ENSCCAG00000037622) #19 ENSCCAG00000028577 PAPOLG (ENSCCAG00000026893) #20 REL (ENSCCAG00000023238) #22 PUS10 (ENSCCAG00000023679) #24 PEX13 (ENSCCAG00000024187) #26 SANBR (ENSCCAG00000036557) #27 C2orf74 (ENSCCAG00000032740) #28 ENSCCAG00000037196 #29 ENSCCAG00000023738 #29 USP34 (ENSCCAG00000025282) #30 XPO1 (ENSCCAG00000037445) #31 Bolivian squirrel monkey MODERN SPECIES 48 MTIF2 (ENSSBOG00000026993) ENSSBOG00000035508 CCDC88A (ENSSBOG00000019821) CFAP36 (ENSSBOG00000027295) PPP4R3B (ENSSBOG00000027070) #7 PNPT1 (ENSSBOG00000032574) #8 EFEMP1 (ENSSBOG00000025793) #10 CCDC85A (ENSSBOG00000024988) #12 VRK2 (ENSSBOG00000021590) #15 FANCL (ENSSBOG00000020655) #17 ENSSBOG00000019621 ENSSBOG00000016171 ENSSBOG00000035616 BCL11A (ENSSBOG00000020438) #19 PAPOLG (ENSSBOG00000026194) #20 REL (ENSSBOG00000036176) #22 PUS10 (ENSSBOG00000014791) #24 PEX13 (ENSSBOG00000026445) #26 SANBR (ENSSBOG00000025340) #27 C2orf74 (ENSSBOG00000026818) #28 ENSSBOG00000029475 #29 USP34 (ENSSBOG00000034202) #30 ENSSBOG00000020979 XPO1 (ENSSBOG00000034467) #31 ENSSBOG00000010136 FAM161A (ENSSBOG00000034089) #35 CCT4 (ENSSBOG00000026025) #36 COMMD1 (ENSSBOG00000032499) #37 ENSSBOG00000019927 TMEM17 (ENSSBOG00000026954) EHBP1 (ENSSBOG00000027993) Marmoset MODERN SPECIES 5 MTIF2 (ENSCJAG00000010030) ENSCJAG00000022366 CCDC88A (ENSCJAG00000009891) CFAP36 (ENSCJAG00000009868) PPP4R3B (ENSCJAG00000009837) #7 PNPT1 (ENSCJAG00000009740) #8 EFEMP1 (ENSCJAG00000009690) #10 CCDC85A (ENSCJAG00000009663) #12 ENSCJAG00000058631 ENSCJAG00000079387 VRK2 (ENSCJAG00000009299) #15 FANCL (ENSCJAG00000009275) #17 ENSCJAG00000080516 BCL11A (ENSCJAG00000009226) #19 PAPOLG (ENSCJAG00000009102) #20 REL (ENSCJAG00000008975) #22 PUS10 (ENSCJAG00000009054) #24 PEX13 (ENSCJAG00000009037) #26 SANBR (ENSCJAG00000009029) #27 C2orf74 (ENSCJAG00000042078) #28 USP34 (ENSCJAG00000044195) #30 XPO1 (ENSCJAG00000008877) #31 FAM161A (ENSCJAG00000008852) #35 CCT4 (ENSCJAG00000008703) #36 ENSCJAG00000060745 #37 COMMD1 (ENSCJAG00000008693) #37 B3GNT2 (ENSCJAG00000046682) TMEM17 (ENSCJAG00000045778) ENSCJAG00000077815 EHBP1 (ENSCJAG00000008586) OTX1 (ENSCJAG00000083222) Mas night monkey MODERN SPECIES 655 ENSANAG00000038191 MTIF2 (ENSANAG00000036247) ENSANAG00000037903 CCDC88A (ENSANAG00000034572) CFAP36 (ENSANAG00000038033) PPP4R3B (ENSANAG00000037112) #7 PNPT1 (ENSANAG00000023709) #8 EFEMP1 (ENSANAG00000026183) #10 CCDC85A (ENSANAG00000035494) #12 VRK2 (ENSANAG00000031491) #15 FANCL (ENSANAG00000035956) #17 BCL11A (ENSANAG00000033679) #19 ENSANAG00000025908 ENSANAG00000034957 PAPOLG (ENSANAG00000024627) #20 REL (ENSANAG00000030350) #22 ENSANAG00000034924 #24 PEX13 (ENSANAG00000022255) #26 SANBR (ENSANAG00000030682) #27 C2orf74 (ENSANAG00000032268) #28 ENSANAG00000036395 #29 ENSANAG00000023187 #29 USP34 (ENSANAG00000028238) #30 ENSANAG00000019334 XPO1 (ENSANAG00000020802) #31 ENSANAG00000026753 FAM161A (ENSANAG00000033665) #35 CCT4 (ENSANAG00000036567) #36 COMMD1 (ENSANAG00000030463) #37 ENSANAG00000018780 ENSANAG00000036675 Tarsier MODERN SPECIES 6892 REL (ENSTSYG00000012918) #22 PUS10 (ENSTSYG00000004952) #24 PEX13 (ENSTSYG00000008935) #26 SANBR (ENSTSYG00000014346) #27 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Lemuriformes ANCESTRAL SPECIES 19 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Lemuriformes_a ANCESTRAL SPECIES 52 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00390000007888.c.a.l ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Greater bamboo lemur MODERN SPECIES 110 PPP4R3B (ENSPSMG00000014906) #7 ENSPSMG00000014688 #8 EFEMP1 (ENSPSMG00000014682) #10 CCDC85A (ENSPSMG00000014659) #12 VRK2 (ENSPSMG00000014589) #15 FANCL (ENSPSMG00000014519) #17 BCL11A (ENSPSMG00000014400) #19 ENSPSMG00000014323 PAPOLG (ENSPSMG00000014309) #20 REL (ENSPSMG00000014248) #22 PUS10 (ENSPSMG00000014223) #24 PEX13 (ENSPSMG00000014186) #26 SANBR (ENSPSMG00000014173) #27 C2orf74 (ENSPSMG00000014130) #28 ENSPSMG00000014118 #29 ENSPSMG00000014116 #29 USP34 (ENSPSMG00000014044) #30 XPO1 (ENSPSMG00000013942) #31 FAM161A (ENSPSMG00000013859) #35 CCT4 (ENSPSMG00000013804) #36 COMMD1 (ENSPSMG00000013664) #37 B3GNT2 (ENSPSMG00000013657) TMEM17 (ENSPSMG00000013649) Coquerels sifaka MODERN SPECIES 157 VRK2 (ENSPCOG00000023369) #15 FANCL (ENSPCOG00000007541) #17 BCL11A (ENSPCOG00000028073) #19 ENSPCOG00000013895 PAPOLG (ENSPCOG00000027306) #20 REL (ENSPCOG00000023844) #22 PUS10 (ENSPCOG00000027006) #24 PEX13 (ENSPCOG00000023862) #26 SANBR (ENSPCOG00000016045) #27 C2orf74 (ENSPCOG00000019501) #28 ENSPCOG00000019004 #29 ENSPCOG00000014897 #29 USP34 (ENSPCOG00000019384) #30 ENSPCOG00000026732 XPO1 (ENSPCOG00000023123) #31 FAM161A (ENSPCOG00000025568) #35 CCT4 (ENSPCOG00000024760) #36 COMMD1 (ENSPCOG00000002593) #37 TMEM17 (ENSPCOG00000003689) EHBP1 (ENSPCOG00000013807) OTX1 (ENSPCOG00000007128) Mouse lemur MODERN SPECIES 26 ENSMICG00000032298 MTIF2 (ENSMICG00000017441) ENSMICG00000017443 CCDC88A (ENSMICG00000017444) CFAP36 (ENSMICG00000017446) PPP4R3B (ENSMICG00000009332) #7 PNPT1 (ENSMICG00000009369) #8 EFEMP1 (ENSMICG00000015820) #10 CCDC85A (ENSMICG00000029777) #12 VRK2 (ENSMICG00000015032) #15 FANCL (ENSMICG00000015042) #17 ENSMICG00000047286 BCL11A (ENSMICG00000015052) #19 ENSMICG00000044285 PAPOLG (ENSMICG00000010042) #20 REL (ENSMICG00000010062) #22 PUS10 (ENSMICG00000010073) #24 PEX13 (ENSMICG00000042434) #26 SANBR (ENSMICG00000016768) #27 ENSMICG00000034983 #28 ENSMICG00000044675 #29 ENSMICG00000007130 #29 USP34 (ENSMICG00000007137) #30 XPO1 (ENSMICG00000027770) #31 FAM161A (ENSMICG00000032665) #35 ENSMICG00000015263 #36 COMMD1 (ENSMICG00000036432) #37 TMEM17 (ENSMICG00000045940) ENSMICG00000035187 EHBP1 (ENSMICG00000011224) ENSMICG00000036558 Bushbaby MODERN SPECIES 139 ENSOGAG00000002719 CLHC1 (ENSOGAG00000004301) MTIF2 (ENSOGAG00000004306) CCDC88A (ENSOGAG00000004308) CFAP36 (ENSOGAG00000009833) PPP4R3B (ENSOGAG00000009837) #7 PNPT1 (ENSOGAG00000009840) #8 EFEMP1 (ENSOGAG00000000054) #10 CCDC85A (ENSOGAG00000026544) #12 ENSOGAG00000016063 #15 FANCL (ENSOGAG00000016066) #17 ENSOGAG00000028600 ENSOGAG00000026311 BCL11A (ENSOGAG00000024696) #19 PAPOLG (ENSOGAG00000003145) #20 REL (ENSOGAG00000013722) #22 PUS10 (ENSOGAG00000013726) #24 PEX13 (ENSOGAG00000032082) #26 SANBR (ENSOGAG00000013736) #27 C2orf74 (ENSOGAG00000033349) #28 ENSOGAG00000012906 #29 USP34 (ENSOGAG00000012908) #30 XPO1 (ENSOGAG00000000143) #31 FAM161A (ENSOGAG00000024144) #35 CCT4 (ENSOGAG00000003974) #36 COMMD1 (ENSOGAG00000029292) #37 ENSOGAG00000028774 TMEM17 (ENSOGAG00000015014) EHBP1 (ENSOGAG00000005236) OTX1 (ENSOGAG00000027686) WDPCP (ENSOGAG00000026615) Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Glires ANCESTRAL SPECIES 13 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Rodentia ANCESTRAL SPECIES 15 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Myomorpha ANCESTRAL SPECIES 24 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Muroidea ANCESTRAL SPECIES 21 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Cricetidae ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00950000183166.a.a.a.b ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Northern American deer mouse MODERN SPECIES 1 Prorsd1 (ENSPEMG00000022883) Ccdc88a (ENSPEMG00000023244) ENSPEMG00000025189 Cfap36 (ENSPEMG00000019190) Ppp4r3b (ENSPEMG00000008100) #7 Pnpt1 (ENSPEMG00000004284) #8 Efemp1 (ENSPEMG00000008361) #10 ENSPEMG00000009148 Ccdc85a (ENSPEMG00000013322) #12 Vrk2 (ENSPEMG00000001459) #15 Fancl (ENSPEMG00000008881) #17 ENSPEMG00000026070 Bcl11a (ENSPEMG00000008063) #19 ENSPEMG00000027866 ENSPEMG00000008960 #20 Rel (ENSPEMG00000009851) #22 Pus10 (ENSPEMG00000013145) #24 Pex13 (ENSPEMG00000018236) #26 Sanbr (ENSPEMG00000002385) #27 1700093K21Rik (ENSPEMG00000004943) #28 Ahsa2 (ENSPEMG00000008242) #29 Usp34 (ENSPEMG00000013241) #30 Xpo1 (ENSPEMG00000010103) #31 ENSPEMG00000011408 #35 Cct4 (ENSPEMG00000014381) #36 Commd1 (ENSPEMG00000008857) #37 ENSPEMG00000013373 B3gnt2 (ENSPEMG00000030694) ENSPEMG00000029232 Tmem17 (ENSPEMG00000012666) Ehbp1 (ENSPEMG00000014061) Prairie vole MODERN SPECIES 105 Cfap36 (ENSMOCG00000012854) ENSMOCG00000021426 #7 Pnpt1 (ENSMOCG00000002820) #8 Efemp1 (ENSMOCG00000012514) #10 Ccdc85a (ENSMOCG00000006710) #12 ENSMOCG00000022710 ENSMOCG00000000981 Vrk2 (ENSMOCG00000019252) #15 Fancl (ENSMOCG00000008787) #17 Bcl11a (ENSMOCG00000017682) #19 Papolg (ENSMOCG00000006857) #20 Rel (ENSMOCG00000008399) #22 Pus10 (ENSMOCG00000008977) #24 Pex13 (ENSMOCG00000018906) #26 Cricetinae ANCESTRAL SPECIES 37 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Chinese hamster chok1gshd MODERN SPECIES 121 Mtif2 (ENSCGRG00001019217) Prorsd1 (ENSCGRG00001001634) Ccdc88a (ENSCGRG00001024375) Cfap36 (ENSCGRG00001018180) Ppp4r3b (ENSCGRG00001001075) #7 Pnpt1 (ENSCGRG00001012245) #8 Efemp1 (ENSCGRG00001021048) #10 Ccdc85a (ENSCGRG00001018553) #12 ENSCGRG00001024293 ENSCGRG00001021821 Vrk2 (ENSCGRG00001013709) #15 Fancl (ENSCGRG00001020523) #17 Bcl11a (ENSCGRG00001014052) #19 Papolg (ENSCGRG00001014951) #20 ENSCGRG00001011053 Rel (ENSCGRG00001012159) #22 Pus10 (ENSCGRG00001015226) #24 Pex13 (ENSCGRG00001006134) #26 Sanbr (ENSCGRG00001018010) #27 1700093K21Rik (ENSCGRG00001014409) #28 Ahsa2 (ENSCGRG00001004669) #29 Usp34 (ENSCGRG00001006322) #30 Xpo1 (ENSCGRG00001000263) #31 ENSCGRG00001013463 #35 Cct4 (ENSCGRG00001016718) #36 ENSCGRG00001007132 Commd1 (ENSCGRG00001007842) #37 B3gnt2 (ENSCGRG00001005196) ENSCGRG00001025059 Tmem17 (ENSCGRG00001024384) Ehbp1 (ENSCGRG00001022633) Golden Hamster MODERN SPECIES 639 ENSMAUG00000007930 Mtif2 (ENSMAUG00000014969) Prorsd1 (ENSMAUG00000008530) Ccdc88a (ENSMAUG00000013658) Cfap36 (ENSMAUG00000013908) Ppp4r3b (ENSMAUG00000019092) #7 Pnpt1 (ENSMAUG00000013652) #8 ENSMAUG00000013186 Efemp1 (ENSMAUG00000019647) #10 Ccdc85a (ENSMAUG00000020899) #12 ENSMAUG00000001312 Vrk2 (ENSMAUG00000013376) #15 Fancl (ENSMAUG00000012141) #17 Bcl11a (ENSMAUG00000010170) #19 Papolg (ENSMAUG00000009088) #20 Rel (ENSMAUG00000020172) #22 Pus10 (ENSMAUG00000007507) #24 ENSMAUG00000009603 #26 ENSMAUG00000007138 #27 1700093K21Rik (ENSMAUG00000002621) #28 Ahsa2 (ENSMAUG00000019192) #29 Usp34 (ENSMAUG00000015413) #30 Xpo1 (ENSMAUG00000006769) #31 ENSMAUG00000012775 #35 Cct4 (ENSMAUG00000000518) #36 Commd1 (ENSMAUG00000010569) #37 B3gnt2 (ENSMAUG00000002963) Tmem17 (ENSMAUG00000003448) Ehbp1 (ENSMAUG00000000935) Otx1 (ENSMAUG00000019114) Wdpcp (ENSMAUG00000011349) Murinae ANCESTRAL SPECIES 12 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Mus ANCESTRAL SPECIES 14 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00860000136227 ENSGT00390000005537 #17 ENSGT00860000136277 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Mus_A ANCESTRAL SPECIES 2 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00860000136227 ENSGT00390000005537 #17 ENSGT00860000136277 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Mus_B ANCESTRAL SPECIES 2 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00860000136227 ENSGT00390000005537 #17 ENSGT00860000136277 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Mus_C ANCESTRAL SPECIES 3 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00860000136227 ENSGT00390000005537 #17 ENSGT00860000136277 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Steppe mouse MODERN SPECIES 3247 Vrk2 (ENSMSIG00000016313) #15 ENSMSIG00000016327 Fancl (ENSMSIG00000016331) #17 ENSMSIG00000016372 5730522E02Rik (ENSMSIG00000016387) ENSMSIG00000016428 Bcl11a (ENSMSIG00000016492) #19 A830031A19Rik (ENSMSIG00000016521) Papolg (ENSMSIG00000016545) #20 Rel (ENSMSIG00000016632) #22 Pus10 (ENSMSIG00000016644) #24 Pex13 (ENSMSIG00000016726) #26 Sanbr (ENSMSIG00000016739) #27 1700093K21Rik (ENSMSIG00000016897) #28 Ahsa2 (ENSMSIG00000016929) #29 ENSMSIG00000016975 #30 spretus MODERN SPECIES 2 Mtif2 (MGP_SPRETEiJ_G0017001) Prorsd1 (MGP_SPRETEiJ_G0017000) Ccdc88a (MGP_SPRETEiJ_G0016999) Cfap36 (MGP_SPRETEiJ_G0016998) Ppp4r3b (MGP_SPRETEiJ_G0016997) #7 Pnpt1 (MGP_SPRETEiJ_G0016996) #8 Efemp1 (MGP_SPRETEiJ_G0016995) #10 Ccdc85a (MGP_SPRETEiJ_G0016994) #12 MGP_SPRETEiJ_G0016993 Vrk2 (MGP_SPRETEiJ_G0016992) #15 Fancl (MGP_SPRETEiJ_G0016991) #17 5730522E02Rik (MGP_SPRETEiJ_G0016990) Bcl11a (MGP_SPRETEiJ_G0016989) #19 A830031A19Rik (MGP_SPRETEiJ_G0016988) Papolg (MGP_SPRETEiJ_G0016987) #20 Rel (MGP_SPRETEiJ_G0016986) #22 Pus10 (MGP_SPRETEiJ_G0016985) #24 MGP_SPRETEiJ_G0016984 #26 Sanbr (MGP_SPRETEiJ_G0016983) #27 1700093K21Rik (MGP_SPRETEiJ_G0016982) #28 Ahsa2 (MGP_SPRETEiJ_G0016981) #29 Usp34 (MGP_SPRETEiJ_G0016980) #30 Xpo1 (MGP_SPRETEiJ_G0016979) #31 MGP_SPRETEiJ_G0016978 #35 Cct4 (MGP_SPRETEiJ_G0016977) #36 MGP_SPRETEiJ_G0016976 Commd1 (MGP_SPRETEiJ_G0016975) #37 MGP_SPRETEiJ_G0016974 #37 B3gnt2 (MGP_SPRETEiJ_G0016973) MGP_SPRETEiJ_G0016972 Tmem17 (MGP_SPRETEiJ_G0016971) Mouse MODERN SPECIES 2 Rps27a (ENSMUSG00000020460) Mtif2 (ENSMUSG00000020459) Prorsd1 (ENSMUSG00000032673) Ccdc88a (ENSMUSG00000032740) Cfap36 (ENSMUSG00000020462) Ppp4r3b (ENSMUSG00000020463) #7 Pnpt1 (ENSMUSG00000020464) #8 Efemp1 (ENSMUSG00000020467) #10 Ccdc85a (ENSMUSG00000032878) #12 Vrk2 (ENSMUSG00000064090) #15 Fancl (ENSMUSG00000004018) #17 5730522E02Rik (ENSMUSG00000032985) Bcl11a (ENSMUSG00000000861) #19 A830031A19Rik (ENSMUSG00000055010) Papolg (ENSMUSG00000020273) #20 Rel (ENSMUSG00000020275) #22 Pus10 (ENSMUSG00000020280) #24 Pex13 (ENSMUSG00000020283) #26 Sanbr (ENSMUSG00000042208) #27 1700093K21Rik (ENSMUSG00000020286) #28 Ahsa2 (ENSMUSG00000020288) #29 Usp34 (ENSMUSG00000056342) #30 Xpo1 (ENSMUSG00000020290) #31 Fam161a (ENSMUSG00000049811) #35 Cct4 (ENSMUSG00000007739) #36 Commd1 (ENSMUSG00000051355) #37 Commd1b (ENSMUSG00000098650) B3gnt2 (ENSMUSG00000051650) Tmem17 (ENSMUSG00000049904) Ehbp1 (ENSMUSG00000042302) Otx1 (ENSMUSG00000005917) Ryukyu mouse MODERN SPECIES 2 Mtif2 (MGP_CAROLIEiJ_G0016158) Prorsd1 (MGP_CAROLIEiJ_G0016157) Ccdc88a (MGP_CAROLIEiJ_G0016156) Cfap36 (MGP_CAROLIEiJ_G0016155) Ppp4r3b (MGP_CAROLIEiJ_G0016154) #7 Pnpt1 (MGP_CAROLIEiJ_G0016153) #8 Efemp1 (MGP_CAROLIEiJ_G0016152) #10 Ccdc85a (MGP_CAROLIEiJ_G0016151) #12 MGP_CAROLIEiJ_G0016150 Vrk2 (MGP_CAROLIEiJ_G0016149) #15 Fancl (MGP_CAROLIEiJ_G0016148) #17 5730522E02Rik (MGP_CAROLIEiJ_G0016147) Bcl11a (MGP_CAROLIEiJ_G0016146) #19 MGP_CAROLIEiJ_G0016145 Papolg (MGP_CAROLIEiJ_G0016144) #20 Rel (MGP_CAROLIEiJ_G0016143) #22 Pus10 (MGP_CAROLIEiJ_G0016142) #24 Pex13 (MGP_CAROLIEiJ_G0016141) #26 Sanbr (MGP_CAROLIEiJ_G0016140) #27 1700093K21Rik (MGP_CAROLIEiJ_G0016139) #28 Ahsa2 (MGP_CAROLIEiJ_G0016138) #29 Usp34 (MGP_CAROLIEiJ_G0016137) #30 Xpo1 (MGP_CAROLIEiJ_G0016136) #31 MGP_CAROLIEiJ_G0016135 #35 Cct4 (MGP_CAROLIEiJ_G0016134) #36 MGP_CAROLIEiJ_G0016133 MGP_CAROLIEiJ_G0016132 #37 B3gnt2 (MGP_CAROLIEiJ_G0016131) MGP_CAROLIEiJ_G0016130 #37 MGP_CAROLIEiJ_G0016129 Tmem17 (MGP_CAROLIEiJ_G0016128) Shrew mouse MODERN SPECIES 4 Mtif2 (MGP_PahariEiJ_G0016732) Prorsd1 (MGP_PahariEiJ_G0016733) Ccdc88a (MGP_PahariEiJ_G0016734) Cfap36 (MGP_PahariEiJ_G0016735) Ppp4r3b (MGP_PahariEiJ_G0016736) #7 Pnpt1 (MGP_PahariEiJ_G0016737) #8 Efemp1 (MGP_PahariEiJ_G0016738) #10 Ccdc85a (MGP_PahariEiJ_G0016739) #12 Vrk2 (MGP_PahariEiJ_G0016740) #15 MGP_PahariEiJ_G0016741 Fancl (MGP_PahariEiJ_G0016742) #17 5730522E02Rik (MGP_PahariEiJ_G0016743) Bcl11a (MGP_PahariEiJ_G0016744) #19 MGP_PahariEiJ_G0016745 Papolg (MGP_PahariEiJ_G0016746) #20 Rel (MGP_PahariEiJ_G0016747) #22 Pus10 (MGP_PahariEiJ_G0016748) #24 Pex13 (MGP_PahariEiJ_G0016749) #26 Sanbr (MGP_PahariEiJ_G0016750) #27 1700093K21Rik (MGP_PahariEiJ_G0016751) #28 Ahsa2 (MGP_PahariEiJ_G0016752) #29 MGP_PahariEiJ_G0016753 #30 Xpo1 (MGP_PahariEiJ_G0016754) #31 MGP_PahariEiJ_G0016755 #35 Cct4 (MGP_PahariEiJ_G0016756) #36 Commd1 (MGP_PahariEiJ_G0016757) #37 MGP_PahariEiJ_G0016758 #37 MGP_PahariEiJ_G0016759 B3gnt2 (MGP_PahariEiJ_G0016760) MGP_PahariEiJ_G0016761 Tmem17 (MGP_PahariEiJ_G0016762) Rat MODERN SPECIES 5 Prorsd1 (ENSRNOG00000004145) Ccdc88a (ENSRNOG00000004057) Cfap36 (ENSRNOG00000003901) Ppp4r3b (ENSRNOG00000003712) #7 Pnpt1 (ENSRNOG00000003600) #8 Efemp1 (ENSRNOG00000003553) #10 Ccdc85a (ENSRNOG00000003374) #12 ENSRNOG00000064097 ENSRNOG00000065699 Vrk2 (ENSRNOG00000007864) #15 Fancl (ENSRNOG00000027249) #17 Bcl11a (ENSRNOG00000007049) #19 ENSRNOG00000066359 AABR07016640.3 (ENSRNOG00000058991) Papolg (ENSRNOG00000006261) #20 Rel (ENSRNOG00000054437) #22 Pus10 (ENSRNOG00000054151) #24 Pex13 (ENSRNOG00000054896) #26 ENSRNOG00000062465 Sanbr (ENSRNOG00000054669) #27 C14h2orf74 (ENSRNOG00000051590) #28 Ahsa2 (ENSRNOG00000052142) #29 LOC108352814 (ENSRNOG00000071093) Usp34 (ENSRNOG00000051889) #30 Xpo1 (ENSRNOG00000009935) #31 Fam161a (ENSRNOG00000009881) #35 Cct4 (ENSRNOG00000009642) #36 Zrsr2-ps1 (ENSRNOG00000009639) Commd1 (ENSRNOG00000009281) #37 B3gnt2 (ENSRNOG00000009267) LOC100361636 (ENSRNOG00000033346) Upper Galilee mountains blind mole rat MODERN SPECIES 1270 Papolg (ENSNGAG00000001120) #20 Rel (ENSNGAG00000005092) #22 Pus10 (ENSNGAG00000009489) #24 Pex13 (ENSNGAG00000012683) #26 ENSNGAG00000015574 #27 1700093K21Rik (ENSNGAG00000023598) #28 Ahsa2 (ENSNGAG00000008076) #29 Usp34 (ENSNGAG00000023618) #30 Xpo1 (ENSNGAG00000022158) #31 ENSNGAG00000002122 #35 Cct4 (ENSNGAG00000023486) #36 Commd1 (ENSNGAG00000019828) #37 ENSNGAG00000011974 B3gnt2 (ENSNGAG00000022382) ENSNGAG00000018903 Lesser Egyptian jerboa MODERN SPECIES 121 ENSJJAG00000020525 Bcl11a (ENSJJAG00000018059) #19 Papolg (ENSJJAG00000015601) #20 ENSJJAG00000012411 Rel (ENSJJAG00000015584) #22 Pus10 (ENSJJAG00000006862) #24 Pex13 (ENSJJAG00000019503) #26 Sanbr (ENSJJAG00000023772) #27 1700093K21Rik (ENSJJAG00000019388) #28 Ahsa2 (ENSJJAG00000014319) #29 Usp34 (ENSJJAG00000012692) #30 Xpo1 (ENSJJAG00000020468) #31 ENSJJAG00000017279 ENSJJAG00000016945 ENSJJAG00000019143 #35 Robo2 (ENSJJAG00000023715) Robo1 (ENSJJAG00000022393) ENSJJAG00000018079 Gbe1 (ENSJJAG00000014497) ENSJJAG00000000126 Kangaroo rat MODERN SPECIES 382 Bcl11a (ENSDORG00000010064) #19 Papolg (ENSDORG00000016228) #20 ENSDORG00000030049 Rel (ENSDORG00000011388) #22 Pus10 (ENSDORG00000005550) #24 Pex13 (ENSDORG00000009725) #26 ENSDORG00000011221 #27 ENSDORG00000011227 #28 Ahsa2 (ENSDORG00000012061) #29 Usp34 (ENSDORG00000012062) #30 Xpo1 (ENSDORG00000013050) #31 ENSDORG00000026102 #35 Cct4 (ENSDORG00000002542) #36 Commd1 (ENSDORG00000001166) #37 ENSDORG00000027292 B3gnt2 (ENSDORG00000024683) Tmem17 (ENSDORG00000024954) Ehbp1 (ENSDORG00000002628) ENSDORG00000023858 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178.g #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a Long-tailed chinchilla MODERN SPECIES 131 ENSCLAG00000011209 CLHC1 (ENSCLAG00000012126) ENSCLAG00000008521 MTIF2 (ENSCLAG00000007900) ENSCLAG00000007625 CCDC88A (ENSCLAG00000010133) CFAP36 (ENSCLAG00000016701) ENSCLAG00000007551 #7 PNPT1 (ENSCLAG00000006240) #8 EFEMP1 (ENSCLAG00000015816) #10 CCDC85A (ENSCLAG00000015417) #12 VRK2 (ENSCLAG00000016561) #15 FANCL (ENSCLAG00000011359) #17 BCL11A (ENSCLAG00000009184) #19 PAPOLG (ENSCLAG00000008603) #20 REL (ENSCLAG00000007490) #22 PUS10 (ENSCLAG00000011001) #24 PEX13 (ENSCLAG00000015482) #26 SANBR (ENSCLAG00000009068) #27 ENSCLAG00000007857 #29 USP34 (ENSCLAG00000010299) #30 XPO1 (ENSCLAG00000012953) #31 FAM161A (ENSCLAG00000011652) #35 CCT4 (ENSCLAG00000014321) #36 COMMD1 (ENSCLAG00000013262) #37 B3GNT2 (ENSCLAG00000013147) TMEM17 (ENSCLAG00000013487) EHBP1 (ENSCLAG00000007561) OTX1 (ENSCLAG00000010265) ENSCLAG00000008400 MDH1 (ENSCLAG00000007815) Degu MODERN SPECIES 119 ENSODEG00000013497 VRK2 (ENSODEG00000013065) #15 ENSODEG00000013163 #17 ENSODEG00000020019 ENSODEG00000012035 BCL11A (ENSODEG00000011913) #19 ENSODEG00000012174 PAPOLG (ENSODEG00000012424) #20 REL (ENSODEG00000013430) #22 PUS10 (ENSODEG00000011720) #24 ENSODEG00000012067 #27 ENSODEG00000011830 #29 USP34 (ENSODEG00000011790) #30 ENSODEG00000020015 XPO1 (ENSODEG00000012632) #31 ENSODEG00000011466 ENSODEG00000011239 ENSODEG00000012087 ENSODEG00000012263 ENSODEG00000011618 #36 ENSODEG00000011341 B3GNT2 (ENSODEG00000011165) ENSODEG00000011529 EHBP1 (ENSODEG00000012259) Guinea pig MODERN SPECIES 48 ENSCPOG00000008064 RPS27A (ENSCPOG00000005819) MTIF2 (ENSCPOG00000005823) ENSCPOG00000004666 CCDC88A (ENSCPOG00000004824) CFAP36 (ENSCPOG00000010993) PPP4R3B (ENSCPOG00000010998) #7 PNPT1 (ENSCPOG00000011008) #8 EFEMP1 (ENSCPOG00000002568) #10 CCDC85A (ENSCPOG00000001873) #12 VRK2 (ENSCPOG00000015550) #15 FANCL (ENSCPOG00000015552) #17 ENSCPOG00000032549 BCL11A (ENSCPOG00000007587) #19 PAPOLG (ENSCPOG00000010306) #20 REL (ENSCPOG00000011659) #22 PUS10 (ENSCPOG00000011670) #24 PEX13 (ENSCPOG00000034678) #26 SANBR (ENSCPOG00000004783) #27 ENSCPOG00000004791 #29 USP34 (ENSCPOG00000004796) #30 XPO1 (ENSCPOG00000034053) #31 FAM161A (ENSCPOG00000002085) #35 CCT4 (ENSCPOG00000002086) #36 COMMD1 (ENSCPOG00000002088) #37 B3GNT2 (ENSCPOG00000034379) TMEM17 (ENSCPOG00000035038) EHBP1 (ENSCPOG00000002001) OTX1 (ENSCPOG00000004881) ENSCPOG00000030520 ENSCPOG00000036317 Naked mole-rat female MODERN SPECIES 23 CCDC88A (ENSHGLG00000008470) ENSHGLG00000044471 ENSHGLG00000008137 ENSHGLG00000007808 #7 ENSHGLG00000007480 #8 EFEMP1 (ENSHGLG00000007156) #10 CCDC85A (ENSHGLG00000006824) #12 ENSHGLG00000040361 ENSHGLG00000044514 VRK2 (ENSHGLG00000006691) #15 FANCL (ENSHGLG00000006628) #17 BCL11A (ENSHGLG00000019600) #19 ENSHGLG00000040216 ENSHGLG00000036544 PAPOLG (ENSHGLG00000019610) #20 REL (ENSHGLG00000019601) #22 PUS10 (ENSHGLG00000019599) #24 PEX13 (ENSHGLG00000042744) #26 ENSHGLG00000046720 ENSHGLG00000047849 ENSHGLG00000046080 SANBR (ENSHGLG00000013196) #27 ENSHGLG00000019155 #28 ENSHGLG00000019027 #29 USP34 (ENSHGLG00000003393) #30 ENSHGLG00000019983 XPO1 (ENSHGLG00000003115) #31 FAM161A (ENSHGLG00000003066) #35 ENSHGLG00000033740 ENSHGLG00000002885 #36 ENSHGLG00000046505 Sciuridae ANCESTRAL SPECIES 16 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Marmotini ANCESTRAL SPECIES 14 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00950000183120.e.b.a.a.b.a.a.b ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Marmotini_b ANCESTRAL SPECIES 44 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00950000183120.e.b.a.a.b.a.a.b ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000154451.s ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029.m #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Arctic ground squirrel MODERN SPECIES 47 PAPOLG (ENSUPAG00010011631) #20 REL (ENSUPAG00010011621) #22 PUS10 (ENSUPAG00010011569) #24 PEX13 (ENSUPAG00010011557) #26 SANBR (ENSUPAG00010011475) #27 C2orf74 (ENSUPAG00010011464) #28 ENSUPAG00010011445 #29 USP34 (ENSUPAG00010011360) #30 XPO1 (ENSUPAG00010011307) #31 ENSUPAG00010011301 FAM161A (ENSUPAG00010011296) #35 CCT4 (ENSUPAG00010011275) #36 ENSUPAG00010011263 #37 B3GNT2 (ENSUPAG00010011255) TMEM17 (ENSUPAG00010011243) EHBP1 (ENSUPAG00010011097) OTX1 (ENSUPAG00010011094) Squirrel MODERN SPECIES 91 CLHC1 (ENSSTOG00000008134) RPS27A (ENSSTOG00000009566) MTIF2 (ENSSTOG00000028059) ENSSTOG00000005439 CCDC88A (ENSSTOG00000026277) CFAP36 (ENSSTOG00000006243) PPP4R3B (ENSSTOG00000006276) #7 PNPT1 (ENSSTOG00000006304) #8 EFEMP1 (ENSSTOG00000025148) #10 CCDC85A (ENSSTOG00000026098) #12 ENSSTOG00000026635 VRK2 (ENSSTOG00000012525) #15 FANCL (ENSSTOG00000012532) #17 BCL11A (ENSSTOG00000004523) #19 PAPOLG (ENSSTOG00000010861) #20 REL (ENSSTOG00000005785) #22 PUS10 (ENSSTOG00000005814) #24 PEX13 (ENSSTOG00000005864) #26 SANBR (ENSSTOG00000005893) #27 ENSSTOG00000029668 C2orf74 (ENSSTOG00000026908) #28 ENSSTOG00000007718 #29 USP34 (ENSSTOG00000007744) #30 ENSSTOG00000020670 XPO1 (ENSSTOG00000016122) #31 ENSSTOG00000028618 FAM161A (ENSSTOG00000026146) #35 CCT4 (ENSSTOG00000014911) #36 COMMD1 (ENSSTOG00000015062) #37 B3GNT2 (ENSSTOG00000015068) TMEM17 (ENSSTOG00000009462) Alpin marmot MODERN SPECIES 6 MTIF2 (ENSMMMG00000007495) ENSMMMG00000007487 CCDC88A (ENSMMMG00000007415) CFAP36 (ENSMMMG00000007393) PPP4R3B (ENSMMMG00000007370) #7 PNPT1 (ENSMMMG00000007328) #8 EFEMP1 (ENSMMMG00000007318) #10 CCDC85A (ENSMMMG00000007290) #12 ENSMMMG00000007281 VRK2 (ENSMMMG00000007213) #15 FANCL (ENSMMMG00000007162) #17 ENSMMMG00000007141 BCL11A (ENSMMMG00000007103) #19 ENSMMMG00000007079 PAPOLG (ENSMMMG00000007034) #20 REL (ENSMMMG00000007001) #22 ENSMMMG00000006930 #24 PEX13 (ENSMMMG00000006925) #26 SANBR (ENSMMMG00000006843) #27 ENSMMMG00000006840 C2orf74 (ENSMMMG00000006827) #28 ENSMMMG00000006820 #29 USP34 (ENSMMMG00000006722) #30 XPO1 (ENSMMMG00000006603) #31 ENSMMMG00000006598 ENSMMMG00000006583 #35 CCT4 (ENSMMMG00000006543) #36 ENSMMMG00000006529 #37 B3GNT2 (ENSMMMG00000006495) TMEM17 (ENSMMMG00000006473) EHBP1 (ENSMMMG00000006363) Eurasian red squirrel MODERN SPECIES 5 CCDC88A (ENSSVLG00005016169) CFAP36 (ENSSVLG00005016034) PPP4R3B (ENSSVLG00005015983) #7 PNPT1 (ENSSVLG00005024743) #8 EFEMP1 (ENSSVLG00005024710) #10 CCDC85A (ENSSVLG00005024681) #12 ENSSVLG00005024663 ENSSVLG00005024641 ENSSVLG00005024611 ENSSVLG00005024500 #15 FANCL (ENSSVLG00005024291) #17 ENSSVLG00005024225 BCL11A (ENSSVLG00005024161) #19 ENSSVLG00005024132 PAPOLG (ENSSVLG00005024109) #20 REL (ENSSVLG00005024054) #22 PUS10 (ENSSVLG00005024033) #24 PEX13 (ENSSVLG00005023987) #26 SANBR (ENSSVLG00005023769) #27 ENSSVLG00005023730 C2orf74 (ENSSVLG00005023693) #28 ENSSVLG00005023655 #29 ENSSVLG00005023624 ENSSVLG00005023593 #29 USP34 (ENSSVLG00005023531) #30 XPO1 (ENSSVLG00005023207) #31 ENSSVLG00005023491 #31 ENSSVLG00005023117 ENSSVLG00005023092 FAM161A (ENSSVLG00005023008) #35 CCT4 (ENSSVLG00005022942) #36 Lagomorpha ANCESTRAL SPECIES 10 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b.m ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824.c #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Rabbit MODERN SPECIES 11 ENSOCUG00000003609 MTIF2 (ENSOCUG00000003617) ENSOCUG00000011673 CCDC88A (ENSOCUG00000003620) CFAP36 (ENSOCUG00000006874) PPP4R3B (ENSOCUG00000006880) #7 PNPT1 (ENSOCUG00000006889) #8 EFEMP1 (ENSOCUG00000014657) #10 ENSOCUG00000038290 CCDC85A (ENSOCUG00000003491) #12 ENSOCUG00000029918 VRK2 (ENSOCUG00000007388) #15 FANCL (ENSOCUG00000005105) #17 BCL11A (ENSOCUG00000023948) #19 PAPOLG (ENSOCUG00000004962) #20 REL (ENSOCUG00000004968) #22 PUS10 (ENSOCUG00000007867) #24 PEX13 (ENSOCUG00000007894) #26 SANBR (ENSOCUG00000009559) #27 C2orf74 (ENSOCUG00000029395) #28 ENSOCUG00000017817 #29 USP34 (ENSOCUG00000017819) #30 XPO1 (ENSOCUG00000004986) #31 ENSOCUG00000000707 #35 CCT4 (ENSOCUG00000024386) #36 COMMD1 (ENSOCUG00000001093) #37 B3GNT2 (ENSOCUG00000017281) TMEM17 (ENSOCUG00000010487) ENSOCUG00000037865 EHBP1 (ENSOCUG00000013563) OTX1 (ENSOCUG00000021773) Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000158732 #22 Common shrew MODERN SPECIES 4270 REL (ENSSARG00000011809) #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Carnivora ANCESTRAL SPECIES 19 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Felidae ANCESTRAL SPECIES 3 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00390000015489.q.b.a ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000166485.b ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Panthera ANCESTRAL SPECIES 2 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00390000015489.q.b.a ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000166485.b ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Panthera_a ANCESTRAL SPECIES 1 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00390000015489.q.b.a ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000166485.b ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 leopard MODERN SPECIES RPS27A (ENSPPRG00000005461) MTIF2 (ENSPPRG00000004891) ENSPPRG00000004762 CCDC88A (ENSPPRG00000004530) CFAP36 (ENSPPRG00000001887) PPP4R3B (ENSPPRG00000001791) #7 PNPT1 (ENSPPRG00000001366) #8 EFEMP1 (ENSPPRG00000001293) #10 CCDC85A (ENSPPRG00000000770) #12 ENSPPRG00000000204 ENSPPRG00000000057 VRK2 (ENSPPRG00000022648) #15 FANCL (ENSPPRG00000022729) #17 BCL11A (ENSPPRG00000023125) #19 PAPOLG (ENSPPRG00000023250) #20 REL (ENSPPRG00000023390) #22 PUS10 (ENSPPRG00000023600) #24 PEX13 (ENSPPRG00000023891) #26 SANBR (ENSPPRG00000023999) #27 C2orf74 (ENSPPRG00000024210) #28 ENSPPRG00000024227 #29 ENSPPRG00000024371 #29 USP34 (ENSPPRG00000024570) #30 XPO1 (ENSPPRG00000024625) #31 ENSPPRG00000024662 FAM161A (ENSPPRG00000024716) #35 CCT4 (ENSPPRG00000024738) #36 COMMD1 (ENSPPRG00000024784) #37 B3GNT2 (ENSPPRG00000020752) ENSPPRG00000024813 TMEM17 (ENSPPRG00000024820) lion MODERN SPECIES 3 MTIF2 (ENSPLOG00000001898) ENSPLOG00000001882 CCDC88A (ENSPLOG00000001817) CFAP36 (ENSPLOG00000001719) PPP4R3B (ENSPLOG00000001621) #7 ENSPLOG00000001566 #8 ENSPLOG00000001555 EFEMP1 (ENSPLOG00000001526) #10 CCDC85A (ENSPLOG00000001494) #12 ENSPLOG00000001483 VRK2 (ENSPLOG00000001439) #15 FANCL (ENSPLOG00000001377) #17 BCL11A (ENSPLOG00000001289) #19 PAPOLG (ENSPLOG00000001210) #20 ENSPLOG00000001190 REL (ENSPLOG00000001176) #22 PUS10 (ENSPLOG00000001124) #24 PEX13 (ENSPLOG00000001084) #26 SANBR (ENSPLOG00000001051) #27 C2orf74 (ENSPLOG00000001023) #28 ENSPLOG00000001011 #29 USP34 (ENSPLOG00000000913) #30 XPO1 (ENSPLOG00000000831) #31 ENSPLOG00000000810 ENSPLOG00000000799 #35 ENSPLOG00000000788 CCT4 (ENSPLOG00000000744) #36 ENSPLOG00000000693 COMMD1 (ENSPLOG00000000685) #37 B3GNT2 (ENSPLOG00000000672) TMEM17 (ENSPLOG00000000647) Tiger MODERN SPECIES 56 CLHC1 (ENSPTIG00000021504) ENSPTIG00000020838 MTIF2 (ENSPTIG00000020552) ENSPTIG00000020516 CCDC88A (ENSPTIG00000019432) CFAP36 (ENSPTIG00000017775) PPP4R3B (ENSPTIG00000016263) #7 PNPT1 (ENSPTIG00000014915) #8 EFEMP1 (ENSPTIG00000011247) #10 CCDC85A (ENSPTIG00000010582) #12 ENSPTIG00000009970 VRK2 (ENSPTIG00000008828) #15 FANCL (ENSPTIG00000020057) #17 BCL11A (ENSPTIG00000018807) #19 PAPOLG (ENSPTIG00000018126) #20 REL (ENSPTIG00000016976) #22 PUS10 (ENSPTIG00000015705) #24 PEX13 (ENSPTIG00000015161) #26 SANBR (ENSPTIG00000011564) #27 C2orf74 (ENSPTIG00000011235) #28 ENSPTIG00000010228 #29 ENSPTIG00000008945 #29 USP34 (ENSPTIG00000016516) #30 XPO1 (ENSPTIG00000012259) #31 FAM161A (ENSPTIG00000011182) #35 CCT4 (ENSPTIG00000009450) #36 COMMD1 (ENSPTIG00000008560) #37 B3GNT2 (ENSPTIG00000006426) TMEM17 (ENSPTIG00000007396) EHBP1 (ENSPTIG00000005411) OTX1 (ENSPTIG00000021186) Cat MODERN SPECIES 2 CLHC1 (ENSFCAG00000024453) RPS27A (ENSFCAG00000023939) MTIF2 (ENSFCAG00000013626) ENSFCAG00000004444 CCDC88A (ENSFCAG00000023941) CFAP36 (ENSFCAG00000003522) PPP4R3B (ENSFCAG00000026457) #7 PNPT1 (ENSFCAG00000013236) #8 EFEMP1 (ENSFCAG00000000792) #10 CCDC85A (ENSFCAG00000000794) #12 VRK2 (ENSFCAG00000022979) #15 FANCL (ENSFCAG00000031618) #17 BCL11A (ENSFCAG00000027154) #19 PAPOLG (ENSFCAG00000026126) #20 ENSFCAG00000045350 REL (ENSFCAG00000008018) #22 PUS10 (ENSFCAG00000008019) #24 ENSFCAG00000028969 #26 SANBR (ENSFCAG00000014456) #27 CA3H2orf74 (ENSFCAG00000019120) #28 ENSFCAG00000009473 #29 USP34 (ENSFCAG00000009478) #30 XPO1 (ENSFCAG00000002702) #31 ENSFCAG00000049089 FAM161A (ENSFCAG00000011118) #35 CCT4 (ENSFCAG00000024322) #36 COMMD1 (ENSFCAG00000027737) #37 B3GNT2 (ENSFCAG00000009061) TMEM17 (ENSFCAG00000046240) EHBP1 (ENSFCAG00000026831) OTX1 (ENSFCAG00000044742) Caniformia ANCESTRAL SPECIES 18 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Canidae ANCESTRAL SPECIES 10 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00940000154546 Dingo MODERN SPECIES 307 MTIF2 (ENSCAFG00020026538) ENSCAFG00020026539 CCDC88A (ENSCAFG00020026610) CFAP36 (ENSCAFG00020026823) PPP4R3B (ENSCAFG00020026838) #7 PNPT1 (ENSCAFG00020026841) #8 EFEMP1 (ENSCAFG00020026842) #10 CCDC85A (ENSCAFG00020026847) #12 ENSCAFG00020026848 ENSCAFG00020026849 VRK2 (ENSCAFG00020026850) #15 FANCL (ENSCAFG00020026851) #17 BCL11A (ENSCAFG00020026853) #19 ENSCAFG00020026854 PAPOLG (ENSCAFG00020026859) #20 REL (ENSCAFG00020026871) #22 ENSCAFG00020026873 #24 ENSCAFG00020026876 PEX13 (ENSCAFG00020026877) #26 SANBR (ENSCAFG00020026879) #27 C2orf74 (ENSCAFG00020026882) #28 USP34 (ENSCAFG00020026887) #30 ENSCAFG00020026910 #31 ENSCAFG00020026913 #31 FAM161A (ENSCAFG00020026916) #35 ENSCAFG00020026918 #36 COMMD1 (ENSCAFG00020026920) #37 B3GNT2 (ENSCAFG00020026921) TMEM17 (ENSCAFG00020026923) EHBP1 (ENSCAFG00020026924) OTX1 (ENSCAFG00020026926) Dog MODERN SPECIES 1 RPS27A (ENSCAFG00845010792) MTIF2 (ENSCAFG00845010861) ENSCAFG00845011085 CCDC88A (ENSCAFG00845011215) CFAP36 (ENSCAFG00845011709) PPP4R3B (ENSCAFG00845011789) #7 PNPT1 (ENSCAFG00845011925) #8 EFEMP1 (ENSCAFG00845012060) #10 CCDC85A (ENSCAFG00845012276) #12 ENSCAFG00845012446 VRK2 (ENSCAFG00845012500) #15 FANCL (ENSCAFG00845012667) #17 BCL11A (ENSCAFG00845012955) #19 ENSCAFG00845013045 PAPOLG (ENSCAFG00845013090) #20 REL (ENSCAFG00845013250) #22 PUS10 (ENSCAFG00845013311) #24 PEX13 (ENSCAFG00845013355) #26 SANBR (ENSCAFG00845013376) #27 C2orf74 (ENSCAFG00845013418) #28 USP34 (ENSCAFG00845013490) #30 XPO1 (ENSCAFG00845016081) #31 FAM161A (ENSCAFG00845016188) #35 CCT4 (ENSCAFG00845016454) #36 COMMD1 (ENSCAFG00845016604) #37 B3GNT2 (ENSCAFG00845016685) TMEM17 (ENSCAFG00845016745) EHBP1 (ENSCAFG00845017216) OTX1 (ENSCAFG00845018084) WDPCP (ENSCAFG00845018266) ENSCAFG00845018841 Red fox MODERN SPECIES 10 MTIF2 (ENSVVUG00000009923) ENSVVUG00000009931 CCDC88A (ENSVVUG00000009946) CFAP36 (ENSVVUG00000010025) PPP4R3B (ENSVVUG00000010031) #7 PNPT1 (ENSVVUG00000010034) #8 EFEMP1 (ENSVVUG00000010060) #10 CCDC85A (ENSVVUG00000010112) #12 ENSVVUG00000010147 ENSVVUG00000010149 VRK2 (ENSVVUG00000010175) #15 FANCL (ENSVVUG00000010209) #17 BCL11A (ENSVVUG00000010330) #19 ENSVVUG00000010337 PAPOLG (ENSVVUG00000010344) #20 REL (ENSVVUG00000010372) #22 PUS10 (ENSVVUG00000010405) #24 PEX13 (ENSVVUG00000010422) #26 SANBR (ENSVVUG00000010434) #27 C2orf74 (ENSVVUG00000010534) #28 USP34 (ENSVVUG00000010616) #30 XPO1 (ENSVVUG00000012009) #31 FAM161A (ENSVVUG00000012026) #35 CCT4 (ENSVVUG00000012040) #36 COMMD1 (ENSVVUG00000012078) #37 B3GNT2 (ENSVVUG00000012079) TMEM17 (ENSVVUG00000012092) EHBP1 (ENSVVUG00000012144) OTX1 (ENSVVUG00000012226) ENSVVUG00000012230 ENSVVUG00000012232 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Mustelinae ANCESTRAL SPECIES 16 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a Ferret MODERN SPECIES 169 ENSMPUG00000005043 VRK2 (ENSMPUG00000005056) #15 FANCL (ENSMPUG00000005063) #17 ENSMPUG00000018814 ENSMPUG00000005122 ENSMPUG00000005129 ENSMPUG00000005140 ENSMPUG00000005161 #19 PAPOLG (ENSMPUG00000005165) #20 REL (ENSMPUG00000005180) #22 PUS10 (ENSMPUG00000005185) #24 ENSMPUG00000005228 #26 SANBR (ENSMPUG00000005235) #27 ENSMPUG00000005244 #28 USP34 (ENSMPUG00000005248) #30 XPO1 (ENSMPUG00000005560) #31 FAM161A (ENSMPUG00000005585) #35 CCT4 (ENSMPUG00000005615) #36 COMMD1 (ENSMPUG00000005842) #37 B3GNT2 (ENSMPUG00000018818) ENSMPUG00000005847 TMEM17 (ENSMPUG00000005851) ENSMPUG00000005871 EHBP1 (ENSMPUG00000005877) OTX1 (ENSMPUG00000005901) American mink MODERN SPECIES 109 VRK2 (ENSNVIG00000012761) #15 ENSNVIG00000012747 FANCL (ENSNVIG00000012633) #17 BCL11A (ENSNVIG00000012490) #19 PAPOLG (ENSNVIG00000012455) #20 REL (ENSNVIG00000012402) #22 PUS10 (ENSNVIG00000012384) #24 PEX13 (ENSNVIG00000012376) #26 K1841 (ENSNVIG00000012252) #27 C2orf74 (ENSNVIG00000012228) #28 ENSNVIG00000012222 ENSNVIG00000012217 USP34 (ENSNVIG00000012085) #30 XPO1 (ENSNVIG00000011993) #31 F161A (ENSNVIG00000011983) #35 CCT4 (ENSNVIG00000011941) #36 COMMD1 (ENSNVIG00000011903) #37 ENSNVIG00000011888 TMEM17 (ENSNVIG00000011866) EHBP1 (ENSNVIG00000011813) OTX1 (ENSNVIG00000011785) Ursidae ANCESTRAL SPECIES 9 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Giant Panda MODERN SPECIES 14 ENSAMEG00000004017 MTIF2 (ENSAMEG00000003983) ENSAMEG00000030167 ENSAMEG00000003982 CCDC88A (ENSAMEG00000003927) ENSAMEG00000029692 CFAP36 (ENSAMEG00000003905) PPP4R3B (ENSAMEG00000003843) #7 PNPT1 (ENSAMEG00000003772) #8 EFEMP1 (ENSAMEG00000003695) #10 CCDC85A (ENSAMEG00000003685) #12 VRK2 (ENSAMEG00000015844) #15 FANCL (ENSAMEG00000015826) #17 BCL11A (ENSAMEG00000015813) #19 PAPOLG (ENSAMEG00000018227) #20 REL (ENSAMEG00000018236) #22 PUS10 (ENSAMEG00000018240) #24 PEX13 (ENSAMEG00000018243) #26 SANBR (ENSAMEG00000018245) #27 C2orf74 (ENSAMEG00000018247) #28 ENSAMEG00000018248 #29 USP34 (ENSAMEG00000018249) #30 XPO1 (ENSAMEG00000003460) #31 FAM161A (ENSAMEG00000003523) #35 CCT4 (ENSAMEG00000003530) #36 COMMD1 (ENSAMEG00000008249) #37 B3GNT2 (ENSAMEG00000005508) TMEM17 (ENSAMEG00000005503) EHBP1 (ENSAMEG00000005488) OTX1 (ENSAMEG00000026277) WDPCP (ENSAMEG00000005449) Ursus ANCESTRAL SPECIES 20 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00990000206080 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 Polar bear MODERN SPECIES 223 ENSUMAG00000016807 MTIF2 (ENSUMAG00000016809) ENSUMAG00000016811 CCDC88A (ENSUMAG00000017062) ENSUMAG00000018821 CFAP36 (ENSUMAG00000018828) PPP4R3B (ENSUMAG00000018833) #7 PNPT1 (ENSUMAG00000018844) #8 EFEMP1 (ENSUMAG00000018866) #10 ENSUMAG00000018900 #12 ENSUMAG00000018915 VRK2 (ENSUMAG00000018931) #15 FANCL (ENSUMAG00000018951) #17 BCL11A (ENSUMAG00000019056) #19 PAPOLG (ENSUMAG00000019081) #20 REL (ENSUMAG00000019086) #22 PUS10 (ENSUMAG00000019094) #24 ENSUMAG00000019099 PEX13 (ENSUMAG00000019100) #26 SANBR (ENSUMAG00000019109) #27 C2orf74 (ENSUMAG00000019220) #28 ENSUMAG00000019225 #29 ENSUMAG00000019230 #29 USP34 (ENSUMAG00000019333) #30 XPO1 (ENSUMAG00000019859) #31 ENSUMAG00000019866 FAM161A (ENSUMAG00000019872) #35 CCT4 (ENSUMAG00000019983) #36 COMMD1 (ENSUMAG00000020922) #37 B3GNT2 (ENSUMAG00000020928) TMEM17 (ENSUMAG00000020931) American black bear DUPLICATION American black bear MODERN SPECIES 3798 ENSUAMG00000009719 #22 ENSUAMG00000009721 ENSUAMG00000009722 #24 ENSUAMG00000009724 ENSUAMG00000009727 PEX13 (ENSUAMG00000009728) #26 American black bear MODERN SPECIES 2830 ENSUAMG00000011122 #22 Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Chiroptera ANCESTRAL SPECIES 10 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00950000185458 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Greater horseshoe bat MODERN SPECIES 4 ENSRFEG00010012185 MTIF2 (ENSRFEG00010012133) ENSRFEG00010012102 CCDC88A (ENSRFEG00010011717) CFAP36 (ENSRFEG00010011559) PPP4R3B (ENSRFEG00010011020) #7 ENSRFEG00010010932 PNPT1 (ENSRFEG00010010875) #8 EFEMP1 (ENSRFEG00010010797) #10 CCDC85A (ENSRFEG00010010546) #12 VRK2 (ENSRFEG00010010407) #15 FANCL (ENSRFEG00010010286) #17 BCL11A (ENSRFEG00010010081) #19 ENSRFEG00010010050 PAPOLG (ENSRFEG00010009986) #20 REL (ENSRFEG00010009957) #22 PUS10 (ENSRFEG00010009923) #24 PEX13 (ENSRFEG00010009877) #26 SANBR (ENSRFEG00010009789) #27 C2orf74 (ENSRFEG00010009703) #28 ENSRFEG00010009602 #29 USP34 (ENSRFEG00010009538) #30 XPO1 (ENSRFEG00010009458) #31 FAM161A (ENSRFEG00010009411) #35 ENSRFEG00010009347 #36 COMMD1 (ENSRFEG00010009299) #37 B3GNT2 (ENSRFEG00010009289) ENSRFEG00010009258 ENSRFEG00010009225 ENSRFEG00010009180 TMEM17 (ENSRFEG00010009150) Microbat MODERN SPECIES 943 ENSMLUG00000029449 ENSMLUG00000017067 ENSMLUG00000025358 CCDC88A (ENSMLUG00000016070) CFAP36 (ENSMLUG00000003869) ENSMLUG00000003875 #7 PNPT1 (ENSMLUG00000003886) #8 EFEMP1 (ENSMLUG00000003898) #10 CCDC85A (ENSMLUG00000007767) #12 VRK2 (ENSMLUG00000002069) #15 FANCL (ENSMLUG00000002077) #17 BCL11A (ENSMLUG00000010117) #19 ENSMLUG00000030390 ENSMLUG00000014903 PAPOLG (ENSMLUG00000009853) #20 REL (ENSMLUG00000007454) #22 PUS10 (ENSMLUG00000000082) #24 PEX13 (ENSMLUG00000025131) #26 SANBR (ENSMLUG00000007627) #27 C2orf74 (ENSMLUG00000027969) #28 ENSMLUG00000003408 #29 ENSMLUG00000027445 USP34 (ENSMLUG00000003414) #30 XPO1 (ENSMLUG00000010670) #31 FAM161A (ENSMLUG00000030514) #35 CCT4 (ENSMLUG00000016138) #36 ENSMLUG00000022697 #37 B3GNT2 (ENSMLUG00000009924) ENSMLUG00000027762 EHBP1 (ENSMLUG00000002314) OTX1 (ENSMLUG00000002330) Megabat MODERN SPECIES 1771 REL (ENSPVAG00000000364) #22 PUS10 (ENSPVAG00000000365) #24 PEX13 (ENSPVAG00000000366) #26 Equus ANCESTRAL SPECIES 7 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00800000125307 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT01090000263393 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Horse MODERN SPECIES 6 CLHC1 (ENSECAG00000022052) RPS27A (ENSECAG00000018773) ENSECAG00000008349 MTIF2 (ENSECAG00000009169) ENSECAG00000036639 CCDC88A (ENSECAG00000006877) CFAP36 (ENSECAG00000023883) PPP4R3B (ENSECAG00000013819) #7 PNPT1 (ENSECAG00000020058) #8 EFEMP1 (ENSECAG00000010447) #10 CCDC85A (ENSECAG00000009888) #12 VRK2 (ENSECAG00000021408) #15 FANCL (ENSECAG00000017007) #17 BCL11A (ENSECAG00000008094) #19 PAPOLG (ENSECAG00000009859) #20 REL (ENSECAG00000003277) #22 PUS10 (ENSECAG00000014076) #24 ENSECAG00000059857 PEX13 (ENSECAG00000019622) SANBR (ENSECAG00000019995) #27 C15H2orf74 (ENSECAG00000013166) #28 ENSECAG00000005107 #29 USP34 (ENSECAG00000022272) #30 ENSECAG00000059157 #13 ENSECAG00000044596 ENSECAG00000060044 ENSECAG00000059740 XPO1 (ENSECAG00000024920) #31 FAM161A (ENSECAG00000024614) #35 CCT4 (ENSECAG00000016982) #36 ENSECAG00000060047 Donkey MODERN SPECIES 26 ENSEASG00005038395 MTIF2 (ENSEASG00005000740) ENSEASG00005030649 CCDC88A (ENSEASG00005001139) ENSEASG00005001956 CFAP36 (ENSEASG00005001963) PPP4R3B (ENSEASG00005001969) #7 PNPT1 (ENSEASG00005001974) #8 EFEMP1 (ENSEASG00005001986) #10 CCDC85A (ENSEASG00005002008) #12 VRK2 (ENSEASG00005002016) #15 FANCL (ENSEASG00005002021) #17 BCL11A (ENSEASG00005028807) #19 ENSEASG00005033063 PAPOLG (ENSEASG00005002038) #20 REL (ENSEASG00005002043) #22 PUS10 (ENSEASG00005002058) #24 ENSEASG00005038092 SANBR (ENSEASG00005002083) #27 C2orf74 (ENSEASG00005002091) #28 ENSEASG00005002092 #29 USP34 (ENSEASG00005002220) #30 XPO1 (ENSEASG00005007223) #31 ENSEASG00005007225 FAM161A (ENSEASG00005007228) #35 CCT4 (ENSEASG00005007230) #36 COMMD1 (ENSEASG00005007231) #37 ENSEASG00005007233 ENSEASG00005007234 B3GNT2 (ENSEASG00005032411) TMEM17 (ENSEASG00005031233) Artiodactyla ANCESTRAL SPECIES 16 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Suina ANCESTRAL SPECIES 13 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT01030000234791 ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Pig MODERN SPECIES 11 CCDC88A (ENSSSCG00000008406) CFAP36 (ENSSSCG00000008400) PPP4R3B (ENSSSCG00000008398) #7 PNPT1 (ENSSSCG00000031882) #8 EFEMP1 (ENSSSCG00000008397) #10 CCDC85A (ENSSSCG00000008396) #12 ENSSSCG00000051591 ENSSSCG00000044774 ENSSSCG00000050174 ENSSSCG00000054360 ENSSSCG00000041087 VRK2 (ENSSSCG00000008395) #15 FANCL (ENSSSCG00000008394) #17 BCL11A (ENSSSCG00000008392) #19 PAPOLG (ENSSSCG00000008389) #20 REL (ENSSSCG00000008388) #22 PUS10 (ENSSSCG00000008385) #24 ENSSSCG00000062269 ENSSSCG00000053455 SANBR (ENSSSCG00000008386) #27 C2orf74 (ENSSSCG00000008384) #28 ENSSSCG00000008383 #29 ENSSSCG00000047643 USP34 (ENSSSCG00000008382) #30 XPO1 (ENSSSCG00000028228) #31 ENSSSCG00000038591 FAM161A (ENSSSCG00000008378) #35 CCT4 (ENSSSCG00000008377) #36 COMMD1 (ENSSSCG00000008376) #37 B3GNT2 (ENSSSCG00000008374) ENSSSCG00000028518 Chacoan peccary MODERN SPECIES 777 CLHC1 (ENSCWAG00000010969) ENSCWAG00000011072 MTIF2 (ENSCWAG00000011119) ENSCWAG00000011162 CCDC88A (ENSCWAG00000011225) ENSCWAG00000011671 CFAP36 (ENSCWAG00000011704) PPP4R3B (ENSCWAG00000011953) #7 PNPT1 (ENSCWAG00000012067) #8 EFEMP1 (ENSCWAG00000012335) #10 CCDC85A (ENSCWAG00000012389) #12 VRK2 (ENSCWAG00000012464) #15 FANCL (ENSCWAG00000012564) #17 BCL11A (ENSCWAG00000012881) #19 PAPOLG (ENSCWAG00000013291) #20 REL (ENSCWAG00000013351) #22 PUS10 (ENSCWAG00000013466) #24 PEX13 (ENSCWAG00000013501) #26 SANBR (ENSCWAG00000013586) #27 C2orf74 (ENSCWAG00000013830) #28 ENSCWAG00000013858 #29 USP34 (ENSCWAG00000013898) #30 XPO1 (ENSCWAG00000014013) #31 FAM161A (ENSCWAG00000014151) #35 CCT4 (ENSCWAG00000014318) #36 ENSCWAG00000014428 #37 B3GNT2 (ENSCWAG00000014453) ENSCWAG00000014470 TMEM17 (ENSCWAG00000014499) EHBP1 (ENSCWAG00000014544) OTX1 (ENSCWAG00000014783) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Camelidae ANCESTRAL SPECIES 12 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00940000165870 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Arabian camel MODERN SPECIES 6 ENSCDRG00005022434 MTIF2 (ENSCDRG00005022436) ENSCDRG00005022437 CCDC88A (ENSCDRG00005022438) ENSCDRG00005022439 CFAP36 (ENSCDRG00005022440) PPP4R3B (ENSCDRG00005022441) #7 PNPT1 (ENSCDRG00005022443) #8 EFEMP1 (ENSCDRG00005022444) #10 CCDC85A (ENSCDRG00005022445) #12 ENSCDRG00005003426 VRK2 (ENSCDRG00005003465) #15 FANCL (ENSCDRG00005003551) #17 BCL11A (ENSCDRG00005003770) #19 PAPOLG (ENSCDRG00005003794) #20 REL (ENSCDRG00005003849) #22 PUS10 (ENSCDRG00005003895) #24 PEX13 (ENSCDRG00005003948) #26 SANBR (ENSCDRG00005004059) #27 ENSCDRG00005004233 #28 ENSCDRG00005004251 #29 ENSCDRG00005004262 #29 USP34 (ENSCDRG00005004329) #30 XPO1 (ENSCDRG00005004581) #31 FAM161A (ENSCDRG00005004663) #35 CCT4 (ENSCDRG00005004760) #36 COMMD1 (ENSCDRG00005004907) #37 B3GNT2 (ENSCDRG00005004917) TMEM17 (ENSCDRG00005004930) ENSCDRG00005004963 EHBP1 (ENSCDRG00005004989) Alpaca MODERN SPECIES 78 BCL11A (ENSVPAG00000000491) #19 PAPOLG (ENSVPAG00000000492) #20 REL (ENSVPAG00000000493) #22 PUS10 (ENSVPAG00000000494) #24 PEX13 (ENSVPAG00000000495) #26 SANBR (ENSVPAG00000000496) #27 ENSVPAG00000000498 ENSVPAG00000000499 #28 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT01000000221758 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 Cetacea ANCESTRAL SPECIES 16 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00960000187413 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Odontoceti ANCESTRAL SPECIES 15 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00960000187413 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00390000009320.ab.a.b ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00960000187413 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00390000009320.ab.a.b ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00960000187413 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00390000009320.ab.a.b ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Monodontidae ANCESTRAL SPECIES 13 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00960000187413 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00390000009320.ab.a.b ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000002190.a.a ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00950000182802.A.ab.a.a.a.a.b.b.a ENSGT00940000157597 Narwhal MODERN SPECIES 305 CCDC88A (ENSMMNG00015009903) CFAP36 (ENSMMNG00015009828) PPP4R3B (ENSMMNG00015009781) #7 PNPT1 (ENSMMNG00015009732) #8 EFEMP1 (ENSMMNG00015009715) #10 ENSMMNG00015009688 CCDC85A (ENSMMNG00015009675) #12 ENSMMNG00015009666 VRK2 (ENSMMNG00015009641) #15 FANCL (ENSMMNG00015009614) #17 ENSMMNG00015009603 ENSMMNG00015009566 ENSMMNG00015009561 BCL11A (ENSMMNG00015009533) #19 PAPOLG (ENSMMNG00015009492) #20 REL (ENSMMNG00015009469) #22 PUS10 (ENSMMNG00015009444) #24 PEX13 (ENSMMNG00015009420) #26 SANBR (ENSMMNG00015009404) #27 ENSMMNG00015009388 C2orf74 (ENSMMNG00015009383) #28 ENSMMNG00015009370 #29 USP34 (ENSMMNG00015009324) #30 XPO1 (ENSMMNG00015009286) #31 FAM161A (ENSMMNG00015009266) #35 CCT4 (ENSMMNG00015009244) #36 COMMD1 (ENSMMNG00015009232) #37 B3GNT2 (ENSMMNG00015009227) TMEM17 (ENSMMNG00015009216) ENSMMNG00015009209 EHBP1 (ENSMMNG00015009174) Beluga whale MODERN SPECIES 42 ENSDLEG00000018407 CCDC88A (ENSDLEG00000018303) CFAP36 (ENSDLEG00000018285) PPP4R3B (ENSDLEG00000018255) #7 PNPT1 (ENSDLEG00000018213) #8 EFEMP1 (ENSDLEG00000018173) #10 CCDC85A (ENSDLEG00000018123) #12 ENSDLEG00000018110 VRK2 (ENSDLEG00000018085) #15 FANCL (ENSDLEG00000018072) #17 ENSDLEG00000018067 ENSDLEG00000018061 ENSDLEG00000018049 BCL11A (ENSDLEG00000018036) #19 PAPOLG (ENSDLEG00000016366) #20 REL (ENSDLEG00000016202) #22 PUS10 (ENSDLEG00000016154) #24 PEX13 (ENSDLEG00000016146) #26 SANBR (ENSDLEG00000015757) #27 ENSDLEG00000015718 AHSA2 (ENSDLEG00000015689) #29 USP34 (ENSDLEG00000014462) #30 XPO1 (ENSDLEG00000014180) #31 ENSDLEG00000014158 #31 FAM161A (ENSDLEG00000014083) #35 CCT4 (ENSDLEG00000014042) #36 COMMD1 (ENSDLEG00000014033) #37 B3GNT2 (ENSDLEG00000014023) TMEM17 (ENSDLEG00000014013) ENSDLEG00000014005 EHBP1 (ENSDLEG00000013833) Vaquita MODERN SPECIES 4 RPS27A (ENSPSNG00000010816) MTIF2 (ENSPSNG00000010890) ENSPSNG00000010985 CCDC88A (ENSPSNG00000011152) CFAP36 (ENSPSNG00000011477) PPP4R3B (ENSPSNG00000011711) #7 PNPT1 (ENSPSNG00000011856) #8 EFEMP1 (ENSPSNG00000011972) #10 CCDC85A (ENSPSNG00000012112) #12 VRK2 (ENSPSNG00000012211) #15 FANCL (ENSPSNG00000012345) #17 ENSPSNG00000012469 ENSPSNG00000012495 BCL11A (ENSPSNG00000012577) #19 PAPOLG (ENSPSNG00000012886) #20 REL (ENSPSNG00000012951) #22 PUS10 (ENSPSNG00000012999) #24 PEX13 (ENSPSNG00000013226) #26 SANBR (ENSPSNG00000013337) #27 C2orf74 (ENSPSNG00000013441) #28 ENSPSNG00000013561 #29 USP34 (ENSPSNG00000013671) #30 XPO1 (ENSPSNG00000013822) #31 FAM161A (ENSPSNG00000013947) #35 CCT4 (ENSPSNG00000014061) #36 COMMD1 (ENSPSNG00000014183) #37 ENSPSNG00000014227 B3GNT2 (ENSPSNG00000014249) TMEM17 (ENSPSNG00000014288) ENSPSNG00000014346 EHBP1 (ENSPSNG00000014468) Dolphin MODERN SPECIES 1409 REL (ENSTTRG00000013347) #22 PUS10 (ENSTTRG00000013351) #24 PEX13 (ENSTTRG00000013356) #26 SANBR (ENSTTRG00000013360) #27 ENSTTRG00000013364 #28 ENSTTRG00000013366 #29 USP34 (ENSTTRG00000013368) #30 XPO1 (ENSTTRG00000013369) #31 Sperm whale MODERN SPECIES 3 CLHC1 (ENSPCTG00005004134) RPS27A (ENSPCTG00005004175) MTIF2 (ENSPCTG00005004195) ENSPCTG00005004222 CCDC88A (ENSPCTG00005004286) CFAP36 (ENSPCTG00005004568) PPP4R3B (ENSPCTG00005004690) #7 PNPT1 (ENSPCTG00005004816) #8 EFEMP1 (ENSPCTG00005004884) #10 CCDC85A (ENSPCTG00005004953) #12 VRK2 (ENSPCTG00005004999) #15 FANCL (ENSPCTG00005005117) #17 ENSPCTG00005005243 BCL11A (ENSPCTG00005005291) #19 PAPOLG (ENSPCTG00005005387) #20 REL (ENSPCTG00005005467) #22 PUS10 (ENSPCTG00005005487) #24 PEX13 (ENSPCTG00005005540) #26 KIAA1841 (ENSPCTG00005005619) #27 ENSPCTG00005005788 C2orf74 (ENSPCTG00005005817) #28 ENSPCTG00005005896 #29 USP34 (ENSPCTG00005005959) #30 XPO1 (ENSPCTG00005006261) #31 FAM161A (ENSPCTG00005006353) #35 CCT4 (ENSPCTG00005006446) #36 COMMD1 (ENSPCTG00005006502) #37 B3GNT2 (ENSPCTG00005006518) TMEM17 (ENSPCTG00005006531) EHBP1 (ENSPCTG00005006603) OTX1 (ENSPCTG00005006769) Blue whale MODERN SPECIES 4 ENSBMSG00010019536 MTIF2 (ENSBMSG00010019514) ENSBMSG00010019490 ENSBMSG00010019475 CCDC88A (ENSBMSG00010019392) CFAP36 (ENSBMSG00010019242) PPP4R3B (ENSBMSG00010019067) #7 PNPT1 (ENSBMSG00010019007) #8 EFEMP1 (ENSBMSG00010018984) #10 CCDC85A (ENSBMSG00010018948) #12 ENSBMSG00010018923 VRK2 (ENSBMSG00010018903) #15 FANCL (ENSBMSG00010018794) #17 BCL11A (ENSBMSG00010018702) #19 PAPOLG (ENSBMSG00010018654) #20 REL (ENSBMSG00010018616) #22 PUS10 (ENSBMSG00010018581) #24 PEX13 (ENSBMSG00010018542) #26 SANBR (ENSBMSG00010018500) #27 C2orf74 (ENSBMSG00010018456) #28 ENSBMSG00010018430 #29 XPO1 (ENSBMSG00010017484) #31 ENSBMSG00010017465 ENSBMSG00010017432 #35 CCT4 (ENSBMSG00010017396) #36 COMMD1 (ENSBMSG00010017362) #37 ENSBMSG00010017350 B3GNT2 (ENSBMSG00010017335) TMEM17 (ENSBMSG00010017316) EHBP1 (ENSBMSG00010016917) OTX1 (ENSBMSG00010016810) Pecora ANCESTRAL SPECIES 5 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000009415 ENSGT00940000154096.b.b.b.a ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a ENSGT00940000153518.d.b.b ENSGT00950000183078.a Yarkand deer MODERN SPECIES 2 ENSCHYG00000019045 CCDC88A (ENSCHYG00000019389) CFAP36 (ENSCHYG00000024204) PPP4R3B (ENSCHYG00000024346) #7 PNPT1 (ENSCHYG00000024494) #8 EFEMP1 (ENSCHYG00000024634) #10 ENSCHYG00000024712 CCDC85A (ENSCHYG00000024756) #12 VRK2 (ENSCHYG00000024857) #15 FANCL (ENSCHYG00000024940) #17 ENSCHYG00000025005 BCL11A (ENSCHYG00000025057) #19 PAPOLG (ENSCHYG00000025213) #20 ENSCHYG00000025309 ENSCHYG00000025318 REL (ENSCHYG00000025330) #22 PUS10 (ENSCHYG00000025359) #24 ENSCHYG00000025415 ENSCHYG00000025436 SANBR (ENSCHYG00000025447) #27 GCFC2 (ENSCHYG00000025525) MRPL19 (ENSCHYG00000025648) ENSCHYG00000025694 SOWAHC (ENSCHYG00000025721) SEPTIN10 (ENSCHYG00000025732) SH3RF3 (ENSCHYG00000025787) EDAR (ENSCHYG00000025811) CCDC138 (ENSCHYG00000025853) RANBP2 (ENSCHYG00000025929) ENSCHYG00000026099 ENSCHYG00000026140 Percora_a ANCESTRAL SPECIES 13 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000008673.m ENSGT00390000009415 ENSGT00940000154096.b.b.b.a ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a ENSGT00940000153518.d.b.b Siberian musk deer MODERN SPECIES 243 ENSMMSG00000004022 CCDC88A (ENSMMSG00000003944) CFAP36 (ENSMMSG00000003922) PPP4R3B (ENSMMSG00000003900) #7 PNPT1 (ENSMMSG00000003861) #8 EFEMP1 (ENSMMSG00000003787) #10 CCDC85A (ENSMMSG00000003729) #12 ENSMMSG00000003697 ENSMMSG00000003681 ENSMMSG00000003672 VRK2 (ENSMMSG00000003653) #15 FANCL (ENSMMSG00000003612) #17 ENSMMSG00000003585 BCL11A (ENSMMSG00000003548) #19 PAPOLG (ENSMMSG00000003433) #20 REL (ENSMMSG00000003384) #22 PUS10 (ENSMMSG00000003350) #24 PEX13 (ENSMMSG00000003332) #26 SANBR (ENSMMSG00000003218) #27 GCFC2 (ENSMMSG00000003101) ENSMMSG00000003071 MRPL19 (ENSMMSG00000003046) EVA1A (ENSMMSG00000003011) SEPTIN10 (ENSMMSG00000002940) SH3RF3 (ENSMMSG00000002874) EDAR (ENSMMSG00000002839) CCDC138 (ENSMMSG00000002771) ENSMMSG00000002741 RANBP2 (ENSMMSG00000002635) ENSMMSG00000002470 GCC2 (ENSMMSG00000002364) Bovidae ANCESTRAL SPECIES 5 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000008673.m ENSGT00390000009415 ENSGT00940000153112.D.d ENSGT00940000154096.b.b.b.a ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a Bovinae ANCESTRAL SPECIES 4 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000166869 ENSGT00960000191051 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000008673.m ENSGT00390000009415 ENSGT00940000153112.D.d ENSGT00940000154096.b.b.b.a ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a Bos ANCESTRAL SPECIES 5 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000166869 ENSGT00960000191051 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000008673.m ENSGT00390000009415 ENSGT00940000153112.D.d ENSGT00940000154096.b.b.b.a ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a Bos_b ANCESTRAL SPECIES 9 ENSGT00940000165870 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000166869 ENSGT00960000191051 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000008673.m ENSGT00390000009415 ENSGT00940000153112.D.d ENSGT00940000154096.b.b.b.a ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a ENSGT00940000153518.d.b.b Hybrid Bos Indicus MODERN SPECIES 2 MTIF2 (ENSBIXG00005002925) ENSBIXG00005017989 CCDC88A (ENSBIXG00005017956) CFAP36 (ENSBIXG00005017832) PPP4R3B (ENSBIXG00005017770) #7 PNPT1 (ENSBIXG00005017706) #8 EFEMP1 (ENSBIXG00005017663) #10 CCDC85A (ENSBIXG00005002841) #12 ENSBIXG00005017352 VRK2 (ENSBIXG00005017329) #15 FANCL (ENSBIXG00005017270) #17 ENSBIXG00005017166 ENSBIXG00005017155 BCL11A (ENSBIXG00005017091) #19 PAPOLG (ENSBIXG00005016967) #20 REL (ENSBIXG00005016889) #22 PUS10 (ENSBIXG00005016829) #24 PEX13 (ENSBIXG00005016781) #26 SANBR (ENSBIXG00005016730) #27 GCFC2 (ENSBIXG00005007325) MRPL19 (ENSBIXG00005016457) ENSBIXG00005016421 ENSBIXG00005016402 ENSBIXG00005007030 SEPTIN10 (ENSBIXG00005016334) SH3RF3 (ENSBIXG00005016145) EDAR (ENSBIXG00005002560) CCDC138 (ENSBIXG00005016061) RANBP2 (ENSBIXG00005015929) ENSBIXG00005005499 ENSBIXG00005014900 Cow MODERN SPECIES 2 CLHC1 (ENSBTAG00000000295) RPS27A (ENSBTAG00000015473) MTIF2 (ENSBTAG00000015481) PRORSD1 (ENSBTAG00000017460) CCDC88A (ENSBTAG00000017469) CFAP36 (ENSBTAG00000000542) PPP4R3B (ENSBTAG00000000545) #7 PNPT1 (ENSBTAG00000008909) #8 EFEMP1 (ENSBTAG00000017448) #10 CCDC85A (ENSBTAG00000012394) #12 VRK2 (ENSBTAG00000033801) #15 FANCL (ENSBTAG00000005870) #17 ENSBTAG00000048348 BCL11A (ENSBTAG00000016534) #19 PAPOLG (ENSBTAG00000007414) #20 REL (ENSBTAG00000015386) #22 PUS10 (ENSBTAG00000009694) #24 PEX13 (ENSBTAG00000005257) #26 SANBR (ENSBTAG00000054531) #27 GCFC2 (ENSBTAG00000008048) ENSBTAG00000053292 MRPL19 (ENSBTAG00000002557) SEPTIN10 (ENSBTAG00000022461) SH3RF3 (ENSBTAG00000038011) EDAR (ENSBTAG00000019628) CCDC138 (ENSBTAG00000000157) RANBP2 (ENSBTAG00000000152) ENSBTAG00000054181 LIMS1 (ENSBTAG00000010971) GCC2 (ENSBTAG00000016038) ENSBTAG00000054241 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000165870 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000166869 ENSGT00960000191051 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000009415 ENSGT00940000153112.D.d ENSGT00940000154096.b.b.b.a ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00910000148474 ENSGT00940000154389.a ENSGT00940000153518.d.b.b Domestic yak MODERN SPECIES 28 ENSBGRG00000017733 CCDC88A (ENSBGRG00000017768) CFAP36 (ENSBGRG00000018258) PPP4R3B (ENSBGRG00000018551) #7 PNPT1 (ENSBGRG00000018820) #8 ENSBGRG00000019073 EFEMP1 (ENSBGRG00000019118) #10 CCDC85A (ENSBGRG00000005833) #12 VRK2 (ENSBGRG00000005937) #15 FANCL (ENSBGRG00000006017) #17 ENSBGRG00000006305 ENSBGRG00000006414 ENSBGRG00000006434 BCL11A (ENSBGRG00000006493) #19 PAPOLG (ENSBGRG00000006713) #20 REL (ENSBGRG00000007184) #22 PUS10 (ENSBGRG00000007339) #24 PEX13 (ENSBGRG00000007532) #26 ENSBGRG00000007564 ENSBGRG00000007576 SANBR (ENSBGRG00000007616) #27 GCFC2 (ENSBGRG00000007889) MRPL19 (ENSBGRG00000008224) ENSBGRG00000008367 EVA1A (ENSBGRG00000008439) SOWAHC (ENSBGRG00000008519) SEPTIN10 (ENSBGRG00000008553) SH3RF3 (ENSBGRG00000008832) EDAR (ENSBGRG00000008919) CCDC138 (ENSBGRG00000008976) RANBP2 (ENSBGRG00000009160) Wild yak MODERN SPECIES 197 PAPOLG (ENSBMUG00000004430) #20 REL (ENSBMUG00000004455) #22 PUS10 (ENSBMUG00000004482) #24 PEX13 (ENSBMUG00000004496) #26 SANBR (ENSBMUG00000004535) #27 GCFC2 (ENSBMUG00000004657) MRPL19 (ENSBMUG00000004686) ENSBMUG00000004697 EVA1A (ENSBMUG00000004741) SEPTIN10 (ENSBMUG00000004797) American bison MODERN SPECIES 3344 ENSBBBG00000022184 VRK2 (ENSBBBG00000022177) #15 FANCL (ENSBBBG00000022110) #17 ENSBBBG00000005815 ENSBBBG00000021993 ENSBBBG00000005813 ENSBBBG00000021975 #19 PAPOLG (ENSBBBG00000021917) #20 REL (ENSBBBG00000005796) #22 PUS10 (ENSBBBG00000007680) #24 PEX13 (ENSBBBG00000021817) #26 SANBR (ENSBBBG00000021794) #27 GCFC2 (ENSBBBG00000005750) MRPL19 (ENSBBBG00000005745) ENSBBBG00000021566 ENSBBBG00000021556 EVA1A (ENSBBBG00000021541) SEPTIN10 (ENSBBBG00000021522) SH3RF3 (ENSBBBG00000021463) EDAR (ENSBBBG00000021445) CCDC138 (ENSBBBG00000021433) RANBP2 (ENSBBBG00000005701) ENSBBBG00000020842 ENSBBBG00000020809 Caprinae ANCESTRAL SPECIES 9 ENSGT00910000144152.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785.c ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000164950 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000000455.b ENSGT00390000009415 ENSGT00940000153112.D.d ENSGT00940000154096.b.b.b.a ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00940000154389.a ENSGT00910000148474 ENSGT00940000153518.d.b.b ENSGT00950000183078.a Goat MODERN SPECIES 2 MTIF2 (ENSCHIG00000010297) ENSCHIG00000010720 CCDC88A (ENSCHIG00000010536) ENSCHIG00000007261 PPP4R3B (ENSCHIG00000010142) #7 PNPT1 (ENSCHIG00000025034) #8 EFEMP1 (ENSCHIG00000021066) #10 CCDC85A (ENSCHIG00000016770) #12 ENSCHIG00000020893 VRK2 (ENSCHIG00000017032) #15 ENSCHIG00000018980 #17 ENSCHIG00000015459 BCL11A (ENSCHIG00000013420) #19 ENSCHIG00000009852 PAPOLG (ENSCHIG00000015082) #20 REL (ENSCHIG00000019857) #22 PUS10 (ENSCHIG00000011118) #24 PEX13 (ENSCHIG00000013394) #26 SANBR (ENSCHIG00000026182) #27 GCFC2 (ENSCHIG00000015942) MRPL19 (ENSCHIG00000018687) ENSCHIG00000026172 EVA1A (ENSCHIG00000014290) SEPTIN10 (ENSCHIG00000025630) SH3RF3 (ENSCHIG00000015843) EDAR (ENSCHIG00000024441) CCDC138 (ENSCHIG00000015627) RANBP2 (ENSCHIG00000012686) ENSCHIG00000009712 ENSCHIG00000022414 GCC2 (ENSCHIG00000007988) Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 19 RTN4 (ENSOARG00020000804) RPS27A (ENSOARG00020000741) MTIF2 (ENSOARG00020000721) ENSOARG00020000668 CCDC88A (ENSOARG00020000430) CFAP36 (ENSOARG00020000353) PPP4R3B (ENSOARG00020000304) #7 PNPT1 (ENSOARG00020000229) #8 EFEMP1 (ENSOARG00020000199) #10 CCDC85A (ENSOARG00020003231) #12 FANCL (ENSOARG00020003084) #17 ENSOARG00020003034 ENSOARG00020003018 #22 BCL11A (ENSOARG00020002953) #19 PAPOLG (ENSOARG00020002875) #20 REL (ENSOARG00020002832) #22 PUS10 (ENSOARG00020002818) #24 PEX13 (ENSOARG00020002802) #26 SANBR (ENSOARG00020002778) #27 MRPL19 (ENSOARG00020002714) ENSOARG00020002681 ENSOARG00020002672 EVA1A (ENSOARG00020002662) SEPTIN10 (ENSOARG00020002613) CCDC138 (ENSOARG00020002474) RANBP2 (ENSOARG00020002287) ENSOARG00020002071 ENSOARG00020001948 SLC5A7 (ENSOARG00020001925) ST6GAL2 (ENSOARG00020001914) ENSOARG00020001906 Rambouillet Sheep MODERN SPECIES 19 ENSOARG00020001948 ENSOARG00020002071 RANBP2 (ENSOARG00020002287) CCDC138 (ENSOARG00020002474) SEPTIN10 (ENSOARG00020002613) EVA1A (ENSOARG00020002662) ENSOARG00020002672 ENSOARG00020002681 MRPL19 (ENSOARG00020002714) SANBR (ENSOARG00020002778) #27 PEX13 (ENSOARG00020002802) #26 PUS10 (ENSOARG00020002818) #24 REL (ENSOARG00020002832) #22 PAPOLG (ENSOARG00020002875) #20 BCL11A (ENSOARG00020002953) #19 ENSOARG00020003018 #22 ENSOARG00020003034 FANCL (ENSOARG00020003084) #17 CCDC85A (ENSOARG00020003231) #12 EFEMP1 (ENSOARG00020000199) #10 PNPT1 (ENSOARG00020000229) #8 PPP4R3B (ENSOARG00020000304) #7 CFAP36 (ENSOARG00020000353) CCDC88A (ENSOARG00020000430) ENSOARG00020000668 MTIF2 (ENSOARG00020000721) RPS27A (ENSOARG00020000741) RTN4 (ENSOARG00020000804) EML6 (ENSOARG00020000918) SPTBN1 (ENSOARG00020000992) C2orf73 (ENSOARG00020001065) Atlantogenata ANCESTRAL SPECIES 14 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 Xenarthra ANCESTRAL SPECIES 352 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 Sloth MODERN SPECIES 4904 REL (ENSCHOG00000010935) #22 PUS10 (ENSCHOG00000010952) #24 Armadillo MODERN SPECIES 2758 ENSDNOG00000043511 VRK2 (ENSDNOG00000007029) #15 FANCL (ENSDNOG00000007041) #17 ENSDNOG00000035251 ENSDNOG00000010776 BCL11A (ENSDNOG00000019842) #19 PAPOLG (ENSDNOG00000011326) #20 REL (ENSDNOG00000011359) #22 PUS10 (ENSDNOG00000001706) #24 PEX13 (ENSDNOG00000041265) #26 SANBR (ENSDNOG00000014791) #27 C2orf74 (ENSDNOG00000024848) #28 ENSDNOG00000040415 #29 USP34 (ENSDNOG00000003767) #30 XPO1 (ENSDNOG00000005805) #31 Afrotheria ANCESTRAL SPECIES 39 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 Afrotheria_a ANCESTRAL SPECIES 36 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 Elephant MODERN SPECIES 438 EML6 (ENSLAFG00000020864) RTN4 (ENSLAFG00000011641) CLHC1 (ENSLAFG00000016854) RPS27A (ENSLAFG00000023133) MTIF2 (ENSLAFG00000007341) ENSLAFG00000007344 CCDC88A (ENSLAFG00000007346) CFAP36 (ENSLAFG00000017814) PPP4R3B (ENSLAFG00000017825) #7 PNPT1 (ENSLAFG00000021462) #8 EFEMP1 (ENSLAFG00000009070) #10 CCDC85A (ENSLAFG00000002154) #12 VRK2 (ENSLAFG00000012268) #15 BCL11A (ENSLAFG00000003101) #19 PAPOLG (ENSLAFG00000010404) #20 REL (ENSLAFG00000013507) #22 PUS10 (ENSLAFG00000010782) #24 PEX13 (ENSLAFG00000000830) #26 SANBR (ENSLAFG00000016305) #27 ENSLAFG00000020666 #28 USP34 (ENSLAFG00000016317) #30 XPO1 (ENSLAFG00000014553) #31 FAM161A (ENSLAFG00000029260) #35 CCT4 (ENSLAFG00000004344) #36 ENSLAFG00000030691 #37 ENSLAFG00000004349 #37 B3GNT2 (ENSLAFG00000002799) Hyrax MODERN SPECIES 4539 REL (ENSPCAG00000017047) #22 PUS10 (ENSPCAG00000017049) #24 Tenrec MODERN SPECIES 1641 REL (ENSETEG00000002607) #22 PUS10 (ENSETEG00000002613) #24 PEX13 (ENSETEG00000002617) #26 Marsupialia ANCESTRAL SPECIES 19 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00390000004911 #28 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Diprotodontia ANCESTRAL SPECIES 2 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956.n #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956.n #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a koala MODERN SPECIES 20 BCL11A (ENSPCIG00000028097) #19 PAPOLG (ENSPCIG00000028094) #20 REL (ENSPCIG00000028091) #22 PUS10 (ENSPCIG00000028089) #24 PEX13 (ENSPCIG00000028088) #26 SANBR (ENSPCIG00000028080) #27 ENSPCIG00000028078 #29 ENSPCIG00000028076 #29 USP34 (ENSPCIG00000027791) #30 XPO1 (ENSPCIG00000027737) #31 ENSPCIG00000024939 #35 ENSPCIG00000024933 #36 ENSPCIG00000024931 COMMD1 (ENSPCIG00000024929) #37 ENSPCIG00000018941 #14 B3GNT2 (ENSPCIG00000024925) TMEM17 (ENSPCIG00000024919) EHBP1 (ENSPCIG00000005257) Common wonbat MODERN SPECIES 1017 CLHC1 (ENSVURG00010014155) ENSVURG00010014144 MTIF2 (ENSVURG00010014139) ENSVURG00010014135 CCDC88A (ENSVURG00010014027) CFAP36 (ENSVURG00010013983) ENSVURG00010013950 #7 PNPT1 (ENSVURG00010013927) #8 ENSVURG00010013924 EFEMP1 (ENSVURG00010013908) #10 CCDC85A (ENSVURG00010013878) #12 VRK2 (ENSVURG00010013840) #15 FANCL (ENSVURG00010013810) #17 BCL11A (ENSVURG00010013786) #19 PAPOLG (ENSVURG00010013767) #20 REL (ENSVURG00010013755) #22 PUS10 (ENSVURG00010013746) #24 PEX13 (ENSVURG00010013735) #26 SANBR (ENSVURG00010013712) #27 ENSVURG00010013697 #29 USP34 (ENSVURG00010013652) #30 XPO1 (ENSVURG00010013626) #31 ENSVURG00010013620 ENSVURG00010013612 #35 CCT4 (ENSVURG00010013602) #36 COMMD1 (ENSVURG00010013596) #37 B3GNT2 (ENSVURG00010013583) TMEM17 (ENSVURG00010013563) EHBP1 (ENSVURG00010013361) OTX1 (ENSVURG00010013336) ENSVURG00010013329 Wallaby MODERN SPECIES 6706 REL (ENSMEUG00000000072) #22 Tasmanian devil MODERN SPECIES 1 CLHC1 (ENSSHAG00000005461) ENSSHAG00000026110 MTIF2 (ENSSHAG00000004418) ENSSHAG00000003753 CCDC88A (ENSSHAG00000000522) CFAP36 (ENSSHAG00000014593) ENSSHAG00000014269 #7 PNPT1 (ENSSHAG00000030191) #8 EFEMP1 (ENSSHAG00000012927) #10 CCDC85A (ENSSHAG00000009530) #12 ENSSHAG00000028498 VRK2 (ENSSHAG00000007771) #15 FANCL (ENSSHAG00000007148) #17 BCL11A (ENSSHAG00000015804) #19 PAPOLG (ENSSHAG00000014942) #20 REL (ENSSHAG00000014405) #22 PUS10 (ENSSHAG00000014089) #24 PEX13 (ENSSHAG00000013994) #26 SANBR (ENSSHAG00000013637) #27 ENSSHAG00000013408 #28 ENSSHAG00000013229 #29 USP34 (ENSSHAG00000012141) #30 XPO1 (ENSSHAG00000011230) #31 ENSSHAG00000008962 #35 CCT4 (ENSSHAG00000008579) #36 B3GNT2 (ENSSHAG00000027237) COMMD1 (ENSSHAG00000005803) #37 TMEM17 (ENSSHAG00000014235) EHBP1 (ENSSHAG00000011490) OTX1 (ENSSHAG00000011389) WDPCP (ENSSHAG00000009447) Opossum MODERN SPECIES ENSMODG00000001835 CCDC88A (ENSMODG00000001885) CFAP36 (ENSMODG00000001894) ENSMODG00000001935 #7 PNPT1 (ENSMODG00000001984) #8 EFEMP1 (ENSMODG00000002005) #10 CCDC85A (ENSMODG00000002041) #12 ENSMODG00000039070 ENSMODG00000040320 ENSMODG00000002056 ENSMODG00000002096 #15 FANCL (ENSMODG00000002105) #17 BCL11A (ENSMODG00000002114) #19 PAPOLG (ENSMODG00000002160) #20 ENSMODG00000042596 REL (ENSMODG00000002172) #22 PUS10 (ENSMODG00000002202) #24 PEX13 (ENSMODG00000002217) #26 SANBR (ENSMODG00000002252) #27 ENSMODG00000002285 #29 ENSMODG00000023119 USP34 (ENSMODG00000002734) #30 XPO1 (ENSMODG00000002831) #31 ENSMODG00000002850 #35 ENSMODG00000002882 #36 COMMD1 (ENSMODG00000002887) #37 B3GNT2 (ENSMODG00000023125) TMEM17 (ENSMODG00000002895) ENSMODG00000046978 EHBP1 (ENSMODG00000002986) OTX1 (ENSMODG00000037978) Platypus MODERN SPECIES 20 ENSOANG00000040841 CLHC1 (ENSOANG00000011190) ENSOANG00000045853 MTIF2 (ENSOANG00000011187) ENSOANG00000011186 CCDC88A (ENSOANG00000011182) CFAP36 (ENSOANG00000042731) ENSOANG00000011179 #7 PNPT1 (ENSOANG00000011178) #8 EFEMP1 (ENSOANG00000011177) #10 CCDC85A (ENSOANG00000011176) #12 VRK2 (ENSOANG00000011175) #15 FANCL (ENSOANG00000011174) #17 BCL11A (ENSOANG00000020939) #19 PAPOLG (ENSOANG00000012403) #20 REL (ENSOANG00000012405) #22 PUS10 (ENSOANG00000012408) #24 PEX13 (ENSOANG00000012410) #26 SANBR (ENSOANG00000012411) #27 ENSOANG00000012414 #29 USP34 (ENSOANG00000012415) #30 XPO1 (ENSOANG00000012417) #31 ENSOANG00000012418 #35 CCT4 (ENSOANG00000012419) #36 COMMD1 (ENSOANG00000012420) #37 B3GNT2 (ENSOANG00000012421) TMEM17 (ENSOANG00000012422) EHBP1 (ENSOANG00000012423) OTX1 (ENSOANG00000044489) WDPCP (ENSOANG00000012425) MDH1 (ENSOANG00000012426) Sauria ANCESTRAL SPECIES 1 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Archelosauria ANCESTRAL SPECIES 1 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Archosauria ANCESTRAL SPECIES 29 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Aves ANCESTRAL SPECIES 35 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 Neognathae ANCESTRAL SPECIES 32 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 Galloanserae ANCESTRAL SPECIES 29 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 Anatidae ANCESTRAL SPECIES 45 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00940000175281 ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 Pink-footed goose MODERN SPECIES 195 VRK2 (ENSABRG00000013908) #15 FANCL (ENSABRG00000013926) #17 ENSABRG00000013977 BCL11A (ENSABRG00000013983) #19 PAPOLG (ENSABRG00000014019) #20 REL (ENSABRG00000014034) #22 PUS10 (ENSABRG00000014039) #24 Duck MODERN SPECIES 21 RPS27A (ENSAPLG00000005406) ENSAPLG00000023927 ENSAPLG00000019590 ENSAPLG00000000689 CCDC88A (ENSAPLG00000004375) CFAP36 (ENSAPLG00000026682) ENSAPLG00000003697 #7 PNPT1 (ENSAPLG00000002885) #8 EFEMP1 (ENSAPLG00000001442) #10 CCDC85A (ENSAPLG00000001419) #12 ENSAPLG00000030764 VRK2 (ENSAPLG00000016420) #15 FANCL (ENSAPLG00000016346) #17 BCL11A (ENSAPLG00000029796) #19 PAPOLG (ENSAPLG00000006813) #20 REL (ENSAPLG00000006795) #22 ENSAPLG00000006347 #24 ENSAPLG00000025470 PEX13 (ENSAPLG00000006240) #26 SANBR (ENSAPLG00000005956) #27 ENSAPLG00000005498 #29 USP34 (ENSAPLG00000004912) #30 ENSAPLG00000004008 #31 ENSAPLG00000030289 #31 FAM161A (ENSAPLG00000003944) #35 CCT4 (ENSAPLG00000003237) #36 LRRN4 (ENSAPLG00000003229) FERMT1 (ENSAPLG00000001367) BMP2 (ENSAPLG00000000919) HAO1 (ENSAPLG00000012530) TMX4 (ENSAPLG00000012866) Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES 29 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a.g #19 ENSGT00940000156467 #20 ENSGT00940000158732.e #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000156568 ENSGT00940000155564 ENSGT00940000154864.b ENSGT00960000190327 ENSGT00390000011103.A ENSGT00390000011433 ENSGT00390000007723 ENSGT00940000156323.p Japanese quail MODERN SPECIES 21 CFAP36 (ENSCJPG00005000800) ENSCJPG00005000794 ENSCJPG00005000786 ENSCJPG00005000785 ENSCJPG00005016787 #7 PNPT1 (ENSCJPG00005016570) #8 EFEMP1 (ENSCJPG00005016569) #10 CCDC85A (ENSCJPG00005016565) #12 VRK2 (ENSCJPG00005016556) #15 FANCL (ENSCJPG00005016555) #17 ENSCJPG00005016553 ENSCJPG00005016542 BCL11A (ENSCJPG00005016541) #19 ENSCJPG00005016540 PAPOLG (ENSCJPG00005016294) #20 REL (ENSCJPG00005016290) #22 PUS10 (ENSCJPG00005016289) #24 PEX13 (ENSCJPG00005016288) #26 SANBR (ENSCJPG00005016286) #27 ENSCJPG00005016285 #29 USP34 (ENSCJPG00005016046) #30 XPO1 (ENSCJPG00005016017) #31 ENSCJPG00005016015 EML6 (ENSCJPG00005015980) SPTBN1 (ENSCJPG00005015977) ENSCJPG00005015972 ACYP2 (ENSCJPG00005015971) PSME4 (ENSCJPG00005015921) GPR75 (ENSCJPG00005015919) ENSCJPG00005015918 ERLEC1 (ENSCJPG00005015888) Phasianidae_b ANCESTRAL SPECIES 28 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.g #19 ENSGT00910000147025 ENSGT00940000156467 #20 ENSGT00940000158732.e #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000156568 ENSGT00940000155564 ENSGT00940000154864.b ENSGT00960000190327 ENSGT00390000011103.A ENSGT00390000011433 ENSGT00390000007723 ENSGT00940000156323.p Turkey MODERN SPECIES 11 ENSMGAG00000003550 ENSMGAG00000003527 ENSMGAG00000003494 CRNKL1 (ENSMGAG00000003452) ENSMGAG00000003401 RALGAPA2 (ENSMGAG00000003311) ENSMGAG00000021790 ENSMGAG00000001494 #31 ENSMGAG00000001496 #31 ENSMGAG00000001569 #29 ENSMGAG00000001527 #30 ENSMGAG00000001641 #27 ENSMGAG00000022332 #27 PEX13 (ENSMGAG00000001669) #26 ENSMGAG00000001683 #24 ENSMGAG00000001721 #22 ENSMGAG00000019858 #24 ENSMGAG00000017856 #22 ENSMGAG00000001741 #20 ENSMGAG00000018153 #20 ENSMGAG00000017689 #19 ENSMGAG00000013042 #19 ENSMGAG00000021235 ENSMGAG00000001872 #15 ENSMGAG00000001852 #17 ENSMGAG00000001924 #12 ENSMGAG00000001940 #10 PNPT1 (ENSMGAG00000001952) #8 ENSMGAG00000002064 ENSMGAG00000002021 #7 ENSMGAG00000002259 Chicken MODERN SPECIES 22 RPS27A (ENSGALG00010016773) MTIF2 (ENSGALG00010016778) PRORSD1P (ENSGALG00010016780) CCDC88A (ENSGALG00010016835) ENSGALG00010019365 CFAP36 (ENSGALG00010016865) ENSGALG00010016882 #7 PNPT1 (ENSGALG00010019166) #8 EFEMP1 (ENSGALG00010018885) #10 CCDC85A (ENSGALG00010018897) #12 VRK2 (ENSGALG00010017065) #15 FANCL (ENSGALG00010017104) #17 BCL11A (ENSGALG00010017162) #19 ENSGALG00010017180 PAPOLG (ENSGALG00010018975) #20 REL (ENSGALG00010019036) #22 PUS10 (ENSGALG00010019062) #24 PEX13 (ENSGALG00010019087) #26 KIAA1841 (ENSGALG00010019135) #27 ENSGALG00010019281 AHSA2 (ENSGALG00010019287) #29 USP34 (ENSGALG00010019302) #30 XPO1 (ENSGALG00010019337) #31 ENSGALG00010016630 RTN4 (ENSGALG00010016706) ENSGALG00010016754 EML6 (ENSGALG00010016762) SPTBN1 (ENSGALG00010016896) ENSGALG00010016906 ACYP2 (ENSGALG00010016916) PSME4 (ENSGALG00010016938) Phasianidae ANCESTRAL SPECIES ENSGT00940000158732.f #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000158732.f #22 Turkey MODERN SPECIES 11 ENSMGAG00000003494 CRNKL1 (ENSMGAG00000003452) ENSMGAG00000003401 RALGAPA2 (ENSMGAG00000003311) ENSMGAG00000021790 ENSMGAG00000001494 #31 ENSMGAG00000001496 #31 ENSMGAG00000001569 #29 ENSMGAG00000001527 #30 ENSMGAG00000001641 #27 ENSMGAG00000022332 #27 PEX13 (ENSMGAG00000001669) #26 ENSMGAG00000001683 #24 ENSMGAG00000001721 #22 ENSMGAG00000019858 #24 ENSMGAG00000017856 #22 ENSMGAG00000001741 #20 ENSMGAG00000018153 #20 ENSMGAG00000017689 #19 ENSMGAG00000013042 #19 ENSMGAG00000021235 ENSMGAG00000001872 #15 ENSMGAG00000001852 #17 ENSMGAG00000001924 #12 ENSMGAG00000001940 #10 PNPT1 (ENSMGAG00000001952) #8 ENSMGAG00000002064 ENSMGAG00000002021 #7 ENSMGAG00000002259 ENSMGAG00000002107 ENSMGAG00000018593 Neognathae_b ANCESTRAL SPECIES 32 ENSGT00940000157820.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.c.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00910000147025 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 Passeriformes ANCESTRAL SPECIES 31 ENSGT00940000157820.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.c.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00910000147025 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 Passeriformes_d ANCESTRAL SPECIES 32 ENSGT00940000157820.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.c.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00910000147025 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 Passeriformes_g ANCESTRAL SPECIES 37 ENSGT00940000155564 ENSGT00940000156568 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.c.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 Medium ground finch MODERN SPECIES 44 ENSGFOG00000005720 SPTBN1 (ENSGFOG00000005582) EML6 (ENSGFOG00000004546) RTN4 (ENSGFOG00000004434) RPS27A (ENSGFOG00000004423) ENSGFOG00000004412 CCDC88A (ENSGFOG00000004260) ENSGFOG00000004210 #7 PNPT1 (ENSGFOG00000004186) #8 EFEMP1 (ENSGFOG00000004174) #10 CCDC85A (ENSGFOG00000004151) #12 VRK2 (ENSGFOG00000004135) #15 FANCL (ENSGFOG00000004095) #17 ENSGFOG00000004073 #19 PAPOLG (ENSGFOG00000004051) #20 REL (ENSGFOG00000003734) #22 PUS10 (ENSGFOG00000003695) #24 PEX13 (ENSGFOG00000003677) #26 SANBR (ENSGFOG00000003643) #27 ENSGFOG00000003636 ENSGFOG00000003593 #29 XPO1 (ENSGFOG00000003256) #31 FAM161A (ENSGFOG00000003218) #35 CCT4 (ENSGFOG00000002763) #36 LRRN4 (ENSGFOG00000002686) FERMT1 (ENSGFOG00000002667) BMP2 (ENSGFOG00000002651) ENSGFOG00000002625 HAO1 (ENSGFOG00000002607) PLCB1 (ENSGFOG00000001832) PLCB4 (ENSGFOG00000001705) Passeroidea ANCESTRAL SPECIES 34 ENSGT00940000155564 ENSGT00940000156568 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.c.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000167185 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 Zebra finch MODERN SPECIES 23 EML6 (ENSTGUG00000007118) RTN4 (ENSTGUG00000007090) RPS27A (ENSTGUG00000007086) MTIF2 (ENSTGUG00000007064) ENSTGUG00000007062 CCDC88A (ENSTGUG00000007001) CFAP36 (ENSTGUG00000006976) ENSTGUG00000006962 #7 PNPT1 (ENSTGUG00000006908) #8 EFEMP1 (ENSTGUG00000006870) #10 CCDC85A (ENSTGUG00000006863) #12 VRK2 (ENSTGUG00000006838) #15 FANCL (ENSTGUG00000006799) #17 BCL11A (ENSTGUG00000006790) #19 PAPOLG (ENSTGUG00000006762) #20 REL (ENSTGUG00000006743) #22 PUS10 (ENSTGUG00000006727) #24 ENSTGUG00000006723 SANBR (ENSTGUG00000006710) #27 AHSA2P (ENSTGUG00000026266) #29 USP34 (ENSTGUG00000006553) #30 XPO1 (ENSTGUG00000006512) #31 FAM161A (ENSTGUG00000006509) #35 CCT4 (ENSTGUG00000006478) #36 LRRN4 (ENSTGUG00000006475) FERMT1 (ENSTGUG00000006448) BMP2 (ENSTGUG00000018981) HAO1 (ENSTGUG00000006420) TMX4 (ENSTGUG00000019958) PLCB1 (ENSTGUG00000006294) PLCB4 (ENSTGUG00000006214) Common canary MODERN SPECIES 23 ENSSCAG00000014183 RPS27A (ENSSCAG00000014178) MTIF2 (ENSSCAG00000014172) ENSSCAG00000014168 CCDC88A (ENSSCAG00000014138) CFAP36 (ENSSCAG00000014124) ENSSCAG00000014117 #7 PNPT1 (ENSSCAG00000014095) #8 EFEMP1 (ENSSCAG00000014079) #10 CCDC85A (ENSSCAG00000014069) #12 VRK2 (ENSSCAG00000014061) #15 FANCL (ENSSCAG00000014056) #17 ENSSCAG00000014050 BCL11A (ENSSCAG00000014043) #19 PAPOLG (ENSSCAG00000014037) #20 REL (ENSSCAG00000014030) #22 PUS10 (ENSSCAG00000014021) #24 PEX13 (ENSSCAG00000014014) #26 SANBR (ENSSCAG00000014007) #27 ENSSCAG00000014004 ENSSCAG00000013998 #29 USP34 (ENSSCAG00000013613) #30 XPO1 (ENSSCAG00000013488) #31 FAM161A (ENSSCAG00000013480) #35 CCT4 (ENSSCAG00000013477) #36 LRRN4 (ENSSCAG00000013475) FERMT1 (ENSSCAG00000013472) BMP2 (ENSSCAG00000013470) HAO1 (ENSSCAG00000013465) TMX4 (ENSSCAG00000013460) PLCB1 (ENSSCAG00000012853) Flycatcher MODERN SPECIES 21 RPS27A (ENSFALG00000025507) MTIF2 (ENSFALG00000011256) ENSFALG00000011248 CCDC88A (ENSFALG00000011240) CFAP36 (ENSFALG00000023619) ENSFALG00000011223 #7 PNPT1 (ENSFALG00000011214) #8 EFEMP1 (ENSFALG00000011207) #10 CCDC85A (ENSFALG00000011197) #12 VRK2 (ENSFALG00000011171) #15 FANCL (ENSFALG00000011139) #17 ENSFALG00000023233 BCL11A (ENSFALG00000011123) #19 ENSFALG00000025162 PAPOLG (ENSFALG00000011079) #20 REL (ENSFALG00000011066) #22 PUS10 (ENSFALG00000011063) #24 PEX13 (ENSFALG00000025219) #26 SANBR (ENSFALG00000011044) #27 ENSFALG00000011014 #29 USP34 (ENSFALG00000010997) #30 XPO1 (ENSFALG00000010989) #31 FAM161A (ENSFALG00000010985) #35 CCT4 (ENSFALG00000010978) #36 LRRN4 (ENSFALG00000025370) ENSFALG00000010970 BMP2 (ENSFALG00000010964) PLCB1 (ENSFALG00000010955) ENSFALG00000026862 HAO1 (ENSFALG00000010925) PLCB4 (ENSFALG00000011105) Great tit MODERN SPECIES 22 ENSPMJG00000014419 MTIF2 (ENSPMJG00000014420) ENSPMJG00000014421 CCDC88A (ENSPMJG00000014422) CFAP36 (ENSPMJG00000014424) ENSPMJG00000014425 #7 PNPT1 (ENSPMJG00000014426) #8 EFEMP1 (ENSPMJG00000014427) #10 CCDC85A (ENSPMJG00000014428) #12 VRK2 (ENSPMJG00000014436) #15 FANCL (ENSPMJG00000014437) #17 ENSPMJG00000014442 BCL11A (ENSPMJG00000014443) #19 ENSPMJG00000014444 PAPOLG (ENSPMJG00000014445) #20 REL (ENSPMJG00000014636) #22 PUS10 (ENSPMJG00000014637) #24 PEX13 (ENSPMJG00000014639) #26 SANBR (ENSPMJG00000014640) #27 ENSPMJG00000014641 #29 ENSPMJG00000014642 XPO1 (ENSPMJG00000014643) #31 FAM161A (ENSPMJG00000014644) #35 CCT4 (ENSPMJG00000014645) #36 LRRN4 (ENSPMJG00000000075) FERMT1 (ENSPMJG00000000091) BMP2 (ENSPMJG00000000169) HAO1 (ENSPMJG00000000202) TMX4 (ENSPMJG00000000209) PLCB1 (ENSPMJG00000000324) PLCB4 (ENSPMJG00000000495) Neognathae_c ANCESTRAL SPECIES 35 ENSGT00940000155564 ENSGT00940000156568 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.c.a #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a ENSGT00940000160301 ENSGT00940000155428 ENSGT00940000156426 Kakapo MODERN SPECIES 23 EML6 (ENSSHBG00005003283) RTN4 (ENSSHBG00005003227) ENSSHBG00005003206 MTIF2 (ENSSHBG00005003200) ENSSHBG00005003192 CCDC88A (ENSSHBG00005003093) CFAP36 (ENSSHBG00005003041) ENSSHBG00005003024 #7 PNPT1 (ENSSHBG00005003003) #8 EFEMP1 (ENSSHBG00005002989) #10 CCDC85A (ENSSHBG00005002961) #12 VRK2 (ENSSHBG00005002936) #15 FANCL (ENSSHBG00005002913) #17 BCL11A (ENSSHBG00005002890) #19 PAPOLG (ENSSHBG00005002870) #20 REL (ENSSHBG00005002848) #22 PUS10 (ENSSHBG00005002835) #24 PEX13 (ENSSHBG00005002814) #26 SANBR (ENSSHBG00005002786) #27 ENSSHBG00005002752 #29 XPO1 (ENSSHBG00005002738) #31 FAM161A (ENSSHBG00005002710) #35 CCT4 (ENSSHBG00005002687) #36 LRRN4 (ENSSHBG00005002673) FERMT1 (ENSSHBG00005002648) BMP2 (ENSSHBG00005000508) HAO1 (ENSSHBG00005000505) TMX4 (ENSSHBG00005015981) PLCB1 (ENSSHBG00005015973) PLCB4 (ENSSHBG00005015924) LAMP5 (ENSSHBG00005015899) Golden eagle MODERN SPECIES 24 RTN4 (ENSACCG00020005200) RPS27A (ENSACCG00020005182) MTIF2 (ENSACCG00020005173) ENSACCG00020005162 CCDC88A (ENSACCG00020005119) CFAP36 (ENSACCG00020005025) ENSACCG00020005011 #7 PNPT1 (ENSACCG00020004991) #8 EFEMP1 (ENSACCG00020004973) #10 CCDC85A (ENSACCG00020004961) #12 VRK2 (ENSACCG00020004949) #15 FANCL (ENSACCG00020004931) #17 BCL11A (ENSACCG00020004914) #19 ENSACCG00020004902 ENSACCG00020004851 #20 REL (ENSACCG00020004805) #22 PUS10 (ENSACCG00020004793) #24 PEX13 (ENSACCG00020008266) #26 SANBR (ENSACCG00020008247) #27 ENSACCG00020008223 #29 USP34 (ENSACCG00020007864) #30 XPO1 (ENSACCG00020007473) #31 FAM161A (ENSACCG00020007457) #35 CCT4 (ENSACCG00020007431) #36 LRRN4 (ENSACCG00020007417) FERMT1 (ENSACCG00020007397) BMP2 (ENSACCG00020007381) HAO1 (ENSACCG00020007367) TMX4 (ENSACCG00020007353) PLCB1 (ENSACCG00020007287) ENSACCG00020007251 African ostrich MODERN SPECIES 570 ENSSCUG00000011059 FLRT3 (ENSSCUG00000011061) MACROD2 (ENSSCUG00000011065) ENSSCUG00000011080 SNRPB2 (ENSSCUG00000011093) OTOR (ENSSCUG00000011095) PCSK2 (ENSSCUG00000011104) BFSP1 (ENSSCUG00000011117) ENSSCUG00000011118 CCDC85A (ENSSCUG00000011119) #12 VRK2 (ENSSCUG00000011123) #15 FANCL (ENSSCUG00000011125) #17 ENSSCUG00000011144 #19 PAPOLG (ENSSCUG00000011148) #20 REL (ENSSCUG00000011150) #22 ENSSCUG00000011153 #24 ENSSCUG00000011155 #24 PEX13 (ENSSCUG00000011156) #26 SANBR (ENSSCUG00000011159) #27 ENSSCUG00000011161 #29 USP34 (ENSSCUG00000011183) #30 XPO1 (ENSSCUG00000011211) #31 FAM161A (ENSSCUG00000011227) #35 CCT4 (ENSSCUG00000011231) #36 ENSSCUG00000011237 ENSSCUG00000011239 FERMT1 (ENSSCUG00000011241) BMP2 (ENSSCUG00000011252) HAO1 (ENSSCUG00000011268) TMX4 (ENSSCUG00000011271) Australian saltwater crocodile MODERN SPECIES 60 RTN4 (ENSCPRG00005013967) CLHC1 (ENSCPRG00005013963) RPS27A (ENSCPRG00005013955) MTIF2 (ENSCPRG00005013913) ENSCPRG00005013901 CCDC88A (ENSCPRG00005013865) CFAP36 (ENSCPRG00005013847) ENSCPRG00005013835 #7 PNPT1 (ENSCPRG00005013815) #8 EFEMP1 (ENSCPRG00005013804) #10 CCDC85A (ENSCPRG00005013778) #12 VRK2 (ENSCPRG00005013767) #15 FANCL (ENSCPRG00005013752) #17 BCL11A (ENSCPRG00005013718) #19 PAPOLG (ENSCPRG00005013702) #20 REL (ENSCPRG00005013695) #22 PUS10 (ENSCPRG00005013684) #24 PEX13 (ENSCPRG00005013679) #26 SANBR (ENSCPRG00005013668) #27 ENSCPRG00005013659 #29 USP34 (ENSCPRG00005013436) #30 XPO1 (ENSCPRG00005013231) #31 ENSCPRG00005013195 FAM161A (ENSCPRG00005013180) #35 CCT4 (ENSCPRG00005013168) #36 COMMD1 (ENSCPRG00005013164) #37 TMEM17 (ENSCPRG00005013145) EHBP1 (ENSCPRG00005013126) ENSCPRG00005013108 WDPCP (ENSCPRG00005013098) MDH1 (ENSCPRG00005013087) Cryptodira ANCESTRAL SPECIES 49 ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 Testudinoidea ANCESTRAL SPECIES ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344.b #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 Emydidae ANCESTRAL SPECIES 41 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00950000185057.B ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344.b #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 painted turtle MODERN SPECIES 2375 ENSCPBG00000026122 ENSCPBG00000026124 VRK2 (ENSCPBG00000026126) #15 FANCL (ENSCPBG00000026128) #17 ENSCPBG00000026130 BCL11A (ENSCPBG00000026142) #19 PAPOLG (ENSCPBG00000026150) #20 REL (ENSCPBG00000026152) #22 PUS10 (ENSCPBG00000026155) #24 PEX13 (ENSCPBG00000026158) #26 SANBR (ENSCPBG00000026159) #27 ENSCPBG00000026169 #29 ENSCPBG00000026170 #29 USP34 (ENSCPBG00000026178) #30 XPO1 (ENSCPBG00000026239) #31 FAM161A (ENSCPBG00000026249) #35 CCT4 (ENSCPBG00000026253) #36 SNRPB2 (ENSCPBG00000026255) OTOR (ENSCPBG00000026256) Three-toed box turtle MODERN SPECIES 62 CLHC1 (ENSTMTG00000017494) RPS27A (ENSTMTG00000017479) MTIF2 (ENSTMTG00000017461) CCDC88A (ENSTMTG00000014882) ENSTMTG00000014736 CFAP36 (ENSTMTG00000014715) ENSTMTG00000014685 #7 PNPT1 (ENSTMTG00000014598) #8 EFEMP1 (ENSTMTG00000014569) #10 CCDC85A (ENSTMTG00000014512) #12 VRK2 (ENSTMTG00000014267) #15 FANCL (ENSTMTG00000014230) #17 ENSTMTG00000014208 BCL11A (ENSTMTG00000014200) #19 PAPOLG (ENSTMTG00000014141) #20 REL (ENSTMTG00000014049) #22 PUS10 (ENSTMTG00000013983) #24 PEX13 (ENSTMTG00000013969) #26 SANBR (ENSTMTG00000013882) #27 ENSTMTG00000013867 #29 USP34 (ENSTMTG00000012814) #30 XPO1 (ENSTMTG00000012677) #31 FAM161A (ENSTMTG00000012663) #35 ENSTMTG00000012654 CCT4 (ENSTMTG00000012621) #36 SNRPB2 (ENSTMTG00000012597) OTOR (ENSTMTG00000012579) PCSK2 (ENSTMTG00000012469) BFSP1 (ENSTMTG00000012375) ENSTMTG00000012352 ENSTMTG00000012328 Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178.c #27 ENSGT00940000157344.a #29 ENSGT00390000008178.d #27 ENSGT00940000157344.b #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005001946 ENSGEVG00005001964 ENSGEVG00005001977 ENSGEVG00005002006 ENSGEVG00005002037 CCDC88A (ENSGEVG00005002288) CFAP36 (ENSGEVG00005002807) ENSGEVG00005002841 #7 PNPT1 (ENSGEVG00005002898) #8 EFEMP1 (ENSGEVG00005002929) #10 CCDC85A (ENSGEVG00005002960) #12 VRK2 (ENSGEVG00005002982) #15 FANCL (ENSGEVG00005003009) #17 BCL11A (ENSGEVG00005003042) #19 PAPOLG (ENSGEVG00005003061) #20 REL (ENSGEVG00005003074) #22 PUS10 (ENSGEVG00005003095) #24 PEX13 (ENSGEVG00005003121) #26 ENSGEVG00005003127 #27 ENSGEVG00005003145 #27 ENSGEVG00005003166 #29 USP34 (ENSGEVG00005003276) #30 ENSGEVG00005003515 XPO1 (ENSGEVG00005003539) #31 FAM161A (ENSGEVG00005003560) #35 CCT4 (ENSGEVG00005003573) #36 SNRPB2 (ENSGEVG00005003591) OTOR (ENSGEVG00005003604) PCSK2 (ENSGEVG00005003616) BFSP1 (ENSGEVG00005003651) ENSGEVG00005003685 Abingdon island giant tortoise MODERN SPECIES 2576 ENSCABG00000006659 #19 PAPOLG (ENSCABG00000006660) #20 ENSCABG00000006661 REL (ENSCABG00000006662) #22 PUS10 (ENSCABG00000006676) #24 PEX13 (ENSCABG00000006693) #26 SANBR (ENSCABG00000006696) #27 ENSCABG00000006734 #29 Chinese turtle MODERN SPECIES 1011 RPS27A (ENSPSIG00000012727) MTIF2 (ENSPSIG00000012738) CCDC88A (ENSPSIG00000012810) ENSPSIG00000013017 ENSPSIG00000013025 ENSPSIG00000013034 #7 PNPT1 (ENSPSIG00000013120) #8 EFEMP1 (ENSPSIG00000013324) #10 CCDC85A (ENSPSIG00000013466) #12 ENSPSIG00000013487 VRK2 (ENSPSIG00000013499) #15 FANCL (ENSPSIG00000013510) #17 ENSPSIG00000001863 BCL11A (ENSPSIG00000013644) #19 PAPOLG (ENSPSIG00000013663) #20 REL (ENSPSIG00000013860) #22 PUS10 (ENSPSIG00000013924) #24 PEX13 (ENSPSIG00000014046) #26 SANBR (ENSPSIG00000014050) #27 ENSPSIG00000014058 #29 USP34 (ENSPSIG00000014068) #30 XPO1 (ENSPSIG00000014457) #31 FAM161A (ENSPSIG00000014573) #35 CCT4 (ENSPSIG00000014582) #36 SNRPB2 (ENSPSIG00000014724) OTOR (ENSPSIG00000014783) Lepidosauria ANCESTRAL SPECIES ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000157344 #29 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 Episquamata ANCESTRAL SPECIES ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00990000211423 ENSGT01050000246300 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159097.c ENSGT00390000014037 Toxicofera ANCESTRAL SPECIES ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00990000211423 ENSGT01050000246300 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159097.c ENSGT00390000014037 Elapidae ANCESTRAL SPECIES ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00960000190579 ENSGT01050000246300 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349.b ENSGT00940000159864 ENSGT00940000159097.c ENSGT00390000014037 Indian cobra DUPLICATION Indian cobra MODERN SPECIES ENSNNAG00000002839 CLHC1 (ENSNNAG00000002825) RPS27A (ENSNNAG00000002816) MTIF2 (ENSNNAG00000002775) ENSNNAG00000002759 CCDC88A (ENSNNAG00000002738) CFAP36 (ENSNNAG00000002728) ENSNNAG00000002696 #7 PNPT1 (ENSNNAG00000002669) #8 EFEMP1 (ENSNNAG00000002658) #10 CCDC85A (ENSNNAG00000002643) #12 VRK2 (ENSNNAG00000002625) #15 FANCL (ENSNNAG00000002617) #17 ENSNNAG00000002607 #19 PAPOLG (ENSNNAG00000002579) #20 ENSNNAG00000002553 #22 ENSNNAG00000002541 #22 PUS10 (ENSNNAG00000002496) #24 PEX13 (ENSNNAG00000002484) #26 SANBR (ENSNNAG00000002474) #27 USP34 (ENSNNAG00000001951) #30 XPO1 (ENSNNAG00000001820) #31 ENSNNAG00000001811 ENSNNAG00000001804 ENSNNAG00000001794 ENSNNAG00000001789 CTSB (ENSNNAG00000001771) FDFT1 (ENSNNAG00000001754) NEIL2 (ENSNNAG00000001739) GATA4 (ENSNNAG00000001728) BLK (ENSNNAG00000001709) Indian cobra MODERN SPECIES CLHC1 (ENSNNAG00000002825) RPS27A (ENSNNAG00000002816) MTIF2 (ENSNNAG00000002775) ENSNNAG00000002759 CCDC88A (ENSNNAG00000002738) CFAP36 (ENSNNAG00000002728) ENSNNAG00000002696 #7 PNPT1 (ENSNNAG00000002669) #8 EFEMP1 (ENSNNAG00000002658) #10 CCDC85A (ENSNNAG00000002643) #12 VRK2 (ENSNNAG00000002625) #15 FANCL (ENSNNAG00000002617) #17 ENSNNAG00000002607 #19 PAPOLG (ENSNNAG00000002579) #20 ENSNNAG00000002553 #22 ENSNNAG00000002541 #22 PUS10 (ENSNNAG00000002496) #24 PEX13 (ENSNNAG00000002484) #26 SANBR (ENSNNAG00000002474) #27 USP34 (ENSNNAG00000001951) #30 XPO1 (ENSNNAG00000001820) #31 ENSNNAG00000001811 ENSNNAG00000001804 ENSNNAG00000001794 ENSNNAG00000001789 CTSB (ENSNNAG00000001771) FDFT1 (ENSNNAG00000001754) NEIL2 (ENSNNAG00000001739) GATA4 (ENSNNAG00000001728) BLK (ENSNNAG00000001709) FAM167A (ENSNNAG00000001698) Elapidae_a ANCESTRAL SPECIES 2 ENSGT00940000165870 ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 Acanthophiinae ANCESTRAL SPECIES 3 ENSGT00940000165870 ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000179750 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT01030000236025 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 Eastern brown snake MODERN SPECIES 5 ENSPTXG00000008386 CLHC1 (ENSPTXG00000008387) ENSPTXG00000008388 MTIF2 (ENSPTXG00000008389) ENSPTXG00000008391 CCDC88A (ENSPTXG00000008398) CFAP36 (ENSPTXG00000008734) ENSPTXG00000008735 #7 PNPT1 (ENSPTXG00000008740) #8 EFEMP1 (ENSPTXG00000009396) #10 CCDC85A (ENSPTXG00000009398) #12 VRK2 (ENSPTXG00000009399) #15 FANCL (ENSPTXG00000009400) #17 ENSPTXG00000009402 #19 PAPOLG (ENSPTXG00000009404) #20 REL (ENSPTXG00000009405) #22 PUS10 (ENSPTXG00000009406) #24 PEX13 (ENSPTXG00000009407) #26 ENSPTXG00000009408 #27 USP34 (ENSPTXG00000009409) #30 XPO1 (ENSPTXG00000009410) #31 Mainland tiger snake MODERN SPECIES 85 MTIF2 (ENSNSUG00000015376) ENSNSUG00000015377 CCDC88A (ENSNSUG00000015378) ENSNSUG00000015379 CFAP36 (ENSNSUG00000015380) ENSNSUG00000015384 #7 PNPT1 (ENSNSUG00000015422) #8 EFEMP1 (ENSNSUG00000015645) #10 ENSNSUG00000015655 CCDC85A (ENSNSUG00000015658) #12 ENSNSUG00000015660 VRK2 (ENSNSUG00000015661) #15 FANCL (ENSNSUG00000015662) #17 ENSNSUG00000015665 #19 PAPOLG (ENSNSUG00000015668) #20 REL (ENSNSUG00000015671) #22 ENSNSUG00000015682 #24 ENSNSUG00000015683 PEX13 (ENSNSUG00000015684) #26 SANBR (ENSNSUG00000015686) #27 USP34 (ENSNSUG00000015689) #30 XPO1 (ENSNSUG00000015814) #31 Blue-lipped sea krait MODERN SPECIES 8634 ENSLLTG00000005449 #22 Lizard MODERN SPECIES 1135 REL (ENSACAG00000003030) #22 PUS10 (ENSACAG00000002947) #24 PEX13 (ENSACAG00000002926) #26 SANBR (ENSACAG00000002834) #27 ENSACAG00000028963 USP34 (ENSACAG00000002606) #30 XPO1 (ENSACAG00000002501) #31 ENSACAG00000037193 Laterata ANCESTRAL SPECIES 4 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00990000211423 ENSGT01050000246300 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159097.d ENSGT00940000159097.c ENSGT00390000014037 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 11 ENSPMRG00000002504 CCDC88A (ENSPMRG00000002867) ENSPMRG00000004244 CFAP36 (ENSPMRG00000004247) ENSPMRG00000004261 #7 PNPT1 (ENSPMRG00000004382) #8 ENSPMRG00000004843 EFEMP1 (ENSPMRG00000004850) #10 CCDC85A (ENSPMRG00000004865) #12 VRK2 (ENSPMRG00000004881) #15 FANCL (ENSPMRG00000004896) #17 BCL11A (ENSPMRG00000004920) #19 PAPOLG (ENSPMRG00000004932) #20 ENSPMRG00000004937 ENSPMRG00000004943 #22 ENSPMRG00000004950 #22 PUS10 (ENSPMRG00000004971) #24 PEX13 (ENSPMRG00000005019) #26 SANBR (ENSPMRG00000005027) #27 ENSPMRG00000005052 USP34 (ENSPMRG00000005148) #30 XPO1 (ENSPMRG00000005679) #31 ENSPMRG00000005694 ENSPMRG00000005704 ENSPMRG00000005712 ENSPMRG00000005716 ENSPMRG00000005721 ENSPMRG00000005733 ENSPMRG00000005742 ENSPMRG00000005748 ENSPMRG00000005759 Common wall lizard MODERN SPECIES 11 MTIF2 (ENSPMRG00000002459) ENSPMRG00000002504 CCDC88A (ENSPMRG00000002867) ENSPMRG00000004244 CFAP36 (ENSPMRG00000004247) ENSPMRG00000004261 #7 PNPT1 (ENSPMRG00000004382) #8 ENSPMRG00000004843 EFEMP1 (ENSPMRG00000004850) #10 CCDC85A (ENSPMRG00000004865) #12 VRK2 (ENSPMRG00000004881) #15 FANCL (ENSPMRG00000004896) #17 BCL11A (ENSPMRG00000004920) #19 PAPOLG (ENSPMRG00000004932) #20 ENSPMRG00000004937 ENSPMRG00000004943 #22 ENSPMRG00000004950 #22 PUS10 (ENSPMRG00000004971) #24 PEX13 (ENSPMRG00000005019) #26 SANBR (ENSPMRG00000005027) #27 ENSPMRG00000005052 USP34 (ENSPMRG00000005148) #30 XPO1 (ENSPMRG00000005679) #31 ENSPMRG00000005694 ENSPMRG00000005704 ENSPMRG00000005712 ENSPMRG00000005716 ENSPMRG00000005721 ENSPMRG00000005733 ENSPMRG00000005742 ENSPMRG00000005748 Argentine black and white tegu MODERN SPECIES 7 MTIF2 (ENSSMRG00000014760) ENSSMRG00000014758 CCDC88A (ENSSMRG00000014757) CFAP36 (ENSSMRG00000014756) ENSSMRG00000014755 #7 PNPT1 (ENSSMRG00000014754) #8 EFEMP1 (ENSSMRG00000014753) #10 CCDC85A (ENSSMRG00000014750) #12 ENSSMRG00000014749 VRK2 (ENSSMRG00000014748) #15 FANCL (ENSSMRG00000014747) #17 ENSSMRG00000014742 #19 ENSSMRG00000014741 #19 ENSSMRG00000014703 #20 ENSSMRG00000014701 #20 REL (ENSSMRG00000014695) #22 PUS10 (ENSSMRG00000014691) #24 PEX13 (ENSSMRG00000014690) #26 SANBR (ENSSMRG00000014681) #27 USP34 (ENSSMRG00000014173) #30 XPO1 (ENSSMRG00000013644) #31 ENSSMRG00000013643 ENSSMRG00000013642 ENSSMRG00000013641 ENSSMRG00000013640 ENSSMRG00000013638 tuatara MODERN SPECIES 1669 BCL11A (ENSSPUG00000007479) #19 PAPOLG (ENSSPUG00000007491) #20 REL (ENSSPUG00000007514) #22 PUS10 (ENSSPUG00000007530) #24 PEX13 (ENSSPUG00000007550) #26 SANBR (ENSSPUG00000007563) #27 ENSSPUG00000007593 #29 USP34 (ENSSPUG00000007844) #30 XPO1 (ENSSPUG00000009057) #31 Anura ANCESTRAL SPECIES 16 ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000157361 #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ENSGT00390000000583 Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000016621 FOXA2 (ENSLLEG00000016660) ENSLLEG00000016780 #7 PNPT1 (ENSLLEG00000017678) #8 EFEMP1 (ENSLLEG00000018149) #10 CCDC85A (ENSLLEG00000018345) #12 ENSLLEG00000018431 VRK2 (ENSLLEG00000018470) #15 FANCL (ENSLLEG00000005345) #17 ENSLLEG00000005385 ENSLLEG00000005411 BCL11A (ENSLLEG00000005447) #19 ENSLLEG00000005603 ENSLLEG00000005610 PAPOLG (ENSLLEG00000005624) #20 REL (ENSLLEG00000005742) #22 PUS10 (ENSLLEG00000005786) #24 ENSLLEG00000005875 SANBR (ENSLLEG00000005906) #27 USP34 (ENSLLEG00000006009) #30 XPO1 (ENSLLEG00000006444) #31 ENSLLEG00000006618 FAM161A (ENSLLEG00000006638) #35 ENSLLEG00000006686 CCT4 (ENSLLEG00000006712) #36 COMMD1 (ENSLLEG00000006880) #37 ENSLLEG00000006902 B3GNT2 (ENSLLEG00000006916) EHBP1 (ENSLLEG00000006950) ENSLLEG00000007289 OTX1 (ENSLLEG00000007304) Frog MODERN SPECIES 5 pax1 (ENSXETG00000023497) ENSXETG00000049453 foxa2 (ENSXETG00000026998) cfap36 (ENSXETG00000006071) ppp4r3b (ENSXETG00000006072) #7 dusp16 (ENSXETG00000006075) #8 efemp1 (ENSXETG00000006076) #10 CCDC85A (ENSXETG00000006078) #12 vrk2 (ENSXETG00000020477) #15 fancl (ENSXETG00000020481) #17 ENSXETG00000020482 ENSXETG00000043268 bcl11a (ENSXETG00000002206) #19 papolg (ENSXETG00000002208) #20 ENSXETG00000047660 rel (ENSXETG00000002209) #22 ENSXETG00000048162 pus10 (ENSXETG00000002210) #24 pex13 (ENSXETG00000002212) #26 sanbr (ENSXETG00000002217) #27 usp34 (ENSXETG00000002218) #30 xpo1 (ENSXETG00000002224) #31 fam161a (ENSXETG00000002233) #35 cct4 (ENSXETG00000002227) #36 commd1 (ENSXETG00000002235) #37 b3gnt2 (ENSXETG00000002237) ehbp1 (ENSXETG00000013029) otx1 (ENSXETG00000040503) wdpcp (ENSXETG00000013020) mdh1 (ENSXETG00000013016) ugp2 (ENSXETG00000013007) Coelacanth MODERN SPECIES 1863 PAPOLG (ENSLACG00000009543) #20 REL (ENSLACG00000008544) #22 PUS10 (ENSLACG00000007243) #24 ENSLACG00000007005 SANBR (ENSLACG00000005293) #27 ENSLACG00000002660 ENSLACG00000000112 Actinopterygii ANCESTRAL SPECIES 19 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00940000157820.a.b ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b #7 ENSGT00390000014001 #8 ENSGT00940000157837 #10 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ENSGT00390000000583 Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000155933.b.b ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT01050000244827.E ENSGT00950000183029.B ENSGT00940000166291 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000163878 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B Osteoglossocephalai ANCESTRAL SPECIES 92 ENSGT01050000244827.E ENSGT00950000183029.B.j ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683 ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000170402 ENSGT00940000157361.b #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000007529 #24 ENSGT00390000016883 #26 ENSGT00390000008178 #27 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 94 ENSGT00390000006243 ENSGT00940000155884.a.a ENSGT00940000155134.z ENSGT00940000155933.b.b ENSGT00940000155933.b.a ENSGT01050000244827.E.e.a ENSGT00950000183029.B.i.b ENSGT00940000166291.h ENSGT00940000154866.B.b ENSGT01030000234532.A.a.a.b.j.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00910000147025 ENSGT00940000156983.a.a.j #19 ENSGT00940000156467.o #20 ENSGT00940000158732.k #22 ENSGT00390000007529 #24 ENSGT00940000158659 #30 ENSGT00940000153408.B #31 ENSGT00940000157824 #35 ENSGT00940000178862 ENSGT00550000074956 #36 ENSGT00390000012029 #37 ENSGT00940000155345.p ENSGT01100000263601 ENSGT00940000161234.f ENSGT00530000063410.a ENSGT00940000153464.B.z.a.a ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.b.a ENSGT00940000155337.`b.a Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 19 asrgl1 (ENSSFOG00015012313) ENSSFOG00015012291 ENSSFOG00015003071 ddx43 (ENSSFOG00015012193) CGAS (ENSSFOG00015012161) EEF1A1 (ENSSFOG00015012136) slc17a5 (ENSSFOG00015012119) ENSSFOG00015029442 ENSSFOG00015012058 ENSSFOG00015030330 ENSSFOG00015012043 #12 vrk2 (ENSSFOG00015011998) #15 fancl (ENSSFOG00015011964) #17 bcl11aa (ENSSFOG00015026685) #19 papolg (ENSSFOG00015011874) #20 rel (ENSSFOG00015011855) #22 pex13 (ENSSFOG00015026130) #26 SANBR (ENSSFOG00015011799) #27 ENSSFOG00015011598 #31 B3GNT2 (ENSSFOG00015024343) EHBP1 (ENSSFOG00015011508) otx1 (ENSSFOG00015011487) WDPCP (ENSSFOG00015027973) MDH1 (ENSSFOG00015011431) ugp2a (ENSSFOG00015011405) ENSSFOG00015032922 ENSSFOG00015011260 lgalsla (ENSSFOG00015028463) ENSSFOG00015027086 ENSSFOG00015011233 ENSSFOG00015028900 Asian bonytongue MODERN SPECIES 7 RIMS1 (ENSSFOG00015003186) KCNQ5 (ENSSFOG00015031464) CGAS (ENSSFOG00015003054) eef1a1a (ENSSFOG00015003033) ENSSFOG00015002983 RIN2 (ENSSFOG00015002933) ENSSFOG00015002919 ENSSFOG00015002819 dtd1 (ENSSFOG00015002797) sec23b (ENSSFOG00015002716) ccdc85al (ENSSFOG00015028476) #12 ENSSFOG00015002560 bcl11aa (ENSSFOG00015031714) #19 ENSSFOG00015002513 papolg (ENSSFOG00015002383) #20 rel (ENSSFOG00015002336) #22 pus10 (ENSSFOG00015002234) #24 USP34 (ENSSFOG00015001953) #30 XPO1 (ENSSFOG00015001881) #31 ENSSFOG00015029812 #35 ENSSFOG00015001847 cct4 (ENSSFOG00015001765) #36 commd1 (ENSSFOG00015001751) #37 B3GNT2 (ENSSFOG00015001747) ENSSFOG00015001741 OTX1 (ENSSFOG00015001725) MDH1 (ENSSFOG00015001676) ugp2a (ENSSFOG00015001656) vps54 (ENSSFOG00015001545) ENSSFOG00015031456 lgalsla (ENSSFOG00015001472) P. kingsleyae MODERN SPECIES 21 rpl23 (ENSPKIG00000007151) cwc25 (ENSPKIG00000007116) RIMS1 (ENSPKIG00000006743) ENSPKIG00000006640 ENSPKIG00000006606 CGAS (ENSPKIG00000006564) ENSPKIG00000006539 RIN2 (ENSPKIG00000006500) SLC24A3 (ENSPKIG00000006390) dtd1 (ENSPKIG00000006316) sec23b (ENSPKIG00000006239) ccdc85al (ENSPKIG00000006178) #12 ENSPKIG00000006131 bcl11aa (ENSPKIG00000006097) #19 papolg (ENSPKIG00000006027) #20 rel (ENSPKIG00000005982) #22 pus10 (ENSPKIG00000005909) #24 USP34 (ENSPKIG00000005774) #30 XPO1 (ENSPKIG00000005688) #31 FAM161A (ENSPKIG00000005663) #35 cct4 (ENSPKIG00000005618) #36 commd1 (ENSPKIG00000005530) #37 B3GNT2 (ENSPKIG00000005518) ENSPKIG00000005498 OTX1 (ENSPKIG00000005463) MDH1 (ENSPKIG00000005390) ugp2a (ENSPKIG00000005328) vps54 (ENSPKIG00000005241) ENSPKIG00000005190 lgalsla (ENSPKIG00000005170) ENSPKIG00000005147 Osteoglossiformes ANCESTRAL SPECIES 115 ENSGT01050000244827.E.e.b ENSGT00950000183029.B.i.a ENSGT00940000166291.g ENSGT00940000154866.B.a ENSGT00940000166683 ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000179750 ENSGT00940000170402 ENSGT00940000157361.b #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.i #19 ENSGT00940000156467.n #20 ENSGT00940000158732.l #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000155345.o ENSGT00940000157597 ENSGT00940000161234.e ENSGT00390000016551 ENSGT00950000183050.b.b.b.a.a.b.b ENSGT00940000166587 ENSGT00940000155337.`b.b ENSGT00940000154186.a.q ENSGT00530000063867.b ENSGT00940000157081.h ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000154556.e.b P. kingsleyae MODERN SPECIES 11 asrgl1 (ENSPKIG00000002669) RIMS1 (ENSPKIG00000002723) ENSPKIG00000002858 ddx43 (ENSPKIG00000002941) eef1a1b (ENSPKIG00000002973) slc17a5 (ENSPKIG00000002993) RIN2 (ENSPKIG00000003022) ENSPKIG00000003049 SLC24A3 (ENSPKIG00000003070) soul2 (ENSPKIG00000003106) ccdc85a (ENSPKIG00000003135) #12 ENSPKIG00000003162 fancl (ENSPKIG00000003202) #17 bcl11aa (ENSPKIG00000003260) #19 papolg (ENSPKIG00000003313) #20 ENSPKIG00000003400 #22 pex13 (ENSPKIG00000003409) #26 SANBR (ENSPKIG00000003437) #27 ENSPKIG00000003545 #31 ENSPKIG00000003715 B3GNT2 (ENSPKIG00000003847) EHBP1 (ENSPKIG00000004032) otx1 (ENSPKIG00000004281) WDPCP (ENSPKIG00000004302) mdh1ab (ENSPKIG00000004347) ugp2b (ENSPKIG00000004404) ENSPKIG00000004483 ENSPKIG00000004509 LGALSL (ENSPKIG00000004562) ENSPKIG00000004596 ENSPKIG00000004619 Clupeocephala ANCESTRAL SPECIES 141 ENSGT00950000183029.B.j ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.b ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000170402 ENSGT00940000157361.b #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00910000147025 ENSGT00940000156983.a.a #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.r ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a Euteleosteomorpha ANCESTRAL SPECIES 207 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q Protacanthopterygii ANCESTRAL SPECIES 4 ENSGT00940000165449 ENSGT00940000157373.l ENSGT00390000007551 ENSGT00940000154445.a ENSGT00390000004284.e ENSGT00940000156530.c.ab ENSGT00390000018052 ENSGT00950000183091.A.b ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000157509.a.f ENSGT00940000156327.l.o ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a.b #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234.c ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 Salmoninae ANCESTRAL SPECIES 617 ENSGT00390000009597.c ENSGT00940000157509.a.f ENSGT00940000156327.l.o.b ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000156467 #20 ENSGT00940000163917.a.b.c.b ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.t #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q ENSGT00940000153408.B.s.a.b #31 ENSGT00970000194185.C Salmoninae_a ANCESTRAL SPECIES 100 ENSGT00940000156150.x ENSGT00940000177206 ENSGT00940000160250 ENSGT00940000157412.a.b.d ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00390000009597.c ENSGT00940000157509.a.f ENSGT00940000156327.l.o.b ENSGT00940000156841.a.a ENSGT00940000154556.b ENSGT00940000154556.a.b.a ENSGT00940000156467 #20 ENSGT00940000163917.a.b.c.b ENSGT00390000000113.A.a.b ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.t #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q Salmo ANCESTRAL SPECIES 231 ENSGT00940000154556.a.b.a ENSGT00940000156467 #20 ENSGT00940000163917.a.b.c.b ENSGT00390000000113.A.a.b ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178.s #27 ENSGT00940000155345.q ENSGT00390000008178.t #27 ENSGT00940000153408.B.s.a.b #31 ENSGT00970000194185.C Atlantic salmon MODERN SPECIES 1098 ENSSSAG00000111590 ENSSSAG00000015638 ENSSSAG00000094331 ENSSSAG00000072049 ENSSSAG00000072128 #20 ENSSSAG00000119631 ENSSSAG00000072037 REL (ENSSSAG00000102030) #22 SANBR (ENSSSAG00000117472) #27 ENSSSAG00000057312 #31 ENSSSAG00000020249 #31 ENSSSAG00000099028 ENSSSAG00000044004 ENSSSAG00000086437 ENSSSAG00000117895 ENSSSAG00000049572 River trout MODERN SPECIES 9 scd (ENSSTUG00000013741) SEC31B (ENSSTUG00000013789) ENSSTUG00000014648 ndufb8 (ENSSTUG00000014651) gpx9 (ENSSTUG00000014667) ENSSTUG00000014677 fbxl15 (ENSSTUG00000014692) ENSSTUG00000014710 ENSSTUG00000014712 ENSSTUG00000014728 ENSSTUG00000014744 SPRED2 (ENSSTUG00000014753) ENSSTUG00000014761 papolg (ENSSTUG00000014941) #20 ENSSTUG00000018261 rel (ENSSTUG00000018274) #22 pex13 (ENSSTUG00000018324) #26 SANBR (ENSSTUG00000018341) #27 XPO1 (ENSSTUG00000018409) #31 ENSSTUG00000018565 ENSSTUG00000018570 ENSSTUG00000018582 MDH1 (ENSSTUG00000018603) ugp2b (ENSSTUG00000018863) ENSSTUG00000019490 ENSSTUG00000019497 peli1b (ENSSTUG00000019507) ENSSTUG00000019570 ENSSTUG00000019682 lgalslb (ENSSTUG00000019685) ENSSTUG00000019694 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 126 ENSGT00940000158732.m #22 ENSGT00390000009597.c ENSGT00940000157509.a.f ENSGT00940000156327.l.o.b ENSGT00940000156841.a.a ENSGT00940000154556.b.a ENSGT00940000156467 #20 ENSGT00940000163917.a.b.c.b ENSGT00390000000113.A.a.b ENSGT00940000158732.n #22 ENSGT00390000016883.c #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a.b #31 ENSGT00970000194185.C ENSGT00940000165604 ENSGT00940000157824.i.b #35 Oncorhynchus_a ANCESTRAL SPECIES 269 ENSGT00940000158732.m #22 ENSGT00390000016883.c #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a.b #31 ENSGT00970000194185.C ENSGT00940000165604 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q Chinook salmon MODERN SPECIES 904 ENSOTSG00005015535 #22 pex13 (ENSOTSG00005015513) #26 ENSOTSG00005015511 XPO1 (ENSOTSG00005015509) #31 Coho salmon MODERN SPECIES 586 ENSOKIG00005036222 #22 PEX13 (ENSOKIG00005036282) #26 ENSOKIG00005036295 Rainbow trout MODERN SPECIES 15 INSYN2A (ENSOMYG00000055079) ENSOMYG00000059389 dock1 (ENSOMYG00000065093) foxi1 (ENSOMYG00000024914) CLRN3 (ENSOMYG00000076734) PTPRE (ENSOMYG00000035941) ENSOMYG00000075550 ENSOMYG00000048837 ENSOMYG00000069772 ebf3a (ENSOMYG00000050048) ENSOMYG00000077783 ENSOMYG00000076967 ENSOMYG00000053535 ENSOMYG00000063787 #20 ENSOMYG00000072111 REL (ENSOMYG00000044569) #22 ENSOMYG00000031437 ENSOMYG00000062826 #27 ENSOMYG00000057812 #31 ENSOMYG00000050818 ENSOMYG00000055109 ENSOMYG00000062049 ENSOMYG00000056805 ENSOMYG00000065124 ENSOMYG00000066187 ENSOMYG00000056812 ENSOMYG00000059380 ENSOMYG00000048975 ENSOMYG00000046661 ENSOMYG00000029392 ENSOMYG00000077291 Oncorhynchus ANCESTRAL SPECIES 126 ENSGT00940000158732.m #22 ENSGT00390000009597.c ENSGT00940000157509.a.f ENSGT00940000156327.l.o.b ENSGT00940000156841.a.a ENSGT00940000154556.b.a ENSGT00940000156467 #20 ENSGT00940000163917.a.b.c.b ENSGT00390000000113.A.a.b ENSGT00940000158732.n #22 ENSGT00390000016883.c #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a.b #31 ENSGT00970000194185.C ENSGT00940000165604 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q Rainbow trout MODERN SPECIES ENSOMYG00000000408 ENSOMYG00000000400 ENSOMYG00000000370 ENSOMYG00000044517 ENSOMYG00000060095 ENSOMYG00000035563 ghitm (ENSOMYG00000035557) ENSOMYG00000041655 ENSOMYG00000070624 ENSOMYG00000048884 ENSOMYG00000077490 ENSOMYG00000075413 ENSOMYG00000000126 #20 ENSOMYG00000069566 ENSOMYG00000044586 REL (ENSOMYG00000074570) #22 pex13 (ENSOMYG00000000604) #26 SANBR (ENSOMYG00000067508) #27 XPO1 (ENSOMYG00000062205) #31 ENSOMYG00000048298 ENSOMYG00000052214 ENSOMYG00000000177 ENSOMYG00000000233 #35 ENSOMYG00000000191 b3gnt2b (ENSOMYG00000053328) ENSOMYG00000071947 ENSOMYG00000059374 ENSOMYG00000070464 ENSOMYG00000068195 ENSOMYG00000051099 ENSOMYG00000070137 Oncorhynchus_a ANCESTRAL SPECIES 361 ENSGT00940000154556.a.b.a ENSGT00940000156467 #20 ENSGT00940000163917.a.b.c.b ENSGT00390000000113.A.a.b ENSGT00940000158732.n #22 Coho salmon MODERN SPECIES 33 fbxl15 (ENSOKIG00005044063) PAX2 (ENSOKIG00005044002) ENSOKIG00005043987 ENSOKIG00005043974 ENSOKIG00005043966 ENSOKIG00005043939 ENSOKIG00005043930 ENSOKIG00005043925 GHITM (ENSOKIG00005043909) CHST3 (ENSOKIG00005043901) SPRED2 (ENSOKIG00005043896) ENSOKIG00005043475 papolg (ENSOKIG00005039901) #20 ENSOKIG00005039783 ENSOKIG00005039740 REL (ENSOKIG00005039724) #22 pex13 (ENSOKIG00005039709) #26 SANBR (ENSOKIG00005039657) #27 ENSOKIG00005039218 #31 ENSOKIG00005039174 ENSOKIG00005039168 ENSOKIG00005039155 #35 b3gnt2b (ENSOKIG00005039138) ENSOKIG00005046392 otx1 (ENSOKIG00005046385) ENSOKIG00005046266 MDH1 (ENSOKIG00005045989) UGP2 (ENSOKIG00005045840) ENSOKIG00005045806 ENSOKIG00005045728 ENSOKIG00005045719 Huchen DUPLICATION Huchen MODERN SPECIES 3965 rel (ENSHHUG00000049274) #22 pex13 (ENSHHUG00000049268) #26 ENSHHUG00000049267 ENSHHUG00000049257 #27 ENSHHUG00000049250 #27 XPO1 (ENSHHUG00000049217) #31 ENSHHUG00000049215 ENSHHUG00000049212 Huchen MODERN SPECIES 10699 ENSHHUG00000016172 #22 Northern pike MODERN SPECIES 4 ENSELUG00000015188 cisd1 (ENSELUG00000015140) cnrip1b (ENSELUG00000015120) dnaaf10 (ENSELUG00000015074) pno1 (ENSELUG00000014887) C1D (ENSELUG00000014823) ENSELUG00000014800 ENSELUG00000014766 ENSELUG00000014739 ENSELUG00000031773 SPRED2 (ENSELUG00000014634) ACTR2 (ENSELUG00000014576) papolg (ENSELUG00000014497) #20 ENSELUG00000014470 ENSELUG00000001419 rel (ENSELUG00000014377) #22 pex13 (ENSELUG00000014334) #26 SANBR (ENSELUG00000014318) #27 XPO1 (ENSELUG00000014306) #31 b3gnt2b (ENSELUG00000014198) EHBP1 (ENSELUG00000014117) WDPCP (ENSELUG00000013884) otx1 (ENSELUG00000013906) ENSELUG00000030195 MDH1 (ENSELUG00000013840) ENSELUG00000032007 ugp2b (ENSELUG00000013792) ENSELUG00000029570 ENSELUG00000013758 peli1b (ENSELUG00000013744) ENSELUG00000013717 Acanthomorphata ANCESTRAL SPECIES 45 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000170402 ENSGT00940000157361.b #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.b ##19 ENSGT00940000155134.y ENSGT00950000183045.A.a.a ENSGT00390000018730.B Cod MODERN SPECIES 6 ENSGMOG00000006867 TTC7A (ENSGMOG00000029809) ENSGMOG00000023737 calm2a (ENSGMOG00000035072) ENSGMOG00000006917 epcam (ENSGMOG00000006927) PLEKHH2 (ENSGMOG00000006939) THADA (ENSGMOG00000006981) ZFP36L2 (ENSGMOG00000029927) haao (ENSGMOG00000034156) haao (ENSGMOG00000018752) ENSGMOG00000026027 ENSGMOG00000020299 OXER1 (ENSGMOG00000018757) PAPOLG (ENSGMOG00000018772) #20 ENSGMOG00000018800 #22 PEX13 (ENSGMOG00000019037) #26 ENSGMOG00000035432 SANBR (ENSGMOG00000019047) #27 ENSGMOG00000019063 #31 ENSGMOG00000013204 ENSGMOG00000013190 soul2 (ENSGMOG00000036506) CCDC85A (ENSGMOG00000033411) #12 vrk2 (ENSGMOG00000002436) #15 fancl (ENSGMOG00000002410) #17 ENSGMOG00000025329 ##19 RIMS1 (ENSGMOG00000015757) asrgl1 (ENSGMOG00000017200) OGFRL1 (ENSGMOG00000031447) ENSGMOG00000035840 Euacanthomorphacea ANCESTRAL SPECIES 32 ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00940000164218 ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000155076.b.b ENSGT00390000013008 ENSGT00390000010899.a.b.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b #12 ENSGT00940000164978.b.c ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.b ##19 ENSGT00940000155134.y ENSGT00950000183045.A.a.a ENSGT00390000018730.B Pinecone sodierfish MODERN SPECIES 6 TTC7A (ENSMMDG00005021216) si:ch211-93n23.7 (ENSMMDG00005021220) calm2a (ENSMMDG00005021233) ENSMMDG00005008208 ENSMMDG00005008216 epcam (ENSMMDG00005008218) PLEKHH2 (ENSMMDG00005008226) THADA (ENSMMDG00005008252) zfp36l2 (ENSMMDG00005008368) ENSMMDG00005008372 ENSMMDG00005008378 haao (ENSMMDG00005008395) ENSMMDG00005008532 OXER1 (ENSMMDG00005008535) papolg (ENSMMDG00005008548) #20 REL (ENSMMDG00005008558) #22 pex13 (ENSMMDG00005008563) #26 SANBR (ENSMMDG00005008566) #27 XPO1 (ENSMMDG00005008572) #31 ENSMMDG00005008626 RIN2 (ENSMMDG00005008631) SLC24A3 (ENSMMDG00005008685) ENSMMDG00005008891 soul2 (ENSMMDG00005008893) CCDC85A (ENSMMDG00005008897) #12 zgc:175280 (ENSMMDG00005008900) vrk2 (ENSMMDG00005008903) #15 fancl (ENSMMDG00005008908) #17 ENSMMDG00005008954 ENSMMDG00005008956 ##19 ENSMMDG00005008959 ##19 Percomorphaceae ANCESTRAL SPECIES 30 ENSGT00940000164285.a ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000164218 ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Tiger tail seahorse MODERN SPECIES 312 haao (ENSHCOG00000006185) ENSHCOG00000006192 TTC7A (ENSHCOG00000006324) ENSHCOG00000006353 calm2a (ENSHCOG00000006363) ENSHCOG00000006387 ENSHCOG00000006399 ENSHCOG00000006422 epcam (ENSHCOG00000006436) epcam (ENSHCOG00000006442) PLEKHH2 (ENSHCOG00000006515) ENSHCOG00000006725 zfp36l2 (ENSHCOG00000006757) lhb (ENSHCOG00000006769) papolg (ENSHCOG00000006782) #20 REL (ENSHCOG00000006855) #22 pex13 (ENSHCOG00000006878) #26 SANBR (ENSHCOG00000006910) #27 XPO1 (ENSHCOG00000006949) #31 ENSHCOG00000006964 #31 pcgf6 (ENSHCOG00000007039) inaa (ENSHCOG00000007065) sertad2b (ENSHCOG00000007074) slc1a4 (ENSHCOG00000007093) smap1 (ENSHCOG00000007112) b3gat2 (ENSHCOG00000007129) OGFRL1 (ENSHCOG00000007156) asrgl1 (ENSHCOG00000007178) RIMS1 (ENSHCOG00000007388) ENSHCOG00000007423 ##19 fancl (ENSHCOG00000007556) #17 Percomorphaceae_B ANCESTRAL SPECIES 24 ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000164251 ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000164251 ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y.q ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Aplocheiloidei ANCESTRAL SPECIES 138 ENSGT00940000162292 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00730000110943.B.c ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000168731 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000158034 Mangrove rivulus MODERN SPECIES 391 ENSKMAG00000016512 haao (ENSKMAG00000016500) papolg (ENSKMAG00000016439) #20 REL (ENSKMAG00000016389) #22 polr2k (ENSKMAG00000016379) pex13 (ENSKMAG00000016368) #26 SANBR (ENSKMAG00000016337) #27 XPO1 (ENSKMAG00000016218) #31 fzd1 (ENSKMAG00000016171) Turquoise killifish MODERN SPECIES 1612 mcfd2 (ENSNFUG00015025296) TTC7A (ENSNFUG00015000187) ENSNFUG00015000216 ENSNFUG00015000225 calm2a (ENSNFUG00015000255) ENSNFUG00015000303 ENSNFUG00015000316 PLEKHH2 (ENSNFUG00015000328) ENSNFUG00015000385 ENSNFUG00015000472 ZFP36L2 (ENSNFUG00015000478) ENSNFUG00015000483 ENSNFUG00015000491 HAAO (ENSNFUG00015000503) PAPOLG (ENSNFUG00015000717) #20 REL (ENSNFUG00015000908) #22 PEX13 (ENSNFUG00015000916) SANBR (ENSNFUG00015000927) #27 XPO1B (ENSNFUG00015000944) #31 PCGF6 (ENSNFUG00015000970) polr1b (ENSNFUG00015000987) NANP (ENSNFUG00015001004) cyp1b1 (ENSNFUG00015001007) ENSNFUG00015001015 CDC42EP3 (ENSNFUG00015001023) ENSNFUG00015001026 zgc:175280 (ENSNFUG00015001044) RIN2 (ENSNFUG00015001140) cyp17a1 (ENSNFUG00015001215) ENSNFUG00015001372 NT5C2A (ENSNFUG00015001389) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y.q ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000164285.a ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y.q ENSGT00940000156983.a.b.f ##19 ENSGT00940000156983.a.b.e ##19 Poecilia ANCESTRAL SPECIES 11 ENSGT00940000164285.a ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000168731 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y.q ENSGT00940000156983.a.b.e ##19 ENSGT00390000005537 #17 NAME_6 ANCESTRAL SPECIES 79 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000168731 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y.q ENSGT00940000156983.a.b.e ##19 ENSGT00390000005537 #17 Sailfin molly MODERN SPECIES 489 ENSPLAG00000018514 ENSPLAG00000018496 haao (ENSPLAG00000018481) papolg (ENSPLAG00000018445) #20 REL (ENSPLAG00000018393) #22 ENSPLAG00000018381 SANBR (ENSPLAG00000018351) #27 XPO1 (ENSPLAG00000018279) #31 ENSPLAG00000018249 pcgf6 (ENSPLAG00000018219) inaa (ENSPLAG00000018208) sertad2b (ENSPLAG00000018186) Amazon molly MODERN SPECIES 656 zfp36l2 (ENSPFOG00000012844) ENSPFOG00000020901 ENSPFOG00000020902 haao (ENSPFOG00000012855) papolg (ENSPFOG00000012909) #20 ENSPFOG00000013038 #22 ENSPFOG00000013086 SANBR (ENSPFOG00000013110) #27 XPO1 (ENSPFOG00000013233) #31 ENSPFOG00000013327 pcgf6 (ENSPFOG00000013331) inaa (ENSPFOG00000013372) sertad2b (ENSPFOG00000020903) Guppy MODERN SPECIES 445 ENSPREG00000010783 mcfd2 (ENSPREG00000010773) ENSPREG00000010761 TTC7A (ENSPREG00000010741) calm2a (ENSPREG00000010724) ENSPREG00000010681 ENSPREG00000010634 epcam (ENSPREG00000010615) PLEKHH2 (ENSPREG00000010530) ENSPREG00000010477 zfp36l2 (ENSPREG00000010467) ENSPREG00000010440 ENSPREG00000010420 haao (ENSPREG00000010380) papolg (ENSPREG00000010358) #20 ENSPREG00000010340 #22 SANBR (ENSPREG00000010270) #27 XPO1 (ENSPREG00000010135) #31 ENSPREG00000010104 pcgf6 (ENSPREG00000010092) INA (ENSPREG00000010072) sertad2b (ENSPREG00000010065) slc1a4 (ENSPREG00000010052) smap1 (ENSPREG00000010031) b3gat2 (ENSPREG00000010002) OGFRL1 (ENSPREG00000009987) asrgl1 (ENSPREG00000009974) RIMS1 (ENSPREG00000009811) ENSPREG00000009757 ##19 fancl (ENSPREG00000009728) #17 ENSPREG00000009718 #15 Platyfish MODERN SPECIES 14 socs5b (ENSXMAG00000019827) ENSXMAG00000007514 mcfd2 (ENSXMAG00000007510) TTC7A (ENSXMAG00000007479) calm2a (ENSXMAG00000007477) ENSXMAG00000007473 epcam (ENSXMAG00000007455) PLEKHH2 (ENSXMAG00000007431) ENSXMAG00000007422 zfp36l2 (ENSXMAG00000024222) ENSXMAG00000023008 ENSXMAG00000021797 ENSXMAG00000019826 haao (ENSXMAG00000024497) papolg (ENSXMAG00000007383) #20 REL (ENSXMAG00000007379) #22 pex13 (ENSXMAG00000007376) #26 SANBR (ENSXMAG00000007370) #27 XPO1 (ENSXMAG00000007353) #31 ENSXMAG00000007352 pcgf6 (ENSXMAG00000007347) INA (ENSXMAG00000007342) sertad2b (ENSXMAG00000019825) slc1a4 (ENSXMAG00000007315) smap1 (ENSXMAG00000007313) b3gat2 (ENSXMAG00000007289) OGFRL1 (ENSXMAG00000007288) asrgl1 (ENSXMAG00000020852) RIMS1 (ENSXMAG00000007246) ENSXMAG00000007242 ##19 fancl (ENSXMAG00000007223) #17 NAME_4 ANCESTRAL SPECIES 156 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y.q ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Mummichog MODERN SPECIES 2342 ENSFHEG00000019166 ENSFHEG00000019164 ENSFHEG00000019141 haao (ENSFHEG00000019125) papolg (ENSFHEG00000019080) #20 REL (ENSFHEG00000019074) #22 pex13 (ENSFHEG00000019069) #26 SANBR (ENSFHEG00000019053) #27 XPO1 (ENSFHEG00000018974) #31 ENSFHEG00000018933 #31 ENSFHEG00000018887 pcgf6 (ENSFHEG00000018848) INA (ENSFHEG00000018827) sertad2b (ENSFHEG00000018821) slc1a4 (ENSFHEG00000018816) smap1 (ENSFHEG00000018796) b3gat2 (ENSFHEG00000018781) OGFRL1 (ENSFHEG00000018769) asrgl1 (ENSFHEG00000018741) RIMS1 (ENSFHEG00000018704) ENSFHEG00000018587 Sheepshead minnow MODERN SPECIES 152 ENSCVAG00000016487 ENSCVAG00000016492 haao (ENSCVAG00000016526) papolg (ENSCVAG00000016602) #20 REL (ENSCVAG00000016622) #22 pex13 (ENSCVAG00000016636) #26 SANBR (ENSCVAG00000016699) #27 XPO1 (ENSCVAG00000016788) #31 ENSCVAG00000016826 pcgf6 (ENSCVAG00000016841) INA (ENSCVAG00000016861) sertad2b (ENSCVAG00000016869) slc1a4 (ENSCVAG00000016917) smap1 (ENSCVAG00000016930) b3gat2 (ENSCVAG00000016951) OGFRL1 (ENSCVAG00000016978) asrgl1 (ENSCVAG00000016991) ENSCVAG00000017010 RIMS1 (ENSCVAG00000000436) ENSCVAG00000017083 ##19 Oryzias ANCESTRAL SPECIES 6 ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.b ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.b ##19 ENSGT00940000155134.y ENSGT00950000183045.A.a.a ENSGT00390000018730.B ENSGT00940000159583 ENSGT00940000155884.a.c ENSGT00940000157081 ENSGT00530000063867.b Oryzias_b ANCESTRAL SPECIES 7 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.b ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000155076.b.b ENSGT00990000203619.A.b.b.b.a.e.d ENSGT00990000203619.A.b.b.b.a.e.c ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000168731 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.b ##19 ENSGT00940000155134.y ENSGT00950000183045.A.a.a ENSGT00390000018730.B ENSGT00940000159583 ENSGT00940000155884.a.c ENSGT00940000157081 ENSGT00530000063867.b Javanese ricefish MODERN SPECIES 6 TMEM41A (ENSOJAG00000014581) GPR155 (ENSOJAG00000014591) mtx2 (ENSOJAG00000014691) ENSOJAG00000014818 ENSOJAG00000014824 ENSOJAG00000014837 chrna1 (ENSOJAG00000014856) ENSOJAG00000014913 ENSOJAG00000014920 ENSOJAG00000014930 OXER1 (ENSOJAG00000014957) OXER1 (ENSOJAG00000014966) ENSOJAG00000014992 haao (ENSOJAG00000015008) papolg (ENSOJAG00000015154) #20 REL (ENSOJAG00000016779) #22 ENSOJAG00000016840 SANBR (ENSOJAG00000016850) #27 XPO1 (ENSOJAG00000016919) #31 pcgf6 (ENSOJAG00000017249) INA (ENSOJAG00000017264) ENSOJAG00000017278 ENSOJAG00000017335 ENSOJAG00000017352 ENSOJAG00000017359 ENSOJAG00000017364 ENSOJAG00000017389 #15 fancl (ENSOJAG00000017446) #17 ENSOJAG00000017511 ENSOJAG00000005991 ##19 RIMS1 (ENSOJAG00000006120) Indian medaka MODERN SPECIES 27 ENSOMEG00000001507 ENSOMEG00000001501 ENSOMEG00000001496 chrna1 (ENSOMEG00000001489) cdh11 (ENSOMEG00000001478) ENSOMEG00000001464 MCM8 (ENSOMEG00000001455) CRLS1 (ENSOMEG00000001438) ENSOMEG00000001434 rhoq (ENSOMEG00000001428) OXER1 (ENSOMEG00000001422) OXER1 (ENSOMEG00000001420) ENSOMEG00000001417 haao (ENSOMEG00000001413) papolg (ENSOMEG00000001406) #20 ENSOMEG00000001401 #22 ENSOMEG00000001395 SANBR (ENSOMEG00000001393) #27 XPO1 (ENSOMEG00000001384) #31 pcgf6 (ENSOMEG00000001379) INA (ENSOMEG00000001378) ENSOMEG00000000008 ENSOMEG00000001371 ENSOMEG00000001358 ENSOMEG00000001344 ENSOMEG00000001323 socs5b (ENSOMEG00000001322) ENSOMEG00000001318 ENSOMEG00000001316 mcfd2 (ENSOMEG00000001314) TTC7A (ENSOMEG00000001309) Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e.e ENSGT00990000203619.A.b.b.b.a.e.f ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.b ##19 ENSGT00940000155134.y ENSGT00950000183045.A.a.a ENSGT00390000018730.B ENSGT00940000159583 ENSGT00940000155884.a.c ENSGT00940000157081 ENSGT00530000063867.b Japanese Medaka HdrR MODERN SPECIES 6 mcfd2 (ENSORLG00000028193) TTC7A (ENSORLG00000001444) calm2a (ENSORLG00000027222) ENSORLG00000028809 ENSORLG00000024025 epcam (ENSORLG00000019684) ENSORLG00000001469 PLEKHH2 (ENSORLG00000001497) thada (ENSORLG00000001515) zfp36l2 (ENSORLG00000022580) ENSORLG00000001530 ENSORLG00000023646 ENSORLG00000001535 haao (ENSORLG00000023483) papolg (ENSORLG00000001577) #20 REL (ENSORLG00000001586) #22 pex13 (ENSORLG00000001597) #26 SANBR (ENSORLG00000001625) #27 XPO1 (ENSORLG00000001642) #31 pcgf6 (ENSORLG00000001649) ENSORLG00000001662 ENSORLG00000029181 ENSORLG00000028110 ENSORLG00000001676 #15 fancl (ENSORLG00000001695) #17 ENSORLG00000001704 ##19 ENSORLG00000024560 RIMS1 (ENSORLG00000001748) ENSORLG00000025163 asrgl1 (ENSORLG00000020232) OGFRL1 (ENSORLG00000020237) Ovalentaria_B ANCESTRAL SPECIES 25 ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000164251 ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Pomacentridae ANCESTRAL SPECIES 36 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000164251 ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00940000164218 ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Pomacentridae_A ANCESTRAL SPECIES 41 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000164251 ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00940000164218 ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Amphiprion ANCESTRAL SPECIES 47 ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000180563 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Clown anemonefish MODERN SPECIES 1436 ENSAOCG00000010297 ENSAOCG00000010275 haao (ENSAOCG00000002723) papolg (ENSAOCG00000010254) #20 REL (ENSAOCG00000010230) #22 pex13 (ENSAOCG00000010214) #26 SANBR (ENSAOCG00000010190) #27 XPO1 (ENSAOCG00000010121) #31 ENSAOCG00000010045 pcgf6 (ENSAOCG00000010019) INA (ENSAOCG00000010008) sertad2b (ENSAOCG00000000609) slc1a4 (ENSAOCG00000009981) smap1 (ENSAOCG00000009935) b3gat2 (ENSAOCG00000009906) Orange clownfish MODERN SPECIES 12 si:ch211-93n23.7 (ENSAPEG00000006439) calm2a (ENSAPEG00000006472) ENSAPEG00000006493 ENSAPEG00000006548 ENSAPEG00000006565 ENSAPEG00000006578 epcam (ENSAPEG00000006604) PLEKHH2 (ENSAPEG00000006640) ENSAPEG00000006745 ENSAPEG00000006867 zfp36l2 (ENSAPEG00000006879) ENSAPEG00000006897 ENSAPEG00000006917 haao (ENSAPEG00000006928) papolg (ENSAPEG00000006944) #20 REL (ENSAPEG00000006957) #22 pex13 (ENSAPEG00000006970) #26 SANBR (ENSAPEG00000006991) #27 XPO1 (ENSAPEG00000007038) #31 ENSAPEG00000007162 pcgf6 (ENSAPEG00000007241) INA (ENSAPEG00000007255) sertad2b (ENSAPEG00000007263) slc1a4 (ENSAPEG00000007270) smap1 (ENSAPEG00000007307) b3gat2 (ENSAPEG00000007371) OGFRL1 (ENSAPEG00000007402) asrgl1 (ENSAPEG00000007447) RIMS1 (ENSAPEG00000007462) ENSAPEG00000007547 ENSAPEG00000007654 ##19 Spiny chromis MODERN SPECIES 151 utp23 (ENSAPOG00000004608) utp23 (ENSAPOG00000004620) lrp12 (ENSAPOG00000004635) zfp36l2 (ENSAPOG00000004647) ENSAPOG00000004660 ENSAPOG00000000117 haao (ENSAPOG00000004722) papolg (ENSAPOG00000004798) #20 REL (ENSAPOG00000004836) #22 pex13 (ENSAPOG00000004860) #26 SANBR (ENSAPOG00000004895) #27 XPO1 (ENSAPOG00000004984) #31 ENSAPOG00000005039 pcgf6 (ENSAPOG00000005073) INA (ENSAPOG00000005100) sertad2b (ENSAPOG00000005117) slc1a4 (ENSAPOG00000005172) Bicolor damselfish MODERN SPECIES 311 si:ch211-93n23.7 (ENSSPAG00000009344) calm2a (ENSSPAG00000009320) ENSSPAG00000009292 ENSSPAG00000009262 epcam (ENSSPAG00000009236) PLEKHH2 (ENSSPAG00000009167) ENSSPAG00000009108 zfp36l2 (ENSSPAG00000009096) ENSSPAG00000009080 ENSSPAG00000009075 haao (ENSSPAG00000009062) papolg (ENSSPAG00000009004) #20 REL (ENSSPAG00000008979) #22 pex13 (ENSSPAG00000008962) #26 SANBR (ENSSPAG00000008889) #27 XPO1 (ENSSPAG00000008738) #31 ENSSPAG00000008688 pcgf6 (ENSSPAG00000008671) INA (ENSSPAG00000008580) sertad2b (ENSSPAG00000008557) slc1a4 (ENSSPAG00000008528) ENSSPAG00000008515 Cichlidae ANCESTRAL SPECIES 13 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Midas cichlid MODERN SPECIES 1143 papolg (ENSACIG00000010546) #20 REL (ENSACIG00000010598) #22 ENSACIG00000010727 SANBR (ENSACIG00000010782) #27 XPO1 (ENSACIG00000010818) #31 ENSACIG00000010866 #31 ENSACIG00000010916 pcgf6 (ENSACIG00000010931) INA (ENSACIG00000010962) sertad2b (ENSACIG00000011011) slc1a4 (ENSACIG00000011034) smap1 (ENSACIG00000011192) b3gat2 (ENSACIG00000011215) OGFRL1 (ENSACIG00000011233) asrgl1 (ENSACIG00000011338) RIMS1 (ENSACIG00000011360) ENSACIG00000011416 Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Haplochromini ANCESTRAL SPECIES 10 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883.h #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883.h #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Haplochromini_B ANCESTRAL SPECIES 59 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245.m.a ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883.h #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Zebra mbuna MODERN SPECIES 1095 ENSMZEG00005018057 mcfd2 (ENSMZEG00005018060) TTC7A (ENSMZEG00005018070) si:ch211-93n23.7 (ENSMZEG00005018098) calm2a (ENSMZEG00005018099) ENSMZEG00005018104 epcam (ENSMZEG00005018107) epcam (ENSMZEG00005018110) PLEKHH2 (ENSMZEG00005018115) ENSMZEG00005018122 zfp36l2 (ENSMZEG00005018129) OXER1 (ENSMZEG00005018131) ENSMZEG00005018133 haao (ENSMZEG00005018135) papolg (ENSMZEG00005018140) #20 rel (ENSMZEG00005018144) #22 pex13 (ENSMZEG00005018148) #26 SANBR (ENSMZEG00005018150) #27 ENSMZEG00005018155 XPO1 (ENSMZEG00005018158) #31 ENSMZEG00005018165 pcgf6 (ENSMZEG00005018168) inaa (ENSMZEG00005018170) sertad2b (ENSMZEG00005018172) slc1a4 (ENSMZEG00005018175) smap1 (ENSMZEG00005018180) b3gat2 (ENSMZEG00005018189) OGFRL1 (ENSMZEG00005018195) asrgl1 (ENSMZEG00005018203) RIMS1 (ENSMZEG00005018210) ENSMZEG00005018229 ##19 Eastern happy MODERN SPECIES 4 calm2a (ENSACLG00000016554) ENSACLG00000016525 ENSACLG00000016501 ENSACLG00000016464 epcam (ENSACLG00000016452) ENSACLG00000016402 epcam (ENSACLG00000016376) PLEKHH2 (ENSACLG00000016220) ENSACLG00000015898 zfp36l2 (ENSACLG00000015842) OXER1 (ENSACLG00000015728) ENSACLG00000015716 ENSACLG00000015704 haao (ENSACLG00000015648) papolg (ENSACLG00000015592) #20 rel (ENSACLG00000015545) #22 pex13 (ENSACLG00000015531) #26 ENSACLG00000015401 SANBR (ENSACLG00000015345) #27 XPO1 (ENSACLG00000015192) #31 ENSACLG00000015079 pcgf6 (ENSACLG00000015043) inaa (ENSACLG00000015027) sertad2b (ENSACLG00000015019) slc1a4 (ENSACLG00000014962) smap1 (ENSACLG00000014878) b3gat2 (ENSACLG00000014794) OGFRL1 (ENSACLG00000014776) ENSACLG00000014736 asrgl1 (ENSACLG00000014731) RIMS1 (ENSACLG00000014225) P. nyererei MODERN SPECIES 357 mcfd2 (ENSPNYG00000006022) TTC7A (ENSPNYG00000006096) si:ch211-93n23.7 (ENSPNYG00000006257) calm2a (ENSPNYG00000006272) ENSPNYG00000006295 ENSPNYG00000006335 ENSPNYG00000006368 epcam (ENSPNYG00000006385) PLEKHH2 (ENSPNYG00000006410) ENSPNYG00000006552 ENSPNYG00000006628 ENSPNYG00000006643 ENSPNYG00000006661 haao (ENSPNYG00000006682) papolg (ENSPNYG00000006729) #20 rel (ENSPNYG00000006794) #22 pex13 (ENSPNYG00000006810) #26 SANBR (ENSPNYG00000006825) #27 ENSPNYG00000006864 XPO1 (ENSPNYG00000006874) #31 ENSPNYG00000006899 pcgf6 (ENSPNYG00000006924) inaa (ENSPNYG00000006939) sertad2b (ENSPNYG00000007002) slc1a4 (ENSPNYG00000007039) ENSPNYG00000007204 Burton s mouthbrooder MODERN SPECIES 945 ENSHBUG00000004793 OXER1 (ENSHBUG00000004818) ENSHBUG00000004825 haao (ENSHBUG00000004846) papolg (ENSHBUG00000004882) #20 rel (ENSHBUG00000004908) #22 pex13 (ENSHBUG00000004925) #26 Lyretail cichlid MODERN SPECIES 500 ENSNBRG00000011905 ENSNBRG00000011916 haao (ENSNBRG00000011926) papolg (ENSNBRG00000011943) #20 rel (ENSNBRG00000012053) #22 ENSNBRG00000012164 SANBR (ENSNBRG00000012188) #27 XPO1 (ENSNBRG00000012229) #31 ENSNBRG00000012289 pcgf6 (ENSNBRG00000012306) INA (ENSNBRG00000012345) sertad2b (ENSNBRG00000012362) slc1a4 (ENSNBRG00000012369) smap1 (ENSNBRG00000012380) b3gat2 (ENSNBRG00000012409) OGFRL1 (ENSNBRG00000012441) Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 4 mcfd2 (ENSONIG00000003041) TTC7A (ENSONIG00000003037) si:ch211-93n23.7 (ENSONIG00000031678) calm2a (ENSONIG00000029039) ENSONIG00000042282 ENSONIG00000028673 ENSONIG00000037284 epcam (ENSONIG00000003020) PLEKHH2 (ENSONIG00000003014) ENSONIG00000002998 zfp36l2 (ENSONIG00000042955) OXER1 (ENSONIG00000002995) ENSONIG00000028207 haao (ENSONIG00000002993) papolg (ENSONIG00000002985) #20 rel (ENSONIG00000002983) #22 pex13 (ENSONIG00000002982) #26 ENSONIG00000043103 ENSONIG00000027301 SANBR (ENSONIG00000002974) #27 XPO1 (ENSONIG00000002969) #31 ENSONIG00000034435 ENSONIG00000032208 ENSONIG00000029244 pcgf6 (ENSONIG00000038648) inaa (ENSONIG00000002959) ENSONIG00000036913 sertad2b (ENSONIG00000028300) slc1a4 (ENSONIG00000002942) smap1 (ENSONIG00000002934) b3gat2 (ENSONIG00000002928) Nile tilapia MODERN SPECIES 11 slc25a48 (ENSONIG00000004280) ENSONIG00000031819 ENSONIG00000029016 ENSONIG00000034689 ENSONIG00000004284 ENSONIG00000040032 cplx2 (ENSONIG00000004287) thoc3 (ENSONIG00000004291) ENSONIG00000004292 gm2a (ENSONIG00000004295) PCDH12 (ENSONIG00000004298) PCDH1 (ENSONIG00000004300) ENSONIG00000036491 ENSONIG00000042025 ENSONIG00000004301 ENSONIG00000042797 #22 ENSONIG00000037929 tmem216 (ENSONIG00000004303) tmed9 (ENSONIG00000004305) b4galt7 (ENSONIG00000004308) emx3 (ENSONIG00000029650) ENSONIG00000004314 ENSONIG00000034776 LTC4S (ENSONIG00000004315) MAML1 (ENSONIG00000004317) canx (ENSONIG00000004319) mgat4b (ENSONIG00000004334) DGKQ (ENSONIG00000004338) ENSONIG00000037579 NFKB1 (ENSONIG00000004349) UBE2D3 (ENSONIG00000004373) Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 ENSGT00390000005537 #17 Eupecaria_A ANCESTRAL SPECIES 26 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 ENSGT00390000005537 #17 Ballan wrasse MODERN SPECIES 269 ENSLBEG00000023175 haao (ENSLBEG00000023193) papolg (ENSLBEG00000023218) #20 ENSLBEG00000023239 #22 tsnax (ENSLBEG00000023264) ENSLBEG00000023303 SIPA1L2 (ENSLBEG00000023375) ntpcr (ENSLBEG00000023452) ENSLBEG00000023493 KLHDC3 (ENSLBEG00000023514) npas4l (ENSLBEG00000023546) ENSLBEG00000023560 Eupecaria_B ANCESTRAL SPECIES 26 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 ENSGT00390000005537 #17 Perciformes ANCESTRAL SPECIES 17 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00990000206002 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 ENSGT00940000158042 #15 Perciformes_a ANCESTRAL SPECIES 40 ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00990000206002 ENSGT00950000182980.a.b.b.b ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a Pike perch MODERN SPECIES 62 mcfd2 (ENSSLUG00000007002) TTC7A (ENSSLUG00000006976) ENSSLUG00000006966 calm2a (ENSSLUG00000006958) ENSSLUG00000006952 ENSSLUG00000006941 epcam (ENSSLUG00000006926) PLEKHH2 (ENSSLUG00000006893) ENSSLUG00000006857 zfp36l2 (ENSSLUG00000006843) OXER1 (ENSSLUG00000006838) OXER1 (ENSSLUG00000006836) ENSSLUG00000006825 haao (ENSSLUG00000006811) papolg (ENSSLUG00000003953) #20 REL (ENSSLUG00000003714) #22 pex13 (ENSSLUG00000003700) #26 SANBR (ENSSLUG00000003658) #27 XPO1 (ENSSLUG00000003545) #31 ENSSLUG00000003514 pcgf6 (ENSSLUG00000003502) inaa (ENSSLUG00000003433) ENSSLUG00000003414 ttl (ENSSLUG00000003402) fignl1 (ENSSLUG00000003392) ikzf1 (ENSSLUG00000003171) ENSSLUG00000003128 vwc2 (ENSSLUG00000003071) zgc:110045 (ENSSLUG00000002981) MOCOS (ENSSLUG00000002934) si:ch211-117n7.7 (ENSSLUG00000002884) Cottioidei ANCESTRAL SPECIES 68 ENSGT00940000164285.a ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y Lumpfish MODERN SPECIES 6 socs5b (ENSCLMG00005022150) ENSCLMG00005022151 mcfd2 (ENSCLMG00005022153) ENSCLMG00005022154 TTC7A (ENSCLMG00005022155) calm2a (ENSCLMG00005022156) ENSCLMG00005022157 ENSCLMG00005022158 epcam (ENSCLMG00005022164) PLEKHH2 (ENSCLMG00005022166) ENSCLMG00005022178 zfp36l2 (ENSCLMG00005022182) ENSCLMG00005022183 haao (ENSCLMG00005022184) papolg (ENSCLMG00005022200) #20 ENSCLMG00005022542 #22 pex13 (ENSCLMG00005022545) #26 ENSCLMG00005022546 XPO1 (ENSCLMG00005022555) #31 ENSCLMG00005022562 pcgf6 (ENSCLMG00005022564) INA (ENSCLMG00005022572) sertad2b (ENSCLMG00005004355) slc1a4 (ENSCLMG00005004397) ENSCLMG00005004647 b3gat2 (ENSCLMG00005004656) OGFRL1 (ENSCLMG00005004666) asrgl1 (ENSCLMG00005004693) RIMS1 (ENSCLMG00005004792) ENSCLMG00005005051 ENSCLMG00005005055 Eupecaria_C ANCESTRAL SPECIES 28 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 ENSGT00390000005537 #17 Eupercaria_incertae_sedis ANCESTRAL SPECIES 32 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 ENSGT00390000005537 #17 European seabass MODERN SPECIES 1 ENSDLAG00005001092 ENSDLAG00005032916 ENSDLAG00005030644 ENSDLAG00005001107 ENSDLAG00005001110 ENSDLAG00005026402 PAPOLG (ENSDLAG00005001183) #20 REL (ENSDLAG00005003756) #22 PEX13 (ENSDLAG00005003780) #26 SANBR (ENSDLAG00005003788) #27 ENSDLAG00005034759 #31 ENSDLAG00005029329 ENSDLAG00005004006 ENSDLAG00005034175 ENSDLAG00005027007 ENSDLAG00005004045 smap1 (ENSDLAG00005028051) b3gat2 (ENSDLAG00005034533) OGFRL1 (ENSDLAG00005031770) asrgl1 (ENSDLAG00005004145) RIMS1 (ENSDLAG00005004444) ENSDLAG00005008395 ##19 ENSDLAG00005008400 Large yellow croaker MODERN SPECIES 2 si:ch211-93n23.7 (ENSLCRG00005008445) calm2a (ENSLCRG00005008402) ENSLCRG00005008400 ENSLCRG00005008397 ENSLCRG00005008382 epcam (ENSLCRG00005008381) PLEKHH2 (ENSLCRG00005008334) ENSLCRG00005008327 zfp36l2 (ENSLCRG00005008324) ENSLCRG00005008323 ENSLCRG00005008322 ENSLCRG00005008321 ENSLCRG00005008319 haao (ENSLCRG00005008315) papolg (ENSLCRG00005005738) #20 rel (ENSLCRG00005005704) #22 pex13 (ENSLCRG00005005699) #26 SANBR (ENSLCRG00005005684) #27 XPO1 (ENSLCRG00005005671) #31 ENSLCRG00005005670 pcgf6 (ENSLCRG00005005668) inaa (ENSLCRG00005005667) ENSLCRG00005005666 ENSLCRG00005005665 sertad2b (ENSLCRG00005005663) ENSLCRG00005005662 slc1a4 (ENSLCRG00005005660) smap1 (ENSLCRG00005005657) b3gat2 (ENSLCRG00005005655) OGFRL1 (ENSLCRG00005005654) asrgl1 (ENSLCRG00005005652) Gilthead seabream MODERN SPECIES 6 ENSSAUG00010009593 mcfd2 (ENSSAUG00010009594) TTC7A (ENSSAUG00010009599) si:ch211-93n23.7 (ENSSAUG00010009602) calm2a (ENSSAUG00010009603) ENSSAUG00010009720 ENSSAUG00010009721 epcam (ENSSAUG00010009722) PLEKHH2 (ENSSAUG00010009733) ENSSAUG00010009782 zfp36l2 (ENSSAUG00010009846) OXER1 (ENSSAUG00010009848) ENSSAUG00010009849 haao (ENSSAUG00010009852) papolg (ENSSAUG00010009887) #20 REL (ENSSAUG00010011587) #22 pex13 (ENSSAUG00010011589) #26 SANBR (ENSSAUG00010011590) #27 XPO1 (ENSSAUG00010011605) #31 ENSSAUG00010011613 pcgf6 (ENSSAUG00010011615) INA (ENSSAUG00010011618) sertad2b (ENSSAUG00010011619) slc1a4 (ENSSAUG00010011624) ENSSAUG00010011659 ENSSAUG00010011661 b3gat2 (ENSSAUG00010011663) OGFRL1 (ENSSAUG00010011664) asrgl1 (ENSSAUG00010011665) RIMS1 (ENSSAUG00010011687) ENSSAUG00010013841 ##19 Tetraodontidae ANCESTRAL SPECIES 185 ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 Tetraodon MODERN SPECIES 26 rhoq (ENSTNIG00000017093) socs5b (ENSTNIG00000017094) ENSTNIG00000017095 mcfd2 (ENSTNIG00000017096) ENSTNIG00000017097 ENSTNIG00000000458 calm2a (ENSTNIG00000017098) ENSTNIG00000017099 epcam (ENSTNIG00000017100) PLEKHH2 (ENSTNIG00000017101) ENSTNIG00000017102 zfp36l2 (ENSTNIG00000017103) haao (ENSTNIG00000017104) ENSTNIG00000017105 papolg (ENSTNIG00000017106) #20 ENSTNIG00000017107 #22 ENSTNIG00000017108 SANBR (ENSTNIG00000017109) #27 rpp30 (ENSTNIG00000018540) nudt13 (ENSTNIG00000018541) ENSTNIG00000002344 noc3l (ENSTNIG00000018542) ENSTNIG00000018610 42sp43 (ENSTNIG00000018611) ENSTNIG00000018612 ENSTNIG00000018613 wdr26b (ENSTNIG00000018614) fez2b (ENSTNIG00000018615) esrrgb (ENSTNIG00000017713) st8sia2 (ENSTNIG00000018616) ENSTNIG00000018617 Fugu DUPLICATION Fugu MODERN SPECIES 16 TTC7A (ENSTRUG00000008737) ENSTRUG00000023610 ENSTRUG00000024614 calm2a (ENSTRUG00000008685) ENSTRUG00000021848 ENSTRUG00000033009 epcam (ENSTRUG00000008475) ENSTRUG00000031735 PLEKHH2 (ENSTRUG00000007949) ENSTRUG00000007018 zfp36l2 (ENSTRUG00000032248) ENSTRUG00000030276 haao (ENSTRUG00000006699) papolg (ENSTRUG00000006410) #20 ENSTRUG00000006394 #22 REL (ENSTRUG00000029404) #22 ENSTRUG00000023093 pex13 (ENSTRUG00000028922) #26 XPO1 (ENSTRUG00000033434) #31 pcca (ENSTRUG00000004990) ENSTRUG00000032710 vps8 (ENSTRUG00000003896) ENSTRUG00000027886 ENSTRUG00000027647 ctu2 (ENSTRUG00000024348) RNF166 (ENSTRUG00000023203) ENSTRUG00000026497 cyp17a1 (ENSTRUG00000028854) borcs7 (ENSTRUG00000022564) nt5c2a (ENSTRUG00000030293) ENSTRUG00000031240 Fugu MODERN SPECIES 16 mcfd2 (ENSTRUG00000009161) TTC7A (ENSTRUG00000008737) ENSTRUG00000023610 ENSTRUG00000024614 calm2a (ENSTRUG00000008685) ENSTRUG00000021848 ENSTRUG00000033009 epcam (ENSTRUG00000008475) ENSTRUG00000031735 PLEKHH2 (ENSTRUG00000007949) ENSTRUG00000007018 zfp36l2 (ENSTRUG00000032248) ENSTRUG00000030276 haao (ENSTRUG00000006699) papolg (ENSTRUG00000006410) #20 ENSTRUG00000006394 #22 REL (ENSTRUG00000029404) #22 ENSTRUG00000023093 pex13 (ENSTRUG00000028922) #26 XPO1 (ENSTRUG00000033434) #31 pcca (ENSTRUG00000004990) ENSTRUG00000032710 vps8 (ENSTRUG00000003896) ENSTRUG00000027886 ENSTRUG00000027647 ctu2 (ENSTRUG00000024348) RNF166 (ENSTRUG00000023203) ENSTRUG00000026497 cyp17a1 (ENSTRUG00000028854) borcs7 (ENSTRUG00000022564) nt5c2a (ENSTRUG00000030293) Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000162292 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Zig-zag eel MODERN SPECIES 6 ENSMAMG00000011055 mcfd2 (ENSMAMG00000011042) TTC7A (ENSMAMG00000011025) si:ch211-93n23.7 (ENSMAMG00000011013) calm2a (ENSMAMG00000010998) ENSMAMG00000028117 ENSMAMG00000010929 epcam (ENSMAMG00000010904) PLEKHH2 (ENSMAMG00000010890) ENSMAMG00000010805 ZFP36L2 (ENSMAMG00000024578) ENSMAMG00000010788 ENSMAMG00000010776 HAAO (ENSMAMG00000025680) PAPOLG (ENSMAMG00000010667) #20 REL (ENSMAMG00000010658) #22 PEX13 (ENSMAMG00000010646) #26 SANBR (ENSMAMG00000010631) #27 XPO1 (ENSMAMG00000010568) #31 ENSMAMG00000010542 ENSMAMG00000026718 ENSMAMG00000010489 ENSMAMG00000010458 ENSMAMG00000025714 ENSMAMG00000010434 ENSMAMG00000010392 ENSMAMG00000025551 b3gat2 (ENSMAMG00000010380) OGFRL1 (ENSMAMG00000010338) ENSMAMG00000010296 asrgl1 (ENSMAMG00000025178) Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000162292 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Siamese fighting fish MODERN SPECIES 6 ENSBSLG00000021713 mcfd2 (ENSBSLG00000021690) TTC7A (ENSBSLG00000021328) calm2a (ENSBSLG00000021159) ENSBSLG00000021077 ENSBSLG00000021038 ENSBSLG00000020987 epcam (ENSBSLG00000020954) PLEKHH2 (ENSBSLG00000019739) ENSBSLG00000019710 zfp36l2 (ENSBSLG00000019709) ENSBSLG00000019702 ENSBSLG00000019699 haao (ENSBSLG00000019690) papolg (ENSBSLG00000017966) #20 REL (ENSBSLG00000017839) #22 pex13 (ENSBSLG00000017825) #26 SANBR (ENSBSLG00000017756) #27 XPO1 (ENSBSLG00000017320) #31 ENSBSLG00000017271 pcgf6 (ENSBSLG00000017236) inaa (ENSBSLG00000017027) sertad2b (ENSBSLG00000017013) slc1a4 (ENSBSLG00000016907) ENSBSLG00000016900 smap1 (ENSBSLG00000016727) b3gat2 (ENSBSLG00000015905) OGFRL1 (ENSBSLG00000015898) asrgl1 (ENSBSLG00000015893) RIMS1 (ENSBSLG00000014248) ENSBSLG00000014063 ##19 Climbing perch MODERN SPECIES 6 ENSATEG00000009486 mcfd2 (ENSATEG00000009468) TTC7A (ENSATEG00000009434) si:ch211-93n23.7 (ENSATEG00000009420) calm2a (ENSATEG00000029989) ENSATEG00000009335 ENSATEG00000029611 epcam (ENSATEG00000009305) PLEKHH2 (ENSATEG00000009267) ENSATEG00000009131 ZFP36L2 (ENSATEG00000009119) ENSATEG00000009101 ENSATEG00000009093 ENSATEG00000009086 PAPOLG (ENSATEG00000009007) #20 REL (ENSATEG00000008984) #22 PEX13 (ENSATEG00000008975) #26 SANBR (ENSATEG00000008937) #27 XPO1 (ENSATEG00000008816) #31 ENSATEG00000029313 ENSATEG00000008747 ENSATEG00000008716 ENSATEG00000008702 ENSATEG00000008668 smap1 (ENSATEG00000027185) b3gat2 (ENSATEG00000008614) OGFRL1 (ENSATEG00000008583) asrgl1 (ENSATEG00000008570) RIMS1 (ENSATEG00000008497) ENSATEG00000008394 ##19 ENSATEG00000027192 Carangaria ANCESTRAL SPECIES 19 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Carangaria_A ANCESTRAL SPECIES 31 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00730000110943.B.c ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Barramundi perch MODERN SPECIES 511 ENSLCAG00010000994 ENSLCAG00010000995 haao (ENSLCAG00010000997) papolg (ENSLCAG00010001158) #20 REL (ENSLCAG00010001790) #22 pex13 (ENSLCAG00010001806) #26 SANBR (ENSLCAG00010001809) #27 XPO1 (ENSLCAG00010001836) #31 ENSLCAG00010001885 pcgf6 (ENSLCAG00010001908) inaa (ENSLCAG00010001916) sertad2b (ENSLCAG00010001922) Seriola ANCESTRAL SPECIES 14 ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499 ENSGT01050000244968.d ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000159204 ENSGT00940000154962.B ENSGT00940000157274 ENSGT00940000161556 ENSGT00940000153441.a.b ENSGT00390000000403 ENSGT00940000159406 ENSGT00940000159378 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00390000005537 #17 Greater amberjack MODERN SPECIES 30 pcbd1 (ENSSDUG00000018415) si:dkey-192p21.6 (ENSSDUG00000018383) ret (ENSSDUG00000018296) csgalnact2 (ENSSDUG00000018272) sec23ip (ENSSDUG00000018227) mcmbp (ENSSDUG00000018172) inpp5f (ENSSDUG00000018080) bag3 (ENSSDUG00000018058) tial1 (ENSSDUG00000018021) PKD2L1 (ENSSDUG00000017986) atoh7 (ENSSDUG00000017977) MYPN (ENSSDUG00000017929) CACUL1 (ENSSDUG00000017907) ENSSDUG00000017890 dnajc12 (ENSSDUG00000017884) REL (ENSSDUG00000017861) #22 pex13 (ENSSDUG00000017851) #26 SANBR (ENSSDUG00000017782) #27 XPO1 (ENSSDUG00000017709) #31 ENSSDUG00000017676 pcgf6 (ENSSDUG00000017656) INA (ENSSDUG00000017633) sertad2b (ENSSDUG00000017629) slc1a4 (ENSSDUG00000017597) smap1 (ENSSDUG00000017573) b3gat2 (ENSSDUG00000017562) OGFRL1 (ENSSDUG00000017527) asrgl1 (ENSSDUG00000017515) RIMS1 (ENSSDUG00000017330) ENSSDUG00000017290 ##19 ENSSDUG00000017276 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 2164 ENSSLDG00000018194 #22 Yellowtail amberjack MODERN SPECIES 3109 pcbd1 (ENSSLDG00000020420) si:dkey-192p21.6 (ENSSLDG00000020391) ret (ENSSLDG00000020309) csgalnact2 (ENSSLDG00000020271) sec23ip (ENSSLDG00000020204) mcmbp (ENSSLDG00000020168) inpp5f (ENSSLDG00000020058) bag3 (ENSSLDG00000020035) tial1 (ENSSLDG00000020001) PKD2L1 (ENSSLDG00000019979) atoh7 (ENSSLDG00000019970) MYPN (ENSSLDG00000019939) CACUL1 (ENSSLDG00000019914) SIRT1 (ENSSLDG00000019885) dnajc12 (ENSSLDG00000019879) REL (ENSSLDG00000019718) #22 pex13 (ENSSLDG00000019689) #26 SANBR (ENSSLDG00000019651) #27 XPO1 (ENSSLDG00000019530) #31 ENSSLDG00000019493 pcgf6 (ENSSLDG00000019477) inaa (ENSSLDG00000019464) sertad2b (ENSSLDG00000019457) slc1a4 (ENSSLDG00000019426) smap1 (ENSSLDG00000019406) b3gat2 (ENSSLDG00000019390) mibp2 (ENSSLDG00000019383) OGFRL1 (ENSSLDG00000019346) asrgl1 (ENSSLDG00000019318) RIMS1 (ENSSLDG00000019205) ENSSLDG00000019191 ##19 Pleuronectoidei ANCESTRAL SPECIES 28 ENSGT00940000164285.a ENSGT00940000165391 ENSGT00940000154141.B ENSGT00940000158638 ENSGT00940000167263 ENSGT00950000182980.a.b.b.b ENSGT00940000167711.a.b ENSGT00940000167711.a.a ENSGT00390000018245 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.s.a #31 ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00940000155884.a.c ENSGT00940000159583 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000156983.a.b ##19 ENSGT00910000147025 Turbot MODERN SPECIES 6 ENSSMAG00000032665 socs5b (ENSSMAG00000015236) ENSSMAG00000015240 mcfd2 (ENSSMAG00000026884) ENSSMAG00000015262 ENSSMAG00000015338 ENSSMAG00000023870 ENSSMAG00000015375 epcam (ENSSMAG00000015402) PLEKHH2 (ENSSMAG00000015414) ENSSMAG00000015466 ZFP36L2 (ENSSMAG00000036742) ENSSMAG00000033167 HAAO (ENSSMAG00000015579) PAPOLG (ENSSMAG00000015598) #20 REL (ENSSMAG00000015627) #22 PEX13 (ENSSMAG00000015649) #26 SANBR (ENSSMAG00000015670) #27 XPO1 (ENSSMAG00000015718) #31 ENSSMAG00000015794 ENSSMAG00000026367 ENSSMAG00000015870 ENSSMAG00000025768 ENSSMAG00000015890 ENSSMAG00000030212 smap1 (ENSSMAG00000015928) b3gat2 (ENSSMAG00000022064) OGFRL1 (ENSSMAG00000015991) asrgl1 (ENSSMAG00000016011) RIMS1 (ENSSMAG00000016024) ENSSMAG00000016172 ##19 Tongue sole MODERN SPECIES 3 ENSCSEG00000001568 ENSCSEG00000001580 lhb (ENSCSEG00000001582) rtn4a (ENSCSEG00000001594) ENSCSEG00000001598 rps27a (ENSCSEG00000001603) bmpr1aa (ENSCSEG00000001608) ldb3a (ENSCSEG00000001614) ENSCSEG00000001621 tspan14 (ENSCSEG00000001627) perp (ENSCSEG00000001633) TNFAIP3 (ENSCSEG00000001638) HNRNPLL (ENSCSEG00000001646) chchd1 (ENSCSEG00000001654) cdk1 (ENSCSEG00000001655) REL (ENSCSEG00000001659) #22 pex13 (ENSCSEG00000001674) #26 SANBR (ENSCSEG00000001682) #27 ENSCSEG00000001688 #31 XPO1 (ENSCSEG00000001693) #31 znf503 (ENSCSEG00000001704) ENSCSEG00000001710 ENSCSEG00000001720 ENSCSEG00000001722 dlg5a (ENSCSEG00000001733) anxa11a (ENSCSEG00000001754) zcchc24 (ENSCSEG00000001838) ppifa (ENSCSEG00000001846) ENSCSEG00000001851 ENSCSEG00000001864 CCDC85A (ENSCSEG00000001869) #12 Otomorpha ANCESTRAL SPECIES 10 ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT00950000183029.B.i.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.t #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.r ENSGT00940000153464.B.z.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab Otophysi ANCESTRAL SPECIES 26 ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT00950000183029.B.i.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000155525 ENSGT00940000163077 ENSGT00390000000046 ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499 ENSGT01050000244968.d ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000159204 ENSGT00940000154962.B ENSGT00940000157274 ENSGT00940000161556 Characiphysae ANCESTRAL SPECIES 13 ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT00950000183029.B.i.a.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r.c #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000155525 ENSGT00940000163077 ENSGT00390000000046 ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499 ENSGT01050000244968.d ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000159204 ENSGT00940000154962.B ENSGT00940000157274 ENSGT00940000161556 ENSGT00940000166377.e Characiphysae_b ANCESTRAL SPECIES 10 ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT00950000183029.B.i.a.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r.c #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000155525 ENSGT00940000163077 ENSGT00390000000046 ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499 ENSGT01050000244968.d ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000159204 ENSGT00940000154962.B ENSGT00940000157274 ENSGT00940000161556 ENSGT00940000166377.e Characoidei ANCESTRAL SPECIES 5 ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT00950000183029.B.i.a.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a #12 ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r.c #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000155525 ENSGT00940000163077 ENSGT00390000000046 ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499 ENSGT01050000244968.d ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000159204 ENSGT00940000154962.B ENSGT00940000157274 ENSGT00940000161556 ENSGT00940000166377.e Red-bellied piranha MODERN SPECIES 45 slc7a6os (ENSPNAG00000015813) slc7a6 (ENSPNAG00000015694) ENSPNAG00000015659 adgrg1 (ENSPNAG00000015640) ccdc102a (ENSPNAG00000015630) DOK4 (ENSPNAG00000007054) ENSPNAG00000006644 dnaaf1 (ENSPNAG00000003402) nrn1lb (ENSPNAG00000003400) bcl11aa (ENSPNAG00000015553) #19 papolg (ENSPNAG00000015521) #20 rel (ENSPNAG00000015394) #22 pdlim1 (ENSPNAG00000015321) ENSPNAG00000015289 sgpl1 (ENSPNAG00000015266) pcbd1 (ENSPNAG00000015221) ENSPNAG00000015206 si:dkey-192p21.6 (ENSPNAG00000015170) ret (ENSPNAG00000015122) csgalnact2 (ENSPNAG00000015022) sec23ip (ENSPNAG00000014993) mcmbp (ENSPNAG00000014983) inpp5f (ENSPNAG00000003318) bag3 (ENSPNAG00000003286) tial1 (ENSPNAG00000003272) PKD2L1 (ENSPNAG00000014784) atoh7 (ENSPNAG00000014747) Mexicana tetra MODERN SPECIES 17 RIMS1 (ENSAMXG00000011907) KCNQ5 (ENSAMXG00000004427) ddx43 (ENSAMXG00000004457) CGAS (ENSAMXG00000036028) EEF1A1 (ENSAMXG00000004487) slc17a5 (ENSAMXG00000004496) RIN2 (ENSAMXG00000004501) SLC24A3 (ENSAMXG00000039529) soul2 (ENSAMXG00000038941) ccdc85a (ENSAMXG00000038903) #12 vrk2 (ENSAMXG00000004559) #15 fancl (ENSAMXG00000030243) #17 bcl11aa (ENSAMXG00000040355) #19 ENSAMXG00000029450 papolg (ENSAMXG00000004611) #20 rel (ENSAMXG00000042935) #22 pdlim1 (ENSAMXG00000004659) neurog3 (ENSAMXG00000040416) sgpl1 (ENSAMXG00000004674) pcbd1 (ENSAMXG00000030052) si:dkey-192p21.6 (ENSAMXG00000004698) ret (ENSAMXG00000004705) csgalnact2 (ENSAMXG00000004707) sec23ip (ENSAMXG00000004712) mcmbp (ENSAMXG00000004722) inpp5f (ENSAMXG00000004725) bag3 (ENSAMXG00000004732) tial1 (ENSAMXG00000038511) PKD2L1 (ENSAMXG00000004742) atoh7 (ENSAMXG00000025967) ENSAMXG00000038164 Electric eel MODERN SPECIES 426 BCL11A (ENSEEEG00000018956) #19 ENSEEEG00000018953 #19 papolg (ENSEEEG00000017140) #20 rel (ENSEEEG00000017073) #22 pdlim1 (ENSEEEG00000017072) ENSEEEG00000017071 sgpl1 (ENSEEEG00000017070) pcbd1 (ENSEEEG00000017069) ENSEEEG00000017068 ret (ENSEEEG00000017064) csgalnact2 (ENSEEEG00000017063) sec23ip (ENSEEEG00000017026) mcmbp (ENSEEEG00000017012) inpp5f (ENSEEEG00000017011) bag3 (ENSEEEG00000017009) tial1 (ENSEEEG00000016966) Channel catfish MODERN SPECIES 22 rims1 (ENSIPUG00000024250) kcnq5 (ENSIPUG00000024247) ddx43 (ENSIPUG00000023423) CGAS (ENSIPUG00000023419) EEF1A1 (ENSIPUG00000023399) SLC17A5 (ENSIPUG00000023388) rin2 (ENSIPUG00000023376) slc24a3 (ENSIPUG00000023365) soul2 (ENSIPUG00000023353) ccdc85a (ENSIPUG00000023342) #12 vrk2 (ENSIPUG00000023328) #15 FANCL (ENSIPUG00000023295) #17 bcl11a (ENSIPUG00000021763) #19 ENSIPUG00000021759 papolg (ENSIPUG00000021642) #20 rel (ENSIPUG00000021629) #22 Pdlim1 (ENSIPUG00000021620) ENSIPUG00000021615 sgpl1 (ENSIPUG00000021596) pcbd1 (ENSIPUG00000021570) si:dkey-192p21.6 (ENSIPUG00000021544) ret (ENSIPUG00000021488) CSGALNACT2 (ENSIPUG00000021464) Sec23ip (ENSIPUG00000021437) mcmbp (ENSIPUG00000021364) inpp5f (ENSIPUG00000021274) bag3 (ENSIPUG00000021263) tial1 (ENSIPUG00000021261) PKD2L1 (ENSIPUG00000021253) atoh7 (ENSIPUG00000021250) ENSIPUG00000021238 Cyprinoidei ANCESTRAL SPECIES 11 ENSGT00390000018730.B ENSGT00950000183045.A.a.a ENSGT00940000155134.y ENSGT00940000155933.b.a ENSGT00940000163653 ENSGT00950000183029.B.i.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00940000155525 ENSGT00940000163077 ENSGT00390000000046 ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499 ENSGT01050000244968.d ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000159204 ENSGT00940000154962.B ENSGT00940000157274 ENSGT00940000161556 ENSGT00940000166377.e Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 255 ENSGT01050000244827.E.g.b ENSGT00950000183029.B.j.h ENSGT00940000166291.a ENSGT00940000154866.B.a.c ENSGT01030000234532.A.a.a.b.j.a.b ENSGT00940000160412.b.a ENSGT00940000157361.a.m.b #12 ENSGT00940000158042.h #15 ENSGT00390000005537.g #17 ENSGT00940000156983.a.a.r.a #19 ENSGT00940000156467.p #20 ENSGT00940000158732.w #22 ENSGT00940000155525.b ENSGT00940000163077.h ENSGT00390000000046.h ENSGT00390000007221.a.b ENSGT00390000001491.b ENSGT00940000158499.b ENSGT01050000244968.d.p ENSGT00940000156602.e ENSGT00390000017265.a.b ENSGT00940000155996.c ENSGT00940000159204.h ENSGT00940000154962.B.o.a ENSGT00940000157274 ENSGT00940000161556 ENSGT00940000166025.b.c Cyprininae_a ANCESTRAL SPECIES 494 ENSGT00940000156983.a.a.r.a #19 ENSGT00940000156467.p #20 ENSGT00940000158732.w #22 ENSGT00940000155525.b ENSGT00940000163077.h ENSGT00390000000046.h ENSGT00390000007221.a.b.q ENSGT00940000158499.a ENSGT01050000244968.d.o ENSGT00940000156602.f ENSGT00390000017265.b ENSGT00940000155996.d ENSGT00940000159204.g ENSGT00940000154962.B.o.b ENSGT00940000157274.d Golden-line barbel MODERN SPECIES 679 bcl11aa (ENSSGRG00000030561) #19 papolg (ENSSGRG00000030046) #20 rel (ENSSGRG00000030038) #22 pdlim1 (ENSSGRG00000030037) neurog3 (ENSSGRG00000030036) sgpl1 (ENSSGRG00000029205) pcbd1 (ENSSGRG00000029143) ENSSGRG00000029140 ret (ENSSGRG00000028886) csgalnact2 (ENSSGRG00000028876) sec23ip (ENSSGRG00000028472) mcmbp (ENSSGRG00000027994) inpp5f (ENSSGRG00000027963) bag3 (ENSSGRG00000027959) TIAL1 (ENSSGRG00000027638) PKD2L1 (ENSSGRG00000027637) ENSSGRG00000027636 ENSSGRG00000027635 Common carp reference MODERN SPECIES 18 ENSCCRG00000050069 CGAS (ENSCCRG00000075489) ENSCCRG00000032642 slc17a5 (ENSCCRG00000071094) ENSCCRG00000054411 ENSCCRG00000072606 ENSCCRG00000080928 ccdc85a (ENSCCRG00000032821) #12 soul2 (ENSCCRG00000032825) ENSCCRG00000067191 ENSCCRG00000076870 vrk2 (ENSCCRG00000035288) #15 fancl (ENSCCRG00000035294) #17 bcl11aa (ENSCCRG00000066550) #19 papolg (ENSCCRG00000048090) #20 rel (ENSCCRG00000048067) #22 pdlim1 (ENSCCRG00000048060) neurog3 (ENSCCRG00000048057) sgpl1 (ENSCCRG00000048047) pcbd1 (ENSCCRG00000054537) ret (ENSCCRG00000047916) csgalnact2 (ENSCCRG00000047900) sec23ip (ENSCCRG00000047654) mcmbp (ENSCCRG00000070447) inpp5f (ENSCCRG00000059458) bag3 (ENSCCRG00000001081) tial1 (ENSCCRG00000000329) ENSCCRG00000009677 ENSCCRG00000009672 atoh7 (ENSCCRG00000065383) ENSCCRG00000056336 Goldfish MODERN SPECIES 4 b3gat2 (ENSCARG00000010362) OGFRL1 (ENSCARG00000010381) asrgl1 (ENSCARG00000010412) RIMS1 (ENSCARG00000002394) ENSCARG00000004182 scdb (ENSCARG00000004189) wnt8b (ENSCARG00000004209) hif1an (ENSCARG00000004263) dnajb12a (ENSCARG00000004610) ENSCARG00000004637 scdb (ENSCARG00000004646) ENSCARG00000004679 ENSCARG00000005148 bcl11aa (ENSCARG00000005154) #19 papolg (ENSCARG00000005227) #20 rel (ENSCARG00000007396) #22 pdlim1 (ENSCARG00000007425) neurog3 (ENSCARG00000007434) sgpl1 (ENSCARG00000007537) pcbd1 (ENSCARG00000009520) ENSCARG00000009538 ret (ENSCARG00000009557) csgalnact2 (ENSCARG00000009645) ENSCARG00000009651 ENSCARG00000009656 ENSCARG00000009660 tial1 (ENSCARG00000009663) ENSCARG00000009697 calhm2.1 (ENSCARG00000009704) CALHM1 (ENSCARG00000009708) KCNQ5 (ENSCARG00000009712) Cyprininae ANCESTRAL SPECIES 159 ENSGT00940000155134.y.d ENSGT00940000155933.b.a.d ENSGT00940000163653 ENSGT01050000244827.E.g.a ENSGT00950000183029.B.i.b.b ENSGT00940000166291.b ENSGT00940000154866.B.a.d ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a.a ENSGT00940000160412.b.b ENSGT00940000157361.a.m.a #12 ENSGT00940000158042.g #15 ENSGT00390000005537.h #17 ENSGT00940000156983.a.a.r.b #19 ENSGT00940000156467.q #20 ENSGT00940000158732.x #22 ENSGT00940000155525.a ENSGT00940000163077.g ENSGT00390000000046.g Goldfish DUPLICATION Goldfish MODERN SPECIES 31 RIMS1 (ENSCARG00000010768) KCNQ5 (ENSCARG00000011671) ddx43 (ENSCARG00000013125) CGAS (ENSCARG00000013172) eef1a1a (ENSCARG00000013182) slc17a5 (ENSCARG00000013199) RIN2 (ENSCARG00000013236) SLC24A3 (ENSCARG00000013260) ENSCARG00000013295 atoh7 (ENSCARG00000013299) PKD2L1 (ENSCARG00000013302) tial1 (ENSCARG00000013382) bag3 (ENSCARG00000013429) bcl11aa (ENSCARG00000013441) #19 papolg (ENSCARG00000013523) #20 rel (ENSCARG00000014236) #22 pdlim1 (ENSCARG00000014247) neurog3 (ENSCARG00000014257) sgpl1 (ENSCARG00000014326) pcbd1 (ENSCARG00000016766) ENSCARG00000016780 ret (ENSCARG00000016835) csgalnact2 (ENSCARG00000018221) sec23ip (ENSCARG00000018268) mcmbp (ENSCARG00000019437) inpp5f (ENSCARG00000020211) bag3 (ENSCARG00000022204) tial1 (ENSCARG00000022215) PKD2L1 (ENSCARG00000022338) atoh7 (ENSCARG00000022355) ENSCARG00000022359 Goldfish MODERN SPECIES 696 rel (ENSCARG00000043173) #22 pdlim1 (ENSCARG00000043087) sgpl1 (ENSCARG00000043016) Cyprininae_a ANCESTRAL SPECIES 101 ENSGT00940000155134.y.d ENSGT00940000155933.b.a.d ENSGT00940000163653 ENSGT01050000244827.E.g.a ENSGT00950000183029.B.i.b.b ENSGT00940000166291.b ENSGT00940000154866.B.a.d ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a.a ENSGT00940000160412.b.b ENSGT00940000157361.a.m.a #12 ENSGT00940000158042.g #15 ENSGT00390000005537.h #17 ENSGT00940000156983.a.a.r.b #19 ENSGT00940000156467.q #20 ENSGT00940000158732.x #22 ENSGT00940000155525.a ENSGT00940000163077.g ENSGT00390000000046.g ENSGT00390000007221.a.b.r ENSGT00390000001491.b ENSGT00940000158499.b ENSGT01050000244968.d.p ENSGT00940000156602.e ENSGT00390000017265.a.b ENSGT00940000155996.c ENSGT00940000159204.h ENSGT00940000160482 ENSGT00940000154962.B.o.a ENSGT00940000157274.c ENSGT00940000161556 Golden-line barbel MODERN SPECIES 312 bcl11aa (ENSSGRG00000015303) #19 papolg (ENSSGRG00000013273) #20 rel (ENSSGRG00000013238) #22 pdlim1 (ENSSGRG00000013237) neurog3 (ENSSGRG00000013236) sgpl1 (ENSSGRG00000012424) pcbd1 (ENSSGRG00000012410) ENSSGRG00000012408 ret (ENSSGRG00000012407) csgalnact2 (ENSSGRG00000012405) ENSSGRG00000012404 ENSSGRG00000012403 mcmbp (ENSSGRG00000012248) inpp5f (ENSSGRG00000012151) bag3 (ENSSGRG00000012148) TIAL1 (ENSSGRG00000010579) PKD2L1 (ENSSGRG00000010531) atoh7 (ENSSGRG00000010529) Common carp reference MODERN SPECIES 48 KCNQ5 (ENSCCRG00000027387) ddx43 (ENSCCRG00000076256) CGAS (ENSCCRG00000076509) eef1a1a (ENSCCRG00000072785) slc17a5 (ENSCCRG00000073356) ENSCCRG00000081717 ENSCCRG00000080640 soul2 (ENSCCRG00000037093) ENSCCRG00000065246 ENSCCRG00000081103 ccdc85a (ENSCCRG00000037099) #12 vrk2 (ENSCCRG00000032428) #15 fancl (ENSCCRG00000032446) #17 bcl11aa (ENSCCRG00000064025) #19 papolg (ENSCCRG00000076360) #20 rel (ENSCCRG00000049637) #22 pdlim1 (ENSCCRG00000030006) sgpl1 (ENSCCRG00000015634) pcbd1 (ENSCCRG00000061538) si:dkey-192p21.6 (ENSCCRG00000060984) ret (ENSCCRG00000011287) csgalnact2 (ENSCCRG00000011272) sec23ip (ENSCCRG00000009707) mcmbp (ENSCCRG00000007459) inpp5f (ENSCCRG00000001168) tial1 (ENSCCRG00000038311) ENSCCRG00000000176 atoh7 (ENSCCRG00000074674) ENSCCRG00000000125 ENSCCRG00000079239 calhm2.1 (ENSCCRG00000079601) Zebrafish MODERN SPECIES 4 asrgl1 (ENSDARG00000021681) RIMS1 (ENSDARG00000074680) KCNQ5 (ENSDARG00000069954) ddx43 (ENSDARG00000022614) CGAS (ENSDARG00000021572) eef1a1a (ENSDARG00000039502) slc17a5 (ENSDARG00000055190) RIN2 (ENSDARG00000074589) SLC24A3 (ENSDARG00000006760) soul2 (ENSDARG00000039499) ccdc85a (ENSDARG00000039497) #12 vrk2 (ENSDARG00000021547) #15 fancl (ENSDARG00000007885) #17 bcl11aa (ENSDARG00000061352) #19 papolg (ENSDARG00000012141) #20 rel (ENSDARG00000055276) #22 pdlim1 (ENSDARG00000019845) neurog3 (ENSDARG00000016951) sgpl1 (ENSDARG00000061375) pcbd1 (ENSDARG00000031981) si:dkey-192p21.6 (ENSDARG00000091212) ret (ENSDARG00000055305) csgalnact2 (ENSDARG00000061400) sec23ip (ENSDARG00000061413) mcmbp (ENSDARG00000055314) inpp5f (ENSDARG00000061437) bag3 (ENSDARG00000039486) tial1 (ENSDARG00000009525) PKD2L1 (ENSDARG00000022503) atoh7 (ENSDARG00000069552) ENSDARG00000039483 Clupeiformes ANCESTRAL SPECIES 8 ENSGT00390000014549 ENSGT00530000063727.A ENSGT00390000006619 ENSGT00940000163420 ENSGT00940000155483.f ENSGT00390000015299.a.b.b.b.d.a ENSGT00530000063557.b ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000158042 #15 ENSGT00390000005537 #17 ENSGT00940000156983.a.a.r #19 ENSGT00940000156467 #20 ENSGT00940000158732 #22 ENSGT00390000016883 #26 ENSGT00390000008178 #27 ENSGT00940000153408.B.t #31 ENSGT00940000157824.i.b #35 ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.r ENSGT00940000153464.B.z.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000154186.a.q ENSGT00940000155337.ab ENSGT00530000063867.b.b Denticle herring MODERN SPECIES 18 morn2 (ENSDCDG00000022622) ENSDCDG00000022620 MAP4K3 (ENSDCDG00000022418) ENSDCDG00000022410 RIN2 (ENSDCDG00000022405) ENSDCDG00000022401 SLC24A3 (ENSDCDG00000022286) soul2 (ENSDCDG00000022285) ccdc85a (ENSDCDG00000022284) #12 vrk2 (ENSDCDG00000022282) #15 fancl (ENSDCDG00000022247) #17 ENSDCDG00000022243 ENSDCDG00000022240 bcl11aa (ENSDCDG00000022234) #19 papolg (ENSDCDG00000016269) #20 rel (ENSDCDG00000016031) #22 pex13 (ENSDCDG00000016023) #26 SANBR (ENSDCDG00000015943) #27 XPO1 (ENSDCDG00000015851) #31 ENSDCDG00000015816 #35 b3gnt2b (ENSDCDG00000015811) EHBP1 (ENSDCDG00000015700) otx1 (ENSDCDG00000015687) WDPCP (ENSDCDG00000015075) mdh1ab (ENSDCDG00000015055) ENSDCDG00000015051 ugp2b (ENSDCDG00000014366) peli1b (ENSDCDG00000014302) ENSDCDG00000014232 ENSDCDG00000014166 ENSDCDG00000014146 Atlantic herring MODERN SPECIES 4 fam149b1 (ENSCHAG00000012751) morn2 (ENSCHAG00000012725) RIN2 (ENSCHAG00000012674) MAP4K3 (ENSCHAG00000010211) ENSCHAG00000010121 RIN2 (ENSCHAG00000010003) ENSCHAG00000009989 ENSCHAG00000009404 ENSCHAG00000009372 soul2 (ENSCHAG00000009362) ccdc85a (ENSCHAG00000009349) #12 vrk2 (ENSCHAG00000009283) #15 fancl (ENSCHAG00000009225) #17 bcl11aa (ENSCHAG00000009178) #19 papolg (ENSCHAG00000003904) #20 rel (ENSCHAG00000003607) #22 pex13 (ENSCHAG00000003593) #26 SANBR (ENSCHAG00000003275) #27 XPO1 (ENSCHAG00000002294) #31 ENSCHAG00000002206 b3gnt2b (ENSCHAG00000002175) b3gnt2b (ENSCHAG00000002172) EHBP1 (ENSCHAG00000001812) otx1 (ENSCHAG00000001784) WDPCP (ENSCHAG00000001434) mdh1ab (ENSCHAG00000000940) ENSCHAG00000000462 ENSCHAG00000019202 ugp2b (ENSCHAG00000018928) peli1b (ENSCHAG00000018837) ENSCHAG00000018691 Spotted gar MODERN SPECIES 654 KCNQ5 (ENSLOCG00000016173) ddx43 (ENSLOCG00000016170) CGAS (ENSLOCG00000016169) eef1a1b (ENSLOCG00000016168) slc17a5 (ENSLOCG00000016166) RIN2 (ENSLOCG00000016163) SLC24A3 (ENSLOCG00000016155) dtd1 (ENSLOCG00000016152) sec23b (ENSLOCG00000016145) ENSLOCG00000016143 ccdc85a (ENSLOCG00000016142) #12 vrk2 (ENSLOCG00000016138) #15 fancl (ENSLOCG00000016137) #17 bcl11aa (ENSLOCG00000016135) #19 papolg (ENSLOCG00000016130) #20 rel (ENSLOCG00000016127) #22 pus10 (ENSLOCG00000016123) #24 pex13 (ENSLOCG00000016122) #26 SANBR (ENSLOCG00000016119) #27 ENSLOCG00000016117 ENSLOCG00000016116 ENSLOCG00000016115 USP34 (ENSLOCG00000016101) #30 XPO1 (ENSLOCG00000016095) #31 ENSLOCG00000016094 ENSLOCG00000016093 FAM161A (ENSLOCG00000016091) #35 cct4 (ENSLOCG00000016088) #36 commd1 (ENSLOCG00000016086) #37 b3gnt2a (ENSLOCG00000016084) ENSLOCG00000016082 Reedfish MODERN SPECIES 6 ARFGEF3 (ENSECRG00000013278) COX20 (ENSECRG00000021977) ENSECRG00000021971 desi2 (ENSECRG00000021939) PPP4R3C (ENSECRG00000021906) #7 PNPT1 (ENSECRG00000021823) #8 ENSECRG00000021808 EFEMP1 (ENSECRG00000021047) #10 ENSECRG00000020968 ccdc85a (ENSECRG00000020939) #12 ENSECRG00000020918 vrk2 (ENSECRG00000020854) #15 fancl (ENSECRG00000020815) #17 bcl11aa (ENSECRG00000020774) #19 papolg (ENSECRG00000020728) #20 rel (ENSECRG00000020700) #22 ENSECRG00000020676 #24 ENSECRG00000020656 pex13 (ENSECRG00000020640) #26 SANBR (ENSECRG00000020613) #27 ENSECRG00000020605 USP34 (ENSECRG00000020472) #30 dnaaf10 (ENSECRG00000020385) pno1 (ENSECRG00000020369) ints9 (ENSECRG00000020351) c1d (ENSECRG00000020336) ENSECRG00000020320 meis1b (ENSECRG00000020236) spred2b (ENSECRG00000020195) ACTR2 (ENSECRG00000020143) zgc:153169 (ENSECRG00000020103) Elephant shark MODERN SPECIES 1508 ENSCMIG00000003636 rps27a (ENSCMIG00000003625) mtif2 (ENSCMIG00000003573) ENSCMIG00000003553 ENSCMIG00000003503 CCDC88A (ENSCMIG00000003408) PPP4R3C (ENSCMIG00000003346) #7 ENSCMIG00000003322 PNPT1 (ENSCMIG00000003245) #8 EFEMP1 (ENSCMIG00000003124) #10 ccdc85a (ENSCMIG00000003088) #12 ENSCMIG00000003085 #15 fancl (ENSCMIG00000003084) #17 bcl11aa (ENSCMIG00000003083) #19 papolg (ENSCMIG00000002931) #20 rel (ENSCMIG00000002772) #22 pus10 (ENSCMIG00000002725) #24 SANBR (ENSCMIG00000002686) #27 USP34 (ENSCMIG00000002560) #30 FAM161A (ENSCMIG00000002520) #35 cct4 (ENSCMIG00000002389) #36 commd1 (ENSCMIG00000002319) #37 b3gnt2a (ENSCMIG00000002317) ENSCMIG00000002311 ENSCMIG00000002307 EHBP1 (ENSCMIG00000002230) WDPCP (ENSCMIG00000002187) mdh1 (ENSCMIG00000002025) ugp2 (ENSCMIG00000001606) vps54 (ENSCMIG00000001326) PELI1 (ENSCMIG00000001287) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES 135 ENSGT00940000156467 #20 ENSGT00940000158732.y #22 ENSGT00390000007529 #24 Hagfish DUPLICATION Hagfish MODERN SPECIES 661 ENSEBUG00000007852 MPPED2 (ENSEBUG00000005968) ENSEBUG00000006041 #22 ENSEBUG00000001001 #35 ENSEBUG00000012275 ENSEBUG00000006115 ENSEBUG00000007796 Hagfish MODERN SPECIES 1371 ENSEBUG00000013568 ENSEBUG00000009726 ENSEBUG00000005042 #20 ENSEBUG00000014334 #22 ENSEBUG00000001189 #24 ENSEBUG00000011380 ENSEBUG00000001559 ATL2 (ENSEBUG00000015077) arf6a (ENSEBUG00000004811) ENSEBUG00000003580 ENSEBUG00000015856 sos2 (ENSEBUG00000003137) ENSEBUG00000016053 ENSEBUG00000003133 ENSEBUG00000013719 ENSEBUG00000003495 ENSEBUG00000007625 ENSEBUG00000014486 Cyclostomata ANCESTRAL SPECIES ENSGT00940000158732.z #22 Lamprey MODERN SPECIES 138 ENSPMAG00000005912 ENSPMAG00000005859 ENSPMAG00000005835 ENSPMAG00000005820 #22 dph6 (ENSPMAG00000005810) drap1 (ENSPMAG00000005794) ENSPMAG00000005789 GPR135 (ENSPMAG00000005785) PC (ENSPMAG00000005777) ENSPMAG00000005742 ENSPMAG00000005733 ENSPMAG00000005705 nap1l1 (ENSPMAG00000005613) ENSPMAG00000005605 ENSPMAG00000005505 ENSPMAG00000005476 ENSPMAG00000005472 ENSPMAG00000005423 bms1 (ENSPMAG00000005401) Hagfish MODERN SPECIES 149 cops9 (ENSEBUG00000012240) ENSEBUG00000004848 ENSEBUG00000014469 ENSEBUG00000008272 ENSEBUG00000006966 vcla (ENSEBUG00000001751) ENSEBUG00000001618 ENSEBUG00000012809 ENSEBUG00000014090 ENSEBUG00000004241 #22 ENSEBUG00000003650 SRSF7 (ENSEBUG00000004912) ENSEBUG00000002973 ENSEBUG00000008335 ENSEBUG00000002496 ENSEBUG00000003182