Amniota	ANCESTRAL SPECIES	10	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Theria	ANCESTRAL SPECIES	26	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.a.a ##13	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Glires	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Rodentia	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Sciuridae	ANCESTRAL SPECIES	21	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Marmotini	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Marmotini_b	ANCESTRAL SPECIES	76	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409.e
Arctic ground squirrel	MODERN SPECIES	373							NOLC1 (ENSUPAG00010009783) #13	PPRC1 (ENSUPAG00010009814) #14	ENSUPAG00010009826 #15	HPS6 (ENSUPAG00010009845) #16	ARMH3 (ENSUPAG00010009848) #17	KCNIP2 (ENSUPAG00010009866) #18	OGA (ENSUPAG00010010052) #19	NPM3 (ENSUPAG00010010073) #20	FGF8 (ENSUPAG00010010083) #21	FBXW4 (ENSUPAG00010010202) #22	DPCD (ENSUPAG00010010220) #23	POLL (ENSUPAG00010010241) #24	BTRC (ENSUPAG00010010245) #25	ENSUPAG00010010321 #26	LBX1 (ENSUPAG00010010328) #27	TLX1 (ENSUPAG00010010336) #28	KAZALD1 (ENSUPAG00010010340) #29	SFXN3 (ENSUPAG00010010359) #30	ENSUPAG00010010444 #31	ENSUPAG00010010561 #32	LZTS2 (ENSUPAG00010010572) #33	TWNK (ENSUPAG00010010588) #34	MRPL43 (ENSUPAG00010010598) #35	SEMA4G (ENSUPAG00010010602) #36	SLF2 (ENSUPAG00010010631) #37
Squirrel	MODERN SPECIES	200	PSD (ENSSTOG00000021577)	NFKB2 (ENSSTOG00000002191)	GBF1 (ENSSTOG00000002171)	PITX3 (ENSSTOG00000015025)	ELOVL3 (ENSSTOG00000015013)	NOLC1 (ENSSTOG00000002168) #13	ENSSTOG00000002156 #14	ENSSTOG00000034359 #14	LDB1 (ENSSTOG00000002139) #15	HPS6 (ENSSTOG00000024918) #16	ARMH3 (ENSSTOG00000015633) #17	KCNIP2 (ENSSTOG00000021030) #18	ENSSTOG00000032901 #19	NPM3 (ENSSTOG00000022621) #20	FGF8 (ENSSTOG00000023351) #21	FBXW4 (ENSSTOG00000011495) #22	DPCD (ENSSTOG00000011490) #23	POLL (ENSSTOG00000011485) #24	BTRC (ENSSTOG00000022481) #25	LBX1 (ENSSTOG00000006491) #27	ENSSTOG00000023842 #28	KAZALD1 (ENSSTOG00000015240) #29	SFXN3 (ENSSTOG00000026614) #30	PDZD7 (ENSSTOG00000009046) #32	LZTS2 (ENSSTOG00000015232) #33	TWNK (ENSSTOG00000009030) #34	MRPL43 (ENSSTOG00000009016) #35	SEMA4G (ENSSTOG00000008994) #36	SLF2 (ENSSTOG00000008951) #37	PAX2 (ENSSTOG00000011575)	ENSSTOG00000009302
Alpin marmot	MODERN SPECIES	39	ENSMMMG00000023315	ENSMMMG00000023312	NFKB2 (ENSMMMG00000023297)	GBF1 (ENSMMMG00000023283)	PITX3 (ENSMMMG00000023281)	ELOVL3 (ENSMMMG00000023279)	NOLC1 (ENSMMMG00000023274) #13	PPRC1 (ENSMMMG00000023259) #14	LDB1 (ENSMMMG00000023248) #15	HPS6 (ENSMMMG00000023243) #16	ARMH3 (ENSMMMG00000023233) #17	KCNIP2 (ENSMMMG00000023225) #18	OGA (ENSMMMG00000023220) #19	NPM3 (ENSMMMG00000023217) #20	FGF8 (ENSMMMG00000023215) #21	FBXW4 (ENSMMMG00000023212) #22	DPCD (ENSMMMG00000023210) #23	POLL (ENSMMMG00000023200) #24	BTRC (ENSMMMG00000023182) #25	LBX1 (ENSMMMG00000023177) #27	ENSMMMG00000023172 #28	KAZALD1 (ENSMMMG00000023167) #29	SFXN3 (ENSMMMG00000023149) #30	ENSMMMG00000023146	ENSMMMG00000023144 #32	ENSMMMG00000023099 #32	ENSMMMG00000023095 #33	TWNK (ENSMMMG00000023092) #34	MRPL43 (ENSMMMG00000023087) #35	SEMA4G (ENSMMMG00000023078) #36	SLF2 (ENSMMMG00000023066) #37
Eurasian red squirrel	MODERN SPECIES	13	CUEDC2 (ENSSVLG00005004017)	FBXL15 (ENSSVLG00005004039)	PSD (ENSSVLG00005004064)	NFKB2 (ENSSVLG00005004099)	GBF1 (ENSSVLG00005004145)	PITX3 (ENSSVLG00005004181)	ELOVL3 (ENSSVLG00005004199)	NOLC1 (ENSSVLG00005004225) #13	PPRC1 (ENSSVLG00005004252) #14	LDB1 (ENSSVLG00005004323) #15	HPS6 (ENSSVLG00005004366) #16	ARMH3 (ENSSVLG00005004399) #17	KCNIP2 (ENSSVLG00005004570) #18	OGA (ENSSVLG00005004824) #19	FGF8 (ENSSVLG00005005038) #21	FBXW4 (ENSSVLG00005005056) #22	DPCD (ENSSVLG00005005104) #23	POLL (ENSSVLG00005005135) #24	BTRC (ENSSVLG00005005205) #25	LBX1 (ENSSVLG00005005245) #27	TLX1 (ENSSVLG00005005266) #28	KAZALD1 (ENSSVLG00005005289) #29	SFXN3 (ENSSVLG00005005315) #30	PDZD7 (ENSSVLG00005005347) #32	LZTS2 (ENSSVLG00005005380) #33	TWNK (ENSSVLG00005005412) #34	MRPL43 (ENSSVLG00005005460) #35	SEMA4G (ENSSVLG00005005503) #36	SLF2 (ENSSVLG00005005553) #37	PAX2 (ENSSVLG00005005719)	HIF1AN (ENSSVLG00005005917)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Long-tailed chinchilla	MODERN SPECIES	192	CUEDC2 (ENSCLAG00000001551)	FBXL15 (ENSCLAG00000001578)	PSD (ENSCLAG00000003741)	NFKB2 (ENSCLAG00000004104)	GBF1 (ENSCLAG00000004338)	PITX3 (ENSCLAG00000005073)	ELOVL3 (ENSCLAG00000005342)	NOLC1 (ENSCLAG00000001046) #13	PPRC1 (ENSCLAG00000001364) #14	LDB1 (ENSCLAG00000001555) #15	HPS6 (ENSCLAG00000001624) #16	ARMH3 (ENSCLAG00000001673) #17	KCNIP2 (ENSCLAG00000000954) #18	OGA (ENSCLAG00000001003) #19	FGF8 (ENSCLAG00000001075) #21	FBXW4 (ENSCLAG00000001132) #22	DPCD (ENSCLAG00000001147) #23	POLL (ENSCLAG00000001165) #24	BTRC (ENSCLAG00000001243) #25	LBX1 (ENSCLAG00000001298) #27	ENSCLAG00000001309 #28	ENSCLAG00000001318 #29	SFXN3 (ENSCLAG00000001996) #30	PDZD7 (ENSCLAG00000003178) #32	LZTS2 (ENSCLAG00000003292) #33	TWNK (ENSCLAG00000003486) #34	MRPL43 (ENSCLAG00000003510) #35	SEMA4G (ENSCLAG00000003839) #36	SLF2 (ENSCLAG00000003936) #37	PAX2 (ENSCLAG00000007272)	HIF1AN (ENSCLAG00000008195)
Degu	MODERN SPECIES	83	PITX3 (ENSODEG00000007162)	ELOVL3 (ENSODEG00000006606)	NOLC1 (ENSODEG00000006304) #13	ENSODEG00000006985 #14	ENSODEG00000009568 #14	LDB1 (ENSODEG00000009090) #15	HPS6 (ENSODEG00000007638) #16	ENSODEG00000019424	ARMH3 (ENSODEG00000007299) #17	ENSODEG00000010569	KCNIP2 (ENSODEG00000007199) #18	ENSODEG00000019634	OGA (ENSODEG00000008001) #19	NPM3 (ENSODEG00000006704) #20	FGF8 (ENSODEG00000006423) #21	FBXW4 (ENSODEG00000007897) #22	DPCD (ENSODEG00000005983) #23	POLL (ENSODEG00000007469) #24	BTRC (ENSODEG00000008464) #25	LBX1 (ENSODEG00000006684) #27	ENSODEG00000006094 #28	KAZALD1 (ENSODEG00000005804) #29	SFXN3 (ENSODEG00000007542) #30	PDZD7 (ENSODEG00000006718) #32	LZTS2 (ENSODEG00000006752) #33	TWNK (ENSODEG00000006072) #34	ENSODEG00000006668 #35	SEMA4G (ENSODEG00000005984) #36	SLF2 (ENSODEG00000008647) #37	PAX2 (ENSODEG00000006975)	ENSODEG00000007007
Guinea pig	MODERN SPECIES	11	FBXL15 (ENSCPOG00000021451)	PSD (ENSCPOG00000000156)	NFKB2 (ENSCPOG00000004847)	GBF1 (ENSCPOG00000004514)	PITX3 (ENSCPOG00000036365)	ELOVL3 (ENSCPOG00000014884)	NOLC1 (ENSCPOG00000004504) #13	PPRC1 (ENSCPOG00000032149) #14	LDB1 (ENSCPOG00000010311) #15	HPS6 (ENSCPOG00000006084) #16	ARMH3 (ENSCPOG00000031847) #17	KCNIP2 (ENSCPOG00000011918) #18	OGA (ENSCPOG00000000219) #19	NPM3 (ENSCPOG00000006301) #20	FGF8 (ENSCPOG00000021533) #21	ENSCPOG00000032448 #22	DPCD (ENSCPOG00000005499) #23	POLL (ENSCPOG00000005493) #24	BTRC (ENSCPOG00000005488) #25	LBX1 (ENSCPOG00000025830) #27	TLX1 (ENSCPOG00000003194) #28	KAZALD1 (ENSCPOG00000015270) #29	SFXN3 (ENSCPOG00000000955) #30	ENSCPOG00000000952 #32	LZTS2 (ENSCPOG00000035545) #33	TWNK (ENSCPOG00000000950) #34	MRPL43 (ENSCPOG00000040768) #35	SEMA4G (ENSCPOG00000036564) #36	SLF2 (ENSCPOG00000000940) #37	PAX2 (ENSCPOG00000000939)	HIF1AN (ENSCPOG00000009881)
Naked mole-rat female	MODERN SPECIES	4	GBF1 (ENSHGLG00000002115)	ENSHGLG00000042455	PITX3 (ENSHGLG00000001851)	ELOVL3 (ENSHGLG00000003511)	ENSHGLG00000049553	NOLC1 (ENSHGLG00000003156) #13	PPRC1 (ENSHGLG00000002783) #14	LDB1 (ENSHGLG00000002254) #15	HPS6 (ENSHGLG00000020621) #16	ARMH3 (ENSHGLG00000002014) #17	ENSHGLG00000043110 #17	KCNIP2 (ENSHGLG00000019185) #18	OGA (ENSHGLG00000019033) #19	NPM3 (ENSHGLG00000049984) #20	FGF8 (ENSHGLG00000013482) #21	FBXW4 (ENSHGLG00000018911) #22	DPCD (ENSHGLG00000019507) #23	POLL (ENSHGLG00000019504) #24	ENSHGLG00000002588 #25	ENSHGLG00000019498	LBX1 (ENSHGLG00000047414) #27	TLX1 (ENSHGLG00000001823) #28	KAZALD1 (ENSHGLG00000002854) #29	SFXN3 (ENSHGLG00000002107) #30	PDZD7 (ENSHGLG00000046047) #32	ENSHGLG00000035111 #32	LZTS2 (ENSHGLG00000039393) #33	ENSHGLG00000002240 #34	ENSHGLG00000040204 #35	SLF2 (ENSHGLG00000011302) #37	ENSHGLG00000033080
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Kangaroo rat	MODERN SPECIES	355	Nfkb2 (ENSDORG00000013409)	ENSDORG00000013406	ENSDORG00000024842	Pitx3 (ENSDORG00000023993)	Elovl3 (ENSDORG00000027255)	Nolc1 (ENSDORG00000001056) #13	Pprc1 (ENSDORG00000001046) #14	Ldb1 (ENSDORG00000003498) #15	Hps6 (ENSDORG00000028123) #16	ENSDORG00000023337	Armh3 (ENSDORG00000003496) #17	Kcnip2 (ENSDORG00000003495) #18	Oga (ENSDORG00000003493) #19	Npm3 (ENSDORG00000003491) #20	Fgf8 (ENSDORG00000029227) #21	Fbxw4 (ENSDORG00000014212) #22	Dpcd (ENSDORG00000014209) #23	Poll (ENSDORG00000024173) #24	Btrc (ENSDORG00000014204) #25	Lbx1 (ENSDORG00000029567) #27	ENSDORG00000025952 #28	Kazald1 (ENSDORG00000016417) #29	Sfxn3 (ENSDORG00000016415) #30	ENSDORG00000016413 #32	Lzts2 (ENSDORG00000016411) #33	Twnk (ENSDORG00000004461) #34	Mrpl43 (ENSDORG00000023986) #35	Sema4g (ENSDORG00000004459) #36	Slf2 (ENSDORG00000004458) #37	Pax2 (ENSDORG00000006193)	Hif1an (ENSDORG00000026469)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000018772	ENSJJAG00000010788	ENSJJAG00000023637	Pitx3 (ENSJJAG00000020721)	Elovl3 (ENSJJAG00000020437)	Nolc1 (ENSJJAG00000021131) #13	ENSJJAG00000005177 #14	ENSJJAG00000024088 #14	Ldb1 (ENSJJAG00000012307) #15	Hps6 (ENSJJAG00000011662) #16	Armh3 (ENSJJAG00000018861) #17	Kcnip2 (ENSJJAG00000019358) #18	Oga (ENSJJAG00000020565) #19	Npm3 (ENSJJAG00000018907) #20	Fgf8 (ENSJJAG00000014440) #21	ENSJJAG00000016263 #22	Dpcd (ENSJJAG00000010119) #23	Poll (ENSJJAG00000024104) #24	Btrc (ENSJJAG00000011813) #25	Lbx1 (ENSJJAG00000021756) #27	ENSJJAG00000006430 #28	Kazald1 (ENSJJAG00000021687) #29	Sfxn3 (ENSJJAG00000016145) #30	ENSJJAG00000014285 #32	Lzts2 (ENSJJAG00000015056) #33	ENSJJAG00000006388 #34	Mrpl43 (ENSJJAG00000023922) #35	Sema4g (ENSJJAG00000000673) #36	Slf2 (ENSJJAG00000023625) #37	Pax2 (ENSJJAG00000000526)	Hif1an (ENSJJAG00000013793)
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300	Psd (ENSNGAG00000011541)	Nfkb2 (ENSNGAG00000022988)	Gbf1 (ENSNGAG00000006095)	Pitx3 (ENSNGAG00000021500)	Elovl3 (ENSNGAG00000013825)	Nolc1 (ENSNGAG00000024139) #13	Pprc1 (ENSNGAG00000016516) #14	Ldb1 (ENSNGAG00000024157) #15	ENSNGAG00000021169	Hps6 (ENSNGAG00000012214) #16	Armh3 (ENSNGAG00000023147) #17	Kcnip2 (ENSNGAG00000024132) #18	Oga (ENSNGAG00000011804) #19	ENSNGAG00000022833 #20	Fgf8 (ENSNGAG00000018999) #21	Fbxw4 (ENSNGAG00000022749) #22	Dpcd (ENSNGAG00000015959) #23	Poll (ENSNGAG00000021402) #24	Btrc (ENSNGAG00000001803) #25	ENSNGAG00000023625	Lbx1 (ENSNGAG00000023979) #27	Tlx1 (ENSNGAG00000024255) #28	Kazald1 (ENSNGAG00000011414) #29	Sfxn3 (ENSNGAG00000017442) #30	ENSNGAG00000004602 #32	Lzts2 (ENSNGAG00000023942) #33	Twnk (ENSNGAG00000023645) #34	Mrpl43 (ENSNGAG00000023476) #35	Sema4g (ENSNGAG00000014131) #36	Slf2 (ENSNGAG00000022141) #37	Pax2 (ENSNGAG00000011967)
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Murinae	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Mus	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.p #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.p #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.p #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
spretus	MODERN SPECIES	10	Fbxl15 (MGP_SPRETEiJ_G0023954)	Psd (MGP_SPRETEiJ_G0023953)	Nfkb2 (MGP_SPRETEiJ_G0023952)	Gbf1 (MGP_SPRETEiJ_G0023951)	Pitx3 (MGP_SPRETEiJ_G0023950)	Elovl3 (MGP_SPRETEiJ_G0023949)	Nolc1 (MGP_SPRETEiJ_G0023948) #13	Pprc1 (MGP_SPRETEiJ_G0023947) #14	Ldb1 (MGP_SPRETEiJ_G0023946) #15	Hps6 (MGP_SPRETEiJ_G0023945) #16	Armh3 (MGP_SPRETEiJ_G0023944) #17	Kcnip2 (MGP_SPRETEiJ_G0023943) #18	Oga (MGP_SPRETEiJ_G0023942) #19	Npm3 (MGP_SPRETEiJ_G0023941) #20	Fgf8 (MGP_SPRETEiJ_G0023940) #21	MGP_SPRETEiJ_G0023939 #22	Dpcd (MGP_SPRETEiJ_G0023938) #23	Poll (MGP_SPRETEiJ_G0023937) #24	Btrc (MGP_SPRETEiJ_G0023936) #25	Lbx1 (MGP_SPRETEiJ_G0023935) #27	Tlx1 (MGP_SPRETEiJ_G0023934) #28	Kazald1 (MGP_SPRETEiJ_G0023933) #29	Sfxn3 (MGP_SPRETEiJ_G0023932) #30	Pdzd7 (MGP_SPRETEiJ_G0023931) #32	Lzts2 (MGP_SPRETEiJ_G0023930) #33	Twnk (MGP_SPRETEiJ_G0023929) #34	Mrpl43 (MGP_SPRETEiJ_G0023928) #35	Sema4g (MGP_SPRETEiJ_G0023927) #36	Slf2 (MGP_SPRETEiJ_G0023926) #37	Pax2 (MGP_SPRETEiJ_G0023925)	Hif1an (MGP_SPRETEiJ_G0023924)
Steppe mouse	MODERN SPECIES	3317	Fbxl15 (ENSMSIG00000011465)	Psd (ENSMSIG00000011495)	Nfkb2 (ENSMSIG00000011557)	Gbf1 (ENSMSIG00000011585)	Pitx3 (ENSMSIG00000011679)	Elovl3 (ENSMSIG00000011691)	Nolc1 (ENSMSIG00000011702) #13	Pprc1 (ENSMSIG00000011750) #14	Ldb1 (ENSMSIG00000011766) #15	Hps6 (ENSMSIG00000011802) #16	Armh3 (ENSMSIG00000011813) #17	ENSMSIG00000011884 #18	Oga (ENSMSIG00000012429) #19	Npm3 (ENSMSIG00000012497) #20	Fgf8 (ENSMSIG00000012521) #21	ENSMSIG00000012591 #22	ENSMSIG00000012629 #23	Poll (ENSMSIG00000012645) #24	Btrc (ENSMSIG00000012680) #25	Lbx1 (ENSMSIG00000012769) #27	Tlx1 (ENSMSIG00000012781) #28	Kazald1 (ENSMSIG00000012802) #29	Sfxn3 (ENSMSIG00000012828) #30	Pdzd7 (ENSMSIG00000012912) #32	ENSMSIG00000012980	Lzts2 (ENSMSIG00000012984) #33	Twnk (ENSMSIG00000013010) #34	Mrpl43 (ENSMSIG00000013030) #35	Sema4g (ENSMSIG00000013048) #36	Slf2 (ENSMSIG00000013125) #37	Pax2 (ENSMSIG00000013194)
Mouse	MODERN SPECIES	10	Fbxl15 (ENSMUSG00000025226)	Psd (ENSMUSG00000037126)	Nfkb2 (ENSMUSG00000025225)	Gbf1 (ENSMUSG00000025224)	Pitx3 (ENSMUSG00000025229)	Elovl3 (ENSMUSG00000038754)	Nolc1 (ENSMUSG00000015176) #13	Pprc1 (ENSMUSG00000055491) #14	Ldb1 (ENSMUSG00000025223) #15	Hps6 (ENSMUSG00000074811) #16	Armh3 (ENSMUSG00000039901) #17	Kcnip2 (ENSMUSG00000025221) #18	Oga (ENSMUSG00000025220) #19	Npm3 (ENSMUSG00000056209) #20	Fgf8 (ENSMUSG00000025219) #21	Fbxw4 (ENSMUSG00000040913) #22	Dpcd (ENSMUSG00000041035) #23	Poll (ENSMUSG00000025218) #24	Btrc (ENSMUSG00000025217) #25	Lbx1 (ENSMUSG00000025216) #27	Tlx1 (ENSMUSG00000025215) #28	Kazald1 (ENSMUSG00000025213) #29	Sfxn3 (ENSMUSG00000025212) #30	Pdzd7 (ENSMUSG00000074818) #32	Lzts2 (ENSMUSG00000035342) #33	Twnk (ENSMUSG00000025209) #34	Mrpl43 (ENSMUSG00000025208) #35	Sema4g (ENSMUSG00000025207) #36	Slf2 (ENSMUSG00000036097) #37	Pax2 (ENSMUSG00000004231)	Hif1an (ENSMUSG00000036450)
Ryukyu mouse	MODERN SPECIES	10	Fbxl15 (MGP_CAROLIEiJ_G0023033)	Psd (MGP_CAROLIEiJ_G0023032)	Nfkb2 (MGP_CAROLIEiJ_G0023031)	Gbf1 (MGP_CAROLIEiJ_G0023030)	Pitx3 (MGP_CAROLIEiJ_G0023029)	Elovl3 (MGP_CAROLIEiJ_G0023028)	Nolc1 (MGP_CAROLIEiJ_G0023027) #13	Pprc1 (MGP_CAROLIEiJ_G0023026) #14	Ldb1 (MGP_CAROLIEiJ_G0023025) #15	Hps6 (MGP_CAROLIEiJ_G0023024) #16	Armh3 (MGP_CAROLIEiJ_G0023023) #17	Kcnip2 (MGP_CAROLIEiJ_G0023022) #18	Oga (MGP_CAROLIEiJ_G0023021) #19	Npm3 (MGP_CAROLIEiJ_G0023020) #20	Fgf8 (MGP_CAROLIEiJ_G0023019) #21	Fbxw4 (MGP_CAROLIEiJ_G0023018) #22	Dpcd (MGP_CAROLIEiJ_G0023017) #23	Poll (MGP_CAROLIEiJ_G0023016) #24	Btrc (MGP_CAROLIEiJ_G0023015) #25	Lbx1 (MGP_CAROLIEiJ_G0023014) #27	Tlx1 (MGP_CAROLIEiJ_G0023013) #28	Kazald1 (MGP_CAROLIEiJ_G0023012) #29	Sfxn3 (MGP_CAROLIEiJ_G0023011) #30	Pdzd7 (MGP_CAROLIEiJ_G0023010) #32	Lzts2 (MGP_CAROLIEiJ_G0023009) #33	Twnk (MGP_CAROLIEiJ_G0023008) #34	Mrpl43 (MGP_CAROLIEiJ_G0023007) #35	Sema4g (MGP_CAROLIEiJ_G0023006) #36	Slf2 (MGP_CAROLIEiJ_G0023005) #37	Pax2 (MGP_CAROLIEiJ_G0023004)	Hif1an (MGP_CAROLIEiJ_G0023003)
Shrew mouse	MODERN SPECIES		Fbxl15 (MGP_PahariEiJ_G0014523)	Psd (MGP_PahariEiJ_G0014522)	Nfkb2 (MGP_PahariEiJ_G0014521)	Gbf1 (MGP_PahariEiJ_G0014520)	Pitx3 (MGP_PahariEiJ_G0014519)	Elovl3 (MGP_PahariEiJ_G0014518)	Nolc1 (MGP_PahariEiJ_G0014517) #13	Pprc1 (MGP_PahariEiJ_G0014516) #14	Ldb1 (MGP_PahariEiJ_G0014515) #15	Hps6 (MGP_PahariEiJ_G0014514) #16	Armh3 (MGP_PahariEiJ_G0014513) #17	Kcnip2 (MGP_PahariEiJ_G0014512) #18	Oga (MGP_PahariEiJ_G0014511) #19	Npm3 (MGP_PahariEiJ_G0014510) #20	Fgf8 (MGP_PahariEiJ_G0014509) #21	MGP_PahariEiJ_G0014508 #22	Dpcd (MGP_PahariEiJ_G0014507) #23	Poll (MGP_PahariEiJ_G0014506) #24	Btrc (MGP_PahariEiJ_G0014505) #25	Lbx1 (MGP_PahariEiJ_G0014504) #27	Tlx1 (MGP_PahariEiJ_G0014503) #28	Kazald1 (MGP_PahariEiJ_G0014502) #29	Sfxn3 (MGP_PahariEiJ_G0014501) #30	Pdzd7 (MGP_PahariEiJ_G0014500) #32	MGP_PahariEiJ_G0014499 #33	Twnk (MGP_PahariEiJ_G0014498) #34	Mrpl43 (MGP_PahariEiJ_G0014497) #35	Sema4g (MGP_PahariEiJ_G0014496) #36	Slf2 (MGP_PahariEiJ_G0014495) #37	Pax2 (MGP_PahariEiJ_G0014494)	Hif1an (MGP_PahariEiJ_G0014493)
Rat	MODERN SPECIES		Fbxl15 (ENSRNOG00000019509)	Psd (ENSRNOG00000019435)	Nfkb2 (ENSRNOG00000019311)	Gbf1 (ENSRNOG00000026048)	Pitx3 (ENSRNOG00000019194)	Elovl3 (ENSRNOG00000019124)	Nolc1 (ENSRNOG00000018704) #13	Pprc1 (ENSRNOG00000018561) #14	Ldb1 (ENSRNOG00000018468) #15	Hps6 (ENSRNOG00000018433) #16	Armh3 (ENSRNOG00000025523) #17	Kcnip2 (ENSRNOG00000018018) #18	Oga (ENSRNOG00000017822) #19	Npm3 (ENSRNOG00000017622) #20	Fgf8 (ENSRNOG00000017524) #21	Fbxw4 (ENSRNOG00000046211) #22	Dpcd (ENSRNOG00000017241) #23	Poll (ENSRNOG00000016748) #24	Btrc (ENSRNOG00000016280) #25	Lbx1 (ENSRNOG00000025520) #27	Tlx1 (ENSRNOG00000016120) #28	Kazald1 (ENSRNOG00000016058) #29	Sfxn3 (ENSRNOG00000015442) #30	Pdzd7 (ENSRNOG00000032946) #32	Lzts2 (ENSRNOG00000014969) #33	Twnk (ENSRNOG00000014935) #34	Mrpl43 (ENSRNOG00000014890) #35	Sema4g (ENSRNOG00000014650) #36	AC121209.1 (ENSRNOG00000036588)	Slf2 (ENSRNOG00000014482) #37	Pax2 (ENSRNOG00000014253)
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Northern American deer mouse	MODERN SPECIES		Fbxl15 (ENSPEMG00000012550)	Psd (ENSPEMG00000010757)	Nfkb2 (ENSPEMG00000014947)	Gbf1 (ENSPEMG00000018772)	Pitx3 (ENSPEMG00000026373)	Elovl3 (ENSPEMG00000000778)	ENSPEMG00000026626	Pprc1 (ENSPEMG00000016590) #14	Ldb1 (ENSPEMG00000011489) #15	Hps6 (ENSPEMG00000003992) #16	Armh3 (ENSPEMG00000014466) #17	Kcnip2 (ENSPEMG00000015045) #18	Oga (ENSPEMG00000008883) #19	Npm3 (ENSPEMG00000007731) #20	Fgf8 (ENSPEMG00000012905) #21	Fbxw4 (ENSPEMG00000024901) #22	Dpcd (ENSPEMG00000014479) #23	Poll (ENSPEMG00000006876) #24	Btrc (ENSPEMG00000014260) #25	Lbx1 (ENSPEMG00000026119) #27	Tlx1 (ENSPEMG00000016966) #28	Kazald1 (ENSPEMG00000018686) #29	Sfxn3 (ENSPEMG00000012869) #30	ENSPEMG00000030678	Pdzd7 (ENSPEMG00000004000) #32	Lzts2 (ENSPEMG00000013419) #33	Twnk (ENSPEMG00000013921) #34	Mrpl43 (ENSPEMG00000001510) #35	Sema4g (ENSPEMG00000010019) #36	Slf2 (ENSPEMG00000018671) #37	Pax2 (ENSPEMG00000007884)
Prairie vole	MODERN SPECIES	16	Psd (ENSMOCG00000014904)	Nfkb2 (ENSMOCG00000011590)	Gbf1 (ENSMOCG00000022834)	Pitx3 (ENSMOCG00000012980)	Elovl3 (ENSMOCG00000022790)	Nolc1 (ENSMOCG00000015232) #13	ENSMOCG00000018283 #14	ENSMOCG00000014044 #14	ENSMOCG00000004202 #15	Hps6 (ENSMOCG00000001347) #16	Armh3 (ENSMOCG00000011932) #17	Kcnip2 (ENSMOCG00000022254) #18	Oga (ENSMOCG00000014392) #19	Npm3 (ENSMOCG00000013601) #20	Fgf8 (ENSMOCG00000021407) #21	Fbxw4 (ENSMOCG00000013178) #22	Dpcd (ENSMOCG00000013756) #23	Poll (ENSMOCG00000006566) #24	Btrc (ENSMOCG00000002451) #25	Lbx1 (ENSMOCG00000018337) #27	Tlx1 (ENSMOCG00000017096) #28	Kazald1 (ENSMOCG00000015994) #29	Sfxn3 (ENSMOCG00000022608) #30	ENSMOCG00000019069 #32	ENSMOCG00000014095 #32	Lzts2 (ENSMOCG00000012162) #33	Twnk (ENSMOCG00000004167) #34	Mrpl43 (ENSMOCG00000008602) #35	Sema4g (ENSMOCG00000004639) #36	ENSMOCG00000015291	Slf2 (ENSMOCG00000019122) #37
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Chinese hamster chok1gshd	MODERN SPECIES	215	Cuedc2 (ENSCGRG00001022970)	Psd (ENSCGRG00001000373)	Nfkb2 (ENSCGRG00001009030)	Gbf1 (ENSCGRG00001022494)	Pitx3 (ENSCGRG00001024147)	ELOVL3 (ENSCGRG00001005008)	Nolc1 (ENSCGRG00001009806) #13	Pprc1 (ENSCGRG00001011726) #14	Ldb1 (ENSCGRG00001020743) #15	Hps6 (ENSCGRG00001010957) #16	Armh3 (ENSCGRG00001015570) #17	Kcnip2 (ENSCGRG00001019478) #18	Oga (ENSCGRG00001020553) #19	Npm3 (ENSCGRG00001013345) #20	Fgf8 (ENSCGRG00001015246) #21	Fbxw4 (ENSCGRG00001003996) #22	Dpcd (ENSCGRG00001005917) #23	Poll (ENSCGRG00001010513) #24	Btrc (ENSCGRG00001015459) #25	Lbx1 (ENSCGRG00001017540) #27	Tlx1 (ENSCGRG00001021053) #28	Kazald1 (ENSCGRG00001000227) #29	Sfxn3 (ENSCGRG00001015591) #30	Pdzd7 (ENSCGRG00001017672) #32	Lzts2 (ENSCGRG00001023049) #33	Twnk (ENSCGRG00001000710) #34	Mrpl43 (ENSCGRG00001003475) #35	Sema4g (ENSCGRG00001007429) #36	Slf2 (ENSCGRG00001014230) #37	Pax2 (ENSCGRG00001019089)	Hif1an (ENSCGRG00001019981)
Golden Hamster	MODERN SPECIES	617	Psd (ENSMAUG00000017086)	Nfkb2 (ENSMAUG00000016292)	ENSMAUG00000017130	ENSMAUG00000017791	Pitx3 (ENSMAUG00000015434)	Elovl3 (ENSMAUG00000013792)	Pprc1 (ENSMAUG00000016674) #14	Ldb1 (ENSMAUG00000018515) #15	Hps6 (ENSMAUG00000002039) #16	Armh3 (ENSMAUG00000019449) #17	Kcnip2 (ENSMAUG00000019652) #18	Oga (ENSMAUG00000015052) #19	Npm3 (ENSMAUG00000015218) #20	Fgf8 (ENSMAUG00000016383) #21	ENSMAUG00000015569	ENSMAUG00000015787 #22	Dpcd (ENSMAUG00000017884) #23	Poll (ENSMAUG00000014674) #24	Btrc (ENSMAUG00000016001) #25	Lbx1 (ENSMAUG00000015198) #27	Tlx1 (ENSMAUG00000015538) #28	Kazald1 (ENSMAUG00000017475) #29	Sfxn3 (ENSMAUG00000017975) #30	ENSMAUG00000015875 #32	Lzts2 (ENSMAUG00000018041) #33	Twnk (ENSMAUG00000015403) #34	Mrpl43 (ENSMAUG00000015594) #35	Sema4g (ENSMAUG00000016054) #36	Slf2 (ENSMAUG00000017620) #37	Pax2 (ENSMAUG00000015931)	Hif1an (ENSMAUG00000019619)
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.a.a ##13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Rabbit	MODERN SPECIES	9	FBXL15 (ENSOCUG00000005764)	CUEDC2 (ENSOCUG00000023995)	PSD (ENSOCUG00000005751)	NFKB2 (ENSOCUG00000005735)	GBF1 (ENSOCUG00000005714)	PITX3 (ENSOCUG00000016065)	ELOVL3 (ENSOCUG00000016071)	ENSOCUG00000000516 ##13	PPRC1 (ENSOCUG00000000510) #14	LDB1 (ENSOCUG00000025582) #15	ARMH3 (ENSOCUG00000002776) #17	KCNIP2 (ENSOCUG00000026348) #18	OGA (ENSOCUG00000002768) #19	NPM3 (ENSOCUG00000016819) #20	ENSOCUG00000027864 #21	FBXW4 (ENSOCUG00000015386) #22	DPCD (ENSOCUG00000015373) #23	POLL (ENSOCUG00000015364) #24	BTRC (ENSOCUG00000015353) #25	LBX1 (ENSOCUG00000013145) #27	TLX1 (ENSOCUG00000013136) #28	KAZALD1 (ENSOCUG00000002974) #29	SFXN3 (ENSOCUG00000002751) #30	ENSOCUG00000031924 #32	ENSOCUG00000006651 #32	LZTS2 (ENSOCUG00000021502) #33	TWNK (ENSOCUG00000002746) #34	MRPL43 (ENSOCUG00000002742) #35	SEMA4G (ENSOCUG00000002737) #36	SLF2 (ENSOCUG00000002728) #37	PAX2 (ENSOCUG00000012860)
Pika	MODERN SPECIES	604																ENSOPRG00000007176 #22	DPCD (ENSOPRG00000007167) #23	POLL (ENSOPRG00000007162) #24	BTRC (ENSOPRG00000007146) #25	LBX1 (ENSOPRG00000007142) #27	TLX1 (ENSOPRG00000007137) #28	KAZALD1 (ENSOPRG00000007134) #29	ENSOPRG00000007119 #32	LZTS2 (ENSOPRG00000007108) #33	TWNK (ENSOPRG00000007100) #34	MRPL43 (ENSOPRG00000007093) #35	ENSOPRG00000007068 #36	SLF2 (ENSOPRG00000007048) #37
Primates	ANCESTRAL SPECIES	16	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.a.b ##13	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00940000166765	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Greater bamboo lemur	MODERN SPECIES	375																FBXW4 (ENSPSMG00000010859) #22	DPCD (ENSPSMG00000010850) #23	POLL (ENSPSMG00000010806) #24	BTRC (ENSPSMG00000009920) #25	LBX1 (ENSPSMG00000009389) #27	TLX1 (ENSPSMG00000009380) #28	KAZALD1 (ENSPSMG00000009371) #29	SFXN3 (ENSPSMG00000009356) #30	ENSPSMG00000009339	PDZD7 (ENSPSMG00000009272) #32	LZTS2 (ENSPSMG00000009191) #33	TWNK (ENSPSMG00000009185) #34	ENSPSMG00000009174 #35	SEMA4G (ENSPSMG00000009158) #36	SLF2 (ENSPSMG00000009144) #37	ENSPSMG00000009133
Coquerels sifaka	MODERN SPECIES	870	CUEDC2 (ENSPCOG00000028615)	FBXL15 (ENSPCOG00000025091)	PSD (ENSPCOG00000014657)	NFKB2 (ENSPCOG00000024535)	GBF1 (ENSPCOG00000027442)	PITX3 (ENSPCOG00000018343)	ELOVL3 (ENSPCOG00000022173)	ENSPCOG00000028588	PPRC1 (ENSPCOG00000025917) #14	LDB1 (ENSPCOG00000014358) #15	ARMH3 (ENSPCOG00000019882) #17	KCNIP2 (ENSPCOG00000024556) #18	OGA (ENSPCOG00000014940) #19	NPM3 (ENSPCOG00000014704) #20	FGF8 (ENSPCOG00000017981) #21	FBXW4 (ENSPCOG00000021206) #22	DPCD (ENSPCOG00000017781) #23	POLL (ENSPCOG00000019314) #24	ENSPCOG00000026908	ENSPCOG00000010924	BTRC (ENSPCOG00000020549) #25	LBX1 (ENSPCOG00000019643) #27	TLX1 (ENSPCOG00000000103) #28	KAZALD1 (ENSPCOG00000016724) #29	SFXN3 (ENSPCOG00000025511) #30	PDZD7 (ENSPCOG00000026114) #32	LZTS2 (ENSPCOG00000023474) #33	TWNK (ENSPCOG00000014623) #34	MRPL43 (ENSPCOG00000027271) #35	SEMA4G (ENSPCOG00000023281) #36	SLF2 (ENSPCOG00000025314) #37
Mouse lemur	MODERN SPECIES	6	CUEDC2 (ENSMICG00000043889)	FBXL15 (ENSMICG00000042452)	PSD (ENSMICG00000011877)	NFKB2 (ENSMICG00000011856)	GBF1 (ENSMICG00000011832)	PITX3 (ENSMICG00000045312)	ELOVL3 (ENSMICG00000048136)	NOLC1 (ENSMICG00000011811) #13	PPRC1 (ENSMICG00000011794) #14	LDB1 (ENSMICG00000011785) #15	ARMH3 (ENSMICG00000011767) #17	KCNIP2 (ENSMICG00000011754) #18	OGA (ENSMICG00000011745) #19	NPM3 (ENSMICG00000044119) #20	FGF8 (ENSMICG00000011733) #21	FBXW4 (ENSMICG00000030032) #22	DPCD (ENSMICG00000007381) #23	POLL (ENSMICG00000044578) #24	ENSMICG00000032738	BTRC (ENSMICG00000007365) #25	LBX1 (ENSMICG00000042752) #27	TLX1 (ENSMICG00000000020) #28	KAZALD1 (ENSMICG00000042680) #29	SFXN3 (ENSMICG00000000018) #30	PDZD7 (ENSMICG00000000017) #32	LZTS2 (ENSMICG00000000016) #33	TWNK (ENSMICG00000045106) #34	ENSMICG00000000014 #35	SEMA4G (ENSMICG00000030739) #36	SLF2 (ENSMICG00000001371) #37	PAX2 (ENSMICG00000001357)
Bushbaby	MODERN SPECIES	136	FBXL15 (ENSOGAG00000016397)	PSD (ENSOGAG00000016389)	NFKB2 (ENSOGAG00000016379)	GBF1 (ENSOGAG00000016366)	PITX3 (ENSOGAG00000029285)	ELOVL3 (ENSOGAG00000016363)	NOLC1 (ENSOGAG00000016359) #13	PPRC1 (ENSOGAG00000016354) #14	LDB1 (ENSOGAG00000016349) #15	HPS6 (ENSOGAG00000033543) #16	ARMH3 (ENSOGAG00000010009) #17	KCNIP2 (ENSOGAG00000010006) #18	ENSOGAG00000010002 #19	NPM3 (ENSOGAG00000010001) #20	FGF8 (ENSOGAG00000024920) #21	FBXW4 (ENSOGAG00000033125) #22	POLL (ENSOGAG00000012042) #24	BTRC (ENSOGAG00000014623) #25	LBX1 (ENSOGAG00000008679) #27	TLX1 (ENSOGAG00000013614) #28	KAZALD1 (ENSOGAG00000011722) #29	SFXN3 (ENSOGAG00000012881) #30	PDZD7 (ENSOGAG00000012875) #32	LZTS2 (ENSOGAG00000012873) #33	TWNK (ENSOGAG00000029204) #34	MRPL43 (ENSOGAG00000030715) #35	SEMA4G (ENSOGAG00000015286) #36	SLF2 (ENSOGAG00000015280) #37	PAX2 (ENSOGAG00000015274)	HIF1AN (ENSOGAG00000010425)	ENSOGAG00000030711
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.a.b ##13	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00910000147806	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00910000147806	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Orangutan	MODERN SPECIES	1	NFKB2 (ENSPPYG00000002599)	PSD (ENSPPYG00000002600)	GBF1 (ENSPPYG00000002598)	ENSPPYG00000002597	ELOVL3 (ENSPPYG00000002596)	NOLC1 (ENSPPYG00000002595) #13	PPRC1 (ENSPPYG00000002594) #14	LDB1 (ENSPPYG00000002593) #15	HPS6 (ENSPPYG00000030981) #16	ARMH3 (ENSPPYG00000002592) #17	KCNIP2 (ENSPPYG00000002591) #18	OGA (ENSPPYG00000002590) #19	NPM3 (ENSPPYG00000002589) #20	FGF8 (ENSPPYG00000002588) #21	ENSPPYG00000002587	FBXW4 (ENSPPYG00000002586) #22	DPCD (ENSPPYG00000002585) #23	POLL (ENSPPYG00000002584) #24	BTRC (ENSPPYG00000002583) #25	LBX1 (ENSPPYG00000002582) #27	TLX1 (ENSPPYG00000002581) #28	KAZALD1 (ENSPPYG00000002580) #29	SFXN3 (ENSPPYG00000002579) #30	PDZD7 (ENSPPYG00000002578) #32	LZTS2 (ENSPPYG00000002577) #33	TWNK (ENSPPYG00000002576) #34	ENSPPYG00000002575 #35	SEMA4G (ENSPPYG00000002574) #36	SLF2 (ENSPPYG00000002573) #37	ENSPPYG00000002572	HIF1AN (ENSPPYG00000002571)
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029.c #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00910000147806	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029.c #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Pan	ANCESTRAL SPECIES	16	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029.c #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Chimpanzee	MODERN SPECIES	1	FBXL15 (ENSPTRG00000002890)	PSD (ENSPTRG00000002889)	NFKB2 (ENSPTRG00000002888)	GBF1 (ENSPTRG00000002887)	PITX3 (ENSPTRG00000002886)	ELOVL3 (ENSPTRG00000002885)	NOLC1 (ENSPTRG00000023882) #13	PPRC1 (ENSPTRG00000002883) #14	LDB1 (ENSPTRG00000023411) #15	HPS6 (ENSPTRG00000002881) #16	ARMH3 (ENSPTRG00000002879) #17	KCNIP2 (ENSPTRG00000002878) #18	OGA (ENSPTRG00000002876) #19	NPM3 (ENSPTRG00000002875) #20	FGF8 (ENSPTRG00000002874) #21	FBXW4 (ENSPTRG00000048959) #22	DPCD (ENSPTRG00000002871) #23	POLL (ENSPTRG00000002870) #24	BTRC (ENSPTRG00000002869) #25	LBX1 (ENSPTRG00000002868) #27	TLX1 (ENSPTRG00000002867) #28	KAZALD1 (ENSPTRG00000002865) #29	SFXN3 (ENSPTRG00000002864) #30	PDZD7 (ENSPTRG00000002862) #32	LZTS2 (ENSPTRG00000042870) #33	TWNK (ENSPTRG00000029751) #34	MRPL43 (ENSPTRG00000002858) #35	SEMA4G (ENSPTRG00000052672) #36	SLF2 (ENSPTRG00000002855) #37	PAX2 (ENSPTRG00000002853)	HIF1AN (ENSPTRG00000002852)
Bonobo	MODERN SPECIES	1	PSD (ENSPPAG00000040288)	NFKB2 (ENSPPAG00000030613)	GBF1 (ENSPPAG00000042922)	ENSPPAG00000008353	ELOVL3 (ENSPPAG00000040688)	ENSPPAG00000043390	NOLC1 (ENSPPAG00000038082) #13	PPRC1 (ENSPPAG00000032544) #14	LDB1 (ENSPPAG00000024094) #15	HPS6 (ENSPPAG00000011993) #16	ARMH3 (ENSPPAG00000040734) #17	KCNIP2 (ENSPPAG00000029455) #18	OGA (ENSPPAG00000030424) #19	NPM3 (ENSPPAG00000040517) #20	FGF8 (ENSPPAG00000039985) #21	ENSPPAG00000025691 #22	DPCD (ENSPPAG00000038194) #23	POLL (ENSPPAG00000036999) #24	BTRC (ENSPPAG00000034237) #25	TLX1 (ENSPPAG00000040366) #28	KAZALD1 (ENSPPAG00000029890) #29	SFXN3 (ENSPPAG00000029879) #30	PDZD7 (ENSPPAG00000036974) #32	LZTS2 (ENSPPAG00000003235) #33	TWNK (ENSPPAG00000035055) #34	ENSPPAG00000042828 #35	SEMA4G (ENSPPAG00000039460) #36	SLF2 (ENSPPAG00000040627) #37	ENSPPAG00000004195	HIF1AN (ENSPPAG00000035861)	NDUFB8 (ENSPPAG00000025513)
Human	MODERN SPECIES	1	FBXL15 (ENSG00000107872)	PSD (ENSG00000059915)	NFKB2 (ENSG00000077150)	GBF1 (ENSG00000107862)	PITX3 (ENSG00000107859)	ELOVL3 (ENSG00000119915)	NOLC1 (ENSG00000166197) #13	PPRC1 (ENSG00000148840) #14	LDB1 (ENSG00000198728) #15	HPS6 (ENSG00000166189) #16	ARMH3 (ENSG00000120029) #17	KCNIP2 (ENSG00000120049) #18	OGA (ENSG00000198408) #19	NPM3 (ENSG00000107833) #20	FGF8 (ENSG00000107831) #21	FBXW4 (ENSG00000107829) #22	POLL (ENSG00000166169) #24	DPCD (ENSG00000166171) #23	BTRC (ENSG00000166167) #25	LBX1 (ENSG00000138136) #27	TLX1 (ENSG00000107807) #28	KAZALD1 (ENSG00000107821) #29	SFXN3 (ENSG00000107819) #30	PDZD7 (ENSG00000186862) #32	LZTS2 (ENSG00000107816) #33	TWNK (ENSG00000107815) #34	SEMA4G (ENSG00000095539) #36	MRPL43 (ENSG00000055950) #35	SLF2 (ENSG00000119906) #37	PAX2 (ENSG00000075891)	HIF1AN (ENSG00000166135)
Gorilla	MODERN SPECIES	1	FBXL15 (ENSGGOG00000006993)	PSD (ENSGGOG00000006985)	NFKB2 (ENSGGOG00000006971)	GBF1 (ENSGGOG00000006948)	PITX3 (ENSGGOG00000026128)	ELOVL3 (ENSGGOG00000024219)	NOLC1 (ENSGGOG00000002158) #13	PPRC1 (ENSGGOG00000002155) #14	LDB1 (ENSGGOG00000002151) #15	HPS6 (ENSGGOG00000008892) #16	ARMH3 (ENSGGOG00000006539) #17	KCNIP2 (ENSGGOG00000006534) #18	OGA (ENSGGOG00000002901) #19	NPM3 (ENSGGOG00000027500) #20	FGF8 (ENSGGOG00000015108) #21	ENSGGOG00000005039 #22	DPCD (ENSGGOG00000005035) #23	POLL (ENSGGOG00000005029) #24	ENSGGOG00000038754	BTRC (ENSGGOG00000005023) #25	LBX1 (ENSGGOG00000012521) #27	TLX1 (ENSGGOG00000005880) #28	KAZALD1 (ENSGGOG00000004516) #29	SFXN3 (ENSGGOG00000015442) #30	PDZD7 (ENSGGOG00000015436) #32	LZTS2 (ENSGGOG00000015430) #33	TWNK (ENSGGOG00000015421) #34	ENSGGOG00000023716 #35	SEMA4G (ENSGGOG00000025153) #36	SLF2 (ENSGGOG00000002070) #37	ENSGGOG00000014908
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000005029.d #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000005029.d #22
Pan	ANCESTRAL SPECIES																	ENSGT00390000005029.d #22
Chimpanzee	MODERN SPECIES	13	ENSPTRG00000046633	ENSPTRG00000044044	IGLV2-8 (ENSPTRG00000044777)	ENSPTRG00000052793	ENSPTRG00000049497	ENSPTRG00000042669	IGLC3 (ENSPTRG00000052527)	ENSPTRG00000050283	ENSPTRG00000042833	IGLC7 (ENSPTRG00000042977)	RSPH14 (ENSPTRG00000014134)	GNAZ (ENSPTRG00000014135)	RAB36 (ENSPTRG00000014136)	ENSPTRG00000049549	BCR (ENSPTRG00000014138)	ENSPTRG00000045141 #22	ENSPTRG00000044750	ENSPTRG00000014143	ENSPTRG00000043139	DRICH1 (ENSPTRG00000014145)	ENSPTRG00000046832	ENSPTRG00000014169	RGL4 (ENSPTRG00000014147)	ENSPTRG00000051783	ENSPTRG00000050549	ENSPTRG00000049144	ENSPTRG00000043596	ENSPTRG00000014131	ZNF280A (ENSPTRG00000045083)	PRAME (ENSPTRG00000014123)	ENSPTRG00000043689
Gibbon	MODERN SPECIES	18	ENSNLEG00000015114	NFKB2 (ENSNLEG00000015079)	GBF1 (ENSNLEG00000015044)	PITX3 (ENSNLEG00000015040)	ELOVL3 (ENSNLEG00000015039)	NOLC1 (ENSNLEG00000015012) #13	PPRC1 (ENSNLEG00000014996) #14	LDB1 (ENSNLEG00000014982) #15	HPS6 (ENSNLEG00000019112) #16	ARMH3 (ENSNLEG00000014964) #17	ENSNLEG00000030076	ENSNLEG00000014924 #18	OGA (ENSNLEG00000014902) #19	ENSNLEG00000029281 #20	FGF8 (ENSNLEG00000014890) #21	ENSNLEG00000014885 #22	DPCD (ENSNLEG00000014878) #23	POLL (ENSNLEG00000014861) #24	BTRC (ENSNLEG00000014843) #25	ENSNLEG00000028284	LBX1 (ENSNLEG00000014840) #27	TLX1 (ENSNLEG00000029481) #28	KAZALD1 (ENSNLEG00000035599) #29	SFXN3 (ENSNLEG00000014831) #30	PDZD7 (ENSNLEG00000014823) #32	LZTS2 (ENSNLEG00000014822) #33	TWNK (ENSNLEG00000014818) #34	ENSNLEG00000014812 #35	SEMA4G (ENSNLEG00000014804) #36	SLF2 (ENSNLEG00000014791) #37	ENSNLEG00000014786
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.m #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT01100000263577.a.a.b.b.a.a.b.a.a.a.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.m #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000153294.m.a.c.b.p.d
Rhesus	MODERN SPECIES	19	MFSD13A (ENSMMUG00000011948)	ENSMMUG00000003000	GBF1 (ENSMMUG00000002985)	PITX3 (ENSMMUG00000056167)	ELOVL3 (ENSMMUG00000022752)	NOLC1 (ENSMMUG00000001183) #13	PPRC1 (ENSMMUG00000001186) #14	LDB1 (ENSMMUG00000009375) #15	ENSMMUG00000056725	HPS6 (ENSMMUG00000009374) #16	ARMH3 (ENSMMUG00000001539) #17	KCNIP2 (ENSMMUG00000015776) #18	OGA (ENSMMUG00000015775) #19	NPM3 (ENSMMUG00000015774) #20	FGF8 (ENSMMUG00000015771) #21	FBXW4 (ENSMMUG00000052198) #22	DPCD (ENSMMUG00000006751) #23	POLL (ENSMMUG00000006747) #24	BTRC (ENSMMUG00000006741) #25	LBX1 (ENSMMUG00000060144) #27	TLX1 (ENSMMUG00000017667) #28	KAZALD1 (ENSMMUG00000017668) #29	SFXN3 (ENSMMUG00000022620) #30	LZTS2 (ENSMMUG00000010674) #33	TWNK (ENSMMUG00000064033) #34	MRPL43 (ENSMMUG00000010679) #35	SEMA4G (ENSMMUG00000010680) #36	SLF2 (ENSMMUG00000013418) #37	PAX2 (ENSMMUG00000009163)	ENSMMUG00000040838	ENSMMUG00000030563
Crab-eating macaque	MODERN SPECIES	19	NFKB2 (ENSMFAG00000031139)	ENSMFAG00000047401	GBF1 (ENSMFAG00000002812)	PITX3 (ENSMFAG00000045143)	ELOVL3 (ENSMFAG00000036362)	NOLC1 (ENSMFAG00000044654) #13	ENSMFAG00000038589 #14	LDB1 (ENSMFAG00000041257) #15	ENSMFAG00000061163	ENSMFAG00000051632	ARMH3 (ENSMFAG00000044833) #17	KCNIP2 (ENSMFAG00000046056) #18	OGA (ENSMFAG00000032188) #19	NPM3 (ENSMFAG00000041878) #20	FGF8 (ENSMFAG00000003751) #21	FBXW4 (ENSMFAG00000044810) #22	DPCD (ENSMFAG00000036058) #23	POLL (ENSMFAG00000043080) #24	BTRC (ENSMFAG00000005295) #25	TLX1 (ENSMFAG00000045878) #28	KAZALD1 (ENSMFAG00000063924) #29	SFXN3 (ENSMFAG00000035501) #30	PDZD7 (ENSMFAG00000037794) #32	LZTS2 (ENSMFAG00000048904) #33	TWNK (ENSMFAG00000032824) #34	MRPL43 (ENSMFAG00000036954) #35	SEMA4G (ENSMFAG00000038405) #36	SLF2 (ENSMFAG00000042449) #37	PAX2 (ENSMFAG00000041514)	ENSMFAG00000004864	HIF1AN (ENSMFAG00000043376)
Pig-tailed macaque	MODERN SPECIES	550	FBXL15 (ENSMNEG00000037370)	PSD (ENSMNEG00000037103)	NFKB2 (ENSMNEG00000030201)	GBF1 (ENSMNEG00000030880)	PITX3 (ENSMNEG00000027087)	ELOVL3 (ENSMNEG00000026432)	NOLC1 (ENSMNEG00000033199) #13	PPRC1 (ENSMNEG00000031603) #14	LDB1 (ENSMNEG00000039832) #15	HPS6 (ENSMNEG00000003739) #16	ARMH3 (ENSMNEG00000027491) #17	KCNIP2 (ENSMNEG00000033420) #18	OGA (ENSMNEG00000042719) #19	NPM3 (ENSMNEG00000039999) #20	FGF8 (ENSMNEG00000044546) #21	FBXW4 (ENSMNEG00000007347) #22	DPCD (ENSMNEG00000039583) #23	ENSMNEG00000041174	POLL (ENSMNEG00000032214) #24	BTRC (ENSMNEG00000043926) #25	LBX1 (ENSMNEG00000003768) #27	TLX1 (ENSMNEG00000039702) #28	KAZALD1 (ENSMNEG00000041154) #29	SFXN3 (ENSMNEG00000041774) #30	PDZD7 (ENSMNEG00000036573) #32	ENSMNEG00000000753	LZTS2 (ENSMNEG00000022148) #33	TWNK (ENSMNEG00000041560) #34	MRPL43 (ENSMNEG00000038269) #35	SEMA4G (ENSMNEG00000029411) #36	SLF2 (ENSMNEG00000042692) #37
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Olive baboon	MODERN SPECIES	2	FBXL15 (ENSPANG00000021009)	PSD (ENSPANG00000021011)	NFKB2 (ENSPANG00000021013)	GBF1 (ENSPANG00000021018)	PITX3 (ENSPANG00000021020)	ELOVL3 (ENSPANG00000021015)	NOLC1 (ENSPANG00000021014) #13	PPRC1 (ENSPANG00000021042) #14	LDB1 (ENSPANG00000021043) #15	HPS6 (ENSPANG00000004207) #16	ARMH3 (ENSPANG00000021051) #17	KCNIP2 (ENSPANG00000021049) #18	OGA (ENSPANG00000021048) #19	NPM3 (ENSPANG00000021046) #20	FGF8 (ENSPANG00000021045) #21	FBXW4 (ENSPANG00000021059) #22	DPCD (ENSPANG00000021068) #23	POLL (ENSPANG00000021067) #24	BTRC (ENSPANG00000021065) #25	ENSPANG00000045293	LBX1 (ENSPANG00000021064) #27	ENSPANG00000040129	TLX1 (ENSPANG00000021063) #28	KAZALD1 (ENSPANG00000021061) #29	SFXN3 (ENSPANG00000021121) #30	PDZD7 (ENSPANG00000021127) #32	LZTS2 (ENSPANG00000021126) #33	TWNK (ENSPANG00000021123) #34	MRPL43 (ENSPANG00000021122) #35	SEMA4G (ENSPANG00000021137) #36	SLF2 (ENSPANG00000021133) #37
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Sooty mangabey	MODERN SPECIES	598	FBXL15 (ENSCATG00000038266)	PSD (ENSCATG00000029120)	NFKB2 (ENSCATG00000033674)	GBF1 (ENSCATG00000041222)	PITX3 (ENSCATG00000035980)	ELOVL3 (ENSCATG00000029918)	NOLC1 (ENSCATG00000020949) #13	PPRC1 (ENSCATG00000029634) #14	LDB1 (ENSCATG00000041139) #15	HPS6 (ENSCATG00000007175) #16	ARMH3 (ENSCATG00000044859) #17	KCNIP2 (ENSCATG00000037631) #18	OGA (ENSCATG00000032677) #19	NPM3 (ENSCATG00000013755) #20	FGF8 (ENSCATG00000032104) #21	FBXW4 (ENSCATG00000042023) #22	DPCD (ENSCATG00000015600) #23	POLL (ENSCATG00000030579) #24	BTRC (ENSCATG00000041687) #25	LBX1 (ENSCATG00000015241) #27	TLX1 (ENSCATG00000027146) #28	KAZALD1 (ENSCATG00000012292) #29	SFXN3 (ENSCATG00000031461) #30	ENSCATG00000013628	PDZD7 (ENSCATG00000041708) #32	LZTS2 (ENSCATG00000035009) #33	TWNK (ENSCATG00000031735) #34	MRPL43 (ENSCATG00000045001) #35	SEMA4G (ENSCATG00000040594) #36	SLF2 (ENSCATG00000009305) #37	PAX2 (ENSCATG00000040463)
Drill	MODERN SPECIES	660	CUEDC2 (ENSMLEG00000033705)	FBXL15 (ENSMLEG00000031428)	PSD (ENSMLEG00000007902)	NFKB2 (ENSMLEG00000025549)	GBF1 (ENSMLEG00000030526)	ENSMLEG00000041298	ELOVL3 (ENSMLEG00000042786)	NOLC1 (ENSMLEG00000040773) #13	PPRC1 (ENSMLEG00000035092) #14	LDB1 (ENSMLEG00000029239) #15	ARMH3 (ENSMLEG00000040244) #17	KCNIP2 (ENSMLEG00000040604) #18	OGA (ENSMLEG00000034257) #19	NPM3 (ENSMLEG00000038129) #20	FGF8 (ENSMLEG00000038840) #21	FBXW4 (ENSMLEG00000039840) #22	DPCD (ENSMLEG00000036892) #23	POLL (ENSMLEG00000044464) #24	BTRC (ENSMLEG00000037020) #25	LBX1 (ENSMLEG00000038173) #27	TLX1 (ENSMLEG00000036491) #28	KAZALD1 (ENSMLEG00000041241) #29	SFXN3 (ENSMLEG00000041643) #30	ENSMLEG00000018361	PDZD7 (ENSMLEG00000044282) #32	LZTS2 (ENSMLEG00000043006) #33	TWNK (ENSMLEG00000028857) #34	PDIA2 (ENSMLEG00000027539)	MRPL43 (ENSMLEG00000031351) #35	SEMA4G (ENSMLEG00000032692) #36	SLF2 (ENSMLEG00000043602) #37
Vervet Monkey	MODERN SPECIES	28	CUEDC2 (ENSCSAG00000005434)	PSD (ENSCSAG00000005438)	NFKB2 (ENSCSAG00000005442)	GBF1 (ENSCSAG00000005450)	PITX3 (ENSCSAG00000005456)	ELOVL3 (ENSCSAG00000005460)	NOLC1 (ENSCSAG00000005465) #13	PPRC1 (ENSCSAG00000005471) #14	LDB1 (ENSCSAG00000005474) #15	HPS6 (ENSCSAG00000018450) #16	ARMH3 (ENSCSAG00000005491) #17	KCNIP2 (ENSCSAG00000005501) #18	OGA (ENSCSAG00000005507) #19	NPM3 (ENSCSAG00000005509) #20	FGF8 (ENSCSAG00000005512) #21	FBXW4 (ENSCSAG00000005515) #22	DPCD (ENSCSAG00000005519) #23	POLL (ENSCSAG00000005523) #24	BTRC (ENSCSAG00000005528) #25	LBX1 (ENSCSAG00000005532) #27	TLX1 (ENSCSAG00000005535) #28	KAZALD1 (ENSCSAG00000005540) #29	SFXN3 (ENSCSAG00000005542) #30	ENSCSAG00000005544 #32	LZTS2 (ENSCSAG00000005545) #33	TWNK (ENSCSAG00000005548) #34	MRPL43 (ENSCSAG00000005558) #35	SEMA4G (ENSCSAG00000005560) #36	SLF2 (ENSCSAG00000005566) #37	PAX2 (ENSCSAG00000005568)	HIF1AN (ENSCSAG00000005570)
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Black snub-nosed monkey	MODERN SPECIES	1538	FBXL15 (ENSRBIG00000042023)	PSD (ENSRBIG00000042590)	NFKB2 (ENSRBIG00000028068)	GBF1 (ENSRBIG00000005903)	PITX3 (ENSRBIG00000035684)	ELOVL3 (ENSRBIG00000025844)	NOLC1 (ENSRBIG00000032216) #13	PPRC1 (ENSRBIG00000027711) #14	LDB1 (ENSRBIG00000023954) #15	HPS6 (ENSRBIG00000021408) #16	ARMH3 (ENSRBIG00000030224) #17	KCNIP2 (ENSRBIG00000036933) #18	OGA (ENSRBIG00000042557) #19	NPM3 (ENSRBIG00000039086) #20	FGF8 (ENSRBIG00000038141) #21	FBXW4 (ENSRBIG00000029703) #22	DPCD (ENSRBIG00000029630) #23	ENSRBIG00000025168	POLL (ENSRBIG00000034819) #24	BTRC (ENSRBIG00000000373) #25	LBX1 (ENSRBIG00000043576) #27	TLX1 (ENSRBIG00000028309) #28	KAZALD1 (ENSRBIG00000029657) #29	SFXN3 (ENSRBIG00000033345) #30	PDZD7 (ENSRBIG00000030466) #32	ENSRBIG00000006061	LZTS2 (ENSRBIG00000030156) #33	TWNK (ENSRBIG00000042725) #34	MRPL43 (ENSRBIG00000029374) #35	SEMA4G (ENSRBIG00000025014) #36	SLF2 (ENSRBIG00000027825) #37
Golden snub-nosed monkey	MODERN SPECIES	3053	FBXL15 (ENSRROG00000033504)	PSD (ENSRROG00000041323)	NFKB2 (ENSRROG00000034177)	GBF1 (ENSRROG00000033162)	PITX3 (ENSRROG00000020365)	ELOVL3 (ENSRROG00000040217)	NOLC1 (ENSRROG00000038056) #13	PPRC1 (ENSRROG00000044599) #14	LDB1 (ENSRROG00000033778) #15	HPS6 (ENSRROG00000015252) #16	ARMH3 (ENSRROG00000032495) #17	KCNIP2 (ENSRROG00000029744) #18	OGA (ENSRROG00000045455) #19	NPM3 (ENSRROG00000029912) #20	FGF8 (ENSRROG00000038994) #21	FBXW4 (ENSRROG00000038393) #22	ENSRROG00000023920	DPCD (ENSRROG00000044275) #23	POLL (ENSRROG00000032669) #24	BTRC (ENSRROG00000030265) #25	LBX1 (ENSRROG00000044455) #27	TLX1 (ENSRROG00000044869) #28	KAZALD1 (ENSRROG00000028521) #29	SFXN3 (ENSRROG00000042473) #30	PDZD7 (ENSRROG00000042033) #32	LZTS2 (ENSRROG00000044508) #33	TWNK (ENSRROG00000034001) #34	MRPL43 (ENSRROG00000036241) #35	SEMA4G (ENSRROG00000029089) #36	SLF2 (ENSRROG00000032382) #37	PAX2 (ENSRROG00000036335)
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796.g.b #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796.g.b #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Marmoset	MODERN SPECIES	3	NFKB2 (ENSCJAG00000017928)	GBF1 (ENSCJAG00000017861)	PITX3 (ENSCJAG00000017858)	ELOVL3 (ENSCJAG00000079228)	ENSCJAG00000082055	NOLC1 (ENSCJAG00000017832) #13	PPRC1 (ENSCJAG00000017812) #14	LDB1 (ENSCJAG00000017777) #15	HPS6 (ENSCJAG00000022973) #16	ENSCJAG00000056816	ARMH3 (ENSCJAG00000017743) #17	KCNIP2 (ENSCJAG00000017676) #18	OGA (ENSCJAG00000017657) #19	NPM3 (ENSCJAG00000017650) #20	FGF8 (ENSCJAG00000084172) #21	FBXW4 (ENSCJAG00000017627) #22	DPCD (ENSCJAG00000017614) #23	POLL (ENSCJAG00000017600) #24	BTRC (ENSCJAG00000017573) #25	LBX1 (ENSCJAG00000017569) #27	ENSCJAG00000087194	TLX1 (ENSCJAG00000017563) #28	KAZALD1 (ENSCJAG00000017554) #29	SFXN3 (ENSCJAG00000017527) #30	PDZD7 (ENSCJAG00000017518) #32	LZTS2 (ENSCJAG00000041968) #33	ENSCJAG00000078679 #34	ENSCJAG00000017487 #34	ENSCJAG00000062174 #35	ENSCJAG00000017480 #35	SEMA4G (ENSCJAG00000070347) #36
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000002554 #17	ENSGT00390000005532.e.b.e	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796.g.b #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Capuchin	MODERN SPECIES	71	PSD (ENSCCAG00000018781)	NFKB2 (ENSCCAG00000036762)	GBF1 (ENSCCAG00000035570)	PITX3 (ENSCCAG00000024206)	ELOVL3 (ENSCCAG00000030858)	NOLC1 (ENSCCAG00000031293) #13	PPRC1 (ENSCCAG00000014910) #14	LDB1 (ENSCCAG00000032351) #15	ENSCCAG00000019492	ARMH3 (ENSCCAG00000030229) #17	ENSCCAG00000021166	KCNIP2 (ENSCCAG00000020733) #18	OGA (ENSCCAG00000035955) #19	ENSCCAG00000031043 #20	FGF8 (ENSCCAG00000028398) #21	FBXW4 (ENSCCAG00000015377) #22	DPCD (ENSCCAG00000031078) #23	POLL (ENSCCAG00000021549) #24	BTRC (ENSCCAG00000028586) #25	TYROBP (ENSCCAG00000030200)	LBX1 (ENSCCAG00000027225) #27	ENSCCAG00000018927	TLX1 (ENSCCAG00000022529) #28	KAZALD1 (ENSCCAG00000025698) #29	SFXN3 (ENSCCAG00000027543) #30	PDZD7 (ENSCCAG00000027027) #32	ENSCCAG00000031185	LZTS2 (ENSCCAG00000028122) #33	TWNK (ENSCCAG00000022331) #34	MRPL43 (ENSCCAG00000027213) #35	SEMA4G (ENSCCAG00000036740) #36
Bolivian squirrel monkey	MODERN SPECIES	47	PSD (ENSSBOG00000025518)	NFKB2 (ENSSBOG00000027266)	GBF1 (ENSSBOG00000021062)	ENSSBOG00000016252	ELOVL3 (ENSSBOG00000028586)	NOLC1 (ENSSBOG00000031205) #13	PPRC1 (ENSSBOG00000021902) #14	LDB1 (ENSSBOG00000029453) #15	ARMH3 (ENSSBOG00000027965) #17	ENSSBOG00000028614	KCNIP2 (ENSSBOG00000029268) #18	OGA (ENSSBOG00000024431) #19	NPM3 (ENSSBOG00000027661) #20	FGF8 (ENSSBOG00000026891) #21	ENSSBOG00000026520	FBXW4 (ENSSBOG00000036214) #22	DPCD (ENSSBOG00000024659) #23	POLL (ENSSBOG00000035823) #24	BTRC (ENSSBOG00000034480) #25	LBX1 (ENSSBOG00000026504) #27	ENSSBOG00000030742 #28	KAZALD1 (ENSSBOG00000032715) #29	SFXN3 (ENSSBOG00000032559) #30	PDZD7 (ENSSBOG00000035647) #32	LZTS2 (ENSSBOG00000032084) #33	TWNK (ENSSBOG00000020346) #34	MRPL43 (ENSSBOG00000022294) #35	SEMA4G (ENSSBOG00000026805) #36	SLF2 (ENSSBOG00000034063) #37	ENSSBOG00000036188	PAX2 (ENSSBOG00000030216)
Mas night monkey	MODERN SPECIES	658	CUEDC2 (ENSANAG00000038457)	FBXL15 (ENSANAG00000005171)	PSD (ENSANAG00000020954)	NFKB2 (ENSANAG00000038091)	GBF1 (ENSANAG00000028077)	PITX3 (ENSANAG00000023017)	ELOVL3 (ENSANAG00000037453)	PPRC1 (ENSANAG00000029448) #14	LDB1 (ENSANAG00000034893) #15	ENSANAG00000019621	ARMH3 (ENSANAG00000029091) #17	KCNIP2 (ENSANAG00000020362) #18	OGA (ENSANAG00000034639) #19	ENSANAG00000027082 #20	FGF8 (ENSANAG00000031951) #21	FBXW4 (ENSANAG00000034872) #22	DPCD (ENSANAG00000036663) #23	POLL (ENSANAG00000021199) #24	BTRC (ENSANAG00000035347) #25	LBX1 (ENSANAG00000036814) #27	TLX1 (ENSANAG00000027104) #28	KAZALD1 (ENSANAG00000020414) #29	SFXN3 (ENSANAG00000035635) #30	ENSANAG00000021408	PDZD7 (ENSANAG00000023929) #32	LZTS2 (ENSANAG00000012310) #33	TWNK (ENSANAG00000022264) #34	MRPL43 (ENSANAG00000034938) #35	SEMA4G (ENSANAG00000030905) #36	SLF2 (ENSANAG00000031592) #37	PAX2 (ENSANAG00000008318)
Tarsier	MODERN SPECIES	2654																FBXW4 (ENSTSYG00000036743) #22	DPCD (ENSTSYG00000036432) #23	POLL (ENSTSYG00000030944) #24
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Eulipotyphla	ANCESTRAL SPECIES	1283																ENSGT00390000005029 #22	ENSGT00390000014031 #23
Hedgehog	MODERN SPECIES	6057																FBXW4 (ENSEEUG00000004205) #22	DPCD (ENSEEUG00000004150) #23
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Carnivora	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Caniformia	ANCESTRAL SPECIES	13	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Dingo	MODERN SPECIES	165	FBXL15 (ENSCAFG00020010220)	PSD (ENSCAFG00020010215)	NFKB2 (ENSCAFG00020010204)	ENSCAFG00020010159	ENSCAFG00020010157	PITX3 (ENSCAFG00020010150)	ELOVL3 (ENSCAFG00020010148)	NOLC1 (ENSCAFG00020010146) #13	PPRC1 (ENSCAFG00020010030) #14	LDB1 (ENSCAFG00020010016) #15	ARMH3 (ENSCAFG00020009246) #17	KCNIP2 (ENSCAFG00020009192) #18	OGA (ENSCAFG00020009186) #19	NPM3 (ENSCAFG00020009185) #20	FGF8 (ENSCAFG00020009181) #21	FBXW4 (ENSCAFG00020009166) #22	DPCD (ENSCAFG00020009157) #23	POLL (ENSCAFG00020009154) #24	BTRC (ENSCAFG00020009146) #25	LBX1 (ENSCAFG00020009135) #27	TLX1 (ENSCAFG00020009130) #28	KAZALD1 (ENSCAFG00020009128) #29	SFXN3 (ENSCAFG00020009123) #30	ENSCAFG00020009067 #32	ENSCAFG00020009061 #32	LZTS2 (ENSCAFG00020009057) #33	TWNK (ENSCAFG00020009050) #34	MRPL43 (ENSCAFG00020009048) #35	SEMA4G (ENSCAFG00020009043) #36	SLF2 (ENSCAFG00020008672) #37	ENSCAFG00020008648
Dog	MODERN SPECIES	20	FBXL15 (ENSCAFG00845024340)	PSD (ENSCAFG00845023806)	NFKB2 (ENSCAFG00845023626)	GBF1 (ENSCAFG00845023390)	PITX3 (ENSCAFG00845023314)	ELOVL3 (ENSCAFG00845023260)	NOLC1 (ENSCAFG00845023156) #13	PPRC1 (ENSCAFG00845022994) #14	LDB1 (ENSCAFG00845022765) #15	HPS6 (ENSCAFG00845022716) #16	ARMH3 (ENSCAFG00845022019) #17	KCNIP2 (ENSCAFG00845021527) #18	OGA (ENSCAFG00845021307) #19	OGA (ENSCAFG00845021211) #20	FGF8 (ENSCAFG00845021086) #21	FBXW4 (ENSCAFG00845020929) #22	DPCD (ENSCAFG00845020872) #23	POLL (ENSCAFG00845020759) #24	BTRC (ENSCAFG00845020497) #25	LBX1 (ENSCAFG00845020416) #27	TLX1 (ENSCAFG00845020381) #28	KAZALD1 (ENSCAFG00845020241) #29	SFXN3 (ENSCAFG00845020173) #30	PDZD7 (ENSCAFG00845019707) #32	LZTS2 (ENSCAFG00845019571) #33	TWNK (ENSCAFG00845019518) #34	MRPL43 (ENSCAFG00845019486) #35	SEMA4G (ENSCAFG00845019254) #36	SLF2 (ENSCAFG00845018854) #37	PAX2 (ENSCAFG00845018449)	HIF1AN (ENSCAFG00845018163)
Red fox	MODERN SPECIES		FBXL15 (ENSVVUG00000003576)	PSD (ENSVVUG00000003561)	NFKB2 (ENSVVUG00000002942)	GBF1 (ENSVVUG00000002840)	PITX3 (ENSVVUG00000002824)	ELOVL3 (ENSVVUG00000002813)	NOLC1 (ENSVVUG00000002661) #13	LDB1 (ENSVVUG00000002609) #15	PPRC1 (ENSVVUG00000002566) #14	ENSVVUG00000002549	ARMH3 (ENSVVUG00000002381) #17	KCNIP2 (ENSVVUG00000001064) #18	OGA (ENSVVUG00000000965) #19	NPM3 (ENSVVUG00000000945) #20	FGF8 (ENSVVUG00000000784) #21	FBXW4 (ENSVVUG00000000770) #22	DPCD (ENSVVUG00000000749) #23	POLL (ENSVVUG00000000738) #24	BTRC (ENSVVUG00000000703) #25	LBX1 (ENSVVUG00000000689) #27	TLX1 (ENSVVUG00000000649) #28	KAZALD1 (ENSVVUG00000000631) #29	SFXN3 (ENSVVUG00000000615) #30	PDZD7 (ENSVVUG00000000597) #32	LZTS2 (ENSVVUG00000000572) #33	TWNK (ENSVVUG00000000429) #34	MRPL43 (ENSVVUG00000000360) #35	SEMA4G (ENSVVUG00000000341) #36	SLF2 (ENSVVUG00000000268) #37	ENSVVUG00000000159	ENSVVUG00000024932
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
American mink	MODERN SPECIES	25	PSD (ENSNVIG00000017477)	NFKB2 (ENSNVIG00000017504)	GBF1 (ENSNVIG00000017606)	PITX3 (ENSNVIG00000017782)	ELOV3 (ENSNVIG00000017791)	NOLC1 (ENSNVIG00000017826) #13	PPRC1 (ENSNVIG00000017896) #14	LDB1 (ENSNVIG00000017913) #15	HPS6 (ENSNVIG00000017937) #16	CJ076 (ENSNVIG00000017939) #17	ENSNVIG00000018006	KCIP2 (ENSNVIG00000018034) #18	OGA (ENSNVIG00000018264) #19	NPM3 (ENSNVIG00000018364) #20	FGF8 (ENSNVIG00000018394) #21	FBXW4 (ENSNVIG00000018442) #22	DPCD (ENSNVIG00000018457) #23	POLL (ENSNVIG00000018469) #24	ENSNVIG00000018498 #25	LBX1 (ENSNVIG00000018557) #27	ENSNVIG00000018563	TLX1 (ENSNVIG00000018572) #28	KAZALD1 (ENSNVIG00000018579) #29	SFXN3 (ENSNVIG00000018587) #30	ENSNVIG00000018594 #32	LZTS2 (ENSNVIG00000018615) #33	TWNK (ENSNVIG00000018632) #34	B1AL05 (ENSNVIG00000018655) #35	SEMA4G (ENSNVIG00000018660) #36	SLF2 (ENSNVIG00000018711) #37	PAX2 (ENSNVIG00000018769)
Ferret	MODERN SPECIES	187	ENSMPUG00000016874	PSD (ENSMPUG00000016879)	NFKB2 (ENSMPUG00000016882)	GBF1 (ENSMPUG00000016883)	PITX3 (ENSMPUG00000016885)	ELOVL3 (ENSMPUG00000016886)	NOLC1 (ENSMPUG00000016887) #13	PPRC1 (ENSMPUG00000016888) #14	LDB1 (ENSMPUG00000016889) #15	HPS6 (ENSMPUG00000020133) #16	ARMH3 (ENSMPUG00000016890) #17	KCNIP2 (ENSMPUG00000016892) #18	OGA (ENSMPUG00000016893) #19	NPM3 (ENSMPUG00000016894) #20	FGF8 (ENSMPUG00000016897) #21	FBXW4 (ENSMPUG00000016906) #22	DPCD (ENSMPUG00000016919) #23	POLL (ENSMPUG00000016920) #24	BTRC (ENSMPUG00000016923) #25	LBX1 (ENSMPUG00000016926) #27	TLX1 (ENSMPUG00000016927) #28	KAZALD1 (ENSMPUG00000016929) #29	SFXN3 (ENSMPUG00000016930) #30	PDZD7 (ENSMPUG00000016931) #32	LZTS2 (ENSMPUG00000016937) #33	TWNK (ENSMPUG00000016941) #34	MRPL43 (ENSMPUG00000016942) #35	SEMA4G (ENSMPUG00000016946) #36	SLF2 (ENSMPUG00000016953) #37	ENSMPUG00000016954	PAX2 (ENSMPUG00000016955)
Ursidae	ANCESTRAL SPECIES	5	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Giant Panda	MODERN SPECIES	16	PSD (ENSAMEG00000017765)	NFKB2 (ENSAMEG00000017735)	ENSAMEG00000028274	GBF1 (ENSAMEG00000017700)	PITX3 (ENSAMEG00000017698)	ELOVL3 (ENSAMEG00000026429)	NOLC1 (ENSAMEG00000017687) #13	PPRC1 (ENSAMEG00000017685) #14	LDB1 (ENSAMEG00000017674) #15	HPS6 (ENSAMEG00000020223) #16	ARMH3 (ENSAMEG00000017666) #17	KCNIP2 (ENSAMEG00000017648) #18	OGA (ENSAMEG00000017642) #19	ENSAMEG00000017639 #20	FGF8 (ENSAMEG00000017635) #21	FBXW4 (ENSAMEG00000017630) #22	DPCD (ENSAMEG00000017626) #23	POLL (ENSAMEG00000017616) #24	BTRC (ENSAMEG00000017610) #25	LBX1 (ENSAMEG00000025161) #27	TLX1 (ENSAMEG00000017604) #28	KAZALD1 (ENSAMEG00000017599) #29	SFXN3 (ENSAMEG00000017589) #30	PDZD7 (ENSAMEG00000017588) #32	LZTS2 (ENSAMEG00000017581) #33	TWNK (ENSAMEG00000017575) #34	ENSAMEG00000026650	SEMA4G (ENSAMEG00000017555) #36	SLF2 (ENSAMEG00000017539) #37	PAX2 (ENSAMEG00000017523)	NDUFB8 (ENSAMEG00000006651)
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
American black bear	MODERN SPECIES	170													ENSUAMG00000023912 #17	OGA (ENSUAMG00000023914) #19	NPM3 (ENSUAMG00000024072) #20	FBXW4 (ENSUAMG00000024073) #22	DPCD (ENSUAMG00000024074) #23	POLL (ENSUAMG00000024075) #24	BTRC (ENSUAMG00000024076) #25	LBX1 (ENSUAMG00000024077) #27	TLX1 (ENSUAMG00000024078) #28	KAZALD1 (ENSUAMG00000024080) #29
Polar bear	MODERN SPECIES	92	ENSUMAG00000023438	CUEDC2 (ENSUMAG00000023434)	PSD (ENSUMAG00000023417)	NFKB2 (ENSUMAG00000023323)	GBF1 (ENSUMAG00000023098)	ELOVL3 (ENSUMAG00000023071)	NOLC1 (ENSUMAG00000023063) #13	PPRC1 (ENSUMAG00000023041) #14	LDB1 (ENSUMAG00000023036) #15	HPS6 (ENSUMAG00000023035) #16	ENSUMAG00000023033	ARMH3 (ENSUMAG00000023027) #17	KCNIP2 (ENSUMAG00000023021) #18	OGA (ENSUMAG00000023018) #19	NPM3 (ENSUMAG00000023016) #20	FBXW4 (ENSUMAG00000023013) #22	DPCD (ENSUMAG00000023012) #23	POLL (ENSUMAG00000023008) #24	BTRC (ENSUMAG00000023002) #25	SFXN3 (ENSUMAG00000022989) #30	ENSUMAG00000022970 #32	ENSUMAG00000022963 #32	TWNK (ENSUMAG00000022959) #34	MRPL43 (ENSUMAG00000022958) #35	ENSUMAG00000022956 #36	SLF2 (ENSUMAG00000022840) #37	PAX2 (ENSUMAG00000022813)	HIF1AN (ENSUMAG00000022811)	NDUFB8 (ENSUMAG00000022810)	SEC31B (ENSUMAG00000022806)	SCD (ENSUMAG00000022802)
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Cat	MODERN SPECIES	242	CD2H10orf95 (ENSFCAG00000042728)	CUEDC2 (ENSFCAG00000001245)	FBXL15 (ENSFCAG00000001244)	PSD (ENSFCAG00000001243)	NFKB2 (ENSFCAG00000001242)	PITX3 (ENSFCAG00000026758)	GBF1 (ENSFCAG00000001241)	PPRC1 (ENSFCAG00000001238) #14	LDB1 (ENSFCAG00000001236) #15	HPS6 (ENSFCAG00000028998) #16	ARMH3 (ENSFCAG00000013244) #17	KCNIP2 (ENSFCAG00000013243) #18	OGA (ENSFCAG00000007179) #19	NPM3 (ENSFCAG00000007178) #20	FGF8 (ENSFCAG00000007177) #21	FBXW4 (ENSFCAG00000015703) #22	DPCD (ENSFCAG00000037081) #23	POLL (ENSFCAG00000015701) #24	BTRC (ENSFCAG00000015700) #25	LBX1 (ENSFCAG00000034106) #27	TLX1 (ENSFCAG00000046742) #28	KAZALD1 (ENSFCAG00000038365) #29	SFXN3 (ENSFCAG00000015697) #30	PDZD7 (ENSFCAG00000015696) #32	LZTS2 (ENSFCAG00000015695) #33	TWNK (ENSFCAG00000015694) #34	ENSFCAG00000015693	SEMA4G (ENSFCAG00000015692) #36	SLF2 (ENSFCAG00000030202) #37	PAX2 (ENSFCAG00000011602)	HIF1AN (ENSFCAG00000024883)
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
leopard	MODERN SPECIES	33	CUEDC2 (ENSPPRG00000012133)	FBXL15 (ENSPPRG00000012372)	PSD (ENSPPRG00000016125)	NFKB2 (ENSPPRG00000024177)	GBF1 (ENSPPRG00000022832)	PITX3 (ENSPPRG00000000459)	ELOVL3 (ENSPPRG00000000726)	NOLC1 (ENSPPRG00000003072) #13	PPRC1 (ENSPPRG00000004274) #14	LDB1 (ENSPPRG00000004903) #15	ARMH3 (ENSPPRG00000006816) #17	KCNIP2 (ENSPPRG00000008687) #18	OGA (ENSPPRG00000012421) #19	ENSPPRG00000012611 #20	FGF8 (ENSPPRG00000013495) #21	FBXW4 (ENSPPRG00000014010) #22	DPCD (ENSPPRG00000014395) #23	POLL (ENSPPRG00000015944) #24	BTRC (ENSPPRG00000019213) #25	LBX1 (ENSPPRG00000019906) #27	TLX1 (ENSPPRG00000021686) #28	KAZALD1 (ENSPPRG00000025091) #29	SFXN3 (ENSPPRG00000025064) #30	PDZD7 (ENSPPRG00000024966) #32	LZTS2 (ENSPPRG00000024851) #33	TWNK (ENSPPRG00000024792) #34	MRPL43 (ENSPPRG00000024398) #35	SEMA4G (ENSPPRG00000023921) #36	SLF2 (ENSPPRG00000023640) #37	PAX2 (ENSPPRG00000022822)	HIF1AN (ENSPPRG00000022659)
lion	MODERN SPECIES	11	PSD (ENSPLOG00000017905)	NFKB2 (ENSPLOG00000018109)	GBF1 (ENSPLOG00000018201)	PITX3 (ENSPLOG00000018227)	ELOVL3 (ENSPLOG00000018268)	NOLC1 (ENSPLOG00000018322) #13	PPRC1 (ENSPLOG00000018611) #14	LDB1 (ENSPLOG00000018677) #15	HPS6 (ENSPLOG00000018787) #16	ARMH3 (ENSPLOG00000018843) #17	ENSPLOG00000019012	KCNIP2 (ENSPLOG00000004987) #18	OGA (ENSPLOG00000005085) #19	NPM3 (ENSPLOG00000005157) #20	FGF8 (ENSPLOG00000005187) #21	FBXW4 (ENSPLOG00000005224) #22	DPCD (ENSPLOG00000005244) #23	POLL (ENSPLOG00000005264) #24	BTRC (ENSPLOG00000005315) #25	LBX1 (ENSPLOG00000005507) #27	TLX1 (ENSPLOG00000005518) #28	KAZALD1 (ENSPLOG00000005533) #29	SFXN3 (ENSPLOG00000005555) #30	ENSPLOG00000005593 #32	LZTS2 (ENSPLOG00000005627) #33	TWNK (ENSPLOG00000005651) #34	ENSPLOG00000005682	SEMA4G (ENSPLOG00000005704) #36	SLF2 (ENSPLOG00000005756) #37	PAX2 (ENSPLOG00000005810)	HIF1AN (ENSPLOG00000005929)
Tiger	MODERN SPECIES	136	ACTR1A (ENSPTIG00000019111)	MFSD13A (ENSPTIG00000018951)	CUEDC2 (ENSPTIG00000018568)	PSD (ENSPTIG00000018116)	ENSPTIG00000017841	GBF1 (ENSPTIG00000017555)	ENSPTIG00000017198	ELOVL3 (ENSPTIG00000016855)	NOLC1 (ENSPTIG00000014862) #13	PPRC1 (ENSPTIG00000013709) #14	LDB1 (ENSPTIG00000012571) #15	ARMH3 (ENSPTIG00000010893) #17	KCNIP2 (ENSPTIG00000009209) #18	OGA (ENSPTIG00000005989) #19	NPM3 (ENSPTIG00000005390) #20	FBXW4 (ENSPTIG00000004575) #22	DPCD (ENSPTIG00000000972) #23	POLL (ENSPTIG00000021663) #24	BTRC (ENSPTIG00000021271) #25	LBX1 (ENSPTIG00000020484) #27	SFXN3 (ENSPTIG00000020192) #30	ENSPTIG00000019929 #32	TWNK (ENSPTIG00000019662) #34	MRPL43 (ENSPTIG00000019483) #35	SEMA4G (ENSPTIG00000018207) #36	SLF2 (ENSPTIG00000017770) #37	PAX2 (ENSPTIG00000015726)	HIF1AN (ENSPTIG00000014946)	NDUFB8 (ENSPTIG00000013500)	SEC31B (ENSPTIG00000012634)	SCD (ENSPTIG00000012317)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Equus	ANCESTRAL SPECIES	9	ENSGT00940000160968	ENSGT00940000156925.l	ENSGT01050000244965.a.d	ENSGT00940000156925.k	ENSGT00940000161801	ENSGT01050000244965.a.c	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Donkey	MODERN SPECIES	11	ENSEASG00005038682	ENSEASG00005037872	ENSEASG00005030491	ENSEASG00005037516	ENSEASG00005034292	ENSEASG00005010383	NOLC1 (ENSEASG00005007519) #13	PPRC1 (ENSEASG00005007583) #14	LDB1 (ENSEASG00005007592) #15	HPS6 (ENSEASG00005033362) #16	ARMH3 (ENSEASG00005007687) #17	KCNIP2 (ENSEASG00005007921) #18	OGA (ENSEASG00005008004) #19	NPM3 (ENSEASG00005008834) #20	FGF8 (ENSEASG00005008843) #21	FBXW4 (ENSEASG00005008860) #22	DPCD (ENSEASG00005008874) #23	POLL (ENSEASG00005008879) #24	BTRC (ENSEASG00005008887) #25	LBX1 (ENSEASG00005034916) #27	TLX1 (ENSEASG00005008902) #28	KAZALD1 (ENSEASG00005008906) #29	SFXN3 (ENSEASG00005008915) #30	PDZD7 (ENSEASG00005038524) #32	LZTS2 (ENSEASG00005008920) #33	TWNK (ENSEASG00005008922) #34	MRPL43 (ENSEASG00005008925) #35	ENSEASG00005030511	SEMA4G (ENSEASG00005008933) #36	SLF2 (ENSEASG00005008951) #37	PAX2 (ENSEASG00005008965)
Horse	MODERN SPECIES		PSD (ENSECAG00000007172)	FBXL15 (ENSECAG00000000576)	NFKB2 (ENSECAG00000019593)	GBF1 (ENSECAG00000023593)	ENSECAG00000047204	PITX3 (ENSECAG00000022294)	ELOVL3 (ENSECAG00000023578)	NOLC1 (ENSECAG00000052236) #13	PPRC1 (ENSECAG00000009482) #14	LDB1 (ENSECAG00000012948) #15	HPS6 (ENSECAG00000004595) #16	ARMH3 (ENSECAG00000020347) #17	OGA (ENSECAG00000018731) #19	NPM3 (ENSECAG00000007524) #20	FGF8 (ENSECAG00000037372) #21	FBXW4 (ENSECAG00000020477) #22	DPCD (ENSECAG00000009848) #23	POLL (ENSECAG00000015282) #24	BTRC (ENSECAG00000022888) #25	LBX1 (ENSECAG00000032593) #27	TLX1 (ENSECAG00000013342) #28	KAZALD1 (ENSECAG00000013608) #29	SFXN3 (ENSECAG00000019285) #30	PDZD7 (ENSECAG00000012183) #32	LZTS2 (ENSECAG00000013288) #33	TWNK (ENSECAG00000017734) #34	MRPL43 (ENSECAG00000038363) #35	SEMA4G (ENSECAG00000022499) #36	SLF2 (ENSECAG00000011200) #37	PAX2 (ENSECAG00000021123)	HIF1AN (ENSECAG00000009178)
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Megabat	MODERN SPECIES	2006																FBXW4 (ENSPVAG00000006480) #22	DPCD (ENSPVAG00000006479) #23	POLL (ENSPVAG00000006478) #24	BTRC (ENSPVAG00000006474) #25
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Greater horseshoe bat	MODERN SPECIES	7	PSD (ENSRFEG00010017833)	NFKB2 (ENSRFEG00010017892)	GBF1 (ENSRFEG00010017963)	PITX3 (ENSRFEG00010018052)	ELOVL3 (ENSRFEG00010018094)	NOLC1 (ENSRFEG00010018127) #13	PPRC1 (ENSRFEG00010018145) #14	LDB1 (ENSRFEG00010018232) #15	HPS6 (ENSRFEG00010018300) #16	ARMH3 (ENSRFEG00010005361) #17	ENSRFEG00010005540	KCNIP2 (ENSRFEG00010005717) #18	OGA (ENSRFEG00010005973) #19	NPM3 (ENSRFEG00010006055) #20	FGF8 (ENSRFEG00010006132) #21	FBXW4 (ENSRFEG00010006255) #22	DPCD (ENSRFEG00010006295) #23	POLL (ENSRFEG00010006332) #24	BTRC (ENSRFEG00010006446) #25	ENSRFEG00010006625	LBX1 (ENSRFEG00010006637) #27	ENSRFEG00010006650	TLX1 (ENSRFEG00010006681) #28	KAZALD1 (ENSRFEG00010006705) #29	SFXN3 (ENSRFEG00010006745) #30	PDZD7 (ENSRFEG00010006815) #32	ENSRFEG00010006849	LZTS2 (ENSRFEG00010006867) #33	TWNK (ENSRFEG00010006903) #34	MRPL43 (ENSRFEG00010006991) #35	SEMA4G (ENSRFEG00010007019) #36
Microbat	MODERN SPECIES	1099	FBXL15 (ENSMLUG00000006312)	PSD (ENSMLUG00000006298)	NFKB2 (ENSMLUG00000006287)	GBF1 (ENSMLUG00000006247)	ENSMLUG00000028577	PITX3 (ENSMLUG00000023193)	ELOVL3 (ENSMLUG00000028990)	NOLC1 (ENSMLUG00000001726) #13	PPRC1 (ENSMLUG00000006217) #14	LDB1 (ENSMLUG00000009237) #15	ARMH3 (ENSMLUG00000004996) #17	KCNIP2 (ENSMLUG00000004987) #18	OGA (ENSMLUG00000004970) #19	NPM3 (ENSMLUG00000004961) #20	FGF8 (ENSMLUG00000004959) #21	FBXW4 (ENSMLUG00000004952) #22	DPCD (ENSMLUG00000004947) #23	POLL (ENSMLUG00000004944) #24	BTRC (ENSMLUG00000004932) #25
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Suina	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Pig	MODERN SPECIES	5	FBXL15 (ENSSSCG00000038504)	PSD (ENSSSCG00000010581)	NFKB2 (ENSSSCG00000010580)	ENSSSCG00000054273	GBF1 (ENSSSCG00000010579)	PITX3 (ENSSSCG00000010578)	ELOVL3 (ENSSSCG00000010577)	NOLC1 (ENSSSCG00000010576) #13	PPRC1 (ENSSSCG00000010575) #14	LDB1 (ENSSSCG00000010574) #15	ARMH3 (ENSSSCG00000010571) #17	KCNIP2 (ENSSSCG00000010570) #18	OGA (ENSSSCG00000010569) #19	NPM3 (ENSSSCG00000010568) #20	FGF8 (ENSSSCG00000036146) #21	FBXW4 (ENSSSCG00000010566) #22	DPCD (ENSSSCG00000010565) #23	POLL (ENSSSCG00000010564) #24	ENSSSCG00000044625	BTRC (ENSSSCG00000010563) #25	LBX1 (ENSSSCG00000022693) #27	TLX1 (ENSSSCG00000010561) #28	KAZALD1 (ENSSSCG00000022429) #29	SFXN3 (ENSSSCG00000022005) #30	ENSSSCG00000053081	ENSSSCG00000010559 #32	LZTS2 (ENSSSCG00000021798) #33	TWNK (ENSSSCG00000030428) #34	MRPL43 (ENSSSCG00000010560) #35	SEMA4G (ENSSSCG00000029533) #36	SLF2 (ENSSSCG00000037592) #37
Chacoan peccary	MODERN SPECIES	955	CUEDC2 (ENSCWAG00000013653)	FBXL15 (ENSCWAG00000013741)	PSD (ENSCWAG00000013816)	NFKB2 (ENSCWAG00000014044)	GBF1 (ENSCWAG00000014118)	PITX3 (ENSCWAG00000014269)	ELOVL3 (ENSCWAG00000014311)	PPRC1 (ENSCWAG00000014410) #14	LDB1 (ENSCWAG00000015033) #15	HPS6 (ENSCWAG00000015092) #16	ARMH3 (ENSCWAG00000015108) #17	KCNIP2 (ENSCWAG00000015234) #18	OGA (ENSCWAG00000016757) #19	NPM3 (ENSCWAG00000016863) #20	FGF8 (ENSCWAG00000016899) #21	FBXW4 (ENSCWAG00000017072) #22	DPCD (ENSCWAG00000017144) #23	POLL (ENSCWAG00000017186) #24	BTRC (ENSCWAG00000017438) #25	LBX1 (ENSCWAG00000017504) #27	TLX1 (ENSCWAG00000017532) #28	KAZALD1 (ENSCWAG00000017546) #29	SFXN3 (ENSCWAG00000017574) #30	PDZD7 (ENSCWAG00000017620) #32	ENSCWAG00000017773	LZTS2 (ENSCWAG00000017792) #33	TWNK (ENSCWAG00000017826) #34	MRPL43 (ENSCWAG00000017917) #35	SEMA4G (ENSCWAG00000017948) #36	SLF2 (ENSCWAG00000017985) #37	PAX2 (ENSCWAG00000018087)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00960000190004	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Beluga whale	MODERN SPECIES	65	NFKB2 (ENSDLEG00000010672)	GBF1 (ENSDLEG00000010758)	PITX3 (ENSDLEG00000011013)	ELOVL3 (ENSDLEG00000011030)	ENSDLEG00000011076	NOLC1 (ENSDLEG00000011092) #13	ENSDLEG00000011138	PPRC1 (ENSDLEG00000011163) #14	LDB1 (ENSDLEG00000011231) #15	HPS6 (ENSDLEG00000011254) #16	ARMH3 (ENSDLEG00000011308) #17	KCNIP2 (ENSDLEG00000011996) #18	MGEA5 (ENSDLEG00000012761) #19	NPM3 (ENSDLEG00000014430) #20	FGF8 (ENSDLEG00000014445) #21	FBXW4 (ENSDLEG00000014542) #22	DPCD (ENSDLEG00000014637) #23	POLL (ENSDLEG00000014662) #24	BTRC (ENSDLEG00000014853) #25	ENSDLEG00000016243	LBX1 (ENSDLEG00000016256) #27	ENSDLEG00000016263	TLX1 (ENSDLEG00000016266) #28	KAZALD1 (ENSDLEG00000016276) #29	SFXN3 (ENSDLEG00000016287) #30	ENSDLEG00000016313 #32	ENSDLEG00000016332 #32	LZTS2 (ENSDLEG00000016343) #33	TWNK (ENSDLEG00000016357) #34	MRPL43 (ENSDLEG00000016373) #35	SEMA4G (ENSDLEG00000016385) #36
Narwhal	MODERN SPECIES	311	NFKB2 (ENSMMNG00015013070)	GBF1 (ENSMMNG00015013050)	PITX3 (ENSMMNG00015013029)	ELOVL3 (ENSMMNG00015013018)	ENSMMNG00015013008	ENSMMNG00015013002	NOLC1 (ENSMMNG00015012973) #13	PPRC1 (ENSMMNG00015012955) #14	LDB1 (ENSMMNG00015012934) #15	HPS6 (ENSMMNG00015012924) #16	ARMH3 (ENSMMNG00015012888) #17	KCNIP2 (ENSMMNG00015012789) #18	OGA (ENSMMNG00015012693) #19	NPM3 (ENSMMNG00015012666) #20	FGF8 (ENSMMNG00015012625) #21	FBXW4 (ENSMMNG00015012596) #22	DPCD (ENSMMNG00015012580) #23	POLL (ENSMMNG00015012562) #24	ENSMMNG00015012545	BTRC (ENSMMNG00015012491) #25	LBX1 (ENSMMNG00015012454) #27	ENSMMNG00015012448	TLX1 (ENSMMNG00015012435) #28	KAZALD1 (ENSMMNG00015012419) #29	SFXN3 (ENSMMNG00015012374) #30	PDZD7 (ENSMMNG00015012332) #32	LZTS2 (ENSMMNG00015012307) #33	TWNK (ENSMMNG00015012283) #34	MRPL43 (ENSMMNG00015012273) #35	SEMA4G (ENSMMNG00015012260) #36	SLF2 (ENSMMNG00015012230) #37
Vaquita	MODERN SPECIES	7	FBXL15 (ENSPSNG00000017495)	PSD (ENSPSNG00000017329)	NFKB2 (ENSPSNG00000017232)	GBF1 (ENSPSNG00000017028)	PITX3 (ENSPSNG00000016915)	ELOVL3 (ENSPSNG00000016876)	NOLC1 (ENSPSNG00000016800) #13	PPRC1 (ENSPSNG00000016660) #14	LDB1 (ENSPSNG00000016526) #15	HPS6 (ENSPSNG00000016490) #16	ARMH3 (ENSPSNG00000016447) #17	KCNIP2 (ENSPSNG00000015521) #18	OGA (ENSPSNG00000015199) #19	NPM3 (ENSPSNG00000015111) #20	FGF8 (ENSPSNG00000014763) #21	FBXW4 (ENSPSNG00000014655) #22	DPCD (ENSPSNG00000014573) #23	POLL (ENSPSNG00000014325) #24	ENSPSNG00000014239	BTRC (ENSPSNG00000013992) #25	LBX1 (ENSPSNG00000013867) #27	ENSPSNG00000013837	TLX1 (ENSPSNG00000013783) #28	KAZALD1 (ENSPSNG00000013727) #29	SFXN3 (ENSPSNG00000013687) #30	ENSPSNG00000013625 #32	ENSPSNG00000013544 #32	LZTS2 (ENSPSNG00000013492) #33	TWNK (ENSPSNG00000013395) #34	MRPL43 (ENSPSNG00000013369) #35	SEMA4G (ENSPSNG00000013294) #36
Dolphin	MODERN SPECIES	582								NOLC1 (ENSTTRG00000014974) #13	PPRC1 (ENSTTRG00000014966) #14	ENSTTRG00000014960 #15	ARMH3 (ENSTTRG00000014955) #17	KCNIP2 (ENSTTRG00000014952) #18	OGA (ENSTTRG00000014946) #19	ENSTTRG00000014942	FGF8 (ENSTTRG00000014939) #21	FBXW4 (ENSTTRG00000014933) #22	DPCD (ENSTTRG00000014929) #23	POLL (ENSTTRG00000014923) #24	BTRC (ENSTTRG00000014908) #25	LBX1 (ENSTTRG00000014899) #27
Sperm whale	MODERN SPECIES	12	WBP1L (ENSPCTG00005020108)	ARL3 (ENSPCTG00005020073)	GBF1 (ENSPCTG00005019758)	NFKB2 (ENSPCTG00005019685)	PSD (ENSPCTG00005019477)	FBXL15 (ENSPCTG00005019435)	CUEDC2 (ENSPCTG00005019392)	MFSD13A (ENSPCTG00005019320)	ACTR1A (ENSPCTG00005019239)	ENSPCTG00005019221	NOLC1 (ENSPCTG00005019168) #13	OGA (ENSPCTG00005019093) #19	LDB1 (ENSPCTG00005019052) #15	HPS6 (ENSPCTG00005019039) #16	ARMH3 (ENSPCTG00005018935) #17	FBXW4 (ENSPCTG00005018820) #22	DPCD (ENSPCTG00005018790) #23	POLL (ENSPCTG00005018631) #24	ENSPCTG00005018571	BTRC (ENSPCTG00005018325) #25	KAZALD1 (ENSPCTG00005018258) #29	SLF2 (ENSPCTG00005018174) #37	PAX2 (ENSPCTG00005017976)	HIF1AN (ENSPCTG00005017931)	NDUFB8 (ENSPCTG00005017856)	SEC31B (ENSPCTG00005017805)	WNT8B (ENSPCTG00005017722)	SCD (ENSPCTG00005017655)	BLOC1S2 (ENSPCTG00005017426)	CWF19L1 (ENSPCTG00005017347)	CHUK (ENSPCTG00005017211)
Blue whale	MODERN SPECIES	7	PSD (ENSBMSG00010015899)	ENSBMSG00010016052	GBF1 (ENSBMSG00010016085)	PITX3 (ENSBMSG00010016125)	ELOVL3 (ENSBMSG00010016149)	NOLC1 (ENSBMSG00010016181) #13	ENSBMSG00010016224	PPRC1 (ENSBMSG00010016252) #14	LDB1 (ENSBMSG00010016310) #15	HPS6 (ENSBMSG00010016356) #16	ARMH3 (ENSBMSG00010016376) #17	KCNIP2 (ENSBMSG00010016543) #18	OGA (ENSBMSG00010018215) #19	NPM3 (ENSBMSG00010018271) #20	FGF8 (ENSBMSG00010018314) #21	FBXW4 (ENSBMSG00010018485) #22	DPCD (ENSBMSG00010018596) #23	POLL (ENSBMSG00010018641) #24	BTRC (ENSBMSG00010018955) #25	ENSBMSG00010019090	LBX1 (ENSBMSG00010019122) #27	TLX1 (ENSBMSG00010019148) #28	KAZALD1 (ENSBMSG00010019182) #29	SFXN3 (ENSBMSG00010019238) #30	PDZD7 (ENSBMSG00010019325) #32	LZTS2 (ENSBMSG00010019532) #33	TWNK (ENSBMSG00010019580) #34	MRPL43 (ENSBMSG00010019656) #35	SEMA4G (ENSBMSG00010019680) #36	SLF2 (ENSBMSG00010019778) #37	PAX2 (ENSBMSG00010019829)
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Goat	MODERN SPECIES	18	PSD (ENSCHIG00000016284)	NFKB2 (ENSCHIG00000019967)	GBF1 (ENSCHIG00000006795)	PITX3 (ENSCHIG00000005050)	ELOVL3 (ENSCHIG00000020567)	NOLC1 (ENSCHIG00000016755) #13	PPRC1 (ENSCHIG00000011471) #14	LDB1 (ENSCHIG00000012111) #15	ENSCHIG00000016117	HPS6 (ENSCHIG00000002581) #16	ARMH3 (ENSCHIG00000021008) #17	KCNIP2 (ENSCHIG00000023969) #18	OGA (ENSCHIG00000012695) #19	ENSCHIG00000024055 #20	FGF8 (ENSCHIG00000016976) #21	FBXW4 (ENSCHIG00000018380) #22	DPCD (ENSCHIG00000020911) #23	POLL (ENSCHIG00000003400) #24	BTRC (ENSCHIG00000016955) #25	LBX1 (ENSCHIG00000023740) #27	TLX1 (ENSCHIG00000017143) #28	KAZALD1 (ENSCHIG00000020364) #29	SFXN3 (ENSCHIG00000007598) #30	PDZD7 (ENSCHIG00000003600) #32	LZTS2 (ENSCHIG00000017763) #33	TWNK (ENSCHIG00000010638) #34	MRPL43 (ENSCHIG00000023474) #35	SEMA4G (ENSCHIG00000017686) #36	SLF2 (ENSCHIG00000020908) #37	PAX2 (ENSCHIG00000026895)	HIF1AN (ENSCHIG00000015131)
Rambouillet Sheep	MODERN SPECIES	14	PSD (ENSOARG00020025517)	NFKB2 (ENSOARG00020025505)	GBF1 (ENSOARG00020025489)	PITX3 (ENSOARG00020025475)	ELOVL3 (ENSOARG00020025469)	NOLC1 (ENSOARG00020025460) #13	PPRC1 (ENSOARG00020025416) #14	LDB1 (ENSOARG00020025397) #15	HPS6 (ENSOARG00020025382) #16	ARMH3 (ENSOARG00020025366) #17	KCNIP2 (ENSOARG00020025029) #18	OGA (ENSOARG00020024941) #19	NPM3 (ENSOARG00020024924) #20	FGF8 (ENSOARG00020024835) #21	ENSOARG00020024820	FBXW4 (ENSOARG00020024790) #22	DPCD (ENSOARG00020024779) #23	POLL (ENSOARG00020024664) #24	BTRC (ENSOARG00020024573) #25	LBX1 (ENSOARG00020024551) #27	TLX1 (ENSOARG00020024541) #28	KAZALD1 (ENSOARG00020024525) #29	SFXN3 (ENSOARG00020024496) #30	ENSOARG00020024454 #32	LZTS2 (ENSOARG00020024436) #33	TWNK (ENSOARG00020024387) #34	MRPL43 (ENSOARG00020024355) #35	SEMA4G (ENSOARG00020024295) #36	SLF2 (ENSOARG00020024229) #37	PAX2 (ENSOARG00020024007)	HIF1AN (ENSOARG00020023988)
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Bos	ANCESTRAL SPECIES	23	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Domestic yak	MODERN SPECIES	17	NFKB2 (ENSBGRG00000026174)	GBF1 (ENSBGRG00000026160)	PITX3 (ENSBGRG00000026147)	ELOVL3 (ENSBGRG00000026140)	ENSBGRG00000026136	NOLC1 (ENSBGRG00000026111) #13	PPRC1 (ENSBGRG00000026069) #14	LDB1 (ENSBGRG00000026032) #15	HPS6 (ENSBGRG00000026028) #16	ARMH3 (ENSBGRG00000026018) #17	ENSBGRG00000026004	KCNIP2 (ENSBGRG00000025831) #18	OGA (ENSBGRG00000025769) #19	NPM3 (ENSBGRG00000025751) #20	FGF8 (ENSBGRG00000025705) #21	FBXW4 (ENSBGRG00000025687) #22	DPCD (ENSBGRG00000025670) #23	POLL (ENSBGRG00000025605) #24	BTRC (ENSBGRG00000025472) #25	LBX1 (ENSBGRG00000025446) #27	TLX1 (ENSBGRG00000025436) #28	KAZALD1 (ENSBGRG00000025398) #29	SFXN3 (ENSBGRG00000025373) #30	PDZD7 (ENSBGRG00000025335) #32	LZTS2 (ENSBGRG00000025304) #33	TWNK (ENSBGRG00000025268) #34	MRPL43 (ENSBGRG00000025253) #35	SEMA4G (ENSBGRG00000025220) #36	SLF2 (ENSBGRG00000025048) #37	ENSBGRG00000024942	HIF1AN (ENSBGRG00000024908)
Wild yak	MODERN SPECIES	124	FBXL15 (ENSBMUG00000001578)	PSD (ENSBMUG00000001599)	NFKB2 (ENSBMUG00000001725)	GBF1 (ENSBMUG00000001789)	PITX3 (ENSBMUG00000001811)	ELOVL3 (ENSBMUG00000001815)	NOLC1 (ENSBMUG00000001853) #13	PPRC1 (ENSBMUG00000001946) #14	LDB1 (ENSBMUG00000001990) #15	HPS6 (ENSBMUG00000002004) #16	ARMH3 (ENSBMUG00000002100) #17	KCNIP2 (ENSBMUG00000002276) #18	OGA (ENSBMUG00000002507) #19	NPM3 (ENSBMUG00000002562) #20	FGF8 (ENSBMUG00000002582) #21	FBXW4 (ENSBMUG00000002636) #22	DPCD (ENSBMUG00000002662) #23	POLL (ENSBMUG00000002781) #24	BTRC (ENSBMUG00000002953) #25	TLX1 (ENSBMUG00000002998) #28	ENSBMUG00000003033 #29	SFXN3 (ENSBMUG00000003051) #30	PDZD7 (ENSBMUG00000003120) #32	LZTS2 (ENSBMUG00000003163) #33	TWNK (ENSBMUG00000003170) #34	MRPL43 (ENSBMUG00000003186) #35	SEMA4G (ENSBMUG00000003213) #36	SLF2 (ENSBMUG00000003264) #37	PAX2 (ENSBMUG00000003356)	HIF1AN (ENSBMUG00000003393)	ENSBMUG00000003406
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Hybrid Bos Indicus	MODERN SPECIES	18	FBXL15 (ENSBIXG00005012972)	PSD (ENSBIXG00005012950)	NFKB2 (ENSBIXG00005012914)	GBF1 (ENSBIXG00005012824)	PITX3 (ENSBIXG00005012731)	ELOVL3 (ENSBIXG00005001400)	NOLC1 (ENSBIXG00005005482) #13	PPRC1 (ENSBIXG00005012646) #14	LDB1 (ENSBIXG00005012537) #15	HPS6 (ENSBIXG00005000333) #16	ARMH3 (ENSBIXG00005012509) #17	KCNIP2 (ENSBIXG00005012451) #18	OGA (ENSBIXG00005001256) #19	NPM3 (ENSBIXG00005012095) #20	FGF8 (ENSBIXG00005012077) #21	FBXW4 (ENSBIXG00005012014) #22	ENSBIXG00005001225	DPCD (ENSBIXG00005011989) #23	POLL (ENSBIXG00005000418) #24	BTRC (ENSBIXG00005011868) #25	LBX1 (ENSBIXG00005011727) #27	TLX1 (ENSBIXG00005001152) #28	KAZALD1 (ENSBIXG00005011702) #29	SFXN3 (ENSBIXG00005011674) #30	PDZD7 (ENSBIXG00005011644) #32	LZTS2 (ENSBIXG00005001135) #33	SEMA4G (ENSBIXG00005011547) #36	MRPL43 (ENSBIXG00005011491) #35	SLF2 (ENSBIXG00005011450) #37	PAX2 (ENSBIXG00005011389)	HIF1AN (ENSBIXG00005011295)
Cow	MODERN SPECIES	18	PSD (ENSBTAG00000003580)	NFKB2 (ENSBTAG00000006017)	GBF1 (ENSBTAG00000006014)	PITX3 (ENSBTAG00000015702)	ELOVL3 (ENSBTAG00000015700)	NOLC1 (ENSBTAG00000007435) #13	PPRC1 (ENSBTAG00000007427) #14	LDB1 (ENSBTAG00000005780) #15	HPS6 (ENSBTAG00000021942) #16	ARMH3 (ENSBTAG00000013120) #17	KCNIP2 (ENSBTAG00000016343) #18	OGA (ENSBTAG00000016336) #19	NPM3 (ENSBTAG00000016335) #20	FGF8 (ENSBTAG00000001530) #21	ENSBTAG00000053939	FBXW4 (ENSBTAG00000003579) #22	DPCD (ENSBTAG00000003578) #23	POLL (ENSBTAG00000003576) #24	BTRC (ENSBTAG00000007476) #25	LBX1 (ENSBTAG00000002261) #27	TLX1 (ENSBTAG00000011080) #28	KAZALD1 (ENSBTAG00000011489) #29	SFXN3 (ENSBTAG00000005015) #30	ENSBTAG00000016928 #32	ENSBTAG00000039834 #32	LZTS2 (ENSBTAG00000003298) #33	TWNK (ENSBTAG00000003296) #34	MRPL43 (ENSBTAG00000003294) #35	SEMA4G (ENSBTAG00000018604) #36	SLF2 (ENSBTAG00000012077) #37	PAX2 (ENSBTAG00000021566)
American bison	MODERN SPECIES	3316	PSD (ENSBBBG00000022390)	ENSBBBG00000022351	NFKB2 (ENSBBBG00000005894)	GBF1 (ENSBBBG00000022275)	PITX3 (ENSBBBG00000022213)	ELOVL3 (ENSBBBG00000022200)	NOLC1 (ENSBBBG00000005854) #13	PPRC1 (ENSBBBG00000007281) #14	LDB1 (ENSBBBG00000005829) #15	HPS6 (ENSBBBG00000022074) #16	ARMH3 (ENSBBBG00000007684) #17	KCNIP2 (ENSBBBG00000022027) #18	OGA (ENSBBBG00000005781) #19	NPM3 (ENSBBBG00000021685) #20	FGF8 (ENSBBBG00000005761) #21	FBXW4 (ENSBBBG00000021667) #22	DPCD (ENSBBBG00000021651) #23	POLL (ENSBBBG00000021635) #24	BTRC (ENSBBBG00000021525) #25	LBX1 (ENSBBBG00000021437) #27	TLX1 (ENSBBBG00000021434) #28	KAZALD1 (ENSBBBG00000021426) #29	SFXN3 (ENSBBBG00000021411) #30	PDZD7 (ENSBBBG00000021381) #32	LZTS2 (ENSBBBG00000005695) #33	TWNK (ENSBBBG00000008401) #34	MRPL43 (ENSBBBG00000021273) #35	SEMA4G (ENSBBBG00000007106) #36	SLF2 (ENSBBBG00000021234) #37	PAX2 (ENSBBBG00000021192)	HIF1AN (ENSBBBG00000021073)
Siberian musk deer	MODERN SPECIES	1162	FBXL15 (ENSMMSG00000023546)	PSD (ENSMMSG00000023561)	NFKB2 (ENSMMSG00000023577)	GBF1 (ENSMMSG00000023605)	PITX3 (ENSMMSG00000023635)	ELOVL3 (ENSMMSG00000023638)	NOLC1 (ENSMMSG00000023644) #13	PPRC1 (ENSMMSG00000023667) #14	LDB1 (ENSMMSG00000023714) #15	HPS6 (ENSMMSG00000023722) #16	ARMH3 (ENSMMSG00000023729) #17	KCNIP2 (ENSMMSG00000023762) #18	OGA (ENSMMSG00000023879) #19	NPM3 (ENSMMSG00000023905) #20	FGF8 (ENSMMSG00000016398) #21	FBXW4 (ENSMMSG00000016591) #22	DPCD (ENSMMSG00000016659) #23	POLL (ENSMMSG00000016722) #24	BTRC (ENSMMSG00000016899) #25	ENSMMSG00000017075	ENSMMSG00000017086	LBX1 (ENSMMSG00000017109) #27	ENSMMSG00000017131	TLX1 (ENSMMSG00000017162) #28	KAZALD1 (ENSMMSG00000017194) #29	SFXN3 (ENSMMSG00000017226) #30	PDZD7 (ENSMMSG00000017297) #32	LZTS2 (ENSMMSG00000017542) #33	TWNK (ENSMMSG00000017581) #34	MRPL43 (ENSMMSG00000017635) #35	SEMA4G (ENSMMSG00000017665) #36
Yarkand deer	MODERN SPECIES	6	PSD (ENSCHYG00000013510)	NFKB2 (ENSCHYG00000013218)	ENSCHYG00000013154	GBF1 (ENSCHYG00000012906)	PITX3 (ENSCHYG00000012861)	ELOVL3 (ENSCHYG00000012788)	NOLC1 (ENSCHYG00000012710) #13	PPRC1 (ENSCHYG00000012117) #14	LDB1 (ENSCHYG00000011992) #15	HPS6 (ENSCHYG00000011978) #16	ARMH3 (ENSCHYG00000011524) #17	KCNIP2 (ENSCHYG00000011315) #18	OGA (ENSCHYG00000011095) #19	NPM3 (ENSCHYG00000011000) #20	FGF8 (ENSCHYG00000010585) #21	FBXW4 (ENSCHYG00000010417) #22	DPCD (ENSCHYG00000010353) #23	POLL (ENSCHYG00000010092) #24	BTRC (ENSCHYG00000009464) #25	LBX1 (ENSCHYG00000009391) #27	TLX1 (ENSCHYG00000009316) #28	KAZALD1 (ENSCHYG00000009247) #29	SFXN3 (ENSCHYG00000008801) #30	PDZD7 (ENSCHYG00000008700) #32	LZTS2 (ENSCHYG00000008636) #33	TWNK (ENSCHYG00000008578) #34	MRPL43 (ENSCHYG00000008553) #35	SEMA4G (ENSCHYG00000008501) #36	SLF2 (ENSCHYG00000008313) #37	PAX2 (ENSCHYG00000008121)	HIF1AN (ENSCHYG00000008087)
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Alpaca	MODERN SPECIES	1686													ARMH3 (ENSVPAG00000003122) #17	OGA (ENSVPAG00000003121) #19	NPM3 (ENSVPAG00000003120) #20	ENSVPAG00000003119 #22	DPCD (ENSVPAG00000003117) #23	POLL (ENSVPAG00000003115) #24	BTRC (ENSVPAG00000003111) #25
Arabian camel	MODERN SPECIES	2	PSD (ENSCDRG00005014081)	NFKB2 (ENSCDRG00005014133)	GBF1 (ENSCDRG00005014219)	PITX3 (ENSCDRG00005014430)	ELOVL3 (ENSCDRG00005014459)	ENSCDRG00005014525	NOLC1 (ENSCDRG00005014563) #13	PPRC1 (ENSCDRG00005014648) #14	LDB1 (ENSCDRG00005014831) #15	HPS6 (ENSCDRG00005014897) #16	ARMH3 (ENSCDRG00005014932) #17	KCNIP2 (ENSCDRG00005015279) #18	OGA (ENSCDRG00005017195) #19	NPM3 (ENSCDRG00005017294) #20	FGF8 (ENSCDRG00005017350) #21	FBXW4 (ENSCDRG00005017631) #22	DPCD (ENSCDRG00005017701) #23	POLL (ENSCDRG00005017726) #24	BTRC (ENSCDRG00005017970) #25	LBX1 (ENSCDRG00005018112) #27	TLX1 (ENSCDRG00005018131) #28	KAZALD1 (ENSCDRG00005018151) #29	SFXN3 (ENSCDRG00005018164) #30	ENSCDRG00005018196 #32	ENSCDRG00005018229 #32	LZTS2 (ENSCDRG00005018247) #33	TWNK (ENSCDRG00005018275) #34	MRPL43 (ENSCDRG00005018344) #35	SEMA4G (ENSCDRG00005018391) #36	SLF2 (ENSCDRG00005018469) #37	ENSCDRG00005018552
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Xenarthra	ANCESTRAL SPECIES	1135																ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25
Sloth	MODERN SPECIES	5400																FBXW4 (ENSCHOG00000008248) #22	DPCD (ENSCHOG00000008238) #23
Armadillo	MODERN SPECIES	1689																FBXW4 (ENSDNOG00000039812) #22	DPCD (ENSDNOG00000042220) #23	POLL (ENSDNOG00000037866) #24	BTRC (ENSDNOG00000019257) #25	ENSDNOG00000017923	ENSDNOG00000035478	LBX1 (ENSDNOG00000032737) #27	ENSDNOG00000004057	TLX1 (ENSDNOG00000039087) #28
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Tenrec	MODERN SPECIES	5876																FBXW4 (ENSETEG00000018358) #22	DPCD (ENSETEG00000018356) #23	POLL (ENSETEG00000018352) #24
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b	ENSGT00940000157409
Hyrax	MODERN SPECIES	4971																FBXW4 (ENSPCAG00000004870) #22	DPCD (ENSPCAG00000004838) #23	POLL (ENSPCAG00000004785) #24	BTRC (ENSPCAG00000004714) #25
Elephant	MODERN SPECIES	3	FBXL15 (ENSLAFG00000006822)	PSD (ENSLAFG00000006814)	NFKB2 (ENSLAFG00000006805)	GBF1 (ENSLAFG00000006789)	PITX3 (ENSLAFG00000006787)	ELOVL3 (ENSLAFG00000006785)	NOLC1 (ENSLAFG00000014245) #13	PPRC1 (ENSLAFG00000014232) #14	LDB1 (ENSLAFG00000023028) #15	HPS6 (ENSLAFG00000026941) #16	ARMH3 (ENSLAFG00000016076) #17	KCNIP2 (ENSLAFG00000016066) #18	OGA (ENSLAFG00000016050) #19	NPM3 (ENSLAFG00000023022) #20	FGF8 (ENSLAFG00000028373) #21	FBXW4 (ENSLAFG00000009480) #22	DPCD (ENSLAFG00000009478) #23	POLL (ENSLAFG00000009472) #24	BTRC (ENSLAFG00000017122) #25	LBX1 (ENSLAFG00000012214) #27	TLX1 (ENSLAFG00000004179) #28	ENSLAFG00000030369	KAZALD1 (ENSLAFG00000004171) #29	SFXN3 (ENSLAFG00000012767) #30	ENSLAFG00000026596 #32	ENSLAFG00000032509 #32	LZTS2 (ENSLAFG00000009975) #33	TWNK (ENSLAFG00000015859) #34	MRPL43 (ENSLAFG00000028961) #35	ENSLAFG00000005967 #36	SLF2 (ENSLAFG00000005877) #37
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.k #30	ENSGT00990000203892	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000157412.b
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.k #30	ENSGT00990000203892	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00940000154903
Wallaby	MODERN SPECIES	7320																ENSMEUG00000004074 #22	DPCD (ENSMEUG00000004066) #23	POLL (ENSMEUG00000004057) #24
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092 #13	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.k #30	ENSGT00990000203892	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00940000154903
Common wonbat	MODERN SPECIES	581	FBXL15 (ENSVURG00010001595)	PSD (ENSVURG00010001616)	NFKB2 (ENSVURG00010001689)	GBF1 (ENSVURG00010001734)	PITX3 (ENSVURG00010001798)	ELOVL3 (ENSVURG00010001812)	NOLC1 (ENSVURG00010001912) #13	ENSVURG00010001928 #14	LDB1 (ENSVURG00010001956) #15	HPS6 (ENSVURG00010002006) #16	ARMH3 (ENSVURG00010002048) #17	KCNIP2 (ENSVURG00010002189) #18	OGA (ENSVURG00010002511) #19	NPM3 (ENSVURG00010002534) #20	FGF8 (ENSVURG00010002548) #21	ENSVURG00010002614 #22	DPCD (ENSVURG00010002630) #23	POLL (ENSVURG00010002645) #24	BTRC (ENSVURG00010002745) #25	LBX1 (ENSVURG00010002823) #27	TLX1 (ENSVURG00010002839) #28	KAZALD1 (ENSVURG00010002921) #29	ENSVURG00010002939 #32	LZTS2 (ENSVURG00010002997) #33	TWNK (ENSVURG00010003014) #34	MRPL43 (ENSVURG00010003032) #35	SEMA4G (ENSVURG00010003048) #36	ENSVURG00010003115 #37	PAX2 (ENSVURG00010003166)	ENSVURG00010003240	HIF1AN (ENSVURG00010003265)
koala	MODERN SPECIES	6	CUEDC2 (ENSPCIG00000028992)	FBXL15 (ENSPCIG00000028994)	PSD (ENSPCIG00000028997)	NFKB2 (ENSPCIG00000028999)	GBF1 (ENSPCIG00000029004)	PITX3 (ENSPCIG00000029009)	ELOVL3 (ENSPCIG00000029010)	NOLC1 (ENSPCIG00000029012) #13	ENSPCIG00000029013 #14	LDB1 (ENSPCIG00000029016) #15	HPS6 (ENSPCIG00000029018) #16	ARMH3 (ENSPCIG00000029021) #17	KCNIP2 (ENSPCIG00000029025) #18	OGA (ENSPCIG00000009619) #19	FGF8 (ENSPCIG00000009616) #21	FBXW4 (ENSPCIG00000029029) #22	DPCD (ENSPCIG00000029028) #23	POLL (ENSPCIG00000029031) #24	BTRC (ENSPCIG00000029037) #25	LBX1 (ENSPCIG00000012981) #27	TLX1 (ENSPCIG00000031947) #28	KAZALD1 (ENSPCIG00000003284) #29	ENSPCIG00000002751 #30	ENSPCIG00000002730	PDZD7 (ENSPCIG00000002702) #32	LZTS2 (ENSPCIG00000002692) #33	TWNK (ENSPCIG00000002680) #34	MRPL43 (ENSPCIG00000031987) #35	SEMA4G (ENSPCIG00000002663) #36	ENSPCIG00000001129 #37	PAX2 (ENSPCIG00000001066)
Tasmanian devil	MODERN SPECIES	1	FBXL15 (ENSSHAG00000028197)	PSD (ENSSHAG00000018843)	NFKB2 (ENSSHAG00000018852)	GBF1 (ENSSHAG00000018856)	PITX3 (ENSSHAG00000027003)	ELOVL3 (ENSSHAG00000018892)	NOLC1 (ENSSHAG00000002222) #13	ENSSHAG00000003350 #14	LDB1 (ENSSHAG00000004146) #15	HPS6 (ENSSHAG00000020530) #16	ARMH3 (ENSSHAG00000005390) #17	KCNIP2 (ENSSHAG00000026676) #18	OGA (ENSSHAG00000008257) #19	NPM3 (ENSSHAG00000008567) #20	FGF8 (ENSSHAG00000008652) #21	FBXW4 (ENSSHAG00000009269) #22	DPCD (ENSSHAG00000025520) #23	POLL (ENSSHAG00000010289) #24	BTRC (ENSSHAG00000010653) #25	LBX1 (ENSSHAG00000012692) #27	TLX1 (ENSSHAG00000026892) #28	KAZALD1 (ENSSHAG00000031990) #29	SFXN3 (ENSSHAG00000025221) #30	PDZD7 (ENSSHAG00000013654) #32	LZTS2 (ENSSHAG00000013716) #33	MRPL43 (ENSSHAG00000027764) #35	SEMA4G (ENSSHAG00000024320) #36	ENSSHAG00000001085 #37	PAX2 (ENSSHAG00000014328)	HIF1AN (ENSSHAG00000026157)	ENSSHAG00000015389
Opossum	MODERN SPECIES		PSD (ENSMODG00000011313)	ENSMODG00000049569	GBF1 (ENSMODG00000011370)	ENSMODG00000011378	PITX3 (ENSMODG00000045989)	NOLC1 (ENSMODG00000011434) #13	ENSMODG00000011467 #14	LDB1 (ENSMODG00000011500) #15	HPS6 (ENSMODG00000049767) #16	ARMH3 (ENSMODG00000011512) #17	ENSMODG00000019596	KCNIP2 (ENSMODG00000011638) #18	OGA (ENSMODG00000011681) #19	NPM3 (ENSMODG00000011689) #20	FGF8 (ENSMODG00000011718) #21	FBXW4 (ENSMODG00000011732) #22	DPCD (ENSMODG00000011742) #23	POLL (ENSMODG00000011757) #24	BTRC (ENSMODG00000011788) #25	ENSMODG00000027979	ENSMODG00000046533	LBX1 (ENSMODG00000044699) #27	TLX1 (ENSMODG00000011900) #28	KAZALD1 (ENSMODG00000011907) #29	SFXN3 (ENSMODG00000011922) #30	ENSMODG00000045652 #32	ENSMODG00000011937 #32	LZTS2 (ENSMODG00000011955) #33	TWNK (ENSMODG00000011966) #34	MRPL43 (ENSMODG00000011975) #35	SEMA4G (ENSMODG00000011993) #36
Platypus	MODERN SPECIES	7	CUEDC2 (ENSOANG00000001988)	FBXL15 (ENSOANG00000001987)	PSD (ENSOANG00000044398)	NFKB2 (ENSOANG00000006254)	GBF1 (ENSOANG00000007818)	PITX3 (ENSOANG00000039250)	ELOVL3 (ENSOANG00000007823)	NOLC1 (ENSOANG00000007824) #13	ENSOANG00000007826 #14	LDB1 (ENSOANG00000007827) #15	ARMH3 (ENSOANG00000007830) #17	KCNIP2 (ENSOANG00000039579) #18	OGA (ENSOANG00000004474) #19	NPM3 (ENSOANG00000039490) #20	FGF8 (ENSOANG00000048473) #21	FBXW4 (ENSOANG00000007313) #22	DPCD (ENSOANG00000045090) #23	POLL (ENSOANG00000007315) #24	BTRC (ENSOANG00000007316) #25	LBX1 (ENSOANG00000044340) #27	TLX1 (ENSOANG00000007318) #28	KAZALD1 (ENSOANG00000047060) #29	SFXN3 (ENSOANG00000007319) #30	PDZD7 (ENSOANG00000007308) #32	LZTS2 (ENSOANG00000046553) #33	ENSOANG00000042089 #34	ENSOANG00000007325 #34	ENSOANG00000007326 #34	ENSOANG00000042676	SEMA4G (ENSOANG00000007328) #36	ENSOANG00000007329 #37
Sauria	ANCESTRAL SPECIES	8	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00390000013106	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Archosauria	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT01030000235534	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Aves	ANCESTRAL SPECIES	6	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Neognathae	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Great tit	MODERN SPECIES	26	ENSPMJG00000004385	RRP12 (ENSPMJG00000004387)	ARHGAP19 (ENSPMJG00000004396)	SLIT1 (ENSPMJG00000004400)	LCOR (ENSPMJG00000004409)	PPRC1 (ENSPMJG00000004431) #14	LDB1 (ENSPMJG00000004435) #15	ENSPMJG00000004456	HPS6 (ENSPMJG00000004470) #16	ARMH3 (ENSPMJG00000004471) #17	KCNIP2 (ENSPMJG00000004479) #18	ENSPMJG00000004497	OGA (ENSPMJG00000004530) #19	NPM3 (ENSPMJG00000004562) #20	FGF8 (ENSPMJG00000004565) #21	FBXW4 (ENSPMJG00000004570) #22	DPCD (ENSPMJG00000004583) #23	POLL (ENSPMJG00000004590) #24	ENSPMJG00000004603	BTRC (ENSPMJG00000004640) #25	LBX1 (ENSPMJG00000004661) #27	TLX1 (ENSPMJG00000004663) #28	KAZALD1 (ENSPMJG00000004666) #29	SFXN3 (ENSPMJG00000004671) #30	PDZD7 (ENSPMJG00000004677) #32	LZTS2 (ENSPMJG00000004695) #33	TWNK (ENSPMJG00000004696) #34	MRPL43 (ENSPMJG00000004697) #35	SEMA4G (ENSPMJG00000004711) #36	SLF2 (ENSPMJG00000004736) #37	MFSD13A (ENSPMJG00000004758)
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000160317
Zebra finch	MODERN SPECIES	28	EXOSC1 (ENSTGUG00000009692)	ENSTGUG00000021202	RRP12 (ENSTGUG00000009711)	ARHGAP19 (ENSTGUG00000009730)	SLIT1 (ENSTGUG00000009734)	LCOR (ENSTGUG00000009834)	PPRC1 (ENSTGUG00000009839) #14	LDB1 (ENSTGUG00000009855) #15	ENSTGUG00000009862	HPS6 (ENSTGUG00000009875) #16	ARMH3 (ENSTGUG00000009880) #17	KCNIP2 (ENSTGUG00000009911) #18	OGA (ENSTGUG00000009938) #19	NPM3 (ENSTGUG00000009948) #20	FGF8 (ENSTGUG00000009956) #21	FBXW4 (ENSTGUG00000009903) #22	DPCD (ENSTGUG00000009967) #23	POLL (ENSTGUG00000009972) #24	ENSTGUG00000009983	BTRC (ENSTGUG00000010007) #25	LBX1 (ENSTGUG00000010027) #27	TLX1 (ENSTGUG00000010029) #28	ENSTGUG00000027136	KAZALD1 (ENSTGUG00000010037) #29	SFXN3 (ENSTGUG00000010039) #30	PDZD7 (ENSTGUG00000010061) #32	LZTS2 (ENSTGUG00000029397) #33	TWNK (ENSTGUG00000010066) #34	ENSTGUG00000010071 #35	SEMA4G (ENSTGUG00000010077) #36	SLF2 (ENSTGUG00000010094) #37
Common canary	MODERN SPECIES	7	EXOSC1 (ENSSCAG00000016610)	ENSSCAG00000016605	RRP12 (ENSSCAG00000016597)	ARHGAP19 (ENSSCAG00000016588)	SLIT1 (ENSSCAG00000016584)	ENSSCAG00000016580	ENSSCAG00000016579	ENSSCAG00000016575 #14	LDB1 (ENSSCAG00000016573) #15	HPS6 (ENSSCAG00000016571) #16	ARMH3 (ENSSCAG00000016565) #17	KCNIP2 (ENSSCAG00000016561) #18	OGA (ENSSCAG00000016559) #19	NPM3 (ENSSCAG00000016557) #20	FGF8 (ENSSCAG00000016555) #21	FBXW4 (ENSSCAG00000016551) #22	DPCD (ENSSCAG00000016547) #23	POLL (ENSSCAG00000016546) #24	ENSSCAG00000016545	BTRC (ENSSCAG00000016542) #25	TLX1 (ENSSCAG00000016539) #28	KAZALD1 (ENSSCAG00000016538) #29	SFXN3 (ENSSCAG00000016535) #30	ENSSCAG00000016532	ENSSCAG00000016531	PDZD7 (ENSSCAG00000016529) #32	TWNK (ENSSCAG00000016528) #34	MRPL43 (ENSSCAG00000016527) #35	SEMA4G (ENSSCAG00000016526) #36	SLF2 (ENSSCAG00000016525) #37	MFSD13A (ENSSCAG00000016523)
Medium ground finch	MODERN SPECIES	3	ZDHHC16 (ENSGFOG00000007902)	EXOSC1 (ENSGFOG00000007885)	ENSGFOG00000007868	RRP12 (ENSGFOG00000007841)	ARHGAP19 (ENSGFOG00000007827)	SLIT1 (ENSGFOG00000004119)	LCOR (ENSGFOG00000004029)	ENSGFOG00000004024	ENSGFOG00000004011 #14	LDB1 (ENSGFOG00000003999) #15	ARMH3 (ENSGFOG00000003948) #17	KCNIP2 (ENSGFOG00000003914) #18	OGA (ENSGFOG00000003883) #19	NPM3 (ENSGFOG00000003871) #20	FGF8 (ENSGFOG00000003860) #21	FBXW4 (ENSGFOG00000003718) #22	DPCD (ENSGFOG00000003687) #23	POLL (ENSGFOG00000003670) #24	ENSGFOG00000003629	ENSGFOG00000003604	ENSGFOG00000003597	BTRC (ENSGFOG00000003584) #25	KAZALD1 (ENSGFOG00000003573) #29	SFXN3 (ENSGFOG00000003555) #30	ENSGFOG00000003538	ENSGFOG00000003506 #32	ENSGFOG00000003498 #32	TWNK (ENSGFOG00000003482) #34	SEMA4G (ENSGFOG00000003465) #36	ENSGFOG00000003429 #37	MFSD13A (ENSGFOG00000003413)
Flycatcher	MODERN SPECIES	25	EXOSC1 (ENSFALG00000008450)	ENSFALG00000008454	RRP12 (ENSFALG00000008458)	ARHGAP19 (ENSFALG00000008462)	SLIT1 (ENSFALG00000008472)	LCOR (ENSFALG00000025098)	LDB1 (ENSFALG00000008498) #15	PPRC1 (ENSFALG00000008489) #14	ENSFALG00000008528	HPS6 (ENSFALG00000022918) #16	ARMH3 (ENSFALG00000008569) #17	KCNIP2 (ENSFALG00000008575) #18	OGA (ENSFALG00000008580) #19	NPM3 (ENSFALG00000008586) #20	FGF8 (ENSFALG00000024705) #21	FBXW4 (ENSFALG00000008613) #22	DPCD (ENSFALG00000008617) #23	POLL (ENSFALG00000008619) #24	ENSFALG00000008634	BTRC (ENSFALG00000008656) #25	TLX1 (ENSFALG00000008660) #28	KAZALD1 (ENSFALG00000008666) #29	SFXN3 (ENSFALG00000008668) #30	PDZD7 (ENSFALG00000008671) #32	ENSFALG00000028985	LZTS2 (ENSFALG00000008676) #33	TWNK (ENSFALG00000008680) #34	MRPL43 (ENSFALG00000023885) #35	SEMA4G (ENSFALG00000008684) #36	ENSFALG00000008686 #37	MFSD13A (ENSFALG00000008689)
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00390000015287	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798.d #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000160317
Kakapo	MODERN SPECIES	22	ZDHHC16 (ENSSHBG00005020956)	EXOSC1 (ENSSHBG00005020963)	ENSSHBG00005020970	RRP12 (ENSSHBG00005020977)	ARHGAP19 (ENSSHBG00005020983)	SLIT1 (ENSSHBG00005021002)	LCOR (ENSSHBG00005001762)	PPRC1 (ENSSHBG00005001811) #14	LDB1 (ENSSHBG00005001841) #15	HPS6 (ENSSHBG00005001864) #16	ARMH3 (ENSSHBG00005001905) #17	ENSSHBG00005001961 #18	OGA (ENSSHBG00005001995) #19	NPM3 (ENSSHBG00005002019) #20	FGF8 (ENSSHBG00005002055) #21	FBXW4 (ENSSHBG00005002093) #22	DPCD (ENSSHBG00005002126) #23	POLL (ENSSHBG00005002157) #24	ENSSHBG00005002316	BTRC (ENSSHBG00005002701) #25	LBX1 (ENSSHBG00005002802) #27	TLX1 (ENSSHBG00005002828) #28	KAZALD1 (ENSSHBG00005002844) #29	SFXN3 (ENSSHBG00005002866) #30	PDZD7 (ENSSHBG00005002896) #32	LZTS2 (ENSSHBG00005002935) #33	TWNK (ENSSHBG00005002956) #34	MRPL43 (ENSSHBG00005002979) #35	SEMA4G (ENSSHBG00005003005) #36	SLF2 (ENSSHBG00005003064) #37	MFSD13A (ENSSHBG00005003113)
Golden eagle	MODERN SPECIES	2	EXOSC1 (ENSACCG00020000443)	ENSACCG00020010002	RRP12 (ENSACCG00020009977)	ARHGAP19 (ENSACCG00020009952)	SLIT1 (ENSACCG00020009931)	LCOR (ENSACCG00020009912)	ENSACCG00020009903	PPRC1 (ENSACCG00020009873) #14	LDB1 (ENSACCG00020009835) #15	HPS6 (ENSACCG00020009815) #16	ARMH3 (ENSACCG00020009789) #17	KCNIP2 (ENSACCG00020009741) #18	OGA (ENSACCG00020009722) #19	NPM3 (ENSACCG00020009702) #20	FGF8 (ENSACCG00020009686) #21	FBXW4 (ENSACCG00020009662) #22	DPCD (ENSACCG00020009630) #23	POLL (ENSACCG00020009601) #24	ENSACCG00020009569	BTRC (ENSACCG00020009499) #25	LBX1 (ENSACCG00020009419) #27	TLX1 (ENSACCG00020009411) #28	KAZALD1 (ENSACCG00020009402) #29	SFXN3 (ENSACCG00020009385) #30	PDZD7 (ENSACCG00020009355) #32	LZTS2 (ENSACCG00020009312) #33	TWNK (ENSACCG00020009294) #34	MRPL43 (ENSACCG00020009283) #35	SEMA4G (ENSACCG00020009255) #36	SLF2 (ENSACCG00020009231) #37	ENSACCG00020009209
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT01030000235534	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698.n #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT01030000235534	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Japanese quail	MODERN SPECIES	24	EXOSC1 (ENSCJPG00005019603)	ENSCJPG00005019616	ARHGAP19 (ENSCJPG00005019619)	SLIT1 (ENSCJPG00005019620)	LCOR (ENSCJPG00005019736)	ENSCJPG00005019737	ENSCJPG00005019738	ENSCJPG00005019739 #14	LDB1 (ENSCJPG00005019740) #15	HPS6 (ENSCJPG00005019741) #16	ARMH3 (ENSCJPG00005019742) #17	KCNIP2 (ENSCJPG00005019751) #18	OGA (ENSCJPG00005019752) #19	NPM3 (ENSCJPG00005019854) #20	FGF8 (ENSCJPG00005019855) #21	FBXW4 (ENSCJPG00005019856) #22	DPCD (ENSCJPG00005019857) #23	ENSCJPG00005019858 #24	ENSCJPG00005019859 #24	ENSCJPG00005019860	BTRC (ENSCJPG00005019877) #25	ENSCJPG00005019967	LBX1 (ENSCJPG00005019968) #27	TLX1 (ENSCJPG00005019970) #28	KAZALD1 (ENSCJPG00005019972) #29	SFXN3 (ENSCJPG00005019973) #30	PDZD7 (ENSCJPG00005019974) #32	ENSCJPG00005019975	LZTS2 (ENSCJPG00005019976) #33	TWNK (ENSCJPG00005019977) #34	MRPL43 (ENSCJPG00005019978) #35
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00390000015287	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698.n #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT01030000235534	ENSGT01040000244551	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36
Chicken	MODERN SPECIES	35	EXOSC1 (ENSGALG00010020705)	PGAM1 (ENSGALG00010020714)	RRP12 (ENSGALG00010020730)	ARHGAP19 (ENSGALG00010020759)	SLIT1 (ENSGALG00010020778)	LCOR (ENSGALG00010020866)	PPRC1 (ENSGALG00010020889) #14	LDB1 (ENSGALG00010020921) #15	ENSGALG00010020941	HPS6 (ENSGALG00010020949) #16	C6H10orf76 (ENSGALG00010020970) #17	KCNIP2 (ENSGALG00010021012) #18	MGEA5 (ENSGALG00010021023) #19	NPM3 (ENSGALG00010021034) #20	FGF8 (ENSGALG00010021040) #21	FBXW4 (ENSGALG00010023185) #22	DPCD (ENSGALG00010019139) #23	POLL (ENSGALG00010019104) #24	ENSGALG00010017997	BTRC (ENSGALG00010018103) #25	LBX1 (ENSGALG00010019045) #27	TLX1 (ENSGALG00010018467) #28	KAZALD1 (ENSGALG00010017786) #29	SFXN3 (ENSGALG00010017949) #30	PDZD7 (ENSGALG00010017959) #32	ENSGALG00010017964	LZTS2 (ENSGALG00010023177) #33	C10orf2 (ENSGALG00010018482) #34	ENSGALG00010018510 #35	SEMA4G (ENSGALG00010018515) #36	ENSGALG00010018526 #37
Turkey	MODERN SPECIES	28	EXOSC1 (ENSMGAG00000018256)	ENSMGAG00000009817	RRP12 (ENSMGAG00000009829)	ARHGAP19 (ENSMGAG00000009856)	SLIT1 (ENSMGAG00000009859)	LCOR (ENSMGAG00000009950)	PPRC1 (ENSMGAG00000010023) #14	LDB1 (ENSMGAG00000009961) #15	ENSMGAG00000002659	HPS6 (ENSMGAG00000002655) #16	ARMH3 (ENSMGAG00000009992) #17	KCNIP2 (ENSMGAG00000010045) #18	OGA (ENSMGAG00000010077) #19	NPM3 (ENSMGAG00000019749) #20	FGF8 (ENSMGAG00000015335) #21	FBXW4 (ENSMGAG00000010100) #22	DPCD (ENSMGAG00000010112) #23	POLL (ENSMGAG00000010132) #24	ENSMGAG00000010147	BTRC (ENSMGAG00000010164) #25	ENSMGAG00000018253 #28	KAZALD1 (ENSMGAG00000010203) #29	SFXN3 (ENSMGAG00000022982) #30	PDZD7 (ENSMGAG00000010230) #32	ENSMGAG00000021897	ENSMGAG00000018739 ##32	LZTS2 (ENSMGAG00000010236) #33	TWNK (ENSMGAG00000010237) #34	SEMA4G (ENSMGAG00000010240) #36	SLF2 (ENSMGAG00000010255) #37	MFSD13A (ENSMGAG00000010269)
Anatidae	ANCESTRAL SPECIES	4	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00980000202932	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000160317
Pink-footed goose	MODERN SPECIES	11	EXOSC1 (ENSABRG00000008001)	ENSABRG00000007994	RRP12 (ENSABRG00000007978)	ARHGAP19 (ENSABRG00000007950)	ENSABRG00000007944	SLIT1 (ENSABRG00000007893)	LCOR (ENSABRG00000007875)	PPRC1 (ENSABRG00000007859) #14	LDB1 (ENSABRG00000007841) #15	ENSABRG00000007812	ARMH3 (ENSABRG00000007775) #17	KCNIP2 (ENSABRG00000007767) #18	OGA (ENSABRG00000007745) #19	NPM3 (ENSABRG00000007714) #20	FGF8 (ENSABRG00000007708) #21	FBXW4 (ENSABRG00000007699) #22	DPCD (ENSABRG00000007691) #23	POLL (ENSABRG00000007682) #24	ENSABRG00000007659	BTRC (ENSABRG00000007647) #25	TLX1 (ENSABRG00000007623) #28	ENSABRG00000007618	KAZALD1 (ENSABRG00000007609) #29	SFXN3 (ENSABRG00000007596) #30	PDZD7 (ENSABRG00000007581) #32	LZTS2 (ENSABRG00000007569) #33	TWNK (ENSABRG00000007559) #34	ENSABRG00000007555	SEMA4G (ENSABRG00000007538) #36	SLF2 (ENSABRG00000007530) #37	MFSD13A (ENSABRG00000007521)
African ostrich	MODERN SPECIES	290	MMS19 (ENSSCUG00000001785)	ZDHHC16 (ENSSCUG00000001868)	EXOSC1 (ENSSCUG00000001873)	ENSSCUG00000001876	RRP12 (ENSSCUG00000001878)	ARHGAP19 (ENSSCUG00000001882)	LCOR (ENSSCUG00000001884)	ENSSCUG00000001887	LDB1 (ENSSCUG00000001889) #15	HPS6 (ENSSCUG00000001892) #16	ARMH3 (ENSSCUG00000001895) #17	KCNIP2 (ENSSCUG00000001896) #18	OGA (ENSSCUG00000001899) #19	NPM3 (ENSSCUG00000001900) #20	FGF8 (ENSSCUG00000001901) #21	FBXW4 (ENSSCUG00000001902) #22	DPCD (ENSSCUG00000001903) #23	POLL (ENSSCUG00000001904) #24	ENSSCUG00000001906	BTRC (ENSSCUG00000001914) #25	ENSSCUG00000001920	KAZALD1 (ENSSCUG00000001922) #29	SFXN3 (ENSSCUG00000001926) #30	ENSSCUG00000001933 #32	ENSSCUG00000001937	ENSSCUG00000001940 #32	ENSSCUG00000001945 #34	ENSSCUG00000001949	SLF2 (ENSSCUG00000001954) #37	MFSD13A (ENSSCUG00000001958)	ACTR1A (ENSSCUG00000001959)
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	68	EXOSC1 (ENSCPRG00005013566)	ZDHHC16 (ENSCPRG00005013550)	ENSCPRG00005013535	ENSCPRG00005013313	ARHGAP19 (ENSCPRG00005013266)	SLIT1 (ENSCPRG00005013244)	LCOR (ENSCPRG00005013234)	PPRC1 (ENSCPRG00005013227) #14	LDB1 (ENSCPRG00005013215) #15	HPS6 (ENSCPRG00005013211) #16	ARMH3 (ENSCPRG00005013194) #17	KCNIP2 (ENSCPRG00005013176) #18	OGA (ENSCPRG00005013170) #19	NPM3 (ENSCPRG00005013161) #20	FGF8 (ENSCPRG00005013159) #21	ENSCPRG00005013157 #22	ENSCPRG00005013155 #22	DPCD (ENSCPRG00005013153) #23	POLL (ENSCPRG00005013150) #24	ENSCPRG00005013130	BTRC (ENSCPRG00005013112) #25	ENSCPRG00005013103	LBX1 (ENSCPRG00005013102) #27	TLX1 (ENSCPRG00005013094) #28	KAZALD1 (ENSCPRG00005013088) #29	SFXN3 (ENSCPRG00005013022) #30	PDZD7 (ENSCPRG00005013012) #32	ENSCPRG00005013009 #33	TWNK (ENSCPRG00005013007) #34	MRPL43 (ENSCPRG00005012999) #35	SEMA4G (ENSCPRG00005012989) #36
Australian saltwater crocodile	MODERN SPECIES	68	ZDHHC16 (ENSCPRG00005013550)	ENSCPRG00005013535	ENSCPRG00005013313	ARHGAP19 (ENSCPRG00005013266)	SLIT1 (ENSCPRG00005013244)	LCOR (ENSCPRG00005013234)	PPRC1 (ENSCPRG00005013227) #14	LDB1 (ENSCPRG00005013215) #15	HPS6 (ENSCPRG00005013211) #16	ARMH3 (ENSCPRG00005013194) #17	KCNIP2 (ENSCPRG00005013176) #18	OGA (ENSCPRG00005013170) #19	NPM3 (ENSCPRG00005013161) #20	FGF8 (ENSCPRG00005013159) #21	ENSCPRG00005013157 #22	ENSCPRG00005013155 #22	DPCD (ENSCPRG00005013153) #23	POLL (ENSCPRG00005013150) #24	ENSCPRG00005013130	BTRC (ENSCPRG00005013112) #25	ENSCPRG00005013103	LBX1 (ENSCPRG00005013102) #27	TLX1 (ENSCPRG00005013094) #28	KAZALD1 (ENSCPRG00005013088) #29	SFXN3 (ENSCPRG00005013022) #30	PDZD7 (ENSCPRG00005013012) #32	ENSCPRG00005013009 #33	TWNK (ENSCPRG00005013007) #34	MRPL43 (ENSCPRG00005012999) #35	SEMA4G (ENSCPRG00005012989) #36	SLF2 (ENSCPRG00005012984) #37
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000013106	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00390000015287	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00990000203892	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Goode s thornscrub tortoise	MODERN SPECIES	21	ENSGEVG00005003749	UBTD1 (ENSGEVG00005003758)	ENSGEVG00005003767	ARHGAP19 (ENSGEVG00005003823)	SLIT1 (ENSGEVG00005003855)	LCOR (ENSGEVG00005003931)	ENSGEVG00005003952	ENSGEVG00005003965 #14	LDB1 (ENSGEVG00005003974) #15	HPS6 (ENSGEVG00005003987) #16	ARMH3 (ENSGEVG00005003998) #17	KCNIP2 (ENSGEVG00005004222) #18	OGA (ENSGEVG00005004411) #19	NPM3 (ENSGEVG00005004443) #20	FGF8 (ENSGEVG00005004467) #21	FBXW4 (ENSGEVG00005004522) #22	DPCD (ENSGEVG00005004549) #23	POLL (ENSGEVG00005004570) #24	ENSGEVG00005004603	BTRC (ENSGEVG00005004649) #25	ENSGEVG00005004693	LBX1 (ENSGEVG00005004717) #27	TLX1 (ENSGEVG00005004739) #28	ENSGEVG00005004760	KAZALD1 (ENSGEVG00005004786) #29	SFXN3 (ENSGEVG00005004813) #30	ENSGEVG00005004858	PDZD7 (ENSGEVG00005004930) #32	ENSGEVG00005005016	LZTS2 (ENSGEVG00005005030) #33	TWNK (ENSGEVG00005005053) #34
Abingdon island giant tortoise	MODERN SPECIES	1912										KCNIP2 (ENSCABG00000002327) #18	ENSCABG00000002340	OGA (ENSCABG00000002352) #19	NPM3 (ENSCABG00000002436) #20	ENSCABG00000002439	FGF8 (ENSCABG00000002441) #21	FBXW4 (ENSCABG00000002445) #22	DPCD (ENSCABG00000002448) #23	ENSCABG00000002449 #24	ENSCABG00000002450 #24	ENSCABG00000002455	BTRC (ENSCABG00000003380) #25	LBX1 (ENSCABG00000004283) #27	TLX1 (ENSCABG00000004286) #28	KAZALD1 (ENSCABG00000004291) #29	SFXN3 (ENSCABG00000004306) #30	ENSCABG00000004310	ENSCABG00000004313 #32	ENSCABG00000004314 #32	LZTS2 (ENSCABG00000004316) #33	TWNK (ENSCABG00000004320) #34	MRPL43 (ENSCABG00000004324) #35
Emydidae	ANCESTRAL SPECIES	6	ENSGT00390000013106	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37	ENSGT00940000160317
Three-toed box turtle	MODERN SPECIES	39	AVPI1 (ENSTMTG00000001017)	PI4K2A (ENSTMTG00000001025)	ENSTMTG00000001035	MMS19 (ENSTMTG00000001309)	ZDHHC16 (ENSTMTG00000002566)	ARHGAP19 (ENSTMTG00000002583)	ENSTMTG00000002590	LCOR (ENSTMTG00000002602)	PPRC1 (ENSTMTG00000002608) #14	LDB1 (ENSTMTG00000002621) #15	HPS6 (ENSTMTG00000002625) #16	ARMH3 (ENSTMTG00000002641) #17	OGA (ENSTMTG00000002679) #19	NPM3 (ENSTMTG00000002688) #20	FGF8 (ENSTMTG00000002693) #21	FBXW4 (ENSTMTG00000002700) #22	DPCD (ENSTMTG00000002704) #23	POLL (ENSTMTG00000002707) #24	ENSTMTG00000002734	BTRC (ENSTMTG00000002831) #25	LBX1 (ENSTMTG00000002859) #27	TLX1 (ENSTMTG00000002865) #28	KAZALD1 (ENSTMTG00000002879) #29	SFXN3 (ENSTMTG00000002927) #30	PDZD7 (ENSTMTG00000002937) #32	ENSTMTG00000002944 ##32	LZTS2 (ENSTMTG00000002949) #33	TWNK (ENSTMTG00000002956) #34	MRPL43 (ENSTMTG00000002961) #35	SEMA4G (ENSTMTG00000002965) #36	SLF2 (ENSTMTG00000002972) #37
painted turtle	MODERN SPECIES	2388	RRP12 (ENSCPBG00000011935)	ENSCPBG00000011932	ARHGAP19 (ENSCPBG00000011924)	SLIT1 (ENSCPBG00000005963)	LCOR (ENSCPBG00000005416)	ENSCPBG00000005413	PPRC1 (ENSCPBG00000005408) #14	LDB1 (ENSCPBG00000005401) #15	ENSCPBG00000005394	HPS6 (ENSCPBG00000005375) #16	ARMH3 (ENSCPBG00000003975) #17	KCNIP2 (ENSCPBG00000003838) #18	OGA (ENSCPBG00000003826) #19	NPM3 (ENSCPBG00000003817) #20	FGF8 (ENSCPBG00000003804) #21	FBXW4 (ENSCPBG00000003783) #22	DPCD (ENSCPBG00000003764) #23	POLL (ENSCPBG00000003750) #24	ENSCPBG00000003715	BTRC (ENSCPBG00000003583) #25	LBX1 (ENSCPBG00000003542) #27	TLX1 (ENSCPBG00000003532) #28	KAZALD1 (ENSCPBG00000003520) #29	SFXN3 (ENSCPBG00000003501) #30	ENSCPBG00000003492	ENSCPBG00000003469 #32	ENSCPBG00000003450 #32	LZTS2 (ENSCPBG00000003427) #33	TWNK (ENSCPBG00000003411) #34	MRPL43 (ENSCPBG00000003402) #35	SEMA4G (ENSCPBG00000003347) #36
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Laterata	ANCESTRAL SPECIES		ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Common wall lizard	MODERN SPECIES	13	RRP12 (ENSPMRG00000002801)	ARHGAP19 (ENSPMRG00000002746)	SLIT1 (ENSPMRG00000001494)	LCOR (ENSPMRG00000001039)	ENSPMRG00000001008	ENSPMRG00000000986	PPRC1 (ENSPMRG00000000943) #14	LDB1 (ENSPMRG00000000892) #15	HPS6 (ENSPMRG00000000861) #16	ARMH3 (ENSPMRG00000000804) #17	KCNIP2 (ENSPMRG00000000777) #18	OGA (ENSPMRG00000000747) #19	NPM3 (ENSPMRG00000000732) #20	FGF8 (ENSPMRG00000000710) #21	ENSPMRG00000000700	FBXW4 (ENSPMRG00000000682) #22	DPCD (ENSPMRG00000000665) #23	POLL (ENSPMRG00000000637) #24	ENSPMRG00000000604	BTRC (ENSPMRG00000000447) #25	LBX1 (ENSPMRG00000000334) #27	TLX1 (ENSPMRG00000000309) #28	KAZALD1 (ENSPMRG00000000257) #29	SFXN3 (ENSPMRG00000000222) #30	ENSPMRG00000004326	ENSPMRG00000004320	PDZD7 (ENSPMRG00000004305) #32	LZTS2 (ENSPMRG00000004294) #33	TWNK (ENSPMRG00000004276) #34	ENSPMRG00000004260	SEMA4G (ENSPMRG00000004128) #36
Argentine black and white tegu	MODERN SPECIES	19	ENSSMRG00000021680	RRP12 (ENSSMRG00000021679)	ARHGAP19 (ENSSMRG00000021678)	SLIT1 (ENSSMRG00000021677)	LCOR (ENSSMRG00000021676)	ENSSMRG00000021675	PPRC1 (ENSSMRG00000021674) #14	LDB1 (ENSSMRG00000021673) #15	ENSSMRG00000021672	HPS6 (ENSSMRG00000021671) #16	ARMH3 (ENSSMRG00000021670) #17	KCNIP2 (ENSSMRG00000021669) #18	OGA (ENSSMRG00000021668) #19	NPM3 (ENSSMRG00000021667) #20	FGF8 (ENSSMRG00000021666) #21	FBXW4 (ENSSMRG00000021665) #22	DPCD (ENSSMRG00000021664) #23	POLL (ENSSMRG00000021663) #24
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00530000063586.a	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Indian cobra	MODERN SPECIES	3	EXOSC1 (ENSNNAG00000003048)	ENSNNAG00000003029	RRP12 (ENSNNAG00000016135)	ARHGAP19 (ENSNNAG00000016110)	SLIT1 (ENSNNAG00000016033)	LCOR (ENSNNAG00000016005)	PPRC1 (ENSNNAG00000015952) #14	LDB1 (ENSNNAG00000015901) #15	ENSNNAG00000015868	HPS6 (ENSNNAG00000015864) #16	ARMH3 (ENSNNAG00000015743) #17	KCNIP2 (ENSNNAG00000015571) #18	OGA (ENSNNAG00000015525) #19	NPM3 (ENSNNAG00000015516) #20	FGF8 (ENSNNAG00000015504) #21	FBXW4 (ENSNNAG00000015475) #22	DPCD (ENSNNAG00000015439) #23	POLL (ENSNNAG00000015413) #24	ENSNNAG00000015358	BTRC (ENSNNAG00000015268) #25	LBX1 (ENSNNAG00000015245) #27	TLX1 (ENSNNAG00000015238) #28	KAZALD1 (ENSNNAG00000015218) #29	SFXN3 (ENSNNAG00000015203) #30	ENSNNAG00000015152	ENSNNAG00000015138	PDZD7 (ENSNNAG00000015107) #32	LZTS2 (ENSNNAG00000015090) #33	TWNK (ENSNNAG00000015073) #34	ENSNNAG00000015050	SEMA4G (ENSNNAG00000015031) #36
Elapidae_a	ANCESTRAL SPECIES		ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Blue-lipped sea krait	MODERN SPECIES	5515																FBXW4 (ENSLLTG00000016919) #22	DPCD (ENSLLTG00000016918) #23	POLL (ENSLLTG00000016917) #24	ENSLLTG00000016911	BTRC (ENSLLTG00000015936) #25
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00950000182926.b.d	ENSGT00390000013106	ENSGT00940000157331	ENSGT00940000157322.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00950000183137.a #14	ENSGT00390000005639.a.b #15	ENSGT00390000001546 #16	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000164095	ENSGT00940000159672 #25	ENSGT00940000161756 #27	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT01030000235534	ENSGT00950000183002.C #32	ENSGT00940000154078.a.a #33	ENSGT00390000004495 #34	ENSGT00390000015375 #35	ENSGT00940000157186 #36	ENSGT00530000064017.a #37
Eastern brown snake	MODERN SPECIES	16	EXOSC1 (ENSPTXG00000018445)	ENSPTXG00000018444	RRP12 (ENSPTXG00000018443)	ENSPTXG00000018441	SLIT1 (ENSPTXG00000018436)	LCOR (ENSPTXG00000018435)	ENSPTXG00000018434	PPRC1 (ENSPTXG00000018433) #14	LDB1 (ENSPTXG00000018432) #15	HPS6 (ENSPTXG00000018431) #16	ARMH3 (ENSPTXG00000018430) #17	KCNIP2 (ENSPTXG00000018423) #18	OGA (ENSPTXG00000018422) #19	NPM3 (ENSPTXG00000018421) #20	FGF8 (ENSPTXG00000018420) #21	FBXW4 (ENSPTXG00000018418) #22	DPCD (ENSPTXG00000018417) #23	POLL (ENSPTXG00000018416) #24	ENSPTXG00000018397	BTRC (ENSPTXG00000018395) #25	LBX1 (ENSPTXG00000018393) #27	TLX1 (ENSPTXG00000018391) #28
Mainland tiger snake	MODERN SPECIES		SLIT1 (ENSNSUG00000007046)	LCOR (ENSNSUG00000007045)	ENSNSUG00000007044	ENSNSUG00000007043	ENSNSUG00000007041 #14	LDB1 (ENSNSUG00000007029) #15	HPS6 (ENSNSUG00000007027) #16	ENSNSUG00000007026 #17	ENSNSUG00000007025	ENSNSUG00000007024 #17	ENSNSUG00000006959	KCNIP2 (ENSNSUG00000006925) #18	OGA (ENSNSUG00000006678) #19	NPM3 (ENSNSUG00000006677) #20	FGF8 (ENSNSUG00000006675) #21	FBXW4 (ENSNSUG00000006672) #22	DPCD (ENSNSUG00000006670) #23	ENSNSUG00000006669 #24	ENSNSUG00000006668 #24	ENSNSUG00000006614	BTRC (ENSNSUG00000006609) #25	LBX1 (ENSNSUG00000006607) #27	TLX1 (ENSNSUG00000006606) #28	KAZALD1 (ENSNSUG00000006604) #29	SFXN3 (ENSNSUG00000006595) #30	ENSNSUG00000006593	PDZD7 (ENSNSUG00000006588) #32	LZTS2 (ENSNSUG00000006586) #33	TWNK (ENSNSUG00000006583) #34	MRPL43 (ENSNSUG00000006581) #35	SEMA4G (ENSNSUG00000006578) #36
Lizard	MODERN SPECIES	853				ENSACAG00000043329	ENSACAG00000012444	ENSACAG00000021055	PPRC1 (ENSACAG00000012404) #14	LDB1 (ENSACAG00000012317) #15	ENSACAG00000023496	HPS6 (ENSACAG00000012311) #16	ARMH3 (ENSACAG00000012211) #17	KCNIP2 (ENSACAG00000012032) #18	OGA (ENSACAG00000011944) #19	NPM3 (ENSACAG00000011936) #20	FGF8 (ENSACAG00000011928) #21	FBXW4 (ENSACAG00000011888) #22	DPCD (ENSACAG00000029359) #23	POLL (ENSACAG00000011850) #24	ENSACAG00000011539	BTRC (ENSACAG00000011203) #25	LBX1 (ENSACAG00000022501) #27	TLX1 (ENSACAG00000011182) #28	KAZALD1 (ENSACAG00000011169) #29	SFXN3 (ENSACAG00000029026) #30	ENSACAG00000011135	PDZD7 (ENSACAG00000011099) #32	LZTS2 (ENSACAG00000011076) #33
tuatara	MODERN SPECIES	1056	ENSSPUG00000012251	RRP12 (ENSSPUG00000012221)	ARHGAP19 (ENSSPUG00000012197)	SLIT1 (ENSSPUG00000012148)	ENSSPUG00000012129	ENSSPUG00000012101	ENSSPUG00000012079 #14	ENSSPUG00000012068 #14	LDB1 (ENSSPUG00000012060) #15	ENSSPUG00000012022	ARMH3 (ENSSPUG00000011969) #17	KCNIP2 (ENSSPUG00000011942) #18	OGA (ENSSPUG00000011899) #19	NPM3 (ENSSPUG00000011875) #20	FGF8 (ENSSPUG00000011861) #21	FBXW4 (ENSSPUG00000011804) #22	DPCD (ENSSPUG00000011780) #23	POLL (ENSSPUG00000011763) #24	ENSSPUG00000011646	BTRC (ENSSPUG00000011559) #25	LBX1 (ENSSPUG00000011521) #27	TLX1 (ENSSPUG00000011511) #28	KAZALD1 (ENSSPUG00000011500) #29	SFXN3 (ENSSPUG00000011489) #30	ENSSPUG00000011481	ENSSPUG00000011397 #32	ENSSPUG00000011356 #32	LZTS2 (ENSSPUG00000011340) #33	TWNK (ENSSPUG00000011329) #34	MRPL43 (ENSSPUG00000011319) #35	SEMA4G (ENSSPUG00000011303) #36