Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Theria	ANCESTRAL SPECIES	26	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.a.a ##12	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Primates	ANCESTRAL SPECIES	16	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.a.b ##12	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.a.b ##12	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796.g.b ##20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796.g.b ##20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Marmoset	MODERN SPECIES	3	NFKB2 (ENSCJAG00000017928) #7	GBF1 (ENSCJAG00000017861) #8	PITX3 (ENSCJAG00000017858) #9	ELOVL3 (ENSCJAG00000079228) #10	ENSCJAG00000082055 #11	NOLC1 (ENSCJAG00000017832) #12	PPRC1 (ENSCJAG00000017812) #13	LDB1 (ENSCJAG00000017777) #14	HPS6 (ENSCJAG00000022973) #15	ENSCJAG00000056816 #16	ARMH3 (ENSCJAG00000017743) #17	KCNIP2 (ENSCJAG00000017676) #18	OGA (ENSCJAG00000017657) #19	NPM3 (ENSCJAG00000017650) #20	FGF8 (ENSCJAG00000084172) #21	FBXW4 (ENSCJAG00000017627) #22	DPCD (ENSCJAG00000017614) #23	POLL (ENSCJAG00000017600) #24	BTRC (ENSCJAG00000017573) #25	LBX1 (ENSCJAG00000017569) #26	ENSCJAG00000087194 #27	TLX1 (ENSCJAG00000017563) #28	KAZALD1 (ENSCJAG00000017554) #29	SFXN3 (ENSCJAG00000017527) #30	PDZD7 (ENSCJAG00000017518) #31	LZTS2 (ENSCJAG00000041968) #32	ENSCJAG00000078679 #33	ENSCJAG00000017487 #34	ENSCJAG00000062174 #35	ENSCJAG00000017480 #36	SEMA4G (ENSCJAG00000070347) #37
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000002554 #17	ENSGT00390000005532.e.b.e	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796.g.b ##20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Capuchin	MODERN SPECIES	71	PSD (ENSCCAG00000018781)	NFKB2 (ENSCCAG00000036762) #7	GBF1 (ENSCCAG00000035570) #8	PITX3 (ENSCCAG00000024206) #9	ELOVL3 (ENSCCAG00000030858) #10	NOLC1 (ENSCCAG00000031293) #12	PPRC1 (ENSCCAG00000014910) #13	LDB1 (ENSCCAG00000032351) #14	ENSCCAG00000019492	ARMH3 (ENSCCAG00000030229) #17	ENSCCAG00000021166	KCNIP2 (ENSCCAG00000020733) #18	OGA (ENSCCAG00000035955) #19	ENSCCAG00000031043 ##20	FGF8 (ENSCCAG00000028398) #21	FBXW4 (ENSCCAG00000015377) #22	DPCD (ENSCCAG00000031078) #23	POLL (ENSCCAG00000021549) #24	BTRC (ENSCCAG00000028586) #25	TYROBP (ENSCCAG00000030200)	LBX1 (ENSCCAG00000027225) #26	ENSCCAG00000018927	TLX1 (ENSCCAG00000022529) #28	KAZALD1 (ENSCCAG00000025698) #29	SFXN3 (ENSCCAG00000027543) #30	PDZD7 (ENSCCAG00000027027) #31	ENSCCAG00000031185	LZTS2 (ENSCCAG00000028122) #32	TWNK (ENSCCAG00000022331) #33	MRPL43 (ENSCCAG00000027213) #35	SEMA4G (ENSCCAG00000036740) #37
Bolivian squirrel monkey	MODERN SPECIES	47	PSD (ENSSBOG00000025518)	NFKB2 (ENSSBOG00000027266) #7	GBF1 (ENSSBOG00000021062) #8	ENSSBOG00000016252 #9	ELOVL3 (ENSSBOG00000028586) #10	NOLC1 (ENSSBOG00000031205) #12	PPRC1 (ENSSBOG00000021902) #13	LDB1 (ENSSBOG00000029453) #14	ARMH3 (ENSSBOG00000027965) #17	ENSSBOG00000028614	KCNIP2 (ENSSBOG00000029268) #18	OGA (ENSSBOG00000024431) #19	NPM3 (ENSSBOG00000027661) ##20	FGF8 (ENSSBOG00000026891) #21	ENSSBOG00000026520	FBXW4 (ENSSBOG00000036214) #22	DPCD (ENSSBOG00000024659) #23	POLL (ENSSBOG00000035823) #24	BTRC (ENSSBOG00000034480) #25	LBX1 (ENSSBOG00000026504) #26	ENSSBOG00000030742 #28	KAZALD1 (ENSSBOG00000032715) #29	SFXN3 (ENSSBOG00000032559) #30	PDZD7 (ENSSBOG00000035647) #31	LZTS2 (ENSSBOG00000032084) #32	TWNK (ENSSBOG00000020346) #33	MRPL43 (ENSSBOG00000022294) #35	SEMA4G (ENSSBOG00000026805) #37	SLF2 (ENSSBOG00000034063)	ENSSBOG00000036188	PAX2 (ENSSBOG00000030216)
Mas night monkey	MODERN SPECIES	658	CUEDC2 (ENSANAG00000038457)	FBXL15 (ENSANAG00000005171)	PSD (ENSANAG00000020954)	NFKB2 (ENSANAG00000038091) #7	GBF1 (ENSANAG00000028077) #8	PITX3 (ENSANAG00000023017) #9	ELOVL3 (ENSANAG00000037453) #10	PPRC1 (ENSANAG00000029448) #13	LDB1 (ENSANAG00000034893) #14	ENSANAG00000019621	ARMH3 (ENSANAG00000029091) #17	KCNIP2 (ENSANAG00000020362) #18	OGA (ENSANAG00000034639) #19	ENSANAG00000027082 ##20	FGF8 (ENSANAG00000031951) #21	FBXW4 (ENSANAG00000034872) #22	DPCD (ENSANAG00000036663) #23	POLL (ENSANAG00000021199) #24	BTRC (ENSANAG00000035347) #25	LBX1 (ENSANAG00000036814) #26	TLX1 (ENSANAG00000027104) #28	KAZALD1 (ENSANAG00000020414) #29	SFXN3 (ENSANAG00000035635) #30	ENSANAG00000021408	PDZD7 (ENSANAG00000023929) #31	LZTS2 (ENSANAG00000012310) #32	TWNK (ENSANAG00000022264) #33	MRPL43 (ENSANAG00000034938) #35	SEMA4G (ENSANAG00000030905) #37	SLF2 (ENSANAG00000031592)	PAX2 (ENSANAG00000008318)
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00910000147806	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00910000147806	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Orangutan	MODERN SPECIES	1	NFKB2 (ENSPPYG00000002599) #7	PSD (ENSPPYG00000002600)	GBF1 (ENSPPYG00000002598) #8	ENSPPYG00000002597 #9	ELOVL3 (ENSPPYG00000002596) #10	NOLC1 (ENSPPYG00000002595) #12	PPRC1 (ENSPPYG00000002594) #13	LDB1 (ENSPPYG00000002593) #14	HPS6 (ENSPPYG00000030981) #15	ARMH3 (ENSPPYG00000002592) #17	KCNIP2 (ENSPPYG00000002591) #18	OGA (ENSPPYG00000002590) #19	NPM3 (ENSPPYG00000002589) #20	FGF8 (ENSPPYG00000002588) #21	ENSPPYG00000002587	FBXW4 (ENSPPYG00000002586) #22	DPCD (ENSPPYG00000002585) #23	POLL (ENSPPYG00000002584) #24	BTRC (ENSPPYG00000002583) #25	LBX1 (ENSPPYG00000002582) #26	TLX1 (ENSPPYG00000002581) #28	KAZALD1 (ENSPPYG00000002580) #29	SFXN3 (ENSPPYG00000002579) #30	PDZD7 (ENSPPYG00000002578) #31	LZTS2 (ENSPPYG00000002577) #32	TWNK (ENSPPYG00000002576) #33	ENSPPYG00000002575 #35	SEMA4G (ENSPPYG00000002574) #37	SLF2 (ENSPPYG00000002573)	ENSPPYG00000002572	HIF1AN (ENSPPYG00000002571)
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029.c #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00910000147806	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029.c #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Pan	ANCESTRAL SPECIES	16	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029.c #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Chimpanzee	MODERN SPECIES	1	FBXL15 (ENSPTRG00000002890)	PSD (ENSPTRG00000002889)	NFKB2 (ENSPTRG00000002888) #7	GBF1 (ENSPTRG00000002887) #8	PITX3 (ENSPTRG00000002886) #9	ELOVL3 (ENSPTRG00000002885) #10	NOLC1 (ENSPTRG00000023882) #12	PPRC1 (ENSPTRG00000002883) #13	LDB1 (ENSPTRG00000023411) #14	HPS6 (ENSPTRG00000002881) #15	ARMH3 (ENSPTRG00000002879) #17	KCNIP2 (ENSPTRG00000002878) #18	OGA (ENSPTRG00000002876) #19	NPM3 (ENSPTRG00000002875) #20	FGF8 (ENSPTRG00000002874) #21	FBXW4 (ENSPTRG00000048959) #22	DPCD (ENSPTRG00000002871) #23	POLL (ENSPTRG00000002870) #24	BTRC (ENSPTRG00000002869) #25	LBX1 (ENSPTRG00000002868) #26	TLX1 (ENSPTRG00000002867) #28	KAZALD1 (ENSPTRG00000002865) #29	SFXN3 (ENSPTRG00000002864) #30	PDZD7 (ENSPTRG00000002862) #31	LZTS2 (ENSPTRG00000042870) #32	TWNK (ENSPTRG00000029751) #33	MRPL43 (ENSPTRG00000002858) #35	SEMA4G (ENSPTRG00000052672) #37	SLF2 (ENSPTRG00000002855)	PAX2 (ENSPTRG00000002853)	HIF1AN (ENSPTRG00000002852)
Bonobo	MODERN SPECIES	1	PSD (ENSPPAG00000040288)	NFKB2 (ENSPPAG00000030613) #7	GBF1 (ENSPPAG00000042922) #8	ENSPPAG00000008353 #9	ELOVL3 (ENSPPAG00000040688) #10	ENSPPAG00000043390	NOLC1 (ENSPPAG00000038082) #12	PPRC1 (ENSPPAG00000032544) #13	LDB1 (ENSPPAG00000024094) #14	HPS6 (ENSPPAG00000011993) #15	ARMH3 (ENSPPAG00000040734) #17	KCNIP2 (ENSPPAG00000029455) #18	OGA (ENSPPAG00000030424) #19	NPM3 (ENSPPAG00000040517) #20	FGF8 (ENSPPAG00000039985) #21	ENSPPAG00000025691 #22	DPCD (ENSPPAG00000038194) #23	POLL (ENSPPAG00000036999) #24	BTRC (ENSPPAG00000034237) #25	TLX1 (ENSPPAG00000040366) #28	KAZALD1 (ENSPPAG00000029890) #29	SFXN3 (ENSPPAG00000029879) #30	PDZD7 (ENSPPAG00000036974) #31	LZTS2 (ENSPPAG00000003235) #32	TWNK (ENSPPAG00000035055) #33	ENSPPAG00000042828 #35	SEMA4G (ENSPPAG00000039460) #37	SLF2 (ENSPPAG00000040627)	ENSPPAG00000004195	HIF1AN (ENSPPAG00000035861)	NDUFB8 (ENSPPAG00000025513)
Human	MODERN SPECIES	1	FBXL15 (ENSG00000107872)	PSD (ENSG00000059915)	NFKB2 (ENSG00000077150) #7	GBF1 (ENSG00000107862) #8	PITX3 (ENSG00000107859) #9	ELOVL3 (ENSG00000119915) #10	NOLC1 (ENSG00000166197) #12	PPRC1 (ENSG00000148840) #13	LDB1 (ENSG00000198728) #14	HPS6 (ENSG00000166189) #15	ARMH3 (ENSG00000120029) #17	KCNIP2 (ENSG00000120049) #18	OGA (ENSG00000198408) #19	NPM3 (ENSG00000107833) #20	FGF8 (ENSG00000107831) #21	FBXW4 (ENSG00000107829) #22	POLL (ENSG00000166169) #24	DPCD (ENSG00000166171) #23	BTRC (ENSG00000166167) #25	LBX1 (ENSG00000138136) #26	TLX1 (ENSG00000107807) #28	KAZALD1 (ENSG00000107821) #29	SFXN3 (ENSG00000107819) #30	PDZD7 (ENSG00000186862) #31	LZTS2 (ENSG00000107816) #32	TWNK (ENSG00000107815) #33	SEMA4G (ENSG00000095539) #37	MRPL43 (ENSG00000055950) #35	SLF2 (ENSG00000119906)	PAX2 (ENSG00000075891)	HIF1AN (ENSG00000166135)
Gorilla	MODERN SPECIES	1	FBXL15 (ENSGGOG00000006993)	PSD (ENSGGOG00000006985)	NFKB2 (ENSGGOG00000006971) #7	GBF1 (ENSGGOG00000006948) #8	PITX3 (ENSGGOG00000026128) #9	ELOVL3 (ENSGGOG00000024219) #10	NOLC1 (ENSGGOG00000002158) #12	PPRC1 (ENSGGOG00000002155) #13	LDB1 (ENSGGOG00000002151) #14	HPS6 (ENSGGOG00000008892) #15	ARMH3 (ENSGGOG00000006539) #17	KCNIP2 (ENSGGOG00000006534) #18	OGA (ENSGGOG00000002901) #19	NPM3 (ENSGGOG00000027500) #20	FGF8 (ENSGGOG00000015108) #21	ENSGGOG00000005039 #22	DPCD (ENSGGOG00000005035) #23	POLL (ENSGGOG00000005029) #24	ENSGGOG00000038754	BTRC (ENSGGOG00000005023) #25	LBX1 (ENSGGOG00000012521) #26	TLX1 (ENSGGOG00000005880) #28	KAZALD1 (ENSGGOG00000004516) #29	SFXN3 (ENSGGOG00000015442) #30	PDZD7 (ENSGGOG00000015436) #31	LZTS2 (ENSGGOG00000015430) #32	TWNK (ENSGGOG00000015421) #33	ENSGGOG00000023716 #35	SEMA4G (ENSGGOG00000025153) #37	SLF2 (ENSGGOG00000002070)	ENSGGOG00000014908
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000005029.d #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000005029.d #22
Pan	ANCESTRAL SPECIES																	ENSGT00390000005029.d #22
Chimpanzee	MODERN SPECIES	13	ENSPTRG00000046633	ENSPTRG00000044044	IGLV2-8 (ENSPTRG00000044777)	ENSPTRG00000052793	ENSPTRG00000049497	ENSPTRG00000042669	IGLC3 (ENSPTRG00000052527)	ENSPTRG00000050283	ENSPTRG00000042833	IGLC7 (ENSPTRG00000042977)	RSPH14 (ENSPTRG00000014134)	GNAZ (ENSPTRG00000014135)	RAB36 (ENSPTRG00000014136)	ENSPTRG00000049549	BCR (ENSPTRG00000014138)	ENSPTRG00000045141 #22	ENSPTRG00000044750	ENSPTRG00000014143	ENSPTRG00000043139	DRICH1 (ENSPTRG00000014145)	ENSPTRG00000046832	ENSPTRG00000014169	RGL4 (ENSPTRG00000014147)	ENSPTRG00000051783	ENSPTRG00000050549	ENSPTRG00000049144	ENSPTRG00000043596	ENSPTRG00000014131	ZNF280A (ENSPTRG00000045083)	PRAME (ENSPTRG00000014123)	ENSPTRG00000043689
Gibbon	MODERN SPECIES	18	ENSNLEG00000015114	NFKB2 (ENSNLEG00000015079) #7	GBF1 (ENSNLEG00000015044) #8	PITX3 (ENSNLEG00000015040) #9	ELOVL3 (ENSNLEG00000015039) #10	NOLC1 (ENSNLEG00000015012) #12	PPRC1 (ENSNLEG00000014996) #13	LDB1 (ENSNLEG00000014982) #14	HPS6 (ENSNLEG00000019112) #15	ARMH3 (ENSNLEG00000014964) #17	ENSNLEG00000030076	ENSNLEG00000014924 #18	OGA (ENSNLEG00000014902) #19	ENSNLEG00000029281 #20	FGF8 (ENSNLEG00000014890) #21	ENSNLEG00000014885 #22	DPCD (ENSNLEG00000014878) #23	POLL (ENSNLEG00000014861) #24	BTRC (ENSNLEG00000014843) #25	ENSNLEG00000028284	LBX1 (ENSNLEG00000014840) #26	TLX1 (ENSNLEG00000029481) #28	KAZALD1 (ENSNLEG00000035599) #29	SFXN3 (ENSNLEG00000014831) #30	PDZD7 (ENSNLEG00000014823) #31	LZTS2 (ENSNLEG00000014822) #32	TWNK (ENSNLEG00000014818) #33	ENSNLEG00000014812 #35	SEMA4G (ENSNLEG00000014804) #37	SLF2 (ENSNLEG00000014791)	ENSNLEG00000014786
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.m #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT01100000263577.a.a.b.b.a.a.b.a.a.a.a	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.m #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000153294.m.a.c.b.p.d
Rhesus	MODERN SPECIES	19	MFSD13A (ENSMMUG00000011948)	ENSMMUG00000003000	GBF1 (ENSMMUG00000002985) #8	PITX3 (ENSMMUG00000056167) #9	ELOVL3 (ENSMMUG00000022752) #10	NOLC1 (ENSMMUG00000001183) #12	PPRC1 (ENSMMUG00000001186) #13	LDB1 (ENSMMUG00000009375) #14	ENSMMUG00000056725	HPS6 (ENSMMUG00000009374) #15	ARMH3 (ENSMMUG00000001539) #17	KCNIP2 (ENSMMUG00000015776) #18	OGA (ENSMMUG00000015775) #19	NPM3 (ENSMMUG00000015774) #20	FGF8 (ENSMMUG00000015771) #21	FBXW4 (ENSMMUG00000052198) #22	DPCD (ENSMMUG00000006751) #23	POLL (ENSMMUG00000006747) #24	BTRC (ENSMMUG00000006741) #25	LBX1 (ENSMMUG00000060144) #26	TLX1 (ENSMMUG00000017667) #28	KAZALD1 (ENSMMUG00000017668) #29	SFXN3 (ENSMMUG00000022620) #30	LZTS2 (ENSMMUG00000010674) #32	TWNK (ENSMMUG00000064033) #33	MRPL43 (ENSMMUG00000010679) #35	SEMA4G (ENSMMUG00000010680) #37	SLF2 (ENSMMUG00000013418)	PAX2 (ENSMMUG00000009163)	ENSMMUG00000040838	ENSMMUG00000030563
Crab-eating macaque	MODERN SPECIES	19	NFKB2 (ENSMFAG00000031139) #7	ENSMFAG00000047401	GBF1 (ENSMFAG00000002812) #8	PITX3 (ENSMFAG00000045143) #9	ELOVL3 (ENSMFAG00000036362) #10	NOLC1 (ENSMFAG00000044654) #12	ENSMFAG00000038589 #13	LDB1 (ENSMFAG00000041257) #14	ENSMFAG00000061163	ENSMFAG00000051632	ARMH3 (ENSMFAG00000044833) #17	KCNIP2 (ENSMFAG00000046056) #18	OGA (ENSMFAG00000032188) #19	NPM3 (ENSMFAG00000041878) #20	FGF8 (ENSMFAG00000003751) #21	FBXW4 (ENSMFAG00000044810) #22	DPCD (ENSMFAG00000036058) #23	POLL (ENSMFAG00000043080) #24	BTRC (ENSMFAG00000005295) #25	TLX1 (ENSMFAG00000045878) #28	KAZALD1 (ENSMFAG00000063924) #29	SFXN3 (ENSMFAG00000035501) #30	PDZD7 (ENSMFAG00000037794) #31	LZTS2 (ENSMFAG00000048904) #32	TWNK (ENSMFAG00000032824) #33	MRPL43 (ENSMFAG00000036954) #35	SEMA4G (ENSMFAG00000038405) #37	SLF2 (ENSMFAG00000042449)	PAX2 (ENSMFAG00000041514)	ENSMFAG00000004864	HIF1AN (ENSMFAG00000043376)
Pig-tailed macaque	MODERN SPECIES	550	FBXL15 (ENSMNEG00000037370)	PSD (ENSMNEG00000037103)	NFKB2 (ENSMNEG00000030201) #7	GBF1 (ENSMNEG00000030880) #8	PITX3 (ENSMNEG00000027087) #9	ELOVL3 (ENSMNEG00000026432) #10	NOLC1 (ENSMNEG00000033199) #12	PPRC1 (ENSMNEG00000031603) #13	LDB1 (ENSMNEG00000039832) #14	HPS6 (ENSMNEG00000003739) #15	ARMH3 (ENSMNEG00000027491) #17	KCNIP2 (ENSMNEG00000033420) #18	OGA (ENSMNEG00000042719) #19	NPM3 (ENSMNEG00000039999) #20	FGF8 (ENSMNEG00000044546) #21	FBXW4 (ENSMNEG00000007347) #22	DPCD (ENSMNEG00000039583) #23	ENSMNEG00000041174	POLL (ENSMNEG00000032214) #24	BTRC (ENSMNEG00000043926) #25	LBX1 (ENSMNEG00000003768) #26	TLX1 (ENSMNEG00000039702) #28	KAZALD1 (ENSMNEG00000041154) #29	SFXN3 (ENSMNEG00000041774) #30	PDZD7 (ENSMNEG00000036573) #31	ENSMNEG00000000753	LZTS2 (ENSMNEG00000022148) #32	TWNK (ENSMNEG00000041560) #33	MRPL43 (ENSMNEG00000038269) #35	SEMA4G (ENSMNEG00000029411) #37	SLF2 (ENSMNEG00000042692)
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Olive baboon	MODERN SPECIES	2	FBXL15 (ENSPANG00000021009)	PSD (ENSPANG00000021011)	NFKB2 (ENSPANG00000021013) #7	GBF1 (ENSPANG00000021018) #8	PITX3 (ENSPANG00000021020) #9	ELOVL3 (ENSPANG00000021015) #10	NOLC1 (ENSPANG00000021014) #12	PPRC1 (ENSPANG00000021042) #13	LDB1 (ENSPANG00000021043) #14	HPS6 (ENSPANG00000004207) #15	ARMH3 (ENSPANG00000021051) #17	KCNIP2 (ENSPANG00000021049) #18	OGA (ENSPANG00000021048) #19	NPM3 (ENSPANG00000021046) #20	FGF8 (ENSPANG00000021045) #21	FBXW4 (ENSPANG00000021059) #22	DPCD (ENSPANG00000021068) #23	POLL (ENSPANG00000021067) #24	BTRC (ENSPANG00000021065) #25	ENSPANG00000045293	LBX1 (ENSPANG00000021064) #26	ENSPANG00000040129	TLX1 (ENSPANG00000021063) #28	KAZALD1 (ENSPANG00000021061) #29	SFXN3 (ENSPANG00000021121) #30	PDZD7 (ENSPANG00000021127) #31	LZTS2 (ENSPANG00000021126) #32	TWNK (ENSPANG00000021123) #33	MRPL43 (ENSPANG00000021122) #35	SEMA4G (ENSPANG00000021137) #37	SLF2 (ENSPANG00000021133)
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Sooty mangabey	MODERN SPECIES	598	FBXL15 (ENSCATG00000038266)	PSD (ENSCATG00000029120)	NFKB2 (ENSCATG00000033674) #7	GBF1 (ENSCATG00000041222) #8	PITX3 (ENSCATG00000035980) #9	ELOVL3 (ENSCATG00000029918) #10	NOLC1 (ENSCATG00000020949) #12	PPRC1 (ENSCATG00000029634) #13	LDB1 (ENSCATG00000041139) #14	HPS6 (ENSCATG00000007175) #15	ARMH3 (ENSCATG00000044859) #17	KCNIP2 (ENSCATG00000037631) #18	OGA (ENSCATG00000032677) #19	NPM3 (ENSCATG00000013755) #20	FGF8 (ENSCATG00000032104) #21	FBXW4 (ENSCATG00000042023) #22	DPCD (ENSCATG00000015600) #23	POLL (ENSCATG00000030579) #24	BTRC (ENSCATG00000041687) #25	LBX1 (ENSCATG00000015241) #26	TLX1 (ENSCATG00000027146) #28	KAZALD1 (ENSCATG00000012292) #29	SFXN3 (ENSCATG00000031461) #30	ENSCATG00000013628	PDZD7 (ENSCATG00000041708) #31	LZTS2 (ENSCATG00000035009) #32	TWNK (ENSCATG00000031735) #33	MRPL43 (ENSCATG00000045001) #35	SEMA4G (ENSCATG00000040594) #37	SLF2 (ENSCATG00000009305)	PAX2 (ENSCATG00000040463)
Drill	MODERN SPECIES	660	CUEDC2 (ENSMLEG00000033705)	FBXL15 (ENSMLEG00000031428)	PSD (ENSMLEG00000007902)	NFKB2 (ENSMLEG00000025549) #7	GBF1 (ENSMLEG00000030526) #8	ENSMLEG00000041298 #9	ELOVL3 (ENSMLEG00000042786) #10	NOLC1 (ENSMLEG00000040773) #12	PPRC1 (ENSMLEG00000035092) #13	LDB1 (ENSMLEG00000029239) #14	ARMH3 (ENSMLEG00000040244) #17	KCNIP2 (ENSMLEG00000040604) #18	OGA (ENSMLEG00000034257) #19	NPM3 (ENSMLEG00000038129) #20	FGF8 (ENSMLEG00000038840) #21	FBXW4 (ENSMLEG00000039840) #22	DPCD (ENSMLEG00000036892) #23	POLL (ENSMLEG00000044464) #24	BTRC (ENSMLEG00000037020) #25	LBX1 (ENSMLEG00000038173) #26	TLX1 (ENSMLEG00000036491) #28	KAZALD1 (ENSMLEG00000041241) #29	SFXN3 (ENSMLEG00000041643) #30	ENSMLEG00000018361	PDZD7 (ENSMLEG00000044282) #31	LZTS2 (ENSMLEG00000043006) #32	TWNK (ENSMLEG00000028857) #33	PDIA2 (ENSMLEG00000027539)	MRPL43 (ENSMLEG00000031351) #35	SEMA4G (ENSMLEG00000032692) #37	SLF2 (ENSMLEG00000043602)
Vervet Monkey	MODERN SPECIES	28	CUEDC2 (ENSCSAG00000005434)	PSD (ENSCSAG00000005438)	NFKB2 (ENSCSAG00000005442) #7	GBF1 (ENSCSAG00000005450) #8	PITX3 (ENSCSAG00000005456) #9	ELOVL3 (ENSCSAG00000005460) #10	NOLC1 (ENSCSAG00000005465) #12	PPRC1 (ENSCSAG00000005471) #13	LDB1 (ENSCSAG00000005474) #14	HPS6 (ENSCSAG00000018450) #15	ARMH3 (ENSCSAG00000005491) #17	KCNIP2 (ENSCSAG00000005501) #18	OGA (ENSCSAG00000005507) #19	NPM3 (ENSCSAG00000005509) #20	FGF8 (ENSCSAG00000005512) #21	FBXW4 (ENSCSAG00000005515) #22	DPCD (ENSCSAG00000005519) #23	POLL (ENSCSAG00000005523) #24	BTRC (ENSCSAG00000005528) #25	LBX1 (ENSCSAG00000005532) #26	TLX1 (ENSCSAG00000005535) #28	KAZALD1 (ENSCSAG00000005540) #29	SFXN3 (ENSCSAG00000005542) #30	ENSCSAG00000005544 #31	LZTS2 (ENSCSAG00000005545) #32	TWNK (ENSCSAG00000005548) #33	MRPL43 (ENSCSAG00000005558) #35	SEMA4G (ENSCSAG00000005560) #37	SLF2 (ENSCSAG00000005566)	PAX2 (ENSCSAG00000005568)	HIF1AN (ENSCSAG00000005570)
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Black snub-nosed monkey	MODERN SPECIES	1538	FBXL15 (ENSRBIG00000042023)	PSD (ENSRBIG00000042590)	NFKB2 (ENSRBIG00000028068) #7	GBF1 (ENSRBIG00000005903) #8	PITX3 (ENSRBIG00000035684) #9	ELOVL3 (ENSRBIG00000025844) #10	NOLC1 (ENSRBIG00000032216) #12	PPRC1 (ENSRBIG00000027711) #13	LDB1 (ENSRBIG00000023954) #14	HPS6 (ENSRBIG00000021408) #15	ARMH3 (ENSRBIG00000030224) #17	KCNIP2 (ENSRBIG00000036933) #18	OGA (ENSRBIG00000042557) #19	NPM3 (ENSRBIG00000039086) #20	FGF8 (ENSRBIG00000038141) #21	FBXW4 (ENSRBIG00000029703) #22	DPCD (ENSRBIG00000029630) #23	ENSRBIG00000025168	POLL (ENSRBIG00000034819) #24	BTRC (ENSRBIG00000000373) #25	LBX1 (ENSRBIG00000043576) #26	TLX1 (ENSRBIG00000028309) #28	KAZALD1 (ENSRBIG00000029657) #29	SFXN3 (ENSRBIG00000033345) #30	PDZD7 (ENSRBIG00000030466) #31	ENSRBIG00000006061	LZTS2 (ENSRBIG00000030156) #32	TWNK (ENSRBIG00000042725) #33	MRPL43 (ENSRBIG00000029374) #35	SEMA4G (ENSRBIG00000025014) #37	SLF2 (ENSRBIG00000027825)
Golden snub-nosed monkey	MODERN SPECIES	3053	FBXL15 (ENSRROG00000033504)	PSD (ENSRROG00000041323)	NFKB2 (ENSRROG00000034177) #7	GBF1 (ENSRROG00000033162) #8	PITX3 (ENSRROG00000020365) #9	ELOVL3 (ENSRROG00000040217) #10	NOLC1 (ENSRROG00000038056) #12	PPRC1 (ENSRROG00000044599) #13	LDB1 (ENSRROG00000033778) #14	HPS6 (ENSRROG00000015252) #15	ARMH3 (ENSRROG00000032495) #17	KCNIP2 (ENSRROG00000029744) #18	OGA (ENSRROG00000045455) #19	NPM3 (ENSRROG00000029912) #20	FGF8 (ENSRROG00000038994) #21	FBXW4 (ENSRROG00000038393) #22	ENSRROG00000023920	DPCD (ENSRROG00000044275) #23	POLL (ENSRROG00000032669) #24	BTRC (ENSRROG00000030265) #25	LBX1 (ENSRROG00000044455) #26	TLX1 (ENSRROG00000044869) #28	KAZALD1 (ENSRROG00000028521) #29	SFXN3 (ENSRROG00000042473) #30	PDZD7 (ENSRROG00000042033) #31	LZTS2 (ENSRROG00000044508) #32	TWNK (ENSRROG00000034001) #33	MRPL43 (ENSRROG00000036241) #35	SEMA4G (ENSRROG00000029089) #37	SLF2 (ENSRROG00000032382)	PAX2 (ENSRROG00000036335)
Tarsier	MODERN SPECIES	2654																FBXW4 (ENSTSYG00000036743) #22	DPCD (ENSTSYG00000036432) #23	POLL (ENSTSYG00000030944) #24
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00940000166765	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Greater bamboo lemur	MODERN SPECIES	375																FBXW4 (ENSPSMG00000010859) #22	DPCD (ENSPSMG00000010850) #23	POLL (ENSPSMG00000010806) #24	BTRC (ENSPSMG00000009920) #25	LBX1 (ENSPSMG00000009389) #26	TLX1 (ENSPSMG00000009380) #28	KAZALD1 (ENSPSMG00000009371) #29	SFXN3 (ENSPSMG00000009356) #30	ENSPSMG00000009339	PDZD7 (ENSPSMG00000009272) #31	LZTS2 (ENSPSMG00000009191) #32	TWNK (ENSPSMG00000009185) #33	ENSPSMG00000009174 #35	SEMA4G (ENSPSMG00000009158) #37	SLF2 (ENSPSMG00000009144)	ENSPSMG00000009133
Coquerels sifaka	MODERN SPECIES	870	CUEDC2 (ENSPCOG00000028615)	FBXL15 (ENSPCOG00000025091)	PSD (ENSPCOG00000014657)	NFKB2 (ENSPCOG00000024535) #7	GBF1 (ENSPCOG00000027442) #8	PITX3 (ENSPCOG00000018343) #9	ELOVL3 (ENSPCOG00000022173) #10	ENSPCOG00000028588	PPRC1 (ENSPCOG00000025917) #13	LDB1 (ENSPCOG00000014358) #14	ARMH3 (ENSPCOG00000019882) #17	KCNIP2 (ENSPCOG00000024556) #18	OGA (ENSPCOG00000014940) #19	NPM3 (ENSPCOG00000014704) #20	FGF8 (ENSPCOG00000017981) #21	FBXW4 (ENSPCOG00000021206) #22	DPCD (ENSPCOG00000017781) #23	POLL (ENSPCOG00000019314) #24	ENSPCOG00000026908	ENSPCOG00000010924	BTRC (ENSPCOG00000020549) #25	LBX1 (ENSPCOG00000019643) #26	TLX1 (ENSPCOG00000000103) #28	KAZALD1 (ENSPCOG00000016724) #29	SFXN3 (ENSPCOG00000025511) #30	PDZD7 (ENSPCOG00000026114) #31	LZTS2 (ENSPCOG00000023474) #32	TWNK (ENSPCOG00000014623) #33	MRPL43 (ENSPCOG00000027271) #35	SEMA4G (ENSPCOG00000023281) #37	SLF2 (ENSPCOG00000025314)
Mouse lemur	MODERN SPECIES	6	CUEDC2 (ENSMICG00000043889)	FBXL15 (ENSMICG00000042452)	PSD (ENSMICG00000011877)	NFKB2 (ENSMICG00000011856) #7	GBF1 (ENSMICG00000011832) #8	PITX3 (ENSMICG00000045312) #9	ELOVL3 (ENSMICG00000048136) #10	NOLC1 (ENSMICG00000011811) #12	PPRC1 (ENSMICG00000011794) #13	LDB1 (ENSMICG00000011785) #14	ARMH3 (ENSMICG00000011767) #17	KCNIP2 (ENSMICG00000011754) #18	OGA (ENSMICG00000011745) #19	NPM3 (ENSMICG00000044119) #20	FGF8 (ENSMICG00000011733) #21	FBXW4 (ENSMICG00000030032) #22	DPCD (ENSMICG00000007381) #23	POLL (ENSMICG00000044578) #24	ENSMICG00000032738	BTRC (ENSMICG00000007365) #25	LBX1 (ENSMICG00000042752) #26	TLX1 (ENSMICG00000000020) #28	KAZALD1 (ENSMICG00000042680) #29	SFXN3 (ENSMICG00000000018) #30	PDZD7 (ENSMICG00000000017) #31	LZTS2 (ENSMICG00000000016) #32	TWNK (ENSMICG00000045106) #33	ENSMICG00000000014 #35	SEMA4G (ENSMICG00000030739) #37	SLF2 (ENSMICG00000001371)	PAX2 (ENSMICG00000001357)
Bushbaby	MODERN SPECIES	136	FBXL15 (ENSOGAG00000016397)	PSD (ENSOGAG00000016389)	NFKB2 (ENSOGAG00000016379) #7	GBF1 (ENSOGAG00000016366) #8	PITX3 (ENSOGAG00000029285) #9	ELOVL3 (ENSOGAG00000016363) #10	NOLC1 (ENSOGAG00000016359) #12	PPRC1 (ENSOGAG00000016354) #13	LDB1 (ENSOGAG00000016349) #14	HPS6 (ENSOGAG00000033543) #15	ARMH3 (ENSOGAG00000010009) #17	KCNIP2 (ENSOGAG00000010006) #18	ENSOGAG00000010002 #19	NPM3 (ENSOGAG00000010001) #20	FGF8 (ENSOGAG00000024920) #21	FBXW4 (ENSOGAG00000033125) #22	POLL (ENSOGAG00000012042) #24	BTRC (ENSOGAG00000014623) #25	LBX1 (ENSOGAG00000008679) #26	TLX1 (ENSOGAG00000013614) #28	KAZALD1 (ENSOGAG00000011722) #29	SFXN3 (ENSOGAG00000012881) #30	PDZD7 (ENSOGAG00000012875) #31	LZTS2 (ENSOGAG00000012873) #32	TWNK (ENSOGAG00000029204) #33	MRPL43 (ENSOGAG00000030715) #35	SEMA4G (ENSOGAG00000015286) #37	SLF2 (ENSOGAG00000015280)	PAX2 (ENSOGAG00000015274)	HIF1AN (ENSOGAG00000010425)	ENSOGAG00000030711
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Glires	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Rodentia	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Kangaroo rat	MODERN SPECIES	355	Nfkb2 (ENSDORG00000013409) #7	ENSDORG00000013406 #8	ENSDORG00000024842 #8	Pitx3 (ENSDORG00000023993) #9	Elovl3 (ENSDORG00000027255) #10	Nolc1 (ENSDORG00000001056) #12	Pprc1 (ENSDORG00000001046) #13	Ldb1 (ENSDORG00000003498) #14	Hps6 (ENSDORG00000028123) #15	ENSDORG00000023337	Armh3 (ENSDORG00000003496) #17	Kcnip2 (ENSDORG00000003495) #18	Oga (ENSDORG00000003493) #19	Npm3 (ENSDORG00000003491) #20	Fgf8 (ENSDORG00000029227) #21	Fbxw4 (ENSDORG00000014212) #22	Dpcd (ENSDORG00000014209) #23	Poll (ENSDORG00000024173) #24	Btrc (ENSDORG00000014204) #25	Lbx1 (ENSDORG00000029567) #26	ENSDORG00000025952 #28	Kazald1 (ENSDORG00000016417) #29	Sfxn3 (ENSDORG00000016415) #30	ENSDORG00000016413 #31	Lzts2 (ENSDORG00000016411) #32	Twnk (ENSDORG00000004461) #33	Mrpl43 (ENSDORG00000023986) #35	Sema4g (ENSDORG00000004459) #37	Slf2 (ENSDORG00000004458)	Pax2 (ENSDORG00000006193)	Hif1an (ENSDORG00000026469)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000018772	ENSJJAG00000010788 #8	ENSJJAG00000023637 #8	Pitx3 (ENSJJAG00000020721) #9	Elovl3 (ENSJJAG00000020437) #10	Nolc1 (ENSJJAG00000021131) #12	ENSJJAG00000005177 #13	ENSJJAG00000024088 #13	Ldb1 (ENSJJAG00000012307) #14	Hps6 (ENSJJAG00000011662) #15	Armh3 (ENSJJAG00000018861) #17	Kcnip2 (ENSJJAG00000019358) #18	Oga (ENSJJAG00000020565) #19	Npm3 (ENSJJAG00000018907) #20	Fgf8 (ENSJJAG00000014440) #21	ENSJJAG00000016263 #22	Dpcd (ENSJJAG00000010119) #23	Poll (ENSJJAG00000024104) #24	Btrc (ENSJJAG00000011813) #25	Lbx1 (ENSJJAG00000021756) #26	ENSJJAG00000006430 #28	Kazald1 (ENSJJAG00000021687) #29	Sfxn3 (ENSJJAG00000016145) #30	ENSJJAG00000014285 #31	Lzts2 (ENSJJAG00000015056) #32	ENSJJAG00000006388 #33	Mrpl43 (ENSJJAG00000023922) #35	Sema4g (ENSJJAG00000000673) #37	Slf2 (ENSJJAG00000023625)	Pax2 (ENSJJAG00000000526)	Hif1an (ENSJJAG00000013793)
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300	Psd (ENSNGAG00000011541)	Nfkb2 (ENSNGAG00000022988) #7	Gbf1 (ENSNGAG00000006095) #8	Pitx3 (ENSNGAG00000021500) #9	Elovl3 (ENSNGAG00000013825) #10	Nolc1 (ENSNGAG00000024139) #12	Pprc1 (ENSNGAG00000016516) #13	Ldb1 (ENSNGAG00000024157) #14	ENSNGAG00000021169	Hps6 (ENSNGAG00000012214) #15	Armh3 (ENSNGAG00000023147) #17	Kcnip2 (ENSNGAG00000024132) #18	Oga (ENSNGAG00000011804) #19	ENSNGAG00000022833 #20	Fgf8 (ENSNGAG00000018999) #21	Fbxw4 (ENSNGAG00000022749) #22	Dpcd (ENSNGAG00000015959) #23	Poll (ENSNGAG00000021402) #24	Btrc (ENSNGAG00000001803) #25	ENSNGAG00000023625	Lbx1 (ENSNGAG00000023979) #26	Tlx1 (ENSNGAG00000024255) #28	Kazald1 (ENSNGAG00000011414) #29	Sfxn3 (ENSNGAG00000017442) #30	ENSNGAG00000004602 #31	Lzts2 (ENSNGAG00000023942) #32	Twnk (ENSNGAG00000023645) #33	Mrpl43 (ENSNGAG00000023476) #35	Sema4g (ENSNGAG00000014131) #37	Slf2 (ENSNGAG00000022141)	Pax2 (ENSNGAG00000011967)
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Murinae	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801.d #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Mus	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801.d #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801.d #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.p #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801.d #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.p #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801.d #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.p #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
spretus	MODERN SPECIES	10	Fbxl15 (MGP_SPRETEiJ_G0023954)	Psd (MGP_SPRETEiJ_G0023953)	Nfkb2 (MGP_SPRETEiJ_G0023952) #7	Gbf1 (MGP_SPRETEiJ_G0023951) #8	Pitx3 (MGP_SPRETEiJ_G0023950) #9	Elovl3 (MGP_SPRETEiJ_G0023949) #10	Nolc1 (MGP_SPRETEiJ_G0023948) #12	Pprc1 (MGP_SPRETEiJ_G0023947) #13	Ldb1 (MGP_SPRETEiJ_G0023946) #14	Hps6 (MGP_SPRETEiJ_G0023945) #15	Armh3 (MGP_SPRETEiJ_G0023944) #17	Kcnip2 (MGP_SPRETEiJ_G0023943) #18	Oga (MGP_SPRETEiJ_G0023942) #19	Npm3 (MGP_SPRETEiJ_G0023941) #20	Fgf8 (MGP_SPRETEiJ_G0023940) #21	MGP_SPRETEiJ_G0023939 #22	Dpcd (MGP_SPRETEiJ_G0023938) #23	Poll (MGP_SPRETEiJ_G0023937) #24	Btrc (MGP_SPRETEiJ_G0023936) #25	Lbx1 (MGP_SPRETEiJ_G0023935) #26	Tlx1 (MGP_SPRETEiJ_G0023934) #28	Kazald1 (MGP_SPRETEiJ_G0023933) #29	Sfxn3 (MGP_SPRETEiJ_G0023932) #30	Pdzd7 (MGP_SPRETEiJ_G0023931) #31	Lzts2 (MGP_SPRETEiJ_G0023930) #32	Twnk (MGP_SPRETEiJ_G0023929) #33	Mrpl43 (MGP_SPRETEiJ_G0023928) #35	Sema4g (MGP_SPRETEiJ_G0023927) #37	Slf2 (MGP_SPRETEiJ_G0023926)	Pax2 (MGP_SPRETEiJ_G0023925)	Hif1an (MGP_SPRETEiJ_G0023924)
Steppe mouse	MODERN SPECIES	3317	Fbxl15 (ENSMSIG00000011465)	Psd (ENSMSIG00000011495)	Nfkb2 (ENSMSIG00000011557) #7	Gbf1 (ENSMSIG00000011585) #8	Pitx3 (ENSMSIG00000011679) #9	Elovl3 (ENSMSIG00000011691) #10	Nolc1 (ENSMSIG00000011702) #12	Pprc1 (ENSMSIG00000011750) #13	Ldb1 (ENSMSIG00000011766) #14	Hps6 (ENSMSIG00000011802) #15	Armh3 (ENSMSIG00000011813) #17	ENSMSIG00000011884 #18	Oga (ENSMSIG00000012429) #19	Npm3 (ENSMSIG00000012497) #20	Fgf8 (ENSMSIG00000012521) #21	ENSMSIG00000012591 #22	ENSMSIG00000012629 #23	Poll (ENSMSIG00000012645) #24	Btrc (ENSMSIG00000012680) #25	Lbx1 (ENSMSIG00000012769) #26	Tlx1 (ENSMSIG00000012781) #28	Kazald1 (ENSMSIG00000012802) #29	Sfxn3 (ENSMSIG00000012828) #30	Pdzd7 (ENSMSIG00000012912) #31	ENSMSIG00000012980	Lzts2 (ENSMSIG00000012984) #32	Twnk (ENSMSIG00000013010) #33	Mrpl43 (ENSMSIG00000013030) #35	Sema4g (ENSMSIG00000013048) #37	Slf2 (ENSMSIG00000013125)	Pax2 (ENSMSIG00000013194)
Mouse	MODERN SPECIES	10	Fbxl15 (ENSMUSG00000025226)	Psd (ENSMUSG00000037126)	Nfkb2 (ENSMUSG00000025225) #7	Gbf1 (ENSMUSG00000025224) #8	Pitx3 (ENSMUSG00000025229) #9	Elovl3 (ENSMUSG00000038754) #10	Nolc1 (ENSMUSG00000015176) #12	Pprc1 (ENSMUSG00000055491) #13	Ldb1 (ENSMUSG00000025223) #14	Hps6 (ENSMUSG00000074811) #15	Armh3 (ENSMUSG00000039901) #17	Kcnip2 (ENSMUSG00000025221) #18	Oga (ENSMUSG00000025220) #19	Npm3 (ENSMUSG00000056209) #20	Fgf8 (ENSMUSG00000025219) #21	Fbxw4 (ENSMUSG00000040913) #22	Dpcd (ENSMUSG00000041035) #23	Poll (ENSMUSG00000025218) #24	Btrc (ENSMUSG00000025217) #25	Lbx1 (ENSMUSG00000025216) #26	Tlx1 (ENSMUSG00000025215) #28	Kazald1 (ENSMUSG00000025213) #29	Sfxn3 (ENSMUSG00000025212) #30	Pdzd7 (ENSMUSG00000074818) #31	Lzts2 (ENSMUSG00000035342) #32	Twnk (ENSMUSG00000025209) #33	Mrpl43 (ENSMUSG00000025208) #35	Sema4g (ENSMUSG00000025207) #37	Slf2 (ENSMUSG00000036097)	Pax2 (ENSMUSG00000004231)	Hif1an (ENSMUSG00000036450)
Ryukyu mouse	MODERN SPECIES	10	Fbxl15 (MGP_CAROLIEiJ_G0023033)	Psd (MGP_CAROLIEiJ_G0023032)	Nfkb2 (MGP_CAROLIEiJ_G0023031) #7	Gbf1 (MGP_CAROLIEiJ_G0023030) #8	Pitx3 (MGP_CAROLIEiJ_G0023029) #9	Elovl3 (MGP_CAROLIEiJ_G0023028) #10	Nolc1 (MGP_CAROLIEiJ_G0023027) #12	Pprc1 (MGP_CAROLIEiJ_G0023026) #13	Ldb1 (MGP_CAROLIEiJ_G0023025) #14	Hps6 (MGP_CAROLIEiJ_G0023024) #15	Armh3 (MGP_CAROLIEiJ_G0023023) #17	Kcnip2 (MGP_CAROLIEiJ_G0023022) #18	Oga (MGP_CAROLIEiJ_G0023021) #19	Npm3 (MGP_CAROLIEiJ_G0023020) #20	Fgf8 (MGP_CAROLIEiJ_G0023019) #21	Fbxw4 (MGP_CAROLIEiJ_G0023018) #22	Dpcd (MGP_CAROLIEiJ_G0023017) #23	Poll (MGP_CAROLIEiJ_G0023016) #24	Btrc (MGP_CAROLIEiJ_G0023015) #25	Lbx1 (MGP_CAROLIEiJ_G0023014) #26	Tlx1 (MGP_CAROLIEiJ_G0023013) #28	Kazald1 (MGP_CAROLIEiJ_G0023012) #29	Sfxn3 (MGP_CAROLIEiJ_G0023011) #30	Pdzd7 (MGP_CAROLIEiJ_G0023010) #31	Lzts2 (MGP_CAROLIEiJ_G0023009) #32	Twnk (MGP_CAROLIEiJ_G0023008) #33	Mrpl43 (MGP_CAROLIEiJ_G0023007) #35	Sema4g (MGP_CAROLIEiJ_G0023006) #37	Slf2 (MGP_CAROLIEiJ_G0023005)	Pax2 (MGP_CAROLIEiJ_G0023004)	Hif1an (MGP_CAROLIEiJ_G0023003)
Shrew mouse	MODERN SPECIES		Fbxl15 (MGP_PahariEiJ_G0014523)	Psd (MGP_PahariEiJ_G0014522)	Nfkb2 (MGP_PahariEiJ_G0014521) #7	Gbf1 (MGP_PahariEiJ_G0014520) #8	Pitx3 (MGP_PahariEiJ_G0014519) #9	Elovl3 (MGP_PahariEiJ_G0014518) #10	Nolc1 (MGP_PahariEiJ_G0014517) #12	Pprc1 (MGP_PahariEiJ_G0014516) #13	Ldb1 (MGP_PahariEiJ_G0014515) #14	Hps6 (MGP_PahariEiJ_G0014514) #15	Armh3 (MGP_PahariEiJ_G0014513) #17	Kcnip2 (MGP_PahariEiJ_G0014512) #18	Oga (MGP_PahariEiJ_G0014511) #19	Npm3 (MGP_PahariEiJ_G0014510) #20	Fgf8 (MGP_PahariEiJ_G0014509) #21	MGP_PahariEiJ_G0014508 #22	Dpcd (MGP_PahariEiJ_G0014507) #23	Poll (MGP_PahariEiJ_G0014506) #24	Btrc (MGP_PahariEiJ_G0014505) #25	Lbx1 (MGP_PahariEiJ_G0014504) #26	Tlx1 (MGP_PahariEiJ_G0014503) #28	Kazald1 (MGP_PahariEiJ_G0014502) #29	Sfxn3 (MGP_PahariEiJ_G0014501) #30	Pdzd7 (MGP_PahariEiJ_G0014500) #31	MGP_PahariEiJ_G0014499 #32	Twnk (MGP_PahariEiJ_G0014498) #33	Mrpl43 (MGP_PahariEiJ_G0014497) #35	Sema4g (MGP_PahariEiJ_G0014496) #37	Slf2 (MGP_PahariEiJ_G0014495)	Pax2 (MGP_PahariEiJ_G0014494)	Hif1an (MGP_PahariEiJ_G0014493)
Rat	MODERN SPECIES		Fbxl15 (ENSRNOG00000019509)	Psd (ENSRNOG00000019435)	Nfkb2 (ENSRNOG00000019311) #7	Gbf1 (ENSRNOG00000026048) #8	Pitx3 (ENSRNOG00000019194) #9	Elovl3 (ENSRNOG00000019124) #10	Nolc1 (ENSRNOG00000018704) #12	Pprc1 (ENSRNOG00000018561) #13	Ldb1 (ENSRNOG00000018468) #14	Hps6 (ENSRNOG00000018433) #15	Armh3 (ENSRNOG00000025523) #17	Kcnip2 (ENSRNOG00000018018) #18	Oga (ENSRNOG00000017822) #19	Npm3 (ENSRNOG00000017622) #20	Fgf8 (ENSRNOG00000017524) #21	Fbxw4 (ENSRNOG00000046211) #22	Dpcd (ENSRNOG00000017241) #23	Poll (ENSRNOG00000016748) #24	Btrc (ENSRNOG00000016280) #25	Lbx1 (ENSRNOG00000025520) #26	Tlx1 (ENSRNOG00000016120) #28	Kazald1 (ENSRNOG00000016058) #29	Sfxn3 (ENSRNOG00000015442) #30	Pdzd7 (ENSRNOG00000032946) #31	Lzts2 (ENSRNOG00000014969) #32	Twnk (ENSRNOG00000014935) #33	Mrpl43 (ENSRNOG00000014890) #35	Sema4g (ENSRNOG00000014650) #37	AC121209.1 (ENSRNOG00000036588)	Slf2 (ENSRNOG00000014482)	Pax2 (ENSRNOG00000014253)
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Northern American deer mouse	MODERN SPECIES		Fbxl15 (ENSPEMG00000012550)	Psd (ENSPEMG00000010757)	Nfkb2 (ENSPEMG00000014947) #7	Gbf1 (ENSPEMG00000018772) #8	Pitx3 (ENSPEMG00000026373) #9	Elovl3 (ENSPEMG00000000778) #10	ENSPEMG00000026626	Pprc1 (ENSPEMG00000016590) #13	Ldb1 (ENSPEMG00000011489) #14	Hps6 (ENSPEMG00000003992) #15	Armh3 (ENSPEMG00000014466) #17	Kcnip2 (ENSPEMG00000015045) #18	Oga (ENSPEMG00000008883) #19	Npm3 (ENSPEMG00000007731) #20	Fgf8 (ENSPEMG00000012905) #21	Fbxw4 (ENSPEMG00000024901) #22	Dpcd (ENSPEMG00000014479) #23	Poll (ENSPEMG00000006876) #24	Btrc (ENSPEMG00000014260) #25	Lbx1 (ENSPEMG00000026119) #26	Tlx1 (ENSPEMG00000016966) #28	Kazald1 (ENSPEMG00000018686) #29	Sfxn3 (ENSPEMG00000012869) #30	ENSPEMG00000030678	Pdzd7 (ENSPEMG00000004000) #31	Lzts2 (ENSPEMG00000013419) #32	Twnk (ENSPEMG00000013921) #33	Mrpl43 (ENSPEMG00000001510) #35	Sema4g (ENSPEMG00000010019) #37	Slf2 (ENSPEMG00000018671)	Pax2 (ENSPEMG00000007884)
Prairie vole	MODERN SPECIES	16	Psd (ENSMOCG00000014904)	Nfkb2 (ENSMOCG00000011590) #7	Gbf1 (ENSMOCG00000022834) #8	Pitx3 (ENSMOCG00000012980) #9	Elovl3 (ENSMOCG00000022790) #10	Nolc1 (ENSMOCG00000015232) #12	ENSMOCG00000018283 #13	ENSMOCG00000014044 #13	ENSMOCG00000004202 #14	Hps6 (ENSMOCG00000001347) #15	Armh3 (ENSMOCG00000011932) #17	Kcnip2 (ENSMOCG00000022254) #18	Oga (ENSMOCG00000014392) #19	Npm3 (ENSMOCG00000013601) #20	Fgf8 (ENSMOCG00000021407) #21	Fbxw4 (ENSMOCG00000013178) #22	Dpcd (ENSMOCG00000013756) #23	Poll (ENSMOCG00000006566) #24	Btrc (ENSMOCG00000002451) #25	Lbx1 (ENSMOCG00000018337) #26	Tlx1 (ENSMOCG00000017096) #28	Kazald1 (ENSMOCG00000015994) #29	Sfxn3 (ENSMOCG00000022608) #30	ENSMOCG00000019069 #31	ENSMOCG00000014095 #31	Lzts2 (ENSMOCG00000012162) #32	Twnk (ENSMOCG00000004167) #33	Mrpl43 (ENSMOCG00000008602) #35	Sema4g (ENSMOCG00000004639) #37	ENSMOCG00000015291	Slf2 (ENSMOCG00000019122)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Chinese hamster chok1gshd	MODERN SPECIES	215	Cuedc2 (ENSCGRG00001022970)	Psd (ENSCGRG00001000373)	Nfkb2 (ENSCGRG00001009030) #7	Gbf1 (ENSCGRG00001022494) #8	Pitx3 (ENSCGRG00001024147) #9	ELOVL3 (ENSCGRG00001005008) #10	Nolc1 (ENSCGRG00001009806) #12	Pprc1 (ENSCGRG00001011726) #13	Ldb1 (ENSCGRG00001020743) #14	Hps6 (ENSCGRG00001010957) #15	Armh3 (ENSCGRG00001015570) #17	Kcnip2 (ENSCGRG00001019478) #18	Oga (ENSCGRG00001020553) #19	Npm3 (ENSCGRG00001013345) #20	Fgf8 (ENSCGRG00001015246) #21	Fbxw4 (ENSCGRG00001003996) #22	Dpcd (ENSCGRG00001005917) #23	Poll (ENSCGRG00001010513) #24	Btrc (ENSCGRG00001015459) #25	Lbx1 (ENSCGRG00001017540) #26	Tlx1 (ENSCGRG00001021053) #28	Kazald1 (ENSCGRG00001000227) #29	Sfxn3 (ENSCGRG00001015591) #30	Pdzd7 (ENSCGRG00001017672) #31	Lzts2 (ENSCGRG00001023049) #32	Twnk (ENSCGRG00001000710) #33	Mrpl43 (ENSCGRG00001003475) #35	Sema4g (ENSCGRG00001007429) #37	Slf2 (ENSCGRG00001014230)	Pax2 (ENSCGRG00001019089)	Hif1an (ENSCGRG00001019981)
Golden Hamster	MODERN SPECIES	617	Psd (ENSMAUG00000017086)	Nfkb2 (ENSMAUG00000016292) #7	ENSMAUG00000017130 #8	ENSMAUG00000017791 #8	Pitx3 (ENSMAUG00000015434) #9	Elovl3 (ENSMAUG00000013792) #10	Pprc1 (ENSMAUG00000016674) #13	Ldb1 (ENSMAUG00000018515) #14	Hps6 (ENSMAUG00000002039) #15	Armh3 (ENSMAUG00000019449) #17	Kcnip2 (ENSMAUG00000019652) #18	Oga (ENSMAUG00000015052) #19	Npm3 (ENSMAUG00000015218) #20	Fgf8 (ENSMAUG00000016383) #21	ENSMAUG00000015569	ENSMAUG00000015787 #22	Dpcd (ENSMAUG00000017884) #23	Poll (ENSMAUG00000014674) #24	Btrc (ENSMAUG00000016001) #25	Lbx1 (ENSMAUG00000015198) #26	Tlx1 (ENSMAUG00000015538) #28	Kazald1 (ENSMAUG00000017475) #29	Sfxn3 (ENSMAUG00000017975) #30	ENSMAUG00000015875 #31	Lzts2 (ENSMAUG00000018041) #32	Twnk (ENSMAUG00000015403) #33	Mrpl43 (ENSMAUG00000015594) #35	Sema4g (ENSMAUG00000016054) #37	Slf2 (ENSMAUG00000017620)	Pax2 (ENSMAUG00000015931)	Hif1an (ENSMAUG00000019619)
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Long-tailed chinchilla	MODERN SPECIES	192	CUEDC2 (ENSCLAG00000001551)	FBXL15 (ENSCLAG00000001578)	PSD (ENSCLAG00000003741)	NFKB2 (ENSCLAG00000004104) #7	GBF1 (ENSCLAG00000004338) #8	PITX3 (ENSCLAG00000005073) #9	ELOVL3 (ENSCLAG00000005342) #10	NOLC1 (ENSCLAG00000001046) #12	PPRC1 (ENSCLAG00000001364) #13	LDB1 (ENSCLAG00000001555) #14	HPS6 (ENSCLAG00000001624) #15	ARMH3 (ENSCLAG00000001673) #17	KCNIP2 (ENSCLAG00000000954) #18	OGA (ENSCLAG00000001003) #19	FGF8 (ENSCLAG00000001075) #21	FBXW4 (ENSCLAG00000001132) #22	DPCD (ENSCLAG00000001147) #23	POLL (ENSCLAG00000001165) #24	BTRC (ENSCLAG00000001243) #25	LBX1 (ENSCLAG00000001298) #26	ENSCLAG00000001309 #28	ENSCLAG00000001318 #29	SFXN3 (ENSCLAG00000001996) #30	PDZD7 (ENSCLAG00000003178) #31	LZTS2 (ENSCLAG00000003292) #32	TWNK (ENSCLAG00000003486) #33	MRPL43 (ENSCLAG00000003510) #35	SEMA4G (ENSCLAG00000003839) #37	SLF2 (ENSCLAG00000003936)	PAX2 (ENSCLAG00000007272)	HIF1AN (ENSCLAG00000008195)
Degu	MODERN SPECIES	83	PITX3 (ENSODEG00000007162) #9	ELOVL3 (ENSODEG00000006606) #10	NOLC1 (ENSODEG00000006304) #12	ENSODEG00000006985 #13	ENSODEG00000009568 #13	LDB1 (ENSODEG00000009090) #14	HPS6 (ENSODEG00000007638) #15	ENSODEG00000019424	ARMH3 (ENSODEG00000007299) #17	ENSODEG00000010569	KCNIP2 (ENSODEG00000007199) #18	ENSODEG00000019634	OGA (ENSODEG00000008001) #19	NPM3 (ENSODEG00000006704) #20	FGF8 (ENSODEG00000006423) #21	FBXW4 (ENSODEG00000007897) #22	DPCD (ENSODEG00000005983) #23	POLL (ENSODEG00000007469) #24	BTRC (ENSODEG00000008464) #25	LBX1 (ENSODEG00000006684) #26	ENSODEG00000006094 #28	KAZALD1 (ENSODEG00000005804) #29	SFXN3 (ENSODEG00000007542) #30	PDZD7 (ENSODEG00000006718) #31	LZTS2 (ENSODEG00000006752) #32	TWNK (ENSODEG00000006072) #33	ENSODEG00000006668 #35	SEMA4G (ENSODEG00000005984) #37	SLF2 (ENSODEG00000008647)	PAX2 (ENSODEG00000006975)	ENSODEG00000007007
Guinea pig	MODERN SPECIES	11	FBXL15 (ENSCPOG00000021451)	PSD (ENSCPOG00000000156)	NFKB2 (ENSCPOG00000004847) #7	GBF1 (ENSCPOG00000004514) #8	PITX3 (ENSCPOG00000036365) #9	ELOVL3 (ENSCPOG00000014884) #10	NOLC1 (ENSCPOG00000004504) #12	PPRC1 (ENSCPOG00000032149) #13	LDB1 (ENSCPOG00000010311) #14	HPS6 (ENSCPOG00000006084) #15	ARMH3 (ENSCPOG00000031847) #17	KCNIP2 (ENSCPOG00000011918) #18	OGA (ENSCPOG00000000219) #19	NPM3 (ENSCPOG00000006301) #20	FGF8 (ENSCPOG00000021533) #21	ENSCPOG00000032448 #22	DPCD (ENSCPOG00000005499) #23	POLL (ENSCPOG00000005493) #24	BTRC (ENSCPOG00000005488) #25	LBX1 (ENSCPOG00000025830) #26	TLX1 (ENSCPOG00000003194) #28	KAZALD1 (ENSCPOG00000015270) #29	SFXN3 (ENSCPOG00000000955) #30	ENSCPOG00000000952 #31	LZTS2 (ENSCPOG00000035545) #32	TWNK (ENSCPOG00000000950) #33	MRPL43 (ENSCPOG00000040768) #35	SEMA4G (ENSCPOG00000036564) #37	SLF2 (ENSCPOG00000000940)	PAX2 (ENSCPOG00000000939)	HIF1AN (ENSCPOG00000009881)
Naked mole-rat female	MODERN SPECIES	4	GBF1 (ENSHGLG00000002115) #8	ENSHGLG00000042455 #8	PITX3 (ENSHGLG00000001851) #9	ELOVL3 (ENSHGLG00000003511) #10	ENSHGLG00000049553	NOLC1 (ENSHGLG00000003156) #12	PPRC1 (ENSHGLG00000002783) #13	LDB1 (ENSHGLG00000002254) #14	HPS6 (ENSHGLG00000020621) #15	ARMH3 (ENSHGLG00000002014) #17	ENSHGLG00000043110 #17	KCNIP2 (ENSHGLG00000019185) #18	OGA (ENSHGLG00000019033) #19	NPM3 (ENSHGLG00000049984) #20	FGF8 (ENSHGLG00000013482) #21	FBXW4 (ENSHGLG00000018911) #22	DPCD (ENSHGLG00000019507) #23	POLL (ENSHGLG00000019504) #24	ENSHGLG00000002588 #25	ENSHGLG00000019498	LBX1 (ENSHGLG00000047414) #26	TLX1 (ENSHGLG00000001823) #28	KAZALD1 (ENSHGLG00000002854) #29	SFXN3 (ENSHGLG00000002107) #30	PDZD7 (ENSHGLG00000046047) #31	ENSHGLG00000035111 #31	LZTS2 (ENSHGLG00000039393) #32	ENSHGLG00000002240 #33	ENSHGLG00000040204 #35	SLF2 (ENSHGLG00000011302)	ENSHGLG00000033080
Sciuridae	ANCESTRAL SPECIES	21	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Marmotini	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Marmotini_b	ANCESTRAL SPECIES	76	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.b #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409.e
Squirrel	MODERN SPECIES	200	PSD (ENSSTOG00000021577)	NFKB2 (ENSSTOG00000002191) #7	GBF1 (ENSSTOG00000002171) #8	PITX3 (ENSSTOG00000015025) #9	ELOVL3 (ENSSTOG00000015013) #10	NOLC1 (ENSSTOG00000002168) #12	ENSSTOG00000002156 #13	ENSSTOG00000034359 #13	LDB1 (ENSSTOG00000002139) #14	HPS6 (ENSSTOG00000024918) #15	ARMH3 (ENSSTOG00000015633) #17	KCNIP2 (ENSSTOG00000021030) #18	ENSSTOG00000032901 #19	NPM3 (ENSSTOG00000022621) #20	FGF8 (ENSSTOG00000023351) #21	FBXW4 (ENSSTOG00000011495) #22	DPCD (ENSSTOG00000011490) #23	POLL (ENSSTOG00000011485) #24	BTRC (ENSSTOG00000022481) #25	LBX1 (ENSSTOG00000006491) #26	ENSSTOG00000023842 #28	KAZALD1 (ENSSTOG00000015240) #29	SFXN3 (ENSSTOG00000026614) #30	PDZD7 (ENSSTOG00000009046) #31	LZTS2 (ENSSTOG00000015232) #32	TWNK (ENSSTOG00000009030) #33	MRPL43 (ENSSTOG00000009016) #35	SEMA4G (ENSSTOG00000008994) #37	SLF2 (ENSSTOG00000008951)	PAX2 (ENSSTOG00000011575)	ENSSTOG00000009302
Arctic ground squirrel	MODERN SPECIES	373							NOLC1 (ENSUPAG00010009783) #12	PPRC1 (ENSUPAG00010009814) #13	ENSUPAG00010009826 #14	HPS6 (ENSUPAG00010009845) #15	ARMH3 (ENSUPAG00010009848) #17	KCNIP2 (ENSUPAG00010009866) #18	OGA (ENSUPAG00010010052) #19	NPM3 (ENSUPAG00010010073) #20	FGF8 (ENSUPAG00010010083) #21	FBXW4 (ENSUPAG00010010202) #22	DPCD (ENSUPAG00010010220) #23	POLL (ENSUPAG00010010241) #24	BTRC (ENSUPAG00010010245) #25	ENSUPAG00010010321	LBX1 (ENSUPAG00010010328) #26	TLX1 (ENSUPAG00010010336) #28	KAZALD1 (ENSUPAG00010010340) #29	SFXN3 (ENSUPAG00010010359) #30	ENSUPAG00010010444 #31	ENSUPAG00010010561 #31	LZTS2 (ENSUPAG00010010572) #32	TWNK (ENSUPAG00010010588) #33	MRPL43 (ENSUPAG00010010598) #35	SEMA4G (ENSUPAG00010010602) #37	SLF2 (ENSUPAG00010010631)
Alpin marmot	MODERN SPECIES	39	ENSMMMG00000023315	ENSMMMG00000023312	NFKB2 (ENSMMMG00000023297) #7	GBF1 (ENSMMMG00000023283) #8	PITX3 (ENSMMMG00000023281) #9	ELOVL3 (ENSMMMG00000023279) #10	NOLC1 (ENSMMMG00000023274) #12	PPRC1 (ENSMMMG00000023259) #13	LDB1 (ENSMMMG00000023248) #14	HPS6 (ENSMMMG00000023243) #15	ARMH3 (ENSMMMG00000023233) #17	KCNIP2 (ENSMMMG00000023225) #18	OGA (ENSMMMG00000023220) #19	NPM3 (ENSMMMG00000023217) #20	FGF8 (ENSMMMG00000023215) #21	FBXW4 (ENSMMMG00000023212) #22	DPCD (ENSMMMG00000023210) #23	POLL (ENSMMMG00000023200) #24	BTRC (ENSMMMG00000023182) #25	LBX1 (ENSMMMG00000023177) #26	ENSMMMG00000023172 #28	KAZALD1 (ENSMMMG00000023167) #29	SFXN3 (ENSMMMG00000023149) #30	ENSMMMG00000023146	ENSMMMG00000023144 #31	ENSMMMG00000023099 #31	ENSMMMG00000023095 #32	TWNK (ENSMMMG00000023092) #33	MRPL43 (ENSMMMG00000023087) #35	SEMA4G (ENSMMMG00000023078) #37	SLF2 (ENSMMMG00000023066)
Eurasian red squirrel	MODERN SPECIES	13	CUEDC2 (ENSSVLG00005004017)	FBXL15 (ENSSVLG00005004039)	PSD (ENSSVLG00005004064)	NFKB2 (ENSSVLG00005004099) #7	GBF1 (ENSSVLG00005004145) #8	PITX3 (ENSSVLG00005004181) #9	ELOVL3 (ENSSVLG00005004199) #10	NOLC1 (ENSSVLG00005004225) #12	PPRC1 (ENSSVLG00005004252) #13	LDB1 (ENSSVLG00005004323) #14	HPS6 (ENSSVLG00005004366) #15	ARMH3 (ENSSVLG00005004399) #17	KCNIP2 (ENSSVLG00005004570) #18	OGA (ENSSVLG00005004824) #19	FGF8 (ENSSVLG00005005038) #21	FBXW4 (ENSSVLG00005005056) #22	DPCD (ENSSVLG00005005104) #23	POLL (ENSSVLG00005005135) #24	BTRC (ENSSVLG00005005205) #25	LBX1 (ENSSVLG00005005245) #26	TLX1 (ENSSVLG00005005266) #28	KAZALD1 (ENSSVLG00005005289) #29	SFXN3 (ENSSVLG00005005315) #30	PDZD7 (ENSSVLG00005005347) #31	LZTS2 (ENSSVLG00005005380) #32	TWNK (ENSSVLG00005005412) #33	MRPL43 (ENSSVLG00005005460) #35	SEMA4G (ENSSVLG00005005503) #37	SLF2 (ENSSVLG00005005553)	PAX2 (ENSSVLG00005005719)	HIF1AN (ENSSVLG00005005917)
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092.a.a ##12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Rabbit	MODERN SPECIES	9	FBXL15 (ENSOCUG00000005764)	CUEDC2 (ENSOCUG00000023995)	PSD (ENSOCUG00000005751)	NFKB2 (ENSOCUG00000005735) #7	GBF1 (ENSOCUG00000005714) #8	PITX3 (ENSOCUG00000016065) #9	ELOVL3 (ENSOCUG00000016071) #10	ENSOCUG00000000516 ##12	PPRC1 (ENSOCUG00000000510) #13	LDB1 (ENSOCUG00000025582) #14	ARMH3 (ENSOCUG00000002776) #17	KCNIP2 (ENSOCUG00000026348) #18	OGA (ENSOCUG00000002768) #19	NPM3 (ENSOCUG00000016819) #20	ENSOCUG00000027864 #21	FBXW4 (ENSOCUG00000015386) #22	DPCD (ENSOCUG00000015373) #23	POLL (ENSOCUG00000015364) #24	BTRC (ENSOCUG00000015353) #25	LBX1 (ENSOCUG00000013145) #26	TLX1 (ENSOCUG00000013136) #28	KAZALD1 (ENSOCUG00000002974) #29	SFXN3 (ENSOCUG00000002751) #30	ENSOCUG00000031924 #31	ENSOCUG00000006651 #31	LZTS2 (ENSOCUG00000021502) #32	TWNK (ENSOCUG00000002746) #33	MRPL43 (ENSOCUG00000002742) #35	SEMA4G (ENSOCUG00000002737) #37	SLF2 (ENSOCUG00000002728)	PAX2 (ENSOCUG00000012860)
Pika	MODERN SPECIES	604																ENSOPRG00000007176 #22	DPCD (ENSOPRG00000007167) #23	POLL (ENSOPRG00000007162) #24	BTRC (ENSOPRG00000007146) #25	LBX1 (ENSOPRG00000007142) #26	TLX1 (ENSOPRG00000007137) #28	KAZALD1 (ENSOPRG00000007134) #29	ENSOPRG00000007119 #31	LZTS2 (ENSOPRG00000007108) #32	TWNK (ENSOPRG00000007100) #33	MRPL43 (ENSOPRG00000007093) #35	ENSOPRG00000007068 #37	SLF2 (ENSOPRG00000007048)
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Eulipotyphla	ANCESTRAL SPECIES	1283																ENSGT00390000005029 #22	ENSGT00390000014031 #23
Hedgehog	MODERN SPECIES	6057																FBXW4 (ENSEEUG00000004205) #22	DPCD (ENSEEUG00000004150) #23
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Carnivora	ANCESTRAL SPECIES	16	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Caniformia	ANCESTRAL SPECIES	13	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Dingo	MODERN SPECIES	165	FBXL15 (ENSCAFG00020010220)	PSD (ENSCAFG00020010215)	NFKB2 (ENSCAFG00020010204) #7	ENSCAFG00020010159 #8	ENSCAFG00020010157 #8	PITX3 (ENSCAFG00020010150) #9	ELOVL3 (ENSCAFG00020010148) #10	NOLC1 (ENSCAFG00020010146) #12	PPRC1 (ENSCAFG00020010030) #13	LDB1 (ENSCAFG00020010016) #14	ARMH3 (ENSCAFG00020009246) #17	KCNIP2 (ENSCAFG00020009192) #18	OGA (ENSCAFG00020009186) #19	NPM3 (ENSCAFG00020009185) #20	FGF8 (ENSCAFG00020009181) #21	FBXW4 (ENSCAFG00020009166) #22	DPCD (ENSCAFG00020009157) #23	POLL (ENSCAFG00020009154) #24	BTRC (ENSCAFG00020009146) #25	LBX1 (ENSCAFG00020009135) #26	TLX1 (ENSCAFG00020009130) #28	KAZALD1 (ENSCAFG00020009128) #29	SFXN3 (ENSCAFG00020009123) #30	ENSCAFG00020009067 #31	ENSCAFG00020009061 #31	LZTS2 (ENSCAFG00020009057) #32	TWNK (ENSCAFG00020009050) #33	MRPL43 (ENSCAFG00020009048) #35	SEMA4G (ENSCAFG00020009043) #37	SLF2 (ENSCAFG00020008672)	ENSCAFG00020008648
Dog	MODERN SPECIES	20	FBXL15 (ENSCAFG00845024340)	PSD (ENSCAFG00845023806)	NFKB2 (ENSCAFG00845023626) #7	GBF1 (ENSCAFG00845023390) #8	PITX3 (ENSCAFG00845023314) #9	ELOVL3 (ENSCAFG00845023260) #10	NOLC1 (ENSCAFG00845023156) #12	PPRC1 (ENSCAFG00845022994) #13	LDB1 (ENSCAFG00845022765) #14	HPS6 (ENSCAFG00845022716) #15	ARMH3 (ENSCAFG00845022019) #17	KCNIP2 (ENSCAFG00845021527) #18	OGA (ENSCAFG00845021307) #19	OGA (ENSCAFG00845021211) #20	FGF8 (ENSCAFG00845021086) #21	FBXW4 (ENSCAFG00845020929) #22	DPCD (ENSCAFG00845020872) #23	POLL (ENSCAFG00845020759) #24	BTRC (ENSCAFG00845020497) #25	LBX1 (ENSCAFG00845020416) #26	TLX1 (ENSCAFG00845020381) #28	KAZALD1 (ENSCAFG00845020241) #29	SFXN3 (ENSCAFG00845020173) #30	PDZD7 (ENSCAFG00845019707) #31	LZTS2 (ENSCAFG00845019571) #32	TWNK (ENSCAFG00845019518) #33	MRPL43 (ENSCAFG00845019486) #35	SEMA4G (ENSCAFG00845019254) #37	SLF2 (ENSCAFG00845018854)	PAX2 (ENSCAFG00845018449)	HIF1AN (ENSCAFG00845018163)
Red fox	MODERN SPECIES		FBXL15 (ENSVVUG00000003576)	PSD (ENSVVUG00000003561)	NFKB2 (ENSVVUG00000002942) #7	GBF1 (ENSVVUG00000002840) #8	PITX3 (ENSVVUG00000002824) #9	ELOVL3 (ENSVVUG00000002813) #10	NOLC1 (ENSVVUG00000002661) #12	LDB1 (ENSVVUG00000002609) #14	PPRC1 (ENSVVUG00000002566) #13	ENSVVUG00000002549	ARMH3 (ENSVVUG00000002381) #17	KCNIP2 (ENSVVUG00000001064) #18	OGA (ENSVVUG00000000965) #19	NPM3 (ENSVVUG00000000945) #20	FGF8 (ENSVVUG00000000784) #21	FBXW4 (ENSVVUG00000000770) #22	DPCD (ENSVVUG00000000749) #23	POLL (ENSVVUG00000000738) #24	BTRC (ENSVVUG00000000703) #25	LBX1 (ENSVVUG00000000689) #26	TLX1 (ENSVVUG00000000649) #28	KAZALD1 (ENSVVUG00000000631) #29	SFXN3 (ENSVVUG00000000615) #30	PDZD7 (ENSVVUG00000000597) #31	LZTS2 (ENSVVUG00000000572) #32	TWNK (ENSVVUG00000000429) #33	MRPL43 (ENSVVUG00000000360) #35	SEMA4G (ENSVVUG00000000341) #37	SLF2 (ENSVVUG00000000268)	ENSVVUG00000000159	ENSVVUG00000024932
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
American mink	MODERN SPECIES	25	PSD (ENSNVIG00000017477)	NFKB2 (ENSNVIG00000017504) #7	GBF1 (ENSNVIG00000017606) #8	PITX3 (ENSNVIG00000017782) #9	ELOV3 (ENSNVIG00000017791) #10	NOLC1 (ENSNVIG00000017826) #12	PPRC1 (ENSNVIG00000017896) #13	LDB1 (ENSNVIG00000017913) #14	HPS6 (ENSNVIG00000017937) #15	CJ076 (ENSNVIG00000017939) #17	ENSNVIG00000018006	KCIP2 (ENSNVIG00000018034) #18	OGA (ENSNVIG00000018264) #19	NPM3 (ENSNVIG00000018364) #20	FGF8 (ENSNVIG00000018394) #21	FBXW4 (ENSNVIG00000018442) #22	DPCD (ENSNVIG00000018457) #23	POLL (ENSNVIG00000018469) #24	ENSNVIG00000018498 #25	LBX1 (ENSNVIG00000018557) #26	ENSNVIG00000018563	TLX1 (ENSNVIG00000018572) #28	KAZALD1 (ENSNVIG00000018579) #29	SFXN3 (ENSNVIG00000018587) #30	ENSNVIG00000018594 #31	LZTS2 (ENSNVIG00000018615) #32	TWNK (ENSNVIG00000018632) #33	B1AL05 (ENSNVIG00000018655) #35	SEMA4G (ENSNVIG00000018660) #37	SLF2 (ENSNVIG00000018711)	PAX2 (ENSNVIG00000018769)
Ferret	MODERN SPECIES	187	ENSMPUG00000016874	PSD (ENSMPUG00000016879)	NFKB2 (ENSMPUG00000016882) #7	GBF1 (ENSMPUG00000016883) #8	PITX3 (ENSMPUG00000016885) #9	ELOVL3 (ENSMPUG00000016886) #10	NOLC1 (ENSMPUG00000016887) #12	PPRC1 (ENSMPUG00000016888) #13	LDB1 (ENSMPUG00000016889) #14	HPS6 (ENSMPUG00000020133) #15	ARMH3 (ENSMPUG00000016890) #17	KCNIP2 (ENSMPUG00000016892) #18	OGA (ENSMPUG00000016893) #19	NPM3 (ENSMPUG00000016894) #20	FGF8 (ENSMPUG00000016897) #21	FBXW4 (ENSMPUG00000016906) #22	DPCD (ENSMPUG00000016919) #23	POLL (ENSMPUG00000016920) #24	BTRC (ENSMPUG00000016923) #25	LBX1 (ENSMPUG00000016926) #26	TLX1 (ENSMPUG00000016927) #28	KAZALD1 (ENSMPUG00000016929) #29	SFXN3 (ENSMPUG00000016930) #30	PDZD7 (ENSMPUG00000016931) #31	LZTS2 (ENSMPUG00000016937) #32	TWNK (ENSMPUG00000016941) #33	MRPL43 (ENSMPUG00000016942) #35	SEMA4G (ENSMPUG00000016946) #37	SLF2 (ENSMPUG00000016953)	ENSMPUG00000016954	PAX2 (ENSMPUG00000016955)
Ursidae	ANCESTRAL SPECIES	5	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Giant Panda	MODERN SPECIES	16	PSD (ENSAMEG00000017765)	NFKB2 (ENSAMEG00000017735) #7	ENSAMEG00000028274	GBF1 (ENSAMEG00000017700) #8	PITX3 (ENSAMEG00000017698) #9	ELOVL3 (ENSAMEG00000026429) #10	NOLC1 (ENSAMEG00000017687) #12	PPRC1 (ENSAMEG00000017685) #13	LDB1 (ENSAMEG00000017674) #14	HPS6 (ENSAMEG00000020223) #15	ARMH3 (ENSAMEG00000017666) #17	KCNIP2 (ENSAMEG00000017648) #18	OGA (ENSAMEG00000017642) #19	ENSAMEG00000017639 #20	FGF8 (ENSAMEG00000017635) #21	FBXW4 (ENSAMEG00000017630) #22	DPCD (ENSAMEG00000017626) #23	POLL (ENSAMEG00000017616) #24	BTRC (ENSAMEG00000017610) #25	LBX1 (ENSAMEG00000025161) #26	TLX1 (ENSAMEG00000017604) #28	KAZALD1 (ENSAMEG00000017599) #29	SFXN3 (ENSAMEG00000017589) #30	PDZD7 (ENSAMEG00000017588) #31	LZTS2 (ENSAMEG00000017581) #32	TWNK (ENSAMEG00000017575) #33	ENSAMEG00000026650	SEMA4G (ENSAMEG00000017555) #37	SLF2 (ENSAMEG00000017539)	PAX2 (ENSAMEG00000017523)	NDUFB8 (ENSAMEG00000006651)
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
American black bear	MODERN SPECIES	170													ENSUAMG00000023912 #17	OGA (ENSUAMG00000023914) #19	NPM3 (ENSUAMG00000024072) #20	FBXW4 (ENSUAMG00000024073) #22	DPCD (ENSUAMG00000024074) #23	POLL (ENSUAMG00000024075) #24	BTRC (ENSUAMG00000024076) #25	LBX1 (ENSUAMG00000024077) #26	TLX1 (ENSUAMG00000024078) #28	KAZALD1 (ENSUAMG00000024080) #29
Polar bear	MODERN SPECIES	92	ENSUMAG00000023438	CUEDC2 (ENSUMAG00000023434)	PSD (ENSUMAG00000023417)	NFKB2 (ENSUMAG00000023323) #7	GBF1 (ENSUMAG00000023098) #8	ELOVL3 (ENSUMAG00000023071) #10	NOLC1 (ENSUMAG00000023063) #12	PPRC1 (ENSUMAG00000023041) #13	LDB1 (ENSUMAG00000023036) #14	HPS6 (ENSUMAG00000023035) #15	ENSUMAG00000023033	ARMH3 (ENSUMAG00000023027) #17	KCNIP2 (ENSUMAG00000023021) #18	OGA (ENSUMAG00000023018) #19	NPM3 (ENSUMAG00000023016) #20	FBXW4 (ENSUMAG00000023013) #22	DPCD (ENSUMAG00000023012) #23	POLL (ENSUMAG00000023008) #24	BTRC (ENSUMAG00000023002) #25	SFXN3 (ENSUMAG00000022989) #30	ENSUMAG00000022970 #31	ENSUMAG00000022963 #31	TWNK (ENSUMAG00000022959) #33	MRPL43 (ENSUMAG00000022958) #35	ENSUMAG00000022956 #37	SLF2 (ENSUMAG00000022840)	PAX2 (ENSUMAG00000022813)	HIF1AN (ENSUMAG00000022811)	NDUFB8 (ENSUMAG00000022810)	SEC31B (ENSUMAG00000022806)	SCD (ENSUMAG00000022802)
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Cat	MODERN SPECIES	242	CD2H10orf95 (ENSFCAG00000042728)	CUEDC2 (ENSFCAG00000001245)	FBXL15 (ENSFCAG00000001244)	PSD (ENSFCAG00000001243)	NFKB2 (ENSFCAG00000001242) #7	PITX3 (ENSFCAG00000026758) #9	GBF1 (ENSFCAG00000001241) #8	PPRC1 (ENSFCAG00000001238) #13	LDB1 (ENSFCAG00000001236) #14	HPS6 (ENSFCAG00000028998) #15	ARMH3 (ENSFCAG00000013244) #17	KCNIP2 (ENSFCAG00000013243) #18	OGA (ENSFCAG00000007179) #19	NPM3 (ENSFCAG00000007178) #20	FGF8 (ENSFCAG00000007177) #21	FBXW4 (ENSFCAG00000015703) #22	DPCD (ENSFCAG00000037081) #23	POLL (ENSFCAG00000015701) #24	BTRC (ENSFCAG00000015700) #25	LBX1 (ENSFCAG00000034106) #26	TLX1 (ENSFCAG00000046742) #28	KAZALD1 (ENSFCAG00000038365) #29	SFXN3 (ENSFCAG00000015697) #30	PDZD7 (ENSFCAG00000015696) #31	LZTS2 (ENSFCAG00000015695) #32	TWNK (ENSFCAG00000015694) #33	ENSFCAG00000015693	SEMA4G (ENSFCAG00000015692) #37	SLF2 (ENSFCAG00000030202)	PAX2 (ENSFCAG00000011602)	HIF1AN (ENSFCAG00000024883)
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
leopard	MODERN SPECIES	33	CUEDC2 (ENSPPRG00000012133)	FBXL15 (ENSPPRG00000012372)	PSD (ENSPPRG00000016125)	NFKB2 (ENSPPRG00000024177) #7	GBF1 (ENSPPRG00000022832) #8	PITX3 (ENSPPRG00000000459) #9	ELOVL3 (ENSPPRG00000000726) #10	NOLC1 (ENSPPRG00000003072) #12	PPRC1 (ENSPPRG00000004274) #13	LDB1 (ENSPPRG00000004903) #14	ARMH3 (ENSPPRG00000006816) #17	KCNIP2 (ENSPPRG00000008687) #18	OGA (ENSPPRG00000012421) #19	ENSPPRG00000012611 #20	FGF8 (ENSPPRG00000013495) #21	FBXW4 (ENSPPRG00000014010) #22	DPCD (ENSPPRG00000014395) #23	POLL (ENSPPRG00000015944) #24	BTRC (ENSPPRG00000019213) #25	LBX1 (ENSPPRG00000019906) #26	TLX1 (ENSPPRG00000021686) #28	KAZALD1 (ENSPPRG00000025091) #29	SFXN3 (ENSPPRG00000025064) #30	PDZD7 (ENSPPRG00000024966) #31	LZTS2 (ENSPPRG00000024851) #32	TWNK (ENSPPRG00000024792) #33	MRPL43 (ENSPPRG00000024398) #35	SEMA4G (ENSPPRG00000023921) #37	SLF2 (ENSPPRG00000023640)	PAX2 (ENSPPRG00000022822)	HIF1AN (ENSPPRG00000022659)
lion	MODERN SPECIES	11	PSD (ENSPLOG00000017905)	NFKB2 (ENSPLOG00000018109) #7	GBF1 (ENSPLOG00000018201) #8	PITX3 (ENSPLOG00000018227) #9	ELOVL3 (ENSPLOG00000018268) #10	NOLC1 (ENSPLOG00000018322) #12	PPRC1 (ENSPLOG00000018611) #13	LDB1 (ENSPLOG00000018677) #14	HPS6 (ENSPLOG00000018787) #15	ARMH3 (ENSPLOG00000018843) #17	ENSPLOG00000019012	KCNIP2 (ENSPLOG00000004987) #18	OGA (ENSPLOG00000005085) #19	NPM3 (ENSPLOG00000005157) #20	FGF8 (ENSPLOG00000005187) #21	FBXW4 (ENSPLOG00000005224) #22	DPCD (ENSPLOG00000005244) #23	POLL (ENSPLOG00000005264) #24	BTRC (ENSPLOG00000005315) #25	LBX1 (ENSPLOG00000005507) #26	TLX1 (ENSPLOG00000005518) #28	KAZALD1 (ENSPLOG00000005533) #29	SFXN3 (ENSPLOG00000005555) #30	ENSPLOG00000005593 #31	LZTS2 (ENSPLOG00000005627) #32	TWNK (ENSPLOG00000005651) #33	ENSPLOG00000005682	SEMA4G (ENSPLOG00000005704) #37	SLF2 (ENSPLOG00000005756)	PAX2 (ENSPLOG00000005810)	HIF1AN (ENSPLOG00000005929)
Tiger	MODERN SPECIES	136	ACTR1A (ENSPTIG00000019111)	MFSD13A (ENSPTIG00000018951)	CUEDC2 (ENSPTIG00000018568)	PSD (ENSPTIG00000018116)	ENSPTIG00000017841 #7	GBF1 (ENSPTIG00000017555) #8	ENSPTIG00000017198 #9	ELOVL3 (ENSPTIG00000016855) #10	NOLC1 (ENSPTIG00000014862) #12	PPRC1 (ENSPTIG00000013709) #13	LDB1 (ENSPTIG00000012571) #14	ARMH3 (ENSPTIG00000010893) #17	KCNIP2 (ENSPTIG00000009209) #18	OGA (ENSPTIG00000005989) #19	NPM3 (ENSPTIG00000005390) #20	FBXW4 (ENSPTIG00000004575) #22	DPCD (ENSPTIG00000000972) #23	POLL (ENSPTIG00000021663) #24	BTRC (ENSPTIG00000021271) #25	LBX1 (ENSPTIG00000020484) #26	SFXN3 (ENSPTIG00000020192) #30	ENSPTIG00000019929 #31	TWNK (ENSPTIG00000019662) #33	MRPL43 (ENSPTIG00000019483) #35	SEMA4G (ENSPTIG00000018207) #37	SLF2 (ENSPTIG00000017770)	PAX2 (ENSPTIG00000015726)	HIF1AN (ENSPTIG00000014946)	NDUFB8 (ENSPTIG00000013500)	SEC31B (ENSPTIG00000012634)	SCD (ENSPTIG00000012317)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Equus	ANCESTRAL SPECIES	9	ENSGT00940000160968 #7	ENSGT00940000156925.l #8	ENSGT01050000244965.a.d #10	ENSGT00940000156925.k #8	ENSGT00940000161801 #9	ENSGT01050000244965.a.c #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Donkey	MODERN SPECIES	11	ENSEASG00005038682 #9	ENSEASG00005037872 #10	ENSEASG00005030491 #9	ENSEASG00005037516 #10	ENSEASG00005034292 #9	ENSEASG00005010383 #10	NOLC1 (ENSEASG00005007519) #12	PPRC1 (ENSEASG00005007583) #13	LDB1 (ENSEASG00005007592) #14	HPS6 (ENSEASG00005033362) #15	ARMH3 (ENSEASG00005007687) #17	KCNIP2 (ENSEASG00005007921) #18	OGA (ENSEASG00005008004) #19	NPM3 (ENSEASG00005008834) #20	FGF8 (ENSEASG00005008843) #21	FBXW4 (ENSEASG00005008860) #22	DPCD (ENSEASG00005008874) #23	POLL (ENSEASG00005008879) #24	BTRC (ENSEASG00005008887) #25	LBX1 (ENSEASG00005034916) #26	TLX1 (ENSEASG00005008902) #28	KAZALD1 (ENSEASG00005008906) #29	SFXN3 (ENSEASG00005008915) #30	PDZD7 (ENSEASG00005038524) #31	LZTS2 (ENSEASG00005008920) #32	TWNK (ENSEASG00005008922) #33	MRPL43 (ENSEASG00005008925) #35	ENSEASG00005030511	SEMA4G (ENSEASG00005008933) #37	SLF2 (ENSEASG00005008951)	PAX2 (ENSEASG00005008965)
Horse	MODERN SPECIES		PSD (ENSECAG00000007172)	FBXL15 (ENSECAG00000000576)	NFKB2 (ENSECAG00000019593) #7	GBF1 (ENSECAG00000023593) #8	ENSECAG00000047204 #8	PITX3 (ENSECAG00000022294) #9	ELOVL3 (ENSECAG00000023578) #10	NOLC1 (ENSECAG00000052236) #12	PPRC1 (ENSECAG00000009482) #13	LDB1 (ENSECAG00000012948) #14	HPS6 (ENSECAG00000004595) #15	ARMH3 (ENSECAG00000020347) #17	OGA (ENSECAG00000018731) #19	NPM3 (ENSECAG00000007524) #20	FGF8 (ENSECAG00000037372) #21	FBXW4 (ENSECAG00000020477) #22	DPCD (ENSECAG00000009848) #23	POLL (ENSECAG00000015282) #24	BTRC (ENSECAG00000022888) #25	LBX1 (ENSECAG00000032593) #26	TLX1 (ENSECAG00000013342) #28	KAZALD1 (ENSECAG00000013608) #29	SFXN3 (ENSECAG00000019285) #30	PDZD7 (ENSECAG00000012183) #31	LZTS2 (ENSECAG00000013288) #32	TWNK (ENSECAG00000017734) #33	MRPL43 (ENSECAG00000038363) #35	SEMA4G (ENSECAG00000022499) #37	SLF2 (ENSECAG00000011200)	PAX2 (ENSECAG00000021123)	HIF1AN (ENSECAG00000009178)
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Megabat	MODERN SPECIES	2006																FBXW4 (ENSPVAG00000006480) #22	DPCD (ENSPVAG00000006479) #23	POLL (ENSPVAG00000006478) #24	BTRC (ENSPVAG00000006474) #25
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00990000203892	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Greater horseshoe bat	MODERN SPECIES	7	PSD (ENSRFEG00010017833)	NFKB2 (ENSRFEG00010017892) #7	GBF1 (ENSRFEG00010017963) #8	PITX3 (ENSRFEG00010018052) #9	ELOVL3 (ENSRFEG00010018094) #10	NOLC1 (ENSRFEG00010018127) #12	PPRC1 (ENSRFEG00010018145) #13	LDB1 (ENSRFEG00010018232) #14	HPS6 (ENSRFEG00010018300) #15	ARMH3 (ENSRFEG00010005361) #17	ENSRFEG00010005540	KCNIP2 (ENSRFEG00010005717) #18	OGA (ENSRFEG00010005973) #19	NPM3 (ENSRFEG00010006055) #20	FGF8 (ENSRFEG00010006132) #21	FBXW4 (ENSRFEG00010006255) #22	DPCD (ENSRFEG00010006295) #23	POLL (ENSRFEG00010006332) #24	BTRC (ENSRFEG00010006446) #25	ENSRFEG00010006625	LBX1 (ENSRFEG00010006637) #26	ENSRFEG00010006650	TLX1 (ENSRFEG00010006681) #28	KAZALD1 (ENSRFEG00010006705) #29	SFXN3 (ENSRFEG00010006745) #30	PDZD7 (ENSRFEG00010006815) #31	ENSRFEG00010006849	LZTS2 (ENSRFEG00010006867) #32	TWNK (ENSRFEG00010006903) #33	MRPL43 (ENSRFEG00010006991) #35	SEMA4G (ENSRFEG00010007019) #37
Microbat	MODERN SPECIES	1099	FBXL15 (ENSMLUG00000006312)	PSD (ENSMLUG00000006298)	NFKB2 (ENSMLUG00000006287) #7	GBF1 (ENSMLUG00000006247) #8	ENSMLUG00000028577	PITX3 (ENSMLUG00000023193) #9	ELOVL3 (ENSMLUG00000028990) #10	NOLC1 (ENSMLUG00000001726) #12	PPRC1 (ENSMLUG00000006217) #13	LDB1 (ENSMLUG00000009237) #14	ARMH3 (ENSMLUG00000004996) #17	KCNIP2 (ENSMLUG00000004987) #18	OGA (ENSMLUG00000004970) #19	NPM3 (ENSMLUG00000004961) #20	FGF8 (ENSMLUG00000004959) #21	FBXW4 (ENSMLUG00000004952) #22	DPCD (ENSMLUG00000004947) #23	POLL (ENSMLUG00000004944) #24	BTRC (ENSMLUG00000004932) #25
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Suina	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Pig	MODERN SPECIES	5	FBXL15 (ENSSSCG00000038504)	PSD (ENSSSCG00000010581)	NFKB2 (ENSSSCG00000010580) #7	ENSSSCG00000054273	GBF1 (ENSSSCG00000010579) #8	PITX3 (ENSSSCG00000010578) #9	ELOVL3 (ENSSSCG00000010577) #10	NOLC1 (ENSSSCG00000010576) #12	PPRC1 (ENSSSCG00000010575) #13	LDB1 (ENSSSCG00000010574) #14	ARMH3 (ENSSSCG00000010571) #17	KCNIP2 (ENSSSCG00000010570) #18	OGA (ENSSSCG00000010569) #19	NPM3 (ENSSSCG00000010568) #20	FGF8 (ENSSSCG00000036146) #21	FBXW4 (ENSSSCG00000010566) #22	DPCD (ENSSSCG00000010565) #23	POLL (ENSSSCG00000010564) #24	ENSSSCG00000044625	BTRC (ENSSSCG00000010563) #25	LBX1 (ENSSSCG00000022693) #26	TLX1 (ENSSSCG00000010561) #28	KAZALD1 (ENSSSCG00000022429) #29	SFXN3 (ENSSSCG00000022005) #30	ENSSSCG00000053081	ENSSSCG00000010559 #31	LZTS2 (ENSSSCG00000021798) #32	TWNK (ENSSSCG00000030428) #33	MRPL43 (ENSSSCG00000010560) #35	SEMA4G (ENSSSCG00000029533) #37	SLF2 (ENSSSCG00000037592)
Chacoan peccary	MODERN SPECIES	955	CUEDC2 (ENSCWAG00000013653)	FBXL15 (ENSCWAG00000013741)	PSD (ENSCWAG00000013816)	NFKB2 (ENSCWAG00000014044) #7	GBF1 (ENSCWAG00000014118) #8	PITX3 (ENSCWAG00000014269) #9	ELOVL3 (ENSCWAG00000014311) #10	PPRC1 (ENSCWAG00000014410) #13	LDB1 (ENSCWAG00000015033) #14	HPS6 (ENSCWAG00000015092) #15	ARMH3 (ENSCWAG00000015108) #17	KCNIP2 (ENSCWAG00000015234) #18	OGA (ENSCWAG00000016757) #19	NPM3 (ENSCWAG00000016863) #20	FGF8 (ENSCWAG00000016899) #21	FBXW4 (ENSCWAG00000017072) #22	DPCD (ENSCWAG00000017144) #23	POLL (ENSCWAG00000017186) #24	BTRC (ENSCWAG00000017438) #25	LBX1 (ENSCWAG00000017504) #26	TLX1 (ENSCWAG00000017532) #28	KAZALD1 (ENSCWAG00000017546) #29	SFXN3 (ENSCWAG00000017574) #30	PDZD7 (ENSCWAG00000017620) #31	ENSCWAG00000017773	LZTS2 (ENSCWAG00000017792) #32	TWNK (ENSCWAG00000017826) #33	MRPL43 (ENSCWAG00000017917) #35	SEMA4G (ENSCWAG00000017948) #37	SLF2 (ENSCWAG00000017985)	PAX2 (ENSCWAG00000018087)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00960000190004	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Beluga whale	MODERN SPECIES	65	NFKB2 (ENSDLEG00000010672) #7	GBF1 (ENSDLEG00000010758) #8	PITX3 (ENSDLEG00000011013) #9	ELOVL3 (ENSDLEG00000011030) #10	ENSDLEG00000011076	NOLC1 (ENSDLEG00000011092) #12	ENSDLEG00000011138	PPRC1 (ENSDLEG00000011163) #13	LDB1 (ENSDLEG00000011231) #14	HPS6 (ENSDLEG00000011254) #15	ARMH3 (ENSDLEG00000011308) #17	KCNIP2 (ENSDLEG00000011996) #18	MGEA5 (ENSDLEG00000012761) #19	NPM3 (ENSDLEG00000014430) #20	FGF8 (ENSDLEG00000014445) #21	FBXW4 (ENSDLEG00000014542) #22	DPCD (ENSDLEG00000014637) #23	POLL (ENSDLEG00000014662) #24	BTRC (ENSDLEG00000014853) #25	ENSDLEG00000016243	LBX1 (ENSDLEG00000016256) #26	ENSDLEG00000016263	TLX1 (ENSDLEG00000016266) #28	KAZALD1 (ENSDLEG00000016276) #29	SFXN3 (ENSDLEG00000016287) #30	ENSDLEG00000016313 #31	ENSDLEG00000016332 #31	LZTS2 (ENSDLEG00000016343) #32	TWNK (ENSDLEG00000016357) #33	MRPL43 (ENSDLEG00000016373) #35	SEMA4G (ENSDLEG00000016385) #37
Narwhal	MODERN SPECIES	311	NFKB2 (ENSMMNG00015013070) #7	GBF1 (ENSMMNG00015013050) #8	PITX3 (ENSMMNG00015013029) #9	ELOVL3 (ENSMMNG00015013018) #10	ENSMMNG00015013008	ENSMMNG00015013002	NOLC1 (ENSMMNG00015012973) #12	PPRC1 (ENSMMNG00015012955) #13	LDB1 (ENSMMNG00015012934) #14	HPS6 (ENSMMNG00015012924) #15	ARMH3 (ENSMMNG00015012888) #17	KCNIP2 (ENSMMNG00015012789) #18	OGA (ENSMMNG00015012693) #19	NPM3 (ENSMMNG00015012666) #20	FGF8 (ENSMMNG00015012625) #21	FBXW4 (ENSMMNG00015012596) #22	DPCD (ENSMMNG00015012580) #23	POLL (ENSMMNG00015012562) #24	ENSMMNG00015012545	BTRC (ENSMMNG00015012491) #25	LBX1 (ENSMMNG00015012454) #26	ENSMMNG00015012448	TLX1 (ENSMMNG00015012435) #28	KAZALD1 (ENSMMNG00015012419) #29	SFXN3 (ENSMMNG00015012374) #30	PDZD7 (ENSMMNG00015012332) #31	LZTS2 (ENSMMNG00015012307) #32	TWNK (ENSMMNG00015012283) #33	MRPL43 (ENSMMNG00015012273) #35	SEMA4G (ENSMMNG00015012260) #37	SLF2 (ENSMMNG00015012230)
Vaquita	MODERN SPECIES	7	FBXL15 (ENSPSNG00000017495)	PSD (ENSPSNG00000017329)	NFKB2 (ENSPSNG00000017232) #7	GBF1 (ENSPSNG00000017028) #8	PITX3 (ENSPSNG00000016915) #9	ELOVL3 (ENSPSNG00000016876) #10	NOLC1 (ENSPSNG00000016800) #12	PPRC1 (ENSPSNG00000016660) #13	LDB1 (ENSPSNG00000016526) #14	HPS6 (ENSPSNG00000016490) #15	ARMH3 (ENSPSNG00000016447) #17	KCNIP2 (ENSPSNG00000015521) #18	OGA (ENSPSNG00000015199) #19	NPM3 (ENSPSNG00000015111) #20	FGF8 (ENSPSNG00000014763) #21	FBXW4 (ENSPSNG00000014655) #22	DPCD (ENSPSNG00000014573) #23	POLL (ENSPSNG00000014325) #24	ENSPSNG00000014239	BTRC (ENSPSNG00000013992) #25	LBX1 (ENSPSNG00000013867) #26	ENSPSNG00000013837	TLX1 (ENSPSNG00000013783) #28	KAZALD1 (ENSPSNG00000013727) #29	SFXN3 (ENSPSNG00000013687) #30	ENSPSNG00000013625 #31	ENSPSNG00000013544 #31	LZTS2 (ENSPSNG00000013492) #32	TWNK (ENSPSNG00000013395) #33	MRPL43 (ENSPSNG00000013369) #35	SEMA4G (ENSPSNG00000013294) #37
Dolphin	MODERN SPECIES	582								NOLC1 (ENSTTRG00000014974) #12	PPRC1 (ENSTTRG00000014966) #13	ENSTTRG00000014960 #14	ARMH3 (ENSTTRG00000014955) #17	KCNIP2 (ENSTTRG00000014952) #18	OGA (ENSTTRG00000014946) #19	ENSTTRG00000014942	FGF8 (ENSTTRG00000014939) #21	FBXW4 (ENSTTRG00000014933) #22	DPCD (ENSTTRG00000014929) #23	POLL (ENSTTRG00000014923) #24	BTRC (ENSTTRG00000014908) #25	LBX1 (ENSTTRG00000014899) #26
Sperm whale	MODERN SPECIES	12	WBP1L (ENSPCTG00005020108)	ARL3 (ENSPCTG00005020073)	GBF1 (ENSPCTG00005019758) #8	NFKB2 (ENSPCTG00005019685) #7	PSD (ENSPCTG00005019477)	FBXL15 (ENSPCTG00005019435)	CUEDC2 (ENSPCTG00005019392)	MFSD13A (ENSPCTG00005019320)	ACTR1A (ENSPCTG00005019239)	ENSPCTG00005019221	NOLC1 (ENSPCTG00005019168) #12	OGA (ENSPCTG00005019093) #19	LDB1 (ENSPCTG00005019052) #14	HPS6 (ENSPCTG00005019039) #15	ARMH3 (ENSPCTG00005018935) #17	FBXW4 (ENSPCTG00005018820) #22	DPCD (ENSPCTG00005018790) #23	POLL (ENSPCTG00005018631) #24	ENSPCTG00005018571	BTRC (ENSPCTG00005018325) #25	KAZALD1 (ENSPCTG00005018258) #29	SLF2 (ENSPCTG00005018174)	PAX2 (ENSPCTG00005017976)	HIF1AN (ENSPCTG00005017931)	NDUFB8 (ENSPCTG00005017856)	SEC31B (ENSPCTG00005017805)	WNT8B (ENSPCTG00005017722)	SCD (ENSPCTG00005017655)	BLOC1S2 (ENSPCTG00005017426)	CWF19L1 (ENSPCTG00005017347)	CHUK (ENSPCTG00005017211)
Blue whale	MODERN SPECIES	7	PSD (ENSBMSG00010015899)	ENSBMSG00010016052 #7	GBF1 (ENSBMSG00010016085) #8	PITX3 (ENSBMSG00010016125) #9	ELOVL3 (ENSBMSG00010016149) #10	NOLC1 (ENSBMSG00010016181) #12	ENSBMSG00010016224	PPRC1 (ENSBMSG00010016252) #13	LDB1 (ENSBMSG00010016310) #14	HPS6 (ENSBMSG00010016356) #15	ARMH3 (ENSBMSG00010016376) #17	KCNIP2 (ENSBMSG00010016543) #18	OGA (ENSBMSG00010018215) #19	NPM3 (ENSBMSG00010018271) #20	FGF8 (ENSBMSG00010018314) #21	FBXW4 (ENSBMSG00010018485) #22	DPCD (ENSBMSG00010018596) #23	POLL (ENSBMSG00010018641) #24	BTRC (ENSBMSG00010018955) #25	ENSBMSG00010019090	LBX1 (ENSBMSG00010019122) #26	TLX1 (ENSBMSG00010019148) #28	KAZALD1 (ENSBMSG00010019182) #29	SFXN3 (ENSBMSG00010019238) #30	PDZD7 (ENSBMSG00010019325) #31	LZTS2 (ENSBMSG00010019532) #32	TWNK (ENSBMSG00010019580) #33	MRPL43 (ENSBMSG00010019656) #35	SEMA4G (ENSBMSG00010019680) #37	SLF2 (ENSBMSG00010019778)	PAX2 (ENSBMSG00010019829)
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Goat	MODERN SPECIES	18	PSD (ENSCHIG00000016284)	NFKB2 (ENSCHIG00000019967) #7	GBF1 (ENSCHIG00000006795) #8	PITX3 (ENSCHIG00000005050) #9	ELOVL3 (ENSCHIG00000020567) #10	NOLC1 (ENSCHIG00000016755) #12	PPRC1 (ENSCHIG00000011471) #13	LDB1 (ENSCHIG00000012111) #14	ENSCHIG00000016117	HPS6 (ENSCHIG00000002581) #15	ARMH3 (ENSCHIG00000021008) #17	KCNIP2 (ENSCHIG00000023969) #18	OGA (ENSCHIG00000012695) #19	ENSCHIG00000024055 #20	FGF8 (ENSCHIG00000016976) #21	FBXW4 (ENSCHIG00000018380) #22	DPCD (ENSCHIG00000020911) #23	POLL (ENSCHIG00000003400) #24	BTRC (ENSCHIG00000016955) #25	LBX1 (ENSCHIG00000023740) #26	TLX1 (ENSCHIG00000017143) #28	KAZALD1 (ENSCHIG00000020364) #29	SFXN3 (ENSCHIG00000007598) #30	PDZD7 (ENSCHIG00000003600) #31	LZTS2 (ENSCHIG00000017763) #32	TWNK (ENSCHIG00000010638) #33	MRPL43 (ENSCHIG00000023474) #35	SEMA4G (ENSCHIG00000017686) #37	SLF2 (ENSCHIG00000020908)	PAX2 (ENSCHIG00000026895)	HIF1AN (ENSCHIG00000015131)
Rambouillet Sheep	MODERN SPECIES	14	PSD (ENSOARG00020025517)	NFKB2 (ENSOARG00020025505) #7	GBF1 (ENSOARG00020025489) #8	PITX3 (ENSOARG00020025475) #9	ELOVL3 (ENSOARG00020025469) #10	NOLC1 (ENSOARG00020025460) #12	PPRC1 (ENSOARG00020025416) #13	LDB1 (ENSOARG00020025397) #14	HPS6 (ENSOARG00020025382) #15	ARMH3 (ENSOARG00020025366) #17	KCNIP2 (ENSOARG00020025029) #18	OGA (ENSOARG00020024941) #19	NPM3 (ENSOARG00020024924) #20	FGF8 (ENSOARG00020024835) #21	ENSOARG00020024820	FBXW4 (ENSOARG00020024790) #22	DPCD (ENSOARG00020024779) #23	POLL (ENSOARG00020024664) #24	BTRC (ENSOARG00020024573) #25	LBX1 (ENSOARG00020024551) #26	TLX1 (ENSOARG00020024541) #28	KAZALD1 (ENSOARG00020024525) #29	SFXN3 (ENSOARG00020024496) #30	ENSOARG00020024454 #31	LZTS2 (ENSOARG00020024436) #32	TWNK (ENSOARG00020024387) #33	MRPL43 (ENSOARG00020024355) #35	SEMA4G (ENSOARG00020024295) #37	SLF2 (ENSOARG00020024229)	PAX2 (ENSOARG00020024007)	HIF1AN (ENSOARG00020023988)
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Bos	ANCESTRAL SPECIES	23	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Domestic yak	MODERN SPECIES	17	NFKB2 (ENSBGRG00000026174) #7	GBF1 (ENSBGRG00000026160) #8	PITX3 (ENSBGRG00000026147) #9	ELOVL3 (ENSBGRG00000026140) #10	ENSBGRG00000026136	NOLC1 (ENSBGRG00000026111) #12	PPRC1 (ENSBGRG00000026069) #13	LDB1 (ENSBGRG00000026032) #14	HPS6 (ENSBGRG00000026028) #15	ARMH3 (ENSBGRG00000026018) #17	ENSBGRG00000026004	KCNIP2 (ENSBGRG00000025831) #18	OGA (ENSBGRG00000025769) #19	NPM3 (ENSBGRG00000025751) #20	FGF8 (ENSBGRG00000025705) #21	FBXW4 (ENSBGRG00000025687) #22	DPCD (ENSBGRG00000025670) #23	POLL (ENSBGRG00000025605) #24	BTRC (ENSBGRG00000025472) #25	LBX1 (ENSBGRG00000025446) #26	TLX1 (ENSBGRG00000025436) #28	KAZALD1 (ENSBGRG00000025398) #29	SFXN3 (ENSBGRG00000025373) #30	PDZD7 (ENSBGRG00000025335) #31	LZTS2 (ENSBGRG00000025304) #32	TWNK (ENSBGRG00000025268) #33	MRPL43 (ENSBGRG00000025253) #35	SEMA4G (ENSBGRG00000025220) #37	SLF2 (ENSBGRG00000025048)	ENSBGRG00000024942	HIF1AN (ENSBGRG00000024908)
Wild yak	MODERN SPECIES	124	FBXL15 (ENSBMUG00000001578)	PSD (ENSBMUG00000001599)	NFKB2 (ENSBMUG00000001725) #7	GBF1 (ENSBMUG00000001789) #8	PITX3 (ENSBMUG00000001811) #9	ELOVL3 (ENSBMUG00000001815) #10	NOLC1 (ENSBMUG00000001853) #12	PPRC1 (ENSBMUG00000001946) #13	LDB1 (ENSBMUG00000001990) #14	HPS6 (ENSBMUG00000002004) #15	ARMH3 (ENSBMUG00000002100) #17	KCNIP2 (ENSBMUG00000002276) #18	OGA (ENSBMUG00000002507) #19	NPM3 (ENSBMUG00000002562) #20	FGF8 (ENSBMUG00000002582) #21	FBXW4 (ENSBMUG00000002636) #22	DPCD (ENSBMUG00000002662) #23	POLL (ENSBMUG00000002781) #24	BTRC (ENSBMUG00000002953) #25	TLX1 (ENSBMUG00000002998) #28	ENSBMUG00000003033 #29	SFXN3 (ENSBMUG00000003051) #30	PDZD7 (ENSBMUG00000003120) #31	LZTS2 (ENSBMUG00000003163) #32	TWNK (ENSBMUG00000003170) #33	MRPL43 (ENSBMUG00000003186) #35	SEMA4G (ENSBMUG00000003213) #37	SLF2 (ENSBMUG00000003264)	PAX2 (ENSBMUG00000003356)	HIF1AN (ENSBMUG00000003393)	ENSBMUG00000003406
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Hybrid Bos Indicus	MODERN SPECIES	18	FBXL15 (ENSBIXG00005012972)	PSD (ENSBIXG00005012950)	NFKB2 (ENSBIXG00005012914) #7	GBF1 (ENSBIXG00005012824) #8	PITX3 (ENSBIXG00005012731) #9	ELOVL3 (ENSBIXG00005001400) #10	NOLC1 (ENSBIXG00005005482) #12	PPRC1 (ENSBIXG00005012646) #13	LDB1 (ENSBIXG00005012537) #14	HPS6 (ENSBIXG00005000333) #15	ARMH3 (ENSBIXG00005012509) #17	KCNIP2 (ENSBIXG00005012451) #18	OGA (ENSBIXG00005001256) #19	NPM3 (ENSBIXG00005012095) #20	FGF8 (ENSBIXG00005012077) #21	FBXW4 (ENSBIXG00005012014) #22	ENSBIXG00005001225	DPCD (ENSBIXG00005011989) #23	POLL (ENSBIXG00005000418) #24	BTRC (ENSBIXG00005011868) #25	LBX1 (ENSBIXG00005011727) #26	TLX1 (ENSBIXG00005001152) #28	KAZALD1 (ENSBIXG00005011702) #29	SFXN3 (ENSBIXG00005011674) #30	PDZD7 (ENSBIXG00005011644) #31	LZTS2 (ENSBIXG00005001135) #32	SEMA4G (ENSBIXG00005011547) #37	MRPL43 (ENSBIXG00005011491) #35	SLF2 (ENSBIXG00005011450)	PAX2 (ENSBIXG00005011389)	HIF1AN (ENSBIXG00005011295)
Cow	MODERN SPECIES	18	PSD (ENSBTAG00000003580)	NFKB2 (ENSBTAG00000006017) #7	GBF1 (ENSBTAG00000006014) #8	PITX3 (ENSBTAG00000015702) #9	ELOVL3 (ENSBTAG00000015700) #10	NOLC1 (ENSBTAG00000007435) #12	PPRC1 (ENSBTAG00000007427) #13	LDB1 (ENSBTAG00000005780) #14	HPS6 (ENSBTAG00000021942) #15	ARMH3 (ENSBTAG00000013120) #17	KCNIP2 (ENSBTAG00000016343) #18	OGA (ENSBTAG00000016336) #19	NPM3 (ENSBTAG00000016335) #20	FGF8 (ENSBTAG00000001530) #21	ENSBTAG00000053939	FBXW4 (ENSBTAG00000003579) #22	DPCD (ENSBTAG00000003578) #23	POLL (ENSBTAG00000003576) #24	BTRC (ENSBTAG00000007476) #25	LBX1 (ENSBTAG00000002261) #26	TLX1 (ENSBTAG00000011080) #28	KAZALD1 (ENSBTAG00000011489) #29	SFXN3 (ENSBTAG00000005015) #30	ENSBTAG00000016928 #31	ENSBTAG00000039834 #31	LZTS2 (ENSBTAG00000003298) #32	TWNK (ENSBTAG00000003296) #33	MRPL43 (ENSBTAG00000003294) #35	SEMA4G (ENSBTAG00000018604) #37	SLF2 (ENSBTAG00000012077)	PAX2 (ENSBTAG00000021566)
American bison	MODERN SPECIES	3316	PSD (ENSBBBG00000022390)	ENSBBBG00000022351	NFKB2 (ENSBBBG00000005894) #7	GBF1 (ENSBBBG00000022275) #8	PITX3 (ENSBBBG00000022213) #9	ELOVL3 (ENSBBBG00000022200) #10	NOLC1 (ENSBBBG00000005854) #12	PPRC1 (ENSBBBG00000007281) #13	LDB1 (ENSBBBG00000005829) #14	HPS6 (ENSBBBG00000022074) #15	ARMH3 (ENSBBBG00000007684) #17	KCNIP2 (ENSBBBG00000022027) #18	OGA (ENSBBBG00000005781) #19	NPM3 (ENSBBBG00000021685) #20	FGF8 (ENSBBBG00000005761) #21	FBXW4 (ENSBBBG00000021667) #22	DPCD (ENSBBBG00000021651) #23	POLL (ENSBBBG00000021635) #24	BTRC (ENSBBBG00000021525) #25	LBX1 (ENSBBBG00000021437) #26	TLX1 (ENSBBBG00000021434) #28	KAZALD1 (ENSBBBG00000021426) #29	SFXN3 (ENSBBBG00000021411) #30	PDZD7 (ENSBBBG00000021381) #31	LZTS2 (ENSBBBG00000005695) #32	TWNK (ENSBBBG00000008401) #33	MRPL43 (ENSBBBG00000021273) #35	SEMA4G (ENSBBBG00000007106) #37	SLF2 (ENSBBBG00000021234)	PAX2 (ENSBBBG00000021192)	HIF1AN (ENSBBBG00000021073)
Siberian musk deer	MODERN SPECIES	1162	FBXL15 (ENSMMSG00000023546)	PSD (ENSMMSG00000023561)	NFKB2 (ENSMMSG00000023577) #7	GBF1 (ENSMMSG00000023605) #8	PITX3 (ENSMMSG00000023635) #9	ELOVL3 (ENSMMSG00000023638) #10	NOLC1 (ENSMMSG00000023644) #12	PPRC1 (ENSMMSG00000023667) #13	LDB1 (ENSMMSG00000023714) #14	HPS6 (ENSMMSG00000023722) #15	ARMH3 (ENSMMSG00000023729) #17	KCNIP2 (ENSMMSG00000023762) #18	OGA (ENSMMSG00000023879) #19	NPM3 (ENSMMSG00000023905) #20	FGF8 (ENSMMSG00000016398) #21	FBXW4 (ENSMMSG00000016591) #22	DPCD (ENSMMSG00000016659) #23	POLL (ENSMMSG00000016722) #24	BTRC (ENSMMSG00000016899) #25	ENSMMSG00000017075	ENSMMSG00000017086	LBX1 (ENSMMSG00000017109) #26	ENSMMSG00000017131	TLX1 (ENSMMSG00000017162) #28	KAZALD1 (ENSMMSG00000017194) #29	SFXN3 (ENSMMSG00000017226) #30	PDZD7 (ENSMMSG00000017297) #31	LZTS2 (ENSMMSG00000017542) #32	TWNK (ENSMMSG00000017581) #33	MRPL43 (ENSMMSG00000017635) #35	SEMA4G (ENSMMSG00000017665) #37
Yarkand deer	MODERN SPECIES	6	PSD (ENSCHYG00000013510)	NFKB2 (ENSCHYG00000013218) #7	ENSCHYG00000013154	GBF1 (ENSCHYG00000012906) #8	PITX3 (ENSCHYG00000012861) #9	ELOVL3 (ENSCHYG00000012788) #10	NOLC1 (ENSCHYG00000012710) #12	PPRC1 (ENSCHYG00000012117) #13	LDB1 (ENSCHYG00000011992) #14	HPS6 (ENSCHYG00000011978) #15	ARMH3 (ENSCHYG00000011524) #17	KCNIP2 (ENSCHYG00000011315) #18	OGA (ENSCHYG00000011095) #19	NPM3 (ENSCHYG00000011000) #20	FGF8 (ENSCHYG00000010585) #21	FBXW4 (ENSCHYG00000010417) #22	DPCD (ENSCHYG00000010353) #23	POLL (ENSCHYG00000010092) #24	BTRC (ENSCHYG00000009464) #25	LBX1 (ENSCHYG00000009391) #26	TLX1 (ENSCHYG00000009316) #28	KAZALD1 (ENSCHYG00000009247) #29	SFXN3 (ENSCHYG00000008801) #30	PDZD7 (ENSCHYG00000008700) #31	LZTS2 (ENSCHYG00000008636) #32	TWNK (ENSCHYG00000008578) #33	MRPL43 (ENSCHYG00000008553) #35	SEMA4G (ENSCHYG00000008501) #37	SLF2 (ENSCHYG00000008313)	PAX2 (ENSCHYG00000008121)	HIF1AN (ENSCHYG00000008087)
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Alpaca	MODERN SPECIES	1686													ARMH3 (ENSVPAG00000003122) #17	OGA (ENSVPAG00000003121) #19	NPM3 (ENSVPAG00000003120) #20	ENSVPAG00000003119 #22	DPCD (ENSVPAG00000003117) #23	POLL (ENSVPAG00000003115) #24	BTRC (ENSVPAG00000003111) #25
Arabian camel	MODERN SPECIES	2	PSD (ENSCDRG00005014081)	NFKB2 (ENSCDRG00005014133) #7	GBF1 (ENSCDRG00005014219) #8	PITX3 (ENSCDRG00005014430) #9	ELOVL3 (ENSCDRG00005014459) #10	ENSCDRG00005014525	NOLC1 (ENSCDRG00005014563) #12	PPRC1 (ENSCDRG00005014648) #13	LDB1 (ENSCDRG00005014831) #14	HPS6 (ENSCDRG00005014897) #15	ARMH3 (ENSCDRG00005014932) #17	KCNIP2 (ENSCDRG00005015279) #18	OGA (ENSCDRG00005017195) #19	NPM3 (ENSCDRG00005017294) #20	FGF8 (ENSCDRG00005017350) #21	FBXW4 (ENSCDRG00005017631) #22	DPCD (ENSCDRG00005017701) #23	POLL (ENSCDRG00005017726) #24	BTRC (ENSCDRG00005017970) #25	LBX1 (ENSCDRG00005018112) #26	TLX1 (ENSCDRG00005018131) #28	KAZALD1 (ENSCDRG00005018151) #29	SFXN3 (ENSCDRG00005018164) #30	ENSCDRG00005018196 #31	ENSCDRG00005018229 #31	LZTS2 (ENSCDRG00005018247) #32	TWNK (ENSCDRG00005018275) #33	MRPL43 (ENSCDRG00005018344) #35	SEMA4G (ENSCDRG00005018391) #37	SLF2 (ENSCDRG00005018469)	ENSCDRG00005018552
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Xenarthra	ANCESTRAL SPECIES	1135																ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25
Sloth	MODERN SPECIES	5400																FBXW4 (ENSCHOG00000008248) #22	DPCD (ENSCHOG00000008238) #23
Armadillo	MODERN SPECIES	1689																FBXW4 (ENSDNOG00000039812) #22	DPCD (ENSDNOG00000042220) #23	POLL (ENSDNOG00000037866) #24	BTRC (ENSDNOG00000019257) #25	ENSDNOG00000017923	ENSDNOG00000035478	LBX1 (ENSDNOG00000032737) #26	ENSDNOG00000004057	TLX1 (ENSDNOG00000039087) #28
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Tenrec	MODERN SPECIES	5876																FBXW4 (ENSETEG00000018358) #22	DPCD (ENSETEG00000018356) #23	POLL (ENSETEG00000018352) #24
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409
Hyrax	MODERN SPECIES	4971																FBXW4 (ENSPCAG00000004870) #22	DPCD (ENSPCAG00000004838) #23	POLL (ENSPCAG00000004785) #24	BTRC (ENSPCAG00000004714) #25
Elephant	MODERN SPECIES	3	FBXL15 (ENSLAFG00000006822)	PSD (ENSLAFG00000006814)	NFKB2 (ENSLAFG00000006805) #7	GBF1 (ENSLAFG00000006789) #8	PITX3 (ENSLAFG00000006787) #9	ELOVL3 (ENSLAFG00000006785) #10	NOLC1 (ENSLAFG00000014245) #12	PPRC1 (ENSLAFG00000014232) #13	LDB1 (ENSLAFG00000023028) #14	HPS6 (ENSLAFG00000026941) #15	ARMH3 (ENSLAFG00000016076) #17	KCNIP2 (ENSLAFG00000016066) #18	OGA (ENSLAFG00000016050) #19	NPM3 (ENSLAFG00000023022) #20	FGF8 (ENSLAFG00000028373) #21	FBXW4 (ENSLAFG00000009480) #22	DPCD (ENSLAFG00000009478) #23	POLL (ENSLAFG00000009472) #24	BTRC (ENSLAFG00000017122) #25	LBX1 (ENSLAFG00000012214) #26	TLX1 (ENSLAFG00000004179) #28	ENSLAFG00000030369	KAZALD1 (ENSLAFG00000004171) #29	SFXN3 (ENSLAFG00000012767) #30	ENSLAFG00000026596 #31	ENSLAFG00000032509 #31	LZTS2 (ENSLAFG00000009975) #32	TWNK (ENSLAFG00000015859) #33	MRPL43 (ENSLAFG00000028961) #35	ENSLAFG00000005967 #37	SLF2 (ENSLAFG00000005877)
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.k #30	ENSGT00990000203892	ENSGT00950000183002.C #31	ENSGT00940000154078.a.a #32	ENSGT00390000004495 #33	ENSGT00390000015375 #35	ENSGT00940000157186 #37	ENSGT00530000064017.a	ENSGT00940000157412.b
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.k #30	ENSGT00990000203892	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00940000154903
Wallaby	MODERN SPECIES	7320																ENSMEUG00000004074 #22	DPCD (ENSMEUG00000004066) #23	POLL (ENSMEUG00000004057) #24
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968 #7	ENSGT00940000156925 #8	ENSGT00940000161801 #9	ENSGT01050000244965.a #10	ENSGT00730000111092 #12	ENSGT00950000183137.a #13	ENSGT00390000005639.a.b #14	ENSGT00390000001546 #15	ENSGT00390000002554 #17	ENSGT00940000157798 #18	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #28	ENSGT00530000063555.B #29	ENSGT01030000234641.b.a.b.a.a.k #30	ENSGT00990000203892	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00940000154903
Common wonbat	MODERN SPECIES	581	FBXL15 (ENSVURG00010001595)	PSD (ENSVURG00010001616)	NFKB2 (ENSVURG00010001689) #7	GBF1 (ENSVURG00010001734) #8	PITX3 (ENSVURG00010001798) #9	ELOVL3 (ENSVURG00010001812) #10	NOLC1 (ENSVURG00010001912) #12	ENSVURG00010001928 #13	LDB1 (ENSVURG00010001956) #14	HPS6 (ENSVURG00010002006) #15	ARMH3 (ENSVURG00010002048) #17	KCNIP2 (ENSVURG00010002189) #18	OGA (ENSVURG00010002511) #19	NPM3 (ENSVURG00010002534) #20	FGF8 (ENSVURG00010002548) #21	ENSVURG00010002614 #22	DPCD (ENSVURG00010002630) #23	POLL (ENSVURG00010002645) #24	BTRC (ENSVURG00010002745) #25	LBX1 (ENSVURG00010002823) #26	TLX1 (ENSVURG00010002839) #28	KAZALD1 (ENSVURG00010002921) #29	ENSVURG00010002939 #31	LZTS2 (ENSVURG00010002997) #32	TWNK (ENSVURG00010003014) #33	MRPL43 (ENSVURG00010003032) #35	SEMA4G (ENSVURG00010003048) #37	ENSVURG00010003115	PAX2 (ENSVURG00010003166)	ENSVURG00010003240	HIF1AN (ENSVURG00010003265)
koala	MODERN SPECIES	6	CUEDC2 (ENSPCIG00000028992)	FBXL15 (ENSPCIG00000028994)	PSD (ENSPCIG00000028997)	NFKB2 (ENSPCIG00000028999) #7	GBF1 (ENSPCIG00000029004) #8	PITX3 (ENSPCIG00000029009) #9	ELOVL3 (ENSPCIG00000029010) #10	NOLC1 (ENSPCIG00000029012) #12	ENSPCIG00000029013 #13	LDB1 (ENSPCIG00000029016) #14	HPS6 (ENSPCIG00000029018) #15	ARMH3 (ENSPCIG00000029021) #17	KCNIP2 (ENSPCIG00000029025) #18	OGA (ENSPCIG00000009619) #19	FGF8 (ENSPCIG00000009616) #21	FBXW4 (ENSPCIG00000029029) #22	DPCD (ENSPCIG00000029028) #23	POLL (ENSPCIG00000029031) #24	BTRC (ENSPCIG00000029037) #25	LBX1 (ENSPCIG00000012981) #26	TLX1 (ENSPCIG00000031947) #28	KAZALD1 (ENSPCIG00000003284) #29	ENSPCIG00000002751 #30	ENSPCIG00000002730	PDZD7 (ENSPCIG00000002702) #31	LZTS2 (ENSPCIG00000002692) #32	TWNK (ENSPCIG00000002680) #33	MRPL43 (ENSPCIG00000031987) #35	SEMA4G (ENSPCIG00000002663) #37	ENSPCIG00000001129	PAX2 (ENSPCIG00000001066)
Tasmanian devil	MODERN SPECIES	1	FBXL15 (ENSSHAG00000028197)	PSD (ENSSHAG00000018843)	NFKB2 (ENSSHAG00000018852) #7	GBF1 (ENSSHAG00000018856) #8	PITX3 (ENSSHAG00000027003) #9	ELOVL3 (ENSSHAG00000018892) #10	NOLC1 (ENSSHAG00000002222) #12	ENSSHAG00000003350 #13	LDB1 (ENSSHAG00000004146) #14	HPS6 (ENSSHAG00000020530) #15	ARMH3 (ENSSHAG00000005390) #17	KCNIP2 (ENSSHAG00000026676) #18	OGA (ENSSHAG00000008257) #19	NPM3 (ENSSHAG00000008567) #20	FGF8 (ENSSHAG00000008652) #21	FBXW4 (ENSSHAG00000009269) #22	DPCD (ENSSHAG00000025520) #23	POLL (ENSSHAG00000010289) #24	BTRC (ENSSHAG00000010653) #25	LBX1 (ENSSHAG00000012692) #26	TLX1 (ENSSHAG00000026892) #28	KAZALD1 (ENSSHAG00000031990) #29	SFXN3 (ENSSHAG00000025221) #30	PDZD7 (ENSSHAG00000013654) #31	LZTS2 (ENSSHAG00000013716) #32	MRPL43 (ENSSHAG00000027764) #35	SEMA4G (ENSSHAG00000024320) #37	ENSSHAG00000001085	PAX2 (ENSSHAG00000014328)	HIF1AN (ENSSHAG00000026157)	ENSSHAG00000015389
Opossum	MODERN SPECIES		PSD (ENSMODG00000011313)	ENSMODG00000049569 #7	GBF1 (ENSMODG00000011370) #8	ENSMODG00000011378 #10	PITX3 (ENSMODG00000045989) #9	NOLC1 (ENSMODG00000011434) #12	ENSMODG00000011467 #13	LDB1 (ENSMODG00000011500) #14	HPS6 (ENSMODG00000049767) #15	ARMH3 (ENSMODG00000011512) #17	ENSMODG00000019596 #11	KCNIP2 (ENSMODG00000011638) #18	OGA (ENSMODG00000011681) #19	NPM3 (ENSMODG00000011689) #20	FGF8 (ENSMODG00000011718) #21	FBXW4 (ENSMODG00000011732) #22	DPCD (ENSMODG00000011742) #23	POLL (ENSMODG00000011757) #24	BTRC (ENSMODG00000011788) #25	ENSMODG00000027979	ENSMODG00000046533	LBX1 (ENSMODG00000044699) #26	TLX1 (ENSMODG00000011900) #28	KAZALD1 (ENSMODG00000011907) #29	SFXN3 (ENSMODG00000011922) #30	ENSMODG00000045652 #31	ENSMODG00000011937 #31	LZTS2 (ENSMODG00000011955) #32	TWNK (ENSMODG00000011966) #33	MRPL43 (ENSMODG00000011975) #35	SEMA4G (ENSMODG00000011993) #37
Platypus	MODERN SPECIES	7	CUEDC2 (ENSOANG00000001988)	FBXL15 (ENSOANG00000001987)	PSD (ENSOANG00000044398)	NFKB2 (ENSOANG00000006254) #7	GBF1 (ENSOANG00000007818) #8	PITX3 (ENSOANG00000039250) #9	ELOVL3 (ENSOANG00000007823) #10	NOLC1 (ENSOANG00000007824) #12	ENSOANG00000007826 #13	LDB1 (ENSOANG00000007827) #14	ARMH3 (ENSOANG00000007830) #17	KCNIP2 (ENSOANG00000039579) #18	OGA (ENSOANG00000004474) #19	NPM3 (ENSOANG00000039490) #20	FGF8 (ENSOANG00000048473) #21	FBXW4 (ENSOANG00000007313) #22	DPCD (ENSOANG00000045090) #23	POLL (ENSOANG00000007315) #24	BTRC (ENSOANG00000007316) #25	LBX1 (ENSOANG00000044340) #26	TLX1 (ENSOANG00000007318) #28	KAZALD1 (ENSOANG00000047060) #29	SFXN3 (ENSOANG00000007319) #30	PDZD7 (ENSOANG00000007308) #31	LZTS2 (ENSOANG00000046553) #32	ENSOANG00000042089 #33	ENSOANG00000007325 #33	ENSOANG00000007326 #33	ENSOANG00000042676	SEMA4G (ENSOANG00000007328) #37	ENSOANG00000007329