Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000160250 #8	ENSGT00940000155061.a.b #7	ENSGT00940000160968 #9	ENSGT00940000156925 #11	ENSGT00940000161801 #12	ENSGT01050000244965.a #13	ENSGT00730000111092 #14	ENSGT00950000183137.a #15	ENSGT00390000005639.a.b #16	ENSGT00390000001546 #17	ENSGT00390000002554 #18	ENSGT00940000157798	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #27	ENSGT00530000063555.B #28	ENSGT01030000234641.b.a.b.a.a #29	ENSGT00950000183002.C #30	ENSGT00990000203892	ENSGT00940000154078.a.a #31	ENSGT00390000004495 #32	ENSGT00390000015375 #33	ENSGT00940000157186 #34	ENSGT00530000064017.a #35	ENSGT00940000157412.b #36
Equus	ANCESTRAL SPECIES	9	ENSGT00940000160968 #9	ENSGT00940000156925.l #10	ENSGT01050000244965.a.d ##13	ENSGT00940000156925.k #11	ENSGT00940000161801 #12	ENSGT01050000244965.a.c #13	ENSGT00730000111092 #14	ENSGT00950000183137.a #15	ENSGT00390000005639.a.b #16	ENSGT00390000001546 #17	ENSGT00390000002554 #18	ENSGT00940000157798	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #27	ENSGT00530000063555.B #28	ENSGT01030000234641.b.a.b.a.a #29	ENSGT00950000183002.C #30	ENSGT00940000154078.a.a #31	ENSGT00390000004495 #32	ENSGT00390000015375 #33	ENSGT00940000157186 #34	ENSGT00530000064017.a #35	ENSGT00940000157412.b #36	ENSGT00940000157409 #37
Horse	MODERN SPECIES		PSD (ENSECAG00000007172) #7	FBXL15 (ENSECAG00000000576) #8	NFKB2 (ENSECAG00000019593) #9	GBF1 (ENSECAG00000023593) #10	ENSECAG00000047204 #11	PITX3 (ENSECAG00000022294) #12	ELOVL3 (ENSECAG00000023578) #13	NOLC1 (ENSECAG00000052236) #14	PPRC1 (ENSECAG00000009482) #15	LDB1 (ENSECAG00000012948) #16	HPS6 (ENSECAG00000004595) #17	ARMH3 (ENSECAG00000020347) #18	OGA (ENSECAG00000018731) #19	NPM3 (ENSECAG00000007524) #20	FGF8 (ENSECAG00000037372) #21	FBXW4 (ENSECAG00000020477) #22	DPCD (ENSECAG00000009848) #23	POLL (ENSECAG00000015282) #24	BTRC (ENSECAG00000022888) #25	LBX1 (ENSECAG00000032593) #26	TLX1 (ENSECAG00000013342) #27	KAZALD1 (ENSECAG00000013608) #28	SFXN3 (ENSECAG00000019285) #29	PDZD7 (ENSECAG00000012183) #30	LZTS2 (ENSECAG00000013288) #31	TWNK (ENSECAG00000017734) #32	MRPL43 (ENSECAG00000038363) #33	SEMA4G (ENSECAG00000022499) #34	SLF2 (ENSECAG00000011200) #35	PAX2 (ENSECAG00000021123) #36	HIF1AN (ENSECAG00000009178) #37
Donkey	MODERN SPECIES	11	ENSEASG00005038682 #12	ENSEASG00005037872 #13	ENSEASG00005030491 #12	ENSEASG00005037516 #13	ENSEASG00005034292 #12	ENSEASG00005010383 #13	NOLC1 (ENSEASG00005007519) #14	PPRC1 (ENSEASG00005007583) #15	LDB1 (ENSEASG00005007592) #16	HPS6 (ENSEASG00005033362) #17	ARMH3 (ENSEASG00005007687) #18	KCNIP2 (ENSEASG00005007921)	OGA (ENSEASG00005008004) #19	NPM3 (ENSEASG00005008834) #20	FGF8 (ENSEASG00005008843) #21	FBXW4 (ENSEASG00005008860) #22	DPCD (ENSEASG00005008874) #23	POLL (ENSEASG00005008879) #24	BTRC (ENSEASG00005008887) #25	LBX1 (ENSEASG00005034916) #26	TLX1 (ENSEASG00005008902) #27	KAZALD1 (ENSEASG00005008906) #28	SFXN3 (ENSEASG00005008915) #29	PDZD7 (ENSEASG00005038524) #30	LZTS2 (ENSEASG00005008920) #31	TWNK (ENSEASG00005008922) #32	MRPL43 (ENSEASG00005008925) #33	ENSEASG00005030511	SEMA4G (ENSEASG00005008933) #34	SLF2 (ENSEASG00005008951) #35	PAX2 (ENSEASG00005008965) #36
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000160250 #8	ENSGT00940000155061.a.b #7	ENSGT00940000160968 #9	ENSGT00940000156925 #11	ENSGT00940000161801 #12	ENSGT01050000244965.a #13	ENSGT00730000111092 #14	ENSGT00950000183137.a #15	ENSGT00390000005639.a.b #16	ENSGT00390000001546 #17	ENSGT00390000002554 #18	ENSGT00940000157798	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #27	ENSGT00530000063555.B #28	ENSGT01030000234641.b.a.b.a.a #29	ENSGT00950000183002.C #30	ENSGT00990000203892	ENSGT00940000154078.a.a #31	ENSGT00390000004495 #32	ENSGT00390000015375 #33	ENSGT00940000157186 #34	ENSGT00530000064017.a #35	ENSGT00940000157412.b #36
Megabat	MODERN SPECIES	2006																FBXW4 (ENSPVAG00000006480) #22	DPCD (ENSPVAG00000006479) #23	POLL (ENSPVAG00000006478) #24	BTRC (ENSPVAG00000006474) #25
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160250 #8	ENSGT00940000155061.a.b #7	ENSGT00940000160968 #9	ENSGT00940000156925 #11	ENSGT00940000161801 #12	ENSGT01050000244965.a #13	ENSGT00730000111092 #14	ENSGT00950000183137.a #15	ENSGT00390000005639.a.b #16	ENSGT00390000001546 #17	ENSGT00390000002554 #18	ENSGT00940000157798	ENSGT00390000007726.a.a #19	ENSGT00940000158796 #20	ENSGT00940000159518 #21	ENSGT00390000005029 #22	ENSGT00390000014031 #23	ENSGT00940000158515 #24	ENSGT00940000159672 #25	ENSGT00940000161756 #26	ENSGT00940000158698 #27	ENSGT00530000063555.B #28	ENSGT01030000234641.b.a.b.a.a #29	ENSGT00950000183002.C #30	ENSGT00990000203892	ENSGT00940000154078.a.a #31	ENSGT00390000004495 #32	ENSGT00390000015375 #33	ENSGT00940000157186 #34	ENSGT00530000064017.a #35	ENSGT00940000157412.b #36
Greater horseshoe bat	MODERN SPECIES	7	PSD (ENSRFEG00010017833) #7	NFKB2 (ENSRFEG00010017892) #9	GBF1 (ENSRFEG00010017963) #11	PITX3 (ENSRFEG00010018052) #12	ELOVL3 (ENSRFEG00010018094) #13	NOLC1 (ENSRFEG00010018127) #14	PPRC1 (ENSRFEG00010018145) #15	LDB1 (ENSRFEG00010018232) #16	HPS6 (ENSRFEG00010018300) #17	ARMH3 (ENSRFEG00010005361) #18	ENSRFEG00010005540	KCNIP2 (ENSRFEG00010005717)	OGA (ENSRFEG00010005973) #19	NPM3 (ENSRFEG00010006055) #20	FGF8 (ENSRFEG00010006132) #21	FBXW4 (ENSRFEG00010006255) #22	DPCD (ENSRFEG00010006295) #23	POLL (ENSRFEG00010006332) #24	BTRC (ENSRFEG00010006446) #25	ENSRFEG00010006625	LBX1 (ENSRFEG00010006637) #26	ENSRFEG00010006650	TLX1 (ENSRFEG00010006681) #27	KAZALD1 (ENSRFEG00010006705) #28	SFXN3 (ENSRFEG00010006745) #29	PDZD7 (ENSRFEG00010006815) #30	ENSRFEG00010006849	LZTS2 (ENSRFEG00010006867) #31	TWNK (ENSRFEG00010006903) #32	MRPL43 (ENSRFEG00010006991) #33	SEMA4G (ENSRFEG00010007019) #34
Microbat	MODERN SPECIES	1099	FBXL15 (ENSMLUG00000006312) #8	PSD (ENSMLUG00000006298) #7	NFKB2 (ENSMLUG00000006287) #9	GBF1 (ENSMLUG00000006247) #11	ENSMLUG00000028577	PITX3 (ENSMLUG00000023193) #12	ELOVL3 (ENSMLUG00000028990) #13	NOLC1 (ENSMLUG00000001726) #14	PPRC1 (ENSMLUG00000006217) #15	LDB1 (ENSMLUG00000009237) #16	ARMH3 (ENSMLUG00000004996) #18	KCNIP2 (ENSMLUG00000004987)	OGA (ENSMLUG00000004970) #19	NPM3 (ENSMLUG00000004961) #20	FGF8 (ENSMLUG00000004959) #21	FBXW4 (ENSMLUG00000004952) #22	DPCD (ENSMLUG00000004947) #23	POLL (ENSMLUG00000004944) #24	BTRC (ENSMLUG00000004932) #25