Tetrapoda	ANCESTRAL SPECIES	130									ENSGT00940000156120.b	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b #31	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.a ##37	ENSGT00730000111073	ENSGT00950000182841.b.a.a.b.b ##37
Amniota	ANCESTRAL SPECIES	41	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b ##34	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35
Mammalia	ANCESTRAL SPECIES	9	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b ##34	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Theria	ANCESTRAL SPECIES	8	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Primates	ANCESTRAL SPECIES		ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00910000147498	ENSGT00950000182990.a.a.a.b.u.b #34
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.c.a ##14	ENSGT00940000155036.k.a.d #14	ENSGT00940000155036.k.a.c.b.b ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.d #14	ENSGT00940000155036.k.a.c.b.b ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00910000147348	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.d #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00910000147348	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32
Olive baboon	MODERN SPECIES	3	PRPF19 (ENSPANG00000002762) #7	TMEM109 (ENSPANG00000024046) #8	TMEM132A (ENSPANG00000005951) #9	SLC15A3 (ENSPANG00000015258) #10	CD6 (ENSPANG00000003105) #11	CD5 (ENSPANG00000017382) #12	VPS37C (ENSPANG00000038012) #13	ENSPANG00000012130 #14	VWCE (ENSPANG00000000243) #15	DDB1 (ENSPANG00000000242) #16	TKFC (ENSPANG00000002763) #17	CYB561A3 (ENSPANG00000015259) #18	TMEM138 (ENSPANG00000005451) #19	TMEM216 (ENSPANG00000013645) #20	ENSPANG00000006037 #21	SDHAF2 (ENSPANG00000023744) #22	PPP1R32 (ENSPANG00000011447) #23	LRRC10B (ENSPANG00000023823) #24	SYT7 (ENSPANG00000022956) #25	ENSPANG00000035141 #26	DAGLA (ENSPANG00000013480) #27	MYRF (ENSPANG00000013413) #28	TMEM258 (ENSPANG00000005281) #29	FEN1 (ENSPANG00000011882) #30	FADS1 (ENSPANG00000013646) #31	FADS2 (ENSPANG00000015652) #32	ENSPANG00000035579 #33	FADS3 (ENSPANG00000016422) #34	RAB3IL1 (ENSPANG00000023599) #35	BEST1 (ENSPANG00000016663) #36	FTH1 (ENSPANG00000016662) #37
Cercopithecinae_d	ANCESTRAL SPECIES	6									ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00910000147348	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00910000148833	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33
Sooty mangabey	MODERN SPECIES	518									VWCE (ENSCATG00000021513) #15	DDB1 (ENSCATG00000044495) #16	TKFC (ENSCATG00000044633) #17	CYB561A3 (ENSCATG00000041666) #18	TMEM138 (ENSCATG00000038658) #19	TMEM216 (ENSCATG00000032394) #20	CPSF7 (ENSCATG00000042801) #21	SDHAF2 (ENSCATG00000042999) #22	PPP1R32 (ENSCATG00000039418) #23	LRRC10B (ENSCATG00000004145) #24	ENSCATG00000042271	SYT7 (ENSCATG00000043350) #25	ENSCATG00000038917 #26	DAGLA (ENSCATG00000032611) #27	ENSCATG00000015757	MYRF (ENSCATG00000042261) #28	TMEM258 (ENSCATG00000044378) #29	FEN1 (ENSCATG00000006690) #30	ENSCATG00000003311	FADS1 (ENSCATG00000037775) #31	ENSCATG00000041629 #33	ENSCATG00000044239	FADS2 (ENSCATG00000043575) #32
Drill	MODERN SPECIES	1111									VWCE (ENSMLEG00000044054) #15	DDB1 (ENSMLEG00000044136) #16	TKFC (ENSMLEG00000002152) #17	CYB561A3 (ENSMLEG00000040386) #18	TMEM138 (ENSMLEG00000034709) #19	TMEM216 (ENSMLEG00000020360) #20	CPSF7 (ENSMLEG00000031269) #21	SDHAF2 (ENSMLEG00000040587) #22	PPP1R32 (ENSMLEG00000031820) #23	ENSMLEG00000030704	SYT7 (ENSMLEG00000032904) #25	ENSMLEG00000031105 #26	DAGLA (ENSMLEG00000038160) #27	MYRF (ENSMLEG00000044406) #28	TMEM258 (ENSMLEG00000040546) #29	FEN1 (ENSMLEG00000012762) #30	ENSMLEG00000030899	ENSMLEG00000027767	FADS1 (ENSMLEG00000043726) #31	ENSMLEG00000041423	ENSMLEG00000024484 #33	FADS2 (ENSMLEG00000039664) #32	ENSMLEG00000044256
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.c.a ##14	ENSGT00940000155036.k.a.c.b.a ##14	ENSGT00940000155036.k.a.c.b.b ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00910000147348	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00980000199420	ENSGT00910000147498
Pig-tailed macaque	MODERN SPECIES	433									VWCE (ENSMNEG00000035182) #15	DDB1 (ENSMNEG00000031559) #16	TKFC (ENSMNEG00000030238) #17	CYB561A3 (ENSMNEG00000006486) #18	TMEM138 (ENSMNEG00000042127) #19	TMEM216 (ENSMNEG00000038513) #20	CPSF7 (ENSMNEG00000029585) #21	SDHAF2 (ENSMNEG00000031085) #22	PPP1R32 (ENSMNEG00000036834) #23	LRRC10B (ENSMNEG00000008176) #24	SYT7 (ENSMNEG00000045146) #25	ENSMNEG00000028500	ENSMNEG00000030898 #26	DAGLA (ENSMNEG00000018117) #27	MYRF (ENSMNEG00000040464) #28	TMEM258 (ENSMNEG00000042170) #29	FEN1 (ENSMNEG00000018554) #30	ENSMNEG00000035608	FADS1 (ENSMNEG00000002294) #31	FADS2 (ENSMNEG00000038871) #32	ENSMNEG00000043874 #33	ENSMNEG00000035458	ENSMNEG00000016534
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.c.b.a.b ##14	ENSGT00940000155036.k.a.c.b.a.a ##14	ENSGT00940000161089.a #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##37
Rhesus	MODERN SPECIES	5	TMEM132A (ENSMMUG00000052420) #9	SLC15A3 (ENSMMUG00000014535) #10	CD6 (ENSMMUG00000044417) #11	CD5 (ENSMMUG00000015018) #12	VPS37C (ENSMMUG00000015019) #13	PGA4 (ENSMMUG00000037611) ##14	ENSMMUG00000059343 ##14	ENSMMUG00000042208 ##14	VWCE (ENSMMUG00000002688) #15	DDB1 (ENSMMUG00000002691) #16	TKFC (ENSMMUG00000002692) #17	CYB561A3 (ENSMMUG00000022372) #18	TMEM138 (ENSMMUG00000022373) #19	TMEM216 (ENSMMUG00000002365) #20	CPSF7 (ENSMMUG00000015280) #21	SDHAF2 (ENSMMUG00000015281) #22	PPP1R32 (ENSMMUG00000014913) #23	LRRC10B (ENSMMUG00000031111) #24	SYT7 (ENSMMUG00000005122) #25	ENSMMUG00000020911 #26	DAGLA (ENSMMUG00000049301) #27	MYRF (ENSMMUG00000006655) #28	TMEM258 (ENSMMUG00000006656) #29	FEN1 (ENSMMUG00000006657) #30	FADS1 (ENSMMUG00000013798) #31	FADS2 (ENSMMUG00000000327) #32	FADS3 (ENSMMUG00000000328) #34	RAB3IL1 (ENSMMUG00000015148) #35	BEST1 (ENSMMUG00000015147) #36	FTH1 (ENSMMUG00000015146) #37	ENSMMUG00000062874
Crab-eating macaque	MODERN SPECIES	5	CCDC86 (ENSMFAG00000036759)	ZP1 (ENSMFAG00000046156)	PRPF19 (ENSMFAG00000036743) #7	SLC15A3 (ENSMFAG00000038208) #10	TMEM109 (ENSMFAG00000000546) #8	CD6 (ENSMFAG00000033693) #11	ENSMFAG00000056355 ##14	ENSMFAG00000053582 ##14	ENSMFAG00000037169 #15	DDB1 (ENSMFAG00000042035) #16	TKFC (ENSMFAG00000032712) #17	CYB561A3 (ENSMFAG00000045492) #18	TMEM138 (ENSMFAG00000046357) #19	TMEM216 (ENSMFAG00000043498) #20	ENSMFAG00000001401 #21	SDHAF2 (ENSMFAG00000037382) #22	PPP1R32 (ENSMFAG00000043367) #23	SYT7 (ENSMFAG00000043470) #25	ENSMFAG00000002147 #26	DAGLA (ENSMFAG00000065195) #27	MYRF (ENSMFAG00000039452) #28	TMEM258 (ENSMFAG00000035478) #29	FEN1 (ENSMFAG00000009480) #30	FADS1 (ENSMFAG00000037025) #31	ENSMFAG00000041715 #33	FADS2 (ENSMFAG00000042844) #32	ENSMFAG00000062962	FADS3 (ENSMFAG00000040762) #34	RAB3IL1 (ENSMFAG00000045583) #35	BEST1 (ENSMFAG00000033154) #36	ENSMFAG00000007415 ##37
Vervet Monkey	MODERN SPECIES		TMEM109 (ENSCSAG00000006257) #8	TMEM132A (ENSCSAG00000006264) #9	SLC15A3 (ENSCSAG00000006268) #10	CD6 (ENSCSAG00000006284) #11	CD5 (ENSCSAG00000006294) #12	VPS37C (ENSCSAG00000006298) #13	ENSCSAG00000006333 ##14	ENSCSAG00000006360 ##14	VWCE (ENSCSAG00000006378) #15	DDB1 (ENSCSAG00000006392) #16	TKFC (ENSCSAG00000006398) #17	CYB561A3 (ENSCSAG00000006404) #18	TMEM138 (ENSCSAG00000006409) #19	TMEM216 (ENSCSAG00000006412) #20	CPSF7 (ENSCSAG00000006414) #21	SDHAF2 (ENSCSAG00000006418) #22	PPP1R32 (ENSCSAG00000006429) #23	LRRC10B (ENSCSAG00000019177) #24	SYT7 (ENSCSAG00000006435) #25	DAGLA (ENSCSAG00000006443) #27	MYRF (ENSCSAG00000006452) #28	TMEM258 (ENSCSAG00000006457) #29	FEN1 (ENSCSAG00000006461) #30	FADS1 (ENSCSAG00000006469) #31	FADS2 (ENSCSAG00000006475) #32	FADS3 (ENSCSAG00000006479) #34	RAB3IL1 (ENSCSAG00000006483) #35	ENSCSAG00000006491 ##37	BEST1 (ENSCSAG00000006498) #36	INCENP (ENSCSAG00000006508)	SCGB1D1 (ENSCSAG00000006515)
Rhinopithecus	ANCESTRAL SPECIES	15	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.b.a ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00910000147348	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.b.f ##26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00910000147498	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35
Black snub-nosed monkey	MODERN SPECIES	600							ENSRBIG00000007008 ##14	ENSRBIG00000024349 ##14	VWCE (ENSRBIG00000035048) #15	DDB1 (ENSRBIG00000033611) #16	TKFC (ENSRBIG00000031373) #17	CYB561A3 (ENSRBIG00000031687) #18	TMEM138 (ENSRBIG00000030263) #19	TMEM216 (ENSRBIG00000036394) #20	CPSF7 (ENSRBIG00000031429) #21	SDHAF2 (ENSRBIG00000044308) #22	PPP1R32 (ENSRBIG00000038344) #23	ENSRBIG00000036470	SYT7 (ENSRBIG00000022112) #25	ENSRBIG00000031119 ##26	DAGLA (ENSRBIG00000036039) #27	ENSRBIG00000035052	MYRF (ENSRBIG00000036200) #28	TMEM258 (ENSRBIG00000041933) #29	FEN1 (ENSRBIG00000014908) #30	FADS1 (ENSRBIG00000037740) #31	ENSRBIG00000031562 #33	FADS2 (ENSRBIG00000043060) #32	ENSRBIG00000023735	FADS3 (ENSRBIG00000035575) #34	RAB3IL1 (ENSRBIG00000013414) #35
Golden snub-nosed monkey	MODERN SPECIES	2511	TMEM132A (ENSRROG00000039292) #9	SLC15A3 (ENSRROG00000027132) #10	ENSRROG00000004244	CD6 (ENSRROG00000045225) #11	CD5 (ENSRROG00000038716) #12	ENSRROG00000034129	VPS37C (ENSRROG00000043472) #13	ENSRROG00000036152 ##14	VWCE (ENSRROG00000031637) #15	DDB1 (ENSRROG00000041407) #16	TKFC (ENSRROG00000030683) #17	CYB561A3 (ENSRROG00000040114) #18	TMEM138 (ENSRROG00000010574) #19	TMEM216 (ENSRROG00000035894) #20	CPSF7 (ENSRROG00000045009) #21	SDHAF2 (ENSRROG00000037877) #22	PPP1R32 (ENSRROG00000030339) #23	ENSRROG00000041353	SYT7 (ENSRROG00000039141) #25	ENSRROG00000043436 ##26	DAGLA (ENSRROG00000000749) #27	ENSRROG00000041185	MYRF (ENSRROG00000042444) #28	ENSRROG00000043536 #29	FEN1 (ENSRROG00000018718) #30	FADS1 (ENSRROG00000034617) #31	ENSRROG00000035548 #33	FADS2 (ENSRROG00000040657) #32	ENSRROG00000020489	FADS3 (ENSRROG00000037612) #34	RAB3IL1 (ENSRROG00000013229) #35
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.a.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a.a #30	ENSGT00520000061410	ENSGT01100000264610	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.b #14	ENSGT00940000155036.k.a.a.a.b #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a.a #30	ENSGT01100000264610	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.a.a.a #14	ENSGT00940000155036.k.a.b #14	ENSGT00940000155036.k.a.a.a.b #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a.a #30	ENSGT01100000264610	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34
Gorilla	MODERN SPECIES	2	TMEM132A (ENSGGOG00000008661) #9	ENSGGOG00000008671 #10	CD6 (ENSGGOG00000008678) #11	CD5 (ENSGGOG00000006638) #12	VPS37C (ENSGGOG00000016788) #13	ENSGGOG00000000140 #14	ENSGGOG00000040956 ##14	ENSGGOG00000039945 #14	VWCE (ENSGGOG00000004043) #15	DDB1 (ENSGGOG00000004052) #16	TKFC (ENSGGOG00000004065) #17	CYB561A3 (ENSGGOG00000004073) #18	TMEM138 (ENSGGOG00000004077) #19	TMEM216 (ENSGGOG00000025195) #20	ENSGGOG00000042753 #21	SDHAF2 (ENSGGOG00000025140) #22	PPP1R32 (ENSGGOG00000016977) #23	SYT7 (ENSGGOG00000016983) #25	ENSGGOG00000042672 ##26	DAGLA (ENSGGOG00000001163) #27	MYRF (ENSGGOG00000012529) #28	ENSGGOG00000022221	TMEM258 (ENSGGOG00000012557) #29	FEN1 (ENSGGOG00000012562) #30	ENSGGOG00000041619	ENSGGOG00000040582	FADS1 (ENSGGOG00000012565) #31	ENSGGOG00000012374 #32	ENSGGOG00000043363	ENSGGOG00000037580 #33	FADS3 (ENSGGOG00000012388) #34
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.b #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a.a #30	ENSGT01100000264610	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34
Human	MODERN SPECIES	2	SLC15A3 (ENSG00000110446) #10	CD6 (ENSG00000013725) #11	CD5 (ENSG00000110448) #12	VPS37C (ENSG00000167987) #13	PGA3 (ENSG00000229859) #14	PGA4 (ENSG00000229183) #14	PGA5 (ENSG00000256713) #14	VWCE (ENSG00000167992) #15	DDB1 (ENSG00000167986) #16	TKFC (ENSG00000149476) #17	CYB561A3 (ENSG00000162144) #18	TMEM138 (ENSG00000149483) #19	TMEM216 (ENSG00000187049) #20	CPSF7 (ENSG00000149532) #21	ENSG00000256591	SDHAF2 (ENSG00000167985) #22	PPP1R32 (ENSG00000162148) #23	LRRC10B (ENSG00000204950) #24	SYT7 (ENSG00000011347) #25	DAGLA (ENSG00000134780) #27	MYRF (ENSG00000124920) #28	TMEM258 (ENSG00000134825) #29	FEN1 (ENSG00000168496) #30	FADS2 (ENSG00000134824) #32	FADS1 (ENSG00000149485) #31	FADS3 (ENSG00000221968) #34	RAB3IL1 (ENSG00000167994) #35	BEST1 (ENSG00000167995) #36	FTH1 (ENSG00000167996) #37	INCENP (ENSG00000149503)	SCGB1D1 (ENSG00000168515)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00910000147309	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00910000147781	ENSGT00950000183012.A.b #13	ENSGT00940000155036.k.a.b.b #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00390000017839.o.b.b.a.a.b #26	ENSGT00940000161192 #27	ENSGT00500000045299	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a.a #30	ENSGT01100000264610	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33
Chimpanzee	MODERN SPECIES	2	SLC15A3 (ENSPTRG00000003727) #10	CD6 (ENSPTRG00000003728) #11	ENSPTRG00000049054	CD5 (ENSPTRG00000003729) #12	VPS37C (ENSPTRG00000039991) #13	ENSPTRG00000050302	ENSPTRG00000003731 #14	ENSPTRG00000039058 ##14	VWCE (ENSPTRG00000003736) #15	DDB1 (ENSPTRG00000003737) #16	TKFC (ENSPTRG00000003738) #17	CYB561A3 (ENSPTRG00000003739) #18	TMEM138 (ENSPTRG00000003740) #19	TMEM216 (ENSPTRG00000003741) #20	CPSF7 (ENSPTRG00000003742) #21	SDHAF2 (ENSPTRG00000003743) #22	PPP1R32 (ENSPTRG00000003744) #23	ENSPTRG00000044765	LRRC10B (ENSPTRG00000051448) #24	SYT7 (ENSPTRG00000003745) #25	ENSPTRG00000043757 #26	DAGLA (ENSPTRG00000003747) #27	MYRF (ENSPTRG00000003749) #28	ENSPTRG00000048157	TMEM258 (ENSPTRG00000003750) #29	FEN1 (ENSPTRG00000003751) #30	ENSPTRG00000052250	ENSPTRG00000047132	FADS1 (ENSPTRG00000041542) #31	FADS2 (ENSPTRG00000003753) #32	ENSPTRG00000052244 #33
Bonobo	MODERN SPECIES	2	TMEM109 (ENSPPAG00000027587) #8	TMEM132A (ENSPPAG00000040745) #9	SLC15A3 (ENSPPAG00000024363) #10	CD6 (ENSPPAG00000037744) #11	ENSPPAG00000005140	CD5 (ENSPPAG00000040152) #12	VPS37C (ENSPPAG00000032955) #13	ENSPPAG00000042417 #14	VWCE (ENSPPAG00000034720) #15	DDB1 (ENSPPAG00000035343) #16	TKFC (ENSPPAG00000027814) #17	CYB561A3 (ENSPPAG00000041741) #18	TMEM138 (ENSPPAG00000004623) #19	TMEM216 (ENSPPAG00000016205) #20	CPSF7 (ENSPPAG00000028232) #21	SDHAF2 (ENSPPAG00000043200) #22	PPP1R32 (ENSPPAG00000038205) #23	LRRC10B (ENSPPAG00000033664) #24	SYT7 (ENSPPAG00000041839) #25	ENSPPAG00000031575 #26	DAGLA (ENSPPAG00000026492) #27	MYRF (ENSPPAG00000032816) #28	ENSPPAG00000028642	ENSPPAG00000032794 #29	FEN1 (ENSPPAG00000025776) #30	ENSPPAG00000039005	FADS1 (ENSPPAG00000042777) #31	FADS2 (ENSPPAG00000038024) #32	ENSPPAG00000041561 #33	FADS3 (ENSPPAG00000027798) #34	RAB3IL1 (ENSPPAG00000042430) #35
Orangutan	MODERN SPECIES	2	PRPF19 (ENSPPYG00000003202) #7	TMEM109 (ENSPPYG00000003201) #8	TMEM132A (ENSPPYG00000003200) #9	SLC15A3 (ENSPPYG00000003199) #10	CD6 (ENSPPYG00000003198) #11	CD5 (ENSPPYG00000003197) #12	VPS37C (ENSPPYG00000003196) #13	ENSPPYG00000003195 #14	VWCE (ENSPPYG00000003194) #15	DDB1 (ENSPPYG00000003193) #16	TKFC (ENSPPYG00000003192) #17	CYB561A3 (ENSPPYG00000003191) #18	ENSPPYG00000003190 #19	TMEM216 (ENSPPYG00000037321) #20	CPSF7 (ENSPPYG00000003188) #21	SDHAF2 (ENSPPYG00000003187) #22	ENSPPYG00000040375	PPP1R32 (ENSPPYG00000003186) #23	LRRC10B (ENSPPYG00000003185) #24	SYT7 (ENSPPYG00000003184) #25	ENSPPYG00000034762 ##26	DAGLA (ENSPPYG00000003183) #27	ENSPPYG00000003182	MYRF (ENSPPYG00000003180) #28	TMEM258 (ENSPPYG00000025909) #29	ENSPPYG00000039974	ENSPPYG00000038295	FEN1 (ENSPPYG00000003179) #30	FADS1 (ENSPPYG00000003178) #31	ENSPPYG00000033771 #33	FADS2 (ENSPPYG00000003177) #32
Gibbon	MODERN SPECIES	19	PRPF19 (ENSNLEG00000013618) #7	TMEM109 (ENSNLEG00000013665) #8	TMEM132A (ENSNLEG00000013672) #9	SLC15A3 (ENSNLEG00000013695) #10	CD6 (ENSNLEG00000013729) #11	ENSNLEG00000001949 #12	VPS37C (ENSNLEG00000001991) #13	ENSNLEG00000035595 ##14	VWCE (ENSNLEG00000031665) #15	DDB1 (ENSNLEG00000002022) #16	TKFC (ENSNLEG00000002383) #17	ENSNLEG00000027216	TMEM138 (ENSNLEG00000002484) #19	TMEM216 (ENSNLEG00000002496) #20	CPSF7 (ENSNLEG00000002529) #21	SDHAF2 (ENSNLEG00000002607) #22	PPP1R32 (ENSNLEG00000002622) #23	LRRC10B (ENSNLEG00000018909) #24	ENSNLEG00000034649 #25	DAGLA (ENSNLEG00000002700) #27	ENSNLEG00000002708	MYRF (ENSNLEG00000003069) #28	TMEM258 (ENSNLEG00000003117) #29	ENSNLEG00000035922 #29	FEN1 (ENSNLEG00000003126) #30	ENSNLEG00000028758	FADS1 (ENSNLEG00000034179) #31	ENSNLEG00000003138	FADS2 (ENSNLEG00000003214) #32	ENSNLEG00000031350 #33	ENSNLEG00000003139 #34
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT01100000264610	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37
Cebidae	ANCESTRAL SPECIES		ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.b ##37
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.a.b ##37
Bolivian squirrel monkey	MODERN SPECIES	42	PRPF19 (ENSSBOG00000022840) #7	TMEM109 (ENSSBOG00000033047) #8	TMEM132A (ENSSBOG00000029033) #9	SLC15A3 (ENSSBOG00000030393) #10	CD6 (ENSSBOG00000019140) #11	CD5 (ENSSBOG00000030827) #12	VPS37C (ENSSBOG00000005239) #13	ENSSBOG00000023353 ##14	VWCE (ENSSBOG00000033384) #15	DDB1 (ENSSBOG00000019775) #16	TKFC (ENSSBOG00000016343) #17	CYB561A3 (ENSSBOG00000018635) #18	TMEM138 (ENSSBOG00000030923) #19	TMEM216 (ENSSBOG00000007291) #20	CPSF7 (ENSSBOG00000018431) #21	SDHAF2 (ENSSBOG00000025344) #22	PPP1R32 (ENSSBOG00000019266) #23	SYT7 (ENSSBOG00000025988) #25	DAGLA (ENSSBOG00000025299) #27	MYRF (ENSSBOG00000023627) #28	TMEM258 (ENSSBOG00000028987) #29	FEN1 (ENSSBOG00000019019) #30	FADS1 (ENSSBOG00000028976) #31	FADS2 (ENSSBOG00000030735) #32	ENSSBOG00000021560 #33	FADS3 (ENSSBOG00000014840) #34	RAB3IL1 (ENSSBOG00000030643) #35	BEST1 (ENSSBOG00000027813) #36	FTH1 (ENSSBOG00000027832) #37	ENSSBOG00000015673	INCENP (ENSSBOG00000013254)
Capuchin	MODERN SPECIES	770					CD5 (ENSCCAG00000029569) #12	VPS37C (ENSCCAG00000025406) #13	ENSCCAG00000000364	ENSCCAG00000020941 ##14	VWCE (ENSCCAG00000029179) #15	DDB1 (ENSCCAG00000035883) #16	TKFC (ENSCCAG00000021373) #17	CYB561A3 (ENSCCAG00000029907) #18	TMEM138 (ENSCCAG00000035135) #19	TMEM216 (ENSCCAG00000027796) #20	CPSF7 (ENSCCAG00000032367) #21	SDHAF2 (ENSCCAG00000030162) #22	PPP1R32 (ENSCCAG00000034916) #23
Marmoset	MODERN SPECIES	2	TMEM132A (ENSCJAG00000016603) #9	SLC15A3 (ENSCJAG00000070349) #10	CD6 (ENSCJAG00000016561) #11	CD5 (ENSCJAG00000017364) #12	VPS37C (ENSCJAG00000054957) #13	PGA (ENSCJAG00000019394) ##14	VWCE (ENSCJAG00000019384) #15	DDB1 (ENSCJAG00000019319) #16	ENSCJAG00000077363	TKFC (ENSCJAG00000019305) #17	CYB561A3 (ENSCJAG00000019302) #18	TMEM138 (ENSCJAG00000039370) #19	ENSCJAG00000076596	TMEM216 (ENSCJAG00000019299) #20	CPSF7 (ENSCJAG00000019282) #21	SDHAF2 (ENSCJAG00000019276) #22	ENSCJAG00000021865	PPP1R32 (ENSCJAG00000019272) #23	LRRC10B (ENSCJAG00000021864) #24	SYT7 (ENSCJAG00000019261) #25	ENSCJAG00000086417	DAGLA (ENSCJAG00000019248) #27	TMEM258 (ENSCJAG00000019216) #29	FEN1 (ENSCJAG00000055903) #30	FADS1 (ENSCJAG00000047481) #31	FADS2 (ENSCJAG00000019168) #32	ENSCJAG00000046538 #33	RAB3IL1 (ENSCJAG00000019137) #35	BEST1 (ENSCJAG00000019095) #36	ENSCJAG00000047003 ##37	INCENP (ENSCJAG00000019069)
Mas night monkey	MODERN SPECIES	336	PRPF19 (ENSANAG00000021762) #7	TMEM109 (ENSANAG00000031395) #8	TMEM132A (ENSANAG00000030870) #9	SLC15A3 (ENSANAG00000030455) #10	CD6 (ENSANAG00000034253) #11	CD5 (ENSANAG00000037540) #12	VPS37C (ENSANAG00000029520) #13	ENSANAG00000034439 ##14	VWCE (ENSANAG00000038397) #15	DDB1 (ENSANAG00000021878) #16	TKFC (ENSANAG00000036361) #17	CYB561A3 (ENSANAG00000026202) #18	TMEM138 (ENSANAG00000031827) #19	TMEM216 (ENSANAG00000038321) #20	CPSF7 (ENSANAG00000024635) #21	SDHAF2 (ENSANAG00000025872) #22	PPP1R32 (ENSANAG00000037082) #23	LRRC10B (ENSANAG00000011048) #24	SYT7 (ENSANAG00000020025) #25	DAGLA (ENSANAG00000026250) #27	MYRF (ENSANAG00000037558) #28	TMEM258 (ENSANAG00000035195) #29	FEN1 (ENSANAG00000019971) #30	ENSANAG00000019246	FADS1 (ENSANAG00000029557) #31	FADS2 (ENSANAG00000035889) #32	ENSANAG00000038346 #33	FADS3 (ENSANAG00000022958) #34	RAB3IL1 (ENSANAG00000035875) #35	BEST1 (ENSANAG00000037419) #36	ENSANAG00000032960 ##37
Tarsier	MODERN SPECIES	1697	PRPF19 (ENSTSYG00000006860) #7	TMEM109 (ENSTSYG00000028196) #8	TMEM132A (ENSTSYG00000035360) #9	SLC15A3 (ENSTSYG00000011309) #10	CD6 (ENSTSYG00000027603) #11	CD5 (ENSTSYG00000032631) #12	VPS37C (ENSTSYG00000028575) #13	ENSTSYG00000036274 ##14	VWCE (ENSTSYG00000008832) #15	DDB1 (ENSTSYG00000008027) #16	TKFC (ENSTSYG00000001794) #17	CYB561A3 (ENSTSYG00000001827) #18	TMEM138 (ENSTSYG00000028083) #19	TMEM216 (ENSTSYG00000031536) #20	CPSF7 (ENSTSYG00000010138) #21	SDHAF2 (ENSTSYG00000002765) #22	PPP1R32 (ENSTSYG00000000242) #23	SYT7 (ENSTSYG00000027319) #25
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Bushbaby	MODERN SPECIES	255					ENSOGAG00000033713	ENSOGAG00000027956	ENSOGAG00000016091 ##14	VWCE (ENSOGAG00000016095) #15	DDB1 (ENSOGAG00000016103) #16	TKFC (ENSOGAG00000016120) #17	CYB561A3 (ENSOGAG00000016129) #18	TMEM138 (ENSOGAG00000016132) #19	TMEM216 (ENSOGAG00000016134) #20	CPSF7 (ENSOGAG00000027958) #21	ENSOGAG00000016145	SDHAF2 (ENSOGAG00000016141) #22	PPP1R32 (ENSOGAG00000013699) #23	LRRC10B (ENSOGAG00000024321) #24	SYT7 (ENSOGAG00000033441) #25	DAGLA (ENSOGAG00000012574) #27	MYRF (ENSOGAG00000010786) #28	TMEM258 (ENSOGAG00000010793) #29	FEN1 (ENSOGAG00000024238) #30	FADS1 (ENSOGAG00000010794) #31	FADS2 (ENSOGAG00000004500) #32	FADS3 (ENSOGAG00000028613) #34	RAB3IL1 (ENSOGAG00000004501) #35	BEST1 (ENSOGAG00000026226) #36	ENSOGAG00000025354 ##37	INCENP (ENSOGAG00000012974)	ENSOGAG00000030358
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Mouse lemur	MODERN SPECIES	27	PRPF19 (ENSMICG00000011236) #7	TMEM109 (ENSMICG00000037640) #8	TMEM132A (ENSMICG00000042560) #9	SLC15A3 (ENSMICG00000027981) #10	CD6 (ENSMICG00000011288) #11	CD5 (ENSMICG00000013628) #12	VPS37C (ENSMICG00000034100) #13	ENSMICG00000013645 ##14	VWCE (ENSMICG00000013662) #15	DDB1 (ENSMICG00000013703) #16	TKFC (ENSMICG00000013737) #17	CYB561A3 (ENSMICG00000013766) #18	TMEM138 (ENSMICG00000047581) #19	TMEM216 (ENSMICG00000013785) #20	CPSF7 (ENSMICG00000013788) #21	SDHAF2 (ENSMICG00000013808) #22	ENSMICG00000027025	PPP1R32 (ENSMICG00000012749) #23	LRRC10B (ENSMICG00000030558) #24	SYT7 (ENSMICG00000013836) #25	DAGLA (ENSMICG00000013847) #27	MYRF (ENSMICG00000013870) #28	TMEM258 (ENSMICG00000013894) #29	ENSMICG00000029413	FADS1 (ENSMICG00000013915) #31	FADS2 (ENSMICG00000004145) #32	FADS3 (ENSMICG00000032887) #34	RAB3IL1 (ENSMICG00000005824) #35	BEST1 (ENSMICG00000005843) #36	ENSMICG00000035165 ##37	ENSMICG00000031901
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Coquerels sifaka	MODERN SPECIES	904						CD5 (ENSPCOG00000027120) #12	VPS37C (ENSPCOG00000014185) #13	ENSPCOG00000020865 ##14	VWCE (ENSPCOG00000026303) #15	DDB1 (ENSPCOG00000015176) #16	TKFC (ENSPCOG00000002100) #17	CYB561A3 (ENSPCOG00000022967) #18	TMEM138 (ENSPCOG00000008236) #19	ENSPCOG00000016422 #20	CPSF7 (ENSPCOG00000011976) #21	SDHAF2 (ENSPCOG00000018683) #22	PPP1R32 (ENSPCOG00000018077) #23	LRRC10B (ENSPCOG00000013431) #24	SYT7 (ENSPCOG00000027641) #25	DAGLA (ENSPCOG00000020445) #27	MYRF (ENSPCOG00000020191) #28	TMEM258 (ENSPCOG00000016788) #29	FEN1 (ENSPCOG00000012915) #30	ENSPCOG00000028372	FADS1 (ENSPCOG00000025908) #31	FADS2 (ENSPCOG00000020555) #32	FADS3 (ENSPCOG00000027151) #34	RAB3IL1 (ENSPCOG00000014649) #35	BEST1 (ENSPCOG00000018035) #36	ENSPCOG00000018833 ##37	ENSPCOG00000022535
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Tree shrew	MODERN SPECIES	2974													CYB561A3 (ENSTBEG00000010250) #18	TMEM138 (ENSTBEG00000010461) #19	TMEM216 (ENSTBEG00000010473) #20	SDHAF2 (ENSTBEG00000010497) #22	PPP1R32 (ENSTBEG00000010559) #23	LRRC10B (ENSTBEG00000010680) #24
Glires	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036.l.b.b.a.a ##14	ENSGT00940000155036.l.b.b.a.b ##14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866.f.a.d	ENSGT00390000013802.v.b
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	450	ENSOCUG00000026947 ##14	ENSOCUG00000033237	ENSOCUG00000025155 ##14	ENSOCUG00000023678 ##14	ENSOCUG00000022826 ##14	ENSOCUG00000024836 ##14	ENSOCUG00000038141 ##14	ENSOCUG00000023022 ##14	ENSOCUG00000026790 ##14	VWCE (ENSOCUG00000001660) #15	DDB1 (ENSOCUG00000001667) #16	TKFC (ENSOCUG00000001673) #17	CYB561A3 (ENSOCUG00000001677) #18	ENSOCUG00000001681 #19	CPSF7 (ENSOCUG00000024726) #21	ENSOCUG00000001683 #22	PPP1R32 (ENSOCUG00000000055) #23	SYT7 (ENSOCUG00000014577) #25	DAGLA (ENSOCUG00000012783) #27	MYRF (ENSOCUG00000003269) #28	TMEM258 (ENSOCUG00000003287) #29	FEN1 (ENSOCUG00000003290) #30	ENSOCUG00000032016	FADS2 (ENSOCUG00000003499) #32	FADS3 (ENSOCUG00000014364) #34	RAB3IL1 (ENSOCUG00000026271) #35	BEST1 (ENSOCUG00000014092) #36	ENSOCUG00000037189	ENSOCUG00000014108 ##37	INCENP (ENSOCUG00000011258)	ENSOCUG00000015682
Rabbit	MODERN SPECIES	11	ENSOCUG00000022964	NEIL3 (ENSOCUG00000001040)	ENSOCUG00000023661	VEGFC (ENSOCUG00000017884)	ENSOCUG00000012211	ENSOCUG00000029741	ASB5 (ENSOCUG00000012592)	SPATA4 (ENSOCUG00000013569)	WDR17 (ENSOCUG00000015110)	GPM6A (ENSOCUG00000007631)	ENSOCUG00000037142	ENSOCUG00000007714	ENSOCUG00000013889	GLRA3 (ENSOCUG00000017638)	HPGD (ENSOCUG00000016289)	ENSOCUG00000026425 #22	CEP44 (ENSOCUG00000013963)	FBXO8 (ENSOCUG00000008888)	ENSOCUG00000023773	ENSOCUG00000016256	SCRG1 (ENSOCUG00000000616)	SAP30 (ENSOCUG00000010418)	ENSOCUG00000000074	GALNT7 (ENSOCUG00000011080)	ENSOCUG00000031901	ENSOCUG00000038954	GALNTL6 (ENSOCUG00000000888)	AADAT (ENSOCUG00000011526)	MFAP3L (ENSOCUG00000011514)	ENSOCUG00000036380	HPF1 (ENSOCUG00000026923)
Pika	MODERN SPECIES	3147									VWCE (ENSOPRG00000008229) #15	DDB1 (ENSOPRG00000008254) #16	TKFC (ENSOPRG00000008299) #17	CYB561A3 (ENSOPRG00000008327) #18	TMEM138 (ENSOPRG00000008341) #19	TMEM216 (ENSOPRG00000008351) #20	CPSF7 (ENSOPRG00000008353) #21	SDHAF2 (ENSOPRG00000008361) #22	ENSOPRG00000008370 #23	SYT7 (ENSOPRG00000008386) #25	ENSOPRG00000008399	MYRF (ENSOPRG00000008454) #28	TMEM258 (ENSOPRG00000008491) #29
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p ##37	ENSGT00730000111073
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.d ##37	ENSGT00730000111073
Chinese hamster chok1gshd	MODERN SPECIES	401	Tmem109 (ENSCGRG00001013294) #8	Tmem132a (ENSCGRG00001024216) #9	Slc15a3 (ENSCGRG00001023689) #10	ENSCGRG00001010151	Cd6 (ENSCGRG00001015074) #11	Cd5 (ENSCGRG00001021859) #12	Vps37c (ENSCGRG00001022544) #13	Pga5 (ENSCGRG00001021989)	Vwce (ENSCGRG00001017748) #15	Ddb1 (ENSCGRG00001016599) #16	Tkfc (ENSCGRG00001018294) #17	Cyb561a3 (ENSCGRG00001011459) #18	Tmem138 (ENSCGRG00001009418) #19	Tmem216 (ENSCGRG00001006200) #20	Cpsf7 (ENSCGRG00001020382) #21	Sdhaf2 (ENSCGRG00001018789) #22	Ppp1r32 (ENSCGRG00001010292) #23	Lrrc10b (ENSCGRG00001011211) #24	Syt7 (ENSCGRG00001022753) #25	Dagla (ENSCGRG00001004102) #27	Myrf (ENSCGRG00001021116) #28	ENSCGRG00001013240 #29	Fen1 (ENSCGRG00001009889) #30	Fads1 (ENSCGRG00001018831) #31	Fads2 (ENSCGRG00001013858) #32	Fads3 (ENSCGRG00001017095) #34	Rab3il1 (ENSCGRG00001015063) #35	ENSCGRG00001014139 #36	FTH1 (ENSCGRG00001020220) ##37	Incenp (ENSCGRG00001019028)	Scgb2a2 (ENSCGRG00001015765)
Golden Hamster	MODERN SPECIES	617	Prpf19 (ENSMAUG00000012585) #7	Tmem109 (ENSMAUG00000011446) #8	Tmem132a (ENSMAUG00000011465) #9	Slc15a3 (ENSMAUG00000012683) #10	Cd6 (ENSMAUG00000012522) #11	Cd5 (ENSMAUG00000011872) #12	Vps37c (ENSMAUG00000011856) #13	Pga5 (ENSMAUG00000012386)	Vwce (ENSMAUG00000013253) #15	Ddb1 (ENSMAUG00000012926) #16	Tkfc (ENSMAUG00000011622) #17	Cyb561a3 (ENSMAUG00000011671) #18	Tmem138 (ENSMAUG00000011913) #19	Tmem216 (ENSMAUG00000012971) #20	Cpsf7 (ENSMAUG00000013020) #21	Sdhaf2 (ENSMAUG00000011818) #22	Ppp1r32 (ENSMAUG00000011958) #23	Lrrc10b (ENSMAUG00000002510) #24	Syt7 (ENSMAUG00000012225) #25	Dagla (ENSMAUG00000013406) #27	Myrf (ENSMAUG00000013986) #28	Tmem258 (ENSMAUG00000011933) #29	Fen1 (ENSMAUG00000012401) #30	ENSMAUG00000012365	Fads1 (ENSMAUG00000013100) #31	Fads2 (ENSMAUG00000012801) #32	Fads3 (ENSMAUG00000012190) #34	Rab3il1 (ENSMAUG00000012007) #35	ENSMAUG00000013033 #36	Fth1 (ENSMAUG00000013659) ##37	Incenp (ENSMAUG00000013427)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00520000061410	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073
Prairie vole	MODERN SPECIES	139	Tmem109 (ENSMOCG00000016955) #8	Tmem132a (ENSMOCG00000015981) #9	Slc15a3 (ENSMOCG00000009628) #10	Cd6 (ENSMOCG00000000759) #11	Cd5 (ENSMOCG00000021640) #12	Vps37c (ENSMOCG00000003731) #13	Pga5 (ENSMOCG00000020424)	Vwce (ENSMOCG00000011662) #15	ENSMOCG00000013155	Ddb1 (ENSMOCG00000020499) #16	Tkfc (ENSMOCG00000002905) #17	Cyb561a3 (ENSMOCG00000007624) #18	Tmem138 (ENSMOCG00000020641) #19	Tmem216 (ENSMOCG00000012388) #20	Cpsf7 (ENSMOCG00000000072) #21	Sdhaf2 (ENSMOCG00000001363) #22	Ppp1r32 (ENSMOCG00000013985) #23	Lrrc10b (ENSMOCG00000009416) #24	Syt7 (ENSMOCG00000000989) #25	Dagla (ENSMOCG00000019065) #27	Myrf (ENSMOCG00000014434) #28	ENSMOCG00000020555 #29	ENSMOCG00000015914	Fen1 (ENSMOCG00000013014) #30	Fads1 (ENSMOCG00000020283) #31	Fads2 (ENSMOCG00000003775) #32	Fads3 (ENSMOCG00000018791) #34	Rab3il1 (ENSMOCG00000011001) #35	ENSMOCG00000014676 #36	Fth1 (ENSMOCG00000000310) ##37	ENSMOCG00000002414
Northern American deer mouse	MODERN SPECIES		Prpf19 (ENSPEMG00000019270) #7	Tmem109 (ENSPEMG00000026894) #8	Tmem132a (ENSPEMG00000003330) #9	Slc15a3 (ENSPEMG00000006717) #10	Cd6 (ENSPEMG00000010967) #11	Cd5 (ENSPEMG00000011153) #12	Vps37c (ENSPEMG00000027107) #13	Pga5 (ENSPEMG00000008099)	Vwce (ENSPEMG00000013366) #15	Ddb1 (ENSPEMG00000012241) #16	Tkfc (ENSPEMG00000015863) #17	Cyb561a3 (ENSPEMG00000007944) #18	Tmem138 (ENSPEMG00000025635) #19	Tmem216 (ENSPEMG00000011742) #20	Cpsf7 (ENSPEMG00000012648) #21	Sdhaf2 (ENSPEMG00000008472) #22	Ppp1r32 (ENSPEMG00000002497) #23	Lrrc10b (ENSPEMG00000007016) #24	Syt7 (ENSPEMG00000011295) #25	Dagla (ENSPEMG00000013710) #27	Myrf (ENSPEMG00000009821) #28	ENSPEMG00000011273 #29	Fen1 (ENSPEMG00000009788) #30	Fads1 (ENSPEMG00000008265) #31	Fads2 (ENSPEMG00000015890) #32	Fads3 (ENSPEMG00000012107) #34	Rab3il1 (ENSPEMG00000011822) #35	ENSPEMG00000012703 #36	Fth1 (ENSPEMG00000017564) ##37	ENSPEMG00000020638	Incenp (ENSPEMG00000008252)
Murinae	ANCESTRAL SPECIES		ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u
Mus	ANCESTRAL SPECIES		ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u.a
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a.g #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u.a
Steppe mouse	MODERN SPECIES	3402	Tmem109 (ENSMSIG00000030532) #8	Tmem132a (ENSMSIG00000030526) #9	Slc15a3 (ENSMSIG00000030521) #10	Cd6 (ENSMSIG00000030511) #11	ENSMSIG00000030508	Cd5 (ENSMSIG00000030505) #12	Vps37c (ENSMSIG00000030504) #13	ENSMSIG00000030503	Vwce (ENSMSIG00000030497) #15	Ddb1 (ENSMSIG00000030496) #16	Tkfc (ENSMSIG00000030492) #17	Cyb561a3 (ENSMSIG00000030489) #18	ENSMSIG00000030488 #19	ENSMSIG00000030484 #20	ENSMSIG00000030483 #21	ENSMSIG00000030481 #22	Ppp1r32 (ENSMSIG00000030477) #23	Lrrc10b (ENSMSIG00000030476) #24	Syt7 (ENSMSIG00000030431) #25
spretus	MODERN SPECIES	10	Prpf19 (MGP_SPRETEiJ_G0023618) #7	Tmem109 (MGP_SPRETEiJ_G0023617) #8	Tmem132a (MGP_SPRETEiJ_G0023616) #9	Slc15a3 (MGP_SPRETEiJ_G0023615) #10	Cd6 (MGP_SPRETEiJ_G0023614) #11	Cd5 (MGP_SPRETEiJ_G0023613) #12	Vps37c (MGP_SPRETEiJ_G0023612) #13	Pga5 (MGP_SPRETEiJ_G0023611)	Vwce (MGP_SPRETEiJ_G0023610) #15	Ddb1 (MGP_SPRETEiJ_G0023609) #16	Tkfc (MGP_SPRETEiJ_G0023608) #17	Cyb561a3 (MGP_SPRETEiJ_G0023607) #18	MGP_SPRETEiJ_G0023606 #19	Tmem216 (MGP_SPRETEiJ_G0023605) #20	Cpsf7 (MGP_SPRETEiJ_G0023604) #21	Sdhaf2 (MGP_SPRETEiJ_G0023603) #22	Ppp1r32 (MGP_SPRETEiJ_G0023602) #23	Lrrc10b (MGP_SPRETEiJ_G0023601) #24	Syt7 (MGP_SPRETEiJ_G0023600) #25	Dagla (MGP_SPRETEiJ_G0023599) #27	Myrf (MGP_SPRETEiJ_G0023598) #28	Tmem258 (MGP_SPRETEiJ_G0023597) #29	Fen1 (MGP_SPRETEiJ_G0023596) #30	Fads1 (MGP_SPRETEiJ_G0023595) #31	Fads2 (MGP_SPRETEiJ_G0023594) #32	Fads3 (MGP_SPRETEiJ_G0023593) #34	Rab3il1 (MGP_SPRETEiJ_G0023592) #35	Best1 (MGP_SPRETEiJ_G0023591) #36	Fth1 (MGP_SPRETEiJ_G0023590) ##37	Incenp (MGP_SPRETEiJ_G0023589)	Scgb2a2 (MGP_SPRETEiJ_G0023588)
Mouse	MODERN SPECIES	10	Prpf19 (ENSMUSG00000024735) #7	Tmem109 (ENSMUSG00000034659) #8	Tmem132a (ENSMUSG00000024736) #9	Slc15a3 (ENSMUSG00000024737) #10	Cd6 (ENSMUSG00000024670) #11	Cd5 (ENSMUSG00000024669) #12	Vps37c (ENSMUSG00000048832) #13	Pga5 (ENSMUSG00000024738)	Vwce (ENSMUSG00000043789) #15	Ddb1 (ENSMUSG00000024740) #16	Tkfc (ENSMUSG00000034371) #17	Cyb561a3 (ENSMUSG00000034445) #18	Tmem138 (ENSMUSG00000024666) #19	Tmem216 (ENSMUSG00000024667) #20	Cpsf7 (ENSMUSG00000034820) #21	Sdhaf2 (ENSMUSG00000024668) #22	Ppp1r32 (ENSMUSG00000035179) #23	Lrrc10b (ENSMUSG00000090291) #24	Syt7 (ENSMUSG00000024743) #25	Dagla (ENSMUSG00000035735) #27	Myrf (ENSMUSG00000036098) #28	Tmem258 (ENSMUSG00000036372) #29	Fen1 (ENSMUSG00000024742) #30	Fads1 (ENSMUSG00000010663) #31	Fads2 (ENSMUSG00000024665) #32	Fads3 (ENSMUSG00000024664) #34	Rab3il1 (ENSMUSG00000024663) #35	Best1 (ENSMUSG00000037418) #36	Fth1 (ENSMUSG00000024661) ##37	Incenp (ENSMUSG00000024660)	Scgb2a2 (ENSMUSG00000096872)
Ryukyu mouse	MODERN SPECIES	10	Prpf19 (MGP_CAROLIEiJ_G0022704) #7	Tmem109 (MGP_CAROLIEiJ_G0022703) #8	Tmem132a (MGP_CAROLIEiJ_G0022702) #9	Slc15a3 (MGP_CAROLIEiJ_G0022701) #10	Cd6 (MGP_CAROLIEiJ_G0022700) #11	Cd5 (MGP_CAROLIEiJ_G0022699) #12	Vps37c (MGP_CAROLIEiJ_G0022698) #13	Pga5 (MGP_CAROLIEiJ_G0022697)	Vwce (MGP_CAROLIEiJ_G0022696) #15	Ddb1 (MGP_CAROLIEiJ_G0022695) #16	Tkfc (MGP_CAROLIEiJ_G0022694) #17	Cyb561a3 (MGP_CAROLIEiJ_G0022693) #18	MGP_CAROLIEiJ_G0022692 #19	Tmem216 (MGP_CAROLIEiJ_G0022691) #20	Cpsf7 (MGP_CAROLIEiJ_G0022690) #21	Sdhaf2 (MGP_CAROLIEiJ_G0022689) #22	Ppp1r32 (MGP_CAROLIEiJ_G0022688) #23	Lrrc10b (MGP_CAROLIEiJ_G0022687) #24	Syt7 (MGP_CAROLIEiJ_G0022686) #25	Dagla (MGP_CAROLIEiJ_G0022685) #27	Myrf (MGP_CAROLIEiJ_G0022684) #28	Tmem258 (MGP_CAROLIEiJ_G0022683) #29	Fen1 (MGP_CAROLIEiJ_G0022682) #30	Fads1 (MGP_CAROLIEiJ_G0022681) #31	Fads2 (MGP_CAROLIEiJ_G0022680) #32	Fads3 (MGP_CAROLIEiJ_G0022679) #34	Rab3il1 (MGP_CAROLIEiJ_G0022678) #35	Best1 (MGP_CAROLIEiJ_G0022677) #36	Fth1 (MGP_CAROLIEiJ_G0022676) ##37	Incenp (MGP_CAROLIEiJ_G0022675)	Asrgl1 (MGP_CAROLIEiJ_G0022674)
Shrew mouse	MODERN SPECIES		Prpf19 (MGP_PahariEiJ_G0014198) #7	Tmem109 (MGP_PahariEiJ_G0014197) #8	Tmem132a (MGP_PahariEiJ_G0014196) #9	Slc15a3 (MGP_PahariEiJ_G0014195) #10	Cd6 (MGP_PahariEiJ_G0014194) #11	Cd5 (MGP_PahariEiJ_G0014193) #12	Vps37c (MGP_PahariEiJ_G0014192) #13	Pga5 (MGP_PahariEiJ_G0014191)	Vwce (MGP_PahariEiJ_G0014190) #15	Ddb1 (MGP_PahariEiJ_G0014189) #16	Tkfc (MGP_PahariEiJ_G0014188) #17	Cyb561a3 (MGP_PahariEiJ_G0014187) #18	MGP_PahariEiJ_G0014186 #19	Tmem216 (MGP_PahariEiJ_G0014185) #20	Cpsf7 (MGP_PahariEiJ_G0014184) #21	Sdhaf2 (MGP_PahariEiJ_G0014183) #22	Ppp1r32 (MGP_PahariEiJ_G0014182) #23	Lrrc10b (MGP_PahariEiJ_G0014181) #24	Syt7 (MGP_PahariEiJ_G0014180) #25	MGP_PahariEiJ_G0014179	Myrf (MGP_PahariEiJ_G0014178) #28	Tmem258 (MGP_PahariEiJ_G0014177) #29	Fen1 (MGP_PahariEiJ_G0014176) #30	Fads1 (MGP_PahariEiJ_G0014175) #31	Fads2 (MGP_PahariEiJ_G0014174) #32	Fads3 (MGP_PahariEiJ_G0014173) #34	Rab3il1 (MGP_PahariEiJ_G0014172) #35	Best1 (MGP_PahariEiJ_G0014171) #36	Fth1 (MGP_PahariEiJ_G0014170) ##37	Incenp (MGP_PahariEiJ_G0014169)	Asrgl1 (MGP_PahariEiJ_G0014168)
Rat	MODERN SPECIES		Zp1 (ENSRNOG00000020907)	Prpf19 (ENSRNOG00000020897) #7	Tmem109 (ENSRNOG00000028017) #8	Tmem132a (ENSRNOG00000021338) #9	Slc15a3 (ENSRNOG00000021644) #10	Cd6 (ENSRNOG00000020884) #11	Cd5 (ENSRNOG00000020872) #12	Vps37c (ENSRNOG00000046439) #13	Pga5 (ENSRNOG00000047279)	Vwce (ENSRNOG00000060269) #15	Ddb1 (ENSRNOG00000020715) #16	Tkfc (ENSRNOG00000020704) #17	Cyb561a3 (ENSRNOG00000020702) #18	Tmem216 (ENSRNOG00000020692) #20	Cpsf7 (ENSRNOG00000020668) #21	Sdhaf2 (ENSRNOG00000020646) #22	Ppp1r32 (ENSRNOG00000020620) #23	Syt7 (ENSRNOG00000026432) #25	Lrrc10b (ENSRNOG00000030180) #24	LOC108349691 (ENSRNOG00000067027)	Dagla (ENSRNOG00000027264) #27	Myrf (ENSRNOG00000028274) #28	Fen1 (ENSRNOG00000020531) #30	Fads1 (ENSRNOG00000020480) #31	Fads2 (ENSRNOG00000020440) #32	Fads3 (ENSRNOG00000020385) #34	Rab3il1 (ENSRNOG00000020349) #35	AABR07006255.1 (ENSRNOG00000036633)	Best1 (ENSRNOG00000020346) #36	Fth1 (ENSRNOG00000022619) ##37	Incenp (ENSRNOG00000032929)
Upper Galilee mountains blind mole rat	MODERN SPECIES	545														Tmem216 (ENSNGAG00000003806) #20	Cpsf7 (ENSNGAG00000005031) #21	Sdhaf2 (ENSNGAG00000011983) #22	Ppp1r32 (ENSNGAG00000018343) #23	Lrrc10b (ENSNGAG00000013736) #24	Syt7 (ENSNGAG00000013419) #25	Dagla (ENSNGAG00000021794) #27	Myrf (ENSNGAG00000021024) #28	ENSNGAG00000000579 #29	Fen1 (ENSNGAG00000000449) #30	Fads1 (ENSNGAG00000003043) #31	Fads2 (ENSNGAG00000014321) #32	Fads3 (ENSNGAG00000015661) #34	ENSNGAG00000003987 #35	ENSNGAG00000022803	ENSNGAG00000014932 ##37	Prickle2 (ENSNGAG00000020977)	Adamts9 (ENSNGAG00000023263)
Lesser Egyptian jerboa	MODERN SPECIES	145	Prpf19 (ENSJJAG00000020609) #7	Tmem109 (ENSJJAG00000019926) #8	Tmem132a (ENSJJAG00000019362) #9	Slc15a3 (ENSJJAG00000018033) #10	Cd6 (ENSJJAG00000017281) #11	Cd5 (ENSJJAG00000014422) #12	Vps37c (ENSJJAG00000013830) #13	Pga5 (ENSJJAG00000013252)	Vwce (ENSJJAG00000012536) #15	Ddb1 (ENSJJAG00000017769) #16	Tkfc (ENSJJAG00000012794) #17	Cyb561a3 (ENSJJAG00000011193) #18	Tmem138 (ENSJJAG00000007221) #19	Tmem216 (ENSJJAG00000020647) #20	Cpsf7 (ENSJJAG00000019390) #21	Sdhaf2 (ENSJJAG00000018790) #22	Ppp1r32 (ENSJJAG00000017237) #23	Lrrc10b (ENSJJAG00000013551) #24	Syt7 (ENSJJAG00000013923) #25	Dagla (ENSJJAG00000002892) #27	Myrf (ENSJJAG00000010756) #28	Tmem258 (ENSJJAG00000022691) #29	Fen1 (ENSJJAG00000012958) #30	ENSJJAG00000002498	Fads1 (ENSJJAG00000022490) #31	Fads2 (ENSJJAG00000021145) #32	Fads3 (ENSJJAG00000020671) #34	Rab3il1 (ENSJJAG00000013036) #35	ENSJJAG00000011109 #36	Fth1 (ENSJJAG00000010241) ##37	Incenp (ENSJJAG00000003541)
Kangaroo rat	MODERN SPECIES	436	Prpf19 (ENSDORG00000006906) #7	Tmem109 (ENSDORG00000006913) #8	Tmem132a (ENSDORG00000006914) #9	Slc15a3 (ENSDORG00000006915) #10	Cd6 (ENSDORG00000006488) #11	Cd5 (ENSDORG00000004114) #12	Vps37c (ENSDORG00000004117) #13	Pga5 (ENSDORG00000023368)	Vwce (ENSDORG00000000125) #15	Ddb1 (ENSDORG00000000127) #16	Tkfc (ENSDORG00000000129) #17	Cyb561a3 (ENSDORG00000000134) #18	Tmem138 (ENSDORG00000026520) #19	Tmem216 (ENSDORG00000027186) #20	ENSDORG00000000998	Sdhaf2 (ENSDORG00000001001) #22	ENSDORG00000006355 #23	Syt7 (ENSDORG00000006357) #25	Dagla (ENSDORG00000002025) #27	Myrf (ENSDORG00000002029) #28	Tmem258 (ENSDORG00000002038) #29	Fen1 (ENSDORG00000002039) #30	Fads1 (ENSDORG00000019737) #31	Fads2 (ENSDORG00000000340) #32	Fads3 (ENSDORG00000001648) #34	ENSDORG00000001649 #35	ENSDORG00000027094 #36	Fth1 (ENSDORG00000024132) ##37	Incenp (ENSDORG00000009799)	ENSDORG00000026990	Asrgl1 (ENSDORG00000014041)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p ##37	ENSGT00730000111073
Hystricomorpha	ANCESTRAL SPECIES	37	ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00940000154902.bb.b	ENSGT00950000183045.A.a.a	ENSGT00530000063866.e	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p.d ##37	ENSGT00730000111073	ENSGT00940000153747
Naked mole-rat female	MODERN SPECIES	14	EEF1G (ENSHGLG00000046941)	ENSHGLG00000034389	ENSHGLG00000037481	ENSHGLG00000035437	ENSHGLG00000038948	ENSHGLG00000029155	ENSHGLG00000046269	ENSHGLG00000033722	ENSHGLG00000002837 #15	ENSHGLG00000046341 #16	TKFC (ENSHGLG00000018883) #17	CYB561A3 (ENSHGLG00000013997) #18	ENSHGLG00000034372 #19	ENSHGLG00000038968 #20	ENSHGLG00000019090 #21	ENSHGLG00000032097 #22	LRRC10B (ENSHGLG00000020706) #24	SYT7 (ENSHGLG00000004485) #25	DAGLA (ENSHGLG00000003887) #27	ENSHGLG00000049174 #29	FEN1 (ENSHGLG00000002899) #30	ENSHGLG00000002762 #31	ENSHGLG00000048948 #34	ENSHGLG00000039242 #32	ENSHGLG00000006364 #34	ENSHGLG00000047074 #35	ENSHGLG00000004202 #36	ENSHGLG00000034974 ##37	ENSHGLG00000048559	ENSHGLG00000013374 #11	ENSHGLG00000013265 #10
Hystricomorpha_a	ANCESTRAL SPECIES	44	ENSGT00940000159921	ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00950000183045.A.a.a	ENSGT00390000013802.u	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p.d ##37	ENSGT00730000111073	ENSGT00940000153747
Guinea pig	MODERN SPECIES	65										DDB1 (ENSCPOG00000009956) #16	TKFC (ENSCPOG00000009973) #17	CYB561A3 (ENSCPOG00000019892) #18	TMEM138 (ENSCPOG00000033021) #19	TMEM216 (ENSCPOG00000009977) #20	CPSF7 (ENSCPOG00000009980) #21	SDHAF2 (ENSCPOG00000010348) #22	PPP1R32 (ENSCPOG00000012220) #23	LRRC10B (ENSCPOG00000014403) #24	SYT7 (ENSCPOG00000019369) #25	DAGLA (ENSCPOG00000012891) #27	MYRF (ENSCPOG00000013543) #28	TMEM258 (ENSCPOG00000013553) #29	FEN1 (ENSCPOG00000038134) #30	FADS1 (ENSCPOG00000037066) #31	FADS2 (ENSCPOG00000025656) #32	FADS3 (ENSCPOG00000026811) #34	RAB3IL1 (ENSCPOG00000012622) #35	BEST1 (ENSCPOG00000006105) #36	ENSCPOG00000031917 ##37	INCENP (ENSCPOG00000005701)	ENSCPOG00000023404
Hystricomorpha_b	ANCESTRAL SPECIES	80	ENSGT00940000156954	ENSGT00940000159921	ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00950000183045.A.a.a	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p.d ##37	ENSGT00730000111073	ENSGT00950000183012.A.b #13
Degu	MODERN SPECIES	320	EML3 (ENSODEG00000003455)	MTA2 (ENSODEG00000003595)	TUT1 (ENSODEG00000002204)	ENSODEG00000002254	ENSODEG00000002275	ENSODEG00000002297	ENSODEG00000002313	ENSODEG00000002333	VWCE (ENSODEG00000002356) #15	DDB1 (ENSODEG00000002419) #16	CYB561A3 (ENSODEG00000002516) #18	TKFC (ENSODEG00000002529) #17	TMEM138 (ENSODEG00000002548) #19	TMEM216 (ENSODEG00000002567) #20	CPSF7 (ENSODEG00000002610) #21	SDHAF2 (ENSODEG00000002638) #22	PPP1R32 (ENSODEG00000004127) #23	SYT7 (ENSODEG00000004157) #25	DAGLA (ENSODEG00000004222) #27	MYRF (ENSODEG00000004367) #28	TMEM258 (ENSODEG00000004598) #29	FEN1 (ENSODEG00000019408) #30	FADS1 (ENSODEG00000004630) #31	FADS2 (ENSODEG00000004705) #32	FADS3 (ENSODEG00000004765) #34	RAB3IL1 (ENSODEG00000004812) #35	ENSODEG00000004831 #36	ENSODEG00000004842 ##37	INCENP (ENSODEG00000004863)	VPS37C (ENSODEG00000004886) #13	CD5 (ENSODEG00000004906) #12
Long-tailed chinchilla	MODERN SPECIES	218								ENSCLAG00000003953	VWCE (ENSCLAG00000003291) #15	DDB1 (ENSCLAG00000004126) #16	TKFC (ENSCLAG00000003740) #17	CYB561A3 (ENSCLAG00000003653) #18	TMEM138 (ENSCLAG00000003609) #19	TMEM216 (ENSCLAG00000003298) #20	CPSF7 (ENSCLAG00000003174) #21	SDHAF2 (ENSCLAG00000013117) #22	PPP1R32 (ENSCLAG00000011656) #23	LRRC10B (ENSCLAG00000018115) #24	SYT7 (ENSCLAG00000009934) #25	DAGLA (ENSCLAG00000008252) #27	MYRF (ENSCLAG00000007140) #28	ENSCLAG00000006661 #29	FEN1 (ENSCLAG00000008656) #30	FADS1 (ENSCLAG00000008455) #31	FADS2 (ENSCLAG00000008171) #32	FADS3 (ENSCLAG00000008335) #34	RAB3IL1 (ENSCLAG00000007706) #35	BEST1 (ENSCLAG00000006972) #36	ENSCLAG00000006041 ##37	INCENP (ENSCLAG00000005037)	VPS37C (ENSCLAG00000005309) #13
Sciuridae	ANCESTRAL SPECIES	40	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.o.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.o.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37
Alpin marmot	MODERN SPECIES	3	PRPF19 (ENSMMMG00000000933) #7	TMEM109 (ENSMMMG00000000973) #8	TMEM132A (ENSMMMG00000000982) #9	SLC15A3 (ENSMMMG00000001022) #10	CD6 (ENSMMMG00000001045) #11	ENSMMMG00000001111 #12	VPS37C (ENSMMMG00000001123) #13	ENSMMMG00000001140	VWCE (ENSMMMG00000001166) #15	DDB1 (ENSMMMG00000001217) #16	TKFC (ENSMMMG00000001309) #17	CYB561A3 (ENSMMMG00000001329) #18	TMEM138 (ENSMMMG00000001348) #19	TMEM216 (ENSMMMG00000001363) #20	CPSF7 (ENSMMMG00000001401) #21	SDHAF2 (ENSMMMG00000001433) #22	PPP1R32 (ENSMMMG00000001448) #23	ENSMMMG00000001479	SYT7 (ENSMMMG00000001508) #25	DAGLA (ENSMMMG00000001711) #27	MYRF (ENSMMMG00000001773) #28	TMEM258 (ENSMMMG00000002020) #29	FEN1 (ENSMMMG00000002027) #30	ENSMMMG00000002036	FADS1 (ENSMMMG00000002044) #31	FADS2 (ENSMMMG00000002075) #32	FADS3 (ENSMMMG00000002106) #34	BEST1 (ENSMMMG00000002191) #36	ENSMMMG00000002256 ##37	ENSMMMG00000002360	ENSMMMG00000002372
Marmotini_b	ANCESTRAL SPECIES	21	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.o.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37
Squirrel	MODERN SPECIES	181	PRPF19 (ENSSTOG00000001598) #7	TMEM109 (ENSSTOG00000024268) #8	TMEM132A (ENSSTOG00000007846) #9	SLC15A3 (ENSSTOG00000007862) #10	CD6 (ENSSTOG00000007470) #11	CD5 (ENSSTOG00000026365) #12	VPS37C (ENSSTOG00000007504) #13	ENSSTOG00000023073	ENSSTOG00000007513 #15	DDB1 (ENSSTOG00000007552) #16	TKFC (ENSSTOG00000007623) #17	CYB561A3 (ENSSTOG00000007652) #18	TMEM138 (ENSSTOG00000007669) #19	TMEM216 (ENSSTOG00000020858) #20	CPSF7 (ENSSTOG00000007708) #21	SDHAF2 (ENSSTOG00000007755) #22	PPP1R32 (ENSSTOG00000007762) #23	LRRC10B (ENSSTOG00000032386) #24	SYT7 (ENSSTOG00000008542) #25	DAGLA (ENSSTOG00000013182) #27	MYRF (ENSSTOG00000000529) #28	TMEM258 (ENSSTOG00000003383) #29	ENSSTOG00000031633	FEN1 (ENSSTOG00000003387) #30	FADS1 (ENSSTOG00000003391) #31	FADS2 (ENSSTOG00000014489) #32	FADS3 (ENSSTOG00000019661) #34	RAB3IL1 (ENSSTOG00000014496) #35	BEST1 (ENSSTOG00000014508) #36	ENSSTOG00000014521 ##37	ENSSTOG00000034070
Arctic ground squirrel	MODERN SPECIES	366	PRPF19 (ENSUPAG00010004065) #7	TMEM109 (ENSUPAG00010004101) #8	TMEM132A (ENSUPAG00010004114) #9	SLC15A3 (ENSUPAG00010004134) #10	CD6 (ENSUPAG00010004151) #11	CD5 (ENSUPAG00010004200) #12	VPS37C (ENSUPAG00010004210) #13	ENSUPAG00010004227	VWCE (ENSUPAG00010004250) #15	DDB1 (ENSUPAG00010004285) #16	TKFC (ENSUPAG00010004335) #17	CYB561A3 (ENSUPAG00010004371) #18	TMEM138 (ENSUPAG00010004380) #19	TMEM216 (ENSUPAG00010004393) #20	CPSF7 (ENSUPAG00010004406) #21	ENSUPAG00010004422 #22	PPP1R32 (ENSUPAG00010004440) #23	LRRC10B (ENSUPAG00010004468) #24	SYT7 (ENSUPAG00010004474) #25	ENSUPAG00010004590	DAGLA (ENSUPAG00010004596) #27	MYRF (ENSUPAG00010004659) #28	ENSUPAG00010004772 #29	FEN1 (ENSUPAG00010004780) #30	ENSUPAG00010004784	FADS1 (ENSUPAG00010004789) #31	FADS2 (ENSUPAG00010004799) #32	ENSUPAG00010004814 #35	BEST1 (ENSUPAG00010004888) #36	ENSUPAG00010004905 ##37	INCENP (ENSUPAG00010004917)
Eurasian red squirrel	MODERN SPECIES	2	PRPF19 (ENSSVLG00005010261) #7	TMEM109 (ENSSVLG00005010210) #8	TMEM132A (ENSSVLG00005010099) #9	SLC15A3 (ENSSVLG00005010014) #10	CD6 (ENSSVLG00005009750) #11	CD5 (ENSSVLG00005009586) #12	VPS37C (ENSSVLG00005009545) #13	ENSSVLG00005009304	VWCE (ENSSVLG00005009126) #15	DDB1 (ENSSVLG00005009066) #16	TKFC (ENSSVLG00005009023) #17	CYB561A3 (ENSSVLG00005008965) #18	TMEM138 (ENSSVLG00005008948) #19	TMEM216 (ENSSVLG00005008859) #20	CPSF7 (ENSSVLG00005008784) #21	SDHAF2 (ENSSVLG00005008680) #22	PPP1R32 (ENSSVLG00005008524) #23	LRRC10B (ENSSVLG00005008474) #24	SYT7 (ENSSVLG00005007921) #25	DAGLA (ENSSVLG00005007644) #27	MYRF (ENSSVLG00005007408) #28	TMEM258 (ENSSVLG00005007336) #29	FEN1 (ENSSVLG00005007324) #30	ENSSVLG00005007308	FADS1 (ENSSVLG00005007252) #31	FADS2 (ENSSVLG00005007178) #32	FADS3 (ENSSVLG00005007116) #34	RAB3IL1 (ENSSVLG00005006928) #35	BEST1 (ENSSVLG00005006784) #36	ENSSVLG00005006740 ##37	ENSSVLG00005006675
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000001149 #22
Hedgehog	MODERN SPECIES	6288																SDHAF2 (ENSEEUG00000002015) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d	ENSGT00940000153747.c.a.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Suina	ANCESTRAL SPECIES	14	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d.a.b.a	ENSGT00940000153747.d.a.a.a	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.a.c.b ##37	ENSGT00730000111073
Chacoan peccary	MODERN SPECIES	919	ENSCWAG00000021858	ENSCWAG00000021852	ENSCWAG00000021846	ENSCWAG00000021842	ENSCWAG00000021840	ENSCWAG00000021838	ENSCWAG00000021833	ENSCWAG00000021825 #14	VWCE (ENSCWAG00000021797) #15	DDB1 (ENSCWAG00000021785) #16	TKFC (ENSCWAG00000021771) #17	CYB561A3 (ENSCWAG00000021759) #18	TMEM138 (ENSCWAG00000021754) #19	TMEM216 (ENSCWAG00000021749) #20	CPSF7 (ENSCWAG00000021742) #21	SDHAF2 (ENSCWAG00000021735) #22	PPP1R32 (ENSCWAG00000021723) #23	LRRC10B (ENSCWAG00000021722) #24	SYT7 (ENSCWAG00000021581) #25	DAGLA (ENSCWAG00000021546) #27
Pig	MODERN SPECIES	10	ENSSSCG00000001005	PPAG3 (ENSSSCG00000013096)	ENSSSCG00000048235	ENSSSCG00000026060	ENSSSCG00000013090	ENSSSCG00000058512	ENSSSCG00000052816	PGA5 (ENSSSCG00000013092) #14	VWCE (ENSSSCG00000013093) #15	DDB1 (ENSSSCG00000013094) #16	TKFC (ENSSSCG00000013087) #17	CYB561A3 (ENSSSCG00000013086) #18	TMEM138 (ENSSSCG00000037843) #19	TMEM216 (ENSSSCG00000013084) #20	CPSF7 (ENSSSCG00000013083) #21	SDHAF2 (ENSSSCG00000013082) #22	ENSSSCG00000050990	LRRC10B (ENSSSCG00000013088) #24	SYT7 (ENSSSCG00000021906) #25	DAGLA (ENSSSCG00000013079) #27	ENSSSCG00000013078 #28	TMEM258 (ENSSSCG00000027538) #29	FEN1 (ENSSSCG00000063433) #30	FADS1 (ENSSSCG00000024015) #31	FADS2 (ENSSSCG00000013072) #32	FADS3 (ENSSSCG00000013073) #34	RAB3IL1 (ENSSSCG00000013074) #35	BEST1 (ENSSSCG00000023090) #36	ENSSSCG00000014540 ##37	INCENP (ENSSSCG00000013066)	SCGB1D1 (ENSSSCG00000013068)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d	ENSGT00940000153747.c.a.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.c.a.a	ENSGT00940000153747.d	ENSGT00940000153747.c.a.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b ##37	ENSGT00730000111073
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.h #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.n.b ##37	ENSGT00390000009588.nb
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.h #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a ##37	ENSGT00390000009588.nb
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.h #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.b.a.b ##34	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a ##37
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d.e	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.h #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a ##37	ENSGT00390000009588.nb
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d.e	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.h #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a ##37	ENSGT00390000009588.nb
Narwhal	MODERN SPECIES	314	PRPF19 (ENSMMNG00015017071) #7	TMEM109 (ENSMMNG00015017107) #8	TMEM132A (ENSMMNG00015017145) #9	SLC15A3 (ENSMMNG00015017156) #10	CD6 (ENSMMNG00015017194) #11	CD5 (ENSMMNG00015017263) #12	VPS37C (ENSMMNG00015017302) #13	ENSMMNG00015017329 #14	VWCE (ENSMMNG00015017386) #15	DDB1 (ENSMMNG00015017421) #16	TKFC (ENSMMNG00015017547) #17	CYB561A3 (ENSMMNG00015017602) #18	TMEM138 (ENSMMNG00015017644) #19	ENSMMNG00015017662 #20	CPSF7 (ENSMMNG00015017720) #21	SDHAF2 (ENSMMNG00015017763) #22	PPP1R32 (ENSMMNG00015017820) #23	LRRC10B (ENSMMNG00015017915) #24	SYT7 (ENSMMNG00015018005) #25	DAGLA (ENSMMNG00015018165) #27	MYRF (ENSMMNG00015018267) #28	ENSMMNG00015018376 #29	FEN1 (ENSMMNG00015018398) #30	ENSMMNG00015018407	FADS1 (ENSMMNG00015018422) #31	FADS2 (ENSMMNG00015018459) #32	FADS3 (ENSMMNG00015018534) #34	RAB3IL1 (ENSMMNG00015018609) #35	BEST1 (ENSMMNG00015018677) #36	ENSMMNG00015018730 ##37	ENSMMNG00015018773
Beluga whale	MODERN SPECIES	7	TMEM132A (ENSDLEG00000001440) #9	SLC15A3 (ENSDLEG00000001432) #10	CD6 (ENSDLEG00000001412) #11	CD5 (ENSDLEG00000001394) #12	VPS37C (ENSDLEG00000001384) #13	ENSDLEG00000001363	PGA5 (ENSDLEG00000001340) #14	VWCE (ENSDLEG00000001246) #15	DDB1 (ENSDLEG00000001179) #16	TKFC (ENSDLEG00000000962) #17	CYB561A3 (ENSDLEG00000000930) #18	TMEM138 (ENSDLEG00000000919) #19	ENSDLEG00000000898 #20	ENSDLEG00000000886 #21	ENSDLEG00000000879 #21	SDHAF2 (ENSDLEG00000000871) #22	PPP1R32 (ENSDLEG00000000838) #23	LRRC10B (ENSDLEG00000000828) #24	SYT7 (ENSDLEG00000000798) #25	DAGLA (ENSDLEG00000000737) #27	MYRF (ENSDLEG00000000555) #28	ENSDLEG00000000496 #29	FEN1 (ENSDLEG00000000484) #30	ENSDLEG00000000478	ENSDLEG00000000465 ##34	FADS2 (ENSDLEG00000000450) #32	FADS3 (ENSDLEG00000000318) #34	RAB3IL1 (ENSDLEG00000000259) #35	ENSDLEG00000000215 #36	FTH1 (ENSDLEG00000000166) ##37	ENSDLEG00000000149
Vaquita	MODERN SPECIES	19	TMEM132A (ENSPSNG00000011164) #9	SLC15A3 (ENSPSNG00000011241) #10	CD6 (ENSPSNG00000011358) #11	CD5 (ENSPSNG00000012012) #12	VPS37C (ENSPSNG00000012121) #13	ENSPSNG00000012177	ENSPSNG00000012371	ENSPSNG00000012502 #14	VWCE (ENSPSNG00000012655) #15	DDB1 (ENSPSNG00000012899) #16	TKFC (ENSPSNG00000012988) #17	CYB561A3 (ENSPSNG00000013060) #18	TMEM138 (ENSPSNG00000013156) #19	ENSPSNG00000013236 #20	CPSF7 (ENSPSNG00000013407) #21	SDHAF2 (ENSPSNG00000013585) #22	PPP1R32 (ENSPSNG00000013764) #23	LRRC10B (ENSPSNG00000014099) #24	SYT7 (ENSPSNG00000014330) #25	DAGLA (ENSPSNG00000015388) #27	MYRF (ENSPSNG00000015696) #28	TMEM258 (ENSPSNG00000016151) #29	FEN1 (ENSPSNG00000016213) #30	ENSPSNG00000016241	FADS1 (ENSPSNG00000016302) #31	FADS2 (ENSPSNG00000016437) #32	FADS3 (ENSPSNG00000016702) #34	RAB3IL1 (ENSPSNG00000016838) #35	ENSPSNG00000017070 #36	ENSPSNG00000017157	INCENP (ENSPSNG00000017213)
Dolphin	MODERN SPECIES	2213								ENSTTRG00000010998 #14	VWCE (ENSTTRG00000011037) #15	DDB1 (ENSTTRG00000011055) #16	TKFC (ENSTTRG00000011075) #17	CYB561A3 (ENSTTRG00000011080) #18	TMEM138 (ENSTTRG00000011081) #19	TMEM216 (ENSTTRG00000011084) #20	CPSF7 (ENSTTRG00000011085) #21	SDHAF2 (ENSTTRG00000011093) #22	PPP1R32 (ENSTTRG00000011096) #23
Sperm whale	MODERN SPECIES	7	CBLIF (ENSPCTG00005005636)	TCN1 (ENSPCTG00005005688)	ENSPCTG00005005717	ENSPCTG00005005730	MS4A2 (ENSPCTG00005005762)	MS4A1 (ENSPCTG00005005858)	ENSPCTG00005005912	CD6 (ENSPCTG00005006147) #11	VPS37C (ENSPCTG00005006455) #13	ENSPCTG00005006468	ENSPCTG00005006515	CYB561A3 (ENSPCTG00005006609) #18	TMEM138 (ENSPCTG00005006640) #19	TMEM216 (ENSPCTG00005006683) #20	CPSF7 (ENSPCTG00005006786) #21	SDHAF2 (ENSPCTG00005006914) #22	PPP1R32 (ENSPCTG00005006983) #23	LRRC10B (ENSPCTG00005007103) #24	SYT7 (ENSPCTG00005007241) #25	FADS2 (ENSPCTG00005008356) #32	FADS1 (ENSPCTG00005008419) #31	ENSPCTG00005008459	FEN1 (ENSPCTG00005008477) #30	TMEM258 (ENSPCTG00005008491) #29	MYRF (ENSPCTG00005008529) #28	ENSPCTG00005008871 #36	RAB3IL1 (ENSPCTG00005008916) #35	ENSPCTG00005009299	INCENP (ENSPCTG00005009388)	ENSPCTG00005009578	ENSPCTG00005009626
Blue whale	MODERN SPECIES	19	TMEM132A (ENSBMSG00010007378) #9	SLC15A3 (ENSBMSG00010007396) #10	CD6 (ENSBMSG00010007444) #11	CD5 (ENSBMSG00010007513) #12	VPS37C (ENSBMSG00010007601) #13	ENSBMSG00010007613	ENSBMSG00010007627	ENSBMSG00010007648 #14	VWCE (ENSBMSG00010007667) #15	DDB1 (ENSBMSG00010007697) #16	TKFC (ENSBMSG00010007745) #17	CYB561A3 (ENSBMSG00010007763) #18	TMEM138 (ENSBMSG00010007779) #19	TMEM216 (ENSBMSG00010007791) #20	CPSF7 (ENSBMSG00010007817) #21	SDHAF2 (ENSBMSG00010007854) #22	PPP1R32 (ENSBMSG00010007880) #23	LRRC10B (ENSBMSG00010007904) #24	SYT7 (ENSBMSG00010007963) #25	DAGLA (ENSBMSG00010008009) #27	MYRF (ENSBMSG00010008041) #28	ENSBMSG00010008083 #29	FEN1 (ENSBMSG00010007261) #30	ENSBMSG00010007270	FADS1 (ENSBMSG00010007282) #31	FADS2 (ENSBMSG00010007330) #32	ENSBMSG00010007377 #34	RAB3IL1 (ENSBMSG00010007458) #35	BEST1 (ENSBMSG00010007587) #36	ENSBMSG00010007637 ##37	ENSBMSG00010007674
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.c.a.a.a	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.b ##37	ENSGT00730000111073
Yarkand deer	MODERN SPECIES	11	ENSCHYG00000008398	ENSCHYG00000008477	ENSCHYG00000008525	ENSCHYG00000008537	ENSCHYG00000008602	ENSCHYG00000008622	ENSCHYG00000008674	ENSCHYG00000008738 #14	VWCE (ENSCHYG00000008847) #15	DDB1 (ENSCHYG00000008990) #16	TKFC (ENSCHYG00000009565) #17	CYB561A3 (ENSCHYG00000009714) #18	ENSCHYG00000009852 #19	TMEM216 (ENSCHYG00000009986) #20	CPSF7 (ENSCHYG00000010078) #21	SDHAF2 (ENSCHYG00000010299) #22	PPP1R32 (ENSCHYG00000010513) #23	LRRC10B (ENSCHYG00000010729) #24	SYT7 (ENSCHYG00000010777) #25	DAGLA (ENSCHYG00000011343) #27	MYRF (ENSCHYG00000011601) #28	ENSCHYG00000012385 ##29	FEN1 (ENSCHYG00000012431) #30	ENSCHYG00000012454	FADS1 (ENSCHYG00000012487) #31	ENSCHYG00000012672 #32	FADS3 (ENSCHYG00000013278) #34	RAB3IL1 (ENSCHYG00000013498) #35	BEST1 (ENSCHYG00000014024) #36	ENSCHYG00000014166 ##37	ENSCHYG00000014297
Percora_a	ANCESTRAL SPECIES	16	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.c.a.a.a	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b ##37	ENSGT00730000111073
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.c.a.a.a	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##37	ENSGT00730000111073
Caprinae	ANCESTRAL SPECIES	20			ENSGT00940000153747.c.b.a.b.b.b.a.a.a.a.a.b.a.a.a.b	ENSGT00940000153747.c.b.a.a.b	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##37	ENSGT00730000111073
Goat	MODERN SPECIES	21	APOOL (ENSCHIG00000009190)	ENSCHIG00000015641	PAG-2 (ENSCHIG00000020849)	ENSCHIG00000011963	ENSCHIG00000007600	ENSCHIG00000016744	PAG-8 (ENSCHIG00000024659)	ENSCHIG00000016267 #14	VWCE (ENSCHIG00000025655) #15	DDB1 (ENSCHIG00000014969) #16	TKFC (ENSCHIG00000022752) #17	CYB561A3 (ENSCHIG00000012169) #18	TMEM138 (ENSCHIG00000017453) #19	TMEM216 (ENSCHIG00000023674) #20	CPSF7 (ENSCHIG00000014655) #21	SDHAF2 (ENSCHIG00000023310) #22	PPP1R32 (ENSCHIG00000012512) #23	LRRC10B (ENSCHIG00000001840) #24	SYT7 (ENSCHIG00000009808) #25	DAGLA (ENSCHIG00000020106) #27	MYRF (ENSCHIG00000003036) #28	ENSCHIG00000018241 ##29	FEN1 (ENSCHIG00000009155) #30	ENSCHIG00000013437	FADS1 (ENSCHIG00000022314) #31	ENSCHIG00000015460 #32	FADS3 (ENSCHIG00000026956) #34	RAB3IL1 (ENSCHIG00000018161) #35	BEST1 (ENSCHIG00000005599) #36	FTH1 (ENSCHIG00000018949) ##37	INCENP (ENSCHIG00000023449)
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020021020	ENSOARG00020021107	PAG6 (ENSOARG00020021174)	ENSOARG00020021269	ENSOARG00020021295	ENSOARG00020021356	ENSOARG00020021461	ENSOARG00020021518	ENSOARG00020021557 #14	DDB1 (ENSOARG00020012642) #16	TKFC (ENSOARG00020012889) #17	CYB561A3 (ENSOARG00020013047) #18	TMEM138 (ENSOARG00020013156) #19	TMEM216 (ENSOARG00020013196) #20	CPSF7 (ENSOARG00020013322) #21	SDHAF2 (ENSOARG00020013473) #22	PPP1R32 (ENSOARG00020013625) #23	LRRC10B (ENSOARG00020013826) #24	SYT7 (ENSOARG00020013930) #25	DAGLA (ENSOARG00020016399) #27	MYRF (ENSOARG00020016571) #28	ENSOARG00020017205 ##29	FEN1 (ENSOARG00020017260) #30	ENSOARG00020017287	FADS1 (ENSOARG00020017320) #31	ENSOARG00020017431 #32	FADS3 (ENSOARG00020017693) #34	RAB3IL1 (ENSOARG00020017922) #35	BEST1 (ENSOARG00020018322) #36	FTH1 (ENSOARG00020018402) ##37	INCENP (ENSOARG00020018586)
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000153747.c.b.a.b.b.b.a.a.a.a.a.b.b.a	ENSGT00940000153747.c.b.a.b.b.b.a.a.a.a.a.b.a.a.b.a.b	ENSGT00940000153747.c.b.a.a.b	ENSGT00940000164310.e	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##37	ENSGT00730000111073
Bos	ANCESTRAL SPECIES	11	ENSGT00940000153747.c.b.a.b.b.b.a.a.a.a.a.b.a.a.b.a.b	ENSGT00940000153747.c.b.a.a.b	ENSGT00940000164310.e	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a ##37	ENSGT00730000111073
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000153747.c.b.a.a.b	ENSGT00940000164310.e	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.b.b.b.a.a.a.a	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.e.b ##29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a ##37	ENSGT00730000111073
Cow	MODERN SPECIES	21	PAG11 (ENSBTAG00000022759)	ENSBTAG00000031483	ENSBTAG00000013214	ENSBTAG00000040257	ENSBTAG00000051501	PAG8 (ENSBTAG00000019226)	PGA5 (ENSBTAG00000014761) #14	VWCE (ENSBTAG00000021568) #15	DDB1 (ENSBTAG00000021569) #16	TKFC (ENSBTAG00000018201) #17	CYB561A3 (ENSBTAG00000018202) #18	TMEM138 (ENSBTAG00000021604) #19	ENSBTAG00000053752	TMEM216 (ENSBTAG00000021517) #20	CPSF7 (ENSBTAG00000015263) #21	SDHAF2 (ENSBTAG00000015266) #22	PPP1R32 (ENSBTAG00000014830) #23	LRRC10B (ENSBTAG00000047786) #24	SYT7 (ENSBTAG00000019947) #25	ENSBTAG00000048988	DAGLA (ENSBTAG00000013942) #27	MYRF (ENSBTAG00000006990) #28	TMEM258 (ENSBTAG00000032557) ##29	FEN1 (ENSBTAG00000000064) #30	ENSBTAG00000053898	FADS1 (ENSBTAG00000022294) #31	FADS2 (ENSBTAG00000015505) #32	FADS3 (ENSBTAG00000015511) #34	RAB3IL1 (ENSBTAG00000015745) #35	BEST1 (ENSBTAG00000011186) #36	FTH1 (ENSBTAG00000011184) ##37
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005009211	ENSBIXG00005009268	ENSBIXG00005009294	ENSBIXG00005009315	ENSBIXG00005009319	ENSBIXG00005009328	ENSBIXG00005000485	ENSBIXG00005009365 #14	DDB1 (ENSBIXG00005009414) #16	TKFC (ENSBIXG00005000509) #17	CYB561A3 (ENSBIXG00005000536) #18	TMEM138 (ENSBIXG00005009582) #19	ENSBIXG00005009590	TMEM216 (ENSBIXG00005009610) #20	CPSF7 (ENSBIXG00005009640) #21	SDHAF2 (ENSBIXG00005007414) #22	PPP1R32 (ENSBIXG00005005369) #23	LRRC10B (ENSBIXG00005006411) #24	ENSBIXG00005007419	SYT7 (ENSBIXG00005009873) #25	DAGLA (ENSBIXG00005009918) #27	MYRF (ENSBIXG00005000732) #28	TMEM258 (ENSBIXG00005010011) ##29	FEN1 (ENSBIXG00005010025) #30	FADS1 (ENSBIXG00005010078) #31	ENSBIXG00005010140 #32	FADS3 (ENSBIXG00005000842) #34	ENSBIXG00005010391 #35	BEST1 (ENSBIXG00005010422) #36	ENSBIXG00005000888 ##37	INCENP (ENSBIXG00005010485)
Bos_a	ANCESTRAL SPECIES	116											ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a.e #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00960000190824	ENSGT00940000157180 #25	ENSGT00940000161192 #27
Wild yak	MODERN SPECIES	2517											TKFC (ENSBMUG00000026634) #17	CYB561A3 (ENSBMUG00000026633) #18	TMEM138 (ENSBMUG00000026632) #19	ENSBMUG00000026631 #20	CPSF7 (ENSBMUG00000026630) #21	SDHAF2 (ENSBMUG00000026629) #22	PPP1R32 (ENSBMUG00000026627) #23	ENSBMUG00000026626	SYT7 (ENSBMUG00000026625) #25	DAGLA (ENSBMUG00000026624) #27
American bison	MODERN SPECIES	3248															CPSF7 (ENSBBBG00000007316) #21	SDHAF2 (ENSBBBG00000018568) #22	PPP1R32 (ENSBBBG00000018608) #23	ENSBBBG00000018615	SYT7 (ENSBBBG00000009146) #25	DAGLA (ENSBBBG00000004679) #27	ENSBBBG00000009148 #28	ENSBBBG00000004696 ##29	FEN1 (ENSBBBG00000008945) #30	FADS1 (ENSBBBG00000018803) #31	ENSBBBG00000004767 #32	FADS3 (ENSBBBG00000018899) #34	RAB3IL1 (ENSBBBG00000018902) #35	BEST1 (ENSBBBG00000004787) #36	ENSBBBG00000018919 ##37	INCENP (ENSBBBG00000018936)	ENSBBBG00000004805
Siberian musk deer	MODERN SPECIES	1224	ENSMMSG00000013490	ENSMMSG00000013436	ENSMMSG00000013417	ENSMMSG00000013209	ENSMMSG00000013178	ENSMMSG00000015215	ENSMMSG00000015159	ENSMMSG00000015100 #14	VWCE (ENSMMSG00000015060) #15	DDB1 (ENSMMSG00000014990) #16	TKFC (ENSMMSG00000014953) #17	CYB561A3 (ENSMMSG00000014925) #18	TMEM138 (ENSMMSG00000014906) #19	TMEM216 (ENSMMSG00000014877) #20	CPSF7 (ENSMMSG00000014827) #21	SDHAF2 (ENSMMSG00000014730) #22	PPP1R32 (ENSMMSG00000014635) #23	LRRC10B (ENSMMSG00000014610) #24	SYT7 (ENSMMSG00000014430) #25	DAGLA (ENSMMSG00000014359) #27	MYRF (ENSMMSG00000014220) #28	ENSMMSG00000014177 ##29	FEN1 (ENSMMSG00000014163) #30	ENSMMSG00000014149	FADS1 (ENSMMSG00000014104) #31	ENSMMSG00000014017 #32	FADS3 (ENSMMSG00000013946) #34	RAB3IL1 (ENSMMSG00000013829) #35	BEST1 (ENSMMSG00000013766) #36	ENSMMSG00000013740 ##37	INCENP (ENSMMSG00000013713)
Camelidae	ANCESTRAL SPECIES	55	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747.d	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866
Alpaca	MODERN SPECIES	1794									ENSVPAG00000007962 #15	DDB1 (ENSVPAG00000007963) #16	TKFC (ENSVPAG00000007964) #17	CYB561A3 (ENSVPAG00000007965) #18	TMEM138 (ENSVPAG00000007966) #19	TMEM216 (ENSVPAG00000007967) #20	CPSF7 (ENSVPAG00000007968) #21	SDHAF2 (ENSVPAG00000007969) #22
Arabian camel	MODERN SPECIES	1	TMEM109 (ENSCDRG00005011305) #8	TMEM132A (ENSCDRG00005011192) #9	SLC15A3 (ENSCDRG00005011095) #10	CD6 (ENSCDRG00005010861) #11	CD5 (ENSCDRG00005010745) #12	VPS37C (ENSCDRG00005010715) #13	ENSCDRG00005009895	ENSCDRG00005009757 #14	VWCE (ENSCDRG00005009470) #15	DDB1 (ENSCDRG00005009299) #16	TKFC (ENSCDRG00005009206) #17	CYB561A3 (ENSCDRG00005009063) #18	TMEM138 (ENSCDRG00005008983) #19	TMEM216 (ENSCDRG00005008866) #20	CPSF7 (ENSCDRG00005008728) #21	SDHAF2 (ENSCDRG00005008552) #22	PPP1R32 (ENSCDRG00005008448) #23	LRRC10B (ENSCDRG00005008413) #24	SYT7 (ENSCDRG00005008063) #25	DAGLA (ENSCDRG00005007887) #27	MYRF (ENSCDRG00005007517) #28	ENSCDRG00005007463 #29	FEN1 (ENSCDRG00005007453) #30	ENSCDRG00005007415	FADS1 (ENSCDRG00005007329) #31	FADS2 (ENSCDRG00005007121) #32	RAB3IL1 (ENSCDRG00005006782) #35	BEST1 (ENSCDRG00005006707) #36	ENSCDRG00005006575 ##37	INCENP (ENSCDRG00005006531)	ENSCDRG00005006491
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Carnivora	ANCESTRAL SPECIES	7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Caniformia	ANCESTRAL SPECIES	21	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073
Ursus	ANCESTRAL SPECIES	63	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00950000185314	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073
American black bear	MODERN SPECIES	338	TMEM132A (ENSUAMG00000017706) #9	SLC15A3 (ENSUAMG00000017707) #10	ENSUAMG00000017709	CD6 (ENSUAMG00000017710) #11	CD5 (ENSUAMG00000017778) #12	VPS37C (ENSUAMG00000017782) #13	ENSUAMG00000017784	ENSUAMG00000017787 #14	VWCE (ENSUAMG00000017790) #15	DDB1 (ENSUAMG00000017793) #16	TKFC (ENSUAMG00000017799) #17	CYB561A3 (ENSUAMG00000017801) #18	ENSUAMG00000017803 #19	TMEM216 (ENSUAMG00000017806) #20	CPSF7 (ENSUAMG00000017809) #21	SDHAF2 (ENSUAMG00000017813) #22	PPP1R32 (ENSUAMG00000017815) #23	LRRC10B (ENSUAMG00000017816) #24	SYT7 (ENSUAMG00000017819) #25
Polar bear	MODERN SPECIES	303	PRPF19 (ENSUMAG00000011609) #7	TMEM109 (ENSUMAG00000011619) #8	SLC15A3 (ENSUMAG00000011637) #10	ENSUMAG00000011644	CD6 (ENSUMAG00000011656) #11	CD5 (ENSUMAG00000011691) #12	ENSUMAG00000011703	ENSUMAG00000011719 #14	VWCE (ENSUMAG00000011764) #15	DDB1 (ENSUMAG00000011788) #16	TKFC (ENSUMAG00000011802) #17	CYB561A3 (ENSUMAG00000011814) #18	ENSUMAG00000011817 #19	TMEM216 (ENSUMAG00000011822) #20	CPSF7 (ENSUMAG00000011825) #21	SDHAF2 (ENSUMAG00000011828) #22	PPP1R32 (ENSUMAG00000011831) #23	ENSUMAG00000011841 #25	DAGLA (ENSUMAG00000011871) #27	MYRF (ENSUMAG00000012005) #28	TMEM258 (ENSUMAG00000012032) #29	FEN1 (ENSUMAG00000012034) #30	ENSUMAG00000012035	FADS1 (ENSUMAG00000012081) #31	FADS2 (ENSUMAG00000012446) #32	ENSUMAG00000012456 #34	ENSUMAG00000012469 #34	BEST1 (ENSUMAG00000012478) #36	ENSUMAG00000012499 ##37	ENSUMAG00000012516	ENSUMAG00000012520
Giant Panda	MODERN SPECIES	7	PRPF19 (ENSAMEG00000007375) #7	TMEM132A (ENSAMEG00000007424) #9	SLC15A3 (ENSAMEG00000007463) #10	CD6 (ENSAMEG00000007493) #11	ENSAMEG00000007547 #12	VPS37C (ENSAMEG00000007566) #13	ENSAMEG00000007574	ENSAMEG00000007610 #14	VWCE (ENSAMEG00000025131) #15	DDB1 (ENSAMEG00000016518) #16	TKFC (ENSAMEG00000016560) #17	CYB561A3 (ENSAMEG00000016579) #18	TMEM138 (ENSAMEG00000016585) #19	TMEM216 (ENSAMEG00000016592) #20	CPSF7 (ENSAMEG00000016595) #21	SDHAF2 (ENSAMEG00000016609) #22	PPP1R32 (ENSAMEG00000016613) #23	LRRC10B (ENSAMEG00000016619) #24	SYT7 (ENSAMEG00000016620) #25	DAGLA (ENSAMEG00000016637) #27	MYRF (ENSAMEG00000016669) #28	ENSAMEG00000016694 #29	ENSAMEG00000027333	FADS1 (ENSAMEG00000016696) #31	ENSAMEG00000016725 #32	FADS3 (ENSAMEG00000016772) #34	RAB3IL1 (ENSAMEG00000016803) #35	BEST1 (ENSAMEG00000016808) #36	ENSAMEG00000016831 ##37	INCENP (ENSAMEG00000016838)	ENSAMEG00000030118
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073	ENSGT00530000063866.j.a
American mink	MODERN SPECIES	215	TMEM109 (ENSNVIG00000022068) #8	TMEM132A (ENSNVIG00000022055) #9	SLC15A3 (ENSNVIG00000022044) #10	CD6 (ENSNVIG00000021998) #11	CD5 (ENSNVIG00000021949) #12	VPS37C (ENSNVIG00000021937) #13	ENSNVIG00000021860	ENSNVIG00000021821 #14	VWCE (ENSNVIG00000021787) #15	DDB1 (ENSNVIG00000021765) #16	TKFC (ENSNVIG00000021722) #17	CYAC3 (ENSNVIG00000021701) #18	TMEM138 (ENSNVIG00000021692) #19	TMEM216 (ENSNVIG00000021679) #20	CPSF7 (ENSNVIG00000021658) #21	SDHAF2 (ENSNVIG00000021634) #22	PPP1R32 (ENSNVIG00000021597) #23	LRRC10B (ENSNVIG00000021593) #24	SYT7 (ENSNVIG00000021572) #25	DAGLA (ENSNVIG00000021552) #27	MYRF (ENSNVIG00000021484) #28	TMEM258 (ENSNVIG00000021475) #29	FEN1 (ENSNVIG00000021470) #30	ENSNVIG00000021464	FADS2 (ENSNVIG00000021440) #32	FADS3 (ENSNVIG00000021398) #34	R3GEF (ENSNVIG00000021368) #35	BEST1 (ENSNVIG00000021351) #36	ENSNVIG00000021327 ##37	INCENP (ENSNVIG00000021280)	ENSNVIG00000021274
Ferret	MODERN SPECIES	314	TMEM109 (ENSMPUG00000014425) #8	TMEM132A (ENSMPUG00000014420) #9	SLC15A3 (ENSMPUG00000014389) #10	CD6 (ENSMPUG00000014383) #11	CD5 (ENSMPUG00000014379) #12	VPS37C (ENSMPUG00000014366) #13	ENSMPUG00000014331	ENSMPUG00000014296 #14	VWCE (ENSMPUG00000014287) #15	DDB1 (ENSMPUG00000014200) #16	TKFC (ENSMPUG00000014193) #17	CYB561A3 (ENSMPUG00000014186) #18	TMEM138 (ENSMPUG00000014175) #19	TMEM216 (ENSMPUG00000014169) #20	CPSF7 (ENSMPUG00000014163) #21	SDHAF2 (ENSMPUG00000014160) #22	PPP1R32 (ENSMPUG00000014156) #23	LRRC10B (ENSMPUG00000019998) #24	SYT7 (ENSMPUG00000014150) #25	DAGLA (ENSMPUG00000014142) #27	MYRF (ENSMPUG00000014126) #28	FEN1 (ENSMPUG00000019996) #30	FADS1 (ENSMPUG00000014112) #31	FADS2 (ENSMPUG00000014108) #32	FADS3 (ENSMPUG00000014102) #34	RAB3IL1 (ENSMPUG00000014075) #35	BEST1 (ENSMPUG00000014068) #36	ENSMPUG00000014030 ##37	ENSMPUG00000014017	INCENP (ENSMPUG00000014015)	ENSMPUG00000014011
Canidae	ANCESTRAL SPECIES	13	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00520000061410	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587.c.b #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00520000061410	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Dog	MODERN SPECIES	9	PRPF19 (ENSCAFG00845018058) #7	TMEM109 (ENSCAFG00845017975) #8	TMEM132A (ENSCAFG00845017683) #9	CD6 (ENSCAFG00845017424) #11	CD5 (ENSCAFG00845017238) #12	VPS37C (ENSCAFG00845013390) #13	ENSCAFG00845013368	PGA (ENSCAFG00845013325) #14	VWCE (ENSCAFG00845013171) #15	DDB1 (ENSCAFG00845012984) #16	TKFC (ENSCAFG00845012900) #17	CYB561A3 (ENSCAFG00845012835) #18	TMEM138 (ENSCAFG00845012773) #19	TMEM216 (ENSCAFG00845012699) #20	CPSF7 (ENSCAFG00845012575) #21	SDHAF2 (ENSCAFG00845012426) #22	PPP1R32 (ENSCAFG00845012352) #23	SYT7 (ENSCAFG00845012011) #25	DAGLA (ENSCAFG00845011816) #27	MYRF (ENSCAFG00845011527) #28	TMEM258 (ENSCAFG00845011383) #29	ENSCAFG00845011360	FEN1 (ENSCAFG00845011341) #30	FADS1 (ENSCAFG00845011265) #31	FADS2 (ENSCAFG00845011145) #32	FADS3 (ENSCAFG00845010971) #34	RAB3IL1 (ENSCAFG00845010751) #35	BEST1 (ENSCAFG00845010439) #36	ENSCAFG00845010380 ##37	INCENP (ENSCAFG00845010188)	ENSCAFG00845010134
Dingo	MODERN SPECIES	36	PRPF19 (ENSCAFG00020012565) #7	TMEM109 (ENSCAFG00020012570) #8	TMEM132A (ENSCAFG00020012571) #9	CD6 (ENSCAFG00020012579) #11	CD5 (ENSCAFG00020012684) #12	VPS37C (ENSCAFG00020012691) #13	ENSCAFG00020012695	ENSCAFG00020012700 #14	ENSCAFG00020012718 #15	DDB1 (ENSCAFG00020012722) #16	TKFC (ENSCAFG00020012731) #17	CYB561A3 (ENSCAFG00020012743) #18	TMEM138 (ENSCAFG00020012745) #19	TMEM216 (ENSCAFG00020012747) #20	CPSF7 (ENSCAFG00020012753) #21	SDHAF2 (ENSCAFG00020012759) #22	PPP1R32 (ENSCAFG00020012763) #23	LRRC10B (ENSCAFG00020012772) #24	SYT7 (ENSCAFG00020012774) #25	DAGLA (ENSCAFG00020012782) #27	ENSCAFG00020012846 #28	ENSCAFG00020012853 #29	ENSCAFG00020012857	FADS1 (ENSCAFG00020012860) #31	FADS2 (ENSCAFG00020012907) #32	FADS3 (ENSCAFG00020012916) #34	RAB3IL1 (ENSCAFG00020012943) #35	BEST1 (ENSCAFG00020012953) #36	ENSCAFG00020012965 ##37	INCENP (ENSCAFG00020012970)	ENSCAFG00020012987
Red fox	MODERN SPECIES	249	TMEM132A (ENSVVUG00000005243) #9	SLC15A3 (ENSVVUG00000005240) #10	CD6 (ENSVVUG00000005070) #11	CD5 (ENSVVUG00000005055) #12	VPS37C (ENSVVUG00000005046) #13	ENSVVUG00000005041	ENSVVUG00000005020 #14	VWCE (ENSVVUG00000005012) #15	DDB1 (ENSVVUG00000004987) #16	TKFC (ENSVVUG00000004965) #17	CYB561A3 (ENSVVUG00000004953) #18	ENSVVUG00000004952 #19	TMEM216 (ENSVVUG00000004944) #20	CPSF7 (ENSVVUG00000004939) #21	ENSVVUG00000004934	SDHAF2 (ENSVVUG00000004927) #22	PPP1R32 (ENSVVUG00000004912) #23	LRRC10B (ENSVVUG00000004899) #24	SYT7 (ENSVVUG00000004869) #25	DAGLA (ENSVVUG00000004253) #27	MYRF (ENSVVUG00000004193) #28	ENSVVUG00000004180 #29	MYRF (ENSVVUG00000004176) #30	FADS1 (ENSVVUG00000004096) #31	ENSVVUG00000004085	FADS2 (ENSVVUG00000004078) #32	FADS3 (ENSVVUG00000003847) #34	RAB3IL1 (ENSVVUG00000003803) #35	BEST1 (ENSVVUG00000003792) #36	FTH1 (ENSVVUG00000003781) ##37	INCENP (ENSVVUG00000003752)
Felidae	ANCESTRAL SPECIES		ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Panthera	ANCESTRAL SPECIES	18	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650.a.a #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Tiger	MODERN SPECIES	369	TMEM109 (ENSPTIG00000006013) #8	TMEM132A (ENSPTIG00000021093) #9	SLC15A3 (ENSPTIG00000019487) #10	ENSPTIG00000017692 #11	CD5 (ENSPTIG00000016289) #12	VPS37C (ENSPTIG00000015894) #13	ENSPTIG00000015062	ENSPTIG00000012026 #14	VWCE (ENSPTIG00000010196) #15	DDB1 (ENSPTIG00000006909) #16	TKFC (ENSPTIG00000005436) #17	CYB561A3 (ENSPTIG00000022099) #18	TMEM138 (ENSPTIG00000022079) #19	TMEM216 (ENSPTIG00000022051) #20	CPSF7 (ENSPTIG00000021699) #21	SDHAF2 (ENSPTIG00000021326) #22	PPP1R32 (ENSPTIG00000016565) #23	SYT7 (ENSPTIG00000008244) #25	DAGLA (ENSPTIG00000006114) #27	ENSPTIG00000000743 #28	TMEM258 (ENSPTIG00000020759) #29	FEN1 (ENSPTIG00000001610) #30	ENSPTIG00000019542	FADS1 (ENSPTIG00000017932) #31	FADS2 (ENSPTIG00000015140) #32	FADS3 (ENSPTIG00000014191) #34	RAB3IL1 (ENSPTIG00000012918) #35	ENSPTIG00000012608 #36	ENSPTIG00000011535 ##37	ENSPTIG00000006814	ASRGL1 (ENSPTIG00000005323)
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650.b #36	ENSGT00940000158650.a.a #36	ENSGT00950000182841.b.a.a.b.b ##37
leopard	MODERN SPECIES	64	TMEM109 (ENSPPRG00000002402) #8	TMEM132A (ENSPPRG00000002093) #9	SLC15A3 (ENSPPRG00000000982) #10	CD6 (ENSPPRG00000000694) #11	CD5 (ENSPPRG00000023376) #12	VPS37C (ENSPPRG00000024327) #13	ENSPPRG00000024452	ENSPPRG00000020150 #14	VWCE (ENSPPRG00000014468) #15	DDB1 (ENSPPRG00000013300) #16	TKFC (ENSPPRG00000012836) #17	CYB561A3 (ENSPPRG00000012268) #18	TMEM138 (ENSPPRG00000010265) #19	TMEM216 (ENSPPRG00000009045) #20	CPSF7 (ENSPPRG00000008538) #21	SDHAF2 (ENSPPRG00000006932) #22	PPP1R32 (ENSPPRG00000005500) #23	LRRC10B (ENSPPRG00000017051) #24	SYT7 (ENSPPRG00000001764) #25	DAGLA (ENSPPRG00000023515) #27	MYRF (ENSPPRG00000024144) #28	ENSPPRG00000013362 #29	FEN1 (ENSPPRG00000016819) #30	ENSPPRG00000012890	FADS1 (ENSPPRG00000012671) #31	FADS2 (ENSPPRG00000011694) #32	FADS3 (ENSPPRG00000009918) #34	RAB3IL1 (ENSPPRG00000008696) #35	ENSPPRG00000007627 #36	ENSPPRG00000007445 #36	ENSPPRG00000006764 ##37
lion	MODERN SPECIES	10	TMEM109 (ENSPLOG00000006101) #8	TMEM132A (ENSPLOG00000006122) #9	SLC15A3 (ENSPLOG00000006141) #10	CD6 (ENSPLOG00000006171) #11	CD5 (ENSPLOG00000006224) #12	VPS37C (ENSPLOG00000006252) #13	ENSPLOG00000006271	ENSPLOG00000006304 #14	VWCE (ENSPLOG00000006344) #15	DDB1 (ENSPLOG00000006422) #16	TKFC (ENSPLOG00000006453) #17	CYB561A3 (ENSPLOG00000006506) #18	TMEM138 (ENSPLOG00000006522) #19	TMEM216 (ENSPLOG00000006540) #20	CPSF7 (ENSPLOG00000006589) #21	SDHAF2 (ENSPLOG00000006635) #22	PPP1R32 (ENSPLOG00000006694) #23	LRRC10B (ENSPLOG00000006771) #24	SYT7 (ENSPLOG00000006911) #25	DAGLA (ENSPLOG00000007192) #27	MYRF (ENSPLOG00000007251) #28	ENSPLOG00000007399 #29	FEN1 (ENSPLOG00000007415) #30	ENSPLOG00000007425	FADS1 (ENSPLOG00000007444) #31	FADS2 (ENSPLOG00000007565) #32	FADS3 (ENSPLOG00000007672) #34	RAB3IL1 (ENSPLOG00000007741) #35	BEST1 (ENSPLOG00000007969) #36	ENSPLOG00000008095 ##37	INCENP (ENSPLOG00000008155)
Cat	MODERN SPECIES	241	TMEM109 (ENSFCAG00000022466) #8	TMEM132A (ENSFCAG00000019351) #9	SLC15A3 (ENSFCAG00000013670) #10	CD6 (ENSFCAG00000013671) #11	CD5 (ENSFCAG00000013672) #12	VPS37C (ENSFCAG00000041916) #13	ENSFCAG00000030014	ENSFCAG00000013673 #14	VWCE (ENSFCAG00000029857) #15	DDB1 (ENSFCAG00000029716) #16	TKFC (ENSFCAG00000026519) #17	CYB561A3 (ENSFCAG00000013674) #18	TMEM138 (ENSFCAG00000027625) #19	TMEM216 (ENSFCAG00000012248) #20	CPSF7 (ENSFCAG00000013677) #21	SDHAF2 (ENSFCAG00000013678) #22	PPP1R32 (ENSFCAG00000013679) #23	LRRC10B (ENSFCAG00000045510) #24	SYT7 (ENSFCAG00000013680) #25	DAGLA (ENSFCAG00000013681) #27	MYRF (ENSFCAG00000013683) #28	TMEM258 (ENSFCAG00000013684) #29	FEN1 (ENSFCAG00000013685) #30	ENSFCAG00000035555	FADS1 (ENSFCAG00000013686) #31	FADS2 (ENSFCAG00000024030) #32	FADS3 (ENSFCAG00000027535) #34	RAB3IL1 (ENSFCAG00000007376) #35	BEST1 (ENSFCAG00000050693) #36	FTH1 (ENSFCAG00000007382) ##37	INCENP (ENSFCAG00000002264)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Equus	ANCESTRAL SPECIES	11	ENSGT00940000153747	ENSGT00940000155036.r.a.b #14	ENSGT00940000155036.r.a.a.b #14	ENSGT00940000155036.r.a.a.a.a.b #14	ENSGT00940000155036.r.a.a.a.a.a #14	ENSGT00940000155036.r.b.b #14	ENSGT00940000155036.r.b.a.b #14	ENSGT00940000155036.r.b.a.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.a.c.a.b.b ##37	ENSGT00950000182841.b.a.a.a.c.a.b.a.b ##37
Donkey	MODERN SPECIES	8	ENSEASG00005008116 #14	ENSEASG00005024770 #14	ENSEASG00005028744 #14	ENSEASG00005024988 #14	ENSEASG00005032330 #14	ENSEASG00005029339 #14	ENSEASG00005008140 #14	ENSEASG00005031016 #14	VWCE (ENSEASG00005008162) #15	DDB1 (ENSEASG00005008184) #16	TKFC (ENSEASG00005008188) #17	CYB561A3 (ENSEASG00005008190) #18	TMEM138 (ENSEASG00005008192) #19	TMEM216 (ENSEASG00005032944) #20	CPSF7 (ENSEASG00005008196) #21	ENSEASG00005030853 #22	PPP1R32 (ENSEASG00005008201) #23	LRRC10B (ENSEASG00005028609) #24	SYT7 (ENSEASG00005008206) #25	DAGLA (ENSEASG00005008208) #27	MYRF (ENSEASG00005008220) #28	ENSEASG00005008224 #29	FEN1 (ENSEASG00005030604) #30	ENSEASG00005008225	FADS1 (ENSEASG00005008226) #31	FADS2 (ENSEASG00005008287) #32	FADS3 (ENSEASG00005009066) #34	RAB3IL1 (ENSEASG00005009075) #35	BEST1 (ENSEASG00005009078) #36	ENSEASG00005036587 ##37	INCENP (ENSEASG00005009084)
Horse	MODERN SPECIES	3	ENSECAG00000039375 #14	ENSECAG00000035310 #14	ENSECAG00000038287 #14	ENSECAG00000040239 #14	ENSECAG00000048988 #14	ENSECAG00000031192 #14	ENSECAG00000050402 #14	ENSECAG00000052923	ENSECAG00000035902 #14	VWCE (ENSECAG00000010750) #15	DDB1 (ENSECAG00000012136) #16	TKFC (ENSECAG00000015944) #17	TMEM138 (ENSECAG00000018278) #19	TMEM216 (ENSECAG00000018294) #20	CPSF7 (ENSECAG00000018521) #21	SDHAF2 (ENSECAG00000019760) #22	PPP1R32 (ENSECAG00000019863) #23	LRRC10B (ENSECAG00000026998) #24	SYT7 (ENSECAG00000020657) #25	DAGLA (ENSECAG00000020795) #27	MYRF (ENSECAG00000021799) #28	FEN1 (ENSECAG00000005344) #30	ENSECAG00000056039	FADS1 (ENSECAG00000023280) #31	FADS2 (ENSECAG00000024650) #32	FADS3 (ENSECAG00000024915) #34	RAB3IL1 (ENSECAG00000006755) #35	BEST1 (ENSECAG00000007692) #36	FTH1 (ENSECAG00000008683) ##37	INCENP (ENSECAG00000009621)	ENSECAG00000010276
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.l
Megabat	MODERN SPECIES	8168															CPSF7 (ENSPVAG00000010675) #21	SDHAF2 (ENSPVAG00000010674) #22	PPP1R32 (ENSPVAG00000010672) #23
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.f #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.l	ENSGT00390000013802
Greater horseshoe bat	MODERN SPECIES	2	TMEM109 (ENSRFEG00010002097) #8	TMEM132A (ENSRFEG00010002061) #9	SLC15A3 (ENSRFEG00010002033) #10	CD6 (ENSRFEG00010001990) #11	CD5 (ENSRFEG00010001945) #12	VPS37C (ENSRFEG00010001914) #13	ENSRFEG00010001900	PGA (ENSRFEG00010001876) #14	VWCE (ENSRFEG00010001793) #15	DDB1 (ENSRFEG00010001692) #16	TKFC (ENSRFEG00010001572) #17	CYB561A3 (ENSRFEG00010001532) #18	TMEM138 (ENSRFEG00010001493) #19	TMEM216 (ENSRFEG00010001454) #20	CPSF7 (ENSRFEG00010001384) #21	SDHAF2 (ENSRFEG00010001337) #22	PPP1R32 (ENSRFEG00010001269) #23	LRRC10B (ENSRFEG00010001228) #24	SYT7 (ENSRFEG00010001087) #25	DAGLA (ENSRFEG00010000953) #27	MYRF (ENSRFEG00010000719) #28	ENSRFEG00010000644 #29	FEN1 (ENSRFEG00010000639) #30	ENSRFEG00010000627	FADS2 (ENSRFEG00010000561) #32	FADS1 (ENSRFEG00010015439) #31	RAB3IL1 (ENSRFEG00010015301) #35	ENSRFEG00010015154 ##37	INCENP (ENSRFEG00010015121)	ENSRFEG00010015100	ENSRFEG00010014944
Microbat	MODERN SPECIES	1954										DDB1 (ENSMLUG00000013232) #16	TKFC (ENSMLUG00000013251) #17	CYB561A3 (ENSMLUG00000013265) #18	TMEM138 (ENSMLUG00000013268) #19	TMEM216 (ENSMLUG00000013273) #20	CPSF7 (ENSMLUG00000013278) #21	SDHAF2 (ENSMLUG00000001804) #22
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00390000013802
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000153747	ENSGT00940000155036 #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00530000063866
Elephant	MODERN SPECIES	532	TMEM109 (ENSLAFG00000010958) #8	TMEM132A (ENSLAFG00000003597) #9	SLC15A3 (ENSLAFG00000005845) #10	CD6 (ENSLAFG00000008816) #11	CD5 (ENSLAFG00000016852) #12	VPS37C (ENSLAFG00000016860) #13	ENSLAFG00000030447	ENSLAFG00000012777 #14	VWCE (ENSLAFG00000031920) #15	DDB1 (ENSLAFG00000011513) #16	TKFC (ENSLAFG00000017295) #17	CYB561A3 (ENSLAFG00000017311) #18	TMEM138 (ENSLAFG00000011527) #19	TMEM216 (ENSLAFG00000011534) #20	CPSF7 (ENSLAFG00000032084) #21	SDHAF2 (ENSLAFG00000004131) #22	PPP1R32 (ENSLAFG00000015434) #23	SYT7 (ENSLAFG00000011536) #25	DAGLA (ENSLAFG00000004152) #27	MYRF (ENSLAFG00000004162) #28	TMEM258 (ENSLAFG00000006503) #29	ENSLAFG00000032349	FADS1 (ENSLAFG00000031402) #31	FADS2 (ENSLAFG00000004813) #32	FADS3 (ENSLAFG00000020716) #34	RAB3IL1 (ENSLAFG00000004815) #35	BEST1 (ENSLAFG00000004818) #36	ENSLAFG00000004824 ##37	ENSLAFG00000006290	ENSLAFG00000027028	ENSLAFG00000023098
Hyrax	MODERN SPECIES	8925														ENSPCAG00000009771 #20	CPSF7 (ENSPCAG00000009725) #21	SDHAF2 (ENSPCAG00000009706) #22
Tenrec	MODERN SPECIES	4404															CPSF7 (ENSETEG00000003765) #21	SDHAF2 (ENSETEG00000003766) #22	PPP1R32 (ENSETEG00000003768) #23
Xenarthra	ANCESTRAL SPECIES	495										ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25
Sloth	MODERN SPECIES	6932														TMEM216 (ENSCHOG00000005199) #20	CPSF7 (ENSCHOG00000005200) #21	SDHAF2 (ENSCHOG00000005213) #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2630										DDB1 (ENSDNOG00000014884) #16	TKFC (ENSDNOG00000014918) #17	CYB561A3 (ENSDNOG00000048434) #18	TMEM138 (ENSDNOG00000034054) #19	TMEM216 (ENSDNOG00000034511) #20	CPSF7 (ENSDNOG00000018517) #21	ENSDNOG00000046687 #22	PPP1R32 (ENSDNOG00000045881) #23	LRRC10B (ENSDNOG00000019407) #24	SYT7 (ENSDNOG00000038269) #25
Armadillo	MODERN SPECIES	457									ENSDNOG00000031435	ENSDNOG00000031761	ENSDNOG00000010504	MAMLD1 (ENSDNOG00000034921)	MTM1 (ENSDNOG00000032808)	MTMR1 (ENSDNOG00000013433)	CD99L2 (ENSDNOG00000038948)	ENSDNOG00000008210 #22	ENSDNOG00000049232	GPR50 (ENSDNOG00000016520)	VMA21 (ENSDNOG00000008426)	ENSDNOG00000043690	PRRG3 (ENSDNOG00000038582)	FATE1 (ENSDNOG00000007352)
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a ##37
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00940000153662.A #7	ENSGT00940000154420.C.i.q.a	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Diprotodontia	ANCESTRAL SPECIES	26	ENSGT00940000153662.A #7	ENSGT00940000154420.C.i.q.a	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00940000153662.A #7	ENSGT00940000154420.C.i.q.a	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00390000017536 #12	ENSGT00950000183012.A.b #13	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Common wonbat	MODERN SPECIES	901	ENSVURG00010003522	PRPF19 (ENSVURG00010003510) #7	TMEM109 (ENSVURG00010003500) #8	TMEM132A (ENSVURG00010003472) #9	SLC15A3 (ENSVURG00010003467) #10	ENSVURG00010003415 #11	ENSVURG00010003385 #12	VPS37C (ENSVURG00010003376) #13	VWCE (ENSVURG00010003339) #15	DDB1 (ENSVURG00010003281) #16	TKFC (ENSVURG00010003242) #17	CYB561A3 (ENSVURG00010003227) #18	TMEM138 (ENSVURG00010003209) #19	TMEM216 (ENSVURG00010003196) #20	CPSF7 (ENSVURG00010003178) #21	SDHAF2 (ENSVURG00010003160) #22	PPP1R32 (ENSVURG00010003144) #23	LRRC10B (ENSVURG00010003134) #24	SYT7 (ENSVURG00010003104) #25	DAGLA (ENSVURG00010003069) #27	MYRF (ENSVURG00010003029) #28	TMEM258 (ENSVURG00010003004) #29	FEN1 (ENSVURG00010002995) #30	FADS1 (ENSVURG00010002983) #31	FADS2 (ENSVURG00010002917) #32	FADS3 (ENSVURG00010002868) #34	RAB3IL1 (ENSVURG00010002828) #35	ENSVURG00010002810 #36	ENSVURG00010002790 ##37	INCENP (ENSVURG00010002477)	ASRGL1 (ENSVURG00010002440)
koala	MODERN SPECIES	179									VWCE (ENSPCIG00000002691) #15	DDB1 (ENSPCIG00000002643) #16	TKFC (ENSPCIG00000002619) #17	CYB561A3 (ENSPCIG00000002594) #18	TMEM138 (ENSPCIG00000002572) #19	ENSPCIG00000002563 #20	CPSF7 (ENSPCIG00000002551) #21	SDHAF2 (ENSPCIG00000002531) #22	PPP1R32 (ENSPCIG00000013351) #23	LRRC10B (ENSPCIG00000013347) #24	SYT7 (ENSPCIG00000013322) #25	DAGLA (ENSPCIG00000020645) #27	MYRF (ENSPCIG00000010426) #28	TMEM258 (ENSPCIG00000010423) #29	FEN1 (ENSPCIG00000010422) #30	FADS1 (ENSPCIG00000009947) #31	FADS2 (ENSPCIG00000017850) #32	FADS3 (ENSPCIG00000017847) #34	RAB3IL1 (ENSPCIG00000036371) #35	ENSPCIG00000033063 #36	ENSPCIG00000035145 ##37	INCENP (ENSPCIG00000017818)	ASRGL1 (ENSPCIG00000017813)
Wallaby	MODERN SPECIES	7583																SDHAF2 (ENSMEUG00000016342) #22
Tasmanian devil	MODERN SPECIES	5	PRPF19 (ENSSHAG00000009462) #7	ENSSHAG00000027205	ENSSHAG00000031486 #8	TMEM132A (ENSSHAG00000009689) #9	SLC15A3 (ENSSHAG00000028185) #10	ENSSHAG00000009942 #11	ENSSHAG00000010764 #12	VPS37C (ENSSHAG00000024862) #13	VWCE (ENSSHAG00000011338) #15	DDB1 (ENSSHAG00000011600) #16	TKFC (ENSSHAG00000011757) #17	CYB561A3 (ENSSHAG00000011817) #18	ENSSHAG00000030994 #19	TMEM216 (ENSSHAG00000023919) #20	CPSF7 (ENSSHAG00000029816) #21	ENSSHAG00000012058 #22	PPP1R32 (ENSSHAG00000012268) #23	SYT7 (ENSSHAG00000012521) #25	DAGLA (ENSSHAG00000024828) #27	ENSSHAG00000002443 #28	ENSSHAG00000003063 #29	FEN1 (ENSSHAG00000003713) #30	FADS1 (ENSSHAG00000031846) #31	FADS2 (ENSSHAG00000020917) #32	FADS3 (ENSSHAG00000007319) #34	ENSSHAG00000027266 #35	ENSSHAG00000023427 #36	FTH1 (ENSSHAG00000026937) ##37	INCENP (ENSSHAG00000003794)	ASRGL1 (ENSSHAG00000031675)	AHNAK (ENSSHAG00000027365)
Opossum	DUPLICATION
Opossum	MODERN SPECIES	4	ENSMODG00000020334	ENSMODG00000020336	ENSMODG00000020337	PRPF19 (ENSMODG00000020338) #7	TMEM109 (ENSMODG00000020339) #8	ENSMODG00000020341 #11	ENSMODG00000029458 #12	VPS37C (ENSMODG00000020343) #13	VWCE (ENSMODG00000020350) #15	DDB1 (ENSMODG00000020353) #16	TKFC (ENSMODG00000020356) #17	CYB561A3 (ENSMODG00000020358) #18	TMEM138 (ENSMODG00000020360) #19	ENSMODG00000020362 #20	CPSF7 (ENSMODG00000020364) #21	ENSMODG00000020366 #22	ENSMODG00000020368 #23	ENSMODG00000049526	LRRC10B (ENSMODG00000020369) #24	ENSMODG00000007494 #32	FADS3 (ENSMODG00000007513) #34	ENSMODG00000007582 ##37	INCENP (ENSMODG00000007601)	ENSMODG00000045936	ASRGL1 (ENSMODG00000007616)	ENSMODG00000007627	ENSMODG00000043184	ENSMODG00000007691	TUT1 (ENSMODG00000007710)	EML3 (ENSMODG00000007770)	ENSMODG00000007785
Opossum	MODERN SPECIES	2	ZBTB10 (ENSMODG00000006584)	ZNF704 (ENSMODG00000006569)	PAG1 (ENSMODG00000006558)	ENSMODG00000043391	FABP5 (ENSMODG00000006544)	PMP2 (ENSMODG00000040370)	FABP9 (ENSMODG00000006483)	ENSMODG00000025609	ENSMODG00000028815	IMPA1 (ENSMODG00000006339)	SLC10A5 (ENSMODG00000025002)	ZFAND1 (ENSMODG00000006232)	CHMP4C (ENSMODG00000006220)	ENSMODG00000006200	ENSMODG00000025003	ENSMODG00000006055 #22	ENSMODG00000029239	ENSMODG00000006045	ENSMODG00000006029	ENSMODG00000006024	E2F5 (ENSMODG00000005958)	RBIS (ENSMODG00000025007)	CA13 (ENSMODG00000005921)	CA1 (ENSMODG00000005833)	CA3 (ENSMODG00000005825)	ENSMODG00000025608	ENSMODG00000040828	ENSMODG00000037337	ENSMODG00000038275	ENSMODG00000049668	ENSMODG00000038943
Platypus	MODERN SPECIES	14	PTGDR2 (ENSOANG00000003979)	ENSOANG00000042117	PRPF19 (ENSOANG00000009681) #7	TMEM109 (ENSOANG00000009683) #8	TMEM132A (ENSOANG00000049970) #9	SLC15A3 (ENSOANG00000037038) #10	ENSOANG00000003839 #11	ENSOANG00000008009 #12	VPS37C (ENSOANG00000014602) #13	VWCE (ENSOANG00000021542) #15	DDB1 (ENSOANG00000004897) #16	TKFC (ENSOANG00000010938) #17	CYB561A3 (ENSOANG00000050431) #18	TMEM138 (ENSOANG00000046660) #20	CPSF7 (ENSOANG00000010882) #21	SDHAF2 (ENSOANG00000042499) #22	PPP1R32 (ENSOANG00000010806) #23	LRRC10B (ENSOANG00000001737) #24	SYT7 (ENSOANG00000039173) #25	DAGLA (ENSOANG00000022487) #27	MYRF (ENSOANG00000003410) #28	TMEM258 (ENSOANG00000022139) #29	FEN1 (ENSOANG00000041443) #30	FADS1 (ENSOANG00000046623) #31	FADS2 (ENSOANG00000037735) #32	FADS3 (ENSOANG00000004111) #34	RAB3IL1 (ENSOANG00000005198) #35	ENSOANG00000037099 #36	ENSOANG00000012401 ##37	ENSOANG00000032225	ASRGL1 (ENSOANG00000014197)
Sauria	ANCESTRAL SPECIES	3	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37
Cryptodira	ANCESTRAL SPECIES	47	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036.y.b.b #14	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT01030000235106	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00940000160120	ENSGT00940000157217	ENSGT00500000045231	ENSGT00390000010318	ENSGT00390000000973.a.b	ENSGT00510000046908.a.b	ENSGT00390000002216	ENSGT00940000158581.d	ENSGT00830000128422	ENSGT00390000017459	ENSGT00940000160151	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159741.h	ENSGT00940000159778	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00390000015386	ENSGT00390000004855	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.D.c	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Testudinidae	DUPLICATION
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036.y.b.b #14	ENSGT00940000155036.y.b.a.a.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00940000161709	ENSGT00950000183157.b	ENSGT00940000156878.h	ENSGT01030000235106	ENSGT00390000001149.c #22	ENSGT00390000003127 #23	ENSGT00940000170324	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005010039 #14	ENSGEVG00005007838 #14	ENSGEVG00005007348 #14	ENSGEVG00005007082 #14	ENSGEVG00005006798 #14	ENSGEVG00005006587 #14	ENSGEVG00005006523	VWCE (ENSGEVG00005006499) #15	DDB1 (ENSGEVG00005006454) #16	TKFC (ENSGEVG00005006420) #17	CYB561A3 (ENSGEVG00005006395) #18	TMEM138 (ENSGEVG00005006358) #19	TMEM216 (ENSGEVG00005006332) #20	ENSGEVG00005006302	ENSGEVG00005006287	ENSGEVG00005006101 #22	PPP1R32 (ENSGEVG00005006026) #23	ENSGEVG00005006003	LRRC10B (ENSGEVG00005005977) #24	SYT7 (ENSGEVG00005005950) #25	DAGLA (ENSGEVG00005005875) #27	MYRF (ENSGEVG00005005739) #28	TMEM258 (ENSGEVG00005005705) #29	FEN1 (ENSGEVG00005017091) #30	ENSGEVG00005016961 ##34	ENSGEVG00005016926 ##34	ENSGEVG00005016902 ##34	ENSGEVG00005016857 ##34	ENSGEVG00005016773 #34	RAB3IL1 (ENSGEVG00005016738) #35	BEST1 (ENSGEVG00005016682) #36
Abingdon island giant tortoise	MODERN SPECIES	471							ENSCABG00000009229	ENSCABG00000009227	DDB1 (ENSCABG00000009221) #16	TKFC (ENSCABG00000009218) #17	CYB561A3 (ENSCABG00000009215) #18	TMEM138 (ENSCABG00000009213) #19	TMEM216 (ENSCABG00000009212) #20	ENSCABG00000009210	ENSCABG00000009208	ENSCABG00000009067 #22	ENSCABG00000009064	LRRC10B (ENSCABG00000009061) #24	SYT7 (ENSCABG00000009058) #25
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00940000160120	ENSGT00940000157217	ENSGT00500000045231	ENSGT00390000010318	ENSGT00390000000973.a.b	ENSGT00510000046908.a.b	ENSGT00390000002216	ENSGT00940000158581.d	ENSGT00830000128422	ENSGT00390000017459	ENSGT00940000160151	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159741.h	ENSGT00940000159778	ENSGT00390000001149.d #22	ENSGT00390000015386	ENSGT00390000004855	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.D.c	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a
Goode s thornscrub tortoise	MODERN SPECIES	19	MXD4 (ENSGEVG00005001978)	ZFYVE28 (ENSGEVG00005002043)	CFAP99 (ENSGEVG00005002179)	RNF4 (ENSGEVG00005002218)	FAM193A (ENSGEVG00005002232)	TNIP2 (ENSGEVG00005002252)	SH3BP2 (ENSGEVG00005002263)	ADD1 (ENSGEVG00005002310)	ENSGEVG00005002372	NOP14 (ENSGEVG00005002393)	GRK4 (ENSGEVG00005002427)	HTT (ENSGEVG00005002723)	MSANTD1 (ENSGEVG00005003475)	RGS12 (ENSGEVG00005003494)	HGFAC (ENSGEVG00005003528)	ENSGEVG00005003553 #22	DOK7 (ENSGEVG00005003575)	LRPAP1 (ENSGEVG00005003603)	ADRA2C (ENSGEVG00005009045)	ENSGEVG00005009071	ENSGEVG00005009099	CPZ (ENSGEVG00005009142)	GPR78 (ENSGEVG00005009219)	ACOX3 (ENSGEVG00005009570)	HTRA3 (ENSGEVG00005009626)	ENSGEVG00005009702	ABLIM2 (ENSGEVG00005010117)	AFAP1 (ENSGEVG00005010457)	SORCS2 (ENSGEVG00005010610)	GRPEL1 (ENSGEVG00005011217)	TADA2B (ENSGEVG00005011238)
Abingdon island giant tortoise	MODERN SPECIES	1355											ENSCABG00000007560	MSANTD1 (ENSCABG00000007564)	ENSCABG00000007570	ENSCABG00000007576	HGFAC (ENSCABG00000007582)	ENSCABG00000007585 #22	DOK7 (ENSCABG00000007587)	LRPAP1 (ENSCABG00000007591)	ADRA2C (ENSCABG00000007599)	HMX1 (ENSCABG00000007601)	ENSCABG00000007604	RAI14 (ENSCABG00000007607)	TTC23L (ENSCABG00000007609)	ENSCABG00000007615	BRIX1 (ENSCABG00000007620)
Emydidae	DUPLICATION
Emydidae	ANCESTRAL SPECIES	1	ENSGT00940000160120	ENSGT00940000157217	ENSGT00500000045231	ENSGT00390000010318	ENSGT00390000000973.a.b	ENSGT00510000046908.a.b	ENSGT00390000002216	ENSGT00940000158581.d	ENSGT00830000128422	ENSGT00390000017459	ENSGT00940000160151	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159741.h	ENSGT00940000159778	ENSGT00390000001149.e #22	ENSGT00390000015386	ENSGT00390000004855	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.D.c	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a
Three-toed box turtle	MODERN SPECIES	26	MXD4 (ENSTMTG00000002289)	ZFYVE28 (ENSTMTG00000002279)	CFAP99 (ENSTMTG00000002255)	FAM193A (ENSTMTG00000002228)	TNIP2 (ENSTMTG00000002209)	SH3BP2 (ENSTMTG00000002197)	ADD1 (ENSTMTG00000002162)	ENSTMTG00000002147	NOP14 (ENSTMTG00000002129)	GRK4 (ENSTMTG00000002116)	HTT (ENSTMTG00000001181)	MSANTD1 (ENSTMTG00000000976)	ENSTMTG00000000958	ENSTMTG00000000940	HGFAC (ENSTMTG00000000923)	ENSTMTG00000000913 #22	DOK7 (ENSTMTG00000000894)	LRPAP1 (ENSTMTG00000000865)	ADRA2C (ENSTMTG00000000854)	HMX1 (ENSTMTG00000000845)	ENSTMTG00000000832	CPZ (ENSTMTG00000000812)	GPR78 (ENSTMTG00000000785)	TRMT44 (ENSTMTG00000000727)	ACOX3 (ENSTMTG00000000680)	HTRA3 (ENSTMTG00000000640)	ENSTMTG00000000583	ABLIM2 (ENSTMTG00000000378)	AFAP1 (ENSTMTG00000000264)	SORCS2 (ENSTMTG00000000224)	GRPEL1 (ENSTMTG00000000187)
painted turtle	MODERN SPECIES	984													ENSCPBG00000002521	ENSCPBG00000002558	ENSCPBG00000002588	ENSCPBG00000002654 #22	ENSCPBG00000002722	MREG (ENSCPBG00000002761)	ENSCPBG00000002804	ENSCPBG00000002856	ENSCPBG00000002877
Emydidae	ANCESTRAL SPECIES	54	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036.y.b.b #14	ENSGT00940000155036.y.a #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT01030000235106	ENSGT00390000001149.f #22	ENSGT00940000170324	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37
Three-toed box turtle	MODERN SPECIES	34	SLC15A3 (ENSTMTG00000015415) #10	CD6 (ENSTMTG00000015378) #11	ENSTMTG00000015326	VPS37C (ENSTMTG00000015311) #13	ENSTMTG00000015299	ENSTMTG00000015250	ENSTMTG00000015155	VWCE (ENSTMTG00000015112) #15	DDB1 (ENSTMTG00000015056) #16	TKFC (ENSTMTG00000015040) #17	CYB561A3 (ENSTMTG00000015023) #18	TMEM138 (ENSTMTG00000015004) #19	TMEM216 (ENSTMTG00000014990) #20	ENSTMTG00000014968	ENSTMTG00000014958	ENSTMTG00000014947 #22	ENSTMTG00000014935	LRRC10B (ENSTMTG00000014926) #24	SYT7 (ENSTMTG00000014896) #25	DAGLA (ENSTMTG00000014867) #27	MYRF (ENSTMTG00000014135) #28	TMEM258 (ENSTMTG00000014059) #29	FEN1 (ENSTMTG00000014054) #30	ENSTMTG00000014042 ##34	ENSTMTG00000014027 ##34	ENSTMTG00000014777 ##34	ENSTMTG00000014758 ##34	ENSTMTG00000014740 #34	RAB3IL1 (ENSTMTG00000014710) #35	BEST1 (ENSTMTG00000014682) #36	ENSTMTG00000014675 ##37
Archosauria	ANCESTRAL SPECIES	41	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C
Aves	ANCESTRAL SPECIES	42	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036.w #14	ENSGT00940000167768	ENSGT00940000155036.x #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C
Neognathae	ANCESTRAL SPECIES	30	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000155036.x #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00960000192722	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00960000192722	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00940000154816.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011
Passeriformes	ANCESTRAL SPECIES	25	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949
Great tit	MODERN SPECIES	25	BAAT (ENSPMJG00000006930)	ZP1 (ENSPMJG00000006893)	PRPF19 (ENSPMJG00000006887) #7	ENSPMJG00000006885	TMEM132A (ENSPMJG00000006881) #9	CD6 (ENSPMJG00000006875) #11	ENSPMJG00000006871	VPS37C (ENSPMJG00000006869) #13	ENSPMJG00000006862	VWCE (ENSPMJG00000006828) #15	DDB1 (ENSPMJG00000006825) #16	TKFC (ENSPMJG00000006823) #17	CYB561A3 (ENSPMJG00000006819) #18	ENSPMJG00000006811 #20	CPSF7 (ENSPMJG00000006809) #21	SDHAF2 (ENSPMJG00000006800) #22	LRRC10B (ENSPMJG00000006795) #24	ENSPMJG00000006791	SYT7 (ENSPMJG00000006781) #25	DAGLA (ENSPMJG00000006765) #27	MYRF (ENSPMJG00000006743) #28	ENSPMJG00000006738 #29	FEN1 (ENSPMJG00000006734) #30	ENSPMJG00000006733	ENSPMJG00000006727	ENSPMJG00000006691	ENSPMJG00000006677	ENSPMJG00000006655	RMDN3 (ENSPMJG00000006650)	GCHFR (ENSPMJG00000006642)	C15orf62 (ENSPMJG00000006640)
Passeriformes_d	ANCESTRAL SPECIES	24	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT01060000248781	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949	ENSGT00390000005535
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949	ENSGT00390000005535
Common canary	MODERN SPECIES	45	PRPF19 (ENSSCAG00000009768) #7	ENSSCAG00000009773	TMEM132A (ENSSCAG00000009778) #9	ENSSCAG00000009790 #11	ENSSCAG00000009802	VPS37C (ENSSCAG00000009807) #13	ENSSCAG00000009813	ENSSCAG00000009819	DDB1 (ENSSCAG00000009823) #16	CYB561A3 (ENSSCAG00000009828) #18	TKFC (ENSSCAG00000009831) #17	TMEM138 (ENSSCAG00000009836) #19	TMEM216 (ENSSCAG00000009841) #20	ENSSCAG00000009844 #21	ENSSCAG00000009846 #21	SDHAF2 (ENSSCAG00000009848) #22	LRRC10B (ENSSCAG00000009852) #24	SYT7 (ENSSCAG00000009858) #25	DAGLA (ENSSCAG00000009872) #27	MYRF (ENSSCAG00000009943) #28	TMEM258 (ENSSCAG00000009954) #29	FEN1 (ENSSCAG00000009957) #30	ENSSCAG00000009959	ENSSCAG00000009962	RTN4RL2 (ENSSCAG00000009969)	TIMM10 (ENSSCAG00000009972)	YPEL4 (ENSSCAG00000009975)	CLP1 (ENSSCAG00000009980)	ZDHHC5 (ENSSCAG00000009995)	MED19 (ENSSCAG00000010014)	ENSSCAG00000010016
Zebra finch	MODERN SPECIES	27	ENSTGUG00000006283	PRPF19 (ENSTGUG00000006319) #7	TMEM109 (ENSTGUG00000006345) #8	TMEM132A (ENSTGUG00000006351) #9	ENSTGUG00000006362 #11	ENSTGUG00000006369	VPS37C (ENSTGUG00000018909) #13	ENSTGUG00000006387	ENSTGUG00000006410 #15	DDB1 (ENSTGUG00000006414) #16	TKFC (ENSTGUG00000006479) #17	CYBASC3 (ENSTGUG00000006507) #18	TMEM138 (ENSTGUG00000026595) #19	TMEM216 (ENSTGUG00000006511) #20	CPSF7 (ENSTGUG00000006513) #21	SDHAF2 (ENSTGUG00000027564) #22	LRRC10B (ENSTGUG00000006528) #24	SYT7 (ENSTGUG00000006531) #25	DAGLA (ENSTGUG00000006570) #27	MYRF (ENSTGUG00000006600) #28	TMEM258 (ENSTGUG00000021636) #29	FEN1 (ENSTGUG00000006627) #30	ENSTGUG00000006630	RMDN3 (ENSTGUG00000006637)	ENSTGUG00000006659	DNAJC17 (ENSTGUG00000026553)	C15orf62 (ENSTGUG00000006683)	ENSTGUG00000006685	ENSTGUG00000022591	MRPL21 (ENSTGUG00000006693)	IGHMBP2 (ENSTGUG00000006705)
Medium ground finch	MODERN SPECIES	119	ENSGFOG00000011332	BAAT (ENSGFOG00000011327)	ZP1 (ENSGFOG00000011316)	PRPF19 (ENSGFOG00000011310) #7	TMEM109 (ENSGFOG00000011308) #8	TMEM132A (ENSGFOG00000011304) #9	ENSGFOG00000011300 #11	ENSGFOG00000011296	VPS37C (ENSGFOG00000011295) #13	ENSGFOG00000011289	DDB1 (ENSGFOG00000011278) #16	TKFC (ENSGFOG00000011260) #17	CYB561A3 (ENSGFOG00000011254) #18	TMEM138 (ENSGFOG00000011251) #19	TMEM216 (ENSGFOG00000011250) #20	SDHAF2 (ENSGFOG00000011243) #22	SYT7 (ENSGFOG00000011233) #25	DAGLA (ENSGFOG00000011215) #27	MYRF (ENSGFOG00000011160) #28	TMEM258 (ENSGFOG00000011146) #29	FEN1 (ENSGFOG00000011141) #30	ENSGFOG00000011135	RMDN3 (ENSGFOG00000011124)	GCHFR (ENSGFOG00000011120)	C15orf62 (ENSGFOG00000011118)	DNAJC17 (ENSGFOG00000011114)	ENSGFOG00000011112	MRPL21 (ENSGFOG00000011109)	IGHMBP2 (ENSGFOG00000010964)	SYT12 (ENSGFOG00000010951)	PTDSS2 (ENSGFOG00000010879)
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT01010000222336.a.a.b	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00960000192722	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT01100000263572.b	ENSGT01100000263499.a.a.d	ENSGT01100000263499.a.a.c	ENSGT00940000154816.b	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00950000182881.a.b.a.b
Kakapo	MODERN SPECIES	21	ENSSHBG00005018795	BAAT (ENSSHBG00005018790)	ENSSHBG00005018775	PRPF19 (ENSSHBG00005018763) #7	TMEM132A (ENSSHBG00005018758) #9	ENSSHBG00005018753	VPS37C (ENSSHBG00005018748) #13	ENSSHBG00005018737	VWCE (ENSSHBG00005018729) #15	DDB1 (ENSSHBG00005018722) #16	TKFC (ENSSHBG00005018702) #17	CYB561A3 (ENSSHBG00005018693) #18	TMEM138 (ENSSHBG00005018689) #19	TMEM216 (ENSSHBG00005018688) #20	CPSF7 (ENSSHBG00005018685) #21	SDHAF2 (ENSSHBG00005018682) #22	ENSSHBG00005018680	LRRC10B (ENSSHBG00005018675) #24	SYT7 (ENSSHBG00005018669) #25	DAGLA (ENSSHBG00005018661) #27	ENSSHBG00005018653	MYRF (ENSSHBG00005018646) #28	ENSSHBG00005018644	FEN1 (ENSSHBG00005018642) #30	ENSSHBG00005018639	ENSSHBG00005018636	ENSSHBG00005018626	ENSSHBG00005018612	ENSSHBG00005018589	ENSSHBG00005018577	NDUFS8 (ENSSHBG00005018555)
Golden eagle	MODERN SPECIES	7	ZP1 (ENSACCG00020011636)	PRPF19 (ENSACCG00020011674) #7	TMEM132A (ENSACCG00020011751) #9	SLC15A3 (ENSACCG00020011816) #10	ENSACCG00020011851	ENSACCG00020011928	VPS37C (ENSACCG00020011971) #13	ENSACCG00020012108	ENSACCG00020012172	DDB1 (ENSACCG00020012215) #16	TKFC (ENSACCG00020012290) #17	CYB561A3 (ENSACCG00020012432) #18	TMEM138 (ENSACCG00020012452) #19	TMEM216 (ENSACCG00020012474) #20	ENSACCG00020012497 #21	SDHAF2 (ENSACCG00020012511) #22	LRRC10B (ENSACCG00020012541) #24	SYT7 (ENSACCG00020012563) #25	DAGLA (ENSACCG00020012603) #27	MYRF (ENSACCG00020012724) #28	TMEM258 (ENSACCG00020012864) #29	FEN1 (ENSACCG00020012876) #30	ENSACCG00020012892	ENSACCG00020012905	ENSACCG00020012919	ENSACCG00020012930	ENSACCG00020012963	ENSACCG00020012981	OR9G1 (ENSACCG00020013005)	ENSACCG00020013027	ENSACCG00020013041
Galloanserae	ANCESTRAL SPECIES	30	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768.a	ENSGT00940000162710.l	ENSGT00940000155036.x #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00960000192722	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.a
Phasianidae	ANCESTRAL SPECIES	26	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768.a	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.a.b	ENSGT00940000168541	ENSGT00940000155904.q.a.a
Phasianidae_b	ANCESTRAL SPECIES	34	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768.a	ENSGT00940000155036.x #14	ENSGT00940000167768.b	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00960000188779	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263498.a.b.b.a.a.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.a.b	ENSGT00940000155904.q.a.a	ENSGT00940000155904.q.b
Turkey	MODERN SPECIES	25	ENSMGAG00000019036	ENSMGAG00000020409	ENSMGAG00000004021	ENSMGAG00000003996	ENSMGAG00000016472	ENSMGAG00000018630	ENSMGAG00000004407	MYRF (ENSMGAG00000004733) #28	ENSMGAG00000004684 #29	ENSMGAG00000021352	FEN1 (ENSMGAG00000015781) #30	ENSMGAG00000004435	ENSMGAG00000004794 #27	ENSMGAG00000020740	ENSMGAG00000004876 #21	SDHAF2 (ENSMGAG00000004867) #22	LRRC10B (ENSMGAG00000004864) #24	SYT7 (ENSMGAG00000004836) #25	ENSMGAG00000018189	TMEM109 (ENSMGAG00000003167) #8	TMEM132A (ENSMGAG00000003140) #9	CD6 (ENSMGAG00000005214) #11	ENSMGAG00000005183	VPS37C (ENSMGAG00000021499) #13	ENSMGAG00000005103	ENSMGAG00000018660 #14	DDB1 (ENSMGAG00000004990) #16	TKFC (ENSMGAG00000004936) #17	CYB561A3 (ENSMGAG00000004917) #18	TMEM138 (ENSMGAG00000004906) #19	TMEM216 (ENSMGAG00000004904) #20
Japanese quail	MODERN SPECIES	23	PRPF19 (ENSCJPG00005013161) #7	TMEM109 (ENSCJPG00005013174) #8	TMEM132A (ENSCJPG00005013175) #9	CD6 (ENSCJPG00005013176) #11	ENSCJPG00005013177	VPS37C (ENSCJPG00005013178) #13	ENSCJPG00005013179	ENSCJPG00005013180	VWCE (ENSCJPG00005013181) #15	DDB1 (ENSCJPG00005013182) #16	TKFC (ENSCJPG00005013183) #17	CYB561A3 (ENSCJPG00005013184) #18	TMEM138 (ENSCJPG00005013185) #19	TMEM216 (ENSCJPG00005013186) #20	CPSF7 (ENSCJPG00005013187) #21	SDHAF2 (ENSCJPG00005013188) #22	LRRC10B (ENSCJPG00005013190) #24	SYT7 (ENSCJPG00005013191) #25	DAGLA (ENSCJPG00005013192) #27	MYRF (ENSCJPG00005013193) #28	ENSCJPG00005013194	FEN1 (ENSCJPG00005013196) #30	ENSCJPG00005013197	ENSCJPG00005013198	ENSCJPG00005013199	ENSCJPG00005013201	ENSCJPG00005013208	ENSCJPG00005013231	TCIRG1 (ENSCJPG00005013233)	ENSCJPG00005013234	ENSCJPG00005013238
Anatidae	ANCESTRAL SPECIES	49	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000162710.l	ENSGT00940000155036.x #14	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a.f #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00960000192722	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT01100000263503.C	ENSGT01100000263503.D	ENSGT01100000263572.a.b.a	ENSGT01100000263572.a.b.b	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00940000155566.c.a
Pink-footed goose	MODERN SPECIES	359	ZP1 (ENSABRG00000021973)	PRPF19 (ENSABRG00000021961) #7	TMEM109 (ENSABRG00000021953) #8	TMEM132A (ENSABRG00000021952) #9	ENSABRG00000021948	ENSABRG00000021941	VPS37C (ENSABRG00000021938) #13	ENSABRG00000021928	ENSABRG00000021910 #14	VWCE (ENSABRG00000021897) #15	DDB1 (ENSABRG00000021891) #16	TKFC (ENSABRG00000021886) #17	ENSABRG00000021885 #19	CPSF7 (ENSABRG00000021883) #21	ENSABRG00000021881 #18	SDHAF2 (ENSABRG00000021876) #22	ENSABRG00000021880	LRRC10B (ENSABRG00000021874) #24	SYT7 (ENSABRG00000021872) #25
African ostrich	MODERN SPECIES	83		SLC15A3 (ENSSCUG00000000177) #10	CD6 (ENSSCUG00000000178) #11	ENSSCUG00000000179	VPS37C (ENSSCUG00000000180) #13	ENSSCUG00000000181 #14	ENSSCUG00000000182	ENSSCUG00000000183 #14	VWCE (ENSSCUG00000000184) #15	DDB1 (ENSSCUG00000000185) #16	TKFC (ENSSCUG00000000186) #17	CYB561A3 (ENSSCUG00000000187) #18	TMEM138 (ENSSCUG00000000188) #19	TMEM216 (ENSSCUG00000000189) #20	CPSF7 (ENSSCUG00000000190) #21	SDHAF2 (ENSSCUG00000000191) #22	SYT7 (ENSSCUG00000000193) #25	ENSSCUG00000000194	DAGLA (ENSSCUG00000000195) #27	MYRF (ENSSCUG00000000196) #28	TMEM258 (ENSSCUG00000000197) #29	FEN1 (ENSSCUG00000000198) #30	ENSSCUG00000000199
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000155036 #14	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00940000161709	ENSGT00950000183157.b	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.b.a.b.b ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j
Episquamata	ANCESTRAL SPECIES		ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00940000161709	ENSGT00950000183157.b	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.f ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000161029 #11	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000164030	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.f ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C
Common wall lizard	MODERN SPECIES		TMEM109 (ENSPMRG00000000140) #8	TMEM132A (ENSPMRG00000000126) #9	SLC15A3 (ENSPMRG00000000107) #10	CD6 (ENSPMRG00000002062) #11	ENSPMRG00000002051	VPS37C (ENSPMRG00000002044) #13	ENSPMRG00000002032	VWCE (ENSPMRG00000001978) #15	DDB1 (ENSPMRG00000001944) #16	TKFC (ENSPMRG00000001900) #17	CYB561A3 (ENSPMRG00000001888) #18	TMEM138 (ENSPMRG00000001881) #19	TMEM216 (ENSPMRG00000001875) #20	ENSPMRG00000001860	CPSF7 (ENSPMRG00000001855) #21	SDHAF2 (ENSPMRG00000001852) #22	PPP1R32 (ENSPMRG00000001841) #23	ENSPMRG00000001834	SYT7 (ENSPMRG00000001826) #25	ENSPMRG00000001822	ENSPMRG00000001819	DAGLA (ENSPMRG00000001777) #27	MYRF (ENSPMRG00000001697) #28	TMEM258 (ENSPMRG00000001683) #29	FEN1 (ENSPMRG00000001679) #30	ENSPMRG00000001670 ##34	ENSPMRG00000001663 ##34	ENSPMRG00000001646 ##34	ENSPMRG00000001643	ENSPMRG00000001622 ##34	ENSPMRG00000001611 ##34
Argentine black and white tegu	MODERN SPECIES	40	ZP1 (ENSSMRG00000001659)	PRPF19 (ENSSMRG00000001775) #7	TMEM109 (ENSSMRG00000001784) #8	TMEM132A (ENSSMRG00000001787) #9	SLC15A3 (ENSSMRG00000001796) #10	VPS37C (ENSSMRG00000001799) #13	ENSSMRG00000001809	VWCE (ENSSMRG00000002297) #15	DDB1 (ENSSMRG00000002306) #16	TKFC (ENSSMRG00000002312) #17	CYB561A3 (ENSSMRG00000003179) #18	TMEM138 (ENSSMRG00000003180) #19	TMEM216 (ENSSMRG00000003183) #20	ENSSMRG00000003189	CPSF7 (ENSSMRG00000003193) #21	SDHAF2 (ENSSMRG00000003197) #22	PPP1R32 (ENSSMRG00000003201) #23	ENSSMRG00000003206	SYT7 (ENSSMRG00000003256) #25	DAGLA (ENSSMRG00000003313) #27	MYRF (ENSSMRG00000003330) #28	TMEM258 (ENSSMRG00000003353) #29	FEN1 (ENSSMRG00000003355) #30	ENSSMRG00000003356	ENSSMRG00000003369 ##34	ENSSMRG00000003387 ##34	ENSSMRG00000003398 ##34	ENSSMRG00000003409 ##34	ENSSMRG00000003476 ##34	ENSSMRG00000003529 ##34	ENSSMRG00000003537 #34
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00940000167155	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089 #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00950000183157.b	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089 #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.f ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089.d #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00950000183157.b	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000155040.a #24	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.a.b #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j
Elapidae_a	ANCESTRAL SPECIES	108	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089.d #15	ENSGT00940000161089.c #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00950000183157.b	ENSGT00730000110905.a #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000164030	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.a.b #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e.a.b ##34
Acanthophiinae	ANCESTRAL SPECIES	100	ENSGT00940000161188.d	ENSGT00940000153662.A #7	ENSGT00390000015704 #8	ENSGT00940000161414 #9	ENSGT00940000161889 #10	ENSGT00950000183012.A.b #13	ENSGT00940000167768	ENSGT00940000161089.d #15	ENSGT00950000183151.a.a.a #16	ENSGT00390000015415 #17	ENSGT00950000183197.b.a #18	ENSGT00390000018587 #19	ENSGT00940000153899.a.a #20	ENSGT00950000183157.b	ENSGT00730000110905.a.s #21	ENSGT00390000001149 #22	ENSGT00390000003127 #23	ENSGT00940000164030	ENSGT00940000157180 #25	ENSGT00940000161192 #27	ENSGT00530000063626.a #28	ENSGT00390000010089.a.b #29	ENSGT00940000155807.a #30	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e.a.b ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e.a.a ##34
Mainland tiger snake	MODERN SPECIES	178	ENSNSUG00000004042	ENSNSUG00000004041	TMEM109 (ENSNSUG00000004040) #8	TMEM132A (ENSNSUG00000003706) #9	SLC15A3 (ENSNSUG00000003696) #10	VPS37C (ENSNSUG00000003691) #13	ENSNSUG00000003487	VWCE (ENSNSUG00000003474) #15	DDB1 (ENSNSUG00000003464) #16	TKFC (ENSNSUG00000003453) #17	CYB561A3 (ENSNSUG00000003449) #18	TMEM138 (ENSNSUG00000003447) #19	TMEM216 (ENSNSUG00000003438) #20	ENSNSUG00000003432	ENSNSUG00000003423 #21	SDHAF2 (ENSNSUG00000003417) #22	PPP1R32 (ENSNSUG00000003407) #23	ENSNSUG00000003404	SYT7 (ENSNSUG00000003401) #25	DAGLA (ENSNSUG00000003363) #27	MYRF (ENSNSUG00000003362) #28	ENSNSUG00000003361 #29	FEN1 (ENSNSUG00000003360) #30	ENSNSUG00000003359 ##34	ENSNSUG00000003358 ##34	ENSNSUG00000003355 ##34	ENSNSUG00000003328 ##34
Eastern brown snake	MODERN SPECIES	132	TMEM109 (ENSPTXG00000011863) #8	ENSPTXG00000011865	TMEM132A (ENSPTXG00000011867) #9	SLC15A3 (ENSPTXG00000012555) #10	VPS37C (ENSPTXG00000012557) #13	ENSPTXG00000012558	VWCE (ENSPTXG00000012636) #15	DDB1 (ENSPTXG00000012662) #16	TKFC (ENSPTXG00000012663) #17	ENSPTXG00000012664 #18	ENSPTXG00000012665 #18	TMEM138 (ENSPTXG00000012668) #19	TMEM216 (ENSPTXG00000012669) #20	ENSPTXG00000012671	ENSPTXG00000012672 #21	SDHAF2 (ENSPTXG00000012673) #22	PPP1R32 (ENSPTXG00000012675) #23	ENSPTXG00000012676	SYT7 (ENSPTXG00000012678) #25	DAGLA (ENSPTXG00000012680) #27	MYRF (ENSPTXG00000012682) #28	TMEM258 (ENSPTXG00000012684) #29	FEN1 (ENSPTXG00000012685) #30	ENSPTXG00000012686 ##34	ENSPTXG00000012688 ##34	ENSPTXG00000012691 ##34	ENSPTXG00000012693 ##34
Blue-lipped sea krait	MODERN SPECIES	5842												ENSLLTG00000007484	TMEM216 (ENSLLTG00000007511) #20	ENSLLTG00000007559	CPSF7 (ENSLLTG00000007677) #21	SDHAF2 (ENSLLTG00000007706) #22	PPP1R32 (ENSLLTG00000007744) #23	ENSLLTG00000007884
Indian cobra	MODERN SPECIES		SLC15A3 (ENSNNAG00000002332) #10	ENSNNAG00000002346	ENSNNAG00000002362	ENSNNAG00000002381	ENSNNAG00000002423 #15	ENSNNAG00000002446 #14	ENSNNAG00000002458 #14	ENSNNAG00000000291	DDB1 (ENSNNAG00000000380) #16	TKFC (ENSNNAG00000000422) #17	CYB561A3 (ENSNNAG00000000440) #18	TMEM138 (ENSNNAG00000000451) #19	TMEM216 (ENSNNAG00000000466) #20	ENSNNAG00000000478	CPSF7 (ENSNNAG00000000495) #21	SDHAF2 (ENSNNAG00000000510) #22	PPP1R32 (ENSNNAG00000000524) #23	LRRC10B (ENSNNAG00000000538) #24	SYT7 (ENSNNAG00000000547) #25	DAGLA (ENSNNAG00000000559) #27	MYRF (ENSNNAG00000000604) #28	ENSNNAG00000000653 #29	FEN1 (ENSNNAG00000000661) #30	ENSNNAG00000000670 ##34	ENSNNAG00000000682 ##34	ENSNNAG00000000735 ##34	ENSNNAG00000000918 ##34	ENSNNAG00000000925 ##34	ENSNNAG00000000939 ##34	ENSNNAG00000000964 ##34	ENSNNAG00000001017 ##34
tuatara	MODERN SPECIES	1929	TMEM109 (ENSSPUG00000019329) #8	SLC15A3 (ENSSPUG00000019331) #10	ENSSPUG00000019332 #11	ENSSPUG00000019333	ENSSPUG00000019334	VPS37C (ENSSPUG00000019335) #13	ENSSPUG00000019336 #14	VWCE (ENSSPUG00000019337) #15	DDB1 (ENSSPUG00000019338) #16	TKFC (ENSSPUG00000019339) #17	CYB561A3 (ENSSPUG00000019340) #18	ENSSPUG00000019341 #19	ENSSPUG00000019342 #19	TMEM216 (ENSSPUG00000019343) #20	CPSF7 (ENSSPUG00000019344) #21	SDHAF2 (ENSSPUG00000019345) #22	PPP1R32 (ENSSPUG00000019346) #23	LRRC10B (ENSSPUG00000019347) #24	SYT7 (ENSSPUG00000019348) #25
Anura	ANCESTRAL SPECIES	522															ENSGT00730000110905.a #21	ENSGT00390000001149 #22
Frog	MODERN SPECIES	4	dagla (ENSXETG00000006696) #27	myrf (ENSXETG00000006702) #28	tmem258 (ENSXETG00000027540) #29	fen1 (ENSXETG00000006703) #30	sigirr (ENSXETG00000006704)	pkp3 (ENSXETG00000006706)	b4galnt4 (ENSXETG00000006707)	ENSXETG00000036115	ifitm1 (ENSXETG00000030477)	ifitm3 (ENSXETG00000006711)	ifitm5 (ENSXETG00000048235)	ENSXETG00000046924	ENSXETG00000035320	ENSXETG00000041157	cpsf7 (ENSXETG00000006715) #21	sdhaf2 (ENSXETG00000047247) #22	ppp1r32 (ENSXETG00000006725) #23	incenp (ENSXETG00000006735)	ftmt (ENSXETG00000044062) ##37	best1 (ENSXETG00000006740) #36	ENSXETG00000048293	ENSXETG00000039732	ENSXETG00000045297	ENSXETG00000048399	ENSXETG00000034667	ENSXETG00000042321	fads1 (ENSXETG00000030682) #31	fads2 (ENSXETG00000009043) #34	rab3il1 (ENSXETG00000030341) #35	ENSXETG00000043321	ENSXETG00000031447