Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00950000185410	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00980000199681 #31	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36
Primates	ANCESTRAL SPECIES	3	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00950000185410	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00980000199681 #31	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00980000199681 #31	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00860000135909
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Olive baboon	MODERN SPECIES	8	ARHGAP23 (ENSPANG00000022030) #7	SOCS7 (ENSPANG00000022062) #8	GPR179 (ENSPANG00000022074) #9	MRPL45 (ENSPANG00000022083) #10	NPEPPS (ENSPANG00000022080) #11	KPNB1 (ENSPANG00000022099) #12	TBKBP1 (ENSPANG00000022108) #13	TBX21 (ENSPANG00000022107) #14	OSBPL7 (ENSPANG00000022928) #15	MRPL10 (ENSPANG00000022926) #16	LRRC46 (ENSPANG00000022918) #17	SCRN2 (ENSPANG00000022920) #18	SP6 (ENSPANG00000017158) #19	SP2 (ENSPANG00000022922) #20	PNPO (ENSPANG00000022924) #21	CDK5RAP3 (ENSPANG00000022902) #22	COPZ2 (ENSPANG00000022903) #23	NFE2L1 (ENSPANG00000022904) #24	CBX1 (ENSPANG00000022906) #25	SNX11 (ENSPANG00000022898) #26	ENSPANG00000026200 #27	SKAP1 (ENSPANG00000022897) #28	HOXB1 (ENSPANG00000022886) #29	HOXB2 (ENSPANG00000034765) #30	ENSPANG00000045928 #31	HOXB4 (ENSPANG00000022888) #32	HOXB5 (ENSPANG00000022889) #33	HOXB6 (ENSPANG00000022891) #34	HOXB7 (ENSPANG00000041701) #35	HOXB8 (ENSPANG00000022895) #36	HOXB9 (ENSPANG00000022896) #37
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Sooty mangabey	MODERN SPECIES	564	SOCS7 (ENSCATG00000038123) #8	GPR179 (ENSCATG00000016000) #9	ENSCATG00000005112 #10	NPEPPS (ENSCATG00000011160) #11	KPNB1 (ENSCATG00000037124) #12	TBKBP1 (ENSCATG00000040564) #13	TBX21 (ENSCATG00000010529) #14	OSBPL7 (ENSCATG00000033623) #15	MRPL10 (ENSCATG00000035686) #16	LRRC46 (ENSCATG00000031406) #17	SCRN2 (ENSCATG00000038846) #18	SP6 (ENSCATG00000020123) #19	ENSCATG00000003341 #20	PNPO (ENSCATG00000039934) #21	PRR15L (ENSCATG00000020186)	CDK5RAP3 (ENSCATG00000006699) #22	COPZ2 (ENSCATG00000042708) #23	NFE2L1 (ENSCATG00000040775) #24	ENSCATG00000034735 ##25	SNX11 (ENSCATG00000030351) #26	ENSCATG00000019817 #27	SKAP1 (ENSCATG00000044458) #28	HOXB1 (ENSCATG00000035575) #29	HOXB2 (ENSCATG00000035238) #30	HOXB4 (ENSCATG00000040704) #32	HOXB3 (ENSCATG00000031126)	HOXB5 (ENSCATG00000027616) #33	HOXB6 (ENSCATG00000043342) #34	HOXB7 (ENSCATG00000042829) #35	HOXB8 (ENSCATG00000025318) #36	HOXB9 (ENSCATG00000002169) #37
Drill	MODERN SPECIES	1297								OSBPL7 (ENSMLEG00000040663) #15	MRPL10 (ENSMLEG00000042780) #16	LRRC46 (ENSMLEG00000031583) #17	SCRN2 (ENSMLEG00000041491) #18	SP6 (ENSMLEG00000027177) #19	SP2 (ENSMLEG00000032228) #20	PNPO (ENSMLEG00000040872) #21	PRR15L (ENSMLEG00000020212)	CDK5RAP3 (ENSMLEG00000033869) #22	COPZ2 (ENSMLEG00000039090) #23	NFE2L1 (ENSMLEG00000039330) #24	CBX1 (ENSMLEG00000038745) #25	SNX11 (ENSMLEG00000039008) #26	SKAP1 (ENSMLEG00000029308) #28	HOXB1 (ENSMLEG00000037557) #29	HOXB2 (ENSMLEG00000031955) #30	HOXB4 (ENSMLEG00000029897) #32	HOXB3 (ENSMLEG00000026268)	HOXB5 (ENSMLEG00000009970) #33	HOXB6 (ENSMLEG00000029580) #34	HOXB7 (ENSMLEG00000042331) #35	HOXB8 (ENSMLEG00000007179) #36	HOXB9 (ENSMLEG00000030602) #37	PRAC1 (ENSMLEG00000033309)
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Pig-tailed macaque	MODERN SPECIES	494	SOCS7 (ENSMNEG00000032316) #8	GPR179 (ENSMNEG00000042928) #9	ENSMNEG00000044663 #10	NPEPPS (ENSMNEG00000000757) #11	KPNB1 (ENSMNEG00000040927) #12	TBKBP1 (ENSMNEG00000039009) #13	TBX21 (ENSMNEG00000036627) #14	OSBPL7 (ENSMNEG00000042829) #15	MRPL10 (ENSMNEG00000030905) #16	LRRC46 (ENSMNEG00000037035) #17	SCRN2 (ENSMNEG00000031786) #18	SP6 (ENSMNEG00000023861) #19	SP2 (ENSMNEG00000029577) #20	PNPO (ENSMNEG00000037010) #21	PRR15L (ENSMNEG00000028174)	CDK5RAP3 (ENSMNEG00000029039) #22	COPZ2 (ENSMNEG00000038720) #23	NFE2L1 (ENSMNEG00000037921) #24	CBX1 (ENSMNEG00000039720) #25	SNX11 (ENSMNEG00000034920) #26	SKAP1 (ENSMNEG00000015541) #28	ENSMNEG00000033446 #27	HOXB1 (ENSMNEG00000036848) #29	HOXB2 (ENSMNEG00000043416) #30	HOXB3 (ENSMNEG00000032425)	HOXB4 (ENSMNEG00000032435) #32	HOXB5 (ENSMNEG00000039003) #33	HOXB6 (ENSMNEG00000042554) #34	HOXB7 (ENSMNEG00000040001) #35	HOXB8 (ENSMNEG00000034944) #36	HOXB9 (ENSMNEG00000045476) #37
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.a.b	ENSGT00940000160776 #9	ENSGT00390000012679.n #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00980000199681 #31	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000064016	GPR179 (ENSMFAG00000002774) #9	MRPL45 (ENSMFAG00000043718) #10	NPEPPS (ENSMFAG00000003608) #11	KPNB1 (ENSMFAG00000030197) #12	TBKBP1 (ENSMFAG00000001252) #13	TBX21 (ENSMFAG00000042504) #14	OSBPL7 (ENSMFAG00000001330) #15	LRRC46 (ENSMFAG00000031915) #17	ENSMFAG00000030335 #18	SP6 (ENSMFAG00000030247) #19	ENSMFAG00000052999	SP2 (ENSMFAG00000038712) #20	PNPO (ENSMFAG00000039285) #21	PRR15L (ENSMFAG00000030161)	CDK5RAP3 (ENSMFAG00000046364) #22	COPZ2 (ENSMFAG00000045896) #23	NFE2L1 (ENSMFAG00000035583) #24	CBX1 (ENSMFAG00000036790) #25	SNX11 (ENSMFAG00000001845) #26	ENSMFAG00000047205	ENSMFAG00000048147	SKAP1 (ENSMFAG00000038763) #28	HOXB1 (ENSMFAG00000052359) #29	HOXB2 (ENSMFAG00000034146) #30	ENSMFAG00000062776 #31	HOXB4 (ENSMFAG00000041000) #32	HOXB5 (ENSMFAG00000042418) #33	HOXB6 (ENSMFAG00000002294) #34	HOXB7 (ENSMFAG00000039298) #35	HOXB8 (ENSMFAG00000033418) #36
Rhesus	MODERN SPECIES	7	ENSMMUG00000055904	GPR179 (ENSMMUG00000020528) #9	MRPL45 (ENSMMUG00000030213) #10	NPEPPS (ENSMMUG00000005869) #11	KPNB1 (ENSMMUG00000019760) #12	TBKBP1 (ENSMMUG00000019762) #13	TBX21 (ENSMMUG00000057231) #14	OSBPL7 (ENSMMUG00000019039) #15	LRRC46 (ENSMMUG00000061605) #17	MRPL10 (ENSMMUG00000021486) #18	SP6 (ENSMMUG00000061952) #19	ENSMMUG00000053935	SP2 (ENSMMUG00000004765) #20	PNPO (ENSMMUG00000003325) #21	PRR15L (ENSMMUG00000050551)	CDK5RAP3 (ENSMMUG00000004760) #22	COPZ2 (ENSMMUG00000021934) #23	NFE2L1 (ENSMMUG00000021935) #24	CBX1 (ENSMMUG00000019882) #25	SNX11 (ENSMMUG00000020658) #26	SKAP1 (ENSMMUG00000050742) #28	HOXB1 (ENSMMUG00000022212) #29	HOXB2 (ENSMMUG00000057001) #30	HOXB4 (ENSMMUG00000052130) #32	ENSMMUG00000045203 #31	HOXB5 (ENSMMUG00000051420) #33	HOXB6 (ENSMMUG00000062283) #34	HOXB7 (ENSMMUG00000055324) #35	HOXB8 (ENSMMUG00000020868) #36	HOXB9 (ENSMMUG00000052505) #37	PRAC1 (ENSMMUG00000053394)
Vervet Monkey	MODERN SPECIES	7	SOCS7 (ENSCSAG00000002628) #8	GPR179 (ENSCSAG00000002621) #9	ENSCSAG00000002616 ##10	NPEPPS (ENSCSAG00000002610) #11	KPNB1 (ENSCSAG00000002605) #12	TBKBP1 (ENSCSAG00000002598) #13	TBX21 (ENSCSAG00000002587) #14	OSBPL7 (ENSCSAG00000002580) #15	MRPL10 (ENSCSAG00000002576) #16	LRRC46 (ENSCSAG00000002574) #17	SCRN2 (ENSCSAG00000002569) #18	SP6 (ENSCSAG00000019041) #19	SP2 (ENSCSAG00000002567) #20	PNPO (ENSCSAG00000002565) #21	PRR15L (ENSCSAG00000019042)	CDK5RAP3 (ENSCSAG00000002562) #22	COPZ2 (ENSCSAG00000002558) #23	NFE2L1 (ENSCSAG00000002550) #24	CBX1 (ENSCSAG00000002547) #25	SNX11 (ENSCSAG00000002545) #26	SKAP1 (ENSCSAG00000002542) #28	ENSCSAG00000019043 #27	HOXB1 (ENSCSAG00000002538) #29	HOXB2 (ENSCSAG00000002536) #30	HOXB3 (ENSCSAG00000002533)	HOXB4 (ENSCSAG00000002530) #32	HOXB5 (ENSCSAG00000002529) #33	HOXB6 (ENSCSAG00000002526) #34	HOXB7 (ENSCSAG00000002524) #35	HOXB8 (ENSCSAG00000002523) #36	HOXB9 (ENSCSAG00000002521) #37
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.m ##10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Black snub-nosed monkey	MODERN SPECIES	1661									OCRL (ENSRBIG00000041702)	ENSRBIG00000040735	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000039530	SP2 (ENSRBIG00000032526) #20	PNPO (ENSRBIG00000042160) #21	PRR15L (ENSRBIG00000030176)	CDK5RAP3 (ENSRBIG00000039441) #22	COPZ2 (ENSRBIG00000038810) #23	NFE2L1 (ENSRBIG00000034817) #24	ENSRBIG00000027048 #25	SNX11 (ENSRBIG00000030129) #26	SKAP1 (ENSRBIG00000042563) #28	HOXB1 (ENSRBIG00000041849) #29	HOXB2 (ENSRBIG00000029105) #30	HOXB3 (ENSRBIG00000036705)	HOXB4 (ENSRBIG00000036141) #32	HOXB5 (ENSRBIG00000015821) #33	HOXB6 (ENSRBIG00000029050) #34	HOXB7 (ENSRBIG00000039896) #35	HOXB8 (ENSRBIG00000043329) #36	HOXB9 (ENSRBIG00000035654) #37	PRAC1 (ENSRBIG00000041996)
Golden snub-nosed monkey	MODERN SPECIES	585								OSBPL7 (ENSRROG00000017659) #15	MRPL10 (ENSRROG00000033938) #16	LRRC46 (ENSRROG00000039559) #17	SCRN2 (ENSRROG00000037252) #18	SP6 (ENSRROG00000008983) #19	SP2 (ENSRROG00000037481) #20	PNPO (ENSRROG00000044027) #21	PRR15L (ENSRROG00000009484)	CDK5RAP3 (ENSRROG00000044651) #22	COPZ2 (ENSRROG00000030969) #23	NFE2L1 (ENSRROG00000044774) #24	CBX1 (ENSRROG00000041227) #25	SNX11 (ENSRROG00000029464) #26	SKAP1 (ENSRROG00000031517) #28	HOXB1 (ENSRROG00000042747) #29	HOXB2 (ENSRROG00000044849) #30	HOXB3 (ENSRROG00000037630)	HOXB5 (ENSRROG00000030674) #33	HOXB6 (ENSRROG00000028093) #34	HOXB7 (ENSRROG00000035066) #35	HOXB8 (ENSRROG00000045349) #36	HOXB9 (ENSRROG00000044654) #37	PRAC1 (ENSRROG00000039006)	PRAC2 (ENSRROG00000033208)
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000000713.g #22
Gibbon	MODERN SPECIES	3	ENSNLEG00000009704	FOXS1 (ENSNLEG00000009700)	MYLK2 (ENSNLEG00000009678)	TPX2 (ENSNLEG00000009636)	BCL2L1 (ENSNLEG00000009634)	COX4I2 (ENSNLEG00000009628)	ID1 (ENSNLEG00000009620)	HM13 (ENSNLEG00000009589)	REM1 (ENSNLEG00000009580)	DEFB124 (ENSNLEG00000009576)	DEFB123 (ENSNLEG00000009574)	ENSNLEG00000027516	DEFB121 (ENSNLEG00000009569)	ENSNLEG00000009568	DEFB118 (ENSNLEG00000009566)	ENSNLEG00000032575 #22	DEFB115 (ENSNLEG00000009563)	DEFB126 (ENSNLEG00000009561)	DEFB127 (ENSNLEG00000009555)	DEFB128 (ENSNLEG00000009554)	DEFB129 (ENSNLEG00000009553)	DEFB132 (ENSNLEG00000009551)	C20orf96 (ENSNLEG00000009535)	ZCCHC3 (ENSNLEG00000009533)	SOX12 (ENSNLEG00000009528)	NRSN2 (ENSNLEG00000030985)	TRIB3 (ENSNLEG00000009522)	RBCK1 (ENSNLEG00000009499)	TBC1D20 (ENSNLEG00000033685)	ENSNLEG00000009497	ENSNLEG00000009428
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000000713.h.a #22
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246.j.b.b #11	ENSGT00940000155246.i #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713.h.a #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00940000162811	ENSGT00940000161489	ENSGT00390000009842	ENSGT01090000260003.a.b.b.a.a.b.b.a	ENSGT00910000146888	ENSGT00390000002407.c	ENSGT00940000161109	ENSGT00940000156478	ENSGT00940000160613	ENSGT00530000064308	ENSGT00940000162385	ENSGT00730000111628	ENSGT00390000000279	ENSGT00530000064565	ENSGT00390000001502	ENSGT00390000000713.h.a.a.a #22	ENSGT00400000023200	ENSGT00940000164820	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000160517	ENSGT00950000183148.b.b	ENSGT01050000248429	ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT00940000158550	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00950000183147.B	ENSGT00940000154601.a.b.a.a.b
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00940000162011	ENSGT00940000162811	ENSGT00940000161489	ENSGT00390000009842	ENSGT01090000260003.a.b.b.a.a.b.b.a	ENSGT00390000002407.c	ENSGT00940000161109	ENSGT00940000156478	ENSGT00940000160613	ENSGT00530000064308	ENSGT00940000162385	ENSGT00730000111628	ENSGT00390000000279	ENSGT00530000064565	ENSGT00390000001502	ENSGT00390000000713.h.a.a.a #22	ENSGT00400000023200	ENSGT00940000164820	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000160517	ENSGT00950000183148.b.b	ENSGT01050000248429	ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT00940000158550	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00950000183147.B	ENSGT00940000154601.a.b.a.a.b
Pan	ANCESTRAL SPECIES	15	ENSGT00940000162011	ENSGT00940000162811	ENSGT00940000161489	ENSGT00390000009842	ENSGT01090000260003.a.b.b.a.a.b.b.a	ENSGT00390000002407.c	ENSGT00940000161109	ENSGT00940000156478	ENSGT00940000160613	ENSGT00530000064308	ENSGT00940000162385	ENSGT00730000111628	ENSGT00390000000279	ENSGT00530000064565	ENSGT00390000001502	ENSGT00390000000713.h.a.a.a #22	ENSGT00400000023200	ENSGT00940000164820	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000160517	ENSGT00950000183148.b.b	ENSGT01050000248429	ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT00940000158550	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00950000183147.B	ENSGT00940000164560
Chimpanzee	MODERN SPECIES	11	FOXS1 (ENSPTRG00000013363)	MYLK2 (ENSPTRG00000013361)	TPX2 (ENSPTRG00000013360)	BCL2L1 (ENSPTRG00000013359)	COX4I2 (ENSPTRG00000013358)	ID1 (ENSPTRG00000013357)	ENSPTRG00000047072	ENSPTRG00000013356	REM1 (ENSPTRG00000013354)	DEFB124 (ENSPTRG00000013353)	DEFB123 (ENSPTRG00000013352)	DEFB121 (ENSPTRG00000030595)	DEFB119 (ENSPTRG00000013351)	DEFB118 (ENSPTRG00000045857)	DEFB116 (ENSPTRG00000032541)	ENSPTRG00000047609 #22	DEFB115 (ENSPTRG00000033694)	ENSPTRG00000047765	ENSPTRG00000052363	ENSPTRG00000013348	ENSPTRG00000046147	ENSPTRG00000050144	ENSPTRG00000051131	ENSPTRG00000046440	ENSPTRG00000051273	ENSPTRG00000044519	ENSPTRG00000043041	ENSPTRG00000043123	ENSPTRG00000046023	ENSPTRG00000048366	ZNF337 (ENSPTRG00000013344)
Bonobo	MODERN SPECIES	11	DUSP15 (ENSPPAG00000026366)	FOXS1 (ENSPPAG00000033162)	MYLK2 (ENSPPAG00000040852)	TPX2 (ENSPPAG00000030616)	BCL2L1 (ENSPPAG00000000042)	COX4I2 (ENSPPAG00000040770)	ID1 (ENSPPAG00000037030)	HM13 (ENSPPAG00000031171)	REM1 (ENSPPAG00000030426)	DEFB124 (ENSPPAG00000030283)	DEFB123 (ENSPPAG00000030174)	DEFB121 (ENSPPAG00000029675)	ENSPPAG00000029500	DEFB118 (ENSPPAG00000029202)	DEFB116 (ENSPPAG00000029087)	ENSPPAG00000027868 #22	DEFB115 (ENSPPAG00000027269)	ZNF337 (ENSPPAG00000025161)	NANP (ENSPPAG00000022695)	NINL (ENSPPAG00000031856)	GINS1 (ENSPPAG00000039045)	ABHD12 (ENSPPAG00000038923)	PYGB (ENSPPAG00000034450)	ENSPPAG00000042700	ENTPD6 (ENSPPAG00000031043)	VSX1 (ENSPPAG00000040169)	ACSS1 (ENSPPAG00000027610)	APMAP (ENSPPAG00000037399)	CST7 (ENSPPAG00000030321)	SYNDIG1 (ENSPPAG00000030602)	CST5 (ENSPPAG00000030471)
Gorilla	MODERN SPECIES	11	ENSGGOG00000011846	FOXS1 (ENSGGOG00000023442)	MYLK2 (ENSGGOG00000011831)	TPX2 (ENSGGOG00000011815)	ENSGGOG00000042926	BCL2L1 (ENSGGOG00000026245)	COX4I2 (ENSGGOG00000009052)	ID1 (ENSGGOG00000016121)	HM13 (ENSGGOG00000000991)	REM1 (ENSGGOG00000000990)	DEFB123 (ENSGGOG00000000884)	DEFB121 (ENSGGOG00000002943)	DEFB119 (ENSGGOG00000005372)	DEFB118 (ENSGGOG00000042168)	DEFB116 (ENSGGOG00000006237)	ENSGGOG00000041871 #22	DEFB115 (ENSGGOG00000024671)	ENSGGOG00000016857	ZNF337 (ENSGGOG00000014016)	NANP (ENSGGOG00000012837)	NINL (ENSGGOG00000002477)	GINS1 (ENSGGOG00000002473)	ABHD12 (ENSGGOG00000014299)	PYGB (ENSGGOG00000014285)	ENTPD6 (ENSGGOG00000014904)	VSX1 (ENSGGOG00000001283)	ACSS1 (ENSGGOG00000001280)	APMAP (ENSGGOG00000001278)	CST7 (ENSGGOG00000001275)	SYNDIG1 (ENSGGOG00000000617)	GGTLC1 (ENSGGOG00000027711)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT01030000234570.d.b.a.b.a	ENSGT01090000259987.b.b.a.a.b	ENSGT00390000004027	ENSGT00940000155246.j.b.a #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713.h.a.a.b #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT01030000234570.d.b.a.b.a	ENSGT01090000259987.b.b.a.a.b	ENSGT00390000004027	ENSGT00940000155246.j.b.a #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713.h.a.a.b #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Pan	ANCESTRAL SPECIES	3	ENSGT01090000259987.b.b.a.a.b	ENSGT00390000004027	ENSGT00940000153464.A.b.b	ENSGT00940000155246.j.b.a #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713.h.a.a.b #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Bonobo	MODERN SPECIES	8	ENSPPAG00000019537	ENSPPAG00000041328	ENSPPAG00000031240	ENSPPAG00000041383 #11	KPNB1 (ENSPPAG00000028842) #12	ENSPPAG00000040088 #13	TBX21 (ENSPPAG00000033988) #14	OSBPL7 (ENSPPAG00000027887) #15	MRPL10 (ENSPPAG00000034452) #16	LRRC46 (ENSPPAG00000038983) #17	SCRN2 (ENSPPAG00000028214) #18	SP6 (ENSPPAG00000026169) #19	SP2 (ENSPPAG00000027065) #20	PNPO (ENSPPAG00000038148) #21	PRR15L (ENSPPAG00000003316)	ENSPPAG00000029145 #22	COPZ2 (ENSPPAG00000043351) #23	NFE2L1 (ENSPPAG00000031737) #24	ENSPPAG00000030413 #25	SNX11 (ENSPPAG00000033185) #26	SKAP1 (ENSPPAG00000039277) #28	HOXB1 (ENSPPAG00000039129) #29	HOXB2 (ENSPPAG00000027417) #30	HOXB3 (ENSPPAG00000032630)	HOXB4 (ENSPPAG00000040659) #32	HOXB5 (ENSPPAG00000039181) #33	HOXB6 (ENSPPAG00000032229) #34	HOXB7 (ENSPPAG00000010963) #35	HOXB8 (ENSPPAG00000034804) #36	HOXB9 (ENSPPAG00000028486) #37	PRAC1 (ENSPPAG00000014004)
Chimpanzee	MODERN SPECIES	8	EFCAB13 (ENSPTRG00000009329)	ENSPTRG00000045761	ENSPTRG00000048037	NPEPPS (ENSPTRG00000009330) #11	KPNB1 (ENSPTRG00000009333) #12	TBKBP1 (ENSPTRG00000009334) #13	TBX21 (ENSPTRG00000009335) #14	OSBPL7 (ENSPTRG00000009336) #15	MRPL10 (ENSPTRG00000009337) #16	LRRC46 (ENSPTRG00000009338) #17	SCRN2 (ENSPTRG00000009339) #18	SP6 (ENSPTRG00000009340) #19	SP2 (ENSPTRG00000009342) #20	PNPO (ENSPTRG00000009343) #21	PRR15L (ENSPTRG00000047216)	CDK5RAP3 (ENSPTRG00000009345) #22	COPZ2 (ENSPTRG00000009346) #23	NFE2L1 (ENSPTRG00000022631) #24	CBX1 (ENSPTRG00000052115) #25	SNX11 (ENSPTRG00000009349) #26	SKAP1 (ENSPTRG00000009350) #28	HOXB1 (ENSPTRG00000009351) #29	HOXB2 (ENSPTRG00000009352) #30	HOXB3 (ENSPTRG00000052423)	HOXB4 (ENSPTRG00000009354) #32	HOXB5 (ENSPTRG00000009355) #33	HOXB6 (ENSPTRG00000009356) #34	HOXB7 (ENSPTRG00000009357) #35	HOXB8 (ENSPTRG00000048497) #36	HOXB9 (ENSPTRG00000009358) #37	PRAC1 (ENSPTRG00000009359)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000000713.h.a.b #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000000713.h.a.b #22
Human	MODERN SPECIES	8	MYL4 (ENSG00000198336)	ITGB3 (ENSG00000259207)	EFCAB13 (ENSG00000178852)	NPEPPS (ENSG00000141279) #11	KPNB1 (ENSG00000108424) #12	TBKBP1 (ENSG00000198933) #13	TBX21 (ENSG00000073861) #14	OSBPL7 (ENSG00000006025) #15	MRPL10 (ENSG00000159111) #16	LRRC46 (ENSG00000141294) #17	SCRN2 (ENSG00000141295) #18	SP6 (ENSG00000189120) #19	SP2 (ENSG00000167182) #20	PNPO (ENSG00000108439) #21	PRR15L (ENSG00000167183)	CDK5RAP3 (ENSG00000108465) #22	COPZ2 (ENSG00000005243) #23	NFE2L1 (ENSG00000082641) #24	CBX1 (ENSG00000108468) #25	SNX11 (ENSG00000002919) #26	SKAP1 (ENSG00000141293) #28	HOXB1 (ENSG00000120094) #29	HOXB2 (ENSG00000173917) #30	HOXB3 (ENSG00000120093)	HOXB4 (ENSG00000182742) #32	HOXB5 (ENSG00000120075) #33	HOXB6 (ENSG00000108511) #34	HOXB7 (ENSG00000260027) #35	HOXB8 (ENSG00000120068) #36	HOXB9 (ENSG00000170689) #37	PRAC1 (ENSG00000159182)
Orangutan	MODERN SPECIES	11	FOXS1 (ENSPPYG00000010894)	MYLK2 (ENSPPYG00000010893)	TPX2 (ENSPPYG00000010892)	BCL2L1 (ENSPPYG00000010890)	COX4I2 (ENSPPYG00000029465)	ID1 (ENSPPYG00000010889)	HM13 (ENSPPYG00000010888)	REM1 (ENSPPYG00000010886)	DEFB124 (ENSPPYG00000034384)	DEFB123 (ENSPPYG00000010884)	ENSPPYG00000010883	DEFB121 (ENSPPYG00000010882)	ENSPPYG00000010881	DEFB118 (ENSPPYG00000010880)	DEFB116 (ENSPPYG00000034032)	ENSPPYG00000032511 #22	DEFB115 (ENSPPYG00000010879)	DEFB125 (ENSPPYG00000010878)	DEFB126 (ENSPPYG00000010877)	DEFB127 (ENSPPYG00000010876)	DEFB129 (ENSPPYG00000010874)	DEFB132 (ENSPPYG00000010873)	ZCCHC3 (ENSPPYG00000010871)	C20orf96 (ENSPPYG00000010872)	SOX12 (ENSPPYG00000010870)	NRSN2 (ENSPPYG00000030783)	TRIB3 (ENSPPYG00000010869)	RBCK1 (ENSPPYG00000010868)	ENSPPYG00000032461	TBC1D20 (ENSPPYG00000010867)	CSNK2A1 (ENSPPYG00000010866)
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246.j.b.b #11	ENSGT00940000155246.i #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603.b #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713.h.b #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000165611
Hominidae	ANCESTRAL SPECIES																	ENSGT00390000000713.h.b #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000000713.h.b #22
Gorilla	MODERN SPECIES	18	ITGB3 (ENSGGOG00000007757)	ENSGGOG00000023488	EFCAB13 (ENSGGOG00000022715)	ENSGGOG00000022991 #11	KPNB1 (ENSGGOG00000008089) #12	TBKBP1 (ENSGGOG00000002206) #13	TBX21 (ENSGGOG00000002208) #14	OSBPL7 (ENSGGOG00000015344) #15	MRPL10 (ENSGGOG00000015353) #16	LRRC46 (ENSGGOG00000012667) #17	SCRN2 (ENSGGOG00000004547) #18	SP6 (ENSGGOG00000036261) #19	SP2 (ENSGGOG00000005330) #20	PNPO (ENSGGOG00000003786) #21	PRR15L (ENSGGOG00000037816)	ENSGGOG00000022994 #22	COPZ2 (ENSGGOG00000002264) #23	NFE2L1 (ENSGGOG00000002268) #24	CBX1 (ENSGGOG00000024063) #25	ENSGGOG00000025896	SKAP1 (ENSGGOG00000012624) #28	HOXB1 (ENSGGOG00000009904) #29	HOXB2 (ENSGGOG00000009910) #30	HOXB3 (ENSGGOG00000012838)	HOXB5 (ENSGGOG00000023582) #33	HOXB6 (ENSGGOG00000002634) #34	HOXB7 (ENSGGOG00000002637) #35	HOXB8 (ENSGGOG00000039810) #36	ENSGGOG00000036688 #37	PRAC1 (ENSGGOG00000027105)	ENSGGOG00000042122
Orangutan	MODERN SPECIES	8	ENSPPYG00000039847	GPR179 (ENSPPYG00000008874) #9	MRPL45 (ENSPPYG00000008876) #10	NPEPPS (ENSPPYG00000008877) #11	KPNB1 (ENSPPYG00000025935) #12	TBKBP1 (ENSPPYG00000008878) #13	TBX21 (ENSPPYG00000008879) #14	OSBPL7 (ENSPPYG00000008880) #15	MRPL10 (ENSPPYG00000008881) #16	LRRC46 (ENSPPYG00000032761) #17	SCRN2 (ENSPPYG00000008883) #18	SP6 (ENSPPYG00000008884) #19	SP2 (ENSPPYG00000008885) #20	PNPO (ENSPPYG00000040967) #21	PRR15L (ENSPPYG00000008887)	CDK5RAP3 (ENSPPYG00000008888) #22	ENSPPYG00000008889 #23	NFE2L1 (ENSPPYG00000036998) #24	ENSPPYG00000008891 ##25	SNX11 (ENSPPYG00000008892) #26	SKAP1 (ENSPPYG00000008893) #28	HOXB1 (ENSPPYG00000008894) #29	HOXB2 (ENSPPYG00000008895) #30	HOXB3 (ENSPPYG00000008896)	HOXB4 (ENSPPYG00000008897) #32	HOXB5 (ENSPPYG00000008898) #33	HOXB6 (ENSPPYG00000008899) #34	HOXB7 (ENSPPYG00000008901) #35	HOXB8 (ENSPPYG00000038542) #36	HOXB9 (ENSPPYG00000008902) #37	PRAC1 (ENSPPYG00000008903)
Gibbon	MODERN SPECIES	105					KPNB1 (ENSNLEG00000001446) #12	ENSNLEG00000032565 #13	ENSNLEG00000001655 #14	OSBPL7 (ENSNLEG00000001657) #15	MRPL10 (ENSNLEG00000001803) #16	LRRC46 (ENSNLEG00000001902) #17	SCRN2 (ENSNLEG00000001940) #18	SP6 (ENSNLEG00000002050) #19	ENSNLEG00000002058 #20	PNPO (ENSNLEG00000002062) #21	PRR15L (ENSNLEG00000002102)	ENSNLEG00000002109 #22	ENSNLEG00000002409 #23	NFE2L1 (ENSNLEG00000002415) #24	ENSNLEG00000002435 #25	SNX11 (ENSNLEG00000002479) #26	SKAP1 (ENSNLEG00000002519) #28	ENSNLEG00000018815 #29	HOXB2 (ENSNLEG00000002566) #30	HOXB4 (ENSNLEG00000002570) #32	HOXB5 (ENSNLEG00000002574) #33	HOXB6 (ENSNLEG00000002585) #34	ENSNLEG00000029075	ENSNLEG00000036120	HOXB13 (ENSNLEG00000002594)	TTLL6 (ENSNLEG00000002601)	CALCOCO2 (ENSNLEG00000002619)
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898.b #12	ENSGT00550000074898.a #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898.b #12	ENSGT00550000074898.a #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000154172.gb.b.b.b	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Marmoset	MODERN SPECIES	17	GPR179 (ENSCJAG00000008100) #9	MRPL45 (ENSCJAG00000008080) #10	ENSCJAG00000048573	NPEPPS (ENSCJAG00000007985) #11	KPNB1 (ENSCJAG00000007834) #12	TBKBP1 (ENSCJAG00000045710) #13	TBX21 (ENSCJAG00000007796) #14	OSBPL7 (ENSCJAG00000007585) #15	MRPL10 (ENSCJAG00000007787) #16	LRRC46 (ENSCJAG00000007776) #17	SCRN2 (ENSCJAG00000047705) #18	SP6 (ENSCJAG00000043946) #19	SP2 (ENSCJAG00000007713) #20	PNPO (ENSCJAG00000007693) #21	PRR15L (ENSCJAG00000044487)	CDK5RAP3 (ENSCJAG00000007669) #22	COPZ2 (ENSCJAG00000007567) #23	ENSCJAG00000058197	NFE2L1 (ENSCJAG00000007542) #24	CBX1 (ENSCJAG00000042052) #25	SNX11 (ENSCJAG00000039549) #26	SKAP1 (ENSCJAG00000007504) #28	ENSCJAG00000038853	HOXB1 (ENSCJAG00000007496) #29	HOXB2 (ENSCJAG00000007494) #30	HOXB3 (ENSCJAG00000007487)	HOXB4 (ENSCJAG00000007480) #32	HOXB5 (ENSCJAG00000007472) #33	HOXB6 (ENSCJAG00000007467) #34	HOXB7 (ENSCJAG00000007457) #35	HOXB8 (ENSCJAG00000045730) #36
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898.b #12	ENSGT00550000074898.a #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000154172.gb.b.b.b	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Bolivian squirrel monkey	MODERN SPECIES	86	GPR179 (ENSSBOG00000022698) #9	MRPL45 (ENSSBOG00000028242) #10	NPEPPS (ENSSBOG00000032725) #11	KPNB1 (ENSSBOG00000030025) #12	ENSSBOG00000014766	ENSSBOG00000029189 #13	TBX21 (ENSSBOG00000028744) #14	OSBPL7 (ENSSBOG00000033435) #15	MRPL10 (ENSSBOG00000004214) #16	LRRC46 (ENSSBOG00000026980) #17	SCRN2 (ENSSBOG00000027391) #18	SP6 (ENSSBOG00000014210) #19	SP2 (ENSSBOG00000029098) #20	PNPO (ENSSBOG00000021213) #21	PRR15L (ENSSBOG00000019240)	CDK5RAP3 (ENSSBOG00000033272) #22	COPZ2 (ENSSBOG00000033633) #23	NFE2L1 (ENSSBOG00000023867) #24	ENSSBOG00000031880 ##25	SNX11 (ENSSBOG00000026967) #26	SKAP1 (ENSSBOG00000029434) #28	ENSSBOG00000019520	HOXB1 (ENSSBOG00000034875) #29	HOXB2 (ENSSBOG00000025070) #30	HOXB3 (ENSSBOG00000030844)	HOXB4 (ENSSBOG00000024432) #32	HOXB5 (ENSSBOG00000018198) #33	HOXB6 (ENSSBOG00000031900) #34	HOXB7 (ENSSBOG00000020028) #35	HOXB8 (ENSSBOG00000034884) #36	HOXB9 (ENSSBOG00000030218) #37
Capuchin	MODERN SPECIES	228	ARHGAP23 (ENSCCAG00000025162) #7	SOCS7 (ENSCCAG00000033044) #8	GPR179 (ENSCCAG00000037056) #9	MRPL45 (ENSCCAG00000034579) #10	NPEPPS (ENSCCAG00000035472) #11	ENSCCAG00000029263 #12	TBKBP1 (ENSCCAG00000026129) #13	TBX21 (ENSCCAG00000026112) #14	OSBPL7 (ENSCCAG00000034097) #15	MRPL10 (ENSCCAG00000023150) #16	LRRC46 (ENSCCAG00000030568) #17	SCRN2 (ENSCCAG00000031435) #18	SP6 (ENSCCAG00000020330) #19	SP2 (ENSCCAG00000038047) #20	PNPO (ENSCCAG00000029175) #21	CDK5RAP3 (ENSCCAG00000038053) #22	COPZ2 (ENSCCAG00000021292) #23	NFE2L1 (ENSCCAG00000029090) #24	CBX1 (ENSCCAG00000025085) #25	SNX11 (ENSCCAG00000030167) #26	SKAP1 (ENSCCAG00000035663) #28	ENSCCAG00000019181	HOXB1 (ENSCCAG00000027667) #29	HOXB2 (ENSCCAG00000024035) #30	HOXB3 (ENSCCAG00000013598)	HOXB4 (ENSCCAG00000020311) #32	HOXB5 (ENSCCAG00000036867) #33	HOXB6 (ENSCCAG00000022842) #34	HOXB8 (ENSCCAG00000026051) #36	HOXB9 (ENSCCAG00000035938) #37	HOXB7 (ENSCCAG00000023947) #35
Mas night monkey	MODERN SPECIES	481	SOCS7 (ENSANAG00000028278) #8	GPR179 (ENSANAG00000033667) #9	MRPL45 (ENSANAG00000028167) #10	NPEPPS (ENSANAG00000028371) #11	ENSANAG00000019395	ENSANAG00000024932 #12	TBKBP1 (ENSANAG00000020710) #13	TBX21 (ENSANAG00000037999) #14	OSBPL7 (ENSANAG00000021406) #15	MRPL10 (ENSANAG00000022792) #16	LRRC46 (ENSANAG00000028496) #17	SCRN2 (ENSANAG00000021482) #18	SP6 (ENSANAG00000019338) #19	SP2 (ENSANAG00000032738) #20	PNPO (ENSANAG00000026080) #21	CDK5RAP3 (ENSANAG00000021880) #22	COPZ2 (ENSANAG00000023309) #23	NFE2L1 (ENSANAG00000027606) #24	ENSANAG00000036853 ##25	SNX11 (ENSANAG00000022588) #26	SKAP1 (ENSANAG00000026853) #28	ENSANAG00000023400	HOXB1 (ENSANAG00000032306) #29	HOXB2 (ENSANAG00000023626) #30	HOXB3 (ENSANAG00000032072)	HOXB4 (ENSANAG00000024005) #32	HOXB5 (ENSANAG00000024299) #33	HOXB6 (ENSANAG00000023964) #34	HOXB7 (ENSANAG00000025513) #35	HOXB8 (ENSANAG00000028346) #36	HOXB9 (ENSANAG00000035156) #37
Tarsier	MODERN SPECIES	7208									OSBPL7 (ENSTSYG00000014378) #15	MRPL10 (ENSTSYG00000034759) #16	LRRC46 (ENSTSYG00000003710) #17	SCRN2 (ENSTSYG00000003730) #18	SP6 (ENSTSYG00000031192) #19	SP2 (ENSTSYG00000013766) #20	PNPO (ENSTSYG00000002012) #21	CDK5RAP3 (ENSTSYG00000010313) #22	COPZ2 (ENSTSYG00000030074) #23	NFE2L1 (ENSTSYG00000011468) #24	CBX1 (ENSTSYG00000034806) #25	SNX11 (ENSTSYG00000035487) #26	SKAP1 (ENSTSYG00000008218) #28
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590.h #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00950000185410	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590.h #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00950000185410	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Mouse lemur	MODERN SPECIES	7	ARHGAP23 (ENSMICG00000000638) #7	SOCS7 (ENSMICG00000000636) #8	GPR179 (ENSMICG00000000628) #9	MRPL45 (ENSMICG00000000626) #10	NPEPPS (ENSMICG00000012034) #11	KPNB1 (ENSMICG00000012059) #12	TBKBP1 (ENSMICG00000012069) #13	TBX21 (ENSMICG00000035345) #14	OSBPL7 (ENSMICG00000004799) #15	MRPL10 (ENSMICG00000048091) #16	LRRC46 (ENSMICG00000004816) #17	SCRN2 (ENSMICG00000004823) #18	SP6 (ENSMICG00000047695) #19	SP2 (ENSMICG00000036051) #20	ENSMICG00000014065 #21	CDK5RAP3 (ENSMICG00000014077) #22	COPZ2 (ENSMICG00000014097) #23	ENSMICG00000009510 #25	NFE2L1 (ENSMICG00000014716) #24	SNX11 (ENSMICG00000014741) #26	ENSMICG00000029923	SKAP1 (ENSMICG00000047158) #28	HOXB1 (ENSMICG00000048152) #29	HOXB2 (ENSMICG00000038222) #30	HOXB3 (ENSMICG00000007522)	HOXB4 (ENSMICG00000043173) #32	HOXB5 (ENSMICG00000047139) #33	HOXB6 (ENSMICG00000042216) #34	HOXB7 (ENSMICG00000007539) #35	HOXB8 (ENSMICG00000045961) #36	HOXB9 (ENSMICG00000038413) #37
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590.h #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00950000185410	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Coquerels sifaka	MODERN SPECIES	120	SOCS7 (ENSPCOG00000023874) #8	GPR179 (ENSPCOG00000007958) #9	MRPL45 (ENSPCOG00000014660) #10	ENSPCOG00000027158 #11	ENSPCOG00000014331 #11	KPNB1 (ENSPCOG00000026259) #12	TBKBP1 (ENSPCOG00000026427) #13	TBX21 (ENSPCOG00000014387) #14	OSBPL7 (ENSPCOG00000019714) #15	MRPL10 (ENSPCOG00000025492) #16	LRRC46 (ENSPCOG00000015829) #17	SCRN2 (ENSPCOG00000014438) #18	SP6 (ENSPCOG00000008529) #19	SP2 (ENSPCOG00000017198) #20	PNPO (ENSPCOG00000017906) #21	CDK5RAP3 (ENSPCOG00000016598) #22	COPZ2 (ENSPCOG00000018359) #23	NFE2L1 (ENSPCOG00000021740) #24	ENSPCOG00000010902 #25	SNX11 (ENSPCOG00000011015) #26	SKAP1 (ENSPCOG00000022221) #28	HOXB1 (ENSPCOG00000025930) #29	HOXB2 (ENSPCOG00000017380) #30	HOXB3 (ENSPCOG00000020113)	HOXB4 (ENSPCOG00000022963) #32	HOXB5 (ENSPCOG00000015692) #33	HOXB6 (ENSPCOG00000019931) #34	HOXB7 (ENSPCOG00000028248) #35	HOXB8 (ENSPCOG00000024853) #36	HOXB9 (ENSPCOG00000027130) #37	HOXB13 (ENSPCOG00000018182)
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	107	GPR179 (ENSPSMG00000008075) #9	MRPL45 (ENSPSMG00000008060) #10	NPEPPS (ENSPSMG00000007984) #11	KPNB1 (ENSPSMG00000007848) #12	TBKBP1 (ENSPSMG00000007810) #13	TBX21 (ENSPSMG00000007791) #14	OSBPL7 (ENSPSMG00000007730) #15	MRPL10 (ENSPSMG00000007514) #16	LRRC46 (ENSPSMG00000007500) #17	SCRN2 (ENSPSMG00000007491) #18	SP6 (ENSPSMG00000007463) #19	ENSPSMG00000007462 #20	SP2 (ENSPSMG00000007456) #20	PNPO (ENSPSMG00000007445) #21	PRR15L (ENSPSMG00000007406)	ENSPSMG00000007395 #22	ENSPSMG00000007342	ENSPSMG00000007339 #23	NFE2L1 (ENSPSMG00000007285) #24
Greater bamboo lemur	MODERN SPECIES	2218																ENSPSMG00000003010 #22
Bushbaby	MODERN SPECIES	133	SOCS7 (ENSOGAG00000012422) #8	GPR179 (ENSOGAG00000031431) #9	MRPL45 (ENSOGAG00000015816) #10	NPEPPS (ENSOGAG00000006365) #11	KPNB1 (ENSOGAG00000006153) #12	TBKBP1 (ENSOGAG00000032523) #13	TBX21 (ENSOGAG00000006160) #14	OSBPL7 (ENSOGAG00000006166) #15	MRPL10 (ENSOGAG00000006173) #16	LRRC46 (ENSOGAG00000006177) #17	SCRN2 (ENSOGAG00000006181) #18	SP6 (ENSOGAG00000030282) #19	SP2 (ENSOGAG00000030380) #20	PNPO (ENSOGAG00000006186) #21	PRR15L (ENSOGAG00000006187)	CDK5RAP3 (ENSOGAG00000004951) #22	COPZ2 (ENSOGAG00000004954) #23	NFE2L1 (ENSOGAG00000025191) #24	CBX1 (ENSOGAG00000005658) #25	SNX11 (ENSOGAG00000015854) #26	SKAP1 (ENSOGAG00000015855) #28	HOXB1 (ENSOGAG00000031645) #29	HOXB2 (ENSOGAG00000029280) #30	HOXB3 (ENSOGAG00000032090)	HOXB4 (ENSOGAG00000033709) #32	HOXB5 (ENSOGAG00000032432) #33	HOXB6 (ENSOGAG00000008661) #34	HOXB7 (ENSOGAG00000008667) #35	HOXB8 (ENSOGAG00000029480) #36	HOXB9 (ENSOGAG00000008668) #37	ENSOGAG00000034464
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Tree shrew	MODERN SPECIES	256														PNPO (ENSTBEG00000004428) #21	PRR15L (ENSTBEG00000004526)	CDK5RAP3 (ENSTBEG00000004569) #22	COPZ2 (ENSTBEG00000004683) #23
Glires	ANCESTRAL SPECIES	3	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029	ENSGT00940000161434	ENSGT00950000183025.a
Rabbit	MODERN SPECIES	10	SOCS7 (ENSOCUG00000015724) #8	GPR179 (ENSOCUG00000015704) #9	MRPL45 (ENSOCUG00000015690) #10	NPEPPS (ENSOCUG00000015748) #11	KPNB1 (ENSOCUG00000015425) #12	TBKBP1 (ENSOCUG00000014771) #13	TBX21 (ENSOCUG00000012907) #14	OSBPL7 (ENSOCUG00000009447) #15	MRPL10 (ENSOCUG00000009452) #16	LRRC46 (ENSOCUG00000009453) #17	SCRN2 (ENSOCUG00000009457) #18	SP6 (ENSOCUG00000023482) #19	SP2 (ENSOCUG00000027415) #20	PNPO (ENSOCUG00000017484) #21	PRR15L (ENSOCUG00000017489)	CDK5RAP3 (ENSOCUG00000012325) #22	COPZ2 (ENSOCUG00000001802) #23	NFE2L1 (ENSOCUG00000022298) #24	CBX1 (ENSOCUG00000008021) #25	SNX11 (ENSOCUG00000002309) #26	SKAP1 (ENSOCUG00000001717) #28	HOXB1 (ENSOCUG00000001720) #29	HOXB2 (ENSOCUG00000024951) #30	HOXB3 (ENSOCUG00000023337)	HOXB6 (ENSOCUG00000011560) #34	HOXB5 (ENSOCUG00000023093) #33	HOXB8 (ENSOCUG00000029186) #36	HOXB9 (ENSOCUG00000027316) #37	HOXB13 (ENSOCUG00000012816)	TTLL6 (ENSOCUG00000006289)	ENSOCUG00000038154
Pika	MODERN SPECIES	633					NPEPPS (ENSOPRG00000003735) #11	KPNB1 (ENSOPRG00000003795) #12	TBKBP1 (ENSOPRG00000003843) #13	TBX21 (ENSOPRG00000003888) #14	OSBPL7 (ENSOPRG00000003904) #15	MRPL10 (ENSOPRG00000003949) #16	LRRC46 (ENSOPRG00000003963) #17	SCRN2 (ENSOPRG00000003992) #18	SP6 (ENSOPRG00000004019) #19	SP2 (ENSOPRG00000004048) #20	PNPO (ENSOPRG00000004080) #21	CDK5RAP3 (ENSOPRG00000004107) #22
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.o #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679.o #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Arctic ground squirrel	MODERN SPECIES	46	SOCS7 (ENSUPAG00010006716) #8	GPR179 (ENSUPAG00010006698) #9	ENSUPAG00010006685 #10	NPEPPS (ENSUPAG00010006649) #11	KPNB1 (ENSUPAG00010006624) #12	TBKBP1 (ENSUPAG00010006591) #13	TBX21 (ENSUPAG00010006582) #14	OSBPL7 (ENSUPAG00010006545) #15	MRPL10 (ENSUPAG00010006539) #16	LRRC46 (ENSUPAG00010006533) #17	SCRN2 (ENSUPAG00010006526) #18	SP6 (ENSUPAG00010006522) #19	SP2 (ENSUPAG00010006507) #20	PNPO (ENSUPAG00010006483) #21	PRR15L (ENSUPAG00010006473)	CDK5RAP3 (ENSUPAG00010006466) #22	COPZ2 (ENSUPAG00010006455) #23	NFE2L1 (ENSUPAG00010006396) #24	CBX1 (ENSUPAG00010006381) #25	SNX11 (ENSUPAG00010006370) #26	SKAP1 (ENSUPAG00010006345) #28	HOXB1 (ENSUPAG00010006340) #29	HOXB2 (ENSUPAG00010006336) #30	HOXB3 (ENSUPAG00010006328)	HOXB4 (ENSUPAG00010006325) #32	HOXB5 (ENSUPAG00010006320) #33	HOXB6 (ENSUPAG00010006317) #34	HOXB7 (ENSUPAG00010006312) #35	HOXB8 (ENSUPAG00010006310) #36	HOXB9 (ENSUPAG00010006305) #37	HOXB13 (ENSUPAG00010006301)
Squirrel	MODERN SPECIES	90	SOCS7 (ENSSTOG00000000068) #8	GPR179 (ENSSTOG00000024299) #9	ENSSTOG00000000304 #10	NPEPPS (ENSSTOG00000004901) #11	KPNB1 (ENSSTOG00000007896) #12	TBKBP1 (ENSSTOG00000023713) #13	TBX21 (ENSSTOG00000001626) #14	OSBPL7 (ENSSTOG00000001636) #15	MRPL10 (ENSSTOG00000024617) #16	LRRC46 (ENSSTOG00000002068) #17	SCRN2 (ENSSTOG00000027108) #18	SP6 (ENSSTOG00000001607) #19	SP2 (ENSSTOG00000015926) #20	PNPO (ENSSTOG00000006221) #21	PRR15L (ENSSTOG00000006235)	CDK5RAP3 (ENSSTOG00000006244) #22	ENSSTOG00000027550 #23	NFE2L1 (ENSSTOG00000013664) #24	CBX1 (ENSSTOG00000023986) #25	SNX11 (ENSSTOG00000013684) #26	SKAP1 (ENSSTOG00000013692) #28	HOXB1 (ENSSTOG00000028630) #29	HOXB2 (ENSSTOG00000023586) #30	HOXB3 (ENSSTOG00000025093)	HOXB4 (ENSSTOG00000009734) #32	HOXB5 (ENSSTOG00000009740) #33	HOXB6 (ENSSTOG00000020303) #34	HOXB7 (ENSSTOG00000025657) #35	HOXB8 (ENSSTOG00000028337) #36	HOXB9 (ENSSTOG00000009741) #37	HOXB13 (ENSSTOG00000014942)
Alpin marmot	MODERN SPECIES	42	NMT1 (ENSMMMG00000002632)	PLCD3 (ENSMMMG00000002605)	ACBD4 (ENSMMMG00000002555)	HEXIM1 (ENSMMMG00000002544)	HEXIM2 (ENSMMMG00000002534)	FMNL1 (ENSMMMG00000002279)	ENSMMMG00000002245	MAP3K14 (ENSMMMG00000002213)	ENSMMMG00000001792	ENSMMMG00000001756	ENSMMMG00000001551	ENSMMMG00000001520	LYZL6 (ENSMMMG00000001501)	RPRML (ENSMMMG00000001486)	GOSR2 (ENSMMMG00000001471)	CDK5RAP3 (ENSMMMG00000001404) #22	COPZ2 (ENSMMMG00000001352) #23	NFE2L1 (ENSMMMG00000001284) #24	CBX1 (ENSMMMG00000001254) #25	SNX11 (ENSMMMG00000001243) #26	SKAP1 (ENSMMMG00000001168) #28	HOXB1 (ENSMMMG00000001151) #29	HOXB3 (ENSMMMG00000001139)	HOXB4 (ENSMMMG00000001129) #32	HOXB5 (ENSMMMG00000001112) #33	HOXB6 (ENSMMMG00000001098) #34	HOXB7 (ENSMMMG00000001087) #35	HOXB13 (ENSMMMG00000001064)	TTLL6 (ENSMMMG00000001013)	ENSMMMG00000000759	ATP5MC1 (ENSMMMG00000000731)
Eurasian red squirrel	MODERN SPECIES	12	GPR179 (ENSSVLG00005016761) #9	ENSSVLG00005017021	MRPL45 (ENSSVLG00005017084) #10	NPEPPS (ENSSVLG00005017198) #11	KPNB1 (ENSSVLG00005017557) #12	TBKBP1 (ENSSVLG00005017602) #13	TBX21 (ENSSVLG00005017653) #14	OSBPL7 (ENSSVLG00005017757) #15	MRPL10 (ENSSVLG00005017985) #16	LRRC46 (ENSSVLG00005018036) #17	SCRN2 (ENSSVLG00005018077) #18	SP6 (ENSSVLG00005018194) #19	ENSSVLG00005018218 #20	PNPO (ENSSVLG00005018295) #21	PRR15L (ENSSVLG00005018399)	CDK5RAP3 (ENSSVLG00005018459) #22	COPZ2 (ENSSVLG00005018641) #23	NFE2L1 (ENSSVLG00005018798) #24	CBX1 (ENSSVLG00005019034) #25	SNX11 (ENSSVLG00005019122) #26	SKAP1 (ENSSVLG00005019232) #28	HOXB1 (ENSSVLG00005019304) #29	HOXB2 (ENSSVLG00005019378) #30	HOXB3 (ENSSVLG00005019421)	HOXB4 (ENSSVLG00005019455) #32	HOXB5 (ENSSVLG00005019546) #33	HOXB6 (ENSSVLG00005019586) #34	HOXB7 (ENSSVLG00005019618) #35	HOXB8 (ENSSVLG00005019675) #36	HOXB9 (ENSSVLG00005019725) #37	HOXB13 (ENSSVLG00005019820)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Guinea pig	MODERN SPECIES	53	SOCS7 (ENSCPOG00000011473) #8	GPR179 (ENSCPOG00000027503) #9	MRPL45 (ENSCPOG00000001574) #10	NPEPPS (ENSCPOG00000006559) #11	KPNB1 (ENSCPOG00000006566) #12	TBKBP1 (ENSCPOG00000036345) #13	TBX21 (ENSCPOG00000026273) #14	OSBPL7 (ENSCPOG00000006914) #15	MRPL10 (ENSCPOG00000037104) #16	LRRC46 (ENSCPOG00000006925) #17	SCRN2 (ENSCPOG00000006929) #18	SP6 (ENSCPOG00000007638) #19	SP2 (ENSCPOG00000014943) #20	PNPO (ENSCPOG00000003187) #21	PRR15L (ENSCPOG00000035567)	CDK5RAP3 (ENSCPOG00000007275) #22	COPZ2 (ENSCPOG00000019500) #23	NFE2L1 (ENSCPOG00000030805) #24	CBX1 (ENSCPOG00000034435) #25	SNX11 (ENSCPOG00000020234) #26	SKAP1 (ENSCPOG00000022118) #28	HOXB1 (ENSCPOG00000022183) #29	HOXB2 (ENSCPOG00000035468) #30	ENSCPOG00000010107	ENSCPOG00000010105	HOXB5 (ENSCPOG00000030746) #33	HOXB6 (ENSCPOG00000040707) #34	HOXB9 (ENSCPOG00000037597) #37	HOXB13 (ENSCPOG00000013509)	TTLL6 (ENSCPOG00000012509)	CALCOCO2 (ENSCPOG00000021273)
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Degu	DUPLICATION
Degu	MODERN SPECIES	97	ARHGAP23 (ENSODEG00000017612) #7	GPR179 (ENSODEG00000017327) #9	MRPL45 (ENSODEG00000017631) #10	SOCS7 (ENSODEG00000017559) #8	NPEPPS (ENSODEG00000017337) #11	KPNB1 (ENSODEG00000017287) #12	ENSODEG00000017455 #13	TBX21 (ENSODEG00000017610) #14	OSBPL7 (ENSODEG00000017364) #15	MRPL10 (ENSODEG00000017536) #16	LRRC46 (ENSODEG00000017367) #17	SCRN2 (ENSODEG00000017395) #18	SP6 (ENSODEG00000017625) #19	SP2 (ENSODEG00000017126) #20	PNPO (ENSODEG00000017424) #21	ENSODEG00000017229 #22	COPZ2 (ENSODEG00000017565) #23	ENSODEG00000020421	NFE2L1 (ENSODEG00000017348) #24	CBX1 (ENSODEG00000017272) #25	SNX11 (ENSODEG00000017458) #26	SKAP1 (ENSODEG00000017533) #28	HOXB1 (ENSODEG00000017050) #29	HOXB2 (ENSODEG00000017153) #30	HOXB3 (ENSODEG00000017116)	HOXB4 (ENSODEG00000017038) #32	HOXB5 (ENSODEG00000017253) #33	HOXB6 (ENSODEG00000016988) #34	HOXB8 (ENSODEG00000017119) #36	HOXB9 (ENSODEG00000017293) #37	HOXB13 (ENSODEG00000017199)
Degu	MODERN SPECIES	199				GRXCR1 (ENSODEG00000002720)	ATP8A1 (ENSODEG00000002386)	SHISA3 (ENSODEG00000002237)	ENSODEG00000018813	BEND4 (ENSODEG00000002205)	SLC30A9 (ENSODEG00000003084)	ENSODEG00000018861	TMEM33 (ENSODEG00000003005)	ENSODEG00000002986	PHOX2B (ENSODEG00000002961)	ENSODEG00000002940	ENSODEG00000018864	ENSODEG00000002924 #22	UCHL1 (ENSODEG00000002591)	ENSODEG00000002557	ENSODEG00000002540	ENSODEG00000002526	NSUN7 (ENSODEG00000002345)	RBM47 (ENSODEG00000004873)	CHRNA9 (ENSODEG00000004847)	RHOH (ENSODEG00000019284)	ENSODEG00000004833	ENSODEG00000004818	N4BP2 (ENSODEG00000004780)	ENSODEG00000019119	PDS5A (ENSODEG00000003973)	UBE2K (ENSODEG00000003840)	ENSODEG00000003741
Long-tailed chinchilla	MODERN SPECIES	158	SOCS7 (ENSCLAG00000015232) #8	GPR179 (ENSCLAG00000014803) #9	MRPL45 (ENSCLAG00000015324) #10	NPEPPS (ENSCLAG00000016661) #11	KPNB1 (ENSCLAG00000017091) #12	ENSCLAG00000015338 #13	TBX21 (ENSCLAG00000015235) #14	OSBPL7 (ENSCLAG00000014839) #15	MRPL10 (ENSCLAG00000015400) #16	SCRN2 (ENSCLAG00000013965) #18	LRRC46 (ENSCLAG00000016713) #17	SP6 (ENSCLAG00000016276) #19	SP2 (ENSCLAG00000014115) #20	PNPO (ENSCLAG00000013871) #21	PRR15L (ENSCLAG00000017903)	CDK5RAP3 (ENSCLAG00000012292) #22	COPZ2 (ENSCLAG00000013544) #23	NFE2L1 (ENSCLAG00000014836) #24	CBX1 (ENSCLAG00000013587) #25	SNX11 (ENSCLAG00000015837) #26	SKAP1 (ENSCLAG00000015423) #28	HOXB1 (ENSCLAG00000013047) #29	HOXB2 (ENSCLAG00000015271) #30	HOXB3 (ENSCLAG00000015322)	HOXB4 (ENSCLAG00000014725) #32	HOXB5 (ENSCLAG00000014374) #33	HOXB6 (ENSCLAG00000015524) #34	HOXB7 (ENSCLAG00000014906) #35	ENSCLAG00000015198 #37	HOXB13 (ENSCLAG00000014855)	TTLL6 (ENSCLAG00000013529)
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000041148 #9	ENSHGLG00000050482	ENSHGLG00000010863 #10	ENSHGLG00000012466 #11	KPNB1 (ENSHGLG00000014138) #12	TBKBP1 (ENSHGLG00000049817) #13	TBX21 (ENSHGLG00000012216) #14	OSBPL7 (ENSHGLG00000012525) #15	MRPL10 (ENSHGLG00000048399) #16	LRRC46 (ENSHGLG00000035931) #17	SCRN2 (ENSHGLG00000041375) #18	SP6 (ENSHGLG00000021113) #19	SP2 (ENSHGLG00000009902) #20	PNPO (ENSHGLG00000013159) #21	PRR15L (ENSHGLG00000014696)	CDK5RAP3 (ENSHGLG00000019464) #22	COPZ2 (ENSHGLG00000018543) #23	NFE2L1 (ENSHGLG00000012592) #24	CBX1 (ENSHGLG00000013574) #25	SNX11 (ENSHGLG00000016837) #26	SKAP1 (ENSHGLG00000014563) #28	HOXB1 (ENSHGLG00000009781) #29	HOXB2 (ENSHGLG00000010090) #30	HOXB3 (ENSHGLG00000010686)	HOXB4 (ENSHGLG00000034075) #32	HOXB5 (ENSHGLG00000039265) #33	HOXB6 (ENSHGLG00000012400) #34	HOXB7 (ENSHGLG00000045318) #35	HOXB8 (ENSHGLG00000038380) #36	HOXB9 (ENSHGLG00000014731) #37	ENSHGLG00000048296
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Kangaroo rat	MODERN SPECIES	89																ENSDORG00000025270 #22
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Muroidea	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000154152.d.a.a ##25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Prairie vole	MODERN SPECIES	114	Socs7 (ENSMOCG00000015144) #8	ENSMOCG00000022822 #9	Mrpl45 (ENSMOCG00000002139) #10	Npepps (ENSMOCG00000011600) #11	Kpnb1 (ENSMOCG00000003683) #12	Tbkbp1 (ENSMOCG00000017020) #13	Tbx21 (ENSMOCG00000004097) #14	Osbpl7 (ENSMOCG00000021054) #15	Mrpl10 (ENSMOCG00000019451) #16	Lrrc46 (ENSMOCG00000016707) #17	Scrn2 (ENSMOCG00000019511) #18	Sp6 (ENSMOCG00000007065) #19	Sp2 (ENSMOCG00000020935) #20	Pnpo (ENSMOCG00000011655) #21	Prr15l (ENSMOCG00000006695)	Cdk5rap3 (ENSMOCG00000019534) #22	Copz2 (ENSMOCG00000022427) #23	Nfe2l1 (ENSMOCG00000016002) #24	Cbx1 (ENSMOCG00000001520) #25	Snx11 (ENSMOCG00000019303) #26	Skap1 (ENSMOCG00000018431) #28	Hoxb1 (ENSMOCG00000002452) #29	Hoxb2 (ENSMOCG00000014846) #30	Hoxb3 (ENSMOCG00000020739)	Hoxb4 (ENSMOCG00000022964) #32	Hoxb5 (ENSMOCG00000014523) #33	Hoxb6 (ENSMOCG00000020355) #34	Hoxb7 (ENSMOCG00000020820) #35	Hoxb8 (ENSMOCG00000018435) #36	Hoxb9 (ENSMOCG00000020312) #37	Hoxb13 (ENSMOCG00000021389)
Northern American deer mouse	MODERN SPECIES	21	ENSPEMG00000027307 #9	Mrpl45 (ENSPEMG00000005654) #10	Npepps (ENSPEMG00000012220) #11	Kpnb1 (ENSPEMG00000017783) #12	Tbkbp1 (ENSPEMG00000027762) #13	Tbx21 (ENSPEMG00000010056) #14	Osbpl7 (ENSPEMG00000001423) #15	Mrpl10 (ENSPEMG00000014613) #16	Lrrc46 (ENSPEMG00000020507) #17	Scrn2 (ENSPEMG00000020381) #18	Sp6 (ENSPEMG00000001231) #19	Sp2 (ENSPEMG00000017112) #20	Pnpo (ENSPEMG00000025094) #21	Prr15l (ENSPEMG00000024436)	ENSPEMG00000030963	Cdk5rap3 (ENSPEMG00000020712) #22	Copz2 (ENSPEMG00000011137) #23	Nfe2l1 (ENSPEMG00000010512) #24	Cbx1 (ENSPEMG00000020976) ##25	Snx11 (ENSPEMG00000000381) #26	ENSPEMG00000020286	Skap1 (ENSPEMG00000000585) #28	Hoxb1 (ENSPEMG00000023977) #29	Hoxb2 (ENSPEMG00000029510) #30	Hoxb3 (ENSPEMG00000028692)	Hoxb4 (ENSPEMG00000029805) #32	Hoxb5 (ENSPEMG00000030101) #33	Hoxb9 (ENSPEMG00000027158) #37	Hoxb13 (ENSPEMG00000021511)	Ttll6 (ENSPEMG00000021918)	ENSPEMG00000025676
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.a.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Chinese hamster chok1gshd	MODERN SPECIES	33	Socs7 (ENSCGRG00001021949) #8	Gpr179 (ENSCGRG00001014708) #9	Mrpl45 (ENSCGRG00001000066) #10	Npepps (ENSCGRG00001005930) #11	Kpnb1 (ENSCGRG00001016042) #12	Tbkbp1 (ENSCGRG00001018526) #13	Tbx21 (ENSCGRG00001008276) #14	Osbpl7 (ENSCGRG00001013737) #15	Mrpl10 (ENSCGRG00001024199) #16	Lrrc46 (ENSCGRG00001019758) #17	Scrn2 (ENSCGRG00001022143) #18	Sp6 (ENSCGRG00001002797) #19	Sp2 (ENSCGRG00001010976) #20	Pnpo (ENSCGRG00001018189) #21	Prr15l (ENSCGRG00001008926)	Cdk5rap3 (ENSCGRG00001006966) #22	Copz2 (ENSCGRG00001014767) #23	Nfe2l1 (ENSCGRG00001015287) #24	Cbx1 (ENSCGRG00001014799) ##25	Snx11 (ENSCGRG00001022221) #26	ENSCGRG00001020759 #28	ENSCGRG00001023355 #28	Hoxb1 (ENSCGRG00001024619) #29	Hoxb2 (ENSCGRG00001017587) #30	Hoxb3 (ENSCGRG00001016667)	Hoxb4 (ENSCGRG00001022431) #32	Hoxb5 (ENSCGRG00001016167) #33	Hoxb6 (ENSCGRG00001015674) #34	Hoxb7 (ENSCGRG00001021590) #35	Hoxb8 (ENSCGRG00001020235) #36	Hoxb9 (ENSCGRG00001015314) #37
Golden Hamster	MODERN SPECIES	674	Arhgap23 (ENSMAUG00000018856) #7	Socs7 (ENSMAUG00000015461) #8	ENSMAUG00000015632 #9	Mrpl45 (ENSMAUG00000021636) #10	Npepps (ENSMAUG00000017383) #11	Kpnb1 (ENSMAUG00000006211) #12	Tbkbp1 (ENSMAUG00000018604) #13	Tbx21 (ENSMAUG00000017507) #14	Osbpl7 (ENSMAUG00000013876) #15	Mrpl10 (ENSMAUG00000000820) #16	Lrrc46 (ENSMAUG00000019416) #17	Scrn2 (ENSMAUG00000010014) #18	Sp6 (ENSMAUG00000009667) #19	Sp2 (ENSMAUG00000019269) #20	Pnpo (ENSMAUG00000021706) #21	Cdk5rap3 (ENSMAUG00000007991) #22	Copz2 (ENSMAUG00000010560) #23	Nfe2l1 (ENSMAUG00000020456) #24	ENSMAUG00000003463 #25	Snx11 (ENSMAUG00000021528) #26	Skap1 (ENSMAUG00000022191) #28	Hoxb1 (ENSMAUG00000013237) #29	Hoxb2 (ENSMAUG00000021979) #30	Hoxb3 (ENSMAUG00000011251)	Hoxb4 (ENSMAUG00000009367) #32	Hoxb5 (ENSMAUG00000021419) #33	Hoxb6 (ENSMAUG00000021423) #34	Hoxb7 (ENSMAUG00000021297) #35	Hoxb8 (ENSMAUG00000012636) #36	Hoxb9 (ENSMAUG00000017720) #37	Hoxb13 (ENSMAUG00000008407)
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37	ENSGT00940000159029
Mus	ANCESTRAL SPECIES	2	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Mouse	MODERN SPECIES	2	Socs7 (ENSMUSG00000038485) #8	Gpr179 (ENSMUSG00000070337) #9	Mrpl45 (ENSMUSG00000018882) #10	Npepps (ENSMUSG00000001441) #11	Kpnb1 (ENSMUSG00000001440) #12	Tbkbp1 (ENSMUSG00000038517) #13	Tbx21 (ENSMUSG00000001444) #14	Osbpl7 (ENSMUSG00000038534) #15	Mrpl10 (ENSMUSG00000001445) #16	Lrrc46 (ENSMUSG00000020878) #17	Scrn2 (ENSMUSG00000020877) #18	Sp6 (ENSMUSG00000038560) #19	Sp2 (ENSMUSG00000018678) #20	Pnpo (ENSMUSG00000018659) #21	Prr15l (ENSMUSG00000047040)	Cdk5rap3 (ENSMUSG00000018669) #22	Copz2 (ENSMUSG00000018672) #23	Nfe2l1 (ENSMUSG00000038615) #24	Cbx1 (ENSMUSG00000018666) #25	Snx11 (ENSMUSG00000020876) #26	Skap1 (ENSMUSG00000057058) #28	Hoxb1 (ENSMUSG00000018973) #29	Hoxb2 (ENSMUSG00000075588) #30	Hoxb3 (ENSMUSG00000048763)	Hoxb4 (ENSMUSG00000038692) #32	Hoxb5 (ENSMUSG00000038700) #33	Hoxb6 (ENSMUSG00000000690) #34	Hoxb7 (ENSMUSG00000038721) #35	Hoxb8 (ENSMUSG00000056648) #36	Hoxb9 (ENSMUSG00000020875) #37	Hoxb13 (ENSMUSG00000049604)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000156314 #8	ENSGT00940000160776 #9	ENSGT00390000012679 #10	ENSGT00940000155246 #11	ENSGT00550000074898 #12	ENSGT00940000153704.B #13	ENSGT00940000160397 #14	ENSGT00940000157439 #15	ENSGT00390000000603 #16	ENSGT00940000161315 #17	ENSGT00390000013474.b.a #18	ENSGT00940000161498 #19	ENSGT00940000159590 #20	ENSGT00390000011219 #21	ENSGT00940000154534.a	ENSGT00390000000713 #22	ENSGT00390000004405.b #23	ENSGT00950000182892.a.b.a.a #24	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #25	ENSGT00940000160113 #26	ENSGT00390000017856.b #28	ENSGT00940000159503 #29	ENSGT00940000155029.c.b #30	ENSGT00940000159774	ENSGT00940000162072 #32	ENSGT00940000158354 #33	ENSGT00940000161108 #34	ENSGT00940000161230 #35	ENSGT00940000161529 #36	ENSGT00940000161386 #37
Steppe mouse	MODERN SPECIES	3291	Socs7 (ENSMSIG00000017810) #8	Gpr179 (ENSMSIG00000017852) #9	Mrpl45 (ENSMSIG00000017873) #10	Npepps (ENSMSIG00000017886) #11	Kpnb1 (ENSMSIG00000017971) #12	Tbkbp1 (ENSMSIG00000018040) #13	Tbx21 (ENSMSIG00000018069) #14	Osbpl7 (ENSMSIG00000018093) #15	Mrpl10 (ENSMSIG00000018160) #16	Lrrc46 (ENSMSIG00000018171) #17	Scrn2 (ENSMSIG00000018202) #18	Sp6 (ENSMSIG00000018223) #19	Sp2 (ENSMSIG00000018237) #20	ENSMSIG00000018267 #21	ENSMSIG00000018270	Cdk5rap3 (ENSMSIG00000018309) #22	Copz2 (ENSMSIG00000018337) #23	Nfe2l1 (ENSMSIG00000018374) #24	Cbx1 (ENSMSIG00000018447) #25	ENSMSIG00000018520	Snx11 (ENSMSIG00000018546) #26	Skap1 (ENSMSIG00000018601) #28	Hoxb1 (ENSMSIG00000018752) #29	Hoxb2 (ENSMSIG00000018769) #30	Hoxb3 (ENSMSIG00000018771)	ENSMSIG00000018776	Hoxb4 (ENSMSIG00000018777) #32	Hoxb5 (ENSMSIG00000018787) #33	Hoxb6 (ENSMSIG00000018795) #34	Hoxb7 (ENSMSIG00000018805) #35	Hoxb8 (ENSMSIG00000018807) #36
spretus	MODERN SPECIES	2	Socs7 (MGP_SPRETEiJ_G0017900) #8	Gpr179 (MGP_SPRETEiJ_G0017899) #9	Mrpl45 (MGP_SPRETEiJ_G0017898) #10	Npepps (MGP_SPRETEiJ_G0017897) #11	Kpnb1 (MGP_SPRETEiJ_G0017896) #12	Tbkbp1 (MGP_SPRETEiJ_G0017895) #13	Tbx21 (MGP_SPRETEiJ_G0017894) #14	Osbpl7 (MGP_SPRETEiJ_G0017893) #15	Mrpl10 (MGP_SPRETEiJ_G0017892) #16	Lrrc46 (MGP_SPRETEiJ_G0017891) #17	Scrn2 (MGP_SPRETEiJ_G0017890) #18	Sp6 (MGP_SPRETEiJ_G0017889) #19	Sp2 (MGP_SPRETEiJ_G0017888) #20	Pnpo (MGP_SPRETEiJ_G0017887) #21	Prr15l (MGP_SPRETEiJ_G0017886)	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #22	Copz2 (MGP_SPRETEiJ_G0017884) #23	Nfe2l1 (MGP_SPRETEiJ_G0017883) #24	MGP_SPRETEiJ_G0017882	Cbx1 (MGP_SPRETEiJ_G0017881) #25	Snx11 (MGP_SPRETEiJ_G0017880) #26	MGP_SPRETEiJ_G0017879 #28	Hoxb1 (MGP_SPRETEiJ_G0017878) #29	Hoxb2 (MGP_SPRETEiJ_G0017877) #30	Hoxb3 (MGP_SPRETEiJ_G0017876)	Hoxb4 (MGP_SPRETEiJ_G0017875) #32	Hoxb5 (MGP_SPRETEiJ_G0017874) #33	Hoxb6 (MGP_SPRETEiJ_G0017873) #34	Hoxb7 (MGP_SPRETEiJ_G0017872) #35	Hoxb8 (MGP_SPRETEiJ_G0017871) #36	Hoxb9 (MGP_SPRETEiJ_G0017870) #37
Ryukyu mouse	MODERN SPECIES	2	Socs7 (MGP_CAROLIEiJ_G0017054) #8	Gpr179 (MGP_CAROLIEiJ_G0017053) #9	Mrpl45 (MGP_CAROLIEiJ_G0017052) #10	Npepps (MGP_CAROLIEiJ_G0017051) #11	Kpnb1 (MGP_CAROLIEiJ_G0017050) #12	Tbkbp1 (MGP_CAROLIEiJ_G0017049) #13	Tbx21 (MGP_CAROLIEiJ_G0017048) #14	Osbpl7 (MGP_CAROLIEiJ_G0017047) #15	Mrpl10 (MGP_CAROLIEiJ_G0017046) #16	Lrrc46 (MGP_CAROLIEiJ_G0017045) #17	MGP_CAROLIEiJ_G0017044 #18	Sp6 (MGP_CAROLIEiJ_G0017043) #19	Sp2 (MGP_CAROLIEiJ_G0017042) #20	Pnpo (MGP_CAROLIEiJ_G0017041) #21	Prr15l (MGP_CAROLIEiJ_G0017040)	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #22	Copz2 (MGP_CAROLIEiJ_G0017038) #23	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #24	MGP_CAROLIEiJ_G0017036	Cbx1 (MGP_CAROLIEiJ_G0017035) #25	Snx11 (MGP_CAROLIEiJ_G0017034) #26	Skap1 (MGP_CAROLIEiJ_G0017033) #28	Hoxb1 (MGP_CAROLIEiJ_G0017032) #29	Hoxb2 (MGP_CAROLIEiJ_G0017031) #30	Hoxb3 (MGP_CAROLIEiJ_G0017030)	Hoxb4 (MGP_CAROLIEiJ_G0017029) #32	Hoxb5 (MGP_CAROLIEiJ_G0017028) #33	Hoxb6 (MGP_CAROLIEiJ_G0017027) #34	Hoxb7 (MGP_CAROLIEiJ_G0017026) #35	Hoxb8 (MGP_CAROLIEiJ_G0017025) #36	Hoxb9 (MGP_CAROLIEiJ_G0017024) #37
Shrew mouse	MODERN SPECIES	5	Arhgap23 (MGP_PahariEiJ_G0018184) #7	Socs7 (MGP_PahariEiJ_G0018183) #8	Gpr179 (MGP_PahariEiJ_G0018182) #9	MGP_PahariEiJ_G0018181 #10	Npepps (MGP_PahariEiJ_G0018180) #11	Tbkbp1 (MGP_PahariEiJ_G0018179) #13	Tbx21 (MGP_PahariEiJ_G0018178) #14	Osbpl7 (MGP_PahariEiJ_G0018177) #15	Mrpl10 (MGP_PahariEiJ_G0018176) #16	Lrrc46 (MGP_PahariEiJ_G0018175) #17	Scrn2 (MGP_PahariEiJ_G0018174) #18	Sp6 (MGP_PahariEiJ_G0018173) #19	Sp2 (MGP_PahariEiJ_G0018172) #20	Pnpo (MGP_PahariEiJ_G0018171) #21	Prr15l (MGP_PahariEiJ_G0018170)	Cdk5rap3 (MGP_PahariEiJ_G0018169) #22	Copz2 (MGP_PahariEiJ_G0018168) #23	Nfe2l1 (MGP_PahariEiJ_G0018167) #24	MGP_PahariEiJ_G0018166	Cbx1 (MGP_PahariEiJ_G0018165) #25	Snx11 (MGP_PahariEiJ_G0018164) #26	Skap1 (MGP_PahariEiJ_G0018163) #28	Hoxb1 (MGP_PahariEiJ_G0018162) #29	Hoxb2 (MGP_PahariEiJ_G0018161) #30	Hoxb3 (MGP_PahariEiJ_G0018160)	Hoxb4 (MGP_PahariEiJ_G0018159) #32	Hoxb5 (MGP_PahariEiJ_G0018158) #33	Hoxb6 (MGP_PahariEiJ_G0018157) #34	Hoxb7 (MGP_PahariEiJ_G0018156) #35	Hoxb8 (MGP_PahariEiJ_G0018155) #36	Hoxb9 (MGP_PahariEiJ_G0018154) #37
Rat	MODERN SPECIES	1	Gpr179 (ENSRNOG00000029245) #9	Mrpl45 (ENSRNOG00000010540) #10	Npepps (ENSRNOG00000023095) #11	AABR07030425.1 (ENSRNOG00000056057)	Kpnb1 (ENSRNOG00000009275) #12	Tbkbp1 (ENSRNOG00000009370) #13	Tbx21 (ENSRNOG00000009427) #14	Osbpl7 (ENSRNOG00000009473) #15	Mrpl10 (ENSRNOG00000009567) #16	Lrrc46 (ENSRNOG00000009902) #17	Scrn2 (ENSRNOG00000010214) #18	Sp6 (ENSRNOG00000023551) #19	Sp2 (ENSRNOG00000010492) #20	Pnpo (ENSRNOG00000046493) #21	Prr15l (ENSRNOG00000049162)	Cdk5rap3 (ENSRNOG00000048747) #22	Copz2 (ENSRNOG00000009225) #23	Nfe2l1 (ENSRNOG00000008830) #24	Cbx1 (ENSRNOG00000008689) #25	Snx11 (ENSRNOG00000008642) #26	Skap1 (ENSRNOG00000023881) #28	Hoxb1 (ENSRNOG00000008506) #29	Hoxb2 (ENSRNOG00000008365) #30	Hoxb3 (ENSRNOG00000008313)	Hoxb4 (ENSRNOG00000008191) #32	Hoxb5 (ENSRNOG00000008010) #33	Hoxb6 (ENSRNOG00000007823) #34	Hoxb7 (ENSRNOG00000007611) #35	Hoxb8 (ENSRNOG00000007585) #36	Hoxb9 (ENSRNOG00000007573) #37	Hoxb13 (ENSRNOG00000007491)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Map3k14 (ENSNGAG00000018057)	Arhgap27 (ENSNGAG00000021239)	Plekhm1 (ENSNGAG00000013194)	Kpnb1 (ENSNGAG00000017610) #12	Tbkbp1 (ENSNGAG00000021163) #13	Tbx21 (ENSNGAG00000002476) #14	Osbpl7 (ENSNGAG00000019382) #15	Mrpl10 (ENSNGAG00000022195) #16	Lrrc46 (ENSNGAG00000022557) #17	Scrn2 (ENSNGAG00000023806) #18	Sp6 (ENSNGAG00000015868) #19	Sp2 (ENSNGAG00000017612) #20	Pnpo (ENSNGAG00000020016) #21	Prr15l (ENSNGAG00000021432)	ENSNGAG00000022529	ENSNGAG00000000747 #22	Copz2 (ENSNGAG00000023713) #23	Nfe2l1 (ENSNGAG00000000736) #24	Cbx1 (ENSNGAG00000006760) #25	Snx11 (ENSNGAG00000010446) #26	Skap1 (ENSNGAG00000012571) #28	Hoxb1 (ENSNGAG00000018593) #29	Hoxb2 (ENSNGAG00000019089) #30	Hoxb3 (ENSNGAG00000020227)	Hoxb4 (ENSNGAG00000021768) #32	Hoxb5 (ENSNGAG00000023238) #33	Hoxb6 (ENSNGAG00000000973) #34	Hoxb7 (ENSNGAG00000010205) #35	Hoxb8 (ENSNGAG00000010647) #36	Hoxb9 (ENSNGAG00000010851) #37	Hoxb13 (ENSNGAG00000011053)
Lesser Egyptian jerboa	MODERN SPECIES	56	Socs7 (ENSJJAG00000007563) #8	ENSJJAG00000002004 #9	ENSJJAG00000009505	Npepps (ENSJJAG00000005423) #11	Kpnb1 (ENSJJAG00000010909) #12	ENSJJAG00000010141 #13	Tbx21 (ENSJJAG00000000813) #14	Osbpl7 (ENSJJAG00000004477) #15	Mrpl10 (ENSJJAG00000004046) #16	Lrrc46 (ENSJJAG00000010412) #17	Scrn2 (ENSJJAG00000023635) #18	Sp6 (ENSJJAG00000006452) #19	Sp2 (ENSJJAG00000003061) #20	Pnpo (ENSJJAG00000023608) #21	Prr15l (ENSJJAG00000006478)	ENSJJAG00000002511 #22	Copz2 (ENSJJAG00000001025) #23	Nfe2l1 (ENSJJAG00000006432) #24	ENSJJAG00000007753 #25	ENSJJAG00000005754 #26	Skap1 (ENSJJAG00000003458) #28	Hoxb1 (ENSJJAG00000001073) #29	Hoxb2 (ENSJJAG00000009465) #30	Hoxb3 (ENSJJAG00000007804)	Hoxb4 (ENSJJAG00000002642) #32	Hoxb5 (ENSJJAG00000000763) #33	Hoxb6 (ENSJJAG00000000997) #34	Hoxb7 (ENSJJAG00000001284) #35	Hoxb8 (ENSJJAG00000002398) #36	Hoxb9 (ENSJJAG00000009821) #37	Hoxb13 (ENSJJAG00000010401)