Glires	ANCESTRAL SPECIES	15	ENSGT00940000158844	ENSGT00390000006043	ENSGT00940000162591	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000158844	ENSGT00390000006043	ENSGT00940000162591	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000158844	ENSGT00390000006043	ENSGT00940000162591	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000158844	ENSGT00390000006043	ENSGT00940000162591	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Marmotini	ANCESTRAL SPECIES	9	ENSGT00940000158844	ENSGT00390000006043	ENSGT00940000162591	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00940000158844	ENSGT00390000006043	ENSGT00940000162591	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Arctic ground squirrel	MODERN SPECIES	397						ITGA11 (ENSUPAG00010017705) #12	FEM1B (ENSUPAG00010017736) #13	CLN6 (ENSUPAG00010017740) #14	CALML4 (ENSUPAG00010017747) #15	PIAS1 (ENSUPAG00010017772) #16	ENSUPAG00010017781 #17	SKOR1 (ENSUPAG00010017792) #18	MAP2K5 (ENSUPAG00010017819) #19	C15orf61 (ENSUPAG00010017904) #20	IQCH (ENSUPAG00010017914) #21	AAGAB (ENSUPAG00010018001) #22	SMAD3 (ENSUPAG00010018010) #23	ENSUPAG00010018048 #24	SMAD6 (ENSUPAG00010018050) #25	LCTL (ENSUPAG00010018063) #26	ZWILCH (ENSUPAG00010018079) #27	RPL4 (ENSUPAG00010018119) #28	SNAPC5 (ENSUPAG00010018142) #29	MAP2K1 (ENSUPAG00010018149) #30
Squirrel	MODERN SPECIES	71	RPLP1 (ENSSTOG00000027893)	KIF23 (ENSSTOG00000022809)	PAQR5 (ENSSTOG00000000507)	GLCE (ENSSTOG00000019509)	ENSSTOG00000015929	CORO2B (ENSSTOG00000015918)	ITGA11 (ENSSTOG00000015545) #12	FEM1B (ENSSTOG00000015544) #13	CLN6 (ENSSTOG00000015540) #14	CALML4 (ENSSTOG00000015539) #15	PIAS1 (ENSSTOG00000015532) #16	SKOR1 (ENSSTOG00000002675) #18	MAP2K5 (ENSSTOG00000010318) #19	C15orf61 (ENSSTOG00000010312) #20	IQCH (ENSSTOG00000010299) #21	AAGAB (ENSSTOG00000010291) #22	SMAD3 (ENSSTOG00000010286) #23	SMAD6 (ENSSTOG00000000696) #25	LCTL (ENSSTOG00000028073) #26	ZWILCH (ENSSTOG00000009607) #27	RPL4 (ENSSTOG00000009221) #28	SNAPC5 (ENSSTOG00000009201) #29	MAP2K1 (ENSSTOG00000009190) #30	TIPIN (ENSSTOG00000009182)	DIS3L (ENSSTOG00000009158)	MEGF11 (ENSSTOG00000015258)	RAB11A (ENSSTOG00000015255)	DENND4A (ENSSTOG00000026966)	SLC24A1 (ENSSTOG00000002228)	INTS14 (ENSSTOG00000002217)	HACD3 (ENSSTOG00000002211)
Alpin marmot	MODERN SPECIES	7	PAQR5 (ENSMMMG00000005396)	GLCE (ENSMMMG00000005432)	NOX5 (ENSMMMG00000005478)	SPESP1 (ENSMMMG00000005545)	ENSMMMG00000005555	CORO2B (ENSMMMG00000005600)	ITGA11 (ENSMMMG00000005622) #12	ENSMMMG00000005671 #13	CLN6 (ENSMMMG00000005687) #14	CALML4 (ENSMMMG00000005699) #15	PIAS1 (ENSMMMG00000005733) #16	SKOR1 (ENSMMMG00000005773) #18	MAP2K5 (ENSMMMG00000005809) #19	ENSMMMG00000005844	IQCH (ENSMMMG00000005869) #21	AAGAB (ENSMMMG00000005970) #22	SMAD3 (ENSMMMG00000005977) #23	ENSMMMG00000006027 #24	SMAD6 (ENSMMMG00000006032) #25	LCTL (ENSMMMG00000006061) #26	ZWILCH (ENSMMMG00000006077) #27	ENSMMMG00000006104	RPL4 (ENSMMMG00000006109) #28	SNAPC5 (ENSMMMG00000006163) #29	MAP2K1 (ENSMMMG00000006173) #30	TIPIN (ENSMMMG00000006196)	DIS3L (ENSMMMG00000006220)	MEGF11 (ENSMMMG00000006311)	RAB11A (ENSMMMG00000006747)	ENSMMMG00000006762	DENND4A (ENSMMMG00000006769)
Eurasian red squirrel	MODERN SPECIES	11	GLCE (ENSSVLG00005007694)	NOX5 (ENSSVLG00005007597)	SPESP1 (ENSSVLG00005007565)	ENSSVLG00005007513	ENSSVLG00005007452	CORO2B (ENSSVLG00005007364)	ITGA11 (ENSSVLG00005007326) #12	FEM1B (ENSSVLG00005007302) #13	CLN6 (ENSSVLG00005007215) #14	CALML4 (ENSSVLG00005007109) #15	PIAS1 (ENSSVLG00005007019) #16	SKOR1 (ENSSVLG00005006917) #18	MAP2K5 (ENSSVLG00005006656) #19	C15orf61 (ENSSVLG00005006592) #20	IQCH (ENSSVLG00005025085) #21	AAGAB (ENSSVLG00005025018) #22	SMAD3 (ENSSVLG00005024991) #23	ENSSVLG00005024968 #24	SMAD6 (ENSSVLG00005024946) #25	LCTL (ENSSVLG00005024912) #26	ZWILCH (ENSSVLG00005024833) #27	ENSSVLG00005024744 #28	SNAPC5 (ENSSVLG00005024729) #29	MAP2K1 (ENSSVLG00005024707) #30	TIPIN (ENSSVLG00005024668)	DIS3L (ENSSVLG00005024622)	MEGF11 (ENSSVLG00005024351)	RAB11A (ENSSVLG00005024246)	DENND4A (ENSSVLG00005024160)	SLC24A1 (ENSSVLG00005023979)	INTS14 (ENSSVLG00005023820)
Hystricomorpha	ANCESTRAL SPECIES	36	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145.vb #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Hystricomorpha_a	ANCESTRAL SPECIES	38	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145.vb #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	35	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145.vb #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Degu	DUPLICATION
Degu	MODERN SPECIES	67	GLCE (ENSODEG00000015883)	ENSODEG00000016071	CORO2B (ENSODEG00000016099)	ITGA11 (ENSODEG00000015700) #12	ENSODEG00000020366	ENSODEG00000016475 #13	CLN6 (ENSODEG00000015888) #14	CALML4 (ENSODEG00000015441) #15	PIAS1 (ENSODEG00000016418) #16	SKOR1 (ENSODEG00000015903) #18	MAP2K5 (ENSODEG00000015607) #19	ENSODEG00000016511	C15orf61 (ENSODEG00000016721) #20	IQCH (ENSODEG00000016134) #21	ENSODEG00000020336	ENSODEG00000015886 #22	SMAD3 (ENSODEG00000015739) #23	SMAD6 (ENSODEG00000016272) #25	ENSODEG00000020317	LCTL (ENSODEG00000016271) #26	ZWILCH (ENSODEG00000016374) #27	ENSODEG00000016495 #28	MAP2K1 (ENSODEG00000016739) #30	DIS3L (ENSODEG00000015811)	MEGF11 (ENSODEG00000015967)	ENSODEG00000016878	ENSODEG00000016435	ENSODEG00000016544	SLC24A1 (ENSODEG00000016047)	INTS14 (ENSODEG00000017006)	HACD3 (ENSODEG00000016975)
Degu	MODERN SPECIES	122														ENSODEG00000006114	ZPLD1 (ENSODEG00000007525)	ENSODEG00000007067 #22	ENSODEG00000005667	NFKBIZ (ENSODEG00000005703)	ENSODEG00000005326	ENSODEG00000007096	NXPE3 (ENSODEG00000006809)	ENSODEG00000006503	ENSODEG00000005842	ZBTB11 (ENSODEG00000006262)	ENSODEG00000019290	ENSODEG00000005207	SENP7 (ENSODEG00000006738)	ENSODEG00000005550	IMPG2 (ENSODEG00000006079)	ABI3BP (ENSODEG00000005855)	ENSODEG00000005535
Long-tailed chinchilla	MODERN SPECIES	157	KIF23 (ENSCLAG00000009415)	PAQR5 (ENSCLAG00000008730)	GLCE (ENSCLAG00000009057)	SPESP1 (ENSCLAG00000009992)	ENSCLAG00000010256	CORO2B (ENSCLAG00000006658)	ITGA11 (ENSCLAG00000006568) #12	FEM1B (ENSCLAG00000004834) #13	CLN6 (ENSCLAG00000007035) #14	CALML4 (ENSCLAG00000008707) #15	PIAS1 (ENSCLAG00000008129) #16	SKOR1 (ENSCLAG00000007488) #18	MAP2K5 (ENSCLAG00000005277) #19	C15orf61 (ENSCLAG00000008894) #20	IQCH (ENSCLAG00000011031) #21	AAGAB (ENSCLAG00000008364) #22	SMAD3 (ENSCLAG00000005027) #23	ENSCLAG00000005550 #25	LCTL (ENSCLAG00000004564) #26	ZWILCH (ENSCLAG00000010124) #27	RPL4 (ENSCLAG00000010827) #28	SNAPC5 (ENSCLAG00000011660) #29	MAP2K1 (ENSCLAG00000013042) #30	TIPIN (ENSCLAG00000004924)	DIS3L (ENSCLAG00000005741)	MEGF11 (ENSCLAG00000013146)	RAB11A (ENSCLAG00000007435)	DENND4A (ENSCLAG00000007003)	SLC24A1 (ENSCLAG00000013073)	INTS14 (ENSCLAG00000009395)	HACD3 (ENSCLAG00000010725)
Guinea pig	MODERN SPECIES						GLCE (ENSCPOG00000020608)	ENSCPOG00000008829	CORO2B (ENSCPOG00000023117)	ITGA11 (ENSCPOG00000012877) #12	FEM1B (ENSCPOG00000031057) #13	CLN6 (ENSCPOG00000007282) #14	CALML4 (ENSCPOG00000033517) #15	PIAS1 (ENSCPOG00000007278) #16	SKOR1 (ENSCPOG00000012665) #18	MAP2K5 (ENSCPOG00000000970) #19	C15orf61 (ENSCPOG00000022542) #20	AAGAB (ENSCPOG00000000965) #22	SMAD3 (ENSCPOG00000021314) #23	SMAD6 (ENSCPOG00000001535) #25	DST (ENSCPOG00000005092)	BEND6 (ENSCPOG00000015453)	ZNF451 (ENSCPOG00000002491)	BAG2 (ENSCPOG00000040302)	RAB23 (ENSCPOG00000030218)	ENSCPOG00000035048	PRIM2 (ENSCPOG00000003912)	KHDRBS2 (ENSCPOG00000025621)	LGSN (ENSCPOG00000008736)	PTP4A1 (ENSCPOG00000032105)	ENSCPOG00000007146	ENSCPOG00000030019	DAPK2 (ENSCPOG00000000890)
Naked mole-rat female	MODERN SPECIES	19	KIF23 (ENSHGLG00000009784)	PAQR5 (ENSHGLG00000009727)	GLCE (ENSHGLG00000033764)	SPESP1 (ENSHGLG00000046924)	ENSHGLG00000013229	CORO2B (ENSHGLG00000015273)	ITGA11 (ENSHGLG00000007233) #12	FEM1B (ENSHGLG00000017948) #13	CLN6 (ENSHGLG00000017958) #14	Calml4 (ENSHGLG00000018794) #15	Pias1 (ENSHGLG00000019002) #16	SKOR1 (ENSHGLG00000017297) #18	MAP2K5 (ENSHGLG00000006627) #19	C15orf61 (ENSHGLG00000038870) #20	ENSHGLG00000026352 #21	AAGAB (ENSHGLG00000038898) #22	SMAD3 (ENSHGLG00000048787) #23	SMAD6 (ENSHGLG00000008453) #25	LCTL (ENSHGLG00000015669) #26	ZWILCH (ENSHGLG00000016059) #27	ENSHGLG00000008054 #28	ENSHGLG00000040904 #29	ENSHGLG00000010036 #30	ENSHGLG00000048822	ENSHGLG00000005971	ENSHGLG00000007770	MEGF11 (ENSHGLG00000011012)	RAB11A (ENSHGLG00000048551)	ENSHGLG00000044288	DENND4A (ENSHGLG00000009810)	SLC24A1 (ENSHGLG00000008872)
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Kangaroo rat	MODERN SPECIES	330												Skor1 (ENSDORG00000005677) #18	Map2k5 (ENSDORG00000005673) #19	2300009A05Rik (ENSDORG00000028687) #20	Iqch (ENSDORG00000006468) #21	ENSDORG00000026611 #22	Smad3 (ENSDORG00000029949) #23	ENSDORG00000026894	Smad6 (ENSDORG00000028234) #25	Lctl (ENSDORG00000016291) #26	Zwilch (ENSDORG00000016288) #27	Rpl4 (ENSDORG00000016287) #28	Snapc5 (ENSDORG00000030051) #29	Map2k1 (ENSDORG00000001301) #30	Tipin (ENSDORG00000028988)	Dis3l (ENSDORG00000014909)	Megf11 (ENSDORG00000001008)	ENSDORG00000026125	ENSDORG00000028034	Dennd4a (ENSDORG00000002146)	Slc24a1 (ENSDORG00000007185)
Myomorpha	ANCESTRAL SPECIES	25	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Muroidea	ANCESTRAL SPECIES	23	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145.kb #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Golden Hamster	MODERN SPECIES	672	ENSMAUG00000008843	ENSMAUG00000007063	Kif23 (ENSMAUG00000009848)	Paqr5 (ENSMAUG00000009377)	Glce (ENSMAUG00000013447)	Spesp1 (ENSMAUG00000008837)	Anp32a (ENSMAUG00000000632)	Coro2b (ENSMAUG00000009618)	Itga11 (ENSMAUG00000002222) #12	Cln6 (ENSMAUG00000009546) #14	Calml4 (ENSMAUG00000015006) #15	Pias1 (ENSMAUG00000000785) #16	Skor1 (ENSMAUG00000020780) #18	Map2k5 (ENSMAUG00000015370) #19	Iqch (ENSMAUG00000004333) #21	Aagab (ENSMAUG00000005383) #22	Smad3 (ENSMAUG00000022258) #23	Smad6 (ENSMAUG00000009859) #25	Lctl (ENSMAUG00000009957) #26	Zwilch (ENSMAUG00000021210) #27	Rpl4 (ENSMAUG00000018867) #28	Snapc5 (ENSMAUG00000008645) #29	Map2k1 (ENSMAUG00000011379) #30	Tipin (ENSMAUG00000012421)	Dis3l (ENSMAUG00000008265)	Megf11 (ENSMAUG00000003129)	Rab11a (ENSMAUG00000018551)	Dennd4a (ENSMAUG00000018527)	Slc24a1 (ENSMAUG00000012813)	Ints14 (ENSMAUG00000020937)	Hacd3 (ENSMAUG00000004278)
Chinese hamster chok1gshd	MODERN SPECIES	284	Paqr5 (ENSCGRG00001021586)	Glce (ENSCGRG00001019156)	Spesp1 (ENSCGRG00001015906)	ENSCGRG00001022637	Coro2b (ENSCGRG00001025051)	Itga11 (ENSCGRG00001016586) #12	Fem1b (ENSCGRG00001018487) #13	Cln6 (ENSCGRG00001016348) #14	Calml4 (ENSCGRG00001023410) #15	Pias1 (ENSCGRG00001018818) #16	Skor1 (ENSCGRG00001000300) #18	Map2k5 (ENSCGRG00001024707) #19	2300009A05Rik (ENSCGRG00001009275) #20	ENSCGRG00001000811	Iqch (ENSCGRG00001006084) #21	Aagab (ENSCGRG00001020082) #22	Smad3 (ENSCGRG00001013999) #23	Smad6 (ENSCGRG00001002733) #25	Lctl (ENSCGRG00001017716) #26	Zwilch (ENSCGRG00001018206) #27	Snapc5 (ENSCGRG00001013968) #29	Tipin (ENSCGRG00001018146)	Dis3l (ENSCGRG00001017825)	Megf11 (ENSCGRG00001019210)	Rab11a (ENSCGRG00001023313)	Dennd4a (ENSCGRG00001019979)	Slc24a1 (ENSCGRG00001023812)	Ints14 (ENSCGRG00001022061)	Hacd3 (ENSCGRG00001019214)	Dpp8 (ENSCGRG00001024771)	Igdcc4 (ENSCGRG00001004819)
Cricetidae_B	ANCESTRAL SPECIES	24	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Prairie vole	MODERN SPECIES	13	Glce (ENSMOCG00000019169)	Spesp1 (ENSMOCG00000016907)	ENSMOCG00000014776	ENSMOCG00000004428	Coro2b (ENSMOCG00000011097)	Itga11 (ENSMOCG00000003119) #12	Fem1b (ENSMOCG00000005442) #13	Cln6 (ENSMOCG00000021992) #14	Calml4 (ENSMOCG00000018493) #15	Pias1 (ENSMOCG00000022074) #16	ENSMOCG00000019235	Skor1 (ENSMOCG00000018261) #18	Map2k5 (ENSMOCG00000022058) #19	2300009A05Rik (ENSMOCG00000013991) #20	Iqch (ENSMOCG00000016873) #21	Aagab (ENSMOCG00000021340) #22	Smad3 (ENSMOCG00000018490) #23	Smad6 (ENSMOCG00000014458) #25	Lctl (ENSMOCG00000004744) #26	Zwilch (ENSMOCG00000017159) #27	ENSMOCG00000021901 #28	Snapc5 (ENSMOCG00000015348) #29	Map2k1 (ENSMOCG00000013072) #30	Tipin (ENSMOCG00000010343)	Dis3l (ENSMOCG00000005278)	Megf11 (ENSMOCG00000003573)	Rab11a (ENSMOCG00000021138)	Dennd4a (ENSMOCG00000008521)	Slc24a1 (ENSMOCG00000002968)	Ints14 (ENSMOCG00000020364)	Hacd3 (ENSMOCG00000004995)
Northern American deer mouse	MODERN SPECIES	20	Glce (ENSPEMG00000030703)	ENSPEMG00000017757	Anp32a (ENSPEMG00000017392)	Coro2b (ENSPEMG00000016326)	Itga11 (ENSPEMG00000014149) #12	Fem1b (ENSPEMG00000028410) #13	ENSPEMG00000000682	Cln6 (ENSPEMG00000030484) #14	Calml4 (ENSPEMG00000012833) #15	Pias1 (ENSPEMG00000012119) #16	Skor1 (ENSPEMG00000010499) #18	Map2k5 (ENSPEMG00000010361) #19	2300009A05Rik (ENSPEMG00000009306) #20	Iqch (ENSPEMG00000005753) #21	ENSPEMG00000028831	Aagab (ENSPEMG00000018465) #22	Smad3 (ENSPEMG00000028676) #23	Smad6 (ENSPEMG00000017040) #25	Lctl (ENSPEMG00000016229) #26	Zwilch (ENSPEMG00000014485) #27	Rpl4 (ENSPEMG00000012064) #28	Snapc5 (ENSPEMG00000007852) #29	Map2k1 (ENSPEMG00000007282) #30	Tipin (ENSPEMG00000002370)	Dis3l (ENSPEMG00000001213)	Megf11 (ENSPEMG00000017797)	ENSPEMG00000021125	Dennd4a (ENSPEMG00000022452)	Slc24a1 (ENSPEMG00000022814)	Ints14 (ENSPEMG00000008550)	Hacd3 (ENSPEMG00000008076)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Mus	ANCESTRAL SPECIES	4	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486	ENSGT00530000062962.b.a
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859.e.b #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00940000154925.c.a	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486
Mouse	MODERN SPECIES	18	Kif23 (ENSMUSG00000032254)	Paqr5 (ENSMUSG00000032278)	Glce (ENSMUSG00000032252)	Spesp1 (ENSMUSG00000046846)	Anp32a (ENSMUSG00000032249)	Coro2b (ENSMUSG00000041729)	Itga11 (ENSMUSG00000032243) #12	Fem1b (ENSMUSG00000032244) #13	Cln6 (ENSMUSG00000032245) #14	Calml4 (ENSMUSG00000032246) #15	Pias1 (ENSMUSG00000032405) #16	Skor1 (ENSMUSG00000022245) #18	Map2k5 (ENSMUSG00000058444) #19	2300009A05Rik (ENSMUSG00000032403) #20	Iqch (ENSMUSG00000037801) #21	Aagab (ENSMUSG00000037257) #22	Smad3 (ENSMUSG00000032402) #23	Smad6 (ENSMUSG00000036867) #25	Lctl (ENSMUSG00000032401) #26	Zwilch (ENSMUSG00000032400) #27	Rpl4 (ENSMUSG00000032399) #28	Snapc5 (ENSMUSG00000032398) #29	Map2k1 (ENSMUSG00000004936) #30	Uchl4 (ENSMUSG00000035337)	Tipin (ENSMUSG00000032397)	Dis3l (ENSMUSG00000032396)	Megf11 (ENSMUSG00000036466)	Rab11a (ENSMUSG00000004771)	Dennd4a (ENSMUSG00000053641)	Slc24a1 (ENSMUSG00000034452)	Ints14 (ENSMUSG00000034263)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000155837	ENSGT00940000158844	ENSGT00390000006043	ENSGT00390000005362	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859.e.b #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00940000154925.c.a	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486
spretus	MODERN SPECIES	18	Paqr5 (MGP_SPRETEiJ_G0033458)	Glce (MGP_SPRETEiJ_G0033459)	Spesp1 (MGP_SPRETEiJ_G0033460)	Anp32a (MGP_SPRETEiJ_G0033461)	Coro2b (MGP_SPRETEiJ_G0033462)	Itga11 (MGP_SPRETEiJ_G0033463) #12	Fem1b (MGP_SPRETEiJ_G0033464) #13	Cln6 (MGP_SPRETEiJ_G0033465) #14	MGP_SPRETEiJ_G0033466	Calml4 (MGP_SPRETEiJ_G0033467) #15	Pias1 (MGP_SPRETEiJ_G0033468) #16	Skor1 (MGP_SPRETEiJ_G0033469) #18	Map2k5 (MGP_SPRETEiJ_G0033470) #19	2300009A05Rik (MGP_SPRETEiJ_G0033471) #20	Iqch (MGP_SPRETEiJ_G0033472) #21	Aagab (MGP_SPRETEiJ_G0033473) #22	Smad3 (MGP_SPRETEiJ_G0033474) #23	Smad6 (MGP_SPRETEiJ_G0033475) #25	Lctl (MGP_SPRETEiJ_G0033476) #26	Zwilch (MGP_SPRETEiJ_G0033477) #27	Rpl4 (MGP_SPRETEiJ_G0033478) #28	Snapc5 (MGP_SPRETEiJ_G0033479) #29	Map2k1 (MGP_SPRETEiJ_G0033480) #30	MGP_SPRETEiJ_G0033481	Tipin (MGP_SPRETEiJ_G0033482)	Dis3l (MGP_SPRETEiJ_G0033483)	Megf11 (MGP_SPRETEiJ_G0033484)	Rab11a (MGP_SPRETEiJ_G0033485)	Dennd4a (MGP_SPRETEiJ_G0033486)	Slc24a1 (MGP_SPRETEiJ_G0033487)	Ints14 (MGP_SPRETEiJ_G0033488)
Steppe mouse	MODERN SPECIES	3365	Paqr5 (ENSMSIG00000001567)	Glce (ENSMSIG00000001614)	Spesp1 (ENSMSIG00000001679)	ENSMSIG00000001693	Coro2b (ENSMSIG00000001799)	Itga11 (ENSMSIG00000001884) #12	Fem1b (ENSMSIG00000001951) #13	Cln6 (ENSMSIG00000001974) #14	ENSMSIG00000001996 #15	Pias1 (ENSMSIG00000002027) #16	Skor1 (ENSMSIG00000002179) #18	Map2k5 (ENSMSIG00000002321) #19	2300009A05Rik (ENSMSIG00000002599) #20	Iqch (ENSMSIG00000002651) #21	ENSMSIG00000003630	Aagab (ENSMSIG00000003642) #22	Smad3 (ENSMSIG00000003679) #23	ENSMSIG00000003710	Smad6 (ENSMSIG00000003718) #25	ENSMSIG00000003749	ENSMSIG00000003769	Lctl (ENSMSIG00000003776) #26	Zwilch (ENSMSIG00000003872) #27	Rpl4 (ENSMSIG00000004124) #28	Snapc5 (ENSMSIG00000004231) #29	Map2k1 (ENSMSIG00000004246) #30	Uchl4 (ENSMSIG00000004289)	Tipin (ENSMSIG00000004296)	Dis3l (ENSMSIG00000004353)	Megf11 (ENSMSIG00000004481)	Rab11a (ENSMSIG00000004938)
Ryukyu mouse	MODERN SPECIES	18	Kif23 (MGP_CAROLIEiJ_G0032319)	Paqr5 (MGP_CAROLIEiJ_G0032320)	Glce (MGP_CAROLIEiJ_G0032321)	Spesp1 (MGP_CAROLIEiJ_G0032322)	Anp32a (MGP_CAROLIEiJ_G0032323)	Coro2b (MGP_CAROLIEiJ_G0032324)	Itga11 (MGP_CAROLIEiJ_G0032325) #12	Fem1b (MGP_CAROLIEiJ_G0032326) #13	Cln6 (MGP_CAROLIEiJ_G0032327) #14	Calml4 (MGP_CAROLIEiJ_G0032328) #15	Pias1 (MGP_CAROLIEiJ_G0032329) #16	Skor1 (MGP_CAROLIEiJ_G0032330) #18	Map2k5 (MGP_CAROLIEiJ_G0032331) #19	2300009A05Rik (MGP_CAROLIEiJ_G0032332) #20	Iqch (MGP_CAROLIEiJ_G0032333) #21	Aagab (MGP_CAROLIEiJ_G0032334) #22	Smad3 (MGP_CAROLIEiJ_G0032335) #23	Smad6 (MGP_CAROLIEiJ_G0032336) #25	Lctl (MGP_CAROLIEiJ_G0032337) #26	Zwilch (MGP_CAROLIEiJ_G0032338) #27	Rpl4 (MGP_CAROLIEiJ_G0032339) #28	Snapc5 (MGP_CAROLIEiJ_G0032340) #29	Map2k1 (MGP_CAROLIEiJ_G0032341) #30	MGP_CAROLIEiJ_G0032342	Tipin (MGP_CAROLIEiJ_G0032343)	Dis3l (MGP_CAROLIEiJ_G0032344)	Megf11 (MGP_CAROLIEiJ_G0032345)	Rab11a (MGP_CAROLIEiJ_G0032346)	Dennd4a (MGP_CAROLIEiJ_G0032347)	Slc24a1 (MGP_CAROLIEiJ_G0032348)	Ints14 (MGP_CAROLIEiJ_G0032349)
Shrew mouse	MODERN SPECIES	1	Kif23 (MGP_PahariEiJ_G0015185)	Paqr5 (MGP_PahariEiJ_G0015186)	Glce (MGP_PahariEiJ_G0015187)	Spesp1 (MGP_PahariEiJ_G0015188)	Anp32a (MGP_PahariEiJ_G0015189)	Coro2b (MGP_PahariEiJ_G0015190)	Itga11 (MGP_PahariEiJ_G0015191) #12	Fem1b (MGP_PahariEiJ_G0015192) #13	MGP_PahariEiJ_G0015193	Calml4 (MGP_PahariEiJ_G0015194) #15	Pias1 (MGP_PahariEiJ_G0015195) #16	Skor1 (MGP_PahariEiJ_G0015196) #18	Map2k5 (MGP_PahariEiJ_G0015197) #19	2300009A05Rik (MGP_PahariEiJ_G0015198) #20	Iqch (MGP_PahariEiJ_G0015199) #21	Aagab (MGP_PahariEiJ_G0015200) #22	Smad3 (MGP_PahariEiJ_G0015201) #23	Smad6 (MGP_PahariEiJ_G0015202) #25	Zwilch (MGP_PahariEiJ_G0015204) #27	Rpl4 (MGP_PahariEiJ_G0015205) #28	Snapc5 (MGP_PahariEiJ_G0015206) #29	Map2k1 (MGP_PahariEiJ_G0015207) #30	Tipin (MGP_PahariEiJ_G0015208)	Dis3l (MGP_PahariEiJ_G0015209)	Megf11 (MGP_PahariEiJ_G0015210)	Rab11a (MGP_PahariEiJ_G0015211)	Dennd4a (MGP_PahariEiJ_G0015212)	Slc24a1 (MGP_PahariEiJ_G0015213)	Ints14 (MGP_PahariEiJ_G0015214)	Hacd3 (MGP_PahariEiJ_G0015215)	Dpp8 (MGP_PahariEiJ_G0015216)
Rat	MODERN SPECIES	18	Paqr5 (ENSRNOG00000014164)	Glce (ENSRNOG00000025372)	Spesp1 (ENSRNOG00000025359)	Anp32a (ENSRNOG00000014846)	Coro2b (ENSRNOG00000015257)	Itga11 (ENSRNOG00000006723) #12	Fem1b (ENSRNOG00000007077) #13	Cln6 (ENSRNOG00000007164) #14	Calml4 (ENSRNOG00000038202) #15	Pias1 (ENSRNOG00000034272) #16	Skor1 (ENSRNOG00000013959) #18	Map2k5 (ENSRNOG00000007926) #19	AC132740.1 (ENSRNOG00000054780)	C8h15orf61 (ENSRNOG00000008340) #20	Iqch (ENSRNOG00000008353) #21	Aagab (ENSRNOG00000008424) #22	Smad3 (ENSRNOG00000008620) #23	Smad6 (ENSRNOG00000009173) #25	Lctl (ENSRNOG00000009193) #26	Zwilch (ENSRNOG00000009303) #27	Rpl4 (ENSRNOG00000009378) #28	Map2k1 (ENSRNOG00000010176) #30	Tipin (ENSRNOG00000043068)	Dis3l (ENSRNOG00000010537)	Megf11 (ENSRNOG00000010634)	Rab11a (ENSRNOG00000011302)	LOC120094392 (ENSRNOG00000071140)	Dennd4a (ENSRNOG00000011739)	Slc24a1 (ENSRNOG00000052051)	Ints14 (ENSRNOG00000012469)	Hacd3 (ENSRNOG00000030232)
Upper Galilee mountains blind mole rat	MODERN SPECIES	955	Paqr5 (ENSNGAG00000002130)	Glce (ENSNGAG00000014759)	Spesp1 (ENSNGAG00000012498)	ENSNGAG00000005322	ENSNGAG00000017524	Coro2b (ENSNGAG00000024331)	Itga11 (ENSNGAG00000024101) #12	ENSNGAG00000021620 #13	Cln6 (ENSNGAG00000023832) #14	Calml4 (ENSNGAG00000016088) #15	Pias1 (ENSNGAG00000022735) #16	Skor1 (ENSNGAG00000020060) #18	Map2k5 (ENSNGAG00000011076) #19	2300009A05Rik (ENSNGAG00000004715) #20	Iqch (ENSNGAG00000019505) #21	ENSNGAG00000010708 #22	Smad3 (ENSNGAG00000023535) #23	ENSNGAG00000022756	Smad6 (ENSNGAG00000021223) #25	Lctl (ENSNGAG00000012911) #26	Zwilch (ENSNGAG00000016626) #27	ENSNGAG00000006653 #28	Snapc5 (ENSNGAG00000006133) #29	Map2k1 (ENSNGAG00000006894) #30	Tipin (ENSNGAG00000018237)	Dis3l (ENSNGAG00000017008)	Megf11 (ENSNGAG00000011352)	Rab11a (ENSNGAG00000013726)	ENSNGAG00000022619	Slc24a1 (ENSNGAG00000010674)	Ints14 (ENSNGAG00000007105)
Lesser Egyptian jerboa	MODERN SPECIES	92					Anp32a (ENSJJAG00000019278)	Coro2b (ENSJJAG00000003058)	Itga11 (ENSJJAG00000007244) #12	Fem1b (ENSJJAG00000018686) #13	Cln6 (ENSJJAG00000024405) #14	Calml4 (ENSJJAG00000014113) #15	ENSJJAG00000019728 #16	Skor1 (ENSJJAG00000003624) #18	Map2k5 (ENSJJAG00000024208) #19	2300009A05Rik (ENSJJAG00000019436) #20	Iqch (ENSJJAG00000024416) #21	ENSJJAG00000018312 #22	Smad3 (ENSJJAG00000021414) #23	Smad6 (ENSJJAG00000019623) #25	Lctl (ENSJJAG00000013579) #26	Zwilch (ENSJJAG00000010189) #27	ENSJJAG00000013677 #28	Snapc5 (ENSJJAG00000022013) #29	Map2k1 (ENSJJAG00000021452) #30	Tipin (ENSJJAG00000017947)	Dis3l (ENSJJAG00000016147)	ENSJJAG00000019234	Megf11 (ENSJJAG00000023890)	ENSJJAG00000015445	ENSJJAG00000012113	Slc24a1 (ENSJJAG00000009344)	Ints14 (ENSJJAG00000005359)
Lagomorpha	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.b	ENSGT00940000154201.a.b	ENSGT00950000183129.b.b	ENSGT00390000008859.b.d.j	ENSGT00940000159572	ENSGT00390000014038	ENSGT00940000154905	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #15	ENSGT01030000234539.a.a.b.a.b #16	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00950000183167.a.b.a #24	ENSGT00940000158146 #25	ENSGT00940000157369 #26	ENSGT00390000013696 #27	ENSGT00390000018145 #28	ENSGT00390000010331 #29	ENSGT00940000153487.b.b #30	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.B	ENSGT00940000154914	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b	ENSGT00390000009486
Rabbit	MODERN SPECIES	8	ENSOCUG00000009207	HEXA (ENSOCUG00000009190)	CELF6 (ENSOCUG00000021663)	PARP6 (ENSOCUG00000004374)	ENSOCUG00000006119	GRAMD2A (ENSOCUG00000006107)	SENP8 (ENSOCUG00000026054)	MYO9A (ENSOCUG00000017425)	ENSOCUG00000036279	ITGA11 (ENSOCUG00000017726) #12	FEM1B (ENSOCUG00000026586) #13	CLN6 (ENSOCUG00000017533) #14	PIAS1 (ENSOCUG00000000618) #16	MAP2K5 (ENSOCUG00000009024) #19	IQCH (ENSOCUG00000006647) #21	AAGAB (ENSOCUG00000006644) #22	ENSOCUG00000039204	SMAD3 (ENSOCUG00000029601) #23	ENSOCUG00000014186 #24	ENSOCUG00000006134 #25	LCTL (ENSOCUG00000021771) #26	ZWILCH (ENSOCUG00000008800) #27	ENSOCUG00000008794 #28	SNAPC5 (ENSOCUG00000039231) #29	MAP2K1 (ENSOCUG00000008782) #30	ENSOCUG00000023060	TIPIN (ENSOCUG00000002212)	DIS3L (ENSOCUG00000002206)	MEGF11 (ENSOCUG00000014760)	RAB11A (ENSOCUG00000014755)	DENND4A (ENSOCUG00000007953)
Pika	MODERN SPECIES	1524																AAGAB (ENSOPRG00000015012) #22	SMAD3 (ENSOPRG00000014996) #23	SMAD6 (ENSOPRG00000014974) #25	IQCH (ENSOPRG00000014936) #21