Mus	ANCESTRAL SPECIES	4	ENSGT00940000155837	ENSGT00940000158844 #7	ENSGT00390000006043 #8	ENSGT00390000005362 #9	ENSGT00950000182907.a.b.b.b #10	ENSGT00940000158689 #11	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #16	ENSGT01030000234539.a.a.b.a.b #17	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #24	ENSGT00940000157369 #25	ENSGT00390000013696 #26	ENSGT00390000018145 #27	ENSGT00390000010331 #28	ENSGT00940000153487.b.b #29	ENSGT00390000005764 #31	ENSGT00530000063106.B #32	ENSGT00940000155333.B #33	ENSGT00940000154914 #34	ENSGT00940000155836.B #35	ENSGT01030000234532.B.e.b #36	ENSGT00390000009486 #37	ENSGT00530000062962.b.a
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000155837	ENSGT00940000158844 #7	ENSGT00390000006043 #8	ENSGT00390000005362 #9	ENSGT00950000182907.a.b.b.b #10	ENSGT00940000158689 #11	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859 #16	ENSGT01030000234539.a.a.b.a.b #17	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #24	ENSGT00940000157369 #25	ENSGT00390000013696 #26	ENSGT00390000018145 #27	ENSGT00390000010331 #28	ENSGT00940000153487.b.b #29	ENSGT00390000005764 #31	ENSGT00530000063106.B #32	ENSGT00940000155333.B #33	ENSGT00940000154914 #34	ENSGT00940000155836.B #35	ENSGT01030000234532.B.e.b #36	ENSGT00390000009486 #37	ENSGT00530000062962.b.a
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000155837	ENSGT00940000158844 #7	ENSGT00390000006043 #8	ENSGT00390000005362 #9	ENSGT00950000182907.a.b.b.b #10	ENSGT00940000158689 #11	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859.e.b ##16	ENSGT01030000234539.a.a.b.a.b #17	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #24	ENSGT00940000157369 #25	ENSGT00390000013696 #26	ENSGT00390000018145 #27	ENSGT00390000010331 #28	ENSGT00940000153487.b.b #29	ENSGT00940000154925.c.a ##30	ENSGT00390000005764 #31	ENSGT00530000063106.B #32	ENSGT00940000155333.B #33	ENSGT00940000154914 #34	ENSGT00940000155836.B #35	ENSGT01030000234532.B.e.b #36	ENSGT00390000009486 #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000155837	ENSGT00940000158844 #7	ENSGT00390000006043 #8	ENSGT00390000005362 #9	ENSGT00950000182907.a.b.b.b #10	ENSGT00940000158689 #11	ENSGT00940000155465 #12	ENSGT00940000161115 #13	ENSGT00400000022240 #14	ENSGT00940000157859.e.b ##16	ENSGT01030000234539.a.a.b.a.b #17	ENSGT00940000158440 #18	ENSGT00940000157505 #19	ENSGT00390000015942 #20	ENSGT00390000008908 #21	ENSGT00390000007218 #22	ENSGT00940000153499.b.b #23	ENSGT00940000158146 #24	ENSGT00940000157369 #25	ENSGT00390000013696 #26	ENSGT00390000018145 #27	ENSGT00390000010331 #28	ENSGT00940000153487.b.b #29	ENSGT00940000154925.c.a ##30	ENSGT00390000005764 #31	ENSGT00530000063106.B #32	ENSGT00940000155333.B #33	ENSGT00940000154914 #34	ENSGT00940000155836.B #35	ENSGT01030000234532.B.e.b #36	ENSGT00390000009486 #37
spretus	MODERN SPECIES	18	Paqr5 (MGP_SPRETEiJ_G0033458) #7	Glce (MGP_SPRETEiJ_G0033459) #8	Spesp1 (MGP_SPRETEiJ_G0033460) #9	Anp32a (MGP_SPRETEiJ_G0033461) #10	Coro2b (MGP_SPRETEiJ_G0033462) #11	Itga11 (MGP_SPRETEiJ_G0033463) #12	Fem1b (MGP_SPRETEiJ_G0033464) #13	Cln6 (MGP_SPRETEiJ_G0033465) #14	MGP_SPRETEiJ_G0033466 #15	Calml4 (MGP_SPRETEiJ_G0033467) #16	Pias1 (MGP_SPRETEiJ_G0033468) #17	Skor1 (MGP_SPRETEiJ_G0033469) #18	Map2k5 (MGP_SPRETEiJ_G0033470) #19	2300009A05Rik (MGP_SPRETEiJ_G0033471) #20	Iqch (MGP_SPRETEiJ_G0033472) #21	Aagab (MGP_SPRETEiJ_G0033473) #22	Smad3 (MGP_SPRETEiJ_G0033474) #23	Smad6 (MGP_SPRETEiJ_G0033475) #24	Lctl (MGP_SPRETEiJ_G0033476) #25	Zwilch (MGP_SPRETEiJ_G0033477) #26	Rpl4 (MGP_SPRETEiJ_G0033478) #27	Snapc5 (MGP_SPRETEiJ_G0033479) #28	Map2k1 (MGP_SPRETEiJ_G0033480) #29	MGP_SPRETEiJ_G0033481 #30	Tipin (MGP_SPRETEiJ_G0033482) #31	Dis3l (MGP_SPRETEiJ_G0033483) #32	Megf11 (MGP_SPRETEiJ_G0033484) #33	Rab11a (MGP_SPRETEiJ_G0033485) #34	Dennd4a (MGP_SPRETEiJ_G0033486) #35	Slc24a1 (MGP_SPRETEiJ_G0033487) #36	Ints14 (MGP_SPRETEiJ_G0033488) #37
Steppe mouse	MODERN SPECIES	3365	Paqr5 (ENSMSIG00000001567) #7	Glce (ENSMSIG00000001614) #8	Spesp1 (ENSMSIG00000001679) #9	ENSMSIG00000001693 #10	Coro2b (ENSMSIG00000001799) #11	Itga11 (ENSMSIG00000001884) #12	Fem1b (ENSMSIG00000001951) #13	Cln6 (ENSMSIG00000001974) #14	ENSMSIG00000001996 ##16	Pias1 (ENSMSIG00000002027) #17	Skor1 (ENSMSIG00000002179) #18	Map2k5 (ENSMSIG00000002321) #19	2300009A05Rik (ENSMSIG00000002599) #20	Iqch (ENSMSIG00000002651) #21	ENSMSIG00000003630	Aagab (ENSMSIG00000003642) #22	Smad3 (ENSMSIG00000003679) #23	ENSMSIG00000003710	Smad6 (ENSMSIG00000003718) #24	ENSMSIG00000003749	ENSMSIG00000003769	Lctl (ENSMSIG00000003776) #25	Zwilch (ENSMSIG00000003872) #26	Rpl4 (ENSMSIG00000004124) #27	Snapc5 (ENSMSIG00000004231) #28	Map2k1 (ENSMSIG00000004246) #29	Uchl4 (ENSMSIG00000004289) ##30	Tipin (ENSMSIG00000004296) #31	Dis3l (ENSMSIG00000004353) #32	Megf11 (ENSMSIG00000004481) #33	Rab11a (ENSMSIG00000004938) #34
Mouse	MODERN SPECIES	18	Kif23 (ENSMUSG00000032254)	Paqr5 (ENSMUSG00000032278) #7	Glce (ENSMUSG00000032252) #8	Spesp1 (ENSMUSG00000046846) #9	Anp32a (ENSMUSG00000032249) #10	Coro2b (ENSMUSG00000041729) #11	Itga11 (ENSMUSG00000032243) #12	Fem1b (ENSMUSG00000032244) #13	Cln6 (ENSMUSG00000032245) #14	Calml4 (ENSMUSG00000032246) ##16	Pias1 (ENSMUSG00000032405) #17	Skor1 (ENSMUSG00000022245) #18	Map2k5 (ENSMUSG00000058444) #19	2300009A05Rik (ENSMUSG00000032403) #20	Iqch (ENSMUSG00000037801) #21	Aagab (ENSMUSG00000037257) #22	Smad3 (ENSMUSG00000032402) #23	Smad6 (ENSMUSG00000036867) #24	Lctl (ENSMUSG00000032401) #25	Zwilch (ENSMUSG00000032400) #26	Rpl4 (ENSMUSG00000032399) #27	Snapc5 (ENSMUSG00000032398) #28	Map2k1 (ENSMUSG00000004936) #29	Uchl4 (ENSMUSG00000035337) ##30	Tipin (ENSMUSG00000032397) #31	Dis3l (ENSMUSG00000032396) #32	Megf11 (ENSMUSG00000036466) #33	Rab11a (ENSMUSG00000004771) #34	Dennd4a (ENSMUSG00000053641) #35	Slc24a1 (ENSMUSG00000034452) #36	Ints14 (ENSMUSG00000034263) #37
Ryukyu mouse	MODERN SPECIES	18	Kif23 (MGP_CAROLIEiJ_G0032319)	Paqr5 (MGP_CAROLIEiJ_G0032320) #7	Glce (MGP_CAROLIEiJ_G0032321) #8	Spesp1 (MGP_CAROLIEiJ_G0032322) #9	Anp32a (MGP_CAROLIEiJ_G0032323) #10	Coro2b (MGP_CAROLIEiJ_G0032324) #11	Itga11 (MGP_CAROLIEiJ_G0032325) #12	Fem1b (MGP_CAROLIEiJ_G0032326) #13	Cln6 (MGP_CAROLIEiJ_G0032327) #14	Calml4 (MGP_CAROLIEiJ_G0032328) #16	Pias1 (MGP_CAROLIEiJ_G0032329) #17	Skor1 (MGP_CAROLIEiJ_G0032330) #18	Map2k5 (MGP_CAROLIEiJ_G0032331) #19	2300009A05Rik (MGP_CAROLIEiJ_G0032332) #20	Iqch (MGP_CAROLIEiJ_G0032333) #21	Aagab (MGP_CAROLIEiJ_G0032334) #22	Smad3 (MGP_CAROLIEiJ_G0032335) #23	Smad6 (MGP_CAROLIEiJ_G0032336) #24	Lctl (MGP_CAROLIEiJ_G0032337) #25	Zwilch (MGP_CAROLIEiJ_G0032338) #26	Rpl4 (MGP_CAROLIEiJ_G0032339) #27	Snapc5 (MGP_CAROLIEiJ_G0032340) #28	Map2k1 (MGP_CAROLIEiJ_G0032341) #29	MGP_CAROLIEiJ_G0032342 ##30	Tipin (MGP_CAROLIEiJ_G0032343) #31	Dis3l (MGP_CAROLIEiJ_G0032344) #32	Megf11 (MGP_CAROLIEiJ_G0032345) #33	Rab11a (MGP_CAROLIEiJ_G0032346) #34	Dennd4a (MGP_CAROLIEiJ_G0032347) #35	Slc24a1 (MGP_CAROLIEiJ_G0032348) #36	Ints14 (MGP_CAROLIEiJ_G0032349) #37
Shrew mouse	MODERN SPECIES	1	Kif23 (MGP_PahariEiJ_G0015185)	Paqr5 (MGP_PahariEiJ_G0015186) #7	Glce (MGP_PahariEiJ_G0015187) #8	Spesp1 (MGP_PahariEiJ_G0015188) #9	Anp32a (MGP_PahariEiJ_G0015189) #10	Coro2b (MGP_PahariEiJ_G0015190) #11	Itga11 (MGP_PahariEiJ_G0015191) #12	Fem1b (MGP_PahariEiJ_G0015192) #13	MGP_PahariEiJ_G0015193	Calml4 (MGP_PahariEiJ_G0015194) #16	Pias1 (MGP_PahariEiJ_G0015195) #17	Skor1 (MGP_PahariEiJ_G0015196) #18	Map2k5 (MGP_PahariEiJ_G0015197) #19	2300009A05Rik (MGP_PahariEiJ_G0015198) #20	Iqch (MGP_PahariEiJ_G0015199) #21	Aagab (MGP_PahariEiJ_G0015200) #22	Smad3 (MGP_PahariEiJ_G0015201) #23	Smad6 (MGP_PahariEiJ_G0015202) #24	Zwilch (MGP_PahariEiJ_G0015204) #26	Rpl4 (MGP_PahariEiJ_G0015205) #27	Snapc5 (MGP_PahariEiJ_G0015206) #28	Map2k1 (MGP_PahariEiJ_G0015207) #29	Tipin (MGP_PahariEiJ_G0015208) #31	Dis3l (MGP_PahariEiJ_G0015209) #32	Megf11 (MGP_PahariEiJ_G0015210) #33	Rab11a (MGP_PahariEiJ_G0015211) #34	Dennd4a (MGP_PahariEiJ_G0015212) #35	Slc24a1 (MGP_PahariEiJ_G0015213) #36	Ints14 (MGP_PahariEiJ_G0015214) #37	Hacd3 (MGP_PahariEiJ_G0015215)	Dpp8 (MGP_PahariEiJ_G0015216)