Mammalia	ANCESTRAL SPECIES	38	ENSGT00530000063712.a.b #10	ENSGT00940000163503.B	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000165918	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185
Theria	ANCESTRAL SPECIES	35	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000163503.B	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000163503.B	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Primates	ANCESTRAL SPECIES	14	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00910000147240	ENSGT00940000153340.B.k.b	ENSGT00910000147230	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT01100000264019 #20	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT01100000264019 #20	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT01100000264019 #20	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Drill	MODERN SPECIES	273	VSNL1 (ENSMLEG00000009493) #7	SMC6 (ENSMLEG00000038093) #8	GEN1 (ENSMLEG00000037009) #9	MSGN1 (ENSMLEG00000016060) #10	KCNS3 (ENSMLEG00000024480) #11	NT5C1B (ENSMLEG00000032260) #12	OSR1 (ENSMLEG00000036388) #13	ENSMLEG00000035262 #14	TTC32 (ENSMLEG00000034466) #15	WDR35 (ENSMLEG00000042194) #16	MATN3 (ENSMLEG00000028366) #17	LAPTM4A (ENSMLEG00000011616) #18	SDC1 (ENSMLEG00000030457) #19	ENSMLEG00000041181 #20	PUM2 (ENSMLEG00000039243) #21	RHOB (ENSMLEG00000014328) #22	HS1BP3 (ENSMLEG00000036114) #23	GDF7 (ENSMLEG00000030590) #24	LDAH (ENSMLEG00000032951) #25	APOB (ENSMLEG00000034887) #26
Sooty mangabey	MODERN SPECIES	542	GEN1 (ENSCATG00000002261) #9	MSGN1 (ENSCATG00000020832) #10	KCNS3 (ENSCATG00000019098) #11	RDH14 (ENSCATG00000040055)	NT5C1B (ENSCATG00000030226) #12	OSR1 (ENSCATG00000041386) #13	ENSCATG00000035076	ENSCATG00000035517 #14	TTC32 (ENSCATG00000043877) #15	WDR35 (ENSCATG00000043847) #16	MATN3 (ENSCATG00000038685) #17	LAPTM4A (ENSCATG00000036860) #18	SDC1 (ENSCATG00000044796) #19	ENSCATG00000041330 #20	PUM2 (ENSCATG00000043826) #21	RHOB (ENSCATG00000021066) #22	ENSCATG00000037321	HS1BP3 (ENSCATG00000038867) #23	GDF7 (ENSCATG00000015865) #24	LDAH (ENSCATG00000025214) #25	APOB (ENSCATG00000025709) #26	TDRD15 (ENSCATG00000014633)	KLHL29 (ENSCATG00000037112)	ENSCATG00000036009	ATAD2B (ENSCATG00000035587)	UBXN2A (ENSCATG00000007176)	MFSD2B (ENSCATG00000040488)	WDCP (ENSCATG00000030463)	FKBP1B (ENSCATG00000016638)	SF3B6 (ENSCATG00000030936)	TP53I3 (ENSCATG00000040448)
Olive baboon	MODERN SPECIES	5	RAD51AP2 (ENSPANG00000022532)	ENSPANG00000022533 #7	SMC6 (ENSPANG00000018608) #8	GEN1 (ENSPANG00000008635) #9	MSGN1 (ENSPANG00000004064) #10	KCNS3 (ENSPANG00000010367) #11	RDH14 (ENSPANG00000007663)	OSR1 (ENSPANG00000045188) #13	ENSPANG00000033126	TTC32 (ENSPANG00000015095) #15	WDR35 (ENSPANG00000019305) #16	MATN3 (ENSPANG00000019588) #17	LAPTM4A (ENSPANG00000011260) #18	ENSPANG00000033560 #20	PUM2 (ENSPANG00000009393) #21	RHOB (ENSPANG00000016884) #22	HS1BP3 (ENSPANG00000008436) #23	GDF7 (ENSPANG00000015811) #24	LDAH (ENSPANG00000017330) #25	APOB (ENSPANG00000015810) #26	TDRD15 (ENSPANG00000009392)	ENSPANG00000044101	ENSPANG00000040985	KLHL29 (ENSPANG00000022340)	ATAD2B (ENSPANG00000021884)	UBXN2A (ENSPANG00000013688)	MFSD2B (ENSPANG00000005498)	WDCP (ENSPANG00000024219)	FKBP1B (ENSPANG00000031212)	SF3B6 (ENSPANG00000021963)	TP53I3 (ENSPANG00000019585)
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT01100000264019 #20	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092.c #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Pig-tailed macaque	MODERN SPECIES	561	GEN1 (ENSMNEG00000041505) #9	MSGN1 (ENSMNEG00000009838) #10	KCNS3 (ENSMNEG00000010748) #11	RDH14 (ENSMNEG00000042523)	NT5C1B (ENSMNEG00000031824) #12	OSR1 (ENSMNEG00000024040) #13	ENSMNEG00000040736	ENSMNEG00000000256 #14	TTC32 (ENSMNEG00000032654) #15	WDR35 (ENSMNEG00000043506) #16	MATN3 (ENSMNEG00000040055) #17	LAPTM4A (ENSMNEG00000030721) #18	SDC1 (ENSMNEG00000037009) #19	ENSMNEG00000031627 #20	PUM2 (ENSMNEG00000039659) #21	RHOB (ENSMNEG00000004093) #22	ENSMNEG00000035256	HS1BP3 (ENSMNEG00000042432) #23	GDF7 (ENSMNEG00000036625) #24	LDAH (ENSMNEG00000037298) #25	APOB (ENSMNEG00000041817) #26	TDRD15 (ENSMNEG00000018389)	KLHL29 (ENSMNEG00000040600)	ATAD2B (ENSMNEG00000040701)	UBXN2A (ENSMNEG00000039344)	MFSD2B (ENSMNEG00000042041)	WDCP (ENSMNEG00000043270)	FKBP1B (ENSMNEG00000044742)	SF3B6 (ENSMNEG00000029050)	TP53I3 (ENSMNEG00000040818)	PFN4 (ENSMNEG00000039662)
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT01100000264019 #20	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092.c #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT01100000263765.a.a.a.b	ENSGT00390000017067
Crab-eating macaque	MODERN SPECIES	4	KCNS3 (ENSMFAG00000007411) #11	NT5C1B (ENSMFAG00000002988) #12	ENSMFAG00000064231	ENSMFAG00000051219	ENSMFAG00000065687	ENSMFAG00000059615	OSR1 (ENSMFAG00000039189) #13	TTC32 (ENSMFAG00000040343) #15	WDR35 (ENSMFAG00000034406) #16	MATN3 (ENSMFAG00000043379) #17	ENSMFAG00000049571	LAPTM4A (ENSMFAG00000036772) #18	ENSMFAG00000064406 #19	ENSMFAG00000043647 #20	PUM2 (ENSMFAG00000000492) #21	RHOB (ENSMFAG00000030406) #22	HS1BP3 (ENSMFAG00000005189) #23	GDF7 (ENSMFAG00000049809) #24	ENSMFAG00000052727	LDAH (ENSMFAG00000036499) #25	ENSMFAG00000042760	APOB (ENSMFAG00000037483) #26	ENSMFAG00000060195	ENSMFAG00000051328	ENSMFAG00000064985	KLHL29 (ENSMFAG00000002617)	ATAD2B (ENSMFAG00000045919)	UBXN2A (ENSMFAG00000038617)	MFSD2B (ENSMFAG00000031201)	WDCP (ENSMFAG00000031254)	FKBP1B (ENSMFAG00000003240)
Vervet Monkey	MODERN SPECIES	5	RAD51AP2 (ENSCSAG00000007907)	VSNL1 (ENSCSAG00000007914) #7	SMC6 (ENSCSAG00000007925) #8	GEN1 (ENSCSAG00000007952) #9	MSGN1 (ENSCSAG00000000377) #10	KCNS3 (ENSCSAG00000000378) #11	RDH14 (ENSCSAG00000007969)	NT5C1B (ENSCSAG00000007999) #12	OSR1 (ENSCSAG00000008012) #13	TTC32 (ENSCSAG00000008028) #15	WDR35 (ENSCSAG00000008051) #16	MATN3 (ENSCSAG00000008064) #17	LAPTM4A (ENSCSAG00000008071) #18	SDC1 (ENSCSAG00000008077) #19	PUM2 (ENSCSAG00000008087) #21	RHOB (ENSCSAG00000000379) #22	HS1BP3 (ENSCSAG00000008096) #23	GDF7 (ENSCSAG00000008108) #24	LDAH (ENSCSAG00000008123) #25	APOB (ENSCSAG00000008169) #26	TDRD15 (ENSCSAG00000000380)	ENSCSAG00000008205	KLHL29 (ENSCSAG00000008250)	ATAD2B (ENSCSAG00000008290)	UBXN2A (ENSCSAG00000008300)	MFSD2B (ENSCSAG00000008345)	WDCP (ENSCSAG00000008372)	FKBP1B (ENSCSAG00000008381)	SF3B6 (ENSCSAG00000008390)	TP53I3 (ENSCSAG00000008398)	PFN4 (ENSCSAG00000008406)
Rhinopithecus	ANCESTRAL SPECIES	47	ENSGT00950000183117.b	ENSGT00940000161541	ENSGT00670000098076.i.a.b.g.b	ENSGT01030000234626.A.b.o.b	ENSGT00940000154677.g.a	ENSGT00530000063834.e.b	ENSGT00940000156975.u	ENSGT00390000003860.h.b	ENSGT00940000153739.a.b	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a	ENSGT00520000055578.a.b	ENSGT00940000153897.b.a.b	ENSGT00940000155459	ENSGT00950000182802.A.b	ENSGT00390000016811	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581
Golden snub-nosed monkey	MODERN SPECIES	2393	DRC1 (ENSRROG00000045724)	SELENOI (ENSRROG00000030657)	ADGRF3 (ENSRROG00000037215)	ENSRROG00000036092	HADHB (ENSRROG00000025585)	HADHA (ENSRROG00000032860)	GAREM2 (ENSRROG00000034425)	RAB10 (ENSRROG00000028647)	KIF3C (ENSRROG00000045700)	ENSRROG00000000064	ASXL2 (ENSRROG00000034489)	ENSRROG00000041965	DNMT3A (ENSRROG00000033151)	ENSRROG00000002529	POMC (ENSRROG00000045388)	RHOB (ENSRROG00000027959) #22	HS1BP3 (ENSRROG00000045342) #23	GDF7 (ENSRROG00000032206) #24	LDAH (ENSRROG00000042894) #25	APOB (ENSRROG00000034792) #26	TDRD15 (ENSRROG00000012190)
Black snub-nosed monkey	MODERN SPECIES	560	ENSRBIG00000010956	HADHB (ENSRBIG00000024676)	HADHA (ENSRBIG00000030017)	GAREM2 (ENSRBIG00000030250)	RAB10 (ENSRBIG00000044561)	ENSRBIG00000036827	KIF3C (ENSRBIG00000018579)	ENSRBIG00000038397	ENSRBIG00000036540	ASXL2 (ENSRBIG00000030906)	ENSRBIG00000033599	DNMT3A (ENSRBIG00000031793)	ENSRBIG00000029807	POMC (ENSRBIG00000014218)	ENSRBIG00000022710	RHOB (ENSRBIG00000023783) #22	HS1BP3 (ENSRBIG00000031881) #23	GDF7 (ENSRBIG00000031200) #24	ENSRBIG00000038314	LDAH (ENSRBIG00000039351) #25	APOB (ENSRBIG00000029398) #26	TDRD15 (ENSRBIG00000029133)
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Hominidae	ANCESTRAL SPECIES	19	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000076422	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00910000147240	ENSGT00940000164653	ENSGT00910000147230	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000076422	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Gorilla	MODERN SPECIES	14	GEN1 (ENSGGOG00000012157) #9	MSGN1 (ENSGGOG00000012168) #10	KCNS3 (ENSGGOG00000000972) #11	NT5C1B (ENSGGOG00000014980) #12	OSR1 (ENSGGOG00000016877) #13	ENSGGOG00000037043 #14	TTC32 (ENSGGOG00000009777) #15	WDR35 (ENSGGOG00000009782) #16	MATN3 (ENSGGOG00000009798) #17	LAPTM4A (ENSGGOG00000027710) #18	SDC1 (ENSGGOG00000041852) #19	ENSGGOG00000027238	ENSGGOG00000040988	ENSGGOG00000037272	PUM2 (ENSGGOG00000011374) #21	RHOB (ENSGGOG00000042542) #22	GDF7 (ENSGGOG00000000225) #24	LDAH (ENSGGOG00000000226) #25	APOB (ENSGGOG00000005179) #26	TDRD15 (ENSGGOG00000026710)	ENSGGOG00000024059	KLHL29 (ENSGGOG00000013889)	ATAD2B (ENSGGOG00000006027)	UBXN2A (ENSGGOG00000002445)	ENSGGOG00000036282	MFSD2B (ENSGGOG00000007752)	WDCP (ENSGGOG00000015146)	FKBP1B (ENSGGOG00000044101)	SF3B6 (ENSGGOG00000040806)	TP53I3 (ENSGGOG00000040915)	PFN4 (ENSGGOG00000028452)
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00910000147240	ENSGT00940000164653	ENSGT00910000147230	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000076422	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Human	MODERN SPECIES	11	VSNL1 (ENSG00000163032) #7	SMC6 (ENSG00000163029) #8	GEN1 (ENSG00000178295) #9	MSGN1 (ENSG00000151379) #10	KCNS3 (ENSG00000170745) #11	RDH14 (ENSG00000240857)	NT5C1B-RDH14 (ENSG00000250741)	NT5C1B (ENSG00000185013) #12	OSR1 (ENSG00000143867) #13	TTC32 (ENSG00000183891) #15	WDR35 (ENSG00000118965) #16	MATN3 (ENSG00000132031) #17	LAPTM4A (ENSG00000068697) #18	SDC1 (ENSG00000115884) #19	PUM2 (ENSG00000055917) #21	RHOB (ENSG00000143878) #22	HS1BP3 (ENSG00000118960) #23	GDF7 (ENSG00000143869) #24	LDAH (ENSG00000118961) #25	APOB (ENSG00000084674) #26	TDRD15 (ENSG00000218819)	KLHL29 (ENSG00000119771)	ATAD2B (ENSG00000119778)	UBXN2A (ENSG00000173960)	MFSD2B (ENSG00000205639)	WDCP (ENSG00000163026)	FKBP1B (ENSG00000119782)	SF3B6 (ENSG00000115128)	FAM228B (ENSG00000219626)	TP53I3 (ENSG00000115129)	PFN4 (ENSG00000176732)
Pan	ANCESTRAL SPECIES	17	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000154445.f.b.b	ENSGT00910000147213 #14	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00910000147240	ENSGT00940000164653	ENSGT00910000147230	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000002743.h	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000076422	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908
Bonobo	MODERN SPECIES	14	MSGN1 (ENSPPAG00000033217) #10	KCNS3 (ENSPPAG00000000574) #11	ENSPPAG00000033270	NT5C1B (ENSPPAG00000030956) #12	OSR1 (ENSPPAG00000032777) #13	ENSPPAG00000034662 #14	TTC32 (ENSPPAG00000035271) #15	WDR35 (ENSPPAG00000037901) #16	MATN3 (ENSPPAG00000035472) #17	LAPTM4A (ENSPPAG00000037069) #18	SDC1 (ENSPPAG00000037638) #19	ENSPPAG00000037572	ENSPPAG00000039090	PUM2 (ENSPPAG00000023095) #21	ENSPPAG00000039825	RHOB (ENSPPAG00000023187) #22	ENSPPAG00000029523	ENSPPAG00000008002	HS1BP3 (ENSPPAG00000043977) #23	ENSPPAG00000041145 #24	LDAH (ENSPPAG00000016359) #25	APOB (ENSPPAG00000011975) #26	TDRD15 (ENSPPAG00000032970)	ENSPPAG00000025710	KLHL29 (ENSPPAG00000030367)	ATAD2B (ENSPPAG00000033306)	UBXN2A (ENSPPAG00000037849)	MFSD2B (ENSPPAG00000028339)	WDCP (ENSPPAG00000030779)	FKBP1B (ENSPPAG00000035059)	SF3B6 (ENSPPAG00000027816)
Chimpanzee	MODERN SPECIES	14	GEN1 (ENSPTRG00000011678) #9	MSGN1 (ENSPTRG00000011679) #10	KCNS3 (ENSPTRG00000011680) #11	NT5C1B (ENSPTRG00000011681) #12	OSR1 (ENSPTRG00000011683) #13	ENSPTRG00000039202	ENSPTRG00000045822 #14	TTC32 (ENSPTRG00000011685) #15	WDR35 (ENSPTRG00000011686) #16	MATN3 (ENSPTRG00000011689) #17	LAPTM4A (ENSPTRG00000011690) #18	SDC1 (ENSPTRG00000044887) #19	ENSPTRG00000043608	ENSPTRG00000050463	PUM2 (ENSPTRG00000011692) #21	RHOB (ENSPTRG00000046722) #22	ENSPTRG00000052538	ENSPTRG00000016906	HS1BP3 (ENSPTRG00000011696) #23	GDF7 (ENSPTRG00000011697) #24	LDAH (ENSPTRG00000011698) #25	APOB (ENSPTRG00000011699) #26	TDRD15 (ENSPTRG00000024174)	ENSPTRG00000048960	KLHL29 (ENSPTRG00000011701)	ATAD2B (ENSPTRG00000011702)	UBXN2A (ENSPTRG00000011705)	MFSD2B (ENSPTRG00000030551)	WDCP (ENSPTRG00000011707)	FKBP1B (ENSPTRG00000011708)	SF3B6 (ENSPTRG00000011709)
Orangutan	MODERN SPECIES	14	RAD51AP2 (ENSPPYG00000012632)	VSNL1 (ENSPPYG00000012631) #7	SMC6 (ENSPPYG00000012630) #8	GEN1 (ENSPPYG00000012629) #9	MSGN1 (ENSPPYG00000012628) #10	KCNS3 (ENSPPYG00000012627) #11	ENSPPYG00000012626 #12	ENSPPYG00000012624 #13	ENSPPYG00000012623 #15	ENSPPYG00000036668	WDR35 (ENSPPYG00000012622) #16	MATN3 (ENSPPYG00000012621) #17	LAPTM4A (ENSPPYG00000012620) #18	SDC1 (ENSPPYG00000032047) #19	PUM2 (ENSPPYG00000012617) #21	RHOB (ENSPPYG00000012616) #22	HS1BP3 (ENSPPYG00000012615) #23	GDF7 (ENSPPYG00000035678) #24	LDAH (ENSPPYG00000037972) #25	APOB (ENSPPYG00000012612) #26	TDRD15 (ENSPPYG00000031614)	ENSPPYG00000012611	KLHL29 (ENSPPYG00000012610)	ATAD2B (ENSPPYG00000012609)	UBXN2A (ENSPPYG00000012607)	MFSD2B (ENSPPYG00000012606)	WDCP (ENSPPYG00000012605)	FKBP1B (ENSPPYG00000012604)	SF3B6 (ENSPPYG00000036931)	TP53I3 (ENSPPYG00000012602)	ENSPPYG00000041124
Gibbon	MODERN SPECIES	9	MSGN1 (ENSNLEG00000018810) #10	KCNS3 (ENSNLEG00000001834) #11	RDH14 (ENSNLEG00000028221)	NT5C1B (ENSNLEG00000001850) #12	ENSNLEG00000033627	OSR1 (ENSNLEG00000002004) #13	ENSNLEG00000028344 #14	TTC32 (ENSNLEG00000030350) #15	WDR35 (ENSNLEG00000002032) #16	MATN3 (ENSNLEG00000002247) #17	LAPTM4A (ENSNLEG00000002305) #18	SDC1 (ENSNLEG00000031569) #19	ENSNLEG00000029549	ENSNLEG00000002506	PUM2 (ENSNLEG00000002509) #21	RHOB (ENSNLEG00000030179) #22	ENSNLEG00000030630	HS1BP3 (ENSNLEG00000002614) #23	GDF7 (ENSNLEG00000002638) #24	LDAH (ENSNLEG00000032022) #25	APOB (ENSNLEG00000000598) #26	ENSNLEG00000028338	KLHL29 (ENSNLEG00000000686)	ATAD2B (ENSNLEG00000000713)	ENSNLEG00000033640	UBXN2A (ENSNLEG00000000751)	MFSD2B (ENSNLEG00000000769)	WDCP (ENSNLEG00000000787)	FKBP1B (ENSNLEG00000000800)	ENSNLEG00000000815	TP53I3 (ENSNLEG00000000833)
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905.n.a #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Cebidae	ANCESTRAL SPECIES	40	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905.n.a #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905.n.a #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00900000143745	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00950000182926.b.d.c.a.g.a	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Bolivian squirrel monkey	MODERN SPECIES	113	VSNL1 (ENSSBOG00000029668) #7	SMC6 (ENSSBOG00000020240) #8	GEN1 (ENSSBOG00000031046) #9	MSGN1 (ENSSBOG00000010657) #10	KCNS3 (ENSSBOG00000010067) #11	RDH14 (ENSSBOG00000028443)	NT5C1B (ENSSBOG00000030055) #12	ENSSBOG00000023931	OSR1 (ENSSBOG00000023175) #13	TTC32 (ENSSBOG00000024543) #15	WDR35 (ENSSBOG00000030509) #16	MATN3 (ENSSBOG00000027840) #17	LAPTM4A (ENSSBOG00000031549) #18	ENSSBOG00000029288 #19	PUM2 (ENSSBOG00000022007) #21	RHOB (ENSSBOG00000013056) #22	ENSSBOG00000032320	HS1BP3 (ENSSBOG00000023433) #23	GDF7 (ENSSBOG00000022327) #24	LDAH (ENSSBOG00000031409) #25	APOB (ENSSBOG00000008834) #26	KLHL29 (ENSSBOG00000021000)	ATAD2B (ENSSBOG00000032583)	ENSSBOG00000031186	UBXN2A (ENSSBOG00000023884)	MFSD2B (ENSSBOG00000022320)	ENSSBOG00000029165	FKBP1B (ENSSBOG00000020385)	SF3B6 (ENSSBOG00000002914)	TP53I3 (ENSSBOG00000036061)	ENSSBOG00000029308
Capuchin	MODERN SPECIES	1	VSNL1 (ENSCCAG00000027421) #7	SMC6 (ENSCCAG00000027451) #8	GEN1 (ENSCCAG00000031121) #9	MSGN1 (ENSCCAG00000020077) #10	KCNS3 (ENSCCAG00000020195) #11	RDH14 (ENSCCAG00000027491)	NT5C1B (ENSCCAG00000020565) #12	OSR1 (ENSCCAG00000029161) #13	TTC32 (ENSCCAG00000025284) #15	WDR35 (ENSCCAG00000030486) #16	MATN3 (ENSCCAG00000033118) #17	LAPTM4A (ENSCCAG00000029231) #18	ENSCCAG00000019764	SDC1 (ENSCCAG00000031573) #19	PUM2 (ENSCCAG00000037035) #21	RHOB (ENSCCAG00000018485) #22	HS1BP3 (ENSCCAG00000028038) #23	GDF7 (ENSCCAG00000035529) #24	LDAH (ENSCCAG00000033829) #25	APOB (ENSCCAG00000021140) #26	KLHL29 (ENSCCAG00000036850)	ATAD2B (ENSCCAG00000031116)	ENSCCAG00000025817	ENSCCAG00000021209	UBXN2A (ENSCCAG00000025921)	MFSD2B (ENSCCAG00000026318)	WDCP (ENSCCAG00000035342)	FKBP1B (ENSCCAG00000003872)	SF3B6 (ENSCCAG00000036653)	TP53I3 (ENSCCAG00000032310)	PFN4 (ENSCCAG00000028499)
Marmoset	MODERN SPECIES	5	SMC6 (ENSCJAG00000007282) #8	GEN1 (ENSCJAG00000007327) #9	MSGN1 (ENSCJAG00000032633) #10	KCNS3 (ENSCJAG00000007354) #11	NT5C1B (ENSCJAG00000007361) #12	ENSCJAG00000022933	ENSCJAG00000083040	OSR1 (ENSCJAG00000007379) #13	TTC32 (ENSCJAG00000065690) #15	WDR35 (ENSCJAG00000007386) #16	MATN3 (ENSCJAG00000007406) #17	ENSCJAG00000071467 #18	SDC1 (ENSCJAG00000039283) #19	PUM2 (ENSCJAG00000007450) #21	ENSCJAG00000086921	RHOB (ENSCJAG00000077207) #22	ENSCJAG00000022935	HS1BP3 (ENSCJAG00000007517) #23	GDF7 (ENSCJAG00000007529) #24	LDAH (ENSCJAG00000007531) #25	APOB (ENSCJAG00000007533) #26	ENSCJAG00000043360	TDRD15 (ENSCJAG00000007582)	ENSCJAG00000062913	KLHL29 (ENSCJAG00000007588)	ATAD2B (ENSCJAG00000007628)	UBXN2A (ENSCJAG00000007665)	MFSD2B (ENSCJAG00000007691)	WDCP (ENSCJAG00000007696)	ENSCJAG00000083698	SF3B6 (ENSCJAG00000007716)
Mas night monkey	MODERN SPECIES	950													SDC1 (ENSANAG00000032410) #19	ENSANAG00000019275	PUM2 (ENSANAG00000021807) #21	RHOB (ENSANAG00000018114) #22	HS1BP3 (ENSANAG00000028913) #23	GDF7 (ENSANAG00000035417) #24	LDAH (ENSANAG00000022004) #25	ENSANAG00000031943	APOB (ENSANAG00000032282) #26	TDRD15 (ENSANAG00000026523)	ENSANAG00000008532	KLHL29 (ENSANAG00000035261)	ATAD2B (ENSANAG00000024449)	UBXN2A (ENSANAG00000031177)	MFSD2B (ENSANAG00000035631)	WDCP (ENSANAG00000025318)	FKBP1B (ENSANAG00000028933)	SF3B6 (ENSANAG00000027284)	TP53I3 (ENSANAG00000032220)
Tarsier	MODERN SPECIES	6930															ENSTSYG00000036168	RHOB (ENSTSYG00000026775) #22	ENSTSYG00000028509	HS1BP3 (ENSTSYG00000000316) #23
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Lemuriformes_a	ANCESTRAL SPECIES	10	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Coquerels sifaka	MODERN SPECIES	559	CYRIA (ENSPCOG00000021268)	RAD51AP2 (ENSPCOG00000019163)	VSNL1 (ENSPCOG00000003780) #7	SMC6 (ENSPCOG00000028541) #8	GEN1 (ENSPCOG00000022405) #9	KCNS3 (ENSPCOG00000009392) #11	RDH14 (ENSPCOG00000023642)	NT5C1B (ENSPCOG00000000264) #12	OSR1 (ENSPCOG00000024991) #13	ENSPCOG00000015877	TTC32 (ENSPCOG00000028173) #15	MATN3 (ENSPCOG00000020678) #17	LAPTM4A (ENSPCOG00000019008) #18	SDC1 (ENSPCOG00000024117) #19	PUM2 (ENSPCOG00000019636) #21	RHOB (ENSPCOG00000004927) #22	HS1BP3 (ENSPCOG00000016428) #23	GDF7 (ENSPCOG00000020938) #24	LDAH (ENSPCOG00000014577) #25	APOB (ENSPCOG00000021611) #26	TDRD15 (ENSPCOG00000017764)
Mouse lemur	MODERN SPECIES	30	CYRIA (ENSMICG00000013924)	RAD51AP2 (ENSMICG00000038023)	VSNL1 (ENSMICG00000036354) #7	SMC6 (ENSMICG00000010802) #8	GEN1 (ENSMICG00000026479) #9	ENSMICG00000029479 #11	RDH14 (ENSMICG00000033814)	NT5C1B (ENSMICG00000010847) #12	OSR1 (ENSMICG00000004493) #13	ENSMICG00000041804 #15	WDR35 (ENSMICG00000037969) #16	MATN3 (ENSMICG00000032185) #17	LAPTM4A (ENSMICG00000031395) #18	SDC1 (ENSMICG00000041634) #19	PUM2 (ENSMICG00000011647) #21	RHOB (ENSMICG00000029771) #22	HS1BP3 (ENSMICG00000027064) #23	GDF7 (ENSMICG00000044629) #24	LDAH (ENSMICG00000011319) #25	APOB (ENSMICG00000011331) #26	TDRD15 (ENSMICG00000026358)	KLHL29 (ENSMICG00000032037)	ATAD2B (ENSMICG00000003489)	ENSMICG00000030239	ENSMICG00000043253	ENSMICG00000001508	MFSD2B (ENSMICG00000027625)	WDCP (ENSMICG00000001526)	FKBP1B (ENSMICG00000028839)	SF3B6 (ENSMICG00000032874)	TP53I3 (ENSMICG00000001537)
Bushbaby	MODERN SPECIES	137	VSNL1 (ENSOGAG00000030574) #7	SMC6 (ENSOGAG00000004809) #8	GEN1 (ENSOGAG00000004816) #9	MSGN1 (ENSOGAG00000012569) #10	KCNS3 (ENSOGAG00000007336) #11	RDH14 (ENSOGAG00000027061)	NT5C1B (ENSOGAG00000001728) #12	OSR1 (ENSOGAG00000003047) #13	TTC32 (ENSOGAG00000002990) #15	WDR35 (ENSOGAG00000002991) #16	MATN3 (ENSOGAG00000002995) #17	ENSOGAG00000029374	LAPTM4A (ENSOGAG00000003002) #18	SDC1 (ENSOGAG00000010183) #19	PUM2 (ENSOGAG00000002187) #21	RHOB (ENSOGAG00000034489) #22	HS1BP3 (ENSOGAG00000000192) #23	GDF7 (ENSOGAG00000025229) #24	LDAH (ENSOGAG00000000194) #25	APOB (ENSOGAG00000015084) #26	TDRD15 (ENSOGAG00000026095)	KLHL29 (ENSOGAG00000004572)	ATAD2B (ENSOGAG00000004574)	UBXN2A (ENSOGAG00000000025)	MFSD2B (ENSOGAG00000002595)	WDCP (ENSOGAG00000002596)	FKBP1B (ENSOGAG00000029092)	SF3B6 (ENSOGAG00000004468)	TP53I3 (ENSOGAG00000004470)	ENSOGAG00000030458	PFN4 (ENSOGAG00000004473)
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Tree shrew	MODERN SPECIES	2153																RHOB (ENSTBEG00000005585) #22	HS1BP3 (ENSTBEG00000005755) #23	ENSTBEG00000006617	ENSTBEG00000007029 #24	ENSTBEG00000007518 #25
Glires	ANCESTRAL SPECIES	13	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Lagomorpha	ANCESTRAL SPECIES	75	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.h.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Rabbit	MODERN SPECIES	11	GEN1 (ENSOCUG00000027255) #9	MSGN1 (ENSOCUG00000000309) #10	KCNS3 (ENSOCUG00000007365) #11	RDH14 (ENSOCUG00000025332)	NT5C1B (ENSOCUG00000026238) #12	OSR1 (ENSOCUG00000006091) #13	ENSOCUG00000034308	TTC32 (ENSOCUG00000003731) #15	WDR35 (ENSOCUG00000013185) #16	MATN3 (ENSOCUG00000021257) #17	LAPTM4A (ENSOCUG00000026699) #18	SDC1 (ENSOCUG00000025956) #19	ENSOCUG00000032467	PUM2 (ENSOCUG00000017908) #21	ENSOCUG00000025149	RHOB (ENSOCUG00000032265) #22	HS1BP3 (ENSOCUG00000015781) #23	GDF7 (ENSOCUG00000026956) #24	LDAH (ENSOCUG00000015795) #25	APOB (ENSOCUG00000005329) #26	TDRD15 (ENSOCUG00000005346)	KLHL29 (ENSOCUG00000017372)	ATAD2B (ENSOCUG00000005723)	UBXN2A (ENSOCUG00000008783)	ENSOCUG00000008793	WDCP (ENSOCUG00000012562)	FKBP1B (ENSOCUG00000037720)	SF3B6 (ENSOCUG00000022008)	TP53I3 (ENSOCUG00000011212)	ENSOCUG00000015250	FAM228B (ENSOCUG00000023977)
Rodentia	ANCESTRAL SPECIES	15	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Kangaroo rat	MODERN SPECIES	339	Vsnl1 (ENSDORG00000024043) #7	Smc6 (ENSDORG00000010753) #8	Gen1 (ENSDORG00000010754) #9	Msgn1 (ENSDORG00000003509) #10	Kcns3 (ENSDORG00000024097) #11	Rdh14 (ENSDORG00000019712)	Nt5c1b (ENSDORG00000012516) #12	Osr1 (ENSDORG00000000798) #13	Ttc32 (ENSDORG00000029568) #15	Wdr35 (ENSDORG00000014086) #16	Matn3 (ENSDORG00000014087) #17	Laptm4a (ENSDORG00000014089) #18	Sdc1 (ENSDORG00000014605) #19	Pum2 (ENSDORG00000011453) #21	ENSDORG00000027569	Rhob (ENSDORG00000016173) #22	Hs1bp3 (ENSDORG00000005361) #23	Gdf7 (ENSDORG00000010280) #24	Ldah (ENSDORG00000010281) #25	Apob (ENSDORG00000028395) #26	Klhl29 (ENSDORG00000012917)	ENSDORG00000027743	Ubxn2a (ENSDORG00000025740)	Mfsd2b (ENSDORG00000015943)	Wdcp (ENSDORG00000009768)	Fkbp1b (ENSDORG00000025103)	ENSDORG00000009772	ENSDORG00000009773	Pfn4 (ENSDORG00000013388)	Fam228b (ENSDORG00000028363)	Itsn2 (ENSDORG00000004645)
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Lesser Egyptian jerboa	MODERN SPECIES	106	Vsnl1 (ENSJJAG00000011824) #7	Smc6 (ENSJJAG00000010160) #8	Msgn1 (ENSJJAG00000006273) #10	Kcns3 (ENSJJAG00000001486) #11	Rdh14 (ENSJJAG00000023561)	Nt5c1b (ENSJJAG00000021950) #12	Osr1 (ENSJJAG00000022508) #13	ENSJJAG00000014132	Ttc32 (ENSJJAG00000022107) #15	Wdr35 (ENSJJAG00000016508) #16	Matn3 (ENSJJAG00000000252) #17	Laptm4a (ENSJJAG00000000101) #18	Sdc1 (ENSJJAG00000021653) #19	Pum2 (ENSJJAG00000020969) #21	ENSJJAG00000017909	Rhob (ENSJJAG00000013877) #22	ENSJJAG00000017439 #23	Gdf7 (ENSJJAG00000016441) #24	Ldah (ENSJJAG00000015888) #25	ENSJJAG00000007009 #26	ENSJJAG00000004727 #26	ENSJJAG00000003145	Klhl29 (ENSJJAG00000023008)	ENSJJAG00000014110	ENSJJAG00000022603	ENSJJAG00000018968	ENSJJAG00000017291	Ubxn2a (ENSJJAG00000016225)	Mfsd2b (ENSJJAG00000023300)	Wdcp (ENSJJAG00000022685)	ENSJJAG00000022421
Muroidea	ANCESTRAL SPECIES	21	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b	ENSGT00940000155936.b
Chinese hamster chok1gshd	MODERN SPECIES	229	Smc6 (ENSCGRG00001024287) #8	ENSCGRG00001019699 #9	Msgn1 (ENSCGRG00001003369) #10	Kcns3 (ENSCGRG00001004289) #11	ENSCGRG00001006912	Rdh14 (ENSCGRG00001024177)	Nt5c1b (ENSCGRG00001016775) #12	Osr1 (ENSCGRG00001009653) #13	Ttc32 (ENSCGRG00001007763) #15	Wdr35 (ENSCGRG00001004220) #16	Matn3 (ENSCGRG00001025049) #17	Laptm4a (ENSCGRG00001021474) #18	SDC1 (ENSCGRG00001018173) #19	Pum2 (ENSCGRG00001025023) #21	Slc7a15 (ENSCGRG00001018113)	Rhob (ENSCGRG00001001843) #22	Hs1bp3 (ENSCGRG00001015945) #23	ENSCGRG00001012418 #25	Gdf7 (ENSCGRG00001002115) #24	Apob (ENSCGRG00001009990) #26	ENSCGRG00001024983	ENSCGRG00001024957	Klhl29 (ENSCGRG00001018377)	ENSCGRG00001012412	Atad2b (ENSCGRG00001016996)	Ubxn2a (ENSCGRG00001007449)	Mfsd2b (ENSCGRG00001024664)	Wdcp (ENSCGRG00001019012)	Fkbp1b (ENSCGRG00001018564)	Sf3b6 (ENSCGRG00001014595)	ENSCGRG00001011738
Golden Hamster	MODERN SPECIES	705	Rad51ap2 (ENSMAUG00000015167)	Vsnl1 (ENSMAUG00000014300) #7	Smc6 (ENSMAUG00000016007) #8	Msgn1 (ENSMAUG00000016000) #10	Kcns3 (ENSMAUG00000017875) #11	Rdh14 (ENSMAUG00000016192)	Nt5c1b (ENSMAUG00000018395) #12	Osr1 (ENSMAUG00000008188) #13	Ttc32 (ENSMAUG00000018447) #15	Wdr35 (ENSMAUG00000017485) #16	Matn3 (ENSMAUG00000000731) #17	Laptm4a (ENSMAUG00000002092) #18	Sdc1 (ENSMAUG00000007825) #19	Pum2 (ENSMAUG00000000311) #21	Slc7a15 (ENSMAUG00000008328)	Rhob (ENSMAUG00000016245) #22	Hs1bp3 (ENSMAUG00000010929) #23	Gdf7 (ENSMAUG00000011905) #24	Apob (ENSMAUG00000010835) #26	Klhl29 (ENSMAUG00000015607)	ENSMAUG00000016676	Ubxn2a (ENSMAUG00000013894)	Wdcp (ENSMAUG00000013564)	Fkbp1b (ENSMAUG00000016519)	ENSMAUG00000000586	ENSMAUG00000004078	Fam228b (ENSMAUG00000017259)	Fam228a (ENSMAUG00000019010)	Itsn2 (ENSMAUG00000015636)	Ncoa1 (ENSMAUG00000016768)	Ptrhd1 (ENSMAUG00000019251)
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Northern American deer mouse	MODERN SPECIES	14	ENSPEMG00000007987	Kcns3 (ENSPEMG00000011462) #11	ENSPEMG00000025389	ENSPEMG00000000184	Rdh14 (ENSPEMG00000018416)	Nt5c1b (ENSPEMG00000013187) #12	Osr1 (ENSPEMG00000008344) #13	Ttc32 (ENSPEMG00000027871) #15	Wdr35 (ENSPEMG00000004790) #16	Matn3 (ENSPEMG00000017106) #17	Laptm4a (ENSPEMG00000015789) #18	Sdc1 (ENSPEMG00000010998) #19	ENSPEMG00000024635	Pum2 (ENSPEMG00000008357) #21	Slc7a15 (ENSPEMG00000009942)	Rhob (ENSPEMG00000013485) #22	Hs1bp3 (ENSPEMG00000001400) #23	ENSPEMG00000019039 #25	Apob (ENSPEMG00000018913) #26	ENSPEMG00000029395	Klhl29 (ENSPEMG00000012938)	ENSPEMG00000025296	Atad2b (ENSPEMG00000010515)	ENSPEMG00000017582	Mfsd2b (ENSPEMG00000014144)	Wdcp (ENSPEMG00000011326)	Fkbp1b (ENSPEMG00000028047)	Sf3b6 (ENSPEMG00000010308)	ENSPEMG00000009026	Pfn4 (ENSPEMG00000029613)	Fam228b (ENSPEMG00000007380)
Prairie vole	MODERN SPECIES	353	Tacstd2 (ENSMOCG00000008197)	Kcns3 (ENSMOCG00000007505) #11	Rdh14 (ENSMOCG00000005865)	Nt5c1b (ENSMOCG00000020580) #12	ENSMOCG00000013225	Osr1 (ENSMOCG00000012793) #13	ENSMOCG00000007598	Ttc32 (ENSMOCG00000021911) #15	Wdr35 (ENSMOCG00000001393) #16	Matn3 (ENSMOCG00000013872) #17	Laptm4a (ENSMOCG00000013181) #18	ENSMOCG00000012688	Sdc1 (ENSMOCG00000019532) #19	Pum2 (ENSMOCG00000013663) #21	Slc7a15 (ENSMOCG00000003687)	Rhob (ENSMOCG00000007966) #22	Hs1bp3 (ENSMOCG00000022226) #23	ENSMOCG00000021323	Gdf7 (ENSMOCG00000010905) #24	Apob (ENSMOCG00000021753) #26	ENSMOCG00000002216	ENSMOCG00000013271	ENSMOCG00000012724	Klhl29 (ENSMOCG00000007430)	Atad2b (ENSMOCG00000000408)	Ubxn2a (ENSMOCG00000020669)	Mfsd2b (ENSMOCG00000012318)	Wdcp (ENSMOCG00000013612)	Fkbp1b (ENSMOCG00000012542)	ENSMOCG00000013438	Abcg2 (ENSMOCG00000012726)
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Mus	ANCESTRAL SPECIES	10	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
spretus	MODERN SPECIES	3	Vsnl1 (MGP_SPRETEiJ_G0018460) #7	Smc6 (MGP_SPRETEiJ_G0018459) #8	Gen1 (MGP_SPRETEiJ_G0018458) #9	Msgn1 (MGP_SPRETEiJ_G0018457) #10	Kcns3 (MGP_SPRETEiJ_G0018456) #11	Rdh14 (MGP_SPRETEiJ_G0018455)	Nt5c1b (MGP_SPRETEiJ_G0018454) #12	Osr1 (MGP_SPRETEiJ_G0018453) #13	Ttc32 (MGP_SPRETEiJ_G0018452) #15	Wdr35 (MGP_SPRETEiJ_G0018451) #16	Matn3 (MGP_SPRETEiJ_G0018450) #17	MGP_SPRETEiJ_G0018449 #18	Sdc1 (MGP_SPRETEiJ_G0018448) #19	Pum2 (MGP_SPRETEiJ_G0018447) #21	Slc7a15 (MGP_SPRETEiJ_G0018446)	Rhob (MGP_SPRETEiJ_G0018445) #22	Hs1bp3 (MGP_SPRETEiJ_G0018444) #23	Gdf7 (MGP_SPRETEiJ_G0018443) #24	Ldah (MGP_SPRETEiJ_G0018442) #25	Apob (MGP_SPRETEiJ_G0018441) #26	Klhl29 (MGP_SPRETEiJ_G0018440)	Atad2b (MGP_SPRETEiJ_G0018439)	Ubxn2a (MGP_SPRETEiJ_G0018438)	Mfsd2b (MGP_SPRETEiJ_G0018437)	Wdcp (MGP_SPRETEiJ_G0018436)	Fkbp1b (MGP_SPRETEiJ_G0018435)	Sf3b6 (MGP_SPRETEiJ_G0018434)	Pfn4 (MGP_SPRETEiJ_G0018433)	Fam228b (MGP_SPRETEiJ_G0018432)	Fam228a (MGP_SPRETEiJ_G0018431)	MGP_SPRETEiJ_G0018430
Steppe mouse	MODERN SPECIES	153															Slc7a15 (ENSMSIG00000013022)	Rhob (ENSMSIG00000013015) #22
Mouse	MODERN SPECIES	3	Vsnl1 (ENSMUSG00000054459) #7	Smc6 (ENSMUSG00000020608) #8	Gen1 (ENSMUSG00000051235) #9	Msgn1 (ENSMUSG00000047002) #10	Kcns3 (ENSMUSG00000043673) #11	Rdh14 (ENSMUSG00000020621)	Nt5c1b (ENSMUSG00000020622) #12	Osr1 (ENSMUSG00000048387) #13	Ttc32 (ENSMUSG00000066637) #15	Wdr35 (ENSMUSG00000066643) #16	Matn3 (ENSMUSG00000020583) #17	Laptm4a (ENSMUSG00000020585) #18	Sdc1 (ENSMUSG00000020592) #19	Pum2 (ENSMUSG00000020594) #21	Slc7a15 (ENSMUSG00000020600)	Rhob (ENSMUSG00000054364) #22	Hs1bp3 (ENSMUSG00000020605) #23	Gdf7 (ENSMUSG00000037660) #24	Ldah (ENSMUSG00000037669) #25	Apob (ENSMUSG00000020609) #26	Klhl29 (ENSMUSG00000020627)	Atad2b (ENSMUSG00000052812)	Ubxn2a (ENSMUSG00000020634)	Mfsd2b (ENSMUSG00000037336)	Wdcp (ENSMUSG00000051721)	Fkbp1b (ENSMUSG00000020635)	Sf3b6 (ENSMUSG00000037361)	Pfn4 (ENSMUSG00000020639)	Fam228b (ENSMUSG00000050545)	Fam228a (ENSMUSG00000079177)	Itsn2 (ENSMUSG00000020640)
Ryukyu mouse	MODERN SPECIES	3	Gen1 (MGP_CAROLIEiJ_G0017616) #9	Msgn1 (MGP_CAROLIEiJ_G0017615) #10	MGP_CAROLIEiJ_G0017614	Vmn1r200 (MGP_CAROLIEiJ_G0017613)	Kcns3 (MGP_CAROLIEiJ_G0017612) #11	Rdh14 (MGP_CAROLIEiJ_G0017611)	Nt5c1b (MGP_CAROLIEiJ_G0017610) #12	Osr1 (MGP_CAROLIEiJ_G0017609) #13	Ttc32 (MGP_CAROLIEiJ_G0017608) #15	Wdr35 (MGP_CAROLIEiJ_G0017607) #16	Matn3 (MGP_CAROLIEiJ_G0017606) #17	MGP_CAROLIEiJ_G0017605 #18	Sdc1 (MGP_CAROLIEiJ_G0017604) #19	Pum2 (MGP_CAROLIEiJ_G0017603) #21	Slc7a15 (MGP_CAROLIEiJ_G0017602)	Rhob (MGP_CAROLIEiJ_G0017601) #22	Hs1bp3 (MGP_CAROLIEiJ_G0017600) #23	Gdf7 (MGP_CAROLIEiJ_G0017599) #24	Ldah (MGP_CAROLIEiJ_G0017598) #25	Apob (MGP_CAROLIEiJ_G0017597) #26	Klhl29 (MGP_CAROLIEiJ_G0017596)	MGP_CAROLIEiJ_G0017595	MGP_CAROLIEiJ_G0017594	Mfsd2b (MGP_CAROLIEiJ_G0017593)	Wdcp (MGP_CAROLIEiJ_G0017592)	Fkbp1b (MGP_CAROLIEiJ_G0017591)	Sf3b6 (MGP_CAROLIEiJ_G0017590)	Pfn4 (MGP_CAROLIEiJ_G0017589)	Fam228b (MGP_CAROLIEiJ_G0017588)	Fam228a (MGP_CAROLIEiJ_G0017587)	MGP_CAROLIEiJ_G0017586
Shrew mouse	MODERN SPECIES	20	Vsnl1 (MGP_PahariEiJ_G0029374) #7	Smc6 (MGP_PahariEiJ_G0029373) #8	Gen1 (MGP_PahariEiJ_G0029372) #9	Msgn1 (MGP_PahariEiJ_G0029371) #10	Kcns3 (MGP_PahariEiJ_G0029370) #11	Rdh14 (MGP_PahariEiJ_G0029369)	Nt5c1b (MGP_PahariEiJ_G0029368) #12	Osr1 (MGP_PahariEiJ_G0029367) #13	Ttc32 (MGP_PahariEiJ_G0029366) #15	Wdr35 (MGP_PahariEiJ_G0029365) #16	Matn3 (MGP_PahariEiJ_G0029364) #17	MGP_PahariEiJ_G0029363 #18	Sdc1 (MGP_PahariEiJ_G0029362) #19	Pum2 (MGP_PahariEiJ_G0029361) #21	Slc7a15 (MGP_PahariEiJ_G0029360)	Rhob (MGP_PahariEiJ_G0029359) #22	Hs1bp3 (MGP_PahariEiJ_G0029358) #23	Gdf7 (MGP_PahariEiJ_G0029357) #24	Ldah (MGP_PahariEiJ_G0029356) #25	Apob (MGP_PahariEiJ_G0029355) #26	Klhl29 (MGP_PahariEiJ_G0029354)	Atad2b (MGP_PahariEiJ_G0029353)	Ubxn2a (MGP_PahariEiJ_G0029352)	Mfsd2b (MGP_PahariEiJ_G0029351)	Wdcp (MGP_PahariEiJ_G0029350)	Fkbp1b (MGP_PahariEiJ_G0029349)	Sf3b6 (MGP_PahariEiJ_G0029348)	Pfn4 (MGP_PahariEiJ_G0029347)	Fam228b (MGP_PahariEiJ_G0029346)	Fam228a (MGP_PahariEiJ_G0029345)	Itsn2 (MGP_PahariEiJ_G0029344)
Upper Galilee mountains blind mole rat	MODERN SPECIES	935														ENSNGAG00000001718	Slc7a15 (ENSNGAG00000013217)	Rhob (ENSNGAG00000012881) #22	ENSNGAG00000002248 #23	Gdf7 (ENSNGAG00000013061) #24	Ldah (ENSNGAG00000005358) #25
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.h.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b	ENSGT00940000155936.b
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000009816	ENSHGLG00000006546	ENSHGLG00000046615	BUB1 (ENSHGLG00000017666)	BCL2L11 (ENSHGLG00000008457)	ENSHGLG00000035758	ANAPC1 (ENSHGLG00000008271)	MERTK (ENSHGLG00000005187)	ENSHGLG00000050486	ENSHGLG00000013328	FBLN7 (ENSHGLG00000010654)	ZC3H8 (ENSHGLG00000008367)	ENSHGLG00000011882	ENSHGLG00000033390	ENSHGLG00000006049	ENSHGLG00000037423 #22	ENSHGLG00000039633 #23	ENSHGLG00000047860 #23	GDF7 (ENSHGLG00000050774) #24	LDAH (ENSHGLG00000043039) #25	ENSHGLG00000015785	APOB (ENSHGLG00000013850) #26	ENSHGLG00000050959	KLHL29 (ENSHGLG00000011946)	ATAD2B (ENSHGLG00000015927)	ENSHGLG00000049747	MFSD2B (ENSHGLG00000013434)	WDCP (ENSHGLG00000016283)	ENSHGLG00000014590	SF3B6 (ENSHGLG00000014895)	PFN4 (ENSHGLG00000042109)
Hystricomorpha_a	ANCESTRAL SPECIES	31	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b	ENSGT00940000155936.b
Hystricomorpha_b	ANCESTRAL SPECIES	26	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b	ENSGT00940000155936.b
Degu	MODERN SPECIES	60	GEN1 (ENSODEG00000010156) #9	MSGN1 (ENSODEG00000009615) #10	ENSODEG00000019755	KCNS3 (ENSODEG00000009066) #11	RDH14 (ENSODEG00000008458)	NT5C1B (ENSODEG00000008929) #12	OSR1 (ENSODEG00000008728) #13	TTC32 (ENSODEG00000009280) #15	WDR35 (ENSODEG00000012693) #16	MATN3 (ENSODEG00000008451) #17	LAPTM4A (ENSODEG00000008579) #18	SDC1 (ENSODEG00000010758) #19	ENSODEG00000008774	PUM2 (ENSODEG00000007823) #21	ENSODEG00000010362	RHOB (ENSODEG00000019841) #22	HS1BP3 (ENSODEG00000010003) #23	GDF7 (ENSODEG00000008847) #24	ENSODEG00000008523 #25	APOB (ENSODEG00000008337) #26	ENSODEG00000019494	ENSODEG00000007994	ENSODEG00000019450	ENSODEG00000007428	KLHL29 (ENSODEG00000009928)	ENSODEG00000008786	ENSODEG00000009834	ENSODEG00000008643	ENSODEG00000007644	ENSODEG00000007455	ENSODEG00000008882
Long-tailed chinchilla	MODERN SPECIES	176	VSNL1 (ENSCLAG00000011222) #7	SMC6 (ENSCLAG00000012919) #8	GEN1 (ENSCLAG00000008865) #9	MSGN1 (ENSCLAG00000015119) #10	KCNS3 (ENSCLAG00000013937) #11	RDH14 (ENSCLAG00000009341)	NT5C1B (ENSCLAG00000008659) #12	OSR1 (ENSCLAG00000009423) #13	TTC32 (ENSCLAG00000009839) #15	WDR35 (ENSCLAG00000007929) #16	MATN3 (ENSCLAG00000006019) #17	LAPTM4A (ENSCLAG00000006983) #18	SDC1 (ENSCLAG00000007345) #19	PUM2 (ENSCLAG00000006048) #21	ENSCLAG00000005814	RHOB (ENSCLAG00000017801) #22	HS1BP3 (ENSCLAG00000008832) #23	LDAH (ENSCLAG00000011308) #25	APOB (ENSCLAG00000008056) #26	KLHL29 (ENSCLAG00000005598)	ATAD2B (ENSCLAG00000005215)	UBXN2A (ENSCLAG00000014610)	MFSD2B (ENSCLAG00000014189)	WDCP (ENSCLAG00000008275)	FKBP1B (ENSCLAG00000011181)	SF3B6 (ENSCLAG00000014512)	PFN4 (ENSCLAG00000004618)	FAM228B (ENSCLAG00000004984)	ENSCLAG00000005849	ITSN2 (ENSCLAG00000013590)	NCOA1 (ENSCLAG00000012434)
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Eurasian red squirrel	MODERN SPECIES	5	SMC6 (ENSSVLG00005025164) #8	GEN1 (ENSSVLG00005025123) #9	MSGN1 (ENSSVLG00005025107) #10	KCNS3 (ENSSVLG00005025089) #11	ENSSVLG00005025079	RDH14 (ENSSVLG00005025062)	NT5C1B (ENSSVLG00005025002) #12	OSR1 (ENSSVLG00005024914) #13	TTC32 (ENSSVLG00005024889) #15	WDR35 (ENSSVLG00005024826) #16	MATN3 (ENSSVLG00005024711) #17	LAPTM4A (ENSSVLG00005024670) #18	SDC1 (ENSSVLG00005024647) #19	ENSSVLG00005024506 #21	ENSSVLG00005024370	RHOB (ENSSVLG00005024328) #22	HS1BP3 (ENSSVLG00005024304) #23	GDF7 (ENSSVLG00005024288) #24	LDAH (ENSSVLG00005024216) #25	APOB (ENSSVLG00005023994) #26	TDRD15 (ENSSVLG00005023954)	KLHL29 (ENSSVLG00005023916)	ATAD2B (ENSSVLG00005023756)	ENSSVLG00005023695	MFSD2B (ENSSVLG00005023554)	WDCP (ENSSVLG00005023512)	FKBP1B (ENSSVLG00005023436)	ENSSVLG00005023387	TP53I3 (ENSSVLG00005023330)	PFN4 (ENSSVLG00005023293)	FAM228B (ENSSVLG00005023199)
Marmotini	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a.u.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Alpin marmot	MODERN SPECIES	6	SMC6 (ENSMMMG00000022309) #8	GEN1 (ENSMMMG00000022304) #9	MSGN1 (ENSMMMG00000022303) #10	KCNS3 (ENSMMMG00000022292) #11	RDH14 (ENSMMMG00000022280)	ENSMMMG00000022251 #12	OSR1 (ENSMMMG00000022239) #13	TTC32 (ENSMMMG00000022212) #15	WDR35 (ENSMMMG00000022195) #16	MATN3 (ENSMMMG00000022186) #17	LAPTM4A (ENSMMMG00000022160) #18	SDC1 (ENSMMMG00000022131) #19	ENSMMMG00000022129	PUM2 (ENSMMMG00000022116) #21	ENSMMMG00000022089	RHOB (ENSMMMG00000022086) #22	HS1BP3 (ENSMMMG00000022083) #23	LDAH (ENSMMMG00000022060) #25	ENSMMMG00000022059 #26	ENSMMMG00000022049 #26	TDRD15 (ENSMMMG00000022048)	KLHL29 (ENSMMMG00000022005)	ATAD2B (ENSMMMG00000021898)	ENSMMMG00000021893	MFSD2B (ENSMMMG00000021873)	WDCP (ENSMMMG00000021855)	FKBP1B (ENSMMMG00000021830)	TP53I3 (ENSMMMG00000021823)	PFN4 (ENSMMMG00000021805)	FAM228B (ENSMMMG00000021792)	ENSMMMG00000021782
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a.u.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a.g	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	93	SMC6 (ENSSTOG00000013946) #8	GEN1 (ENSSTOG00000013963) #9	MSGN1 (ENSSTOG00000013981) #10	KCNS3 (ENSSTOG00000012420) #11	RDH14 (ENSSTOG00000021114)	NT5C1B (ENSSTOG00000014834) #12	OSR1 (ENSSTOG00000015454) #13	TTC32 (ENSSTOG00000007140) #15	WDR35 (ENSSTOG00000007151) #16	MATN3 (ENSSTOG00000019530) #17	ENSSTOG00000007214 #18	SDC1 (ENSSTOG00000028519) #19	ENSSTOG00000033291	PUM2 (ENSSTOG00000006262) #21	ENSSTOG00000023326	ENSSTOG00000014644 #22	HS1BP3 (ENSSTOG00000004973) #23	GDF7 (ENSSTOG00000027110) #24	LDAH (ENSSTOG00000026882) #25	APOB (ENSSTOG00000027598) #26	TDRD15 (ENSSTOG00000027567)	ENSSTOG00000033132 #18	KLHL29 (ENSSTOG00000008403)	ATAD2B (ENSSTOG00000021066)	UBXN2A (ENSSTOG00000030412)	MFSD2B (ENSSTOG00000003123)	WDCP (ENSSTOG00000032257)	FKBP1B (ENSSTOG00000034202)	SF3B6 (ENSSTOG00000027077)	TP53I3 (ENSSTOG00000003142)	PFN4 (ENSSTOG00000003151)
Squirrel	MODERN SPECIES	71	CLN6 (ENSSTOG00000015540)	FEM1B (ENSSTOG00000015544)	ITGA11 (ENSSTOG00000015545)	CORO2B (ENSSTOG00000015918)	ENSSTOG00000015929	GLCE (ENSSTOG00000019509)	PAQR5 (ENSSTOG00000000507)	KIF23 (ENSSTOG00000022809)	RPLP1 (ENSSTOG00000027893)	TLE3 (ENSSTOG00000000531)	UACA (ENSSTOG00000024719)	LARP6 (ENSSTOG00000024279)	LRRC49 (ENSSTOG00000000941)	THSD4 (ENSSTOG00000027069)	NR2E3 (ENSSTOG00000012080)	ENSSTOG00000020463 #22	MYO9A (ENSSTOG00000013284)	ENSSTOG00000032735	SENP8 (ENSSTOG00000012663)	GRAMD2A (ENSSTOG00000009505)	PKM (ENSSTOG00000008167)	PARP6 (ENSSTOG00000008186)	CELF6 (ENSSTOG00000019540)	HEXA (ENSSTOG00000033336)	ENSSTOG00000013434	ARIH1 (ENSSTOG00000026001)	BBS4 (ENSSTOG00000012246)	ADPGK (ENSSTOG00000012259)	NEO1 (ENSSTOG00000012264)	HCN4 (ENSSTOG00000012286)	ENSSTOG00000034860
Arctic ground squirrel	MODERN SPECIES		SMC6 (ENSUPAG00010009564) #8	GEN1 (ENSUPAG00010009557) #9	MSGN1 (ENSUPAG00010009556) #10	RDH14 (ENSUPAG00010009546)	ENSUPAG00010009474 #12	OSR1 (ENSUPAG00010009451) #13	TTC32 (ENSUPAG00010009436) #15	WDR35 (ENSUPAG00010009354) #16	MATN3 (ENSUPAG00010009339) #17	LAPTM4A (ENSUPAG00010009333) #18	SDC1 (ENSUPAG00010009310) #19	ENSUPAG00010009303	ENSUPAG00010009301	PUM2 (ENSUPAG00010009123) #21	ENSUPAG00010009092	RHOB (ENSUPAG00010009084) #22	HS1BP3 (ENSUPAG00010009063) #23	ENSUPAG00010009055 #24	ENSUPAG00010009042 #24	LDAH (ENSUPAG00010009007) #25	APOB (ENSUPAG00010008961) #26	TDRD15 (ENSUPAG00010008953)	ENSUPAG00010008883	KLHL29 (ENSUPAG00010008812)	ATAD2B (ENSUPAG00010008759)	UBXN2A (ENSUPAG00010008734)	MFSD2B (ENSUPAG00010008700)	WDCP (ENSUPAG00010008689)	FKBP1B (ENSUPAG00010008674)	SF3B6 (ENSUPAG00010008671)	ENSUPAG00010008668
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Suina	ANCESTRAL SPECIES	13	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Pig	MODERN SPECIES	11	ENSSSCG00000040752	KCNS3 (ENSSSCG00000031905) #11	RDH14 (ENSSSCG00000008608)	NT5C1B (ENSSSCG00000008607) #12	ENSSSCG00000054495	OSR1 (ENSSSCG00000060496) #13	ENSSSCG00000058710	TTC32 (ENSSSCG00000053616) #15	WDR35 (ENSSSCG00000008604) #16	MATN3 (ENSSSCG00000008603) #17	LAPTM4A (ENSSSCG00000008602) #18	SDC1 (ENSSSCG00000008601) #19	PUM2 (ENSSSCG00000008600) #21	ENSSSCG00000054581	ENSSSCG00000008599	RHOB (ENSSSCG00000043781) #22	HS1BP3 (ENSSSCG00000030115) #23	GDF7 (ENSSSCG00000028931) #24	LDAH (ENSSSCG00000025357) #25	APOB (ENSSSCG00000008595) #26	ENSSSCG00000048838	ENSSSCG00000039066	ENSSSCG00000044002	KLHL29 (ENSSSCG00000008593)	ENSSSCG00000055154	ATAD2B (ENSSSCG00000008591)	ENSSSCG00000041783	UBXN2A (ENSSSCG00000033753)	MFSD2B (ENSSSCG00000008590)	WDCP (ENSSSCG00000008589)	FKBP1B (ENSSSCG00000045531)
Chacoan peccary	MODERN SPECIES	776	VSNL1 (ENSCWAG00000016143) #7	SMC6 (ENSCWAG00000016171) #8	GEN1 (ENSCWAG00000016234) #9	MSGN1 (ENSCWAG00000016325) #10	KCNS3 (ENSCWAG00000016339) #11	RDH14 (ENSCWAG00000016353)	NT5C1B (ENSCWAG00000016386) #12	OSR1 (ENSCWAG00000016456) #13	TTC32 (ENSCWAG00000016481) #15	WDR35 (ENSCWAG00000016523) #16	MATN3 (ENSCWAG00000016742) #17	LAPTM4A (ENSCWAG00000016902) #18	SDC1 (ENSCWAG00000016920) #19	PUM2 (ENSCWAG00000003696) #21	ENSCWAG00000003897	RHOB (ENSCWAG00000004001) #22	HS1BP3 (ENSCWAG00000004014) #23	GDF7 (ENSCWAG00000004046) #24	LDAH (ENSCWAG00000004087) #25	APOB (ENSCWAG00000004185) #26	KLHL29 (ENSCWAG00000004442)	ATAD2B (ENSCWAG00000004481)	UBXN2A (ENSCWAG00000004513)	MFSD2B (ENSCWAG00000004534)	WDCP (ENSCWAG00000004635)	FKBP1B (ENSCWAG00000004665)	SF3B6 (ENSCWAG00000004714)	TP53I3 (ENSCWAG00000004737)	PFN4 (ENSCWAG00000004758)	FAM228B (ENSCWAG00000004823)	ENSCWAG00000004843
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Camelidae	ANCESTRAL SPECIES	12	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT01090000263460	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Arabian camel	MODERN SPECIES	6	SMC6 (ENSCDRG00005004835) #8	GEN1 (ENSCDRG00005004909) #9	MSGN1 (ENSCDRG00005004972) #10	KCNS3 (ENSCDRG00005004986) #11	RDH14 (ENSCDRG00005004999)	NT5C1B (ENSCDRG00005005015) #12	OSR1 (ENSCDRG00005005052) #13	TTC32 (ENSCDRG00005005072) #15	ENSCDRG00005005097 #16	MATN3 (ENSCDRG00005005117) #17	LAPTM4A (ENSCDRG00005005142) #18	ENSCDRG00005005168	SDC1 (ENSCDRG00005005384) #19	ENSCDRG00005005424	PUM2 (ENSCDRG00005005454) #21	RHOB (ENSCDRG00005005629) #22	HS1BP3 (ENSCDRG00005005637) #23	LDAH (ENSCDRG00005005753) #25	ENSCDRG00005005813	APOB (ENSCDRG00005005937) #26	TDRD15 (ENSCDRG00005007436)	ENSCDRG00005007452	ENSCDRG00005007461	KLHL29 (ENSCDRG00005007511)	ATAD2B (ENSCDRG00005007580)	UBXN2A (ENSCDRG00005007692)	MFSD2B (ENSCDRG00005007767)	WDCP (ENSCDRG00005007980)	FKBP1B (ENSCDRG00005008005)	SF3B6 (ENSCDRG00005008085)	TP53I3 (ENSCDRG00005008122)
Alpaca	MODERN SPECIES	5188																RHOB (ENSVPAG00000009796) #22
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Pecora	ANCESTRAL SPECIES	5	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT01010000230154	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908
Yarkand deer	MODERN SPECIES	2	SMC6 (ENSCHYG00000007159) #8	GEN1 (ENSCHYG00000007066) #9	MSGN1 (ENSCHYG00000007045) #10	KCNS3 (ENSCHYG00000007031) #11	RDH14 (ENSCHYG00000007014)	NT5C1B (ENSCHYG00000006961) #12	ENSCHYG00000006946	OSR1 (ENSCHYG00000006938) #13	TTC32 (ENSCHYG00000006877) #15	WDR35 (ENSCHYG00000006261) #16	MATN3 (ENSCHYG00000006044) #17	LAPTM4A (ENSCHYG00000005989) #18	SDC1 (ENSCHYG00000005966) #19	PUM2 (ENSCHYG00000005651) #21	ENSCHYG00000005597	RHOB (ENSCHYG00000005587) #22	HS1BP3 (ENSCHYG00000005568) #23	GDF7 (ENSCHYG00000005551) #24	ENSCHYG00000005540	LDAH (ENSCHYG00000017844) #25	APOB (ENSCHYG00000017558) #26	TDRD15 (ENSCHYG00000017505)	ENSCHYG00000017476	KLHL29 (ENSCHYG00000017090)	ATAD2B (ENSCHYG00000016580)	ENSCHYG00000016517	MFSD2B (ENSCHYG00000016413)	WDCP (ENSCHYG00000016368)	FKBP1B (ENSCHYG00000016279)	TP53I3 (ENSCHYG00000016071)	PFN4 (ENSCHYG00000015825)
Percora_a	ANCESTRAL SPECIES	13	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT01010000230154	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908
Siberian musk deer	MODERN SPECIES	239	GEN1 (ENSMMSG00000002401) #9	MSGN1 (ENSMMSG00000002419) #10	KCNS3 (ENSMMSG00000002436) #11	RDH14 (ENSMMSG00000002449)	NT5C1B (ENSMMSG00000002465) #12	OSR1 (ENSMMSG00000002491) #13	TTC32 (ENSMMSG00000002503) #15	WDR35 (ENSMMSG00000002532) #16	ENSMMSG00000002584	MATN3 (ENSMMSG00000002615) #17	LAPTM4A (ENSMMSG00000002657) #18	ENSMMSG00000002671	SDC1 (ENSMMSG00000002684) #19	PUM2 (ENSMMSG00000002715) #21	ENSMMSG00000002810	RHOB (ENSMMSG00000002823) #22	HS1BP3 (ENSMMSG00000002840) #23	GDF7 (ENSMMSG00000002860) #24	ENSMMSG00000002886 #25	ENSMMSG00000003002	APOB (ENSMMSG00000003055) #26	TDRD15 (ENSMMSG00000003160)	ENSMMSG00000003169
Bovidae	ANCESTRAL SPECIES	5	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT01010000230154	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908
Caprinae	ANCESTRAL SPECIES	9	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT01010000230154	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908
Rambouillet Sheep	MODERN SPECIES	19	FAM49A (ENSOARG00020016491)	RAD51AP2 (ENSOARG00020016789)	VSNL1 (ENSOARG00020016837) #7	SMC6 (ENSOARG00020016887) #8	MSGN1 (ENSOARG00020017429) #10	KCNS3 (ENSOARG00020017454) #11	RDH14 (ENSOARG00020017495)	NT5C1B (ENSOARG00020017529) #12	OSR1 (ENSOARG00020017609) #13	TTC32 (ENSOARG00020017652) #15	WDR35 (ENSOARG00020017694) #16	MATN3 (ENSOARG00020018018) #17	LAPTM4A (ENSOARG00020018198) #18	SDC1 (ENSOARG00020018247) #19	PUM2 (ENSOARG00020018298) #21	RHOB (ENSOARG00020018495) #22	HS1BP3 (ENSOARG00020018571) #23	GDF7 (ENSOARG00020018622) #24	LDAH (ENSOARG00020018657) #25	ENSOARG00020018924	ENSOARG00020018981 #26	TDRD15 (ENSOARG00020019143)	ENSOARG00020019194	ENSOARG00020019210	KLHL29 (ENSOARG00020019264)	ATAD2B (ENSOARG00020019344)	ENSOARG00020019629	UBXN2A (ENSOARG00020019662)	MFSD2B (ENSOARG00020019757)	FKBP1B (ENSOARG00020019964)	SF3B6 (ENSOARG00020020043)
Goat	MODERN SPECIES	2	SMC6 (ENSCHIG00000010144) #8	GEN1 (ENSCHIG00000013888) #9	MSGN1 (ENSCHIG00000010365) #10	KCNS3 (ENSCHIG00000012986) #11	ENSCHIG00000027201	NT5C1B (ENSCHIG00000026605) #12	OSR1 (ENSCHIG00000020202) #13	TTC32 (ENSCHIG00000025091) #15	WDR35 (ENSCHIG00000006588) #16	MATN3 (ENSCHIG00000018061) #17	LAPTM4A (ENSCHIG00000022265) #18	SDC1 (ENSCHIG00000018782) #19	ENSCHIG00000025915	PUM2 (ENSCHIG00000022180) #21	ENSCHIG00000018368	RHOB (ENSCHIG00000012713) #22	HS1BP3 (ENSCHIG00000026302) #23	GDF7 (ENSCHIG00000011381) #24	ENSCHIG00000024630	LDAH (ENSCHIG00000013047) #25	APOB (ENSCHIG00000016651) #26	TDRD15 (ENSCHIG00000024751)	ENSCHIG00000013040	KLHL29 (ENSCHIG00000021081)	ATAD2B (ENSCHIG00000016699)	UBXN2A (ENSCHIG00000008772)	MFSD2B (ENSCHIG00000015093)	WDCP (ENSCHIG00000017430)	FKBP1B (ENSCHIG00000025133)	SF3B6 (ENSCHIG00000009902)	TP53I3 (ENSCHIG00000007693)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181.e	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.s.a	ENSGT00940000161217
American bison	MODERN SPECIES	3068	VSNL1 (ENSBBBG00000005304) #7	SMC6 (ENSBBBG00000019549) #8	GEN1 (ENSBBBG00000005250) #9	MSGN1 (ENSBBBG00000005230) #10	KCNS3 (ENSBBBG00000019452) #11	ENSBBBG00000019450	NT5C1B (ENSBBBG00000009192) #12	OSR1 (ENSBBBG00000019430) #13	TTC32 (ENSBBBG00000006785) #15	WDR35 (ENSBBBG00000007319) #16	MATN3 (ENSBBBG00000019335) #17	LAPTM4A (ENSBBBG00000007183) #18	SDC1 (ENSBBBG00000009171) #19	PUM2 (ENSBBBG00000019297) #21	ENSBBBG00000019228	RHOB (ENSBBBG00000019223) #22	HS1BP3 (ENSBBBG00000019208) #23	LDAH (ENSBBBG00000019145) #25	APOB (ENSBBBG00000019104) #26	TDRD15 (ENSBBBG00000004866)	ENSBBBG00000004865	ENSBBBG00000004864	KLHL29 (ENSBBBG00000019026)	ATAD2B (ENSBBBG00000018952)	UBXN2A (ENSBBBG00000018929)	MFSD2B (ENSBBBG00000004782)	WDCP (ENSBBBG00000018782)	FKBP1B (ENSBBBG00000004715)	ENSBBBG00000018761	TP53I3 (ENSBBBG00000018749)	PFN4 (ENSBBBG00000018737)
Bos	ANCESTRAL SPECIES	5	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181.e	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000074784.a.b	ENSGT01030000234916.g.a	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b
Bos_b	ANCESTRAL SPECIES	16	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181.e	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.b.b	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000074784.a.b	ENSGT01030000234916.g.a.a	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.s.a
Hybrid Bos Indicus	MODERN SPECIES	2	SMC6 (ENSBIXG00005004235) #8	GEN1 (ENSBIXG00005024882) #9	MSGN1 (ENSBIXG00005024894) #10	KCNS3 (ENSBIXG00005024916) #11	RDH14 (ENSBIXG00005024953)	NT5C1B (ENSBIXG00005025000) #12	ENSBIXG00005025042 #13	TTC32 (ENSBIXG00005025110) #15	WDR35 (ENSBIXG00005025304) #16	MATN3 (ENSBIXG00005006070) #17	ENSBIXG00005025414	LAPTM4A (ENSBIXG00005025436) #18	SDC1 (ENSBIXG00005004335) #19	PUM2 (ENSBIXG00005004375) #21	ENSBIXG00005025762	RHOB (ENSBIXG00005004398) #22	HS1BP3 (ENSBIXG00005025838) #23	GDF7 (ENSBIXG00005025857) #24	LDAH (ENSBIXG00005026010) #25	APOB (ENSBIXG00005006700) #26	TDRD15 (ENSBIXG00005026149)	ENSBIXG00005026182	ENSBIXG00005005602	ENSBIXG00005026241	ENSBIXG00005026267	KLHL29 (ENSBIXG00005004508)	ENSBIXG00005026418	ATAD2B (ENSBIXG00005026503)	UBXN2A (ENSBIXG00005026562)	MFSD2B (ENSBIXG00005026634)	WDCP (ENSBIXG00005026653)
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181.e	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00550000074784.a.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00930000152728.b.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.t
Wild yak	MODERN SPECIES	752							NT5C1B (ENSBMUG00000005486) #12	OSR1 (ENSBMUG00000005507) #13	ENSBMUG00000005524	WDR35 (ENSBMUG00000005571) #16	MATN3 (ENSBMUG00000005603) #17	LAPTM4A (ENSBMUG00000005607) #18	SDC1 (ENSBMUG00000005608) #19	PUM2 (ENSBMUG00000005650) #21	ENSBMUG00000005710	RHOB (ENSBMUG00000005721) #22	HS1BP3 (ENSBMUG00000005770) #23	LDAH (ENSBMUG00000005822) #25	APOB (ENSBMUG00000005903) #26	TDRD15 (ENSBMUG00000005920)	ENSBMUG00000005934	ENSBMUG00000005946	ENSBMUG00000005951	ENSBMUG00000005963	KLHL29 (ENSBMUG00000005980)	ATAD2B (ENSBMUG00000006045)	UBXN2A (ENSBMUG00000006075)	MFSD2B (ENSBMUG00000006096)	WDCP (ENSBMUG00000006107)	FKBP1B (ENSBMUG00000006132)	ENSBMUG00000006141
Domestic yak	DUPLICATION
Domestic yak	MODERN SPECIES	28	VSNL1 (ENSBGRG00000022276) #7	SMC6 (ENSBGRG00000022073) #8	GEN1 (ENSBGRG00000022034) #9	MSGN1 (ENSBGRG00000022021) #10	KCNS3 (ENSBGRG00000022008) #11	ENSBGRG00000021977	NT5C1B (ENSBGRG00000021877) #12	OSR1 (ENSBGRG00000021840) #13	ENSBGRG00000021825	TTC32 (ENSBGRG00000021780) #15	WDR35 (ENSBGRG00000020967) #16	MATN3 (ENSBGRG00000020733) #17	SDC1 (ENSBGRG00000020622) #19	PUM2 (ENSBGRG00000020491) #21	ENSBGRG00000020441	ENSBGRG00000020423 #22	RHOB (ENSBGRG00000020410) #22	HS1BP3 (ENSBGRG00000020332) #23	GDF7 (ENSBGRG00000020284) #24	LDAH (ENSBGRG00000020053) #25	ENSBGRG00000019965 #26	TDRD15 (ENSBGRG00000019929)	ENSBGRG00000019916	KLHL29 (ENSBGRG00000019818)	ATAD2B (ENSBGRG00000019718)	UBXN2A (ENSBGRG00000019653)	MFSD2B (ENSBGRG00000019458)	WDCP (ENSBGRG00000019427)	FKBP1B (ENSBGRG00000019279)	TP53I3 (ENSBGRG00000019116)	PFN4 (ENSBGRG00000019061)
Domestic yak	MODERN SPECIES	28	SMC6 (ENSBGRG00000022073) #8	GEN1 (ENSBGRG00000022034) #9	MSGN1 (ENSBGRG00000022021) #10	KCNS3 (ENSBGRG00000022008) #11	ENSBGRG00000021977	NT5C1B (ENSBGRG00000021877) #12	OSR1 (ENSBGRG00000021840) #13	ENSBGRG00000021825	TTC32 (ENSBGRG00000021780) #15	WDR35 (ENSBGRG00000020967) #16	MATN3 (ENSBGRG00000020733) #17	SDC1 (ENSBGRG00000020622) #19	PUM2 (ENSBGRG00000020491) #21	ENSBGRG00000020441	ENSBGRG00000020423 #22	RHOB (ENSBGRG00000020410) #22	HS1BP3 (ENSBGRG00000020332) #23	GDF7 (ENSBGRG00000020284) #24	LDAH (ENSBGRG00000020053) #25	ENSBGRG00000019965 #26	TDRD15 (ENSBGRG00000019929)	ENSBGRG00000019916	KLHL29 (ENSBGRG00000019818)	ATAD2B (ENSBGRG00000019718)	UBXN2A (ENSBGRG00000019653)	MFSD2B (ENSBGRG00000019458)	WDCP (ENSBGRG00000019427)	FKBP1B (ENSBGRG00000019279)	TP53I3 (ENSBGRG00000019116)	PFN4 (ENSBGRG00000019061)	FAM228B (ENSBGRG00000019019)
Cetacea	ANCESTRAL SPECIES	16	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Blue whale	MODERN SPECIES	4	ENSBMSG00010014894	SMC6 (ENSBMSG00010014555) #8	ENSBMSG00010014350 #9	MSGN1 (ENSBMSG00010014319) #10	KCNS3 (ENSBMSG00010014305) #11	RDH14 (ENSBMSG00010014286)	NT5C1B (ENSBMSG00010014150) #12	OSR1 (ENSBMSG00010014098) #13	TTC32 (ENSBMSG00010014051) #15	WDR35 (ENSBMSG00010013819) #16	MATN3 (ENSBMSG00010013735) #17	LAPTM4A (ENSBMSG00010013698) #18	SDC1 (ENSBMSG00010013669) #19	ENSBMSG00010013651	PUM2 (ENSBMSG00010013534) #21	RHOB (ENSBMSG00010013496) #22	HS1BP3 (ENSBMSG00010013470) #23	GDF7 (ENSBMSG00010013453) #24	LDAH (ENSBMSG00010013418) #25	ENSBMSG00010013370 #26	ENSBMSG00010013332	KLHL29 (ENSBMSG00010013307)	ATAD2B (ENSBMSG00010013251)	ENSBMSG00010013222	UBXN2A (ENSBMSG00010013209)	MFSD2B (ENSBMSG00010013171)	WDCP (ENSBMSG00010013158)	FKBP1B (ENSBMSG00010013149)	SF3B6 (ENSBMSG00010013141)	TP53I3 (ENSBMSG00010013124)	ENSBMSG00010013113
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Sperm whale	MODERN SPECIES	3	ENSPCTG00005015400	FAM49A (ENSPCTG00005015455)	RAD51AP2 (ENSPCTG00005015523)	VSNL1 (ENSPCTG00005015591) #7	SMC6 (ENSPCTG00005015640) #8	GEN1 (ENSPCTG00005015707) #9	MSGN1 (ENSPCTG00005015740) #10	KCNS3 (ENSPCTG00005015770) #11	RDH14 (ENSPCTG00005015784)	NT5C1B (ENSPCTG00005015828) #12	WDR35 (ENSPCTG00005016075) #16	MATN3 (ENSPCTG00005016290) #17	LAPTM4A (ENSPCTG00005016508) #18	ENSPCTG00005016545	PUM2 (ENSPCTG00005016650) #21	RHOB (ENSPCTG00005016876) #22	ENSPCTG00005016911 #23	GDF7 (ENSPCTG00005016929) #24	LDAH (ENSPCTG00005016984) #25	KLHL29 (ENSPCTG00005017130)	ATAD2B (ENSPCTG00005017541)	UBXN2A (ENSPCTG00005017638)	MFSD2B (ENSPCTG00005017691)	WDCP (ENSPCTG00005017956)	FKBP1B (ENSPCTG00005017988)	SF3B6 (ENSPCTG00005018047)	FAM228B (ENSPCTG00005018071)	PFN4 (ENSPCTG00005018269)	ITSN2 (ENSPCTG00005018639)	NCOA1 (ENSPCTG00005020989)	ENSPCTG00005021078
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Dolphin	MODERN SPECIES	5299																RHOB (ENSTTRG00000005690) #22
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Vaquita	MODERN SPECIES	4	RAD51AP2 (ENSPSNG00000005244)	VSNL1 (ENSPSNG00000005265) #7	SMC6 (ENSPSNG00000005297) #8	GEN1 (ENSPSNG00000005368) #9	MSGN1 (ENSPSNG00000005383) #10	KCNS3 (ENSPSNG00000005395) #11	RDH14 (ENSPSNG00000005407)	NT5C1B (ENSPSNG00000005430) #12	OSR1 (ENSPSNG00000005478) #13	TTC32 (ENSPSNG00000005497) #15	WDR35 (ENSPSNG00000005538) #16	MATN3 (ENSPSNG00000005606) #17	LAPTM4A (ENSPSNG00000005648) #18	SDC1 (ENSPSNG00000005664) #19	PUM2 (ENSPSNG00000005720) #21	RHOB (ENSPSNG00000005853) #22	HS1BP3 (ENSPSNG00000005889) #23	GDF7 (ENSPSNG00000005912) #24	LDAH (ENSPSNG00000005977) #25	APOB (ENSPSNG00000006093) #26	KLHL29 (ENSPSNG00000006365)	ATAD2B (ENSPSNG00000006447)	UBXN2A (ENSPSNG00000006489)	MFSD2B (ENSPSNG00000006537)	WDCP (ENSPSNG00000006641)	FKBP1B (ENSPSNG00000006673)	SF3B6 (ENSPSNG00000006711)	TP53I3 (ENSPSNG00000006747)	FAM228B (ENSPSNG00000006789)	PFN4 (ENSPSNG00000006828)	ENSPSNG00000006856
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00470000042500	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Beluga whale	MODERN SPECIES	37	VSNL1 (ENSDLEG00000003903) #7	SMC6 (ENSDLEG00000003874) #8	GEN1 (ENSDLEG00000003850) #9	MSGN1 (ENSDLEG00000003842) #10	KCNS3 (ENSDLEG00000003837) #11	RDH14 (ENSDLEG00000003827)	NT5C1B (ENSDLEG00000003811) #12	OSR1 (ENSDLEG00000003804) #13	ENSDLEG00000003800	TTC32 (ENSDLEG00000003795) #15	WDR35 (ENSDLEG00000003761) #16	MATN3 (ENSDLEG00000003741) #17	LAPTM4A (ENSDLEG00000003732) #18	SDC1 (ENSDLEG00000003726) #19	PUM2 (ENSDLEG00000003713) #21	RHOB (ENSDLEG00000003706) #22	HS1BP3 (ENSDLEG00000003696) #23	GDF7 (ENSDLEG00000003664) #24	LDAH (ENSDLEG00000003656) #25	APOB (ENSDLEG00000003485) #26	KLHL29 (ENSDLEG00000003396)	ENSDLEG00000003376	ENSDLEG00000003368	UBXN2A (ENSDLEG00000003355)	MFSD2B (ENSDLEG00000003286)	WDCP (ENSDLEG00000003277)	FKBP1B (ENSDLEG00000003261)	SF3B6 (ENSDLEG00000003252)	TP53I3 (ENSDLEG00000003236)	PFN4 (ENSDLEG00000003231)	FAM228B (ENSDLEG00000003177)
Narwhal	MODERN SPECIES	305	RAD51AP2 (ENSMMNG00015005739)	VSNL1 (ENSMMNG00015005727) #7	SMC6 (ENSMMNG00015005666) #8	GEN1 (ENSMMNG00015005619) #9	MSGN1 (ENSMMNG00015005600) #10	KCNS3 (ENSMMNG00015005585) #11	RDH14 (ENSMMNG00015005575)	NT5C1B (ENSMMNG00015005540) #12	OSR1 (ENSMMNG00015005525) #13	TTC32 (ENSMMNG00015005504) #15	WDR35 (ENSMMNG00015005480) #16	MATN3 (ENSMMNG00015005436) #17	LAPTM4A (ENSMMNG00015005414) #18	SDC1 (ENSMMNG00015005397) #19	PUM2 (ENSMMNG00015008879) #21	RHOB (ENSMMNG00015008862) #22	HS1BP3 (ENSMMNG00015008848) #23	GDF7 (ENSMMNG00015008839) #24	LDAH (ENSMMNG00015008820) #25	APOB (ENSMMNG00015008780) #26	KLHL29 (ENSMMNG00015008756)	ATAD2B (ENSMMNG00015008735)	UBXN2A (ENSMMNG00015008718)	MFSD2B (ENSMMNG00015008694)	WDCP (ENSMMNG00015008672)	FKBP1B (ENSMMNG00015008655)	SF3B6 (ENSMMNG00015008636)	TP53I3 (ENSMMNG00015008625)	PFN4 (ENSMMNG00015008611)	FAM228B (ENSMMNG00015008593)	ENSMMNG00015008570
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Equus	ANCESTRAL SPECIES	7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT01090000263317.a	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT01100000265002	ENSGT00940000170401	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217
Horse	MODERN SPECIES	6	SMC6 (ENSECAG00000022265) #8	GEN1 (ENSECAG00000020295) #9	MSGN1 (ENSECAG00000002724) #10	KCNS3 (ENSECAG00000019779) #11	RDH14 (ENSECAG00000045905)	NT5C1B (ENSECAG00000014033) #12	OSR1 (ENSECAG00000013593) #13	TTC32 (ENSECAG00000013048) #15	WDR35 (ENSECAG00000018258) #16	MATN3 (ENSECAG00000017085) #17	SDC1 (ENSECAG00000014709) #19	ENSECAG00000045674	PUM2 (ENSECAG00000021930) #21	ENSECAG00000021922	ENSECAG00000032315	RHOB (ENSECAG00000051165) #22	HS1BP3 (ENSECAG00000021502) #23	GDF7 (ENSECAG00000021083) #24	ENSECAG00000058266	LDAH (ENSECAG00000020412) #25	APOB (ENSECAG00000008600) #26	TDRD15 (ENSECAG00000008581)	ENSECAG00000034152	ENSECAG00000032306	ENSECAG00000038636	ENSECAG00000033565	ENSECAG00000046858	KLHL29 (ENSECAG00000007032)	ATAD2B (ENSECAG00000023573)	ENSECAG00000002550	UBXN2A (ENSECAG00000020144)
Donkey	MODERN SPECIES	26	SMC6 (ENSEASG00005009355) #8	GEN1 (ENSEASG00005023619) #9	MSGN1 (ENSEASG00005009364) #10	KCNS3 (ENSEASG00005009368) #11	RDH14 (ENSEASG00005029880)	NT5C1B (ENSEASG00005009376) #12	OSR1 (ENSEASG00005009388) #13	TTC32 (ENSEASG00005026368) #15	WDR35 (ENSEASG00005009400) #16	MATN3 (ENSEASG00005009408) #17	LAPTM4A (ENSEASG00005009414) #18	SDC1 (ENSEASG00005009418) #19	PUM2 (ENSEASG00005009429) #21	ENSEASG00005009442	ENSEASG00005027331	RHOB (ENSEASG00005009448) #22	HS1BP3 (ENSEASG00005009454) #23	GDF7 (ENSEASG00005009457) #24	LDAH (ENSEASG00005009459) #25	APOB (ENSEASG00005009466) #26	TDRD15 (ENSEASG00005034301)	ENSEASG00005009474	ENSEASG00005009477	ENSEASG00005009479	KLHL29 (ENSEASG00005009482)	ATAD2B (ENSEASG00005009516)	UBXN2A (ENSEASG00005009983)	MFSD2B (ENSEASG00005009987)	WDCP (ENSEASG00005009991)	ENSEASG00005038315	SF3B6 (ENSEASG00005026473)
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Microbat	MODERN SPECIES	1031						RDH14 (ENSMLUG00000024368)	NT5C1B (ENSMLUG00000015910) #12	OSR1 (ENSMLUG00000011374) #13	TTC32 (ENSMLUG00000001415) #15	WDR35 (ENSMLUG00000001419) #16	MATN3 (ENSMLUG00000003456) #17	LAPTM4A (ENSMLUG00000001596) #18	SDC1 (ENSMLUG00000007349) #19	PUM2 (ENSMLUG00000007362) #21	ENSMLUG00000023764	RHOB (ENSMLUG00000001627) #22	ENSMLUG00000005981	HS1BP3 (ENSMLUG00000022201) #23	ENSMLUG00000027645 #24	LDAH (ENSMLUG00000007792) #25	ENSMLUG00000029392	APOB (ENSMLUG00000007812) #26	TDRD15 (ENSMLUG00000007897)	KLHL29 (ENSMLUG00000004470)	ATAD2B (ENSMLUG00000004476)	UBXN2A (ENSMLUG00000015640)	ENSMLUG00000013466	ENSMLUG00000030749	WDCP (ENSMLUG00000013485)	ENSMLUG00000030564	SF3B6 (ENSMLUG00000002473)
Greater horseshoe bat	MODERN SPECIES	4	VSNL1 (ENSRFEG00010006243) #7	SMC6 (ENSRFEG00010006174) #8	GEN1 (ENSRFEG00010006120) #9	MSGN1 (ENSRFEG00010006094) #10	KCNS3 (ENSRFEG00010006076) #11	RDH14 (ENSRFEG00010006059)	NT5C1B (ENSRFEG00010006003) #12	OSR1 (ENSRFEG00010005966) #13	TTC32 (ENSRFEG00010005945) #15	WDR35 (ENSRFEG00010005857) #16	MATN3 (ENSRFEG00010005757) #17	LAPTM4A (ENSRFEG00010005720) #18	SDC1 (ENSRFEG00010005688) #19	ENSRFEG00010005671	PUM2 (ENSRFEG00010005562) #21	RHOB (ENSRFEG00010005478) #22	HS1BP3 (ENSRFEG00010005461) #23	GDF7 (ENSRFEG00010005440) #24	LDAH (ENSRFEG00010005397) #25	APOB (ENSRFEG00010005349) #26	ENSRFEG00010005311	KLHL29 (ENSRFEG00010005296)	ATAD2B (ENSRFEG00010005280)	UBXN2A (ENSRFEG00010005270)	MFSD2B (ENSRFEG00010005251)	WDCP (ENSRFEG00010018155)	FKBP1B (ENSRFEG00010018043)	SF3B6 (ENSRFEG00010018003)	TP53I3 (ENSRFEG00010017946)	ENSRFEG00010017885	FAM228B (ENSRFEG00010017803)
Megabat	MODERN SPECIES	7122																RHOB (ENSPVAG00000012227) #22
Carnivora	ANCESTRAL SPECIES	19	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Felidae	ANCESTRAL SPECIES	3	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.c #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Panthera	DUPLICATION
Panthera	DUPLICATION
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.c #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b.l #22	ENSGT00950000182945.b.a.a.b.b.b.k.a #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00390000003628.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Tiger	MODERN SPECIES	149	SMC6 (ENSPTIG00000001154) #8	GEN1 (ENSPTIG00000007224) #9	MSGN1 (ENSPTIG00000006467) #10	KCNS3 (ENSPTIG00000006472) #11	RDH14 (ENSPTIG00000010724)	NT5C1B (ENSPTIG00000011201) #12	OSR1 (ENSPTIG00000012004) #13	TTC32 (ENSPTIG00000012474) #15	WDR35 (ENSPTIG00000012685) #16	MATN3 (ENSPTIG00000015261) #17	LAPTM4A (ENSPTIG00000016492) #18	SDC1 (ENSPTIG00000017404) #19	ENSPTIG00000018625	PUM2 (ENSPTIG00000018982) #21	ENSPTIG00000000251	RHOB (ENSPTIG00000006084) #22	HS1BP3 (ENSPTIG00000010200) #23	LDAH (ENSPTIG00000011369) #25	APOB (ENSPTIG00000012825) #26	ENSPTIG00000017235	TDRD15 (ENSPTIG00000006858)	ENSPTIG00000018573	KLHL29 (ENSPTIG00000019549)	ATAD2B (ENSPTIG00000020553)	UBXN2A (ENSPTIG00000006975)	MFSD2B (ENSPTIG00000008501)	WDCP (ENSPTIG00000011327)	FKBP1B (ENSPTIG00000011970)	SF3B6 (ENSPTIG00000013322)	TP53I3 (ENSPTIG00000013975)	PFN4 (ENSPTIG00000017288)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.c #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b.l #22	ENSGT00950000182945.b.a.a.b.b.b.k.a #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00390000003628.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
leopard	MODERN SPECIES		MSGN1 (ENSPPRG00000020043) #10	ENSPPRG00000020962	KCNS3 (ENSPPRG00000020060) #11	RDH14 (ENSPPRG00000020986)	NT5C1B (ENSPPRG00000021030) #12	OSR1 (ENSPPRG00000021067) #13	TTC32 (ENSPPRG00000021136) #15	WDR35 (ENSPPRG00000021186) #16	MATN3 (ENSPPRG00000021301) #17	LAPTM4A (ENSPPRG00000021333) #18	SDC1 (ENSPPRG00000021362) #19	ENSPPRG00000021380	PUM2 (ENSPPRG00000021443) #21	ENSPPRG00000021503	ENSPPRG00000020084 #22	ENSPPRG00000021519 #22	HS1BP3 (ENSPPRG00000021577) #23	GDF7 (ENSPPRG00000021614) #24	LDAH (ENSPPRG00000021658) #25	APOB (ENSPPRG00000021875) #26	TDRD15 (ENSPPRG00000020099)	ENSPPRG00000021960	ENSPPRG00000021990	KLHL29 (ENSPPRG00000022044)	ATAD2B (ENSPPRG00000022083)	UBXN2A (ENSPPRG00000022151)	MFSD2B (ENSPPRG00000022250)	WDCP (ENSPPRG00000022296)	FKBP1B (ENSPPRG00000023267)	SF3B6 (ENSPPRG00000023257)	TP53I3 (ENSPPRG00000023247)
Panthera	ANCESTRAL SPECIES																	ENSGT00950000182945.b.a.a.b.b.b.k.b #22
Panthera_a	ANCESTRAL SPECIES																	ENSGT00950000182945.b.a.a.b.b.b.k.b #22
leopard	MODERN SPECIES		GEN1 (ENSPPRG00000020921) #9	MSGN1 (ENSPPRG00000020043) #10	ENSPPRG00000020962	KCNS3 (ENSPPRG00000020060) #11	RDH14 (ENSPPRG00000020986)	NT5C1B (ENSPPRG00000021030) #12	OSR1 (ENSPPRG00000021067) #13	TTC32 (ENSPPRG00000021136) #15	WDR35 (ENSPPRG00000021186) #16	MATN3 (ENSPPRG00000021301) #17	LAPTM4A (ENSPPRG00000021333) #18	SDC1 (ENSPPRG00000021362) #19	ENSPPRG00000021380	PUM2 (ENSPPRG00000021443) #21	ENSPPRG00000021503	ENSPPRG00000020084 #22	ENSPPRG00000021519 #22	HS1BP3 (ENSPPRG00000021577) #23	GDF7 (ENSPPRG00000021614) #24	LDAH (ENSPPRG00000021658) #25	APOB (ENSPPRG00000021875) #26	TDRD15 (ENSPPRG00000020099)	ENSPPRG00000021960	ENSPPRG00000021990	KLHL29 (ENSPPRG00000022044)	ATAD2B (ENSPPRG00000022083)	UBXN2A (ENSPPRG00000022151)	MFSD2B (ENSPPRG00000022250)	WDCP (ENSPPRG00000022296)	FKBP1B (ENSPPRG00000023267)	SF3B6 (ENSPPRG00000023257)
Panthera	ANCESTRAL SPECIES	2	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.c #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b.l #22	ENSGT00950000182945.b.a.a.b.b.b.k.a #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00390000003628.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.c #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b.l #22	ENSGT00950000182945.b.a.a.b.b.b.k.a #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00390000003628.b	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217
lion	MODERN SPECIES	3	SMC6 (ENSPLOG00000004301) #8	GEN1 (ENSPLOG00000004334) #9	MSGN1 (ENSPLOG00000004343) #10	KCNS3 (ENSPLOG00000004351) #11	RDH14 (ENSPLOG00000004360)	NT5C1B (ENSPLOG00000004380) #12	OSR1 (ENSPLOG00000004407) #13	TTC32 (ENSPLOG00000004421) #15	WDR35 (ENSPLOG00000004441) #16	MATN3 (ENSPLOG00000004487) #17	ENSPLOG00000004505 #18	SDC1 (ENSPLOG00000004513) #19	ENSPLOG00000004519	PUM2 (ENSPLOG00000004537) #21	ENSPLOG00000004582	RHOB (ENSPLOG00000004676) #22	HS1BP3 (ENSPLOG00000004714) #23	GDF7 (ENSPLOG00000004729) #24	LDAH (ENSPLOG00000004752) #25	APOB (ENSPLOG00000004809) #26	TDRD15 (ENSPLOG00000000249)	ENSPLOG00000000267	KLHL29 (ENSPLOG00000000329)	ATAD2B (ENSPLOG00000000487)	UBXN2A (ENSPLOG00000000531)	MFSD2B (ENSPLOG00000000549)	WDCP (ENSPLOG00000000585)	FKBP1B (ENSPLOG00000000677)	SF3B6 (ENSPLOG00000000707)	TP53I3 (ENSPLOG00000000741)	PFN4 (ENSPLOG00000000771)
Caniformia	ANCESTRAL SPECIES	18	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.y	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00940000156513 #7	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.y	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
American mink	MODERN SPECIES	7	ENSNVIG00000013510	KCNS3 (ENSNVIG00000013506) #11	RDH14 (ENSNVIG00000013495)	NT5C1B (ENSNVIG00000013468) #12	ENSNVIG00000013455	OSR1 (ENSNVIG00000013439) #13	TTC32 (ENSNVIG00000013413) #15	WDR35 (ENSNVIG00000013269) #16	MATN3 (ENSNVIG00000013221) #17	LAPTM4A (ENSNVIG00000013199) #18	SDC1 (ENSNVIG00000013190) #19	ENSNVIG00000013188	ENSNVIG00000013176	PUM2 (ENSNVIG00000013016) #21	ENSNVIG00000012955	RHOB (ENSNVIG00000012943) #22	ENSNVIG00000012923 #23	ENSNVIG00000012914 #24	ENSNVIG00000012897 #24	B5MDU6 (ENSNVIG00000012863) #25	APOB (ENSNVIG00000012830) #26	TDRD15 (ENSNVIG00000012820)	ENSNVIG00000012796	ENSNVIG00000012791	KLHL29 (ENSNVIG00000012776)	ATAD2B (ENSNVIG00000012717)	UBXN2A (ENSNVIG00000012711)	MFSD2B (ENSNVIG00000012679)	WDCP (ENSNVIG00000012667)	ENSNVIG00000012661	ENSNVIG00000012654
Ferret	MODERN SPECIES	178	VSNL1 (ENSMPUG00000013641) #7	SMC6 (ENSMPUG00000013644) #8	GEN1 (ENSMPUG00000013651) #9	MSGN1 (ENSMPUG00000019484) #10	KCNS3 (ENSMPUG00000019486) #11	RDH14 (ENSMPUG00000013659)	NT5C1B (ENSMPUG00000013662) #12	OSR1 (ENSMPUG00000013697) #13	TTC32 (ENSMPUG00000013701) #15	WDR35 (ENSMPUG00000013708) #16	MATN3 (ENSMPUG00000013713) #17	LAPTM4A (ENSMPUG00000013714) #18	SDC1 (ENSMPUG00000013732) #19	PUM2 (ENSMPUG00000013734) #21	ENSMPUG00000013736	RHOB (ENSMPUG00000019487) #22	HS1BP3 (ENSMPUG00000013739) #23	GDF7 (ENSMPUG00000013742) #24	LDAH (ENSMPUG00000013748) #25	APOB (ENSMPUG00000013749) #26	TDRD15 (ENSMPUG00000013753)	KLHL29 (ENSMPUG00000013755)	ATAD2B (ENSMPUG00000013855)	UBXN2A (ENSMPUG00000013862)	MFSD2B (ENSMPUG00000013875)	WDCP (ENSMPUG00000013937)	FKBP1B (ENSMPUG00000013941)	SF3B6 (ENSMPUG00000013957)	TP53I3 (ENSMPUG00000013959)	PFN4 (ENSMPUG00000013981)	FAM228B (ENSMPUG00000013988)
Ursidae	ANCESTRAL SPECIES	9	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.f #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b.d	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.y	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a
Ursus	ANCESTRAL SPECIES	27	ENSGT00550000074816.A.a #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b.f #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b.d	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908.y	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
American black bear	MODERN SPECIES	148															ENSUAMG00000007308	RHOB (ENSUAMG00000007296) #22	HS1BP3 (ENSUAMG00000007294) #23
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	14	VSNL1 (ENSAMEG00000011624) #7	SMC6 (ENSAMEG00000002654) #8	GEN1 (ENSAMEG00000002666) #9	MSGN1 (ENSAMEG00000019874) #10	KCNS3 (ENSAMEG00000019878) #11	NT5C1B (ENSAMEG00000002686) #12	OSR1 (ENSAMEG00000002708) #13	TTC32 (ENSAMEG00000002717) #15	WDR35 (ENSAMEG00000002724) #16	MATN3 (ENSAMEG00000002771) #17	LAPTM4A (ENSAMEG00000002787) #18	SDC1 (ENSAMEG00000002804) #19	ENSAMEG00000025209	PUM2 (ENSAMEG00000002823) #21	ENSAMEG00000002884	RHOB (ENSAMEG00000019884) #22	ENSAMEG00000025415 #23	ENSAMEG00000002904 #24	LDAH (ENSAMEG00000029431) #25	APOB (ENSAMEG00000013086) #26	TDRD15 (ENSAMEG00000029907)	KLHL29 (ENSAMEG00000002886)	ATAD2B (ENSAMEG00000002853)	UBXN2A (ENSAMEG00000002843)	MFSD2B (ENSAMEG00000002807)	WDCP (ENSAMEG00000002801)	FKBP1B (ENSAMEG00000029795)	SF3B6 (ENSAMEG00000002786)	TP53I3 (ENSAMEG00000002781)	PFN4 (ENSAMEG00000002778)	ENSAMEG00000025446
Giant Panda	MODERN SPECIES	1299																ENSAMEG00000030106 #22
Canidae	ANCESTRAL SPECIES	46	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00980000202730	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00940000153609.b.w.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Red fox	MODERN SPECIES	107	MSGN1 (ENSVVUG00000014790) #10	KCNS3 (ENSVVUG00000014792) #11	ENSVVUG00000014794	RDH14 (ENSVVUG00000014797)	NT5C1B (ENSVVUG00000014799) #12	OSR1 (ENSVVUG00000014812) #13	ENSVVUG00000014817 #15	WDR35 (ENSVVUG00000014818) #16	MATN3 (ENSVVUG00000014820) #17	LAPTM4A (ENSVVUG00000014821) #18	SDC1 (ENSVVUG00000014823) #19	ENSVVUG00000014826	PUM2 (ENSVVUG00000014829) #21	ENSVVUG00000014837	ENSVVUG00000014838	RHOB (ENSVVUG00000014839) #22	HS1BP3 (ENSVVUG00000014842) #23	LDAH (ENSVVUG00000014846) #25	APOB (ENSVVUG00000014850) #26	TDRD15 (ENSVVUG00000014860)	ENSVVUG00000014880	KLHL29 (ENSVVUG00000014884)	ATAD2B (ENSVVUG00000014891)	ENSVVUG00000014896	UBXN2A (ENSVVUG00000014898)
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00980000202468	ENSGT00980000202730	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688 #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00940000153609.b.w.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067
Dingo	MODERN SPECIES	223	ENSCAFG00020026044 #9	MSGN1 (ENSCAFG00020026040) #10	KCNS3 (ENSCAFG00020026039) #11	ENSCAFG00020026037	RDH14 (ENSCAFG00020026035)	NT5C1B (ENSCAFG00020026028) #12	OSR1 (ENSCAFG00020026025) #13	TTC32 (ENSCAFG00020026024) #15	WDR35 (ENSCAFG00020025847) #16	LAPTM4A (ENSCAFG00020025761) #18	SDC1 (ENSCAFG00020025760) #19	ENSCAFG00020025758	PUM2 (ENSCAFG00020025689) #21	ENSCAFG00020025683	ENSCAFG00020025680	RHOB (ENSCAFG00020025677) #22	HS1BP3 (ENSCAFG00020025673) #23	GDF7 (ENSCAFG00020025671) #24	LDAH (ENSCAFG00020025670) #25	APOB (ENSCAFG00020025649) #26	TDRD15 (ENSCAFG00020025627)	KLHL29 (ENSCAFG00020025619)	ENSCAFG00020025616	ATAD2B (ENSCAFG00020025604)	ENSCAFG00020025601	MFSD2B (ENSCAFG00020025582)	WDCP (ENSCAFG00020025578)	FKBP1B (ENSCAFG00020025577)	SF3B6 (ENSCAFG00020025576)	TP53I3 (ENSCAFG00020025575)	PFN4 (ENSCAFG00020025574)
Dog	MODERN SPECIES	8	GEN1 (ENSCAFG00845017081) #9	MSGN1 (ENSCAFG00845017161) #10	KCNS3 (ENSCAFG00845017227) #11	ENSCAFG00845017269	ENSCAFG00845017291	NT5C1B (ENSCAFG00845017330)	NT5C1B (ENSCAFG00845017369) #12	OSR1 (ENSCAFG00845017551) #13	TTC32 (ENSCAFG00845017602) #15	WDR35 (ENSCAFG00845017734) #16	MATN3 (ENSCAFG00845018475) #17	MATN3 (ENSCAFG00845018598) #18	SDC1 (ENSCAFG00845018675) #19	PUM2 (ENSCAFG00845018880) #21	ENSCAFG00845019715	RHOB (ENSCAFG00845019784) #22	HS1BP3 (ENSCAFG00845019848) #23	GDF7 (ENSCAFG00845020009) #24	LDAH (ENSCAFG00845020079) #25	APOB (ENSCAFG00845020315) #26	TDRD15 (ENSCAFG00845020461)	KLHL29 (ENSCAFG00845020825)	ATAD2B (ENSCAFG00845021031)	ENSCAFG00845021908	ENSCAFG00845021952	ENSCAFG00845022118	WDCP (ENSCAFG00845022467)	FKBP1B (ENSCAFG00845022652)	ENSCAFG00845022727	SF3B6 (ENSCAFG00845022757)	TP53I3 (ENSCAFG00845022815)
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000163503.B	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000165918	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Xenarthra	ANCESTRAL SPECIES	1523																ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24
Armadillo	MODERN SPECIES	1890																RHOB (ENSDNOG00000045615) #22	HS1BP3 (ENSDNOG00000040560) #23	ENSDNOG00000044453 #24
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000163503.B	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000165918	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Tenrec	MODERN SPECIES	15296																RHOB (ENSETEG00000007301) #22
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000163503.B	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00940000165918	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b
Hyrax	MODERN SPECIES	8854																ENSPCAG00000011302 #22
Elephant	MODERN SPECIES	197	ENSLAFG00000029496	ENSLAFG00000028092	KCNS3 (ENSLAFG00000021521) #11	RDH14 (ENSLAFG00000022569)	NT5C1B (ENSLAFG00000007746) #12	OSR1 (ENSLAFG00000027174) #13	ENSLAFG00000027572	ENSLAFG00000030361	TTC32 (ENSLAFG00000014830) #15	WDR35 (ENSLAFG00000014834) #16	MATN3 (ENSLAFG00000014853) #17	LAPTM4A (ENSLAFG00000013774) #18	SDC1 (ENSLAFG00000022920) #19	PUM2 (ENSLAFG00000009278) #21	ENSLAFG00000030177	RHOB (ENSLAFG00000000243) #22	HS1BP3 (ENSLAFG00000013276) #23	GDF7 (ENSLAFG00000021797) #24	APOB (ENSLAFG00000009232) #26	TDRD15 (ENSLAFG00000026920)	KLHL29 (ENSLAFG00000013813)	ATAD2B (ENSLAFG00000016605)	UBXN2A (ENSLAFG00000017493)	MFSD2B (ENSLAFG00000023340)	WDCP (ENSLAFG00000017499)	FKBP1B (ENSLAFG00000005196)	SF3B6 (ENSLAFG00000029423)	TP53I3 (ENSLAFG00000017221)	PFN4 (ENSLAFG00000025557)	FAM228B (ENSLAFG00000020782)	ENSLAFG00000000618
Marsupialia	ANCESTRAL SPECIES	35	ENSGT00550000074816.A.a.f #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092 #23	ENSGT00940000160140.b #24	ENSGT00390000009688.s #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00550000074816.A.a.f #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092.b #23	ENSGT00940000160140.b #24	ENSGT00390000009688.s #25	ENSGT00590000083139 #26	ENSGT00940000162581	ENSGT00940000158824	ENSGT00550000074694.b	ENSGT00520000055567.a.b	ENSGT00390000005318.b.b.a	ENSGT00390000001660	ENSGT00940000153311.a.b.b	ENSGT00390000005908	ENSGT00940000161217	ENSGT00390000017067	ENSGT00530000064185
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000030834	CYRIA (ENSSHAG00000031827)	ENSSHAG00000030057	VSNL1 (ENSSHAG00000030993) #7	ENSSHAG00000004113 #8	ENSSHAG00000020514 #9	KCNS3 (ENSSHAG00000001315) #11	RDH14 (ENSSHAG00000009042)	ENSSHAG00000008640 #12	WDR35 (ENSSHAG00000007255) #16	MATN3 (ENSSHAG00000006973) #17	LAPTM4A (ENSSHAG00000006571) #18	ENSSHAG00000031833	PUM2 (ENSSHAG00000002778) #21	ENSSHAG00000000746	RHOB (ENSSHAG00000031379) #22	ENSSHAG00000007625 #23	GDF7 (ENSSHAG00000024813) #24	ENSSHAG00000025983 #25	ENSSHAG00000006797 #25	APOB (ENSSHAG00000002807) #26	TDRD15 (ENSSHAG00000023534)	ENSSHAG00000021453	KLHL29 (ENSSHAG00000005480)	ATAD2B (ENSSHAG00000006260)	UBXN2A (ENSSHAG00000028943)	ENSSHAG00000030174	ENSSHAG00000024773	FKBP1B (ENSSHAG00000003019)	SF3B6 (ENSSHAG00000026933)	ENSSHAG00000025779
Diprotodontia	ANCESTRAL SPECIES	35	ENSGT00550000074816.A.a.f #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092.b #23	ENSGT00940000160140.b #24	ENSGT00390000009688.s #25	ENSGT00590000083139 #26	ENSGT00940000162581
Diprotodontia_a	ANCESTRAL SPECIES	34	ENSGT00550000074816.A.a.f #8	ENSGT00940000159266 #9	ENSGT00530000063712.a.b #10	ENSGT00940000155979 #11	ENSGT00940000160181	ENSGT00390000017767.b.a #12	ENSGT00940000158993 #13	ENSGT00390000011905 #15	ENSGT00940000155745 #16	ENSGT00940000157581 #17	ENSGT00940000153446.b #18	ENSGT00940000161171 #19	ENSGT00900000143081	ENSGT00940000157575 #21	ENSGT00940000162520.d	ENSGT00950000182945.b.a.a.b.b.b #22	ENSGT00390000013092.b #23	ENSGT00940000160140.b #24	ENSGT00390000009688.s #25	ENSGT00590000083139 #26	ENSGT00940000162581
Common wonbat	MODERN SPECIES	694	VSNL1 (ENSVURG00010023772) #7	ENSVURG00010023775 #8	GEN1 (ENSVURG00010023780) #9	MSGN1 (ENSVURG00010023787) #10	KCNS3 (ENSVURG00010023790) #11	RDH14 (ENSVURG00010023793)	ENSVURG00010023796 #12	ENSVURG00010023800 #13	TTC32 (ENSVURG00010023802) #15	WDR35 (ENSVURG00010023804) #16	LAPTM4A (ENSVURG00010023811) #18	ENSVURG00010023814 #19	ENSVURG00010023816	PUM2 (ENSVURG00010023817) #21	ENSVURG00010023821	RHOB (ENSVURG00010023826) #22
koala	MODERN SPECIES	175	ENSPCIG00000029439 #8	ENSPCIG00000029438 #9	MSGN1 (ENSPCIG00000029437) #10	KCNS3 (ENSPCIG00000029436) #11	RDH14 (ENSPCIG00000024554)	ENSPCIG00000016776 #12	OSR1 (ENSPCIG00000011035) #13	TTC32 (ENSPCIG00000035406) #15	ENSPCIG00000022097 #16	MATN3 (ENSPCIG00000016627) #17	LAPTM4A (ENSPCIG00000016629) #18	ENSPCIG00000035866 #19	ENSPCIG00000022138	PUM2 (ENSPCIG00000022139) #21	ENSPCIG00000022147	RHOB (ENSPCIG00000036417) #22	ENSPCIG00000022157 #23	GDF7 (ENSPCIG00000036380) #24	ENSPCIG00000022174 #25	APOB (ENSPCIG00000008641) #26	TDRD15 (ENSPCIG00000007414)
Wallaby	MODERN SPECIES	11968																RHOB (ENSMEUG00000000058) #22
Platypus	DUPLICATION
Platypus	MODERN SPECIES	20	ENSOANG00000041695 #15	APMAP (ENSOANG00000038065)	ENSOANG00000040205	ACSS1 (ENSOANG00000003805)	ENSOANG00000046868	ENTPD6 (ENSOANG00000021164)	PYGB (ENSOANG00000009608)	ABHD12 (ENSOANG00000042191)	GINS1 (ENSOANG00000004118)	ENSOANG00000039988	PUM2 (ENSOANG00000005907) #21	ENSOANG00000001136 #19	LAPTM4A (ENSOANG00000001105) #18	MATN3 (ENSOANG00000037447) #17	WDR35 (ENSOANG00000047974) #16	RHOB (ENSOANG00000008835) #22	ENSOANG00000004402 #23	ENSOANG00000015095 ##24	LDAH (ENSOANG00000020206) #25	APOB (ENSOANG00000003378) #26	ENSOANG00000047651	KLHL29 (ENSOANG00000007620)	ATAD2B (ENSOANG00000007622)	UBXN2A (ENSOANG00000042505)	MFSD2B (ENSOANG00000007625)	ENSOANG00000007626	ENSOANG00000048768	SF3B6 (ENSOANG00000044973)	TP53I3 (ENSOANG00000007628)	ENSOANG00000007629	ITSN2 (ENSOANG00000004681)
Platypus	MODERN SPECIES	17	MBNL3 (ENSOANG00000011697)	RAP2C (ENSOANG00000011699)	FRMD7 (ENSOANG00000011700)	STK26 (ENSOANG00000011701)	IL13RA1 (ENSOANG00000019956)	DOCK11 (ENSOANG00000012828)	ENSOANG00000039307	ARAF (ENSOANG00000012826)	SYN1 (ENSOANG00000021601)	CFP (ENSOANG00000005657)	ENSOANG00000036830	ENSOANG00000014214	ENSOANG00000040667	USP11 (ENSOANG00000003109)	CDK16 (ENSOANG00000003108)	ENSOANG00000050430 #22	UBA1 (ENSOANG00000036317)	ENSOANG00000004553	NDUFB11 (ENSOANG00000037175)	ENSOANG00000046222	RBM10 (ENSOANG00000004552)	ENSOANG00000004550	ENSOANG00000004774	ENSOANG00000047650	IMP4 (ENSOANG00000014598)	ENSOANG00000014597	MON1B (ENSOANG00000039235)	CXXC1 (ENSOANG00000014594)	ENSOANG00000042027	ENSOANG00000051319	ABT1 (ENSOANG00000014590)