Vertebrata ANCESTRAL SPECIES ENSGT00940000157546 #22 Gnathostomata ANCESTRAL SPECIES 55 ENSGT01000000214434.F ENSGT00390000017123.a ENSGT00940000159251 ENSGT00940000171673 ENSGT00940000165098 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000157668 ENSGT00940000155136 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042 #24 ENSGT00940000157399 Euteleostomi ANCESTRAL SPECIES 48 ENSGT00390000017123.a ENSGT00940000159251 ENSGT00940000171673 ENSGT00940000165098 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000157668 ENSGT00940000155136 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000155042.a.b ##24 ENSGT00940000155042.a.a ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.a.a ENSGT00390000006387 ENSGT00940000154690 Sarcopterygii ANCESTRAL SPECIES 100 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162805 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.a.a ENSGT00390000006387 ENSGT00940000154690 ENSGT00940000155026 Tetrapoda ANCESTRAL SPECIES 8 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00530000063273.a Amniota ANCESTRAL SPECIES 9 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00530000063273.a Mammalia ANCESTRAL SPECIES 47 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00980000201734 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000159943 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00530000063273.a Theria ANCESTRAL SPECIES 3 ENSGT00400000024146 ENSGT00940000162886 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00390000002443 Eutheria ANCESTRAL SPECIES ENSGT00940000162886 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Glires ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Rodentia ANCESTRAL SPECIES ENSGT00940000161441 #7 ENSGT00940000163570 #8 ENSGT00940000155173.f.b.a ##10 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Rodentia_A ANCESTRAL SPECIES ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163570 #8 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb ENSGT00940000154690.mb.b ENSGT00940000155026 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000161441 #7 ENSGT00940000163570.c #8 ENSGT00940000155173.f.a.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A.c #20 ENSGT00940000162562.A.d #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988.f ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.mb.b ENSGT00940000155026 ENSGT00940000159943 Marmotini ANCESTRAL SPECIES ENSGT00940000163570.d ##8 ENSGT00940000155173.f.a.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A.c #20 ENSGT00940000164707.e.b ##19 ENSGT00940000162562.A.d #21 ENSGT00940000164707.e.a ##19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988.f ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.mb.b ENSGT00940000155026 ENSGT00940000159943 Marmotini_b ANCESTRAL SPECIES ENSGT00940000163570.c #8 ENSGT00940000163570.d ##8 ENSGT00940000155173.f.a.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A.c #20 ENSGT00940000162562.A.d #21 ENSGT00940000164707.e.a ##19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988.f ENSGT00950000182917.a.b.a ENSGT00940000155751.m ENSGT00950000182915.b.b.b.a ENSGT00940000154690.mb.b ENSGT00940000155026 ENSGT00940000159943 Squirrel MODERN SPECIES 74 CYP4B1 (ENSSTOG00000001409) #7 ENSSTOG00000013550 #8 ENSSTOG00000028206 #9 ENSSTOG00000015913 #10 CYP4X1 (ENSSTOG00000013556) #11 PDZK1IP1 (ENSSTOG00000024038) #12 TAL1 (ENSSTOG00000008396) #13 STIL (ENSSTOG00000014333) #14 CMPK1 (ENSSTOG00000007706) #15 FOXE3 (ENSSTOG00000033171) #16 FOXD2 (ENSSTOG00000027420) #17 TRABD2B (ENSSTOG00000028454) #18 ENSSTOG00000023168 #19 ENSSTOG00000024899 #20 ENSSTOG00000023325 #21 SLC5A9 (ENSSTOG00000006889) #22 SPATA6 (ENSSTOG00000006944) #23 AGBL4 (ENSSTOG00000006972) #24 BEND5 (ENSSTOG00000006997) #25 Arctic ground squirrel MODERN SPECIES 467 CYP4X1 (ENSUPAG00010016640) #11 PDZK1IP1 (ENSUPAG00010016618) #12 TAL1 (ENSUPAG00010016605) #13 STIL (ENSUPAG00010016480) #14 CMPK1 (ENSUPAG00010016469) #15 FOXE3 (ENSUPAG00010016452) #16 FOXD2 (ENSUPAG00010016448) #17 TRABD2B (ENSUPAG00010016431) #18 ENSUPAG00010016417 ##21 ENSUPAG00010016396 #20 ENSUPAG00010016356 #21 ENSUPAG00010016315 ##19 SLC5A9 (ENSUPAG00010016240) #22 ENSUPAG00010015913 #23 Alpin marmot MODERN SPECIES 15 ENSMMMG00000018225 ENSMMMG00000018214 #10 ENSMMMG00000018152 #8 CYP4X1 (ENSMMMG00000018100) #11 PDZK1IP1 (ENSMMMG00000018092) #12 ENSMMMG00000018085 #13 STIL (ENSMMMG00000018013) #14 CMPK1 (ENSMMMG00000017986) #15 FOXD2 (ENSMMMG00000017982) #17 TRABD2B (ENSMMMG00000017951) #18 ENSMMMG00000017939 ##21 ENSMMMG00000017918 #20 ENSMMMG00000017906 ##19 ENSMMMG00000017897 #21 ENSMMMG00000017885 ##19 SLC5A9 (ENSMMMG00000017850) #22 ENSMMMG00000017834 #23 BEND5 (ENSMMMG00000017823) #25 AGBL4 (ENSMMMG00000017802) #24 ELAVL4 (ENSMMMG00000017637) ENSMMMG00000017613 FAF1 (ENSMMMG00000017599) CDKN2C (ENSMMMG00000017571) ENSMMMG00000017564 C1orf185 (ENSMMMG00000017543) RNF11 (ENSMMMG00000017539) TTC39A (ENSMMMG00000017526) EPS15 (ENSMMMG00000017432) ENSMMMG00000017404 ENSMMMG00000017393 ENSMMMG00000016694 Eurasian red squirrel MODERN SPECIES ENSSVLG00005008688 ENSSVLG00005008878 ##10 ENSSVLG00005009845 #10 ENSSVLG00005010122 #10 CYP4X1 (ENSSVLG00005010957) #11 PDZK1IP1 (ENSSVLG00005011099) #12 TAL1 (ENSSVLG00005011145) #13 STIL (ENSSVLG00005011246) #14 ENSSVLG00005012034 #15 FOXE3 (ENSSVLG00005012158) #16 FOXD2 (ENSSVLG00005012190) #17 TRABD2B (ENSSVLG00005012216) #18 ENSSVLG00005012317 ##21 ENSSVLG00005012369 #20 ENSSVLG00005012469 #19 SLC5A9 (ENSSVLG00005012665) #22 SPATA6 (ENSSVLG00005013178) #23 AGBL4 (ENSSVLG00005013331) #24 BEND5 (ENSSVLG00005013425) #25 ELAVL4 (ENSSVLG00005014154) DMRTA2 (ENSSVLG00005014792) FAF1 (ENSSVLG00005014843) CDKN2C (ENSSVLG00005014944) C1orf185 (ENSSVLG00005015015) ENSSVLG00005015219 ENSSVLG00005015243 TTC39A (ENSSVLG00005015332) EPS15 (ENSSVLG00005015885) ENSSVLG00005016035 ENSSVLG00005016060 OSBPL9 (ENSSVLG00005016219) Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163570.a #8 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb ENSGT00940000155026 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163570.a #8 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb ENSGT00940000155026 Hystricomorpha_b ANCESTRAL SPECIES 54 ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163570.a #8 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589.k #15 ENSGT00940000163540 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb ENSGT00940000155026 Long-tailed chinchilla MODERN SPECIES 171 ENSCLAG00000004751 MKNK1 (ENSCLAG00000003888) MOB3C (ENSCLAG00000006684) ATPAF1 (ENSCLAG00000006456) TEX38 (ENSCLAG00000006425) EFCAB14 (ENSCLAG00000005792) ENSCLAG00000005609 #8 ENSCLAG00000005036 #8 ENSCLAG00000004484 #10 CYP4B1 (ENSCLAG00000007349) #7 PDZK1IP1 (ENSCLAG00000007015) #12 TAL1 (ENSCLAG00000006842) #13 STIL (ENSCLAG00000006217) #14 ENSCLAG00000005985 TRABD2B (ENSCLAG00000005900) #18 SLC5A9 (ENSCLAG00000007839) #22 SPATA6 (ENSCLAG00000007504) #23 BEND5 (ENSCLAG00000007168) #25 AGBL4 (ENSCLAG00000006735) #24 ELAVL4 (ENSCLAG00000005476) DMRTA2 (ENSCLAG00000008314) FAF1 (ENSCLAG00000008153) CDKN2C (ENSCLAG00000007763) C1orf185 (ENSCLAG00000007634) ENSCLAG00000006939 TTC39A (ENSCLAG00000005328) EPS15 (ENSCLAG00000005042) ENSCLAG00000004460 ENSCLAG00000009812 OSBPL9 (ENSCLAG00000006250) NRDC (ENSCLAG00000004925) Degu MODERN SPECIES 148 EFCAB14 (ENSODEG00000008413) ENSODEG00000007435 CYP4B1 (ENSODEG00000010933) #7 ENSODEG00000006838 #8 ENSODEG00000019580 ENSODEG00000006889 #8 CYP4X1 (ENSODEG00000007165) #11 PDZK1IP1 (ENSODEG00000008906) #12 TAL1 (ENSODEG00000006602) #13 STIL (ENSODEG00000007478) #14 ENSODEG00000007423 #15 ENSODEG00000006760 ENSODEG00000019646 ENSODEG00000008585 TRABD2B (ENSODEG00000007567) #18 SLC5A9 (ENSODEG00000007740) #22 SPATA6 (ENSODEG00000006382) #23 BEND5 (ENSODEG00000007742) #25 ENSODEG00000006988 ENSODEG00000019354 AGBL4 (ENSODEG00000009564) #24 ENSODEG00000007109 ELAVL4 (ENSODEG00000006770) DMRTA2 (ENSODEG00000006537) FAF1 (ENSODEG00000010743) CDKN2C (ENSODEG00000010220) ENSODEG00000007244 ENSODEG00000006863 ENSODEG00000009865 ENSODEG00000009489 TTC39A (ENSODEG00000006441) Guinea pig DUPLICATION Guinea pig DUPLICATION Guinea pig MODERN SPECIES 347 ENSCPOG00000032674 #22 Guinea pig MODERN SPECIES 306 ENSCPOG00000024246 #22 ENSCPOG00000006492 #22 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 306 ENSCPOG00000024246 #22 ENSCPOG00000006492 #22 Guinea pig MODERN SPECIES 187 ENSCPOG00000002481 #22 TRABD2B (ENSCPOG00000011762) #18 FOXD2 (ENSCPOG00000039211) #17 CMPK1 (ENSCPOG00000031837) #15 STIL (ENSCPOG00000003560) #14 TAL1 (ENSCPOG00000003558) #13 PDZK1IP1 (ENSCPOG00000037323) #12 CYP4X1 (ENSCPOG00000002997) #11 ENSCPOG00000011024 #10 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000003682 #10 ENSHGLG00000036589 ENSHGLG00000008660 #7 ENSHGLG00000050738 #10 CYP4X1 (ENSHGLG00000002395) #11 PDZK1IP1 (ENSHGLG00000001653) #12 TAL1 (ENSHGLG00000047206) #13 ENSHGLG00000001377 STIL (ENSHGLG00000001713) #14 ENSHGLG00000001416 FOXE3 (ENSHGLG00000034395) #16 ENSHGLG00000049793 ENSHGLG00000020805 ENSHGLG00000010693 #18 ENSHGLG00000037697 SLC5A9 (ENSHGLG00000003161) #22 ENSHGLG00000002670 SPATA6 (ENSHGLG00000014205) #23 ENSHGLG00000011360 #25 ENSHGLG00000034647 #25 ENSHGLG00000039566 ENSHGLG00000043536 ELAVL4 (ENSHGLG00000000485) ENSHGLG00000037718 DMRTA2 (ENSHGLG00000001509) CDKN2C (ENSHGLG00000034852) FAF1 (ENSHGLG00000000538) ENSHGLG00000034536 ENSHGLG00000001310 ENSHGLG00000000349 ENSHGLG00000003489 Rodentia_B ANCESTRAL SPECIES ENSGT00940000161441 #7 ENSGT00940000163570 #8 ENSGT00940000155173.f.b.b ##10 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000161441 #7 ENSGT00940000163570 #8 ENSGT00940000155173.f.b.b ##10 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Muroidea ANCESTRAL SPECIES 3 ENSGT00940000161441 #7 ENSGT00940000163570 #8 ENSGT00940000155173.f.b.b ##10 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000155173.f.b.b ##10 ENSGT00940000163570.e.a #8 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A.a.a.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000155173.f.b.b ##10 ENSGT00940000163570.e.b #8 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A.a.a.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.d #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000163570.e.a #8 ENSGT00940000155173.f.b.b ##10 ENSGT00940000163570.e.b #8 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A.a.a.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.d #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Chinese hamster chok1gshd MODERN SPECIES 111 ENSCGRG00001009269 ##10 ENSCGRG00001019487 #8 Cyp4x1 (ENSCGRG00001021846) #11 Pdzk1ip1 (ENSCGRG00001022750) #12 Tal1 (ENSCGRG00001023671) #13 Stil (ENSCGRG00001012804) #14 Cmpk1 (ENSCGRG00001016283) #15 Foxe3 (ENSCGRG00001005301) #16 Foxd2 (ENSCGRG00001010484) #17 ENSCGRG00001022727 Trabd2b (ENSCGRG00001016130) #18 ENSCGRG00001018354 ##21 ENSCGRG00001021187 #21 ENSCGRG00001021660 #21 ENSCGRG00001023213 #19 Slc5a9 (ENSCGRG00001019511) #22 Spata6 (ENSCGRG00001001168) #23 Agbl4 (ENSCGRG00001017075) #24 Bend5 (ENSCGRG00001018629) #25 Elavl4 (ENSCGRG00001020348) Dmrta2 (ENSCGRG00001010624) Faf1 (ENSCGRG00001012451) Cdkn2c (ENSCGRG00001013915) 4930522H14Rik (ENSCGRG00001016306) Rnf11 (ENSCGRG00001018595) Ttc39a (ENSCGRG00001020495) Eps15 (ENSCGRG00001009890) Calr4 (ENSCGRG00001011514) Osbpl9 (ENSCGRG00001021068) Nrd1 (ENSCGRG00001022296) Rab3b (ENSCGRG00001013853) Golden Hamster MODERN SPECIES 648 Cyp4a30b (ENSMAUG00000010739) #8 ENSMAUG00000021832 #8 Cyp4x1 (ENSMAUG00000011941) #11 Pdzk1ip1 (ENSMAUG00000019882) #12 Tal1 (ENSMAUG00000001565) #13 Stil (ENSMAUG00000018720) #14 ENSMAUG00000019205 Foxe3 (ENSMAUG00000010093) #16 Foxd2 (ENSMAUG00000010964) #17 ENSMAUG00000009858 Trabd2b (ENSMAUG00000006510) #18 ENSMAUG00000013879 ##21 ENSMAUG00000004245 #21 ENSMAUG00000008748 #21 ENSMAUG00000020229 #19 Slc5a9 (ENSMAUG00000016902) #22 ENSMAUG00000008507 #23 ENSMAUG00000021230 #23 Agbl4 (ENSMAUG00000020446) #24 Bend5 (ENSMAUG00000007838) #25 Elavl4 (ENSMAUG00000021566) Dmrta2 (ENSMAUG00000012169) Faf1 (ENSMAUG00000011844) Cdkn2c (ENSMAUG00000019466) 4930522H14Rik (ENSMAUG00000018143) Rnf11 (ENSMAUG00000014680) Ttc39a (ENSMAUG00000013412) Eps15 (ENSMAUG00000021661) Calr4 (ENSMAUG00000016786) Osbpl9 (ENSMAUG00000011321) Nrd1 (ENSMAUG00000012215) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000155173.f.b.b ##10 ENSGT00940000163570.e.a #8 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000165990 ENSGT00940000162562.A.a.a.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.d #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Northern American deer mouse MODERN SPECIES 11 ENSPEMG00000021445 ##10 Cyp4x1 (ENSPEMG00000021657) #11 ENSPEMG00000022028 #12 Tal1 (ENSPEMG00000024420) #13 Stil (ENSPEMG00000023881) #14 Cmpk1 (ENSPEMG00000021852) #15 Foxe3 (ENSPEMG00000025577) #16 Trabd2b (ENSPEMG00000021574) #18 ENSPEMG00000008143 #19 ENSPEMG00000023162 #21 ENSPEMG00000026129 ENSPEMG00000030740 #21 ENSPEMG00000021558 #21 Skint1 (ENSPEMG00000011155) #21 ENSPEMG00000021177 #19 Slc5a9 (ENSPEMG00000021770) #22 Spata6 (ENSPEMG00000022120) #23 Bend5 (ENSPEMG00000022292) #25 Agbl4 (ENSPEMG00000023297) #24 Elavl4 (ENSPEMG00000021058) Dmrta2 (ENSPEMG00000028558) Faf1 (ENSPEMG00000022043) Cdkn2c (ENSPEMG00000029349) ENSPEMG00000030255 4930522H14Rik (ENSPEMG00000020496) Rnf11 (ENSPEMG00000028550) Ttc39a (ENSPEMG00000021737) ENSPEMG00000029734 Eps15 (ENSPEMG00000017501) Calr4 (ENSPEMG00000015759) Osbpl9 (ENSPEMG00000023026) Prairie vole MODERN SPECIES 1 ENSMOCG00000018767 #8 ENSMOCG00000001637 ##10 ENSMOCG00000020038 #8 Cyp4x1 (ENSMOCG00000021415) #11 Pdzk1ip1 (ENSMOCG00000021926) #12 Tal1 (ENSMOCG00000015608) #13 Stil (ENSMOCG00000001995) #14 Cmpk1 (ENSMOCG00000019310) #15 Foxe3 (ENSMOCG00000008738) #16 Foxd2 (ENSMOCG00000002875) #17 Trabd2b (ENSMOCG00000002510) #18 ENSMOCG00000012467 ENSMOCG00000013586 #21 ENSMOCG00000003588 #21 ENSMOCG00000019561 #19 Slc5a9 (ENSMOCG00000022328) #22 ENSMOCG00000021709 #23 Bend5 (ENSMOCG00000003340) #25 Agbl4 (ENSMOCG00000016733) #24 Elavl4 (ENSMOCG00000010309) Dmrta2 (ENSMOCG00000018451) Faf1 (ENSMOCG00000016469) Cdkn2c (ENSMOCG00000008425) 4930522H14Rik (ENSMOCG00000014783) Rnf11 (ENSMOCG00000014218) Ttc39a (ENSMOCG00000009418) Eps15 (ENSMOCG00000004099) Calr4 (ENSMOCG00000002656) ENSMOCG00000017309 Osbpl9 (ENSMOCG00000017056) Nrd1 (ENSMOCG00000008359) Murinae ANCESTRAL SPECIES 2 ENSGT00940000163570.e.a #8 ENSGT00940000155173.f.b.a ##10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000165990.b ENSGT00940000165990.a ENSGT00940000162562.A.a.a.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Mus ANCESTRAL SPECIES 3 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00520000058517 ENSGT00940000161273 #18 ENSGT00940000165990.b ENSGT00940000165990.a ENSGT00940000162562.A.a.a.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.b #19 ENSGT00940000164707.a #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Mus_A ANCESTRAL SPECIES 3 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00520000058517 ENSGT00940000161273 #18 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.b #19 ENSGT00940000164707.a #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Mus_B ANCESTRAL SPECIES 5 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00520000058517 ENSGT00940000161273 #18 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.b #19 ENSGT00940000164707.a #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Mouse MODERN SPECIES 13 Cmpk1 (ENSMUSG00000028719) #15 Foxe3 (ENSMUSG00000044518) #16 Foxd2 (ENSMUSG00000055210) #17 Trabd2b (ENSMUSG00000070867) #18 Skint11 (ENSMUSG00000057977) Skint5 (ENSMUSG00000078598) #21 Skint6 (ENSMUSG00000087194) #21 Skint10 (ENSMUSG00000048766) Skint2 (ENSMUSG00000034359) #21 Skint9 (ENSMUSG00000049972) Skint3 (ENSMUSG00000070868) #21 Skint4 (ENSMUSG00000055960) #21 Skint1 (ENSMUSG00000089773) #21 Skint7 (ENSMUSG00000049214) #19 Skint8 (ENSMUSG00000078599) #19 Slc5a9 (ENSMUSG00000028544) #22 Spata6 (ENSMUSG00000034401) #23 Bend5 (ENSMUSG00000028545) #25 Agbl4 (ENSMUSG00000061298) #24 Elavl4 (ENSMUSG00000028546) Dmrta2 (ENSMUSG00000047143) Faf1 (ENSMUSG00000010517) Cdkn2c (ENSMUSG00000028551) 4930522H14Rik (ENSMUSG00000060491) Rnf11 (ENSMUSG00000028557) Ttc39a (ENSMUSG00000028555) Eps15 (ENSMUSG00000028552) Calr4 (ENSMUSG00000028558) Osbpl9 (ENSMUSG00000028559) Nrd1 (ENSMUSG00000053510) Rab3b (ENSMUSG00000003411) Mus_C ANCESTRAL SPECIES 2 ENSGT00940000155173.f.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00520000058517 ENSGT00940000161273 #18 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b #21 ENSGT00940000162562.A.a.b #21 ENSGT00940000164707.b #19 ENSGT00940000164707.a #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Steppe mouse MODERN SPECIES 2915 Skint10 (ENSMSIG00000021774) ENSMSIG00000021762 Skint2 (ENSMSIG00000021704) #21 Skint1 (ENSMSIG00000021668) #21 Skint7 (ENSMSIG00000021632) #19 Skint8 (ENSMSIG00000021608) #19 Slc5a9 (ENSMSIG00000021541) #22 Spata6 (ENSMSIG00000021393) #23 ENSMSIG00000021353 #25 spretus MODERN SPECIES 13 Cyp4x1 (MGP_SPRETEiJ_G0027278) #11 Pdzk1ip1 (MGP_SPRETEiJ_G0027277) #12 Tal1 (MGP_SPRETEiJ_G0027276) #13 Stil (MGP_SPRETEiJ_G0027275) #14 Cmpk1 (MGP_SPRETEiJ_G0027274) #15 Foxe3 (MGP_SPRETEiJ_G0027273) #16 Foxd2 (MGP_SPRETEiJ_G0027272) #17 MGP_SPRETEiJ_G0027271 Trabd2b (MGP_SPRETEiJ_G0027270) #18 MGP_SPRETEiJ_G0027269 Skint10 (MGP_SPRETEiJ_G0027267) Skint2 (MGP_SPRETEiJ_G0027266) #21 Skint1 (MGP_SPRETEiJ_G0027265) #21 MGP_SPRETEiJ_G0027264 #19 Skint7 (MGP_SPRETEiJ_G0027263) #19 Slc5a9 (MGP_SPRETEiJ_G0027262) #22 Spata6 (MGP_SPRETEiJ_G0027261) #23 Bend5 (MGP_SPRETEiJ_G0027260) #25 Agbl4 (MGP_SPRETEiJ_G0027259) #24 Elavl4 (MGP_SPRETEiJ_G0027258) Dmrta2 (MGP_SPRETEiJ_G0027257) Faf1 (MGP_SPRETEiJ_G0027256) Cdkn2c (MGP_SPRETEiJ_G0027255) 4930522H14Rik (MGP_SPRETEiJ_G0027254) Rnf11 (MGP_SPRETEiJ_G0027253) Ttc39a (MGP_SPRETEiJ_G0027252) Eps15 (MGP_SPRETEiJ_G0027251) Calr4 (MGP_SPRETEiJ_G0027250) Osbpl9 (MGP_SPRETEiJ_G0027249) Nrd1 (MGP_SPRETEiJ_G0027248) Rab3b (MGP_SPRETEiJ_G0027247) Ryukyu mouse MODERN SPECIES 13 MGP_CAROLIEiJ_G0026309 ##10 MGP_CAROLIEiJ_G0026308 ##10 Cyp4a29 (MGP_CAROLIEiJ_G0026307) #10 Cyp4x1 (MGP_CAROLIEiJ_G0026306) #11 MGP_CAROLIEiJ_G0026305 #12 Tal1 (MGP_CAROLIEiJ_G0026304) #13 Stil (MGP_CAROLIEiJ_G0026303) #14 Cmpk1 (MGP_CAROLIEiJ_G0026302) #15 Foxe3 (MGP_CAROLIEiJ_G0026301) #16 Foxd2 (MGP_CAROLIEiJ_G0026300) #17 Trabd2b (MGP_CAROLIEiJ_G0026299) #18 Skint10 (MGP_CAROLIEiJ_G0026298) MGP_CAROLIEiJ_G0026297 #21 Skint1 (MGP_CAROLIEiJ_G0026296) #21 MGP_CAROLIEiJ_G0026294 #19 Slc5a9 (MGP_CAROLIEiJ_G0026293) #22 Spata6 (MGP_CAROLIEiJ_G0026292) #23 Bend5 (MGP_CAROLIEiJ_G0026291) #25 Agbl4 (MGP_CAROLIEiJ_G0026290) #24 Elavl4 (MGP_CAROLIEiJ_G0026289) Dmrta2 (MGP_CAROLIEiJ_G0026288) Faf1 (MGP_CAROLIEiJ_G0026287) Cdkn2c (MGP_CAROLIEiJ_G0026286) 4930522H14Rik (MGP_CAROLIEiJ_G0026285) Rnf11 (MGP_CAROLIEiJ_G0026284) Ttc39a (MGP_CAROLIEiJ_G0026283) Eps15 (MGP_CAROLIEiJ_G0026282) MGP_CAROLIEiJ_G0026281 Osbpl9 (MGP_CAROLIEiJ_G0026280) Nrd1 (MGP_CAROLIEiJ_G0026279) Rab3b (MGP_CAROLIEiJ_G0026278) Shrew mouse MODERN SPECIES 19 Cyp4a29 (MGP_PahariEiJ_G0028641) #10 Cyp4x1 (MGP_PahariEiJ_G0028640) #11 MGP_PahariEiJ_G0028639 #12 Tal1 (MGP_PahariEiJ_G0028638) #13 Stil (MGP_PahariEiJ_G0028637) #14 Cmpk1 (MGP_PahariEiJ_G0028636) #15 Foxe3 (MGP_PahariEiJ_G0028635) #16 Foxd2 (MGP_PahariEiJ_G0028634) #17 MGP_PahariEiJ_G0028633 Trabd2b (MGP_PahariEiJ_G0028632) #18 MGP_PahariEiJ_G0028631 MGP_PahariEiJ_G0028630 #21 Skint1 (MGP_PahariEiJ_G0028629) #21 MGP_PahariEiJ_G0028628 #19 MGP_PahariEiJ_G0028627 #19 Slc5a9 (MGP_PahariEiJ_G0028626) #22 Spata6 (MGP_PahariEiJ_G0028625) #23 Bend5 (MGP_PahariEiJ_G0028624) #25 Agbl4 (MGP_PahariEiJ_G0028623) #24 Elavl4 (MGP_PahariEiJ_G0028622) Dmrta2 (MGP_PahariEiJ_G0028621) Faf1 (MGP_PahariEiJ_G0028620) Cdkn2c (MGP_PahariEiJ_G0028619) 4930522H14Rik (MGP_PahariEiJ_G0028618) Rnf11 (MGP_PahariEiJ_G0028617) Ttc39a (MGP_PahariEiJ_G0028616) Eps15 (MGP_PahariEiJ_G0028615) Calr4 (MGP_PahariEiJ_G0028614) Osbpl9 (MGP_PahariEiJ_G0028613) Nrd1 (MGP_PahariEiJ_G0028612) Rab3b (MGP_PahariEiJ_G0028611) Rat MODERN SPECIES 15 Tal1 (ENSRNOG00000025051) #13 Stil (ENSRNOG00000057760) #14 Cmpk1 (ENSRNOG00000007775) #15 Foxe3 (ENSRNOG00000007770) #16 Foxd2 (ENSRNOG00000007759) #17 Trabd2b (ENSRNOG00000029141) #18 Skint10 (ENSRNOG00000022988) LOC100911818 (ENSRNOG00000067091) ENSRNOG00000068199 ENSRNOG00000063781 ENSRNOG00000067562 #21 ENSRNOG00000063827 #21 Skint4 (ENSRNOG00000042047) #21 Skint1 (ENSRNOG00000043194) #21 Skint8 (ENSRNOG00000037680) #19 Slc5a9 (ENSRNOG00000042950) #22 Spata6 (ENSRNOG00000007568) #23 Bend5 (ENSRNOG00000008025) #25 Elavl4 (ENSRNOG00000023601) Dmrta2 (ENSRNOG00000068045) Faf1 (ENSRNOG00000008523) Cdkn2c (ENSRNOG00000008956) LOC689589 (ENSRNOG00000009138) Rnf11 (ENSRNOG00000057589) Ttc39a (ENSRNOG00000047573) Eps15 (ENSRNOG00000010299) Calr4 (ENSRNOG00000037710) Osbpl9 (ENSRNOG00000033593) Nrdc (ENSRNOG00000007111) Rab3b (ENSRNOG00000008001) Kti12 (ENSRNOG00000070073) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1792 ENSNGAG00000013342 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 1419 ENSNGAG00000000613 #22 Kangaroo rat MODERN SPECIES 352 Tex38 (ENSDORG00000006627) Efcab14 (ENSDORG00000006628) Cyp4b1 (ENSDORG00000002018) #7 ENSDORG00000002019 #8 ENSDORG00000024423 ##10 ENSDORG00000028283 ENSDORG00000008850 ##10 ENSDORG00000027207 ##10 Cyp4x1 (ENSDORG00000015306) #11 Pdzk1ip1 (ENSDORG00000004566) #12 Tal1 (ENSDORG00000028266) #13 Stil (ENSDORG00000004571) #14 Cmpk1 (ENSDORG00000004576) #15 Foxd2 (ENSDORG00000028126) #17 Trabd2b (ENSDORG00000023562) #18 Slc5a9 (ENSDORG00000010547) #22 Spata6 (ENSDORG00000010310) #23 Agbl4 (ENSDORG00000012728) #24 Bend5 (ENSDORG00000005815) #25 Elavl4 (ENSDORG00000012729) Dmrta2 (ENSDORG00000015486) Faf1 (ENSDORG00000015487) ENSDORG00000023988 Fpgt (ENSDORG00000028813) Tnni3k (ENSDORG00000010710) ENSDORG00000010715 Cryz (ENSDORG00000002723) ENSDORG00000002718 Lagomorpha ANCESTRAL SPECIES 8 ENSGT00390000008086 ENSGT00400000024146 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00980000201734 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Rabbit MODERN SPECIES 4 TEX38 (ENSOCUG00000006612) EFCAB14 (ENSOCUG00000006616) ENSOCUG00000012284 CYP4B1 (ENSOCUG00000011201) #7 CYP4A5 (ENSOCUG00000025702) #10 ENSOCUG00000034574 ENSOCUG00000034966 CYP4X1 (ENSOCUG00000008267) #11 ENSOCUG00000030697 ENSOCUG00000038723 TAL1 (ENSOCUG00000017248) #13 STIL (ENSOCUG00000013586) #14 CMPK1 (ENSOCUG00000012424) #15 TRABD2B (ENSOCUG00000035774) #18 ENSOCUG00000031714 SLC5A9 (ENSOCUG00000007119) #22 ENSOCUG00000021113 SPATA6 (ENSOCUG00000008704) #23 ENSOCUG00000006460 #24 BEND5 (ENSOCUG00000006471) #25 ENSOCUG00000033406 ##24 ENSOCUG00000011146 ENSOCUG00000023561 ENSOCUG00000035051 ENSOCUG00000031084 ENSOCUG00000029778 ENSOCUG00000030354 ENSOCUG00000037999 ELAVL4 (ENSOCUG00000016262) DMRTA2 (ENSOCUG00000001019) FAF1 (ENSOCUG00000031945) Pika MODERN SPECIES 529 ENSOPRG00000005236 #22 Tree shrew MODERN SPECIES 5369 ENSTBEG00000016723 SLC5A9 (ENSTBEG00000016725) #22 Primates ANCESTRAL SPECIES 4 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Haplorrhini ANCESTRAL SPECIES 1 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Simiiformes ANCESTRAL SPECIES 3 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Catarrhini ANCESTRAL SPECIES 3 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 Hominoidea ANCESTRAL SPECIES 3 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 Hominidae ANCESTRAL SPECIES 3 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504.a ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504.a.b ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000163504.a.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504.a.b ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000163504.b ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 Pan ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504.a.b ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000163504.b ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 Chimpanzee MODERN SPECIES TEX38 (ENSPTRG00000043673) EFCAB14 (ENSPTRG00000000701) CYP4B1 (ENSPTRG00000000702) #7 CYP4A22 (ENSPTRG00000000705) CYP4X1 (ENSPTRG00000000706) #11 CYP4Z1 (ENSPTRG00000000707) #11 ENSPTRG00000000708 PDZK1IP1 (ENSPTRG00000000709) #12 TAL1 (ENSPTRG00000051380) #13 STIL (ENSPTRG00000000711) #14 CMPK1 (ENSPTRG00000000712) #15 FOXE3 (ENSPTRG00000030618) #16 FOXD2 (ENSPTRG00000030617) #17 TRABD2B (ENSPTRG00000052213) #18 ENSPTRG00000043073 #21 SLC5A9 (ENSPTRG00000000716) #22 ENSPTRG00000048491 SPATA6 (ENSPTRG00000000718) #23 AGBL4 (ENSPTRG00000043865) #24 BEND5 (ENSPTRG00000000721) #25 ELAVL4 (ENSPTRG00000000723) ENSPTRG00000051295 ENSPTRG00000051047 DMRTA2 (ENSPTRG00000000724) FAF1 (ENSPTRG00000000725) CDKN2C (ENSPTRG00000000726) C1H1orf185 (ENSPTRG00000030611) ENSPTRG00000046419 RNF11 (ENSPTRG00000041089) TTC39A (ENSPTRG00000000728) EPS15 (ENSPTRG00000000729) Bonobo MODERN SPECIES MOB3C (ENSPPAG00000042553) ENSPPAG00000019361 ATPAF1 (ENSPPAG00000031376) TEX38 (ENSPPAG00000034178) EFCAB14 (ENSPPAG00000043833) CYP4B1 (ENSPPAG00000033977) #7 CYP4A11 (ENSPPAG00000040374) CYP4X1 (ENSPPAG00000034593) #11 CYP4Z1 (ENSPPAG00000033041) #11 CYP4A22 (ENSPPAG00000030867) PDZK1IP1 (ENSPPAG00000032727) #12 TAL1 (ENSPPAG00000033189) #13 STIL (ENSPPAG00000037591) #14 ENSPPAG00000027235 #15 TRABD2B (ENSPPAG00000015081) #18 SLC5A9 (ENSPPAG00000034646) #22 ENSPPAG00000009942 SPATA6 (ENSPPAG00000028728) #23 AGBL4 (ENSPPAG00000033362) #24 BEND5 (ENSPPAG00000040466) #25 ELAVL4 (ENSPPAG00000042402) ENSPPAG00000023840 ENSPPAG00000035672 ENSPPAG00000033541 FAF1 (ENSPPAG00000032838) CDKN2C (ENSPPAG00000038172) C1orf185 (ENSPPAG00000024891) ENSPPAG00000032042 RNF11 (ENSPPAG00000039746) TTC39A (ENSPPAG00000031439) EPS15 (ENSPPAG00000033044) Human MODERN SPECIES ATPAF1 (ENSG00000123472) TEX38 (ENSG00000186118) EFCAB14 (ENSG00000159658) CYP4B1 (ENSG00000142973) #7 CYP4A11 (ENSG00000187048) CYP4X1 (ENSG00000186377) #11 CYP4Z1 (ENSG00000186160) #11 CYP4A22 (ENSG00000162365) PDZK1IP1 (ENSG00000162366) #12 TAL1 (ENSG00000162367) #13 STIL (ENSG00000123473) #14 CMPK1 (ENSG00000162368) #15 FOXE3 (ENSG00000186790) #16 FOXD2 (ENSG00000186564) #17 TRABD2B (ENSG00000269113) #18 SLC5A9 (ENSG00000117834) #22 SPATA6 (ENSG00000132122) #23 AGBL4 (ENSG00000186094) #24 BEND5 (ENSG00000162373) #25 ELAVL4 (ENSG00000162374) DMRTA2 (ENSG00000142700) FAF1 (ENSG00000185104) CDKN2C (ENSG00000123080) C1orf185 (ENSG00000204006) RNF11 (ENSG00000123091) TTC39A (ENSG00000085831) EPS15 (ENSG00000085832) OSBPL9 (ENSG00000117859) NRDC (ENSG00000078618) RAB3B (ENSG00000169213) TXNDC12 (ENSG00000117862) Gorilla MODERN SPECIES ENSGGOG00000037049 ENSGGOG00000024754 TEX38 (ENSGGOG00000026717) EFCAB14 (ENSGGOG00000012677) CYP4B1 (ENSGGOG00000016855) #7 ENSGGOG00000021983 CYP4X1 (ENSGGOG00000000133) #11 ENSGGOG00000001801 #11 ENSGGOG00000015363 PDZK1IP1 (ENSGGOG00000011765) #12 TAL1 (ENSGGOG00000043148) #13 STIL (ENSGGOG00000000512) #14 ENSGGOG00000039974 #15 TRABD2B (ENSGGOG00000037702) #18 ENSGGOG00000044020 #21 SLC5A9 (ENSGGOG00000012140) #22 ENSGGOG00000028320 SPATA6 (ENSGGOG00000001284) #23 AGBL4 (ENSGGOG00000043434) #24 BEND5 (ENSGGOG00000003566) #25 ELAVL4 (ENSGGOG00000000634) ENSGGOG00000024575 ENSGGOG00000013269 FAF1 (ENSGGOG00000013273) CDKN2C (ENSGGOG00000017023) C1orf185 (ENSGGOG00000015902) ENSGGOG00000040829 RNF11 (ENSGGOG00000004919) ENSGGOG00000025934 TTC39A (ENSGGOG00000012965) EPS15 (ENSGGOG00000006160) Orangutan MODERN SPECIES ENSPPYG00000034582 ATPAF1 (ENSPPYG00000001391) TEX38 (ENSPPYG00000001390) EFCAB14 (ENSPPYG00000001389) ENSPPYG00000001388 CYP4B1 (ENSPPYG00000001387) #7 CYP4A22 (ENSPPYG00000001385) CYP4X1 (ENSPPYG00000001384) #11 CYP4Z1 (ENSPPYG00000001386) #11 PDZK1IP1 (ENSPPYG00000001383) #12 ENSPPYG00000035408 #13 STIL (ENSPPYG00000001381) #14 CMPK1 (ENSPPYG00000001380) #15 FOXD2 (ENSPPYG00000001378) #17 TRABD2B (ENSPPYG00000001376) #18 SLC5A9 (ENSPPYG00000001373) #22 SPATA6 (ENSPPYG00000001372) #23 BEND5 (ENSPPYG00000001371) #25 ENSPPYG00000038734 AGBL4 (ENSPPYG00000001368) #24 ELAVL4 (ENSPPYG00000001367) DMRTA2 (ENSPPYG00000001366) FAF1 (ENSPPYG00000029417) CDKN2C (ENSPPYG00000001365) C1orf185 (ENSPPYG00000001364) ENSPPYG00000039022 ENSPPYG00000001362 RNF11 (ENSPPYG00000040291) TTC39A (ENSPPYG00000001360) EPS15 (ENSPPYG00000001359) OSBPL9 (ENSPPYG00000001358) Gibbon MODERN SPECIES 2 DMBX1 (ENSNLEG00000016458) ENSNLEG00000035328 ENSNLEG00000016455 MKNK1 (ENSNLEG00000016447) MOB3C (ENSNLEG00000016442) ENSNLEG00000030967 TEX38 (ENSNLEG00000016440) EFCAB14 (ENSNLEG00000016421) ENSNLEG00000016409 PDZK1IP1 (ENSNLEG00000016402) #12 ENSNLEG00000027215 #13 STIL (ENSNLEG00000016386) #14 ENSNLEG00000016374 #15 ENSNLEG00000016372 #18 ENSNLEG00000034414 #21 SLC5A9 (ENSNLEG00000016351) #22 ENSNLEG00000036336 SPATA6 (ENSNLEG00000016340) #23 AGBL4 (ENSNLEG00000016327) #24 BEND5 (ENSNLEG00000033925) #25 ELAVL4 (ENSNLEG00000016303) ENSNLEG00000032288 ENSNLEG00000027959 FAF1 (ENSNLEG00000016263) CDKN2C (ENSNLEG00000016259) ENSNLEG00000029189 ENSNLEG00000033471 TTC39A (ENSNLEG00000016232) ENSNLEG00000016192 OSBPL9 (ENSNLEG00000016138) NRDC (ENSNLEG00000016067) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00390000016446 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.c ENSGT00940000155173 #10 ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b Cercopithecinae ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.c ENSGT00940000160927.e #11 ENSGT00940000163504.d ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 ENSGT00940000154690.ub.b Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.c.b ENSGT00940000160927.e #11 ENSGT00940000163504.c.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a Macaca ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.c.b ENSGT00940000160927.e #11 ENSGT00940000163504.c.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589.g.b #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a Macaca_a ANCESTRAL SPECIES ENSGT00620000089223 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.c.b ENSGT00940000160927.e #11 ENSGT00940000163504.c.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589.h #15 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.b.b.d ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT01030000238095.a.a.b.b ENSGT00940000163721 ENSGT00950000182917.a.b.a ENSGT00940000154319.u.b.b Crab-eating macaque MODERN SPECIES MOB3C (ENSMFAG00000032003) TEX38 (ENSMFAG00000039763) ENSMFAG00000038571 CYP4B1 (ENSMFAG00000031207) #7 CYP4A11 (ENSMFAG00000032544) CYP4X1 (ENSMFAG00000000631) #11 CYP4A45P (ENSMFAG00000042796) PDZK1IP1 (ENSMFAG00000002324) #12 TAL1 (ENSMFAG00000047639) #13 ENSMFAG00000063835 STIL (ENSMFAG00000024408) #14 ENSMFAG00000035854 #15 TRABD2B (ENSMFAG00000003902) #18 ENSMFAG00000003658 ##21 ENSMFAG00000049065 #21 SLC5A9 (ENSMFAG00000035463) #22 ENSMFAG00000051495 ENSMFAG00000030500 AGBL4 (ENSMFAG00000032630) #24 ELAVL4 (ENSMFAG00000039866) ENSMFAG00000020472 DMRTA2 (ENSMFAG00000062675) FAF1 (ENSMFAG00000031563) CDKN2C (ENSMFAG00000024172) C1orf185 (ENSMFAG00000000049) ENSMFAG00000003545 ENSMFAG00000047249 ENSMFAG00000003664 TTC39A (ENSMFAG00000037823) ENSMFAG00000053090 ENSMFAG00000038258 Rhesus MODERN SPECIES ATPAF1 (ENSMMUG00000004863) TEX38 (ENSMMUG00000004864) ENSMMUG00000056043 CYP4B1 (ENSMMUG00000019873) #7 CYP4A45 (ENSMMUG00000019871) CYP4X1 (ENSMMUG00000018867) #11 CYP4A11 (ENSMMUG00000032143) PDZK1IP1 (ENSMMUG00000061850) #13 STIL (ENSMMUG00000020389) #14 CMPK1 (ENSMMUG00000017375) #15 FOXE3 (ENSMMUG00000064635) #16 FOXD2 (ENSMMUG00000018556) #17 ENSMMUG00000057159 TRABD2B (ENSMMUG00000032139) #18 ENSMMUG00000049296 SLC5A9 (ENSMMUG00000007558) #22 SPATA6 (ENSMMUG00000009282) #23 ENSMMUG00000056990 BEND5 (ENSMMUG00000008828) #24 ELAVL4 (ENSMMUG00000021933) DMRTA2 (ENSMMUG00000052908) FAF1 (ENSMMUG00000019056) CDKN2C (ENSMMUG00000019057) C1H1orf185 (ENSMMUG00000006651) ENSMMUG00000058388 RNF11 (ENSMMUG00000012112) TTC39A (ENSMMUG00000004564) ENSMMUG00000058438 ENSMMUG00000043311 EPS15 (ENSMMUG00000012055) OSBPL9 (ENSMMUG00000004735) Pig-tailed macaque MODERN SPECIES 217 ATPAF1 (ENSMNEG00000039287) TEX38 (ENSMNEG00000036840) EFCAB14 (ENSMNEG00000041371) CYP4B1 (ENSMNEG00000041426) #7 CYP4X1 (ENSMNEG00000024746) #11 ENSMNEG00000026248 PDZK1IP1 (ENSMNEG00000034766) #12 TAL1 (ENSMNEG00000043031) #13 STIL (ENSMNEG00000044743) #14 CMPK1 (ENSMNEG00000037131) #15 FOXE3 (ENSMNEG00000009558) #16 FOXD2 (ENSMNEG00000024922) #17 TRABD2B (ENSMNEG00000028952) #18 ENSMNEG00000023828 ##21 ENSMNEG00000042343 #21 SLC5A9 (ENSMNEG00000028284) #22 SPATA6 (ENSMNEG00000036437) #23 AGBL4 (ENSMNEG00000028894) #24 BEND5 (ENSMNEG00000030902) #25 ENSMNEG00000030170 ELAVL4 (ENSMNEG00000035576) ENSMNEG00000021112 ENSMNEG00000014551 ENSMNEG00000029667 DMRTA2 (ENSMNEG00000036377) FAF1 (ENSMNEG00000029437) CDKN2C (ENSMNEG00000031706) ENSMNEG00000039144 ENSMNEG00000042352 C1orf185 (ENSMNEG00000034636) ENSMNEG00000043444 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.d ENSGT00940000163504.c.b ENSGT00940000155173 #10 ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a Cercopithecinae_d ANCESTRAL SPECIES 191 ENSGT00940000160927.f #11 ENSGT00940000160927.e #11 ENSGT00940000155173 #10 ENSGT00940000163504.c.b ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 Sooty mangabey MODERN SPECIES 360 CYP4Z1 (ENSCATG00000033296) #11 CYP4X1 (ENSCATG00000037770) #11 CYP4A11 (ENSCATG00000037461) PDZK1IP1 (ENSCATG00000037237) #12 TAL1 (ENSCATG00000015002) #13 STIL (ENSCATG00000034015) #14 CMPK1 (ENSCATG00000013741) #15 FOXE3 (ENSCATG00000043314) #16 FOXD2 (ENSCATG00000024535) #17 TRABD2B (ENSCATG00000006160) #18 ENSCATG00000002046 #21 SLC5A9 (ENSCATG00000003291) #22 SPATA6 (ENSCATG00000012461) #23 AGBL4 (ENSCATG00000015277) #24 BEND5 (ENSCATG00000007212) #25 Drill MODERN SPECIES 1345 PDZK1IP1 (ENSMLEG00000034076) #12 TAL1 (ENSMLEG00000042268) #13 STIL (ENSMLEG00000042176) #14 ENSMLEG00000039966 #15 TRABD2B (ENSMLEG00000030749) #18 ENSMLEG00000032370 #21 SLC5A9 (ENSMLEG00000034147) #22 SPATA6 (ENSMLEG00000030668) #23 Vervet Monkey MODERN SPECIES 12 EFCAB14 (ENSCSAG00000001241) CYP4B1 (ENSCSAG00000001242) #7 ENSCSAG00000001243 CYP4X1 (ENSCSAG00000001244) #11 CYP4A22 (ENSCSAG00000001245) ENSCSAG00000000142 PDZK1IP1 (ENSCSAG00000001246) #12 TAL1 (ENSCSAG00000001247) #13 STIL (ENSCSAG00000001248) #14 CMPK1 (ENSCSAG00000001249) #15 FOXE3 (ENSCSAG00000000143) #16 FOXD2 (ENSCSAG00000000144) #17 TRABD2B (ENSCSAG00000001250) #18 ENSCSAG00000001251 ##21 ENSCSAG00000001252 #21 SLC5A9 (ENSCSAG00000001253) #22 SPATA6 (ENSCSAG00000001254) #23 ENSCSAG00000001255 #24 BEND5 (ENSCSAG00000001256) #25 ELAVL4 (ENSCSAG00000001257) ENSCSAG00000001258 DMRTA2 (ENSCSAG00000001259) FAF1 (ENSCSAG00000001260) CDKN2C (ENSCSAG00000001261) C1orf185 (ENSCSAG00000001262) RNF11 (ENSCSAG00000001264) TTC39A (ENSCSAG00000001265) EPS15 (ENSCSAG00000001266) OSBPL9 (ENSCSAG00000001267) NRDC (ENSCSAG00000001268) RAB3B (ENSCSAG00000001269) Rhinopithecus ANCESTRAL SPECIES 172 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00620000089223 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196.e ENSGT00940000161441 #7 ENSGT00940000163504.c ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 Golden snub-nosed monkey MODERN SPECIES 3136 PDZK1IP1 (ENSRROG00000033498) #12 TAL1 (ENSRROG00000039099) #13 STIL (ENSRROG00000030013) #14 CMPK1 (ENSRROG00000031992) #15 ENSRROG00000010148 ENSRROG00000026568 TRABD2B (ENSRROG00000044560) #18 ENSRROG00000036867 ENSRROG00000039977 #21 SLC5A9 (ENSRROG00000044270) #22 ENSRROG00000037228 #23 Black snub-nosed monkey MODERN SPECIES 220 ENSRBIG00000044514 ENSRBIG00000040965 ##21 ENSRBIG00000040410 #21 SLC5A9 (ENSRBIG00000010075) #22 SPATA6 (ENSRBIG00000038558) #23 BEND5 (ENSRBIG00000036850) #25 AGBL4 (ENSRBIG00000036871) #24 Platyrrhini ANCESTRAL SPECIES ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Cebidae ANCESTRAL SPECIES 1 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Cebidae_a ANCESTRAL SPECIES ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000160927.f #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Bolivian squirrel monkey MODERN SPECIES 45 ENSSBOG00000022409 SV2B (ENSSBOG00000023396) SLCO3A1 (ENSSBOG00000031641) ST8SIA2 (ENSSBOG00000023341) ENSSBOG00000000134 ENSSBOG00000033087 CHD2 (ENSSBOG00000023754) RGMA (ENSSBOG00000023291) MCTP2 (ENSSBOG00000029271) NR2F2 (ENSSBOG00000020466) ENSSBOG00000035852 PDZK1IP1 (ENSSBOG00000033779) #12 STIL (ENSSBOG00000035433) #14 CMPK1 (ENSSBOG00000023132) #15 TRABD2B (ENSSBOG00000021713) #18 SLC5A9 (ENSSBOG00000031062) #22 ENSSBOG00000034864 SPATA6 (ENSSBOG00000026364) #23 BEND5 (ENSSBOG00000015358) #25 AGBL4 (ENSSBOG00000031864) #24 ELAVL4 (ENSSBOG00000022965) DMRTA2 (ENSSBOG00000025121) ENSSBOG00000029666 ENSSBOG00000035179 ENSSBOG00000031899 ENSSBOG00000024407 ENSSBOG00000021083 FAF1 (ENSSBOG00000035904) CDKN2C (ENSSBOG00000035100) C1orf185 (ENSSBOG00000034584) RNF11 (ENSSBOG00000029247) Capuchin MODERN SPECIES 430 CMPK1 (ENSCCAG00000013287) #15 FOXE3 (ENSCCAG00000018685) #16 FOXD2 (ENSCCAG00000031918) #17 TRABD2B (ENSCCAG00000023756) #18 SLC5A9 (ENSCCAG00000024082) #22 SPATA6 (ENSCCAG00000025511) #23 ENSCCAG00000025907 AGBL4 (ENSCCAG00000026572) #24 BEND5 (ENSCCAG00000027560) #25 ENSCCAG00000028237 Marmoset MODERN SPECIES 19 MOB3C (ENSCJAG00000021158) ATPAF1 (ENSCJAG00000070547) TEX38 (ENSCJAG00000021163) EFCAB14 (ENSCJAG00000046008) CYP4X1 (ENSCJAG00000043987) #11 ENSCJAG00000062966 ENSCJAG00000083949 PDZK1IP1 (ENSCJAG00000046011) #12 TAL1 (ENSCJAG00000053562) #13 STIL (ENSCJAG00000021228) #14 CMPK1 (ENSCJAG00000021250) #15 FOXE3 (ENSCJAG00000038878) #16 FOXD2 (ENSCJAG00000021263) #17 ENSCJAG00000071656 TRABD2B (ENSCJAG00000042725) #18 SLC5A9 (ENSCJAG00000021271) #22 SPATA6 (ENSCJAG00000039778) #23 ENSCJAG00000081866 BEND5 (ENSCJAG00000021284) #25 ENSCJAG00000078422 ELAVL4 (ENSCJAG00000013725) FAF1 (ENSCJAG00000021555) DMRTA2 (ENSCJAG00000041134) CDKN2C (ENSCJAG00000060144) ENSCJAG00000076266 ENSCJAG00000081094 C1orf185 (ENSCJAG00000021565) ENSCJAG00000077996 RNF11 (ENSCJAG00000071727) TTC39A (ENSCJAG00000021569) EPS15 (ENSCJAG00000021570) Mas night monkey MODERN SPECIES 679 MKNK1 (ENSANAG00000022817) MOB3C (ENSANAG00000036313) ATPAF1 (ENSANAG00000033472) TEX38 (ENSANAG00000022553) EFCAB14 (ENSANAG00000023693) CYP4A11 (ENSANAG00000019404) ENSANAG00000035850 CYP4X1 (ENSANAG00000034247) #11 CYP4Z1 (ENSANAG00000032825) #11 PDZK1IP1 (ENSANAG00000037310) #12 TAL1 (ENSANAG00000018338) #13 STIL (ENSANAG00000025280) #14 CMPK1 (ENSANAG00000033187) #15 FOXE3 (ENSANAG00000019840) #16 TRABD2B (ENSANAG00000036722) #18 SLC5A9 (ENSANAG00000022766) #22 SPATA6 (ENSANAG00000033722) #23 BEND5 (ENSANAG00000018794) #25 AGBL4 (ENSANAG00000022272) #24 ENSANAG00000031055 ELAVL4 (ENSANAG00000030598) DMRTA2 (ENSANAG00000033164) ENSANAG00000022650 ENSANAG00000028980 ENSANAG00000028849 FAF1 (ENSANAG00000033702) ENSANAG00000023034 ENSANAG00000037373 CDKN2C (ENSANAG00000033643) ENSANAG00000031477 ENSANAG00000037551 Tarsier MODERN SPECIES 4260 SLC5A9 (ENSTSYG00000008041) #22 ENSTSYG00000033425 SPATA6 (ENSTSYG00000004949) #23 AGBL4 (ENSTSYG00000002596) #24 BEND5 (ENSTSYG00000007521) #25 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Lemuriformes ANCESTRAL SPECIES ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Lemuriformes_a ANCESTRAL SPECIES 20 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000160927.e #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Greater bamboo lemur MODERN SPECIES 358 ENSPSMG00000013339 MOB3C (ENSPSMG00000013309) ATPAF1 (ENSPSMG00000013241) TEX38 (ENSPSMG00000013186) EFCAB14 (ENSPSMG00000013162) CYP4B1 (ENSPSMG00000013132) #7 ENSPSMG00000013059 CYP4X1 (ENSPSMG00000013014) #11 PDZK1IP1 (ENSPSMG00000013009) #12 TAL1 (ENSPSMG00000013005) #13 STIL (ENSPSMG00000012951) #14 CMPK1 (ENSPSMG00000012868) #15 FOXE3 (ENSPSMG00000012832) #16 FOXD2 (ENSPSMG00000012827) #17 TRABD2B (ENSPSMG00000012821) #18 SLC5A9 (ENSPSMG00000012801) #22 ENSPSMG00000012764 SPATA6 (ENSPSMG00000012753) #23 Coquerels sifaka MODERN SPECIES 162 SLC5A9 (ENSPCOG00000004667) #22 SPATA6 (ENSPCOG00000008715) #23 BEND5 (ENSPCOG00000023490) #25 AGBL4 (ENSPCOG00000019895) #24 ELAVL4 (ENSPCOG00000024957) DMRTA2 (ENSPCOG00000028074) ENSPCOG00000028658 FAF1 (ENSPCOG00000025141) CDKN2C (ENSPCOG00000019258) ENSPCOG00000026759 C1orf185 (ENSPCOG00000025481) RNF11 (ENSPCOG00000015322) TTC39A (ENSPCOG00000018198) ENSPCOG00000012900 OSBPL9 (ENSPCOG00000027695) NRDC (ENSPCOG00000024524) Mouse lemur MODERN SPECIES 11 KNCN (ENSMICG00000037994) ENSMICG00000000071 ATPAF1 (ENSMICG00000000075) TEX38 (ENSMICG00000000074) EFCAB14 (ENSMICG00000047159) CYP4A11 (ENSMICG00000000965) ENSMICG00000031270 CYP4B1 (ENSMICG00000000962) #7 PDZK1IP1 (ENSMICG00000043731) #12 TAL1 (ENSMICG00000045732) #13 STIL (ENSMICG00000005402) #14 CMPK1 (ENSMICG00000005386) #15 FOXE3 (ENSMICG00000029422) #16 FOXD2 (ENSMICG00000034204) #17 TRABD2B (ENSMICG00000033266) #18 SLC5A9 (ENSMICG00000012426) #22 SPATA6 (ENSMICG00000003269) #23 BEND5 (ENSMICG00000003282) #25 ENSMICG00000037766 AGBL4 (ENSMICG00000003275) #24 ELAVL4 (ENSMICG00000003286) DMRTA2 (ENSMICG00000044233) FAF1 (ENSMICG00000003299) CDKN2C (ENSMICG00000033935) C1orf185 (ENSMICG00000004061) ENSMICG00000005503 ENSMICG00000047946 TTC39A (ENSMICG00000008377) ENSMICG00000001200 ENSMICG00000044074 ENSMICG00000002731 Bushbaby MODERN SPECIES 274 SLC5A9 (ENSOGAG00000005008) #22 SPATA6 (ENSOGAG00000005014) #23 ENSOGAG00000004600 #24 BEND5 (ENSOGAG00000005779) #25 ENSOGAG00000026942 #24 ELAVL4 (ENSOGAG00000016990) DMRTA2 (ENSOGAG00000026143) ENSOGAG00000033138 FAF1 (ENSOGAG00000003624) CDKN2C (ENSOGAG00000003625) RNF11 (ENSOGAG00000011682) TTC39A (ENSOGAG00000011685) EPS15 (ENSOGAG00000001077) ENSOGAG00000026601 OSBPL9 (ENSOGAG00000003787) ENSOGAG00000003792 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000163504 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000161441.c.b.a #7 ENSGT00940000163504 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Artiodactyla ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Suina ANCESTRAL SPECIES 27 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.g.b #10 ENSGT00940000154660.b.d.b #12 ENSGT00940000155173.g.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b.c #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Chacoan peccary MODERN SPECIES 54 TEX38 (ENSCWAG00000008969) EFCAB14 (ENSCWAG00000008901) CYP4B1 (ENSCWAG00000008498) #7 ENSCWAG00000008145 #10 ENSCWAG00000007884 #10 ENSCWAG00000007782 #10 ENSCWAG00000007685 #11 ENSCWAG00000007625 #11 ENSCWAG00000007601 #12 TAL1 (ENSCWAG00000007586) #13 STIL (ENSCWAG00000007144) #14 CMPK1 (ENSCWAG00000007073) #15 FOXE3 (ENSCWAG00000007053) #16 FOXD2 (ENSCWAG00000007046) #17 TRABD2B (ENSCWAG00000007013) #18 SLC5A9 (ENSCWAG00000006856) #22 SPATA6 (ENSCWAG00000006748) #23 BEND5 (ENSCWAG00000006694) #25 AGBL4 (ENSCWAG00000006528) #24 ELAVL4 (ENSCWAG00000005560) DMRTA2 (ENSCWAG00000005466) FAF1 (ENSCWAG00000005411) CDKN2C (ENSCWAG00000005386) C1orf185 (ENSCWAG00000005324) RNF11 (ENSCWAG00000005303) TTC39A (ENSCWAG00000004869) EPS15 (ENSCWAG00000004768) ENSCWAG00000004705 OSBPL9 (ENSCWAG00000004180) NRDC (ENSCWAG00000003843) RAB3B (ENSCWAG00000003795) Pig MODERN SPECIES 14 ENSSSCG00000003889 #10 ENSSSCG00000061684 #10 ENSSSCG00000062325 #10 CYP4A24 (ENSSSCG00000062158) #10 ENSSSCG00000003892 #10 ENSSSCG00000024129 #11 ENSSSCG00000031778 #11 ENSSSCG00000056639 #10 ENSSSCG00000020872 #12 TAL1 (ENSSSCG00000058056) #13 STIL (ENSSSCG00000003888) #14 CMPK1 (ENSSSCG00000003885) #15 FOXE3 (ENSSSCG00000003884) #16 FOXD2 (ENSSSCG00000034880) #17 TRABD2B (ENSSSCG00000037318) #18 SLC5A9 (ENSSSCG00000003882) #22 SPATA6 (ENSSSCG00000003881) #23 ENSSSCG00000031300 #24 BEND5 (ENSSSCG00000063412) #25 ENSSSCG00000049367 ENSSSCG00000052381 ELAVL4 (ENSSSCG00000037291) DMRTA2 (ENSSSCG00000030552) ENSSSCG00000049732 FAF1 (ENSSSCG00000003877) CDKN2C (ENSSSCG00000003876) C1orf185 (ENSSSCG00000031188) RNF11 (ENSSSCG00000031172) TTC39A (ENSSSCG00000003875) ENSSSCG00000055459 EPS15 (ENSSSCG00000003872) Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Camelidae ANCESTRAL SPECIES 11 ENSGT00940000161237 ENSGT00940000155505.a ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000160927 #11 ENSGT00940000155173 #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Arabian camel MODERN SPECIES 4 FAAH (ENSCDRG00005019005) DMBX1 (ENSCDRG00005019026) KNCN (ENSCDRG00005019056) MKNK1 (ENSCDRG00005019138) MOB3C (ENSCDRG00005019211) ATPAF1 (ENSCDRG00005019231) TEX38 (ENSCDRG00005019244) EFCAB14 (ENSCDRG00005019273) CYP4X1 (ENSCDRG00005019322) #11 ENSCDRG00005019371 #10 ENSCDRG00005019396 #12 TAL1 (ENSCDRG00005019418) #13 STIL (ENSCDRG00005019454) #14 CMPK1 (ENSCDRG00005019485) #15 TRABD2B (ENSCDRG00005003535) #18 SLC5A9 (ENSCDRG00005003621) #22 ENSCDRG00005003726 SPATA6 (ENSCDRG00005003747) #23 AGBL4 (ENSCDRG00005003837) #24 BEND5 (ENSCDRG00005003960) #25 ELAVL4 (ENSCDRG00005004051) DMRTA2 (ENSCDRG00005004641) FAF1 (ENSCDRG00005004702) CDKN2C (ENSCDRG00005004767) C1orf185 (ENSCDRG00005004794) TTC39A (ENSCDRG00005004896) EPS15 (ENSCDRG00005005246) OSBPL9 (ENSCDRG00005005422) NRDC (ENSCDRG00005005602) RAB3B (ENSCDRG00005005964) TXNDC12 (ENSCDRG00005005982) Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Pecora ANCESTRAL SPECIES 2 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.b #10 ENSGT00940000155173.k.a.a.b.a #10 ENSGT00940000155173.k.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.b #10 ENSGT00940000155173.k.a.a.b.a #10 ENSGT00940000155173.k.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Bovidae ANCESTRAL SPECIES 1 ENSGT00940000161441.d #7 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.b #10 ENSGT00940000155173.k.a.a.b.a #10 ENSGT00940000155173.k.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000161441.d #7 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.b #10 ENSGT00940000155173.k.a.a.b.a.c #10 ENSGT00940000155173.k.a.a.b.a.d #10 ENSGT00940000155173.k.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Goat MODERN SPECIES 22 CYP4A41 (ENSCHIG00000013010) #10 ENSCHIG00000017193 #10 ENSCHIG00000002358 ENSCHIG00000022081 #10 CYP4A42 (ENSCHIG00000025289) #10 CYP4X1 (ENSCHIG00000017002) #11 PDZK1IP1 (ENSCHIG00000010100) #12 TAL1 (ENSCHIG00000023704) #13 STIL (ENSCHIG00000018306) #14 CMPK1 (ENSCHIG00000009857) #15 FOXE3 (ENSCHIG00000005171) #16 FOXD2 (ENSCHIG00000000964) #17 ENSCHIG00000008212 TRABD2B (ENSCHIG00000016346) #18 ENSCHIG00000016345 #21 SLC5A9 (ENSCHIG00000008499) #22 SPATA6 (ENSCHIG00000022098) #23 ENSCHIG00000002488 #24 BEND5 (ENSCHIG00000021731) #25 ELAVL4 (ENSCHIG00000002038) DMRTA2 (ENSCHIG00000014219) FAF1 (ENSCHIG00000023469) CDKN2C (ENSCHIG00000018497) C1orf185 (ENSCHIG00000024707) RNF11 (ENSCHIG00000015466) TTC39A (ENSCHIG00000004432) EPS15 (ENSCHIG00000014467) ENSCHIG00000011084 ENSCHIG00000026722 NRDC (ENSCHIG00000018703) ENSCHIG00000015938 Rambouillet Sheep MODERN SPECIES CYP4B1 (ENSOARG00020001284) #7 ENSOARG00020001350 #10 ENSOARG00020001482 #10 ENSOARG00020001546 #10 ENSOARG00020001738 #10 ENSOARG00020001814 #10 CYP4X1 (ENSOARG00020002290) #11 PDZK1IP1 (ENSOARG00020002299) #12 TAL1 (ENSOARG00020002312) #13 STIL (ENSOARG00020002323) #14 CMPK1 (ENSOARG00020002350) #15 FOXE3 (ENSOARG00020002373) #16 FOXD2 (ENSOARG00020002380) #17 TRABD2B (ENSOARG00020002393) #18 ENSOARG00020002415 #21 SLC5A9 (ENSOARG00020002431) #22 SPATA6 (ENSOARG00020002472) #23 ENSOARG00020002510 ENSOARG00020002560 ENSOARG00020002635 ENSOARG00020002674 ENSOARG00020002841 DMRTA2 (ENSOARG00020003462) FAF1 (ENSOARG00020003507) CDKN2C (ENSOARG00020003945) C1orf185 (ENSOARG00020003970) RNF11 (ENSOARG00020004026) TTC39A (ENSOARG00020004078) EPS15 (ENSOARG00020004420) ENSOARG00020005031 OSBPL9 (ENSOARG00020005123) Bovinae ANCESTRAL SPECIES 1 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.a #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831.q.a ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00960000192687 ENSGT00940000154690.q ENSGT00940000155026 American bison MODERN SPECIES 2971 CYP4B1 (ENSBBBG00000009841) #7 ENSBBBG00000009830 #10 ENSBBBG00000007113 #10 CYP4X1 (ENSBBBG00000008137) #11 ENSBBBG00000009802 PDZK1IP1 (ENSBBBG00000009801) #12 ENSBBBG00000001633 #13 STIL (ENSBBBG00000001632) #14 CMPK1 (ENSBBBG00000009782) #15 TRABD2B (ENSBBBG00000009775) #18 ENSBBBG00000009768 ##21 ENSBBBG00000009765 ENSBBBG00000009039 #21 SLC5A9 (ENSBBBG00000009762) #22 SPATA6 (ENSBBBG00000009751) #23 AGBL4 (ENSBBBG00000009737) #24 BEND5 (ENSBBBG00000009734) #25 ENSBBBG00000001599 ELAVL4 (ENSBBBG00000009727) FAF1 (ENSBBBG00000009713) CDKN2C (ENSBBBG00000009704) Bos ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 ENSGT00940000161649 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00960000192687 Bos_b ANCESTRAL SPECIES 1 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.a.a #10 ENSGT00940000155173.k.a.a.b.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 ENSGT00940000161649 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690.q Hybrid Bos Indicus MODERN SPECIES 22 MKNK1 (ENSBIXG00005006328) MOB3C (ENSBIXG00005001231) ATPAF1 (ENSBIXG00005012121) TEX38 (ENSBIXG00005012152) EFCAB14 (ENSBIXG00005012188) CYP4B1 (ENSBIXG00005001270) #7 ENSBIXG00005012345 #10 CYP4X1 (ENSBIXG00005012436) #11 PDZK1IP1 (ENSBIXG00005012472) #12 TAL1 (ENSBIXG00005001347) #13 STIL (ENSBIXG00005001365) #14 CMPK1 (ENSBIXG00005012554) #15 FOXE3 (ENSBIXG00005012567) #16 TRABD2B (ENSBIXG00005012610) #18 ENSBIXG00005012658 #21 SLC5A9 (ENSBIXG00005012722) #22 ENSBIXG00005012739 SPATA6 (ENSBIXG00005012777) #23 BEND5 (ENSBIXG00005012833) #25 ENSBIXG00005001430 AGBL4 (ENSBIXG00005012945) #24 ELAVL4 (ENSBIXG00005013087) ENSBIXG00005013121 DMRTA2 (ENSBIXG00005013129) ENSBIXG00005013142 ENSBIXG00005013185 CDKN2C (ENSBIXG00005013218) C1orf185 (ENSBIXG00005013246) RNF11 (ENSBIXG00005013258) TTC39A (ENSBIXG00005013555) EPS15 (ENSBIXG00005013837) Cow MODERN SPECIES 22 CYP4B1 (ENSBTAG00000011976) #7 ENSBTAG00000050746 CYP4A22 (ENSBTAG00000013481) #10 CYP4A59 (ENSBTAG00000000229) #10 CYP4A11 (ENSBTAG00000037890) #10 CYP4X1 (ENSBTAG00000015647) #11 PDZK1IP1 (ENSBTAG00000002555) #12 TAL1 (ENSBTAG00000005029) #13 STIL (ENSBTAG00000017844) #14 CMPK1 (ENSBTAG00000019956) #15 FOXE3 (ENSBTAG00000051575) #16 FOXD2 (ENSBTAG00000045643) #17 TRABD2B (ENSBTAG00000054324) #18 SKINT1 (ENSBTAG00000009192) #21 ENSBTAG00000054583 #19 SLC5A9 (ENSBTAG00000014225) #22 SPATA6 (ENSBTAG00000003128) #23 ENSBTAG00000012722 #24 BEND5 (ENSBTAG00000009209) #25 ENSBTAG00000053607 ENSBTAG00000054981 #24 ELAVL4 (ENSBTAG00000021046) DMRTA2 (ENSBTAG00000010414) FAF1 (ENSBTAG00000014482) CDKN2C (ENSBTAG00000011059) C3H1orf185 (ENSBTAG00000009674) RNF11 (ENSBTAG00000054545) TTC39A (ENSBTAG00000002451) ENSBTAG00000048722 EPS15 (ENSBTAG00000005542) OSBPL9 (ENSBTAG00000021170) Bos_a ANCESTRAL SPECIES 1 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.k.a.a.a #10 ENSGT00940000155173.k.a.a.b.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00990000203553.c.a.a.a.b ENSGT00940000157399 ENSGT00940000161649 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00960000192687 Wild yak MODERN SPECIES 1383 ENSBMUG00000011572 #19 SLC5A9 (ENSBMUG00000011605) #22 Domestic yak MODERN SPECIES 22 TEX38 (ENSBGRG00000001576) EFCAB14 (ENSBGRG00000001550) CYP4B1 (ENSBGRG00000001457) #7 ENSBGRG00000001400 #10 ENSBGRG00000000995 #10 ENSBGRG00000000946 CYP4X1 (ENSBGRG00000000906) #11 PDZK1IP1 (ENSBGRG00000000884) #12 TAL1 (ENSBGRG00000000873) #13 STIL (ENSBGRG00000000847) #14 CMPK1 (ENSBGRG00000000768) #15 FOXD2 (ENSBGRG00000000734) #17 TRABD2B (ENSBGRG00000000715) #18 ENSBGRG00000000659 #21 ENSBGRG00000000634 #19 SLC5A9 (ENSBGRG00000000471) #22 ENSBGRG00000000443 SPATA6 (ENSBGRG00000000361) #23 ENSBGRG00000000329 BEND5 (ENSBGRG00000000244) #25 ELAVL4 (ENSBGRG00000008303) ENSBGRG00000008263 DMRTA2 (ENSBGRG00000008234) ENSBGRG00000008184 FAF1 (ENSBGRG00000007790) CDKN2C (ENSBGRG00000007727) ENSBGRG00000007699 ENSBGRG00000007678 C1orf185 (ENSBGRG00000007509) ENSBGRG00000007489 RNF11 (ENSBGRG00000007453) Siberian musk deer MODERN SPECIES 340 ENSMMSG00000018425 #10 ENSMMSG00000018047 #10 ENSMMSG00000017943 #10 ENSMMSG00000017845 #10 ENSMMSG00000014713 #10 CYP4X1 (ENSMMSG00000014557) #11 PDZK1IP1 (ENSMMSG00000014540) #12 TAL1 (ENSMMSG00000014528) #13 STIL (ENSMMSG00000014379) #14 ENSMMSG00000014328 #15 FOXE3 (ENSMMSG00000014313) #16 FOXD2 (ENSMMSG00000014302) #17 TRABD2B (ENSMMSG00000014286) #18 ENSMMSG00000014278 ##21 ENSMMSG00000014251 #21 SLC5A9 (ENSMMSG00000014113) #22 SPATA6 (ENSMMSG00000014025) #23 BEND5 (ENSMMSG00000013981) #25 AGBL4 (ENSMMSG00000013891) #24 ELAVL4 (ENSMMSG00000012846) DMRTA2 (ENSMMSG00000012786) ENSMMSG00000012776 FAF1 (ENSMMSG00000012758) CDKN2C (ENSMMSG00000012734) ENSMMSG00000012725 C1orf185 (ENSMMSG00000012641) RNF11 (ENSMMSG00000012629) TTC39A (ENSMMSG00000012294) EPS15 (ENSMMSG00000011662) ENSMMSG00000011598 OSBPL9 (ENSMMSG00000011045) Yarkand deer MODERN SPECIES 12 ENSCHYG00000023760 #10 ENSCHYG00000023627 #10 ENSCHYG00000023374 #10 ENSCHYG00000023298 #10 CYP4X1 (ENSCHYG00000023196) #11 PDZK1IP1 (ENSCHYG00000023171) #12 TAL1 (ENSCHYG00000023140) #13 STIL (ENSCHYG00000023044) #14 CMPK1 (ENSCHYG00000022970) #15 FOXD2 (ENSCHYG00000022949) #17 ENSCHYG00000022932 TRABD2B (ENSCHYG00000022894) #18 ENSCHYG00000022779 ##21 ENSCHYG00000022715 #21 ENSCHYG00000022669 #19 SLC5A9 (ENSCHYG00000022514) #22 SPATA6 (ENSCHYG00000022292) #23 BEND5 (ENSCHYG00000022182) #25 ENSCHYG00000022139 AGBL4 (ENSCHYG00000021988) #24 ELAVL4 (ENSCHYG00000021125) ENSCHYG00000020992 FAF1 (ENSCHYG00000020360) CDKN2C (ENSCHYG00000020293) C1orf185 (ENSCHYG00000020169) RNF11 (ENSCHYG00000020010) TTC39A (ENSCHYG00000019043) EPS15 (ENSCHYG00000018363) ENSCHYG00000018015 ENSCHYG00000016631 ENSCHYG00000016488 Cetacea ANCESTRAL SPECIES ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00950000182958.a.b.b.j.l ENSGT00940000155173.i.a #10 ENSGT00940000160927 #11 ENSGT00940000155173.j #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Odontoceti ANCESTRAL SPECIES ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00950000182958.a.b.b.j.l ENSGT00940000155173.j #10 ENSGT00940000160927 #11 ENSGT00940000155173.i.a #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000155339.r ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000155173.j.a #10 ENSGT00940000160927 #11 ENSGT00940000155173.i.a #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000153412.A.a.c.e.b ENSGT00940000161273 #18 ENSGT00940000155339.r ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Odontoceti_b ANCESTRAL SPECIES ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000155173.i.b #10 ENSGT00940000161441.c.b.a #7 ENSGT00940000163504 ENSGT00940000155173.i.a #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000155339.r ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Monodontidae ANCESTRAL SPECIES ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000155173.i.b #10 ENSGT00940000161441.c.b.a #7 ENSGT00940000163504 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000153412.A.a.c.e.b ENSGT00940000161273 #18 ENSGT00940000155339.r ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Narwhal MODERN SPECIES 304 ATPAF1 (ENSMMNG00015017841) TEX38 (ENSMMNG00015017799) EFCAB14 (ENSMMNG00015017756) ENSMMNG00015017717 #10 ENSMMNG00015017692 #7 ENSMMNG00015017646 PDZK1IP1 (ENSMMNG00015017600) #12 TAL1 (ENSMMNG00015017573) #13 STIL (ENSMMNG00015017497) #14 CMPK1 (ENSMMNG00015017341) #15 FOXE3 (ENSMMNG00015017301) #16 FOXD2 (ENSMMNG00015017290) #17 ENSMMNG00015017274 TRABD2B (ENSMMNG00015017248) #18 ENSMMNG00015017223 SLC5A9 (ENSMMNG00015017189) #22 SPATA6 (ENSMMNG00015017114) #23 BEND5 (ENSMMNG00015017067) #25 ENSMMNG00015017042 AGBL4 (ENSMMNG00015016854) #24 ELAVL4 (ENSMMNG00015016468) DMRTA2 (ENSMMNG00015016305) FAF1 (ENSMMNG00015016261) CDKN2C (ENSMMNG00015016226) ENSMMNG00015016200 RNF11 (ENSMMNG00015016177) TTC39A (ENSMMNG00015015942) EPS15 (ENSMMNG00015015790) ENSMMNG00015015722 OSBPL9 (ENSMMNG00015015491) NRDC (ENSMMNG00015015338) Beluga whale MODERN SPECIES 74 ATPAF1 (ENSDLEG00000014541) TEX38 (ENSDLEG00000014565) EFCAB14 (ENSDLEG00000014585) ENSDLEG00000014626 #7 ENSDLEG00000014649 #7 PDZK1IP1 (ENSDLEG00000014775) #12 TAL1 (ENSDLEG00000014787) #13 STIL (ENSDLEG00000014810) #14 CMPK1 (ENSDLEG00000014989) #15 FOXE3 (ENSDLEG00000015041) #16 FOXD2 (ENSDLEG00000015047) #17 ENSDLEG00000015052 TRABD2B (ENSDLEG00000015057) #18 ENSDLEG00000015069 ENSDLEG00000015073 SLC5A9 (ENSDLEG00000015091) #22 SPATA6 (ENSDLEG00000015119) #23 AGBL4 (ENSDLEG00000015168) #24 BEND5 (ENSDLEG00000015199) #25 ENSDLEG00000015227 ENSDLEG00000015238 #24 ELAVL4 (ENSDLEG00000015258) DMRTA2 (ENSDLEG00000016008) FAF1 (ENSDLEG00000016028) CDKN2C (ENSDLEG00000016125) C1orf185 (ENSDLEG00000016132) RNF11 (ENSDLEG00000016174) TTC39A (ENSDLEG00000016187) EPS15 (ENSDLEG00000016250) ENSDLEG00000016334 OSBPL9 (ENSDLEG00000016465) Vaquita MODERN SPECIES TEX38 (ENSPSNG00000007691) EFCAB14 (ENSPSNG00000007725) ENSPSNG00000007825 #10 ENSPSNG00000008156 #10 ENSPSNG00000008408 #10 ENSPSNG00000008499 #10 PDZK1IP1 (ENSPSNG00000008584) #12 TAL1 (ENSPSNG00000008617) #13 STIL (ENSPSNG00000008673) #14 CMPK1 (ENSPSNG00000008760) #15 FOXE3 (ENSPSNG00000008840) #16 FOXD2 (ENSPSNG00000008853) #17 TRABD2B (ENSPSNG00000008890) #18 ENSPSNG00000008955 ENSPSNG00000008987 SLC5A9 (ENSPSNG00000009041) #22 SPATA6 (ENSPSNG00000009229) #23 AGBL4 (ENSPSNG00000009355) #24 BEND5 (ENSPSNG00000009518) #25 ENSPSNG00000009540 ELAVL4 (ENSPSNG00000009710) DMRTA2 (ENSPSNG00000010437) FAF1 (ENSPSNG00000010473) CDKN2C (ENSPSNG00000010560) ENSPSNG00000010600 C1orf185 (ENSPSNG00000010619) RNF11 (ENSPSNG00000010799) TTC39A (ENSPSNG00000010892) EPS15 (ENSPSNG00000011562) ENSPSNG00000011761 NRDC (ENSPSNG00000012358) Dolphin MODERN SPECIES 2874 ENSTTRG00000012352 #21 SLC5A9 (ENSTTRG00000012358) #22 SPATA6 (ENSTTRG00000012366) #23 AGBL4 (ENSTTRG00000012384) #24 BEND5 (ENSTTRG00000012397) #25 ELAVL4 (ENSTTRG00000012441) Sperm whale MODERN SPECIES 15 ATPAF1 (ENSPCTG00005016892) TEX38 (ENSPCTG00005016811) EFCAB14 (ENSPCTG00005016666) ENSPCTG00005016621 ENSPCTG00005016599 CYP4B1 (ENSPCTG00005016063) #7 ENSPCTG00005015607 #10 ENSPCTG00005014892 #10 PDZK1IP1 (ENSPCTG00005014810) #12 TAL1 (ENSPCTG00005014754) #13 STIL (ENSPCTG00005014632) #14 CMPK1 (ENSPCTG00005014484) #15 FOXE3 (ENSPCTG00005014461) #16 ENSPCTG00005014432 ENSPCTG00005014378 SLC5A9 (ENSPCTG00005013780) #22 SPATA6 (ENSPCTG00005013649) #23 AGBL4 (ENSPCTG00005013528) #24 BEND5 (ENSPCTG00005013421) #25 ENSPCTG00005013401 ENSPCTG00005013384 ELAVL4 (ENSPCTG00005012489) ENSPCTG00005012390 #24 FAF1 (ENSPCTG00005012310) CDKN2C (ENSPCTG00005012278) ENSPCTG00005012230 RNF11 (ENSPCTG00005012191) TTC39A (ENSPCTG00005011838) EPS15 (ENSPCTG00005011544) ENSPCTG00005011404 OSBPL9 (ENSPCTG00005010621) Blue whale MODERN SPECIES TEX38 (ENSBMSG00010004896) EFCAB14 (ENSBMSG00010004906) ENSBMSG00010004918 ENSBMSG00010004923 ENSBMSG00010004944 #7 ENSBMSG00010005002 #10 ENSBMSG00010005028 #7 ENSBMSG00010005054 #10 PDZK1IP1 (ENSBMSG00010005121) #12 TAL1 (ENSBMSG00010005132) #13 STIL (ENSBMSG00010005150) #14 CMPK1 (ENSBMSG00010005177) #15 FOXE3 (ENSBMSG00010005194) #16 ENSBMSG00010005215 TRABD2B (ENSBMSG00010005224) #18 SLC5A9 (ENSBMSG00010005258) #22 SPATA6 (ENSBMSG00010005335) #23 AGBL4 (ENSBMSG00010005358) #24 BEND5 (ENSBMSG00010005413) #25 ENSBMSG00010005423 ELAVL4 (ENSBMSG00010005482) DMRTA2 (ENSBMSG00010005622) FAF1 (ENSBMSG00010005636) CDKN2C (ENSBMSG00010005658) C1orf185 (ENSBMSG00010005668) RNF11 (ENSBMSG00010005680) TTC39A (ENSBMSG00010005702) EPS15 (ENSBMSG00010005767) ENSBMSG00010005842 NRDC (ENSBMSG00010005952) RAB3B (ENSBMSG00010005996) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Carnivora ANCESTRAL SPECIES 1 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 Caniformia ANCESTRAL SPECIES 2 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00940000155505.a ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000161273 #18 ENSGT00940000157546.g #22 ENSGT00940000157546.h #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT01010000229967 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 Giant Panda MODERN SPECIES 11 DMBX1 (ENSAMEG00000014000) KNCN (ENSAMEG00000014006) MKNK1 (ENSAMEG00000014008) ENSAMEG00000014047 ENSAMEG00000025041 TEX38 (ENSAMEG00000020215) EFCAB14 (ENSAMEG00000014050) CYP4B1 (ENSAMEG00000014075) #7 ENSAMEG00000029837 #10 CYP4X1 (ENSAMEG00000000016) #11 PDZK1IP1 (ENSAMEG00000024007) #12 TAL1 (ENSAMEG00000029725) #13 STIL (ENSAMEG00000000013) #14 CMPK1 (ENSAMEG00000000012) #15 TRABD2B (ENSAMEG00000018869) #18 SLC5A9 (ENSAMEG00000008581) #22 SPATA6 (ENSAMEG00000008559) #23 AGBL4 (ENSAMEG00000009391) #24 BEND5 (ENSAMEG00000009379) #25 ELAVL4 (ENSAMEG00000017455) ENSAMEG00000029933 DMRTA2 (ENSAMEG00000026233) FAF1 (ENSAMEG00000017472) ENSAMEG00000031167 CDKN2C (ENSAMEG00000028782) C1orf185 (ENSAMEG00000024320) RNF11 (ENSAMEG00000017484) TTC39A (ENSAMEG00000017488) EPS15 (ENSAMEG00000017515) OSBPL9 (ENSAMEG00000008968) NRDC (ENSAMEG00000009034) Ursus ANCESTRAL SPECIES ENSGT00940000157546.g #22 American black bear MODERN SPECIES 8013 ENSUAMG00000011795 #22 Ursidae ANCESTRAL SPECIES ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000161273 #18 ENSGT00940000157546.g #22 ENSGT00940000157546.h #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT01010000229967 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Ursus ANCESTRAL SPECIES 19 ENSGT00940000161237 ENSGT00940000163316 ENSGT00940000155505.a ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157546.h #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 ENSGT00530000063273.a ENSGT00940000154296 American black bear MODERN SPECIES 5712 ENSUAMG00000003748 #22 Polar bear MODERN SPECIES 218 FAAH (ENSUMAG00000023571) ENSUMAG00000023566 DMBX1 (ENSUMAG00000023564) KNCN (ENSUMAG00000023562) MKNK1 (ENSUMAG00000023560) MOB3C (ENSUMAG00000023559) ATPAF1 (ENSUMAG00000023558) TEX38 (ENSUMAG00000023557) EFCAB14 (ENSUMAG00000023556) CYP4B1 (ENSUMAG00000023554) #7 ENSUMAG00000023368 #10 CYP4X1 (ENSUMAG00000023337) #11 PDZK1IP1 (ENSUMAG00000023333) #12 STIL (ENSUMAG00000023306) #14 CMPK1 (ENSUMAG00000023298) #15 ENSUMAG00000023291 #22 SPATA6 (ENSUMAG00000023285) #23 ENSUMAG00000023284 #24 ENSUMAG00000023282 #25 ENSUMAG00000023280 ELAVL4 (ENSUMAG00000023149) ENSUMAG00000023107 ENSUMAG00000023105 FAF1 (ENSUMAG00000023099) CDKN2C (ENSUMAG00000023096) C1orf185 (ENSUMAG00000023093) RNF11 (ENSUMAG00000023091) TTC39A (ENSUMAG00000023064) EPS15 (ENSUMAG00000022892) OSBPL9 (ENSUMAG00000022814) NRDC (ENSUMAG00000022809) Mustelinae ANCESTRAL SPECIES ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m.c.a.a.a #10 ENSGT00940000155173.m.c.a.b #10 ENSGT00940000155173.m.c.b #10 ENSGT00940000155173.m.d #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 American mink MODERN SPECIES 344 ENSNVIG00000001905 #10 ENSNVIG00000002014 #10 CYP4X1 (ENSNVIG00000002045) #11 PDZK1IP1 (ENSNVIG00000002077) #12 TAL1 (ENSNVIG00000002084) #13 STIL (ENSNVIG00000002103) #14 CMPK1 (ENSNVIG00000002204) #15 FOXD2 (ENSNVIG00000002242) #17 TRABD2B (ENSNVIG00000002254) #18 SLC5A9 (ENSNVIG00000002273) #22 SPATA6 (ENSNVIG00000002346) #23 ENSNVIG00000002411 #24 BEND5 (ENSNVIG00000002432) #25 Ferret MODERN SPECIES 167 ATPAF1 (ENSMPUG00000012737) TEX38 (ENSMPUG00000018579) EFCAB14 (ENSMPUG00000012730) CYP4B1 (ENSMPUG00000012724) #7 ENSMPUG00000012694 #10 ENSMPUG00000012515 #10 ENSMPUG00000012510 #10 ENSMPUG00000012443 #10 CYP4X1 (ENSMPUG00000012436) #11 PDZK1IP1 (ENSMPUG00000012421) #12 TAL1 (ENSMPUG00000012410) #13 STIL (ENSMPUG00000012399) #14 CMPK1 (ENSMPUG00000012394) #15 ENSMPUG00000012391 TRABD2B (ENSMPUG00000012386) #18 SLC5A9 (ENSMPUG00000012383) #22 SPATA6 (ENSMPUG00000012355) #23 AGBL4 (ENSMPUG00000012352) #24 BEND5 (ENSMPUG00000012351) #25 ENSMPUG00000012350 #24 Canidae ANCESTRAL SPECIES 12 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m.f #10 ENSGT00940000155173.n #10 ENSGT00940000155173.m.e.a.a #10 ENSGT00940000155173.m.e.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831.db.a ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00390000002443 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m.f #10 ENSGT00940000155173.m.e.a.a #10 ENSGT00940000155173.m.e.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831.db.a ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00530000063273.a Dingo MODERN SPECIES 344 ENSCAFG00020014750 ENSCAFG00020014748 CYP4B1 (ENSCAFG00020014733) #7 ENSCAFG00020014728 #10 ENSCAFG00020014722 #10 ENSCAFG00020014560 #10 ENSCAFG00020014556 #10 CYP4X1 (ENSCAFG00020014528) #11 PDZK1IP1 (ENSCAFG00020014525) #12 TAL1 (ENSCAFG00020014522) #13 STIL (ENSCAFG00020014512) #14 CMPK1 (ENSCAFG00020014509) #15 FOXE3 (ENSCAFG00020014507) #16 FOXD2 (ENSCAFG00020014506) #17 TRABD2B (ENSCAFG00020014503) #18 SLC5A9 (ENSCAFG00020014477) #22 SPATA6 (ENSCAFG00020014474) #23 ENSCAFG00020014472 #24 ENSCAFG00020014471 #24 BEND5 (ENSCAFG00020014470) #25 ELAVL4 (ENSCAFG00020013581) DMRTA2 (ENSCAFG00020013554) ENSCAFG00020013547 ENSCAFG00020013544 ENSCAFG00020013515 CDKN2C (ENSCAFG00020013503) C1orf185 (ENSCAFG00020013497) RNF11 (ENSCAFG00020013494) TTC39A (ENSCAFG00020013487) EPS15 (ENSCAFG00020013470) OSBPL9 (ENSCAFG00020013459) Dog MODERN SPECIES 6 ATPAF1 (ENSCAFG00845018669) ENSCAFG00845018605 EFCAB14 (ENSCAFG00845018333) CYP4B1 (ENSCAFG00845018109) #7 CYP4A11 (ENSCAFG00845018002) #10 CYP4A38 (ENSCAFG00845017288) #10 ENSCAFG00845017005 #10 CYP4X1 (ENSCAFG00845016805) #11 PDZK1IP1 (ENSCAFG00845016726) #12 TAL1 (ENSCAFG00845016668) #13 STIL (ENSCAFG00845016474) #14 CMPK1 (ENSCAFG00845016195) #15 FOXE3 (ENSCAFG00845027178) #16 FOXD2 (ENSCAFG00845027149) #17 TRABD2B (ENSCAFG00845027015) #18 SLC5A9 (ENSCAFG00845026902) #22 SPATA6 (ENSCAFG00845026650) #23 AGBL4 (ENSCAFG00845025876) #25 ELAVL4 (ENSCAFG00845025265) DMRTA2 (ENSCAFG00845025044) ENSCAFG00845024999 FAF1 (ENSCAFG00845024609) CDKN2C (ENSCAFG00845024510) C1orf185 (ENSCAFG00845024301) RNF11 (ENSCAFG00845024230) TTC39A (ENSCAFG00845023616) EPS15 (ENSCAFG00845022599) OSBPL9 (ENSCAFG00845021857) NRDC (ENSCAFG00845021372) TXNDC12 (ENSCAFG00845021135) BTF3L4 (ENSCAFG00845020858) Red fox MODERN SPECIES 9 MOB3C (ENSVVUG00000007033) ATPAF1 (ENSVVUG00000007030) TEX38 (ENSVVUG00000007029) EFCAB14 (ENSVVUG00000007017) CYP4B1 (ENSVVUG00000007000) #7 ENSVVUG00000006767 #10 ENSVVUG00000006748 #10 ENSVVUG00000006722 #10 ENSVVUG00000006690 #10 CYP4X1 (ENSVVUG00000006664) #11 PDZK1IP1 (ENSVVUG00000006655) #12 ENSVVUG00000006648 #13 STIL (ENSVVUG00000006441) #14 CMPK1 (ENSVVUG00000006426) #15 TRABD2B (ENSVVUG00000006378) #18 SLC5A9 (ENSVVUG00000006359) #22 SPATA6 (ENSVVUG00000006346) #23 ENSVVUG00000006309 #24 BEND5 (ENSVVUG00000006293) #25 ELAVL4 (ENSVVUG00000006175) ENSVVUG00000006092 ENSVVUG00000006087 ENSVVUG00000006081 FAF1 (ENSVVUG00000006069) CDKN2C (ENSVVUG00000006026) C1orf185 (ENSVVUG00000005980) ENSVVUG00000005976 RNF11 (ENSVVUG00000005971) TTC39A (ENSVVUG00000005650) EPS15 (ENSVVUG00000004902) OSBPL9 (ENSVVUG00000004835) Felidae ANCESTRAL SPECIES 10 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m.b #10 ENSGT00940000155173.m.a.a #10 ENSGT00940000155173.m.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 Panthera ANCESTRAL SPECIES 4 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m.b #10 ENSGT00940000155173.m.a.a #10 ENSGT00940000155173.m.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 Panthera_a ANCESTRAL SPECIES 11 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173.m.b #10 ENSGT00940000155173.m.a.a #10 ENSGT00940000155173.m.a.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000155026 ENSGT00940000159943 ENSGT00900000142372 leopard MODERN SPECIES 16 ATPAF1 (ENSPPRG00000024212) TEX38 (ENSPPRG00000023945) EFCAB14 (ENSPPRG00000023530) CYP4B1 (ENSPPRG00000022661) #7 ENSPPRG00000004202 #10 CYP4A106 (ENSPPRG00000005233) #10 CYP4A37 (ENSPPRG00000007723) #10 CYP4X1 (ENSPPRG00000008167) #11 PDZK1IP1 (ENSPPRG00000008341) #12 TAL1 (ENSPPRG00000008561) #13 STIL (ENSPPRG00000010998) #14 ENSPPRG00000012334 #15 FOXE3 (ENSPPRG00000012774) #16 FOXD2 (ENSPPRG00000017402) #17 TRABD2B (ENSPPRG00000013314) #18 SLC5A9 (ENSPPRG00000020008) #22 SPATA6 (ENSPPRG00000023213) #23 AGBL4 (ENSPPRG00000022863) #24 BEND5 (ENSPPRG00000022625) #25 ENSPPRG00000017680 ENSPPRG00000001721 #24 ELAVL4 (ENSPPRG00000002764) DMRTA2 (ENSPPRG00000003651) FAF1 (ENSPPRG00000005301) CDKN2C (ENSPPRG00000005623) C1orf185 (ENSPPRG00000006868) RNF11 (ENSPPRG00000007187) TTC39A (ENSPPRG00000010046) ENSPPRG00000011797 EPS15 (ENSPPRG00000014230) OSBPL9 (ENSPPRG00000002600) lion MODERN SPECIES 8 ATPAF1 (ENSPLOG00000007299) TEX38 (ENSPLOG00000007261) EFCAB14 (ENSPLOG00000007158) ENSPLOG00000007122 #7 ENSPLOG00000007060 #10 ENSPLOG00000006991 #10 ENSPLOG00000006700 #10 CYP4X1 (ENSPLOG00000006599) #11 PDZK1IP1 (ENSPLOG00000006576) #12 TAL1 (ENSPLOG00000006549) #13 STIL (ENSPLOG00000006499) #14 CMPK1 (ENSPLOG00000006430) #15 FOXE3 (ENSPLOG00000006409) #16 FOXD2 (ENSPLOG00000006398) #17 TRABD2B (ENSPLOG00000006352) #18 SLC5A9 (ENSPLOG00000006218) #22 SPATA6 (ENSPLOG00000006148) #23 BEND5 (ENSPLOG00000006114) #25 AGBL4 (ENSPLOG00000006006) #24 ELAVL4 (ENSPLOG00000005634) ENSPLOG00000005447 DMRTA2 (ENSPLOG00000005423) ENSPLOG00000005409 FAF1 (ENSPLOG00000005328) CDKN2C (ENSPLOG00000005297) C1orf185 (ENSPLOG00000005287) RNF11 (ENSPLOG00000005279) TTC39A (ENSPLOG00000005228) ENSPLOG00000005215 EPS15 (ENSPLOG00000005145) ENSPLOG00000004872 Tiger MODERN SPECIES 100 MKNK1 (ENSPTIG00000004539) MOB3C (ENSPTIG00000002465) ATPAF1 (ENSPTIG00000022016) TEX38 (ENSPTIG00000021969) EFCAB14 (ENSPTIG00000021900) CYP4B1 (ENSPTIG00000021254) #7 ENSPTIG00000020880 #10 CYP4A106 (ENSPTIG00000020491) #10 CYP4A37 (ENSPTIG00000018827) #10 CYP4X1 (ENSPTIG00000018303) #11 PDZK1IP1 (ENSPTIG00000018010) #12 TAL1 (ENSPTIG00000017616) #13 STIL (ENSPTIG00000011691) #14 CMPK1 (ENSPTIG00000011122) #15 TRABD2B (ENSPTIG00000009870) #18 SLC5A9 (ENSPTIG00000007011) #22 SPATA6 (ENSPTIG00000021470) #23 AGBL4 (ENSPTIG00000021182) #24 BEND5 (ENSPTIG00000020902) #25 ENSPTIG00000005063 ENSPTIG00000019852 #24 ELAVL4 (ENSPTIG00000016727) FAF1 (ENSPTIG00000014264) CDKN2C (ENSPTIG00000013155) C1orf185 (ENSPTIG00000012429) RNF11 (ENSPTIG00000012147) TTC39A (ENSPTIG00000006822) EPS15 (ENSPTIG00000021361) OSBPL9 (ENSPTIG00000014514) ENSPTIG00000014000 NRDC (ENSPTIG00000011593) Cat MODERN SPECIES 239 ATPAF1 (ENSFCAG00000024832) TEX38 (ENSFCAG00000004534) EFCAB14 (ENSFCAG00000004536) CYP4B1 (ENSFCAG00000002762) #7 ENSFCAG00000038068 #10 ENSFCAG00000037991 #10 CYP4A37 (ENSFCAG00000040744) #10 CYP4X1 (ENSFCAG00000007168) #11 PDZK1IP1 (ENSFCAG00000019308) #12 TAL1 (ENSFCAG00000045414) #13 STIL (ENSFCAG00000012141) #14 CMPK1 (ENSFCAG00000025426) #15 FOXE3 (ENSFCAG00000046511) #16 FOXD2 (ENSFCAG00000044804) #17 TRABD2B (ENSFCAG00000000546) #18 SLC5A9 (ENSFCAG00000000548) #22 SPATA6 (ENSFCAG00000029729) #23 AGBL4 (ENSFCAG00000000550) #24 ENSFCAG00000022016 ELAVL4 (ENSFCAG00000010438) DMRTA2 (ENSFCAG00000045950) FAF1 (ENSFCAG00000011327) ENSFCAG00000028644 CDKN2C (ENSFCAG00000033306) CC1H1orf185 (ENSFCAG00000043741) RNF11 (ENSFCAG00000035271) TTC39A (ENSFCAG00000014565) EPS15 (ENSFCAG00000027650) OSBPL9 (ENSFCAG00000010298) NRDC (ENSFCAG00000022018) ENSFCAG00000031410 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Chiroptera ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000162562.B ##21 ENSGT00940000162562.A #21 ENSGT00940000164707 #19 ENSGT00940000157546 #22 ENSGT00990000204587 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Greater horseshoe bat MODERN SPECIES 27 CYP4B1 (ENSRFEG00010001687) #7 ENSRFEG00010001800 #10 CYP4X1 (ENSRFEG00010001881) #11 PDZK1IP1 (ENSRFEG00010001905) #12 TAL1 (ENSRFEG00010001940) #13 STIL (ENSRFEG00010001982) #14 ENSRFEG00010002024 CMPK1 (ENSRFEG00010002044) #15 FOXE3 (ENSRFEG00010002079) #16 FOXD2 (ENSRFEG00010002087) #17 TRABD2B (ENSRFEG00010002104) #18 ENSRFEG00010002138 ENSRFEG00010002154 ##21 ENSRFEG00010002180 #21 ENSRFEG00010002204 #19 SLC5A9 (ENSRFEG00010002222) #22 ENSRFEG00010002251 SPATA6 (ENSRFEG00010002287) #23 AGBL4 (ENSRFEG00010002410) #24 BEND5 (ENSRFEG00010002514) #25 ELAVL4 (ENSRFEG00010002640) DMRTA2 (ENSRFEG00010002791) FAF1 (ENSRFEG00010002825) CDKN2C (ENSRFEG00010002917) ENSRFEG00010002937 RNF11 (ENSRFEG00010002953) TTC39A (ENSRFEG00010003039) EPS15 (ENSRFEG00010003189) ENSRFEG00010003316 OSBPL9 (ENSRFEG00010003405) NRDC (ENSRFEG00010003552) Microbat MODERN SPECIES 974 MOB3C (ENSMLUG00000007841) ATPAF1 (ENSMLUG00000007861) TEX38 (ENSMLUG00000029002) ENSMLUG00000014593 CYP4B1 (ENSMLUG00000002776) #7 ENSMLUG00000024150 #10 ENSMLUG00000025621 #7 ENSMLUG00000002780 #10 CYP4X1 (ENSMLUG00000011781) #11 PDZK1IP1 (ENSMLUG00000006083) #12 TAL1 (ENSMLUG00000006388) #13 STIL (ENSMLUG00000006395) #14 TRABD2B (ENSMLUG00000010918) #18 ENSMLUG00000022445 ##21 ENSMLUG00000024145 #21 SLC5A9 (ENSMLUG00000010198) #22 SPATA6 (ENSMLUG00000011417) #23 ENSMLUG00000016567 #24 BEND5 (ENSMLUG00000016578) #25 ELAVL4 (ENSMLUG00000006226) DMRTA2 (ENSMLUG00000006249) FAF1 (ENSMLUG00000006252) CDKN2C (ENSMLUG00000006627) C1orf185 (ENSMLUG00000023716) ENSMLUG00000004439 TTC39A (ENSMLUG00000004443) EPS15 (ENSMLUG00000004454) OSBPL9 (ENSMLUG00000009199) NRDC (ENSMLUG00000009233) RAB3B (ENSMLUG00000016868) TXNDC12 (ENSMLUG00000016872) Megabat MODERN SPECIES 141 SLC5A9 (ENSPVAG00000003625) #22 SPATA6 (ENSPVAG00000003628) #23 AGBL4 (ENSPVAG00000003630) #24 ELAVL4 (ENSPVAG00000003632) Equus ANCESTRAL SPECIES 2 ENSGT00940000161441.c.a.b #7 ENSGT00940000163504 ENSGT00940000155173.r #10 ENSGT00940000161441.c.a.a #7 ENSGT00940000155173.q.a.a #10 ENSGT00940000161441.c.b.a #7 ENSGT00940000155173.q.a.b #10 ENSGT00940000155173.q.b #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163987 #16 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Horse MODERN SPECIES 11 ENSECAG00000054636 #7 ENSECAG00000024521 #7 ENSECAG00000028078 #10 ENSECAG00000048848 #7 ENSECAG00000036794 #10 ENSECAG00000046409 #10 ENSECAG00000045102 ENSECAG00000027949 #10 ENSECAG00000033081 #7 CYP4X1 (ENSECAG00000020100) #11 TAL1 (ENSECAG00000018746) #13 STIL (ENSECAG00000011152) #14 CMPK1 (ENSECAG00000000428) #15 FOXE3 (ENSECAG00000049916) #16 TRABD2B (ENSECAG00000022697) #18 SLC5A9 (ENSECAG00000011684) #22 SPATA6 (ENSECAG00000000158) #23 ENSECAG00000055301 #24 BEND5 (ENSECAG00000051417) #25 ENSECAG00000059132 #24 ELAVL4 (ENSECAG00000022284) DMRTA2 (ENSECAG00000029061) ENSECAG00000044105 FAF1 (ENSECAG00000008495) CDKN2C (ENSECAG00000004817) C2H1orf185 (ENSECAG00000025041) ENSECAG00000055972 RNF11 (ENSECAG00000036831) TTC39A (ENSECAG00000015196) EPS15 (ENSECAG00000020824) CALR4 (ENSECAG00000015205) Donkey MODERN SPECIES 25 ENSEASG00005010120 #7 ENSEASG00005024025 ENSEASG00005010627 #10 ENSEASG00005037264 #7 ENSEASG00005010169 #10 ENSEASG00005014485 #10 ENSEASG00005010633 #10 ENSEASG00005010640 #10 ENSEASG00005010647 #11 ENSEASG00005034479 ENSEASG00005023820 #12 ENSEASG00005038126 #13 STIL (ENSEASG00005010657) #14 CMPK1 (ENSEASG00005010695) #15 TRABD2B (ENSEASG00005010700) #18 SLC5A9 (ENSEASG00005010710) #22 SPATA6 (ENSEASG00005010718) #23 AGBL4 (ENSEASG00005010721) #24 BEND5 (ENSEASG00005010723) #25 ELAVL4 (ENSEASG00005010728) DMRTA2 (ENSEASG00005037248) FAF1 (ENSEASG00005010732) CDKN2C (ENSEASG00005010733) C1orf185 (ENSEASG00005037128) RNF11 (ENSEASG00005037659) TTC39A (ENSEASG00005010736) EPS15 (ENSEASG00005010751) ENSEASG00005010925 ENSEASG00005030901 OSBPL9 (ENSEASG00005010962) NRDC (ENSEASG00005011045) Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157546 #22 Hedgehog MODERN SPECIES 2886 SLC5A9 (ENSEEUG00000015307) #22 Common shrew MODERN SPECIES 1371 ENSSARG00000004212 #22 Atlantogenata ANCESTRAL SPECIES 11 ENSGT00400000024146 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Afrotheria ANCESTRAL SPECIES 21 ENSGT00940000162886 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Afrotheria_a ANCESTRAL SPECIES 20 ENSGT00940000162886 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 #7 ENSGT00940000155173 #10 ENSGT00940000160927 #11 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00390000000797 ENSGT00940000163721 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 Elephant MODERN SPECIES 145 MKNK1 (ENSLAFG00000015556) MOB3C (ENSLAFG00000002653) ATPAF1 (ENSLAFG00000022494) TEX38 (ENSLAFG00000032346) EFCAB14 (ENSLAFG00000011146) CYP4B1 (ENSLAFG00000011142) #7 ENSLAFG00000011889 #10 ENSLAFG00000027061 ENSLAFG00000002985 #11 PDZK1IP1 (ENSLAFG00000029973) #12 TAL1 (ENSLAFG00000013880) #13 STIL (ENSLAFG00000006255) #14 ENSLAFG00000006582 FOXD2 (ENSLAFG00000026547) #17 ENSLAFG00000032111 #18 SLC5A9 (ENSLAFG00000016268) #22 SPATA6 (ENSLAFG00000016279) #23 ENSLAFG00000012535 #24 BEND5 (ENSLAFG00000003490) #25 ELAVL4 (ENSLAFG00000001087) DMRTA2 (ENSLAFG00000021953) FAF1 (ENSLAFG00000012030) ENSLAFG00000032567 CDKN2C (ENSLAFG00000009338) C1orf185 (ENSLAFG00000030448) ENSLAFG00000026503 TTC39A (ENSLAFG00000021966) EPS15 (ENSLAFG00000012528) ENSLAFG00000016931 OSBPL9 (ENSLAFG00000001251) NRDC (ENSLAFG00000001255) Hyrax MODERN SPECIES 1485 SLC5A9 (ENSPCAG00000016839) #22 Tenrec MODERN SPECIES 1839 SLC5A9 (ENSETEG00000002143) #22 Xenarthra ANCESTRAL SPECIES 1218 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 Armadillo MODERN SPECIES 1563 SLC5A9 (ENSDNOG00000004042) #22 SPATA6 (ENSDNOG00000037466) #23 ENSDNOG00000032524 #24 BEND5 (ENSDNOG00000044786) #25 ENSDNOG00000048168 #24 ENSDNOG00000005297 Sloth MODERN SPECIES 1659 SLC5A9 (ENSCHOG00000013251) #22 Marsupialia DUPLICATION Marsupialia DUPLICATION Marsupialia ANCESTRAL SPECIES ENSGT00940000157546.i.a #22 Opossum MODERN SPECIES 435 ENSMODG00000043348 #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000157546.i.a #22 Tasmanian devil MODERN SPECIES 1 MMP21 (ENSSHAG00000010384) UROS (ENSSHAG00000010468) BCCIP (ENSSHAG00000010600) DHX32 (ENSSHAG00000010635) FANK1 (ENSSHAG00000011252) ADAM12 (ENSSHAG00000011484) ENSSHAG00000013645 ENSSHAG00000029926 DOCK1 (ENSSHAG00000015107) INSYN2A (ENSSHAG00000026318) ENSSHAG00000025114 ENSSHAG00000006952 CLRN3 (ENSSHAG00000028413) ENSSHAG00000023519 ENSSHAG00000000360 ENSSHAG00000031175 #22 ENSSHAG00000027038 ENSSHAG00000028096 EBF3 (ENSSHAG00000000353) GLRX3 (ENSSHAG00000005817) TCERG1L (ENSSHAG00000031422) ENSSHAG00000030744 PPP2R2D (ENSSHAG00000002913) JAKMIP3 (ENSSHAG00000006010) DPYSL4 (ENSSHAG00000007352) STK32C (ENSSHAG00000008001) ENSSHAG00000009640 INPP5A (ENSSHAG00000001898) NKX6-2 (ENSSHAG00000025952) ENSSHAG00000000893 ENSSHAG00000003119 Marsupialia ANCESTRAL SPECIES ENSGT00940000157546.i.b #22 Opossum MODERN SPECIES 1 MKNK1 (ENSMODG00000001951) MOB3C (ENSMODG00000048219) ATPAF1 (ENSMODG00000001918) EFCAB14 (ENSMODG00000001906) ENSMODG00000001890 #10 ENSMODG00000045742 #7 ENSMODG00000001709 #7 ENSMODG00000025699 #10 ENSMODG00000001521 #10 ENSMODG00000001509 #12 TAL1 (ENSMODG00000001502) #13 STIL (ENSMODG00000001494) #14 CMPK1 (ENSMODG00000001470) #15 ENSMODG00000001419 TRABD2B (ENSMODG00000025378) #18 ENSMODG00000001399 #22 SPATA6 (ENSMODG00000001370) #23 ENSMODG00000043124 ELAVL4 (ENSMODG00000001300) ENSMODG00000037117 ENSMODG00000028629 DMRTA2 (ENSMODG00000001251) FAF1 (ENSMODG00000001243) CDKN2C (ENSMODG00000050495) RNF11 (ENSMODG00000001185) TTC39A (ENSMODG00000001179) ENSMODG00000001043 ENSMODG00000043919 ENSMODG00000000946 OSBPL9 (ENSMODG00000000934) NRDC (ENSMODG00000000839) Marsupialia ANCESTRAL SPECIES 3 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000155173.w.b #10 ENSGT00940000161441.a #7 ENSGT00940000155173.x.b #10 ENSGT00940000155173.x.a #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546.j #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399.n ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00390000002443 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000155173.w.b #10 ENSGT00940000155173.w.a #10 ENSGT00940000161441.a #7 ENSGT00940000155173.x.b #10 ENSGT00940000155173.x.a #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546.j #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399.n ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00390000002443 Diprotodontia ANCESTRAL SPECIES 80 ENSGT00940000161273 #18 ENSGT00940000157546.j #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399.n ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00530000063273.a Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000155173.w.b #10 ENSGT00940000155173.w.a #10 ENSGT00940000161441.b.a.a #7 ENSGT00940000161441.a #7 ENSGT00940000155173.x.b #10 ENSGT00940000155173.x.a #10 ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546.j #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000157399.n ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 ENSGT00530000063273.a Common wonbat MODERN SPECIES 1060 EFCAB14 (ENSVURG00010017484) ENSVURG00010017500 #10 ENSVURG00010017522 #10 ENSVURG00010017535 ENSVURG00010017542 #7 ENSVURG00010017567 #7 ENSVURG00010017579 #10 ENSVURG00010017586 #10 PDZK1IP1 (ENSVURG00010017600) #12 TAL1 (ENSVURG00010017608) #13 STIL (ENSVURG00010017620) #14 CMPK1 (ENSVURG00010017630) #15 ENSVURG00010017639 FOXD2 (ENSVURG00010017640) #17 TRABD2B (ENSVURG00010017643) #18 SLC5A9 (ENSVURG00010017646) #22 SPATA6 (ENSVURG00010017656) #23 ENSVURG00010017676 #24 BEND5 (ENSVURG00010017683) #25 ENSVURG00010017690 ELAVL4 (ENSVURG00010017721) DMRTA2 (ENSVURG00010018172) FAF1 (ENSVURG00010018181) CDKN2C (ENSVURG00010018190) RNF11 (ENSVURG00010018204) TTC39A (ENSVURG00010018213) EPS15 (ENSVURG00010018256) ENSVURG00010018275 OSBPL9 (ENSVURG00010018296) NRDC (ENSVURG00010018372) TXNDC12 (ENSVURG00010018423) koala MODERN SPECIES 29 ENSPCIG00000011519 ENSPCIG00000011510 ENSPCIG00000026495 #10 ENSPCIG00000026493 #10 ENSPCIG00000036724 #7 ENSPCIG00000026492 #7 ENSPCIG00000026491 #7 ENSPCIG00000006228 #10 PDZK1IP1 (ENSPCIG00000006233) #12 TAL1 (ENSPCIG00000033850) #13 STIL (ENSPCIG00000006238) #14 ENSPCIG00000016606 ENSPCIG00000016604 FOXD2 (ENSPCIG00000024785) #17 TRABD2B (ENSPCIG00000036779) #18 SLC5A9 (ENSPCIG00000019164) #22 SPATA6 (ENSPCIG00000004132) #23 ENSPCIG00000012506 #24 BEND5 (ENSPCIG00000004124) #25 ENSPCIG00000033716 #24 ELAVL4 (ENSPCIG00000032142) DMRTA2 (ENSPCIG00000030921) FAF1 (ENSPCIG00000001340) CDKN2C (ENSPCIG00000001502) RNF11 (ENSPCIG00000017406) TTC39A (ENSPCIG00000006797) EPS15 (ENSPCIG00000030216) ENSPCIG00000030211 OSBPL9 (ENSPCIG00000024185) NRDC (ENSPCIG00000024193) RAB3B (ENSPCIG00000024200) Wallaby MODERN SPECIES 3760 SLC5A9 (ENSMEUG00000008217) #22 Platypus MODERN SPECIES 9 ENSOANG00000043609 LRRC41 (ENSOANG00000044307) RAD54L (ENSOANG00000039799) LURAP1 (ENSOANG00000044785) POMGNT1 (ENSOANG00000039832) ENSOANG00000014732 ENSOANG00000002637 ENSOANG00000002639 PDZK1IP1 (ENSOANG00000042171) #12 TAL1 (ENSOANG00000032005) #13 ENSOANG00000002942 #14 ENSOANG00000015215 ENSOANG00000043767 ENSOANG00000030729 TRABD2B (ENSOANG00000037757) #18 SLC5A9 (ENSOANG00000004257) #22 ENSOANG00000041444 #23 BEND5 (ENSOANG00000009132) #25 ELAVL4 (ENSOANG00000036778) DMRTA2 (ENSOANG00000040884) FAF1 (ENSOANG00000006035) CDKN2C (ENSOANG00000040623) ENSOANG00000045226 ENSOANG00000050041 RNF11 (ENSOANG00000013493) TTC39A (ENSOANG00000013494) ENSOANG00000014893 ENSOANG00000048539 ENSOANG00000012572 OSBPL9 (ENSOANG00000040748) NRDC (ENSOANG00000050474) Sauria ANCESTRAL SPECIES 7 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161441 #7 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a Lepidosauria ANCESTRAL SPECIES 11 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161441 #7 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a Episquamata ANCESTRAL SPECIES 1 ENSGT00390000012765 ENSGT00960000192856 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161527.d.b.b ENSGT00940000161527.d.b.a.c ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a Laterata ANCESTRAL SPECIES 3 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00960000192856 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161527.d.b.b ENSGT00940000161527.d.b.a.c ENSGT00940000161527.d.a.c ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a Common wall lizard MODERN SPECIES 14 ENSPMRG00000007882 ENSPMRG00000007878 ENSPMRG00000007876 ENSPMRG00000007869 ENSPMRG00000007867 ENSPMRG00000007855 ENSPMRG00000007850 ENSPMRG00000007789 PDZK1IP1 (ENSPMRG00000007777) #12 TAL1 (ENSPMRG00000007774) #13 STIL (ENSPMRG00000007767) #14 ENSPMRG00000007758 ENSPMRG00000007733 FOXD2 (ENSPMRG00000007722) #17 TRABD2B (ENSPMRG00000007718) #18 SLC5A9 (ENSPMRG00000007711) #22 ENSPMRG00000007706 SPATA6 (ENSPMRG00000006072) #23 ENSPMRG00000006060 #24 BEND5 (ENSPMRG00000006049) #25 ENSPMRG00000006044 ENSPMRG00000006039 ENSPMRG00000006025 #24 ELAVL4 (ENSPMRG00000005996) ENSPMRG00000005978 DMRTA2 (ENSPMRG00000005970) FAF1 (ENSPMRG00000005947) CDKN2C (ENSPMRG00000005936) RNF11 (ENSPMRG00000005930) TTC39A (ENSPMRG00000005792) EPS15 (ENSPMRG00000005708) Argentine black and white tegu MODERN SPECIES 16 DMBX1 (ENSSMRG00000018338) TMEM275 (ENSSMRG00000018337) ENSSMRG00000018336 MOB3C (ENSSMRG00000018334) ATPAF1 (ENSSMRG00000018333) EFCAB14 (ENSSMRG00000018332) ENSSMRG00000018331 ENSSMRG00000018315 ENSSMRG00000018313 PDZK1IP1 (ENSSMRG00000018312) #12 TAL1 (ENSSMRG00000018311) #13 STIL (ENSSMRG00000018309) #14 ENSSMRG00000018308 ENSSMRG00000018307 ENSSMRG00000018306 SLC5A9 (ENSSMRG00000018304) #22 ENSSMRG00000018303 SPATA6 (ENSSMRG00000018302) #23 ENSSMRG00000018301 #24 BEND5 (ENSSMRG00000018300) #25 ENSSMRG00000018299 #24 ELAVL4 (ENSSMRG00000018298) ENSSMRG00000018296 DMRTA2 (ENSSMRG00000018294) FAF1 (ENSSMRG00000018293) CDKN2C (ENSSMRG00000018292) TTC39A (ENSSMRG00000018291) RNF11 (ENSSMRG00000018290) EPS15 (ENSSMRG00000018289) ENSSMRG00000018288 OSBPL9 (ENSSMRG00000018287) Toxicofera ANCESTRAL SPECIES 1 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00960000192856 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161527.d.b.a.d ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000163630.Q.e.a ENSGT01030000234712.a ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 Lizard MODERN SPECIES 863 ENSACAG00000006623 ENSACAG00000006620 ENSACAG00000006613 ENSACAG00000005985 PDZK1IP1 (ENSACAG00000028602) #12 TAL1 (ENSACAG00000005980) #13 STIL (ENSACAG00000005943) #14 CMPK1 (ENSACAG00000040184) ENSACAG00000009553 FOXD2 (ENSACAG00000005885) #17 TRABD2B (ENSACAG00000029091) #18 ENSACAG00000042624 ENSACAG00000043050 ENSACAG00000044679 ENSACAG00000005879 ENSACAG00000005693 #22 ENSACAG00000041750 ENSACAG00000044494 ENSACAG00000043550 ENSACAG00000005675 #23 ENSACAG00000028425 #24 Elapidae ANCESTRAL SPECIES 1 ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00960000192856 ENSGT00390000011196 ENSGT00940000161527.c.b ENSGT00940000161527.d.a ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724.d #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a ENSGT00940000159943 Elapidae_a ANCESTRAL SPECIES 7 ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00960000192856 ENSGT00390000011196 ENSGT00940000161527.c.b ENSGT00940000161527.d.a ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724.d #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a ENSGT00940000159943 Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00960000192856 ENSGT00390000011196 ENSGT00940000161527.c.b ENSGT00940000161527.d.a ENSGT00980000201417 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724.d #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026.k.a ENSGT00940000159943 Eastern brown snake MODERN SPECIES 34 DMBX1 (ENSPTXG00000001497) ENSPTXG00000001502 MOB3C (ENSPTXG00000001507) ATPAF1 (ENSPTXG00000001511) ENSPTXG00000001516 EFCAB14 (ENSPTXG00000001523) ENSPTXG00000001527 ENSPTXG00000001532 ENSPTXG00000001545 ENSPTXG00000001547 #13 STIL (ENSPTXG00000001553) #14 ENSPTXG00000001577 ENSPTXG00000001580 FOXD2 (ENSPTXG00000001582) #17 TRABD2B (ENSPTXG00000001584) #18 SLC5A9 (ENSPTXG00000001588) #22 SPATA6 (ENSPTXG00000001592) #23 AGBL4 (ENSPTXG00000001598) #24 BEND5 (ENSPTXG00000001603) #25 ENSPTXG00000001605 ELAVL4 (ENSPTXG00000001627) ENSPTXG00000001878 DMRTA2 (ENSPTXG00000001879) FAF1 (ENSPTXG00000001880) CDKN2C (ENSPTXG00000001881) RNF11 (ENSPTXG00000001882) TTC39A (ENSPTXG00000001883) EPS15 (ENSPTXG00000001884) ENSPTXG00000001890 OSBPL9 (ENSPTXG00000001894) ENSPTXG00000001900 Mainland tiger snake MODERN SPECIES 13 ENSNSUG00000016166 ENSNSUG00000016167 MOB3C (ENSNSUG00000016168) ATPAF1 (ENSNSUG00000016169) ENSNSUG00000016170 EFCAB14 (ENSNSUG00000016171) ENSNSUG00000016172 ENSNSUG00000016173 ENSNSUG00000016174 TAL1 (ENSNSUG00000016175) #13 STIL (ENSNSUG00000016176) #14 CMPK1 (ENSNSUG00000016179) #15 ENSNSUG00000016180 FOXD2 (ENSNSUG00000016181) #17 TRABD2B (ENSNSUG00000016185) #18 SLC5A9 (ENSNSUG00000016192) #22 SPATA6 (ENSNSUG00000016298) #23 ENSNSUG00000016299 #24 BEND5 (ENSNSUG00000016300) #25 ENSNSUG00000016301 #24 ELAVL4 (ENSNSUG00000016302) DMRTA2 (ENSNSUG00000016323) FAF1 (ENSNSUG00000016324) CDKN2C (ENSNSUG00000016325) TTC39A (ENSNSUG00000016326) EPS15 (ENSNSUG00000016327) ENSNSUG00000016329 OSBPL9 (ENSNSUG00000016390) ENSNSUG00000017629 RAB3B (ENSNSUG00000018184) TXNDC12 (ENSNSUG00000018185) Blue-lipped sea krait MODERN SPECIES 2670 SLC5A9 (ENSLLTG00000017962) #22 Indian cobra MODERN SPECIES 2 ENSNNAG00000009543 DMBX1 (ENSNNAG00000009640) ENSNNAG00000009684 MOB3C (ENSNNAG00000009741) ATPAF1 (ENSNNAG00000009764) ENSNNAG00000009790 EFCAB14 (ENSNNAG00000009832) ENSNNAG00000009903 ENSNNAG00000009996 TAL1 (ENSNNAG00000010424) #13 STIL (ENSNNAG00000010456) #14 CMPK1 (ENSNNAG00000010501) #15 ENSNNAG00000010525 FOXD2 (ENSNNAG00000010546) #17 TRABD2B (ENSNNAG00000010576) #18 SLC5A9 (ENSNNAG00000010629) #22 SPATA6 (ENSNNAG00000010665) #23 ENSNNAG00000010704 #24 BEND5 (ENSNNAG00000010746) #25 ENSNNAG00000010783 #24 ELAVL4 (ENSNNAG00000010818) DMRTA2 (ENSNNAG00000010977) FAF1 (ENSNNAG00000010998) ENSNNAG00000011066 ENSNNAG00000011091 CDKN2C (ENSNNAG00000011113) RNF11 (ENSNNAG00000011128) TTC39A (ENSNNAG00000011153) EPS15 (ENSNNAG00000011248) ENSNNAG00000011439 OSBPL9 (ENSNNAG00000011517) tuatara MODERN SPECIES 1725 DMBX1 (ENSSPUG00000008894) ENSSPUG00000008905 MOB3C (ENSSPUG00000008916) ATPAF1 (ENSSPUG00000009006) EFCAB14 (ENSSPUG00000009350) CYP4B1 (ENSSPUG00000009405) CYP4B35 (ENSSPUG00000009557) #7 CYP4B36 (ENSSPUG00000009899) CYP4B37 (ENSSPUG00000010107) CYP4B38 (ENSSPUG00000010929) TAL1 (ENSSPUG00000011173) #13 STIL (ENSSPUG00000011248) #14 ENSSPUG00000011504 ENSSPUG00000011518 FOXD2 (ENSSPUG00000011531) #17 SLC5A9 (ENSSPUG00000011544) #22 SPATA6 (ENSSPUG00000011583) #23 ENSSPUG00000011592 #24 ENSSPUG00000011602 #25 ENSSPUG00000011621 #24 ELAVL4 (ENSSPUG00000011636) FAF1 (ENSSPUG00000011732) CDKN2C (ENSSPUG00000011758) RNF11 (ENSSPUG00000011773) TTC39A (ENSSPUG00000011783) EPS15 (ENSSPUG00000011819) ENSSPUG00000011863 ENSSPUG00000011884 OSBPL9 (ENSSPUG00000012142) ENSSPUG00000013001 RAB3B (ENSSPUG00000013039) Archelosauria ANCESTRAL SPECIES 9 ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Cryptodira ANCESTRAL SPECIES 8 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.c.f ENSGT00940000161527.d.b.b ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000161273 #18 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 ENSGT00530000063273.a Testudinoidea ANCESTRAL SPECIES 5 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.c.f ENSGT00940000161441 #7 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.a.a.a ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Testudinidae ANCESTRAL SPECIES 33 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.c.f ENSGT00940000161441 #7 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.a.a.a ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Goode s thornscrub tortoise MODERN SPECIES 22 ENSGEVG00005019576 MOB3C (ENSGEVG00005019561) ATPAF1 (ENSGEVG00005019541) TEX38 (ENSGEVG00005019533) EFCAB14 (ENSGEVG00005019524) ENSGEVG00005019451 ENSGEVG00005019318 ENSGEVG00005019175 ENSGEVG00005018800 PDZK1IP1 (ENSGEVG00005018742) #12 TAL1 (ENSGEVG00005018730) #13 STIL (ENSGEVG00005018571) #14 ENSGEVG00005018548 ENSGEVG00005018529 FOXD2 (ENSGEVG00005018509) #17 SLC5A9 (ENSGEVG00005018452) #22 SPATA6 (ENSGEVG00005018413) #23 ENSGEVG00005018360 #24 BEND5 (ENSGEVG00005018332) #25 ENSGEVG00005018302 #24 ELAVL4 (ENSGEVG00005017971) DMRTA2 (ENSGEVG00005017905) FAF1 (ENSGEVG00005017857) CDKN2C (ENSGEVG00005017834) RNF11 (ENSGEVG00005017825) TTC39A (ENSGEVG00005016642) EPS15 (ENSGEVG00005016380) OSBPL9 (ENSGEVG00005016164) ENSGEVG00005015994 RAB3B (ENSGEVG00005015931) TXNDC12 (ENSGEVG00005015860) Abingdon island giant tortoise MODERN SPECIES 2267 SLC5A9 (ENSCABG00000013394) #22 SPATA6 (ENSCABG00000013393) #23 ENSCABG00000013392 ENSCABG00000013391 ENSCABG00000013390 ENSCABG00000013388 ENSCABG00000013387 ENSCABG00000013386 Emydidae ANCESTRAL SPECIES 22 ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.c.f ENSGT00940000161441 #7 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 ENSGT00530000063273.a Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 46 ENSTMTG00000008578 ENSTMTG00000008099 #22 ENSTMTG00000008048 #23 ENSTMTG00000008028 #24 ENSTMTG00000007936 #25 ENSTMTG00000007916 #24 ENSTMTG00000007902 ENSTMTG00000007898 ENSTMTG00000007877 ENSTMTG00000007057 ENSTMTG00000007006 Three-toed box turtle MODERN SPECIES 45 ENSTMTG00000006961 ENSTMTG00000006952 ENSTMTG00000006516 #22 ENSTMTG00000006448 #23 ENSTMTG00000006433 #24 ENSTMTG00000006380 #25 ENSTMTG00000006344 #24 ENSTMTG00000005832 ENSTMTG00000005788 ENSTMTG00000004990 ENSTMTG00000004899 painted turtle MODERN SPECIES 698 ENSCPBG00000009018 ENSCPBG00000009058 ENSCPBG00000009449 ENSCPBG00000009470 ENSCPBG00000009505 ENSCPBG00000009551 ENSCPBG00000009792 ENSCPBG00000009909 PDZK1IP1 (ENSCPBG00000009955) #12 TAL1 (ENSCPBG00000009956) #13 STIL (ENSCPBG00000009963) #14 ENSCPBG00000009969 ENSCPBG00000009970 ENSCPBG00000009977 ENSCPBG00000009979 SLC5A9 (ENSCPBG00000009981) #22 SPATA6 (ENSCPBG00000009991) #23 ENSCPBG00000009998 #24 BEND5 (ENSCPBG00000010006) #25 ENSCPBG00000010011 #24 ENSCPBG00000010014 ELAVL4 (ENSCPBG00000010017) DMRTA2 (ENSCPBG00000010018) FAF1 (ENSCPBG00000010024) CDKN2C (ENSCPBG00000010037) RNF11 (ENSCPBG00000010042) TTC39A (ENSCPBG00000010051) EPS15 (ENSCPBG00000010066) OSBPL9 (ENSCPBG00000010097) ENSCPBG00000010301 RAB3B (ENSCPBG00000012333) Chinese turtle MODERN SPECIES 1294 ENSPSIG00000012049 ENSPSIG00000010643 TAL1 (ENSPSIG00000010614) #13 STIL (ENSPSIG00000010417) #14 ENSPSIG00000010159 ENSPSIG00000010073 ENSPSIG00000010057 #18 ENSPSIG00000000303 ENSPSIG00000000298 SLC5A9 (ENSPSIG00000009335) #22 SPATA6 (ENSPSIG00000009039) #23 ENSPSIG00000008990 #24 ENSPSIG00000000294 BEND5 (ENSPSIG00000008975) #25 ENSPSIG00000000289 ELAVL4 (ENSPSIG00000008545) ENSPSIG00000008525 FAF1 (ENSPSIG00000006306) CDKN2C (ENSPSIG00000006283) RNF11 (ENSPSIG00000006280) TTC39A (ENSPSIG00000017765) EPS15 (ENSPSIG00000015754) OSBPL9 (ENSPSIG00000014233) ENSPSIG00000009906 ENSPSIG00000009351 Archosauria ANCESTRAL SPECIES 11 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Aves ANCESTRAL SPECIES 7 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Neognathae ANCESTRAL SPECIES 8 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Neognathae_b ANCESTRAL SPECIES 10 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Great tit MODERN SPECIES 28 DMBX1 (ENSPMJG00000019630) TMEM275 (ENSPMJG00000019631) ENSPMJG00000019632 MOB3C (ENSPMJG00000000048) ATPAF1 (ENSPMJG00000000092) EFCAB14 (ENSPMJG00000000135) ENSPMJG00000000189 ENSPMJG00000000216 PDZK1IP1 (ENSPMJG00000000226) #12 TAL1 (ENSPMJG00000000238) #13 STIL (ENSPMJG00000000254) #14 ENSPMJG00000000275 FOXE1 (ENSPMJG00000000299) FOXD2 (ENSPMJG00000000414) #17 TRABD2B (ENSPMJG00000000435) #18 SLC5A9 (ENSPMJG00000000463) #22 SPATA6 (ENSPMJG00000000488) #23 ENSPMJG00000000555 AGBL4 (ENSPMJG00000000580) #24 BEND5 (ENSPMJG00000000641) #25 ENSPMJG00000000668 ELAVL4 (ENSPMJG00000000678) DMRTA2 (ENSPMJG00000000744) FAF1 (ENSPMJG00000000748) CDKN2C (ENSPMJG00000000777) RNF11 (ENSPMJG00000000863) TTC39A (ENSPMJG00000000876) EPS15 (ENSPMJG00000000916) OSBPL9 (ENSPMJG00000000976) NRDC (ENSPMJG00000000992) RAB3B (ENSPMJG00000001022) Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Flycatcher MODERN SPECIES 27 ENSFALG00000009429 ENSFALG00000009400 ENSFALG00000024196 ENSFALG00000009378 MOB3C (ENSFALG00000009374) ATPAF1 (ENSFALG00000028925) EFCAB14 (ENSFALG00000009363) ENSFALG00000009359 ENSFALG00000009327 PDZK1IP1 (ENSFALG00000009311) #12 TAL1 (ENSFALG00000009303) #13 STIL (ENSFALG00000009298) #14 ENSFALG00000025721 ENSFALG00000009291 TRABD2B (ENSFALG00000005263) #18 SLC5A9 (ENSFALG00000005278) #22 ENSFALG00000025840 SPATA6 (ENSFALG00000005303) #23 ENSFALG00000005309 #24 BEND5 (ENSFALG00000005315) #25 AGBL4 (ENSFALG00000025862) #24 ELAVL4 (ENSFALG00000025747) DMRTA2 (ENSFALG00000005353) FAF1 (ENSFALG00000005360) CDKN2C (ENSFALG00000005371) ENSFALG00000005378 TTC39A (ENSFALG00000005395) EPS15 (ENSFALG00000005442) OSBPL9 (ENSFALG00000005477) NRDC (ENSFALG00000005499) RAB3B (ENSFALG00000005545) Passeriformes_g ANCESTRAL SPECIES 10 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 ENSGT00530000063273.a Medium ground finch MODERN SPECIES 50 SLC5A9 (ENSGFOG00000011742) #22 SPATA6 (ENSGFOG00000011726) #23 TRABD2B (ENSGFOG00000011719) #18 ENSGFOG00000011713 STIL (ENSGFOG00000011699) #14 TAL1 (ENSGFOG00000011696) #13 ENSGFOG00000011241 ENSGFOG00000010906 EFCAB14 (ENSGFOG00000010880) ENSGFOG00000010874 ATPAF1 (ENSGFOG00000010864) MOB3C (ENSGFOG00000010857) ENSGFOG00000010842 DMBX1 (ENSGFOG00000010834) FAAH (ENSGFOG00000010792) ENSGFOG00000010777 Passeroidea ANCESTRAL SPECIES 9 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 ENSGT00530000063273.a Zebra finch MODERN SPECIES 30 TMEM275 (ENSTGUG00000027598) ENSTGUG00000008358 MOB3C (ENSTGUG00000008386) ATPAF1 (ENSTGUG00000008394) ENSTGUG00000019172 EFCAB14 (ENSTGUG00000008408) ENSTGUG00000008418 ENSTGUG00000008524 PDZK1IP1 (ENSTGUG00000008532) #12 TAL1 (ENSTGUG00000008542) #13 STIL (ENSTGUG00000008545) #14 ENSTGUG00000008563 ENSTGUG00000023854 FOXD2 (ENSTGUG00000023676) #17 TRABD2B (ENSTGUG00000028844) #18 SLC5A9 (ENSTGUG00000028559) #22 SPATA6 (ENSTGUG00000025010) #23 AGBL4 (ENSTGUG00000008586) #24 BEND5 (ENSTGUG00000008591) #25 ELAVL4 (ENSTGUG00000008597) DMRTA2 (ENSTGUG00000028863) FAF1 (ENSTGUG00000008610) CDKN2C (ENSTGUG00000026124) RNF11 (ENSTGUG00000022215) TTC39A (ENSTGUG00000008658) EPS15 (ENSTGUG00000008685) OSBPL9 (ENSTGUG00000008771) NRDC (ENSTGUG00000008815) RAB3B (ENSTGUG00000008894) TXNDC12 (ENSTGUG00000008899) BTF3L4 (ENSTGUG00000027297) Common canary MODERN SPECIES 9 ENSSCAG00000003239 DMBX1 (ENSSCAG00000003244) TMEM275 (ENSSCAG00000003248) ENSSCAG00000003252 MOB3C (ENSSCAG00000003260) ATPAF1 (ENSSCAG00000003265) EFCAB14 (ENSSCAG00000003273) ENSSCAG00000003281 ENSSCAG00000003305 PDZK1IP1 (ENSSCAG00000003514) #12 ENSSCAG00000003518 #13 STIL (ENSSCAG00000003537) #14 ENSSCAG00000003547 FOXE1 (ENSSCAG00000003549) TRABD2B (ENSSCAG00000003575) #18 SLC5A9 (ENSSCAG00000003587) #22 SPATA6 (ENSSCAG00000003616) #23 ENSSCAG00000003625 #24 BEND5 (ENSSCAG00000003637) #25 ENSSCAG00000003665 #24 ELAVL4 (ENSSCAG00000003671) FAF1 (ENSSCAG00000003680) CDKN2C (ENSSCAG00000003689) ENSSCAG00000003699 TTC39A (ENSSCAG00000003706) EPS15 (ENSSCAG00000003714) OSBPL9 (ENSSCAG00000003797) NRDC (ENSSCAG00000004323) RAB3B (ENSSCAG00000005800) TXNDC12 (ENSSCAG00000005806) BTF3L4 (ENSSCAG00000005810) Neognathae_c ANCESTRAL SPECIES 7 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 ENSGT00530000063273.a Kakapo MODERN SPECIES 25 TMEM275 (ENSSHBG00005006147) ENSSHBG00005006177 ENSSHBG00005006223 MOB3C (ENSSHBG00005006236) ATPAF1 (ENSSHBG00005006246) EFCAB14 (ENSSHBG00005006278) ENSSHBG00005006306 ENSSHBG00005006437 PDZK1IP1 (ENSSHBG00005007075) #12 TAL1 (ENSSHBG00005007088) #13 STIL (ENSSHBG00005007114) #14 ENSSHBG00005007170 ENSSHBG00005007192 FOXD2 (ENSSHBG00005007218) #17 TRABD2B (ENSSHBG00005007228) #18 SLC5A9 (ENSSHBG00005007272) #22 ENSSHBG00005007346 #23 ENSSHBG00005007361 ENSSHBG00005007379 #23 ENSSHBG00005007400 #24 BEND5 (ENSSHBG00005007417) #25 ENSSHBG00005007432 #24 ELAVL4 (ENSSHBG00005007474) DMRTA2 (ENSSHBG00005007507) FAF1 (ENSSHBG00005007518) CDKN2C (ENSSHBG00005007538) RNF11 (ENSSHBG00005007556) TTC39A (ENSSHBG00005007564) EPS15 (ENSSHBG00005007582) OSBPL9 (ENSSHBG00005007839) NRDC (ENSSHBG00005008330) Galloanserae ANCESTRAL SPECIES 8 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Anatidae ANCESTRAL SPECIES 5 ENSGT00940000161237 ENSGT00940000155505.a ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000155042.b.d #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00940000154690 ENSGT00940000155026.k.a.a ENSGT00940000159943 Duck MODERN SPECIES 26 ENSAPLG00000007374 ENSAPLG00000007474 FAAH (ENSAPLG00000007898) DMBX1 (ENSAPLG00000008404) TMEM275 (ENSAPLG00000018210) ENSAPLG00000008479 MOB3C (ENSAPLG00000009181) ATPAF1 (ENSAPLG00000009308) EFCAB14 (ENSAPLG00000026113) ENSAPLG00000009571 STIL (ENSAPLG00000010138) #14 ENSAPLG00000029939 ENSAPLG00000028912 TRABD2B (ENSAPLG00000007124) #18 ENSAPLG00000022301 SLC5A9 (ENSAPLG00000007144) #22 ENSAPLG00000020726 SPATA6 (ENSAPLG00000007793) #23 ENSAPLG00000007966 #24 BEND5 (ENSAPLG00000008052) #25 ENSAPLG00000018496 ENSAPLG00000023647 #24 ELAVL4 (ENSAPLG00000030449) DMRTA2 (ENSAPLG00000029740) FAF1 (ENSAPLG00000002930) CDKN2C (ENSAPLG00000027339) RNF11 (ENSAPLG00000022113) TTC39A (ENSAPLG00000003729) EPS15 (ENSAPLG00000004292) OSBPL9 (ENSAPLG00000001003) ENSAPLG00000002870 Pink-footed goose MODERN SPECIES 1 ENSABRG00000016807 DMBX1 (ENSABRG00000016803) TMEM275 (ENSABRG00000016800) ENSABRG00000016779 MOB3C (ENSABRG00000016771) ATPAF1 (ENSABRG00000016766) EFCAB14 (ENSABRG00000016757) ENSABRG00000016721 ENSABRG00000016720 PDZK1IP1 (ENSABRG00000016718) #12 TAL1 (ENSABRG00000016716) #13 STIL (ENSABRG00000016714) #14 ENSABRG00000016710 ENSABRG00000016705 TRABD2B (ENSABRG00000016692) #18 SLC5A9 (ENSABRG00000015750) #22 SPATA6 (ENSABRG00000015644) #23 ENSABRG00000015638 #24 BEND5 (ENSABRG00000015631) #25 AGBL4 (ENSABRG00000015624) #24 ELAVL4 (ENSABRG00000015613) DMRTA2 (ENSABRG00000015596) FAF1 (ENSABRG00000015320) CDKN2C (ENSABRG00000015292) RNF11 (ENSABRG00000015288) TTC39A (ENSABRG00000015248) EPS15 (ENSABRG00000014091) OSBPL9 (ENSABRG00000011975) ENSABRG00000008367 RAB3B (ENSABRG00000008096) TXNDC12 (ENSABRG00000008071) Phasianidae ANCESTRAL SPECIES 7 ENSGT00940000161237 ENSGT00390000008086 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a.b ENSGT00940000155751 ENSGT00940000154690.hc.b ENSGT00940000155026.k.a.a ENSGT00940000159943 ENSGT00530000063273.a Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00940000163316.a.a ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00990000204056 ENSGT00530000063821.b.a #23 ENSGT00940000155042.b.c #24 ENSGT00390000001724 #25 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00940000163721 ENSGT00950000182917.a.b.a.b ENSGT00940000155751 ENSGT00940000154690.gc ENSGT00940000154690.hc.b ENSGT00940000155026.k.a.a ENSGT00940000159943 Turkey MODERN SPECIES 1 ENSMGAG00000011090 RAB3B (ENSMGAG00000018796) ENSMGAG00000011030 ENSMGAG00000011057 ENSMGAG00000019881 EPS15 (ENSMGAG00000010996) ENSMGAG00000022271 ENSMGAG00000010980 ENSMGAG00000010982 ENSMGAG00000022627 ENSMGAG00000010948 ELAVL4 (ENSMGAG00000010928) ENSMGAG00000019230 #24 ENSMGAG00000010874 #25 ENSMGAG00000010855 #23 ENSMGAG00000010829 #22 ENSMGAG00000021374 #23 TRABD2B (ENSMGAG00000017913) #18 ENSMGAG00000010792 ENSMGAG00000010814 ENSMGAG00000010795 #14 ENSMGAG00000010823 #13 ENSMGAG00000010752 ENSMGAG00000010784 ENSMGAG00000010747 ENSMGAG00000010732 ENSMGAG00000010730 ENSMGAG00000010722 ENSMGAG00000010718 ENSMGAG00000010681 ENSMGAG00000010684 Chicken MODERN SPECIES 37 NSUN4 (ENSGALG00010023124) ENSGALG00010022999 VDHAP (ENSGALG00010027076) DMBX1 (ENSGALG00010022675) MKNK1 (ENSGALG00010023356) MOB3C (ENSGALG00010022860) ATPAF1 (ENSGALG00010022867) EFCAB14 (ENSGALG00010022874) CYP4B7 (ENSGALG00010022917) PDZK1IP1 (ENSGALG00010022948) #12 TAL1 (ENSGALG00010022991) #13 STIL (ENSGALG00010024669) #14 CMPK1 (ENSGALG00010024686) ENSGALG00010026936 TRABD2B (ENSGALG00010024695) #18 SLC5A9 (ENSGALG00010024728) #22 SPATA6 (ENSGALG00010024758) #23 ENSGALG00010024768 AGBL4 (ENSGALG00010027088) #24 BEND5 (ENSGALG00010024659) #25 ENSGALG00010024774 ELAVL4 (ENSGALG00010022760) DMRTA2 (ENSGALG00010022784) FAF1 (ENSGALG00010024514) CDKN2C (ENSGALG00010024533) RNF11 (ENSGALG00010024551) TTC39A (ENSGALG00010024588) EPS15 (ENSGALG00010024596) ENSGALG00010024599 NRDC (ENSGALG00010024623) OSBPL9 (ENSGALG00010027084) Japanese quail MODERN SPECIES 26 FAAH (ENSCJPG00005010065) DMBX1 (ENSCJPG00005010066) TMEM275 (ENSCJPG00005010069) ENSCJPG00005010070 MOB3C (ENSCJPG00005010071) ATPAF1 (ENSCJPG00005010072) EFCAB14 (ENSCJPG00005010073) ENSCJPG00005010074 ENSCJPG00005010075 TAL1 (ENSCJPG00005010076) #13 STIL (ENSCJPG00005010077) #14 ENSCJPG00005010078 ENSCJPG00005010079 FOXD2 (ENSCJPG00005010080) #17 TRABD2B (ENSCJPG00005010082) #18 SLC5A9 (ENSCJPG00005010085) #22 SPATA6 (ENSCJPG00005010270) #23 ENSCJPG00005010271 AGBL4 (ENSCJPG00005010272) #24 BEND5 (ENSCJPG00005010274) #25 ELAVL4 (ENSCJPG00005010275) DMRTA2 (ENSCJPG00005010277) FAF1 (ENSCJPG00005010278) CDKN2C (ENSCJPG00005010445) RNF11 (ENSCJPG00005010446) TTC39A (ENSCJPG00005010447) EPS15 (ENSCJPG00005010459) OSBPL9 (ENSCJPG00005011698) NRDC (ENSCJPG00005011887) RAB3B (ENSCJPG00005011888) TXNDC12 (ENSCJPG00005011890) African ostrich MODERN SPECIES 578 ENSSCUG00000012351 FAAH (ENSSCUG00000012349) ENSSCUG00000012348 DMBX1 (ENSSCUG00000012347) ENSSCUG00000012346 MOB3C (ENSSCUG00000012345) ATPAF1 (ENSSCUG00000012344) EFCAB14 (ENSSCUG00000012343) ENSSCUG00000012342 ENSSCUG00000012340 PDZK1IP1 (ENSSCUG00000012339) #12 TAL1 (ENSSCUG00000012338) #13 STIL (ENSSCUG00000012337) #14 ENSSCUG00000012336 TRABD2B (ENSSCUG00000012332) #18 SLC5A9 (ENSSCUG00000012331) #22 SPATA6 (ENSSCUG00000012330) #23 AGBL4 (ENSSCUG00000012327) #24 BEND5 (ENSSCUG00000012326) #25 Australian saltwater crocodile MODERN SPECIES 28 RAD54L (ENSCPRG00005017943) DMBX1 (ENSCPRG00005017947) TMEM275 (ENSCPRG00005017950) ENSCPRG00005017951 MOB3C (ENSCPRG00005017953) ATPAF1 (ENSCPRG00005017958) ENSCPRG00005017961 EFCAB14 (ENSCPRG00005017964) ENSCPRG00005017973 ENSCPRG00005017986 ENSCPRG00005018022 TAL1 (ENSCPRG00005018024) #13 STIL (ENSCPRG00005018027) #14 ENSCPRG00005018033 TRABD2B (ENSCPRG00005018038) #18 SLC5A9 (ENSCPRG00005018045) #22 SPATA6 (ENSCPRG00005018049) #23 ENSCPRG00005018057 #24 BEND5 (ENSCPRG00005018063) #25 ENSCPRG00005018070 #24 ELAVL4 (ENSCPRG00005018078) FAF1 (ENSCPRG00005018094) CDKN2C (ENSCPRG00005018099) ENSCPRG00005018102 TTC39A (ENSCPRG00005000251) EPS15 (ENSCPRG00005000597) OSBPL9 (ENSCPRG00005000700) ENSCPRG00005000992 RAB3B (ENSCPRG00005002515) TXNDC12 (ENSCPRG00005002525) BTF3L4 (ENSCPRG00005002529) Anura ANCESTRAL SPECIES 6 ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00940000154586.a ENSGT00390000011196 ENSGT00940000161527.a.b.a ENSGT00940000161527.b ENSGT00940000161527.a.b.b ENSGT00940000154660.b #12 ENSGT00940000159889 #13 ENSGT00390000007310 #14 ENSGT00940000160589 #15 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a #17 ENSGT00940000161273 #18 ENSGT00940000157546 #22 ENSGT00530000063821.b.a #23 ENSGT00940000175969 ENSGT00390000001724 #25 ENSGT00940000155042.b #24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000022264 ENSLLEG00000022306 ENSLLEG00000022482 ENSLLEG00000022725 ENSLLEG00000024624 ENSLLEG00000028380 ENSLLEG00000028546 TAL1 (ENSLLEG00000028576) #13 STIL (ENSLLEG00000028599) #14 CMPK1 (ENSLLEG00000028695) #15 ENSLLEG00000028721 FOXD2 (ENSLLEG00000028734) #17 TRABD2B (ENSLLEG00000028753) #18 ENSLLEG00000028776 ENSLLEG00000028790 #22 ENSLLEG00000028872 #22 ENSLLEG00000029040 SPATA6 (ENSLLEG00000029043) #23 ENSLLEG00000029090 ENSLLEG00000029098 BEND5 (ENSLLEG00000029117) #25 ENSLLEG00000029132 ENSLLEG00000029143 ENSLLEG00000029154 ENSLLEG00000029162 ENSLLEG00000029175 #24 ELAVL4 (ENSLLEG00000029217) DMRTA2 (ENSLLEG00000029483) ENSLLEG00000029835 CDKN2C (ENSLLEG00000029841) RNF11 (ENSLLEG00000029850) Leishan spiny toad MODERN SPECIES 11 MOB3C (ENSLLEG00000022215) ENSLLEG00000022264 ENSLLEG00000022306 ENSLLEG00000022482 ENSLLEG00000022725 ENSLLEG00000024624 ENSLLEG00000028380 ENSLLEG00000028546 TAL1 (ENSLLEG00000028576) #13 STIL (ENSLLEG00000028599) #14 CMPK1 (ENSLLEG00000028695) #15 ENSLLEG00000028721 FOXD2 (ENSLLEG00000028734) #17 TRABD2B (ENSLLEG00000028753) #18 ENSLLEG00000028776 ENSLLEG00000028790 #22 ENSLLEG00000028872 #22 ENSLLEG00000029040 SPATA6 (ENSLLEG00000029043) #23 ENSLLEG00000029090 ENSLLEG00000029098 BEND5 (ENSLLEG00000029117) #25 ENSLLEG00000029132 ENSLLEG00000029143 ENSLLEG00000029154 ENSLLEG00000029162 ENSLLEG00000029175 #24 ELAVL4 (ENSLLEG00000029217) DMRTA2 (ENSLLEG00000029483) ENSLLEG00000029835 CDKN2C (ENSLLEG00000029841) Frog MODERN SPECIES 4 mob3c (ENSXETG00000016355) atpaf1 (ENSXETG00000024499) ccnb1.2 (ENSXETG00000016354) efcab14 (ENSXETG00000016352) cyp4b1 (ENSXETG00000024498) cyp4b1.5 (ENSXETG00000040829) cyp4b1.4 (ENSXETG00000024496) pdzk1ip1 (ENSXETG00000032460) #12 tal1 (ENSXETG00000041260) #13 stil (ENSXETG00000016343) #14 cmpk1 (ENSXETG00000043840) #15 foxe3 (ENSXETG00000016339) foxd2 (ENSXETG00000047367) #17 ENSXETG00000037072 trabd2b (ENSXETG00000035683) #18 slc5a9 (ENSXETG00000006935) #22 ENSXETG00000042521 ENSXETG00000044812 ENSXETG00000042689 #23 ENSXETG00000037622 agbl4 (ENSXETG00000008687) #25 ENSXETG00000035079 ppp1r26 (ENSXETG00000008680) dmrta2 (ENSXETG00000002846) faf1 (ENSXETG00000002841) cdkn2c (ENSXETG00000033220) rnf11 (ENSXETG00000002837) ttc39a (ENSXETG00000002835) eps15 (ENSXETG00000002833) actr3 (ENSXETG00000002832) osbpl9 (ENSXETG00000002831) Coelacanth MODERN SPECIES 310 ENSLACG00000017576 #18 ENSLACG00000017141 zgc:171480 (ENSLACG00000016281) SLC5A9 (ENSLACG00000016140) #22 SPATA6 (ENSLACG00000015897) #23 BEND5 (ENSLACG00000012193) #25 ENSLACG00000010227 Actinopterygii ANCESTRAL SPECIES 189 ENSGT00390000012765 ENSGT00940000165098 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000157668 ENSGT00940000155136 ENSGT01040000244250 ENSGT00940000159889.b.b #13 ENSGT00390000007310 #14 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988 ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.a.a ENSGT00940000154690 ENSGT00940000155026 ENSGT00940000159943 Reedfish MODERN SPECIES 1 zbtb37 (ENSECRG00000011280) serpinc1 (ENSECRG00000009998) rc3h1a (ENSECRG00000009981) GPR52 (ENSECRG00000009965) RABGAP1L (ENSECRG00000009946) atpaf1 (ENSECRG00000009928) ENSECRG00000009916 frem1b (ENSECRG00000009851) nfia (ENSECRG00000009794) tm2d1 (ENSECRG00000009762) PATJ (ENSECRG00000009615) ENSECRG00000009566 tal1 (ENSECRG00000009558) #13 stil (ENSECRG00000009542) #14 zgc:171480 (ENSECRG00000009525) slc5a9 (ENSECRG00000009464) #22 spata6 (ENSECRG00000009395) ##23 AGBL4 (ENSECRG00000009373) ##24 bend5 (ENSECRG00000009353) #25 agbl4 (ENSECRG00000009332) ##24 elavl4 (ENSECRG00000009035) ENSECRG00000008927 dmrta2 (ENSECRG00000008913) faf1 (ENSECRG00000008876) cdkn2c (ENSECRG00000008847) rnf11b (ENSECRG00000008822) TTC39A (ENSECRG00000008798) EPS15 (ENSECRG00000008774) calr (ENSECRG00000008755) osbpl9 (ENSECRG00000008702) nrd1b (ENSECRG00000008630) Neopterygii ANCESTRAL SPECIES 222 ENSGT00510000048142 ENSGT00510000047658 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00940000155042.b #24 ENSGT00390000001724 #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.b ENSGT00950000182917.a.b.a ENSGT00940000155751 ENSGT00950000182915.b.b.a.a Spotted gar MODERN SPECIES 648 TTC39A (ENSLOCG00000009436) ENSLOCG00000009453 calr (ENSLOCG00000009468) mfsd14a1 (ENSLOCG00000009483) bcar3 (ENSLOCG00000009489) fnbp1l (ENSLOCG00000009505) si:ch211-198n5.11 (ENSLOCG00000009522) rpe65b (ENSLOCG00000009534) depdc1a (ENSLOCG00000009559) LRRC7 (ENSLOCG00000009583) lrrc40 (ENSLOCG00000009608) srsf11 (ENSLOCG00000009617) paox1 (ENSLOCG00000009627) dnttip2 (ENSLOCG00000009635) gclm (ENSLOCG00000009650) slc5a9 (ENSLOCG00000009664) #22 ENSLOCG00000009682 ENSLOCG00000009719 soat1 (ENSLOCG00000009767) abl2 (ENSLOCG00000009782) tor3a (ENSLOCG00000009789) osbpl9 (ENSLOCG00000009802) xpr1a (ENSLOCG00000009831) ENSLOCG00000009849 nrd1b (ENSLOCG00000009851) ENSLOCG00000009886 ENSLOCG00000009890 frem1b (ENSLOCG00000009896) nfia (ENSLOCG00000009919) tm2d1 (ENSLOCG00000009936) PATJ (ENSLOCG00000009943) Osteoglossocephalai ANCESTRAL SPECIES 140 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.b ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a Osteoglossiformes ANCESTRAL SPECIES 2 ENSGT00390000007688 ENSGT01100000263525.a.b.b.i ENSGT00530000063936.b.h ENSGT00940000156348.B ENSGT00390000011196 ENSGT00940000159289.j ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b.m ENSGT00940000154130.a.a.b.i ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00390000001724.l #25 ENSGT00940000155042.a.a ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.b ENSGT00950000182917.a.b.a.f ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b ENSGT00940000154690 P. kingsleyae MODERN SPECIES 187 fnbp1l (ENSPKIG00000006627) bcar3 (ENSPKIG00000006682) ENSPKIG00000006723 paox1 (ENSPKIG00000006736) zgc:171480 (ENSPKIG00000006753) slc5a9 (ENSPKIG00000006772) #22 gclm (ENSPKIG00000006800) ENSPKIG00000006816 spata6 (ENSPKIG00000006841) ##23 bend5 (ENSPKIG00000006874) #25 agbl4 (ENSPKIG00000006913) ##24 elavl4 (ENSPKIG00000006999) dmrta2 (ENSPKIG00000007101) faf1 (ENSPKIG00000007114) cdkn2c (ENSPKIG00000007146) RNF11 (ENSPKIG00000007154) TTC39A (ENSPKIG00000007193) ENSPKIG00000007277 calr (ENSPKIG00000007335) tor3a (ENSPKIG00000007356) osbpl9 (ENSPKIG00000007417) Asian bonytongue MODERN SPECIES 24 ENSSFOG00015029684 negr1 (ENSSFOG00015014749) zranb2 (ENSSFOG00015014775) PTGER3 (ENSSFOG00015014795) cthl (ENSSFOG00015014815) ankrd13c (ENSSFOG00015014850) srsf11 (ENSSFOG00015027370) lrrc40 (ENSSFOG00015014904) LRRC7 (ENSSFOG00015014990) depdc1a (ENSSFOG00015015357) rpe65b (ENSSFOG00015015412) si:ch211-198n5.11 (ENSSFOG00015015467) fnbp1l (ENSSFOG00015015513) bcar3 (ENSSFOG00015015564) paox1 (ENSSFOG00015015650) slc5a9 (ENSSFOG00015015681) #22 gclm (ENSSFOG00015015714) dnttip2 (ENSSFOG00015015734) spata6 (ENSSFOG00015027065) ##23 bend5 (ENSSFOG00015015785) #25 AGBL4 (ENSSFOG00015015795) ##24 elavl4 (ENSSFOG00015015838) dmrta2 (ENSSFOG00015015895) faf1 (ENSSFOG00015015918) cdkn2c (ENSSFOG00015025573) RNF11 (ENSSFOG00015029801) EPS15 (ENSSFOG00015016011) calr (ENSSFOG00015016048) tor3a (ENSSFOG00015027062) osbpl9 (ENSSFOG00015016204) ENSSFOG00015024564 Clupeocephala ANCESTRAL SPECIES 103 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Otomorpha ANCESTRAL SPECIES 53 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Clupeiformes ANCESTRAL SPECIES 111 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00390000001724.l #25 ENSGT00940000155042.a.a ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.b.f ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000183153.c.b.a.a ENSGT00390000001652.f.b ENSGT00940000156022.b Atlantic herring MODERN SPECIES 1 ADGRL2 (ENSCHAG00000015107) adgrl4 (ENSCHAG00000014849) vtg3 (ENSCHAG00000012438) negr1 (ENSCHAG00000012385) zranb2 (ENSCHAG00000012367) PTGER3 (ENSCHAG00000012359) ankrd13c (ENSCHAG00000012050) LRRC7 (ENSCHAG00000011575) depdc1a (ENSCHAG00000011503) rpe65b (ENSCHAG00000010933) si:ch211-198n5.11 (ENSCHAG00000010738) fnbp1l (ENSCHAG00000010108) bcar3 (ENSCHAG00000009829) paox1 (ENSCHAG00000009791) zgc:171480 (ENSCHAG00000009784) slc5a9 (ENSCHAG00000009121) #22 gclm (ENSCHAG00000009037) ENSCHAG00000009014 spata6 (ENSCHAG00000008998) ##23 AGBL4 (ENSCHAG00000008915) ##24 elavl4 (ENSCHAG00000008272) dmrta2 (ENSCHAG00000008219) faf1 (ENSCHAG00000005915) cdkn2c (ENSCHAG00000005802) ENSCHAG00000005784 TTC39A (ENSCHAG00000003431) EPS15 (ENSCHAG00000003036) zgc:92591 (ENSCHAG00000002983) tp63 (ENSCHAG00000001532) tprg1 (ENSCHAG00000001439) ENSCHAG00000001411 Denticle herring MODERN SPECIES 4 negr1 (ENSDCDG00000034960) zranb2 (ENSDCDG00000034966) PTGER3 (ENSDCDG00000034969) cthl (ENSDCDG00000034987) ankrd13c (ENSDCDG00000003135) srsf11 (ENSDCDG00000003231) lrrc40 (ENSDCDG00000003268) LRRC7 (ENSDCDG00000003363) depdc1a (ENSDCDG00000003571) rpe65c (ENSDCDG00000003616) si:ch211-198n5.11 (ENSDCDG00000003959) fnbp1l (ENSDCDG00000004000) bcar3 (ENSDCDG00000004556) paox1 (ENSDCDG00000004570) zgc:171480 (ENSDCDG00000004575) slc5a9 (ENSDCDG00000004636) #22 gclm (ENSDCDG00000005066) ENSDCDG00000005072 spata6 (ENSDCDG00000005081) ##23 AGBL4 (ENSDCDG00000005104) ##24 bend5 (ENSDCDG00000005117) #25 elavl4 (ENSDCDG00000005159) dmrta2 (ENSDCDG00000005360) faf1 (ENSDCDG00000005390) cdkn2c (ENSDCDG00000010020) RNF11 (ENSDCDG00000010028) TTC39A (ENSDCDG00000010326) EPS15 (ENSDCDG00000015400) tp63 (ENSDCDG00000016275) tprg1 (ENSDCDG00000018026) lpp (ENSDCDG00000018041) Otophysi ANCESTRAL SPECIES 240 ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000159443 ENSGT00940000157511 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Characiphysae ANCESTRAL SPECIES 30 ENSGT00950000183119.a.b ENSGT00940000159166 ENSGT00940000156024.i.a ENSGT00950000182945.b.a.a.a.a.b.b ENSGT00940000155644.a.a ENSGT00940000154955.b ENSGT00390000004248 ENSGT00390000014577.b ENSGT00940000167828 ENSGT00940000154570.a.b ENSGT00390000009278.b ENSGT00940000153838.b ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Channel catfish MODERN SPECIES 24 ENSIPUG00000000973 col (ENSIPUG00000000976) lhfpl5b (ENSIPUG00000000993) ENSIPUG00000001014 SLC16A1 (ENSIPUG00000001030) zmynd12 (ENSIPUG00000001040) rimkla (ENSIPUG00000001046) ENSIPUG00000001052 kazna (ENSIPUG00000001058) kazna (ENSIPUG00000001083) Tmem51 (ENSIPUG00000001091) abl2 (ENSIPUG00000001109) fnbp1l (ENSIPUG00000001200) bcar3 (ENSIPUG00000001226) mrpl55 (ENSIPUG00000001273) slc5a9 (ENSIPUG00000001280) #22 gclm (ENSIPUG00000001300) dnttip2 (ENSIPUG00000001308) spata6 (ENSIPUG00000001314) ##23 AGBL4 (ENSIPUG00000001331) ##24 bend5 (ENSIPUG00000001350) #25 agbl4 (ENSIPUG00000001359) ##24 elavl4 (ENSIPUG00000001381) dmrta2 (ENSIPUG00000001399) faf1 (ENSIPUG00000001417) cdkn2c (ENSIPUG00000001472) rnf11 (ENSIPUG00000001479) ttc39a (ENSIPUG00000001503) eps15 (ENSIPUG00000001636) calr (ENSIPUG00000001657) TOR3A (ENSIPUG00000001675) Characiphysae_b ANCESTRAL SPECIES 34 ENSGT00940000155343.a.a ENSGT00940000159166 ENSGT00940000156024.i.a ENSGT00950000182945.b.a.a.a.a.b.b ENSGT00940000155644.a.a ENSGT00940000154955.b ENSGT00390000004248 ENSGT00390000014577.b ENSGT00940000167828 ENSGT00940000154570.a.b ENSGT00390000009278.b ENSGT00940000153838.b ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Characoidei ANCESTRAL SPECIES 77 ENSGT00940000155343.a.a ENSGT00940000159166 ENSGT00940000156024.i.a ENSGT00950000182945.b.a.a.a.a.b.b ENSGT00940000155644.a.a ENSGT00940000154955.b ENSGT00390000004248 ENSGT00390000014577.b ENSGT00940000167828 ENSGT00940000154570.a.b ENSGT00390000009278.b ENSGT00940000153838.b ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT01030000234965 ENSGT00950000182888.a.a.b Red-bellied piranha MODERN SPECIES 28 MOV10 (ENSPNAG00000017939) ENSPNAG00000017916 rhocb (ENSPNAG00000017896) tafa3b (ENSPNAG00000017715) slc16a1b (ENSPNAG00000017696) zmynd12 (ENSPNAG00000017676) rimkla (ENSPNAG00000017669) ENSPNAG00000017649 kazna (ENSPNAG00000017625) tmem51a (ENSPNAG00000005790) abl2 (ENSPNAG00000017552) fnbp1l (ENSPNAG00000003480) bcar3 (ENSPNAG00000017382) paox1 (ENSPNAG00000017334) zgc:171480 (ENSPNAG00000017309) slc5a9 (ENSPNAG00000017301) #22 gclm (ENSPNAG00000017250) dnttip2 (ENSPNAG00000017234) spata6 (ENSPNAG00000017223) ##23 AGBL4 (ENSPNAG00000017209) ##24 bend5 (ENSPNAG00000017186) #25 elavl4 (ENSPNAG00000017169) dmrta2 (ENSPNAG00000017040) faf1 (ENSPNAG00000017029) cdkn2c (ENSPNAG00000016988) rnf11b (ENSPNAG00000016982) TTC39A (ENSPNAG00000016968) EPS15 (ENSPNAG00000016839) ENSPNAG00000016813 tor3a (ENSPNAG00000016760) osbpl9 (ENSPNAG00000016711) Mexicana tetra MODERN SPECIES 21 hspa1b (ENSAMXG00000026104) ahcyl1 (ENSAMXG00000040818) nfyal (ENSAMXG00000033899) slc16a1b (ENSAMXG00000000023) zmynd12 (ENSAMXG00000032499) rimkla (ENSAMXG00000000034) ENSAMXG00000000036 ENSAMXG00000039285 kazna (ENSAMXG00000030117) tmem51a (ENSAMXG00000032721) abl2 (ENSAMXG00000002300) fnbp1l (ENSAMXG00000029673) bcar3 (ENSAMXG00000031215) paox1 (ENSAMXG00000015493) zgc:171480 (ENSAMXG00000043839) slc5a9 (ENSAMXG00000015433) #22 gclm (ENSAMXG00000042967) ENSAMXG00000037295 spata6 (ENSAMXG00000031993) ##23 bend5 (ENSAMXG00000015339) #25 AGBL4 (ENSAMXG00000034961) ##24 agbl4 (ENSAMXG00000040007) ##24 elavl4 (ENSAMXG00000000687) dmrta2 (ENSAMXG00000039840) faf1 (ENSAMXG00000018458) cdkn2c (ENSAMXG00000035324) rnf11b (ENSAMXG00000030529) TTC39A (ENSAMXG00000034026) ENSAMXG00000040809 ENSAMXG00000042961 EPS15 (ENSAMXG00000041089) Electric eel MODERN SPECIES 50 mov10b.1 (ENSEEEG00000001881) rhocb (ENSEEEG00000001855) tafa3b (ENSEEEG00000001854) slc16a1b (ENSEEEG00000001852) zmynd12 (ENSEEEG00000001849) rimkla (ENSEEEG00000001846) ENSEEEG00000001845 ENSEEEG00000001843 kazna (ENSEEEG00000001842) tmem51a (ENSEEEG00000001839) abl2 (ENSEEEG00000001837) fnbp1l (ENSEEEG00000001813) bcar3 (ENSEEEG00000001806) paox1 (ENSEEEG00000001804) zgc:171480 (ENSEEEG00000001802) slc5a9 (ENSEEEG00000001752) #22 gclm (ENSEEEG00000001742) dnttip2 (ENSEEEG00000001741) spata6 (ENSEEEG00000001740) ##23 AGBL4 (ENSEEEG00000001732) ##24 elavl4 (ENSEEEG00000001533) dmrta2 (ENSEEEG00000001514) faf1 (ENSEEEG00000001084) cdkn2c (ENSEEEG00000001064) ENSEEEG00000001063 Cyprinoidei ANCESTRAL SPECIES 7 ENSGT00390000003022 ENSGT00950000183017.b.b.a.b.a ENSGT00940000159560 ENSGT00500000044895 ENSGT00940000157458 ENSGT00940000157906 ENSGT00940000159504 ENSGT00940000155130 ENSGT00940000155601.g ENSGT00940000163668 ENSGT00950000183081.a.a.a ENSGT00940000153838.b ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l.e #25 ENSGT00390000001724.l.f #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 531 ENSGT00950000183047.c.b.f ENSGT00940000154130.a.a.b.l ENSGT00940000157546.m #22 ENSGT00510000047658.a ENSGT00650000094816 ENSGT00530000063821.a.a ##23 ENSGT00940000155042.a.a.b ##24 ENSGT00940000157399.g.b ENSGT00940000161649.c.a ENSGT00940000154831.e ENSGT00940000160194.g.a ENSGT00730000110988.wb.a.a ENSGT00950000182917.a.b.a.h ENSGT00940000155751.a.b ENSGT00950000182915.b.b.a.a.ab.b ENSGT00950000182888.a.a.b.d ENSGT00940000154690.a.a ENSGT00940000164186.a Goldfish MODERN SPECIES 48 ENSCARG00000007387 ENSCARG00000007480 guk1b (ENSCARG00000007499) RNF220 (ENSCARG00000007525) dmap1 (ENSCARG00000007552) ENSCARG00000007631 ENSCARG00000007681 ENSCARG00000007695 zgc:153738 (ENSCARG00000007716) alkal1 (ENSCARG00000007858) ENSCARG00000007866 BEND5 (ENSCARG00000007890) #25 abl2 (ENSCARG00000007910) fnbp1l (ENSCARG00000008028) bcar3 (ENSCARG00000008056) slc5a9 (ENSCARG00000008118) #22 gclm (ENSCARG00000008347) ENSCARG00000008363 spata6 (ENSCARG00000008371) ##23 lhx4 (ENSCARG00000008388) acbd6 (ENSCARG00000008403) CEP350 (ENSCARG00000008438) qsox1 (ENSCARG00000008541) lhx4 (ENSCARG00000008563) xpr1a (ENSCARG00000008607) sin3b (ENSCARG00000008716) def6a (ENSCARG00000008852) ndufb11 (ENSCARG00000008881) ENSCARG00000008889 tpk2 (ENSCARG00000008894) bgna (ENSCARG00000008919) Cyprininae_a ANCESTRAL SPECIES 488 ENSGT00500000044895.f.a.a ENSGT00940000157458.i ENSGT00940000157906.n ENSGT00940000159504.n ENSGT00940000155130.i ENSGT00940000155601.g.eb ENSGT00950000183081.a.a.a.o.a ENSGT00940000153838.b.d ENSGT00950000183047.c.b.f ENSGT00940000154130.a.a.b.l ENSGT00940000165232.b ENSGT00940000157546.m #22 ENSGT00510000047658.a ENSGT00650000094816 ENSGT00530000063821.a.a ##23 ENSGT00940000155042.a.a.b ##24 Common carp reference MODERN SPECIES 23 tpk2 (ENSCCRG00000025408) ndufb11 (ENSCCRG00000025404) def6a (ENSCCRG00000010984) sin3b (ENSCCRG00000011013) xpr1a (ENSCCRG00000010995) acbd6 (ENSCCRG00000018010) lhx4 (ENSCCRG00000063647) qsox1 (ENSCCRG00000073944) CEP350 (ENSCCRG00000036598) ENSCCRG00000002425 soat1 (ENSCCRG00000035669) abl2 (ENSCCRG00000035586) fnbp1l (ENSCCRG00000074803) bcar3 (ENSCCRG00000079199) zgc:171480 (ENSCCRG00000023323) slc5a9 (ENSCCRG00000023332) #22 gclm (ENSCCRG00000023416) dnttip2 (ENSCCRG00000023426) spata6 (ENSCCRG00000057791) ##23 AGBL4 (ENSCCRG00000073136) ##24 elavl4 (ENSCCRG00000081829) dmrta2 (ENSCCRG00000066483) faf1 (ENSCCRG00000011112) cdkn2c (ENSCCRG00000053613) TTC39A (ENSCCRG00000029816) EPS15 (ENSCCRG00000001486) calr (ENSCCRG00000001424) tor3a (ENSCCRG00000001394) osbpl9 (ENSCCRG00000006487) si:ch211-198n5.11 (ENSCCRG00000029793) ENSCCRG00000029698 Golden-line barbel MODERN SPECIES 258 ndufb11 (ENSSGRG00000031174) def6a (ENSSGRG00000031176) sin3b (ENSSGRG00000031202) ENSSGRG00000031207 acbd6 (ENSSGRG00000031210) lhx4 (ENSSGRG00000031213) qsox1 (ENSSGRG00000031215) CEP350 (ENSSGRG00000031217) ENSSGRG00000031220 CACNA1E (ENSSGRG00000031223) soat1 (ENSSGRG00000031225) abl2 (ENSSGRG00000031226) fnbp1l (ENSSGRG00000031251) bcar3 (ENSSGRG00000033006) paox1 (ENSSGRG00000033009) slc5a9 (ENSSGRG00000033011) #22 gclm (ENSSGRG00000033012) ENSSGRG00000033013 spata6 (ENSSGRG00000033014) ##23 AGBL4 (ENSSGRG00000033015) ##24 BEND5 (ENSSGRG00000033016) #25 agbl4 (ENSSGRG00000033018) ##24 Cyprininae ANCESTRAL SPECIES 6 ENSGT00390000003022.b ENSGT00950000183017.b.b.a.b.a.a ENSGT00940000159560.a ENSGT00500000044895.f.a.b ENSGT00940000157458.j ENSGT00940000157906.m ENSGT00940000159504.m ENSGT00940000155130.j ENSGT00940000155601.g.db ENSGT00950000183081.a.a.a.o.b ENSGT00940000153838.b.c ENSGT00950000183047.c.b.e ENSGT00940000154130.a.a.b.k ENSGT00940000157511.x ENSGT00940000165232 ENSGT00940000157546.n #22 ENSGT00510000047658.b ENSGT00510000048142 ENSGT00530000063821.a.b ##23 ENSGT00940000155042.a.a.a ##24 ENSGT00390000001724.l.e #25 ENSGT00940000157399.g.a ENSGT00940000161649.c.b ENSGT00940000154831.f ENSGT00940000160194.g.b ENSGT00730000110988.wb.a.b ENSGT00950000182917.a.b.a.g ENSGT00940000155751.a.a ENSGT00950000182915.b.b.a.a.ab.a ENSGT00950000182888.a.a.b.c ENSGT00940000154690.a.b Cyprininae_a ANCESTRAL SPECIES 115 ENSGT00940000159560.a ENSGT00500000044895.f.a.b ENSGT00940000164519.c.b ENSGT00940000157458.j ENSGT00940000157906.m ENSGT00940000159504.m ENSGT00940000155130.j ENSGT00940000155601.g.db ENSGT00940000163668 ENSGT00950000183081.a.a.a.o.b ENSGT00940000153838.b.c ENSGT00950000183047.c.b.e ENSGT00940000154130.a.a.b.k ENSGT00940000157511.x ENSGT00940000165232.a ENSGT00940000157546.n #22 ENSGT00510000047658.b ENSGT00510000048142 ENSGT00530000063821.a.b ##23 ENSGT00940000155042.a.a.a ##24 ENSGT00390000001724.l.e #25 ENSGT00940000157399.g.a ENSGT00940000161649.c.b ENSGT00940000154831.f ENSGT00940000160194.g.b ENSGT00730000110988.wb.a.b ENSGT00950000182917.a.b.a.g ENSGT00940000155751.a.a ENSGT00950000182915.b.b.a.a.ab.a ENSGT00950000182888.a.a.b.c ENSGT00940000154690.a.b Common carp reference MODERN SPECIES 17 def6a (ENSCCRG00000011087) sin3b (ENSCCRG00000010949) xpr1a (ENSCCRG00000033596) acbd6 (ENSCCRG00000057521) lhx4 (ENSCCRG00000052776) qsox1 (ENSCCRG00000036615) CEP350 (ENSCCRG00000033583) ENSCCRG00000077570 ENSCCRG00000064781 soat1 (ENSCCRG00000056506) abl2 (ENSCCRG00000066635) fnbp1l (ENSCCRG00000035347) bcar3 (ENSCCRG00000059518) paox1 (ENSCCRG00000035280) zgc:171480 (ENSCCRG00000074058) slc5a9 (ENSCCRG00000004378) #22 gclm (ENSCCRG00000021467) spata6 (ENSCCRG00000021474) ##23 BEND5 (ENSCCRG00000060382) #25 elavl4 (ENSCCRG00000038365) dmrta2 (ENSCCRG00000082606) faf1 (ENSCCRG00000011182) cdkn2c (ENSCCRG00000064172) rnf11b (ENSCCRG00000077802) TTC39A (ENSCCRG00000042342) ENSCCRG00000002042 calr (ENSCCRG00000002023) tor3a (ENSCCRG00000002014) osbpl9 (ENSCCRG00000006861) ENSCCRG00000004212 depdc1a (ENSCCRG00000034832) Golden-line barbel MODERN SPECIES 15 ndufb11 (ENSSGRG00000002605) def6a (ENSSGRG00000002609) sin3b (ENSSGRG00000002730) xpr1a (ENSSGRG00000003431) acbd6 (ENSSGRG00000005574) lhx4 (ENSSGRG00000005639) qsox1 (ENSSGRG00000005642) CEP350 (ENSSGRG00000005652) ENSSGRG00000005666 ENSSGRG00000005667 abl2 (ENSSGRG00000005672) fnbp1l (ENSSGRG00000005752) bcar3 (ENSSGRG00000006475) ENSSGRG00000006489 zgc:171480 (ENSSGRG00000006490) slc5a9 (ENSSGRG00000006504) #22 gclm (ENSSGRG00000006895) ENSSGRG00000006897 spata6 (ENSSGRG00000006899) ##23 AGBL4 (ENSSGRG00000006900) ##24 elavl4 (ENSSGRG00000006913) dmrta2 (ENSSGRG00000007156) faf1 (ENSSGRG00000007162) cdkn2c (ENSSGRG00000008333) rnf11b (ENSSGRG00000008334) TTC39A (ENSSGRG00000008336) ENSSGRG00000008561 ENSSGRG00000009099 osbpl9 (ENSSGRG00000009352) ENSSGRG00000009716 RPE65 (ENSSGRG00000009718) Zebrafish MODERN SPECIES 23 def6a (ENSDARG00000012247) sin3b (ENSDARG00000062472) xpr1a (ENSDARG00000062449) acbd6 (ENSDARG00000039456) lhx4 (ENSDARG00000039458) qsox1 (ENSDARG00000039459) CEP350 (ENSDARG00000058000) CACNA1E (ENSDARG00000062346) ENSDARG00000002295 soat1 (ENSDARG00000062297) abl2 (ENSDARG00000013841) fnbp1l (ENSDARG00000020131) bcar3 (ENSDARG00000016981) paox1 (ENSDARG00000043403) zgc:171480 (ENSDARG00000043402) slc5a9 (ENSDARG00000005518) #22 gclm (ENSDARG00000018953) dnttip2 (ENSDARG00000057648) spata6 (ENSDARG00000021115) ##23 AGBL4 (ENSDARG00000110838) ##24 bend5 (ENSDARG00000075624) #25 agbl4 (ENSDARG00000068050) ##24 elavl4 (ENSDARG00000045639) dmrta2 (ENSDARG00000039412) faf1 (ENSDARG00000022418) cdkn2c (ENSDARG00000057610) rnf11b (ENSDARG00000040635) TTC39A (ENSDARG00000074126) EPS15 (ENSDARG00000078216) calr (ENSDARG00000076290) tor3a (ENSDARG00000079308) Euteleosteomorpha ANCESTRAL SPECIES 157 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Acanthomorphata ANCESTRAL SPECIES 280 ENSGT00510000046760.b ENSGT00390000008489 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a ENSGT00390000007212 ENSGT00390000012434 ENSGT00950000182993.A.a.i ENSGT00390000005338 ENSGT00940000165232 ENSGT00940000157546 #22 Euacanthomorphacea ANCESTRAL SPECIES 79 ENSGT00940000155981.h ENSGT01030000234624.b.b.c.a.b ENSGT01030000234624.b.b.c.a.a ENSGT00940000153229.A.a.b ENSGT00940000158019 ENSGT00510000046760.b ENSGT00390000008489 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a ENSGT00390000007212 ENSGT00390000012434 ENSGT00950000182993.A.a.i ENSGT00390000005338 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00390000000263 ENSGT00950000183070.a.a.mb.b ENSGT00940000175684 ENSGT00950000182916.b ENSGT00390000006932 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00940000165304 ENSGT00940000156968 Percomorphaceae ANCESTRAL SPECIES 101 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00390000000263 ENSGT00950000183070.a.a.mb.b ENSGT00940000156968 ENSGT00950000182916.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00940000160141.e.b ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a Tiger tail seahorse DUPLICATION Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 473 ENSHCOG00000020962 reep6 (ENSHCOG00000020988) thop1 (ENSHCOG00000021001) ENSHCOG00000021043 ENSHCOG00000003266 tm2d1 (ENSHCOG00000003285) nfia (ENSHCOG00000003301) frem1b (ENSHCOG00000003404) SAMD9L (ENSHCOG00000003432) nrd1b (ENSHCOG00000003475) ENSHCOG00000003486 ENSHCOG00000003501 #22 ctns (ENSHCOG00000003511) zgc:171480 (ENSHCOG00000003526) ndufa11 (ENSHCOG00000003540) ENSHCOG00000003563 #22 ENSHCOG00000003573 slc5a9 (ENSHCOG00000003593) #22 ENSHCOG00000003598 akr1a1b (ENSHCOG00000003614) slc1a7b (ENSHCOG00000003634) PODN (ENSHCOG00000003648) Tiger tail seahorse MODERN SPECIES 473 PODN (ENSHCOG00000003648) slc1a7b (ENSHCOG00000003634) akr1a1b (ENSHCOG00000003614) ENSHCOG00000003598 slc5a9 (ENSHCOG00000003593) #22 ENSHCOG00000003573 ENSHCOG00000003563 #22 ndufa11 (ENSHCOG00000003540) zgc:171480 (ENSHCOG00000003526) ctns (ENSHCOG00000003511) ENSHCOG00000003501 #22 ENSHCOG00000003486 nrd1b (ENSHCOG00000003475) SAMD9L (ENSHCOG00000003432) frem1b (ENSHCOG00000003404) nfia (ENSHCOG00000003301) tm2d1 (ENSHCOG00000003285) ENSHCOG00000003266 ENSHCOG00000021043 thop1 (ENSHCOG00000021001) reep6 (ENSHCOG00000020988) ENSHCOG00000020962 ENSHCOG00000020925 sgta (ENSHCOG00000020910) C19orf25 (ENSHCOG00000020861) ENSHCOG00000020853 Tiger tail seahorse MODERN SPECIES 473 thop1 (ENSHCOG00000021001) ENSHCOG00000021043 ENSHCOG00000003266 tm2d1 (ENSHCOG00000003285) nfia (ENSHCOG00000003301) frem1b (ENSHCOG00000003404) SAMD9L (ENSHCOG00000003432) nrd1b (ENSHCOG00000003475) ENSHCOG00000003486 ENSHCOG00000003501 #22 ctns (ENSHCOG00000003511) zgc:171480 (ENSHCOG00000003526) ndufa11 (ENSHCOG00000003540) ENSHCOG00000003563 #22 ENSHCOG00000003573 slc5a9 (ENSHCOG00000003593) #22 ENSHCOG00000003598 akr1a1b (ENSHCOG00000003614) slc1a7b (ENSHCOG00000003634) PODN (ENSHCOG00000003648) Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000158019 ENSGT00940000153229.A.a.b ENSGT01030000234624.b.b.c.a.a ENSGT01030000234624.b.b.c.a.b.d Atherinomorphae ANCESTRAL SPECIES 40 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000012434 ENSGT00940000165232 ENSGT00390000005338 ENSGT00940000157546 #22 ENSGT00390000000568 ENSGT00940000155528.t.d.a ENSGT00940000157639 ENSGT00390000000289 ENSGT00940000161021.a.a ENSGT00390000013329 ENSGT00940000160280.c ENSGT00390000003821 ENSGT00940000167285 ENSGT00940000160580.a ENSGT00940000160221.c ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00940000159943 Cyprinodontiformes ANCESTRAL SPECIES 71 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000012434 ENSGT00940000165232 ENSGT00390000005338 ENSGT00940000157546 #22 ENSGT00390000000568 Aplocheiloidei ANCESTRAL SPECIES 572 ENSGT00940000157546 #22 ENSGT01030000234624.b.b.c.a.a Mangrove rivulus MODERN SPECIES 170 ENSKMAG00000015896 ENSKMAG00000015870 rpl23 (ENSKMAG00000015811) ENSKMAG00000015784 timm29 (ENSKMAG00000015770) yipf2 (ENSKMAG00000015752) mpp2a (ENSKMAG00000015668) pyya (ENSKMAG00000015638) aoc2 (ENSKMAG00000015623) kcnc3a (ENSKMAG00000015557) ube2z (ENSKMAG00000015515) ENSKMAG00000015493 ENSKMAG00000015486 ENSKMAG00000015478 slc5a9 (ENSKMAG00000015453) #22 gps1 (ENSKMAG00000015409) ENSKMAG00000015264 ENSKMAG00000015202 tspan4b (ENSKMAG00000015180) ENSKMAG00000015150 Turquoise killifish MODERN SPECIES 1621 ccr10 (ENSNFUG00015024290) ENSNFUG00015024288 Nfu_g_1_000811 (ENSNFUG00015024287) Nfu_g_1_000857 (ENSNFUG00015024285) ENSNFUG00015024284 ENSNFUG00015024281 HID1 (ENSNFUG00015024250) ENSNFUG00015024245 ENSNFUG00015024244 USH1G (ENSNFUG00015024243) ENSNFUG00015024235 OLA.23977 (ENSNFUG00015024232) PSD (ENSNFUG00015024077) CHUK (ENSNFUG00015024034) cdh2 (ENSNFUG00015023117) slc5a9 (ENSNFUG00015022772) #22 ENSNFUG00015022729 TRAPPC8 (ENSNFUG00015022483) pacrg (ENSNFUG00015022457) CTNS (ENSNFUG00015022453) zgc:171480 (ENSNFUG00015022451) NDUFA11 (ENSNFUG00015022450) COMMD2 (ENSNFUG00015022447) LMNB2 (ENSNFUG00015022297) RPL36 (ENSNFUG00015022284) pde6d (ENSNFUG00015022281) LRRC40 (ENSNFUG00015022014) ENSNFUG00015021970 ENSNFUG00015021961 DDX10 (ENSNFUG00015021959) HYI (ENSNFUG00015021903) Cyprinodontoidei ANCESTRAL SPECIES 80 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000012434 ENSGT00940000165232 ENSGT00390000005338 ENSGT00940000157546 #22 ENSGT00390000000568 Poeciliinae ANCESTRAL SPECIES 51 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000012434 ENSGT00940000165232 ENSGT00390000005338 ENSGT00390000000568.k ENSGT00940000157546 #22 ENSGT01030000234624.b.b.c.a.a ENSGT01030000234624.b.b.c.a.b.d ENSGT00390000003161 ENSGT00390000015908 ENSGT00940000156897 ENSGT00940000154930.eb ENSGT00940000155438.b ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b.c Poecilia ANCESTRAL SPECIES 77 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000012434 ENSGT00940000165232 ENSGT00390000005338 ENSGT00390000000568.k ENSGT00940000157546 #22 ENSGT01030000234624.b.b.c.a.a ENSGT01030000234624.b.b.c.a.b.d ENSGT00390000003161 ENSGT00390000015908 ENSGT00940000156897 ENSGT00940000154930.eb ENSGT00940000155438.b ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b.d ENSGT00940000175817 ENSGT00940000176289 Guppy MODERN SPECIES 456 ENSPREG00000020731 LONP1 (ENSPREG00000020681) LRRC24 (ENSPREG00000020634) sass6 (ENSPREG00000020575) ENSPREG00000020516 lrrc40 (ENSPREG00000020455) phb2b (ENSPREG00000020408) pde6d (ENSPREG00000020373) lmnb2 (ENSPREG00000020350) commd2 (ENSPREG00000020338) ndufa11 (ENSPREG00000020330) zgc:171480 (ENSPREG00000020328) ctns (ENSPREG00000020302) TRAPPC8 (ENSPREG00000020214) ENSPREG00000020171 slc5a9 (ENSPREG00000020124) #22 ENSPREG00000020075 ENSPREG00000020055 ARHGAP39 (ENSPREG00000020019) ENSPREG00000019993 rad54l (ENSPREG00000019955) ENSPREG00000019898 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 Platyfish MODERN SPECIES 23 LONP1 (ENSXMAG00000007990) LRRC24 (ENSXMAG00000025938) sass6 (ENSXMAG00000007984) ENSXMAG00000003630 ENSXMAG00000021070 lrrc40 (ENSXMAG00000007982) phb2b (ENSXMAG00000007977) pde6d (ENSXMAG00000021697) rpl36 (ENSXMAG00000007975) lmnb2 (ENSXMAG00000007953) commd2 (ENSXMAG00000007946) ndufa11 (ENSXMAG00000007938) zgc:171480 (ENSXMAG00000007937) ctns (ENSXMAG00000012245) TRAPPC8 (ENSXMAG00000018503) slc5a9 (ENSXMAG00000011126) #22 ENSXMAG00000011118 ENSXMAG00000011111 ENSXMAG00000021953 ARHGAP39 (ENSXMAG00000011225) ENSXMAG00000021814 rad54l (ENSXMAG00000006083) ENSXMAG00000016013 EPS15L1 (ENSXMAG00000021226) DDX10 (ENSXMAG00000016515) ENSXMAG00000012631 SZT2 (ENSXMAG00000028752) ENSXMAG00000029261 ENSXMAG00000026966 aspm (ENSXMAG00000000723) depdc1a (ENSXMAG00000000720) NAME_4 ANCESTRAL SPECIES 589 ENSGT00940000157546 #22 ENSGT00390000000568 Sheepshead minnow MODERN SPECIES 979 slc5a9 (ENSCVAG00000016097) #22 ENSCVAG00000015990 ARPP19 (ENSCVAG00000015957) ENSCVAG00000015953 ENSCVAG00000015925 GNB5 (ENSCVAG00000015899) bcl2l10 (ENSCVAG00000015872) trpm7 (ENSCVAG00000015859) ENSCVAG00000015783 ENSCVAG00000015753 Oryzias ANCESTRAL SPECIES 30 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a ENSGT00530000063690.a.b.a.b ENSGT00940000156935 ENSGT00390000014817 ENSGT00390000008110 ENSGT00390000013532 ENSGT00500000044869.a.b ENSGT00940000165304 ENSGT00730000111147.d ENSGT00940000157546 #22 ENSGT00390000000568 ENSGT01030000234624.b.b.c.a.a.m ENSGT00390000003821 ENSGT00390000013329 ENSGT00390000000289 ENSGT00940000157639 ENSGT00940000155528.t.d.a ENSGT00940000155981.h ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000156299 ENSGT00510000049027.c ENSGT01030000234551.i.e.b ENSGT00390000008152.B.a ENSGT00390000007227.b Oryzias_b ANCESTRAL SPECIES 35 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a ENSGT00530000063690.a.b.a.b ENSGT00940000156935 ENSGT00390000014817 ENSGT00390000008110 ENSGT00390000013532 ENSGT00500000044869.a.b ENSGT00940000165304 ENSGT00730000111147.d ENSGT00940000157546 #22 ENSGT00390000000568 ENSGT01030000234624.b.b.c.a.a.m ENSGT00390000003821 ENSGT00390000000289 ENSGT00390000013329 ENSGT00940000157639 ENSGT00940000155528.t.d.a ENSGT00940000155981.h ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000156299 ENSGT00510000049027.c ENSGT01030000234551.i.e.b ENSGT00390000008152.B.a ENSGT00390000007227.b Javanese ricefish MODERN SPECIES 18 PALLD (ENSOJAG00000012805) anapc4 (ENSOJAG00000013498) ENSOJAG00000000071 slain2 (ENSOJAG00000000153) SLC10A4 (ENSOJAG00000000178) zar1 (ENSOJAG00000000186) ociad2 (ENSOJAG00000000433) dcun1d4 (ENSOJAG00000000446) ENSOJAG00000000463 sgcb (ENSOJAG00000000472) ENSOJAG00000000479 spata18 (ENSOJAG00000000487) RSPH6A (ENSOJAG00000000497) dohh (ENSOJAG00000000505) cherp (ENSOJAG00000000538) slc5a9 (ENSOJAG00000000943) #22 ENSOJAG00000001937 TRAPPC8 (ENSOJAG00000002056) ENSOJAG00000002188 ENSOJAG00000002195 wdr18 (ENSOJAG00000002300) TMEM259 (ENSOJAG00000002320) stx6 (ENSOJAG00000002353) ELAVL1 (ENSOJAG00000002409) cdh2 (ENSOJAG00000002752) ENSOJAG00000004321 ENSOJAG00000004358 ect2 (ENSOJAG00000004709) ENSOJAG00000006139 rfc4 (ENSOJAG00000006627) midn (ENSOJAG00000007032) Indian medaka MODERN SPECIES 34 ENSOMEG00000016376 ENSOMEG00000016390 slain2 (ENSOMEG00000016407) SLC10A4 (ENSOMEG00000016428) zar1 (ENSOMEG00000016476) fryl (ENSOMEG00000016516) ENSOMEG00000016555 ociad2 (ENSOMEG00000016589) dcun1d4 (ENSOMEG00000016634) ENSOMEG00000016648 sgcb (ENSOMEG00000016672) spata18 (ENSOMEG00000016688) RSPH6A (ENSOMEG00000016720) dohh (ENSOMEG00000016754) cherp (ENSOMEG00000016947) slc5a9 (ENSOMEG00000017016) #22 ENSOMEG00000017106 TRAPPC8 (ENSOMEG00000017264) ENSOMEG00000017333 med16 (ENSOMEG00000017424) wdr18 (ENSOMEG00000017497) Oryzias_a ANCESTRAL SPECIES 87 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a ENSGT00530000063690.a.b.a.b ENSGT00940000156935 ENSGT00390000014817 ENSGT00390000008110 ENSGT00390000013532 ENSGT00500000044869.a.b ENSGT00940000165304 ENSGT00730000111147.d ENSGT00940000157546 #22 ENSGT00390000000568 ENSGT01030000234624.b.b.c.a.a.m Japanese Medaka HdrR MODERN SPECIES 18 cbr4 (ENSORLG00000000359) anapc4 (ENSORLG00000000318) slain2 (ENSORLG00000000260) SLC10A4 (ENSORLG00000000255) zar1 (ENSORLG00000000251) fryl (ENSORLG00000000234) ociad2 (ENSORLG00000000187) dcun1d4 (ENSORLG00000000179) ENSORLG00000028975 sgcb (ENSORLG00000000171) ENSORLG00000024361 spata18 (ENSORLG00000000158) RSPH6A (ENSORLG00000029539) dohh (ENSORLG00000000152) cherp (ENSORLG00000000138) slc5a9 (ENSORLG00000000128) #22 ENSORLG00000023122 TRAPPC8 (ENSORLG00000000118) ENSORLG00000029104 ENSORLG00000000110 ENSORLG00000025503 MED16 (ENSORLG00000000109) TMEM259 (ENSORLG00000000105) wdr18 (ENSORLG00000000101) stx6 (ENSORLG00000000093) ENSORLG00000000087 ENSORLG00000000073 rfc4 (ENSORLG00000000053) ENSORLG00000000049 ect2 (ENSORLG00000000041) ENSORLG00000025361 Ovalentaria_B ANCESTRAL SPECIES 45 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000158019 ENSGT00940000153229.A.a.b ENSGT01030000234624.b.b.c.a.a ENSGT01030000234624.b.b.c.a.b.c.a Pomacentridae ANCESTRAL SPECIES 146 ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT01030000234624.b.b.c.a.b.c.a ENSGT01030000234624.b.b.c.a.a ENSGT00940000153229.A.a.b ENSGT00940000158019 ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00950000182946.lb.b.h ENSGT00530000063632.A ENSGT00940000158851 ENSGT00940000156259.a.a Pomacentridae_A ANCESTRAL SPECIES 206 ENSGT00950000182916.b ENSGT00940000164735.H.a.c ENSGT00940000171226 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Amphiprion ANCESTRAL SPECIES 246 ENSGT00950000182916.b ENSGT00940000171226.g ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT01030000234624.b.b.c.a.b.c.a Clown anemonefish MODERN SPECIES 2148 TRAPPC8 (ENSAOCG00000016309) ctns (ENSAOCG00000016178) zgc:171480 (ENSAOCG00000016155) ndufa11 (ENSAOCG00000016147) slc5a9 (ENSAOCG00000016126) #22 ENSAOCG00000016105 Orange clownfish MODERN SPECIES 11 ENSAPEG00000021822 ENSAPEG00000021887 ENSAPEG00000021991 lrrc40 (ENSAPEG00000022030) ENSAPEG00000022042 phb2b (ENSAPEG00000022060) pde6d (ENSAPEG00000022089) rpl36 (ENSAPEG00000022120) ENSAPEG00000022136 lmnb2 (ENSAPEG00000022153) commd2 (ENSAPEG00000022198) TRAPPC8 (ENSAPEG00000022218) ctns (ENSAPEG00000022299) zgc:171480 (ENSAPEG00000022327) ndufa11 (ENSAPEG00000022333) slc5a9 (ENSAPEG00000022360) #22 ENSAPEG00000022515 ENSAPEG00000022550 vtg3 (ENSAPEG00000022610) TTC39A (ENSAPEG00000022705) rnf11b (ENSAPEG00000022776) faf1 (ENSAPEG00000022738) ENSAPEG00000022784 dmrta2 (ENSAPEG00000022824) elavl4 (ENSAPEG00000022826) AGBL4 (ENSAPEG00000022947) ##24 bend5 (ENSAPEG00000022984) #25 spata6 (ENSAPEG00000023000) ##23 dnttip2 (ENSAPEG00000023016) gclm (ENSAPEG00000023025) ccl25b (ENSAPEG00000023079) Spiny chromis MODERN SPECIES 2376 slc5a9 (ENSAPOG00000007590) #22 ENSAPOG00000007526 ENSAPOG00000007515 ENSAPOG00000007496 Bicolor damselfish MODERN SPECIES 484 phb2b (ENSSPAG00000011356) pde6d (ENSSPAG00000011386) rpl36 (ENSSPAG00000011406) lmnb2 (ENSSPAG00000011420) commd2 (ENSSPAG00000011461) TRAPPC8 (ENSSPAG00000011484) ctns (ENSSPAG00000011579) zgc:171480 (ENSSPAG00000011598) ndufa11 (ENSSPAG00000011610) slc5a9 (ENSSPAG00000011624) #22 ENSSPAG00000011666 ENSSPAG00000011755 ENSSPAG00000011768 ttr (ENSSPAG00000011796) b4galt6 (ENSSPAG00000011807) orc1 (ENSSPAG00000011845) rtca (ENSSPAG00000011938) ENSSPAG00000011968 pomgnt1 (ENSSPAG00000011983) TSPAN1 (ENSSPAG00000012072) ENSSPAG00000012089 Cichlidae ANCESTRAL SPECIES 64 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000156897 ENSGT00390000003161 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 Pseudocrenilabrinae ANCESTRAL SPECIES 23 ENSGT00390000013208 ENSGT00940000160974.a ENSGT00940000165748.a ENSGT00940000159926 ENSGT00530000063347.B ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.d ENSGT00940000160040.B.a.b ENSGT01030000234624.b.b.c.a.b.d.a.a ENSGT01030000234624.b.b.c.a.b.d.a.b ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000156897 ENSGT00390000003161 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00390000013208 ENSGT00940000160974.a ENSGT00940000165748.a ENSGT00940000159926 ENSGT00530000063347.B ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.d ENSGT00940000160040.B.a.b ENSGT01030000234624.b.b.c.a.b.d.a.a ENSGT01030000234624.b.b.c.a.b.d.a.b ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000156897 ENSGT00390000003161 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 Haplochromini ANCESTRAL SPECIES 9 ENSGT00390000013208 ENSGT00940000160974.a ENSGT00940000165748.a ENSGT00940000159926 ENSGT00530000063347.B ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.d ENSGT00940000160040.B.a.b ENSGT01030000234624.b.b.c.a.b.d.a.a ENSGT01030000234624.b.b.c.a.b.d.a.b ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000156897 ENSGT00390000003161 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 Burton s mouthbrooder MODERN SPECIES 516 arf5 (ENSHBUG00000008546) lamtor4 (ENSHBUG00000008483) atp6v1f (ENSHBUG00000000211) ENSHBUG00000008424 ENSHBUG00000008414 irf5 (ENSHBUG00000008367) tnpo3 (ENSHBUG00000008351) ENSHBUG00000008272 ENSHBUG00000008261 ENSHBUG00000008243 commd2 (ENSHBUG00000008186) TRAPPC8 (ENSHBUG00000008127) ctns (ENSHBUG00000007911) zgc:171480 (ENSHBUG00000007895) ENSHBUG00000007887 slc5a9 (ENSHBUG00000000957) #22 rad54l (ENSHBUG00000007793) ARHGAP39 (ENSHBUG00000007674) ENSHBUG00000007620 rad23ab (ENSHBUG00000007604) EPS15L1 (ENSHBUG00000007579) klf2a (ENSHBUG00000007426) cherp (ENSHBUG00000007405) dohh (ENSHBUG00000007286) ENSHBUG00000007253 ENSHBUG00000007235 LONP1 (ENSHBUG00000007228) LRRC24 (ENSHBUG00000007153) ENSHBUG00000007137 sass6 (ENSHBUG00000007142) ENSHBUG00000007123 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00390000013208 ENSGT00940000160974.a ENSGT00940000165748.a ENSGT00940000159926 ENSGT00530000063347.B ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.d ENSGT00940000160040.B.a.b ENSGT01030000234624.b.b.c.a.b.d.a.a ENSGT01030000234624.b.b.c.a.b.d.a.b ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000156897 ENSGT00390000003161 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 P. nyererei MODERN SPECIES 352 atp6v1f (ENSPNYG00000001709) ENSPNYG00000001719 ENSPNYG00000001798 irf5 (ENSPNYG00000001892) tnpo3 (ENSPNYG00000002349) opn1sw1 (ENSPNYG00000002459) calua (ENSPNYG00000002495) ENSPNYG00000002536 ENSPNYG00000002574 ENSPNYG00000002603 commd2 (ENSPNYG00000002645) TRAPPC8 (ENSPNYG00000002675) ctns (ENSPNYG00000002798) ENSPNYG00000002807 ndufa11 (ENSPNYG00000002828) slc5a9 (ENSPNYG00000002899) #22 rad54l (ENSPNYG00000002942) ARHGAP39 (ENSPNYG00000003004) ENSPNYG00000003111 rad23ab (ENSPNYG00000003716) EPS15L1 (ENSPNYG00000003764) klf2a (ENSPNYG00000003903) cherp (ENSPNYG00000003942) dohh (ENSPNYG00000004038) ENSPNYG00000004067 LONP1 (ENSPNYG00000004109) LRRC24 (ENSPNYG00000004201) ENSPNYG00000004235 sass6 (ENSPNYG00000004283) ENSPNYG00000004351 ENSPNYG00000004368 Haplochromini_B ANCESTRAL SPECIES 32 ENSGT00940000157546 #22 ENSGT00940000156897 ENSGT00390000003161 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 Eastern happy MODERN SPECIES 8 ENSACLG00000018185 nav3 (ENSACLG00000018218) ENSACLG00000018320 ENSACLG00000018326 ENSACLG00000018350 si:ch211-214j24.10 (ENSACLG00000018365) osgep (ENSACLG00000018378) apex1 (ENSACLG00000018441) ENSACLG00000018457 SELENOO (ENSACLG00000018547) ENSACLG00000018564 ENSACLG00000018573 ENSACLG00000018586 NXPE3 (ENSACLG00000018614) ENSACLG00000018652 slc5a9 (ENSACLG00000018671) #22 rad54l (ENSACLG00000018711) ARHGAP39 (ENSACLG00000018822) ENSACLG00000018909 ENSACLG00000019728 EPS15L1 (ENSACLG00000019765) klf2a (ENSACLG00000020002) cherp (ENSACLG00000020053) dohh (ENSACLG00000020170) RSPH6A (ENSACLG00000020217) ENSACLG00000020226 LONP1 (ENSACLG00000020238) LRRC24 (ENSACLG00000020340) ENSACLG00000020399 sass6 (ENSACLG00000020360) ENSACLG00000020413 Zebra mbuna MODERN SPECIES 1099 ENSMZEG00005018224 ENSMZEG00005018221 ENSMZEG00005018218 ENSMZEG00005018217 ENSMZEG00005018214 cpm (ENSMZEG00005018212) ENSMZEG00005018209 ovch1 (ENSMZEG00005018205) ENSMZEG00005018201 stab2 (ENSMZEG00005018192) wnt16 (ENSMZEG00005018190) ENSMZEG00005018188 ENSMZEG00005018101 KLHL10 (ENSMZEG00005018097) ENSMZEG00005018090 slc5a9 (ENSMZEG00005018087) #22 rad54l (ENSMZEG00005018081) ARHGAP39 (ENSMZEG00005018073) ENSMZEG00005018068 rad23ab (ENSMZEG00005018063) EPS15L1 (ENSMZEG00005018043) klf2a (ENSMZEG00005018029) cherp (ENSMZEG00005018014) dohh (ENSMZEG00005018009) RSPH6A (ENSMZEG00005018007) LONP1 (ENSMZEG00005018001) LRRC24 (ENSMZEG00005017996) ENSMZEG00005017994 sass6 (ENSMZEG00005017990) ENSMZEG00005017984 lrrc40 (ENSMZEG00005017975) Lyretail cichlid MODERN SPECIES 291 atp6v1f (ENSNBRG00000018887) ENSNBRG00000018904 ENSNBRG00000018931 irf5 (ENSNBRG00000018961) tnpo3 (ENSNBRG00000019001) opn1sw1 (ENSNBRG00000019094) calua (ENSNBRG00000019126) ENSNBRG00000019147 ENSNBRG00000019167 ENSNBRG00000019186 commd2 (ENSNBRG00000019251) TRAPPC8 (ENSNBRG00000019291) ctns (ENSNBRG00000019430) zgc:171480 (ENSNBRG00000019447) ndufa11 (ENSNBRG00000019451) slc5a9 (ENSNBRG00000019467) #22 rad54l (ENSNBRG00000019493) ARHGAP39 (ENSNBRG00000019535) ENSNBRG00000019757 rad23ab (ENSNBRG00000020303) EPS15L1 (ENSNBRG00000020320) klf2a (ENSNBRG00000020367) ENSNBRG00000020370 Nile tilapia MODERN SPECIES 8 lamtor4 (ENSONIG00000038960) atp6v1f (ENSONIG00000028240) ENSONIG00000007597 irf5 (ENSONIG00000007600) tnpo3 (ENSONIG00000007604) opn1sw1 (ENSONIG00000007620) calua (ENSONIG00000007615) ENSONIG00000007621 ENSONIG00000032590 ENSONIG00000003673 commd2 (ENSONIG00000041512) TRAPPC8 (ENSONIG00000007639) ctns (ENSONIG00000007643) zgc:171480 (ENSONIG00000042367) ndufa11 (ENSONIG00000036286) slc5a9 (ENSONIG00000007647) #22 rad54l (ENSONIG00000007659) ARHGAP39 (ENSONIG00000007661) ENSONIG00000007664 ENSONIG00000035183 EPS15L1 (ENSONIG00000007674) klf2a (ENSONIG00000007684) cherp (ENSONIG00000007686) dohh (ENSONIG00000007695) RSPH6A (ENSONIG00000007698) ENSONIG00000039347 LONP1 (ENSONIG00000007700) LRRC24 (ENSONIG00000007706) ENSONIG00000007712 sass6 (ENSONIG00000007713) ENSONIG00000032489 Midas cichlid MODERN SPECIES 1233 commd2 (ENSACIG00000001531) TRAPPC8 (ENSACIG00000001554) ctns (ENSACIG00000001625) zgc:171480 (ENSACIG00000001646) ndufa11 (ENSACIG00000001657) slc5a9 (ENSACIG00000001720) #22 ENSACIG00000001748 ENSACIG00000001790 b4galt6 (ENSACIG00000001825) ENSACIG00000001854 orc1 (ENSACIG00000001886) rad54l (ENSACIG00000001939) ARHGAP39 (ENSACIG00000001996) ENSACIG00000002021 rad23ab (ENSACIG00000002029) EPS15L1 (ENSACIG00000002115) ENSACIG00000002155 klf2a (ENSACIG00000002161) Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Eupercaria ANCESTRAL SPECIES 35 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000157546 #22 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000005115 ENSTNIG00000005116 fxr2 (ENSTNIG00000005118) haus4 (ENSTNIG00000005119) dock11 (ENSTNIG00000005120) ENSTNIG00000000661 ENSTNIG00000005122 e2f7 (ENSTNIG00000005126) csrp2 (ENSTNIG00000005127) zdhhc17 (ENSTNIG00000005128) MORN4 (ENSTNIG00000005131) hoga1 (ENSTNIG00000005132) ENSTNIG00000005143 ENSTNIG00000001619 slc5a9 (ENSTNIG00000005144) #22 slc5a9 (ENSTNIG00000005145) #22 ENSTNIG00000005146 ENSTNIG00000005147 ENSTNIG00000005974 ENSTNIG00000005149 palm1b (ENSTNIG00000005153) SLC1A3 (ENSTNIG00000005166) ENSTNIG00000005167 ENSTNIG00000005168 ENSTNIG00000005169 e2f4 (ENSTNIG00000005170) zgc:154077 (ENSTNIG00000005171) ENSTNIG00000005185 ENSTNIG00000005186 ENSTNIG00000005188 ENSTNIG00000005189 Tetraodon MODERN SPECIES 26 mecp2 (ENSTNIG00000005114) ENSTNIG00000005115 ENSTNIG00000005116 fxr2 (ENSTNIG00000005118) haus4 (ENSTNIG00000005119) dock11 (ENSTNIG00000005120) ENSTNIG00000000661 ENSTNIG00000005122 e2f7 (ENSTNIG00000005126) csrp2 (ENSTNIG00000005127) zdhhc17 (ENSTNIG00000005128) MORN4 (ENSTNIG00000005131) hoga1 (ENSTNIG00000005132) ENSTNIG00000005143 ENSTNIG00000001619 slc5a9 (ENSTNIG00000005144) #22 slc5a9 (ENSTNIG00000005145) #22 ENSTNIG00000005146 ENSTNIG00000005147 ENSTNIG00000005974 ENSTNIG00000005149 palm1b (ENSTNIG00000005153) SLC1A3 (ENSTNIG00000005166) ENSTNIG00000005167 ENSTNIG00000005168 ENSTNIG00000005169 e2f4 (ENSTNIG00000005170) zgc:154077 (ENSTNIG00000005171) ENSTNIG00000005185 ENSTNIG00000005186 ENSTNIG00000005188 Fugu MODERN SPECIES 12 ENSTRUG00000024465 RSPH6A (ENSTRUG00000024219) dohh (ENSTRUG00000007341) cherp (ENSTRUG00000007429) ENSTRUG00000029023 EPS15L1 (ENSTRUG00000007862) ARHGAP39 (ENSTRUG00000008303) ENSTRUG00000025668 rad54l (ENSTRUG00000008410) ENSTRUG00000008660 ptprfa (ENSTRUG00000008928) ift57 (ENSTRUG00000010380) hyi (ENSTRUG00000010400) ENSTRUG00000010881 ENSTRUG00000026671 slc5a9 (ENSTRUG00000010971) #22 ENSTRUG00000033114 ENSTRUG00000032498 ENSTRUG00000011095 ENSTRUG00000032873 ENSTRUG00000011239 ENSTRUG00000025418 ENSTRUG00000032257 ttc39c (ENSTRUG00000011251) zgc:103559 (ENSTRUG00000011363) dtymk (ENSTRUG00000029570) atg4b (ENSTRUG00000029746) dtymk (ENSTRUG00000011656) atg4b (ENSTRUG00000011726) boka (ENSTRUG00000011955) FARP2 (ENSTRUG00000012014) Eupecaria_A ANCESTRAL SPECIES 33 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Ballan wrasse MODERN SPECIES 43 ENSLBEG00000011662 ENSLBEG00000011624 DDX10 (ENSLBEG00000011602) ENSLBEG00000011587 ENSLBEG00000011562 SZT2 (ENSLBEG00000011405) hyi (ENSLBEG00000011314) ptprfa (ENSLBEG00000011071) ENSLBEG00000010995 slc5a9 (ENSLBEG00000010966) #22 ctns (ENSLBEG00000010945) ndufa11 (ENSLBEG00000010937) zgc:171480 (ENSLBEG00000010915) ENSLBEG00000010861 ENSLBEG00000010819 ankrd29 (ENSLBEG00000010797) ENSLBEG00000010709 plekhb2 (ENSLBEG00000010657) ing5a (ENSLBEG00000010608) cep19 (ENSLBEG00000010586) pigx (ENSLBEG00000010570) pak2b (ENSLBEG00000010493) aqp12 (ENSLBEG00000010455) rpp21 (ENSLBEG00000010436) slc35d1a (ENSLBEG00000010358) Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Perciformes ANCESTRAL SPECIES 39 ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000158019 ENSGT01050000245154 ENSGT01030000234624.b.b.c.a.a ENSGT01030000234624.b.b.c.a.b.d ENSGT00940000155981.h ENSGT00940000156037.a.f.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000157285.f Cottioidei ANCESTRAL SPECIES 61 ENSGT00730000111147 ENSGT01030000234598.a.b ENSGT00940000155789 ENSGT00940000156299 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00550000074917 ENSGT01030000234624.b.b.c.a.b.d ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00390000012434 ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00940000155981.h ENSGT00940000156037.a.f.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb Lumpfish MODERN SPECIES 19 nlgn1 (ENSCLMG00005019089) ENSCLMG00005019099 ect2 (ENSCLMG00005019102) MCF2L2 (ENSCLMG00005019706) b3gnt5a (ENSCLMG00005019725) rfc4 (ENSCLMG00005019729) ENSCLMG00005019731 ENSCLMG00005019732 rpl36 (ENSCLMG00005019733) lmnb2 (ENSCLMG00005019742) commd2 (ENSCLMG00005020022) TRAPPC8 (ENSCLMG00005020031) ctns (ENSCLMG00005020082) ndufa11 (ENSCLMG00005020083) zgc:171480 (ENSCLMG00005020087) slc5a9 (ENSCLMG00005020095) #22 b4galt6 (ENSCLMG00005020243) ENSCLMG00005020258 cdh2 (ENSCLMG00005020259) ENSCLMG00005020293 ENSCLMG00005020294 ENSCLMG00005020295 ENSCLMG00005020296 ENSCLMG00005020297 ENSCLMG00005020298 ENSCLMG00005000206 hyi (ENSCLMG00005000212) ptprfa (ENSCLMG00005000384) ENSCLMG00005009510 ENSCLMG00005010982 rad54l (ENSCLMG00005010988) Stickleback MODERN SPECIES 460 cherp (ENSGACG00000002053) nlgn1 (ENSGACG00000002058) ENSGACG00000002062 ect2 (ENSGACG00000002063) MCF2L2 (ENSGACG00000002072) b3gnt5a (ENSGACG00000002077) rfc4 (ENSGACG00000002080) ENSGACG00000002084 rpl36 (ENSGACG00000002088) lmnb2 (ENSGACG00000002099) commd2 (ENSGACG00000002117) TRAPPC8 (ENSGACG00000002121) ctns (ENSGACG00000002126) ndufa11 (ENSGACG00000002132) zgc:171480 (ENSGACG00000002136) slc5a9 (ENSGACG00000002137) #22 ENSGACG00000002148 b4galt6 (ENSGACG00000002150) ENSGACG00000002160 ENSGACG00000002165 ENSGACG00000002169 NXPE3 (ENSGACG00000002171) Perciformes_a ANCESTRAL SPECIES 47 ENSGT00940000165304 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00940000158019 ENSGT01050000245154 ENSGT01030000234624.b.b.c.a.a ENSGT01030000234624.b.b.c.a.b.d ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000157285.f ENSGT00950000182993.B.a.d Pike perch MODERN SPECIES 26 LRRC24 (ENSSLUG00000022384) sass6 (ENSSLUG00000022371) ENSSLUG00000022343 ENSSLUG00000022257 ENSSLUG00000022242 lrrc40 (ENSSLUG00000022212) rpl36 (ENSSLUG00000022191) pde6d (ENSSLUG00000022168) ENSSLUG00000022160 lmnb2 (ENSSLUG00000021344) commd2 (ENSSLUG00000021290) TRAPPC8 (ENSSLUG00000021244) ctns (ENSSLUG00000021220) zgc:171480 (ENSSLUG00000021217) ndufa11 (ENSSLUG00000021213) slc5a9 (ENSSLUG00000021204) #22 b4galt6 (ENSSLUG00000021003) ENSSLUG00000020971 ENSSLUG00000020949 ENSSLUG00000020936 ENSSLUG00000020930 cdh2 (ENSSLUG00000019144) ENSSLUG00000019045 ENSSLUG00000019036 ENSSLUG00000019035 SZT2 (ENSSLUG00000018929) hyi (ENSSLUG00000018892) ptprfa (ENSSLUG00000001867) ENSSLUG00000000999 ENSSLUG00000000985 st3gal3a (ENSSLUG00000000977) Channel bull blenny MODERN SPECIES 18 LONP1 (ENSCGOG00000018110) RSPH6A (ENSCGOG00000018090) dohh (ENSCGOG00000018088) LRRC24 (ENSCGOG00000018087) ENSCGOG00000018085 ENSCGOG00000018038 ENSCGOG00000018032 lrrc40 (ENSCGOG00000018008) rpl36 (ENSCGOG00000018004) lmnb2 (ENSCGOG00000017185) commd2 (ENSCGOG00000017153) TRAPPC8 (ENSCGOG00000015459) ctns (ENSCGOG00000015418) zgc:171480 (ENSCGOG00000015416) ndufa11 (ENSCGOG00000015413) slc5a9 (ENSCGOG00000011737) #22 b4galt6 (ENSCGOG00000011204) ttr (ENSCGOG00000011190) ENSCGOG00000011182 ENSCGOG00000011181 cdh2 (ENSCGOG00000008039) ENSCGOG00000007955 ENSCGOG00000007948 aqp4 (ENSCGOG00000007648) ENSCGOG00000007624 TAF4B (ENSCGOG00000007623) ENSCGOG00000007621 SZT2 (ENSCGOG00000007602) hyi (ENSCGOG00000007598) ptprfa (ENSCGOG00000004545) ENSCGOG00000003562 Eupecaria_C DUPLICATION Eupecaria_C ANCESTRAL SPECIES ENSGT00940000157546.s #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000157546.s #22 Large yellow croaker MODERN SPECIES 111 ENSLCRG00005002462 MELTF (ENSLCRG00005002702) ENSLCRG00005002842 fkbp2 (ENSLCRG00005002844) ncbp2 (ENSLCRG00005002846) zgc:171480 (ENSLCRG00005002848) ENSLCRG00005002850 #22 Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00940000157546.t #22 ENSGT00390000012434 Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00940000157546.t #22 European seabass MODERN SPECIES 5 ENSDLAG00005032685 ENSDLAG00005010365 ENSDLAG00005006710 ENSDLAG00005004929 ENSDLAG00005031010 ENSDLAG00005004935 ENSDLAG00005011209 ENSDLAG00005019125 ENSDLAG00005026728 ENSDLAG00005033415 ENSDLAG00005028890 ENSDLAG00005019786 ENSDLAG00005029411 ENSDLAG00005019035 ENSDLAG00005032357 ENSDLAG00005021464 #22 ENSDLAG00005030478 ENSDLAG00005014957 ENSDLAG00005029406 ENSDLAG00005014936 ENSDLAG00005026886 ENSDLAG00005013672 ENSDLAG00005033842 ENSDLAG00005028525 ENSDLAG00005027743 ENSDLAG00005032992 ENSDLAG00005034710 ENSDLAG00005032257 ENSDLAG00005004352 ENSDLAG00005016363 ENSDLAG00005032890 Large yellow croaker MODERN SPECIES 486 fbxo3 (ENSLCRG00005009567) ENSLCRG00005009570 ENSLCRG00005009572 SH3YL1 (ENSLCRG00005009575) ENSLCRG00005009581 ENSLCRG00005009585 lipt1 (ENSLCRG00005009586) ENSLCRG00005009588 ENSLCRG00005009593 bco1l (ENSLCRG00005010437) ENSLCRG00005010522 dnaaf4 (ENSLCRG00005000811) ENSLCRG00005000825 ENSLCRG00005000839 ENSLCRG00005000872 slc5a9 (ENSLCRG00005000881) #22 pde6d (ENSLCRG00005000891) PRKX (ENSLCRG00005000930) ENSLCRG00005000933 nlgn4xa (ENSLCRG00005000938) pudp (ENSLCRG00005000945) pnpla4 (ENSLCRG00005000949) STS (ENSLCRG00005000957) anos1a (ENSLCRG00005000989) ENSLCRG00005001011 ENSLCRG00005001016 ENSLCRG00005001020 ENSLCRG00005001024 ENSLCRG00005001025 ENSLCRG00005001030 arhgap1 (ENSLCRG00005001032) Gilthead seabream MODERN SPECIES 2 EXOC6 (ENSSAUG00010023427) ENSSAUG00010023425 ST3GAL3 (ENSSAUG00010023421) ENSSAUG00010023420 ENSSAUG00010023418 ENSSAUG00010023417 TRAPPC8 (ENSSAUG00010023404) lmnb2 (ENSSAUG00010023215) commd2 (ENSSAUG00010023211) ENSSAUG00010023206 ctns (ENSSAUG00010023205) ENSSAUG00010023204 NDUFA11 (ENSSAUG00010023201) ENSSAUG00010023200 zgc:171480 (ENSSAUG00010023199) slc5a9 (ENSSAUG00010020023) #22 ENSSAUG00010019927 ENSSAUG00010019926 sass6 (ENSSAUG00010019923) pde6d (ENSSAUG00010019860) lrrc40 (ENSSAUG00010019857) ENSSAUG00010019424 ENSSAUG00010019414 ENSSAUG00010019410 ENSSAUG00010019409 ENSSAUG00010019407 SZT2 (ENSSAUG00010019387) hyi (ENSSAUG00010019382) ENSSAUG00010019381 ENSSAUG00010019380 ENSSAUG00010019379 Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 Anabantaria ANCESTRAL SPECIES ENSGT00940000157546 #22 Anabantoidei ANCESTRAL SPECIES 33 ENSGT00940000157546 #22 ENSGT01030000234624.b.b.c.a.a ENSGT00940000158019 ENSGT00390000012434 ENSGT00940000165232 ENSGT00390000005338 ENSGT00390000000568 ENSGT00390000008489 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00390000000263 ENSGT00950000183070.a.a.mb.b ENSGT00940000156968 ENSGT00940000175684 ENSGT00950000182916.b ENSGT00390000006932 Climbing perch MODERN SPECIES 17 ENSATEG00000005021 ENSATEG00000005205 #22 ENSATEG00000005455 ENSATEG00000005532 ENSATEG00000005595 ENSATEG00000028922 ENSATEG00000005631 ENSATEG00000005641 ENSATEG00000026462 ENSATEG00000005814 ENSATEG00000029491 ENSATEG00000005845 ENSATEG00000005884 ENSATEG00000005893 ENSATEG00000005899 ENSATEG00000005920 ENSATEG00000005948 Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000004626 slc5a9 (ENSBSLG00000004234) #22 ENSBSLG00000004165 ENSBSLG00000004161 crata (ENSBSLG00000004124) ENSBSLG00000004121 ENSBSLG00000004115 ENSBSLG00000004112 ENSBSLG00000004054 ENSBSLG00000004021 b3gnt5a (ENSBSLG00000004013) ENSBSLG00000004006 ENSBSLG00000003788 ect2 (ENSBSLG00000003210) ENSBSLG00000003202 ect2 (ENSBSLG00000002935) nlgn1 (ENSBSLG00000002625) Zig-zag eel MODERN SPECIES 18 ENSMAMG00000025391 ENSMAMG00000022311 ENSMAMG00000022308 ENSMAMG00000022305 ENSMAMG00000022303 ENSMAMG00000027860 ENSMAMG00000022297 ENSMAMG00000022289 ENSMAMG00000022285 ENSMAMG00000022283 DOHH (ENSMAMG00000025352) ENSMAMG00000022269 ENSMAMG00000022258 ENSMAMG00000022254 ENSMAMG00000022250 ENSMAMG00000022245 #22 ENSMAMG00000022242 ENSMAMG00000022223 ENSMAMG00000022209 ENSMAMG00000022202 ENSMAMG00000022197 ENSMAMG00000022193 ENSMAMG00000022195 rad54l (ENSMAMG00000022180) st3gal3a (ENSMAMG00000028614) ENSMAMG00000022165 ptprfa (ENSMAMG00000022139) ENSMAMG00000022161 ENSMAMG00000025331 ENSMAMG00000022135 hyi (ENSMAMG00000022129) Carangaria ANCESTRAL SPECIES 7 ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000175684 ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.a.b ENSGT00950000183039.B.b.c ENSGT00950000183111.b.a.b ENSGT00940000157769 ENSGT00940000178684 ENSGT00940000156539 ENSGT00390000002505 ENSGT00940000161304.a.a Carangaria_A ANCESTRAL SPECIES 3 ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00390000006932 ENSGT00950000182916.b ENSGT00940000156968 ENSGT00950000183070.a.a.mb.b ENSGT00390000000263 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000008489 ENSGT00390000000568 ENSGT00390000005338 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.a.b ENSGT00950000183039.B.b.c ENSGT00950000183111.b.a.b ENSGT00940000157769 ENSGT00940000156539 ENSGT00390000002505 ENSGT00940000161304.a.a ENSGT00940000156073.c.b Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 595 rpl36 (ENSLCAG00010008485) lmnb2 (ENSLCAG00010008480) commd2 (ENSLCAG00010008475) TRAPPC8 (ENSLCAG00010008355) ctns (ENSLCAG00010008324) zgc:171480 (ENSLCAG00010008317) ndufa11 (ENSLCAG00010008305) slc5a9 (ENSLCAG00010008287) #22 Barramundi perch MODERN SPECIES 749 slc5a9 (ENSLCAG00010015464) #22 Seriola ANCESTRAL SPECIES 21 ENSGT00940000164612.b ENSGT00940000155412.a.b ENSGT00550000075010 ENSGT00390000005897.i ENSGT01100000263497.E.b.q.b ENSGT00950000182964.a.a.g.a ENSGT00940000160138 ENSGT00940000163676 ENSGT00390000010047.g.a ENSGT00940000163762.a.b ENSGT00390000011838 ENSGT00940000163309 ENSGT00390000002659 ENSGT00940000165232 ENSGT00390000012434 ENSGT00940000157546 #22 ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.a.b ENSGT00950000183039.B.b.c ENSGT00950000183111.b.a.b ENSGT00940000157769 ENSGT00940000156539 ENSGT00390000002505 ENSGT00940000161304.a.a ENSGT00940000156073.c.b Yellowtail amberjack MODERN SPECIES 2958 scinla (ENSSLDG00000020067) zgc:109982 (ENSSLDG00000020018) dr1 (ENSSLDG00000019992) WLS (ENSSLDG00000019972) GNG12 (ENSSLDG00000019959) gadd45ab (ENSSLDG00000019947) ENSSLDG00000019902 ZNF648 (ENSSLDG00000019892) glulb (ENSSLDG00000019865) pbx1b (ENSSLDG00000019830) med8 (ENSSLDG00000019796) aldh9a1a.1 (ENSSLDG00000019759) tmco1 (ENSSLDG00000019642) zgc:171480 (ENSSLDG00000019598) ndufa11 (ENSSLDG00000019590) slc5a9 (ENSSLDG00000019441) #22 rfc4 (ENSSLDG00000019380) b3gnt5a (ENSSLDG00000019375) MCF2L2 (ENSSLDG00000019307) ect2 (ENSSLDG00000019212) Greater amberjack MODERN SPECIES 110 ENSSDUG00000022452 scinla (ENSSDUG00000022455) zgc:109982 (ENSSDUG00000022470) dr1 (ENSSDUG00000022478) WLS (ENSSDUG00000022481) GNG12 (ENSSDUG00000022488) gadd45ab (ENSSDUG00000022494) ENSSDUG00000022497 glulb (ENSSDUG00000022512) pbx1b (ENSSDUG00000022517) med8 (ENSSDUG00000022527) aldh9a1a.1 (ENSSDUG00000022536) tmco1 (ENSSDUG00000022551) zgc:171480 (ENSSDUG00000022556) ndufa11 (ENSSDUG00000022559) slc5a9 (ENSSDUG00000022566) #22 rfc4 (ENSSDUG00000022576) MCF2L2 (ENSSDUG00000022590) b3gnt5a (ENSSDUG00000022604) ect2 (ENSSDUG00000022620) SPATA16 (ENSSDUG00000022669) nlgn1 (ENSSDUG00000022680) NAALADL2 (ENSSDUG00000022683) ENSSDUG00000022696 ENSSDUG00000022711 ENSSDUG00000000079 mep1ba (ENSSDUG00000000096) MEP1B (ENSSDUG00000000179) uhmk1 (ENSSDUG00000000226) akr1a1b (ENSSDUG00000000280) ENSSDUG00000000323 Pleuronectoidei ANCESTRAL SPECIES 40 ENSGT00940000157546 #22 ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299 ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.a.b ENSGT00950000183039.B.b.c ENSGT00950000183111.b.a.b ENSGT00940000157769 ENSGT00940000178684 ENSGT00940000156539 ENSGT00390000002505 ENSGT00940000161304.a.a ENSGT00940000156073.c.b Tongue sole MODERN SPECIES 11 med16 (ENSCSEG00000000658) PLPPR3 (ENSCSEG00000000652) ENSCSEG00000000645 dbt (ENSCSEG00000000633) lrrc39 (ENSCSEG00000000618) trmt13 (ENSCSEG00000000591) ENSCSEG00000000588 palm1a (ENSCSEG00000000549) rtca (ENSCSEG00000000530) cdc14ab (ENSCSEG00000000520) vcam1b (ENSCSEG00000000513) slc30a7 (ENSCSEG00000000508) dph5 (ENSCSEG00000000501) s1pr1 (ENSCSEG00000000496) zgc:113223 (ENSCSEG00000000490) slc5a9 (ENSCSEG00000000483) #22 rfc4 (ENSCSEG00000000471) sgta (ENSCSEG00000000465) ENSCSEG00000000460 APC2 (ENSCSEG00000000443) gadd45ba (ENSCSEG00000000436) CARTPT (ENSCSEG00000000433) ENSCSEG00000000432 ENSCSEG00000000429 ENSCSEG00000000415 med8 (ENSCSEG00000000413) aldh9a1a.1 (ENSCSEG00000000405) wdr18 (ENSCSEG00000000391) kif2a (ENSCSEG00000000385) GFUS (ENSCSEG00000000378) serpinb1 (ENSCSEG00000000377) Turbot MODERN SPECIES 3 ENSSMAG00000034336 ptp4a2b (ENSSMAG00000027250) ENSSMAG00000022390 ENSSMAG00000025201 ENSSMAG00000034351 ENSSMAG00000036585 ENSSMAG00000029540 ENSSMAG00000023931 ENSSMAG00000029753 ENSSMAG00000004158 ENSSMAG00000004170 ENSSMAG00000004187 ENSSMAG00000004205 ENSSMAG00000004230 ENSSMAG00000004293 ENSSMAG00000004336 #22 ENSSMAG00000004476 ENSSMAG00000004533 ect2 (ENSSMAG00000004933) ENSSMAG00000035003 ENSSMAG00000004148 nlgn1 (ENSSMAG00000004105) NAALADL2 (ENSSMAG00000004025) ENSSMAG00000003967 ENSSMAG00000023002 ENSSMAG00000003915 ENSSMAG00000003891 ENSSMAG00000003868 ENSSMAG00000003829 ENSSMAG00000037404 slc1a7b (ENSSMAG00000003772) Pinecone sodierfish MODERN SPECIES 18 axdnd1 (ENSMMDG00005001658) ctns (ENSMMDG00005001669) ENSMMDG00005001675 ENSMMDG00005001680 ndufa11 (ENSMMDG00005001685) VMAC (ENSMMDG00005001688) LONP1 (ENSMMDG00005001776) rpl36 (ENSMMDG00005003091) lmnb2 (ENSMMDG00005003146) commd2 (ENSMMDG00005003216) wwtr1 (ENSMMDG00005003223) b4galt6 (ENSMMDG00005003244) ttr (ENSMMDG00005003273) ENSMMDG00005003375 zgc:171480 (ENSMMDG00005003378) slc5a9 (ENSMMDG00005003387) #22 pde6d (ENSMMDG00005003579) TRAPPC8 (ENSMMDG00005003617) ENSMMDG00005003791 LRRC24 (ENSMMDG00005003846) dohh (ENSMMDG00005003855) lrrc40 (ENSMMDG00005003868) phb2b (ENSMMDG00005003907) ENSMMDG00005003921 ENSMMDG00005003923 ENSMMDG00005003927 ENSMMDG00005003934 ENSMMDG00005003940 ENSMMDG00005003954 pfn2a (ENSMMDG00005003964) rnf13 (ENSMMDG00005003971) Cod MODERN SPECIES 3 ptprfa (ENSGMOG00000004387) ENSGMOG00000031362 hyi (ENSGMOG00000008681) ENSGMOG00000033968 ENSGMOG00000025378 ENSGMOG00000008604 ENSGMOG00000031823 ENSGMOG00000008600 ENSGMOG00000028785 ENSGMOG00000034974 ENSGMOG00000010884 ENSGMOG00000010881 lmnb2 (ENSGMOG00000010869) ENSGMOG00000010861 ENSGMOG00000019009 ENSGMOG00000019014 #22 ENSGMOG00000019082 ENSGMOG00000019091 ENSGMOG00000015255 ENSGMOG00000019002 ENSGMOG00000019097 plekhb2 (ENSGMOG00000019108) ing5a (ENSGMOG00000019113) cep19 (ENSGMOG00000019124) pigx (ENSGMOG00000019129) pak2b (ENSGMOG00000019155) ENSGMOG00000027024 ENSGMOG00000032886 ENSGMOG00000036892 ENSGMOG00000029872 ENSGMOG00000019178 Protacanthopterygii ANCESTRAL SPECIES 104 ENSGT00390000013701 ENSGT00950000183189.a.b.a.l ENSGT00950000183189.a.b.a.k ENSGT00940000154384 ENSGT00940000160614 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156968.p ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 #22 ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a ##24 ENSGT00390000001724.l #25 ENSGT00940000155042.a.b ##24 ENSGT00940000157399 ENSGT00940000161649 ENSGT00940000154831 ENSGT00940000160194 ENSGT00730000110988.wb.a ENSGT00950000182917.a.b.a ENSGT00940000155751.a ENSGT00950000182915.b.b.a.a ENSGT00950000182888.a.a.b Salmoninae ANCESTRAL SPECIES 115 ENSGT00940000160141.e.b.a ENSGT00390000013701.t ENSGT00950000183189.a.b.a.k ENSGT00940000154384 ENSGT00940000160614.i ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000165232.h ENSGT00940000157546 #22 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ##23 ENSGT00940000155042.a.a.f ##24 ENSGT00390000001724.l.b.b #25 ENSGT00940000157399.a ENSGT00940000161649.f ENSGT00940000154831.h.a ENSGT00940000160194.l ENSGT00730000110988.wb.a.c ENSGT00950000182917.a.b.a.j ENSGT00940000155751.a.c ENSGT00950000182915.b.b.a.a.cb.b ENSGT00950000182888.a.a.b.f ENSGT00940000154690.d.a Salmoninae_a ANCESTRAL SPECIES 22 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00390000013701.t ENSGT00950000183189.a.b.a.k ENSGT00940000154384 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000165232.h ENSGT00940000157546 #22 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ##23 ENSGT00390000001724.l.a.b #25 ENSGT00940000155042.a.a.f ##24 ENSGT00390000001724.l.b.b #25 ENSGT00940000157399.a ENSGT00940000161649.f ENSGT00940000154831.h.a ENSGT00940000160194.l ENSGT00730000110988.wb.a.c ENSGT00950000182917.a.b.a.j ENSGT00940000155751.a.c ENSGT00950000182915.b.b.a.a.cb.b ENSGT00950000182888.a.a.b.f Salmo ANCESTRAL SPECIES 14 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00390000013701.t ENSGT00950000183189.a.b.a.k ENSGT00940000154384 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000165232.h ENSGT00940000157546 #22 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ##23 ENSGT00390000001724.l.b.b #25 ENSGT00940000157399.a ENSGT00940000161649.f ENSGT00940000154831.h.a ENSGT00940000160194.l ENSGT00730000110988.wb.a.c ENSGT00950000182917.a.b.a.j ENSGT00940000155751.a.c ENSGT00950000182915.b.b.a.a.cb.b ENSGT00950000182888.a.a.b.f ENSGT00940000154690.d.a ENSGT00940000153838.b.e Atlantic salmon MODERN SPECIES 1 ENSSSAG00000114736 ENSSSAG00000051282 ENSSSAG00000051296 ENSSSAG00000105616 ENSSSAG00000051511 ENSSSAG00000120735 ENSSSAG00000082201 lrrc2 (ENSSSAG00000060461) LRRC7 (ENSSSAG00000060780) DEPDC1 (ENSSSAG00000061391) ENSSSAG00000062538 RPE65 (ENSSSAG00000112197) fnbp1l (ENSSSAG00000062755) bcar3 (ENSSSAG00000063319) zgc:171480 (ENSSSAG00000063345) slc5a9 (ENSSSAG00000063359) #22 gsh0 (ENSSSAG00000063809) ENSSSAG00000087728 ENSSSAG00000063813 spata6 (ENSSSAG00000106644) ##23 AGBL4 (ENSSSAG00000106741) ##24 ENSSSAG00000090996 agbl4 (ENSSSAG00000063825) ##24 ENSSSAG00000085418 elavl4 (ENSSSAG00000063874) dmrta2 (ENSSSAG00000120235) faf1 (ENSSSAG00000065255) cdkn2c (ENSSSAG00000093543) rnf11b (ENSSSAG00000066116) TTC39A (ENSSSAG00000066137) ENSSSAG00000066261 River trout MODERN SPECIES 14 LRRC24 (ENSSTUG00000037062) ttc14 (ENSSTUG00000037083) fxr1 (ENSSTUG00000037446) dnajc19 (ENSSTUG00000039802) ENSSTUG00000039840 lrrc40 (ENSSTUG00000039866) ENSSTUG00000039939 ENSSTUG00000039945 LRRC7 (ENSSTUG00000040027) depdc1a (ENSSTUG00000040140) RPE65 (ENSSTUG00000040173) si:ch211-198n5.11 (ENSSTUG00000040753) fnbp1l (ENSSTUG00000040947) bcar3 (ENSSTUG00000041017) zgc:171480 (ENSSTUG00000041056) slc5a9 (ENSSTUG00000041092) #22 gclm (ENSSTUG00000041215) ENSSTUG00000041234 spata6 (ENSSTUG00000041260) ##23 bend5 (ENSSTUG00000041354) #25 elavl4 (ENSSTUG00000041687) dmrta2 (ENSSTUG00000043322) faf1 (ENSSTUG00000043360) cdkn2c (ENSSTUG00000044064) rnf11b (ENSSTUG00000044067) TTC39A (ENSSTUG00000044079) ENSSTUG00000044323 calr (ENSSTUG00000046005) tor3a (ENSSTUG00000046082) osbpl9 (ENSSTUG00000046142) abl2 (ENSSTUG00000046473) Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000154690.d.a ENSGT00950000182888.a.a.b.f ENSGT00950000182915.b.b.a.a.cb.b ENSGT00940000155751.a.c ENSGT00950000182917.a.b.a.j ENSGT00730000110988.wb.a.c ENSGT00940000160194.l ENSGT00940000154831.h.a ENSGT00940000161649.f ENSGT00940000157399.a ENSGT00940000155042.a.a.f ##24 ENSGT00390000001724.l.a.b #25 ENSGT00530000063821.a ##23 ENSGT00510000048142.v ENSGT00510000047658.c ENSGT00940000157546 #22 ENSGT00940000154130.a.a.b.m ENSGT00950000183047.c.b.h ENSGT00940000164186.a ENSGT00950000182913.B.f.f ENSGT00950000182976.b.a.d ENSGT00940000156262.y ENSGT00940000156968.o ENSGT00950000183189.a.b.a.k.a ENSGT00940000154384 ENSGT00950000183189.a.b.a.k.b.b ENSGT00940000160141.e.b.a ENSGT00990000204094.c.b ENSGT00940000155297.hb.b.b ENSGT00460000041630 ENSGT01050000244897.a.a.b.b.a Rainbow trout MODERN SPECIES 26 ENSOMYG00000058030 TTC39A (ENSOMYG00000018236) ENSOMYG00000055050 rnf11b (ENSOMYG00000003362) cdkn2c (ENSOMYG00000018160) faf1 (ENSOMYG00000018005) dmrta2 (ENSOMYG00000017966) ENSOMYG00000067290 elavl4 (ENSOMYG00000017960) bend5 (ENSOMYG00000017858) #25 ENSOMYG00000057857 spata6 (ENSOMYG00000017805) ##23 ENSOMYG00000017789 gclm (ENSOMYG00000017785) ENSOMYG00000017784 ENSOMYG00000017216 #22 ENSOMYG00000017088 ENSOMYG00000016042 si:ch211-198n5.11 (ENSOMYG00000015763) RPE65 (ENSOMYG00000015503) depdc1a (ENSOMYG00000015417) ENSOMYG00000075779 LRRC7 (ENSOMYG00000015364) LRRC40 (ENSOMYG00000015333) ENSOMYG00000015299 ENSOMYG00000014274 ENSOMYG00000062422 ENSOMYG00000059700 ENSOMYG00000075544 ENSOMYG00000014127 ENSOMYG00000013852 Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000154690.d.a ENSGT00950000182888.a.a.b.f ENSGT00950000182915.b.b.a.a.cb.b ENSGT00940000155751.a.c ENSGT00950000182917.a.b.a.j ENSGT00730000110988.wb.a.c ENSGT00940000160194.l ENSGT00940000154831.h.a ENSGT00940000161649.f ENSGT00940000157399.a ENSGT00940000155042.a.a.f ##24 ENSGT00390000001724.l.a.b #25 ENSGT00530000063821.a ##23 ENSGT00510000048142.v ENSGT00510000047658.c ENSGT00940000157546 #22 ENSGT00940000154130.a.a.b.m ENSGT00950000183047.c.b.h ENSGT00940000164186.a ENSGT00950000182913.B.f.f ENSGT00950000182976.b.a.d ENSGT00940000156262.y ENSGT00940000156968.o ENSGT00950000183189.a.b.a.k.a ENSGT00940000154384 ENSGT00950000183189.a.b.a.k.b.a ENSGT00940000180153 ENSGT00940000160141.e.b.a ENSGT00990000204094.c.b ENSGT00940000155297.hb.b.b ENSGT00460000041630 Coho salmon MODERN SPECIES 4 osbpl9 (ENSOKIG00005027619) tor3a (ENSOKIG00005029178) calr (ENSOKIG00005029200) ENSOKIG00005029304 TTC39A (ENSOKIG00005029558) rnf11b (ENSOKIG00005029989) cdkn2c (ENSOKIG00005030007) faf1 (ENSOKIG00005030063) dmrta2 (ENSOKIG00005030708) elavl4 (ENSOKIG00005030733) AGBL4 (ENSOKIG00005030839) ##24 ENSOKIG00005030924 spata6 (ENSOKIG00005030930) ##23 ENSOKIG00005030940 gclm (ENSOKIG00005030983) slc5a9 (ENSOKIG00005031041) #22 ENSOKIG00005031306 bcar3 (ENSOKIG00005031321) FNBP1L (ENSOKIG00005031481) si:ch211-198n5.11 (ENSOKIG00005032544) RPE65 (ENSOKIG00005032666) depdc1a (ENSOKIG00005033179) LRRC7 (ENSOKIG00005033328) ENSOKIG00005033541 lrrc40 (ENSOKIG00005033596) ENSOKIG00005034048 dnajc19 (ENSOKIG00005034062) fxr1 (ENSOKIG00005034123) ENSOKIG00005034304 LRRC24 (ENSOKIG00005034351) ENSOKIG00005034359 Chinook salmon MODERN SPECIES 29 hspa1b (ENSOTSG00005032936) ahcyl1 (ENSOTSG00005032935) ENSOTSG00005032934 ENSOTSG00005032933 sort1b (ENSOTSG00005032930) ENSOTSG00005032925 AMIGO1 (ENSOTSG00005032924) GPR61 (ENSOTSG00005032922) ENSOTSG00005032921 elavl4 (ENSOTSG00005032776) bend5 (ENSOTSG00005032775) #25 AGBL4 (ENSOTSG00005032773) ##24 spata6 (ENSOTSG00005032767) ##23 ENSOTSG00005032763 gclm (ENSOTSG00005032760) slc5a9 (ENSOTSG00005032429) #22 bcar3 (ENSOTSG00005032428) fnbp1l (ENSOTSG00005032192) si:ch211-198n5.11 (ENSOTSG00005032130) RPE65 (ENSOTSG00005031467) depdc1a (ENSOTSG00005031320) ENSOTSG00005031319 ssbp4 (ENSOTSG00005031318) fkbp8 (ENSOTSG00005031304) ell (ENSOTSG00005031283) DOT1L (ENSOTSG00005031276) amh (ENSOTSG00005031275) oaz1a (ENSOTSG00005031272) org (ENSOTSG00005031270) lingo3a (ENSOTSG00005031269) nfil3-4 (ENSOTSG00005031267) Huchen MODERN SPECIES 289 depdc1a (ENSHHUG00000003263) RPE65 (ENSHHUG00000003060) si:ch211-198n5.11 (ENSHHUG00000003048) fnbp1l (ENSHHUG00000002357) bcar3 (ENSHHUG00000002347) ENSHHUG00000002339 slc5a9 (ENSHHUG00000002065) #22 gclm (ENSHHUG00000002032) spata6 (ENSHHUG00000001982) ##23 bend5 (ENSHHUG00000001976) #25 AGBL4 (ENSHHUG00000001820) ##24 elavl4 (ENSHHUG00000001695) ENSHHUG00000001658 ENSHHUG00000001532 CARTPT (ENSHHUG00000001484) ENSHHUG00000001481 ENSHHUG00000001474 ENSHHUG00000001469 NRDC (ENSHHUG00000001084) SLITRK3 (ENSHHUG00000001069) Northern pike MODERN SPECIES 7 plpp6 (ENSELUG00000007194) prdx6 (ENSELUG00000007213) jun (ENSELUG00000001256) si:dkey-86e18.1 (ENSELUG00000007229) faslg (ENSELUG00000000265) ENSELUG00000026784 angptl1a (ENSELUG00000007290) ralgps2 (ENSELUG00000007355) coa7 (ENSELUG00000026445) zyg11 (ENSELUG00000007446) echdc2 (ENSELUG00000007531) ENSELUG00000007543 fnbp1l (ENSELUG00000007590) bcar3 (ENSELUG00000007678) zgc:171480 (ENSELUG00000033034) slc5a9 (ENSELUG00000001089) #22 gclm (ENSELUG00000007757) dnttip2 (ENSELUG00000007775) spata6 (ENSELUG00000007831) ##23 bend5 (ENSELUG00000007876) #25 ENSELUG00000030738 AGBL4 (ENSELUG00000007969) ##24 elavl4 (ENSELUG00000008025) dmrta2 (ENSELUG00000008044) faf1 (ENSELUG00000008116) cdkn2c (ENSELUG00000008153) rnf11b (ENSELUG00000008168) TTC39A (ENSELUG00000008202) ENSELUG00000008258 ENSELUG00000008294 tor3a (ENSELUG00000008314) Elephant shark MODERN SPECIES 1597 ENSCMIG00000019438 ENSCMIG00000019434 frem1b (ENSCMIG00000019432) nfia (ENSCMIG00000019423) tm2d1 (ENSCMIG00000019416) PATJ (ENSCMIG00000019399) ENSCMIG00000019386 tal1 (ENSCMIG00000019384) #13 stil (ENSCMIG00000019380) #14 cmpk (ENSCMIG00000019378) foxe3 (ENSCMIG00000019375) ENSCMIG00000019373 #17 TRABD2B (ENSCMIG00000019370) #18 ENSCMIG00000019364 zgc:171480 (ENSCMIG00000019361) slc5a9 (ENSCMIG00000019236) #22 ENSCMIG00000019181 #23 agbl4 (ENSCMIG00000019163) #24 elavl4 (ENSCMIG00000019132) ENSCMIG00000019123 Cyclostomata ANCESTRAL SPECIES ENSGT00940000157546 #22 Lamprey MODERN SPECIES 2236 slc5a9 (ENSPMAG00000006859) #22 Hagfish MODERN SPECIES 618 ENSEBUG00000011884 ENSEBUG00000003717 ENSEBUG00000001231 atp5pb (ENSEBUG00000016234) tmem41b (ENSEBUG00000010880) ipo7 (ENSEBUG00000003477) ENSEBUG00000004545 ENSEBUG00000009060 ENSEBUG00000006968 ENSEBUG00000011112 slc5a9 (ENSEBUG00000004852) #22 ENSEBUG00000005632 ENSEBUG00000002962 ENSEBUG00000002215 ENSEBUG00000016460 ENSEBUG00000009520 ENSEBUG00000008338 WT1 (ENSEBUG00000013909) NOSIP (ENSEBUG00000001397) ENSEBUG00000003628 ptdss2 (ENSEBUG00000005225) ENSEBUG00000012801 ighmbp2 (ENSEBUG00000010471) ENSEBUG00000008024 tnpo3 (ENSEBUG00000016931) CPT1C (ENSEBUG00000012957)