Tetrapoda	ANCESTRAL SPECIES	11	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Amniota	ANCESTRAL SPECIES	15	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Sauria	ANCESTRAL SPECIES	10	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Episquamata	ANCESTRAL SPECIES	9	ENSGT00390000008748.b	ENSGT00940000157725	ENSGT00940000158086	ENSGT00390000006548.b #10	ENSGT00940000164099.a.b #11	ENSGT00940000155524 #12	ENSGT00940000156817 #13	ENSGT00940000156926 #14	ENSGT00940000154905 #15	ENSGT00390000014038 #16	ENSGT00940000159572 #17	ENSGT00390000008859.b.d #18	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Common wall lizard	MODERN SPECIES	5	ENSPMRG00000015241 #7	ENSPMRG00000015243 #8	ENSPMRG00000015246 #9	RPS17 (ENSPMRG00000015254) #10	ENSPMRG00000015265 #11	CPEB1 (ENSPMRG00000015272) #12	AP3B2 (ENSPMRG00000015532) #13	NR2E3 (ENSPMRG00000017390) #14	MYO9A (ENSPMRG00000017442) #15	SENP8 (ENSPMRG00000017584) #16	GRAMD2A (ENSPMRG00000017590) #17	PKM (ENSPMRG00000017617) #18	ATOSA (ENSPMRG00000017681) #19	ARPP19 (ENSPMRG00000017689) #20	MYO5A (ENSPMRG00000018092) #21	MYO5C (ENSPMRG00000020906) #22	GNB5 (ENSPMRG00000022546) #23	BCL2L10 (ENSPMRG00000022559) #24	MAPK6 (ENSPMRG00000022564) #25	LEO1 (ENSPMRG00000022571) #26	ENSPMRG00000022575 #27	TMOD2 (ENSPMRG00000022582) #28	LYSMD2 (ENSPMRG00000022587) #29	SCG3 (ENSPMRG00000022597) #30	AP4E1 (ENSPMRG00000022643) #31	TNFAIP8L3 (ENSPMRG00000022686) #32	GLDN (ENSPMRG00000022697) #33	DMXL2 (ENSPMRG00000022800) #34	ENSPMRG00000022984 #35	SEMA6D (ENSPMRG00000023005) #36	ENSPMRG00000023034 #37
Toxicofera	ANCESTRAL SPECIES	15	ENSGT00390000005300	ENSGT00390000008748.b	ENSGT00940000157725	ENSGT00940000158086	ENSGT00390000006548.b #10	ENSGT00940000155524 #12	ENSGT00940000156817 #13	ENSGT00940000156926 #14	ENSGT00940000154905 #15	ENSGT00390000014038 #16	ENSGT00940000159572 #17	ENSGT00390000008859.b.d #18	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Elapidae	ANCESTRAL SPECIES	12	ENSGT00390000008748.b	ENSGT00940000157725	ENSGT00940000158086	ENSGT00950000182812.F.b #9	ENSGT00390000006548.b #10	ENSGT00940000155524 #12	ENSGT00940000156817 #13	ENSGT00940000156926 #14	ENSGT00940000154905 #15	ENSGT00390000014038 #16	ENSGT00940000159572 #17	ENSGT00390000008859.b.d #18	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915.q	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Indian cobra	MODERN SPECIES	14	ENSNNAG00000011856	RBPMS2 (ENSNNAG00000011929)	ENSNNAG00000011963 #9	ENSNNAG00000011992	RPS17 (ENSNNAG00000012013) #10	ENSNNAG00000012149 ##8	CPEB1 (ENSNNAG00000012215) #12	AP3B2 (ENSNNAG00000012594) #13	NR2E3 (ENSNNAG00000016855) #14	MYO9A (ENSNNAG00000016912) #15	ENSNNAG00000016953 #17	PKM (ENSNNAG00000016964) #18	ATOSA (ENSNNAG00000016987) #19	ARPP19 (ENSNNAG00000017109) #20	MYO5A (ENSNNAG00000017325) #21	MYO5C (ENSNNAG00000018317) #22	ENSNNAG00000018565 #23	ENSNNAG00000018570 #23	ENSNNAG00000018575 #24	MAPK6 (ENSNNAG00000018578) #25	LEO1 (ENSNNAG00000018584) #26	TMOD3 (ENSNNAG00000018589) #27	TMOD2 (ENSNNAG00000018592) #28	LYSMD2 (ENSNNAG00000018597) #29	SCG3 (ENSNNAG00000018602) #30	AP4E1 (ENSNNAG00000018619) #31	TNFAIP8L3 (ENSNNAG00000018632) #32	ENSNNAG00000018635	ENSNNAG00000018638	ENSNNAG00000018641 #33	DMXL2 (ENSNNAG00000018652) #34
Elapidae_a	ANCESTRAL SPECIES	17	ENSGT00390000008748.b.c	ENSGT00940000157725	ENSGT00940000158086	ENSGT00950000182812.F.b #9	ENSGT00390000006548.b #10	ENSGT00940000155524 #12	ENSGT00940000156817 #13	ENSGT00940000156926 #14	ENSGT00940000154905 #15	ENSGT00390000014038 #16	ENSGT00940000159572 #17	ENSGT00390000008859.b.d #18	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b.a #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915.q	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Acanthophiinae	ANCESTRAL SPECIES	17	ENSGT00390000005300	ENSGT00390000008748.b.c	ENSGT00940000157725	ENSGT00940000158086	ENSGT00390000006548.b #10	ENSGT00940000155524 #12	ENSGT00940000156817 #13	ENSGT00940000156926 #14	ENSGT00940000154905 #15	ENSGT00390000014038 #16	ENSGT00940000159572 #17	ENSGT00390000008859.b.d #18	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b.a #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915.q	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	217	OAZ2 (ENSNSUG00000019491)	RBPMS2 (ENSNSUG00000019490)	ENSNSUG00000019489 #9	ENSNSUG00000019488 ##8	RPS17 (ENSNSUG00000019484) #10	CPEB1 (ENSNSUG00000019483) #12	AP3B2 (ENSNSUG00000019482) #13	NR2E3 (ENSNSUG00000019470) #14	MYO9A (ENSNSUG00000019466) #15	SENP8 (ENSNSUG00000019465) #16	GRAMD2A (ENSNSUG00000019464) #17	PKM (ENSNSUG00000019463) #18	ATOSA (ENSNSUG00000019462) #19	ARPP19 (ENSNSUG00000019461) #20	MYO5A (ENSNSUG00000019460) #21	ENSNSUG00000019459 #22	ENSNSUG00000019458 #22	ENSNSUG00000019457 #23	ENSNSUG00000019456 #23	ENSNSUG00000019455 #24	MAPK6 (ENSNSUG00000019454) #25
Mainland tiger snake	MODERN SPECIES	217	RBPMS2 (ENSNSUG00000019490)	ENSNSUG00000019489 #9	ENSNSUG00000019488 ##8	RPS17 (ENSNSUG00000019484) #10	CPEB1 (ENSNSUG00000019483) #12	AP3B2 (ENSNSUG00000019482) #13	NR2E3 (ENSNSUG00000019470) #14	MYO9A (ENSNSUG00000019466) #15	SENP8 (ENSNSUG00000019465) #16	GRAMD2A (ENSNSUG00000019464) #17	PKM (ENSNSUG00000019463) #18	ATOSA (ENSNSUG00000019462) #19	ARPP19 (ENSNSUG00000019461) #20	MYO5A (ENSNSUG00000019460) #21	ENSNSUG00000019459 #22	ENSNSUG00000019458 #22	ENSNSUG00000019457 #23	ENSNSUG00000019456 #23	ENSNSUG00000019455 #24	MAPK6 (ENSNSUG00000019454) #25
Eastern brown snake	MODERN SPECIES	44	TRIP4 (ENSPTXG00000013263)	ZNF609 (ENSPTXG00000013262)	OAZ2 (ENSPTXG00000013261)	RBPMS2 (ENSPTXG00000013260)	RPS17 (ENSPTXG00000013255) #10	CPEB1 (ENSPTXG00000013254) #12	AP3B2 (ENSPTXG00000013253) #13	NR2E3 (ENSPTXG00000013235) #14	MYO9A (ENSPTXG00000013233) #15	SENP8 (ENSPTXG00000013232) #16	GRAMD2A (ENSPTXG00000013230) #17	PKM (ENSPTXG00000013229) #18	ATOSA (ENSPTXG00000013227) #19	ARPP19 (ENSPTXG00000013225) #20	MYO5A (ENSPTXG00000012559) #21	MYO5C (ENSPTXG00000011844) #22	GNB5 (ENSPTXG00000011841) #23	MAPK6 (ENSPTXG00000011840) #25	LEO1 (ENSPTXG00000011839) #26	TMOD3 (ENSPTXG00000011837) #27	ENSPTXG00000011836 #28	LYSMD2 (ENSPTXG00000011835) #29	SCG3 (ENSPTXG00000011834) #30	AP4E1 (ENSPTXG00000011833) #31	TNFAIP8L3 (ENSPTXG00000011832) #32	CYP19A1 (ENSPTXG00000011830)	GLDN (ENSPTXG00000011825) #33	DMXL2 (ENSPTXG00000011822) #34	SEMA6D (ENSPTXG00000011819) #36	SLC24A5 (ENSPTXG00000011818)	MYEF2 (ENSPTXG00000011816)
Blue-lipped sea krait	MODERN SPECIES	3791																MYO5C (ENSLLTG00000004751) #22	GNB5 (ENSLLTG00000004680) #23	ENSLLTG00000004662 #24
Lizard	MODERN SPECIES	1091				ENSACAG00000012227	ENSACAG00000012225 #10	ENSACAG00000026968 #12	AP3B2 (ENSACAG00000011959) #13	NR2E3 (ENSACAG00000011910) #14	MYO9A (ENSACAG00000011552) #15	SENP8 (ENSACAG00000011545) #16	GRAMD2A (ENSACAG00000011536) #17	PKM (ENSACAG00000011445) #18	ATOSA (ENSACAG00000011388) #19	ARPP19 (ENSACAG00000023267) #20	MYO5A (ENSACAG00000010982) #21	MYO5C (ENSACAG00000029269) #22	GNB5 (ENSACAG00000010868) #23
tuatara	MODERN SPECIES	1277	ENSSPUG00000004474	ENSSPUG00000004491	PRTG (ENSSPUG00000004500)	PYGO1 (ENSSPUG00000004526)	DNAAF4 (ENSSPUG00000004532)	CCPG1 (ENSSPUG00000004549)	PIGB (ENSSPUG00000004572)	RAB27A (ENSSPUG00000004692)	RSL24D1 (ENSSPUG00000004700)	UNC13C (ENSSPUG00000004753)	WDR72 (ENSSPUG00000004992)	ONECUT1 (ENSSPUG00000005151)	ATOSA (ENSSPUG00000005167) #19	ARPP19 (ENSSPUG00000005192) #20	MYO5A (ENSSPUG00000005207) #21	MYO5C (ENSSPUG00000005272) #22	ENSSPUG00000005326 #23	ENSSPUG00000005346 #23	BCL2L10 (ENSSPUG00000005368) #24	MAPK6 (ENSSPUG00000005374) #25	LEO1 (ENSSPUG00000005384) #26	ENSSPUG00000005398 #27	ENSSPUG00000005412 #28
Archelosauria	ANCESTRAL SPECIES	13	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Archosauria	ANCESTRAL SPECIES	9	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Neognathae	ANCESTRAL SPECIES	11	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Galloanserae	ANCESTRAL SPECIES	10	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00940000168396	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Anatidae	ANCESTRAL SPECIES	23	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Duck	MODERN SPECIES	2	ENSAPLG00000030615	NEDD4 (ENSAPLG00000004254)	PRTG (ENSAPLG00000003723)	PYGO1 (ENSAPLG00000027137)	DNAAF4 (ENSAPLG00000003228)	CCPG1 (ENSAPLG00000002976)	ENSAPLG00000018832	RAB27A (ENSAPLG00000002447)	RSL24D1 (ENSAPLG00000016498)	UNC13C (ENSAPLG00000007445)	WDR72 (ENSAPLG00000009012)	ENSAPLG00000030229	ATOSA (ENSAPLG00000009208) #19	ARPP19 (ENSAPLG00000024461) #20	MYO5A (ENSAPLG00000003054) #21	MYO5C (ENSAPLG00000023919) #22	GNB5 (ENSAPLG00000004949) #23	MAPK6 (ENSAPLG00000005030) #25	LEO1 (ENSAPLG00000009700) #26	TMOD3 (ENSAPLG00000009038) #27	TMOD2 (ENSAPLG00000008311) #28	LYSMD2 (ENSAPLG00000003096) #29	SCG3 (ENSAPLG00000003099) #30	AP4E1 (ENSAPLG00000003399) #31	SQOR (ENSAPLG00000003727)	BLOC1S6 (ENSAPLG00000004081)	SLC30A4 (ENSAPLG00000004133)	C15orf48 (ENSAPLG00000017258)	SPATA5L1 (ENSAPLG00000004210)	DTWD1 (ENSAPLG00000004237)	FGF7 (ENSAPLG00000004328)
Pink-footed goose	MODERN SPECIES	21	NEDD4 (ENSABRG00000020096)	PRTG (ENSABRG00000020122)	PYGO1 (ENSABRG00000020155)	DNAAF4 (ENSABRG00000020158)	PIERCE2 (ENSABRG00000020164)	CCPG1 (ENSABRG00000020166)	PIGB (ENSABRG00000020176)	RAB27A (ENSABRG00000020187)	RSL24D1 (ENSABRG00000020189)	UNC13C (ENSABRG00000020364)	WDR72 (ENSABRG00000021450)	ONECUT1 (ENSABRG00000021484)	ATOSA (ENSABRG00000021491) #19	MYO5A (ENSABRG00000021587) #21	ARPP19 (ENSABRG00000021869) #20	MYO5C (ENSABRG00000022127) #22	GNB5 (ENSABRG00000022597) #23	ENSABRG00000022601 #24	MAPK6 (ENSABRG00000022602) #25	LEO1 (ENSABRG00000022603) #26	TMOD3 (ENSABRG00000022606) #27	TMOD2 (ENSABRG00000022610) #28	LYSMD2 (ENSABRG00000022618) #29	SCG3 (ENSABRG00000022620) #30	AP4E1 (ENSABRG00000022628) #31	TNFAIP8L3 (ENSABRG00000022637) #32	CYP19A1 (ENSABRG00000022639)	GLDN (ENSABRG00000022640) #33	DMXL2 (ENSABRG00000022775) #34
Phasianidae	ANCESTRAL SPECIES	11	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00940000168396	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Japanese quail	MODERN SPECIES	1	PRTG (ENSCJPG00005016246)	PYGO1 (ENSCJPG00005016247)	ENSCJPG00005016248	CCPG1 (ENSCJPG00005016249)	ENSCJPG00005016250	PIGB (ENSCJPG00005016251)	RAB27A (ENSCJPG00005016252)	RSL24D1 (ENSCJPG00005016253)	UNC13C (ENSCJPG00005016257)	ENSCJPG00005016693	ENSCJPG00005016694	ONECUT1 (ENSCJPG00005016699)	ATOSA (ENSCJPG00005016700) #19	MYO5A (ENSCJPG00005016709) #21	ARPP19 (ENSCJPG00005017879) #20	MYO5C (ENSCJPG00005017883) #22	GNB5 (ENSCJPG00005018492) #23	ENSCJPG00005018600 #24	MAPK6 (ENSCJPG00005018602) #25	LEO1 (ENSCJPG00005018603) #26	TMOD3 (ENSCJPG00005018619) #27	TMOD2 (ENSCJPG00005018623) #28	LYSMD2 (ENSCJPG00005018624) #29	SCG3 (ENSCJPG00005018625) #30	AP4E1 (ENSCJPG00005018626) #31	TNFAIP8L3 (ENSCJPG00005018627) #32	ENSCJPG00005018628	ENSCJPG00005018629	GLDN (ENSCJPG00005018631) #33	DMXL2 (ENSCJPG00005018633) #34	SEMA6D (ENSCJPG00005019571) #36
Turkey	MODERN SPECIES	3	PTPN9 (ENSMGAG00000003007)	SNUPN (ENSMGAG00000002903)	SNX33 (ENSMGAG00000002897)	ENSMGAG00000003161	ENSMGAG00000017136 #31	ENSMGAG00000006513 #29	ENSMGAG00000006516 #30	ENSMGAG00000006466 #28	ENSMGAG00000006383 #26	ENSMGAG00000006403 #27	ENSMGAG00000006369 #25	ENSMGAG00000006348 #23	ENSMGAG00000006309 #22	ENSMGAG00000006197 #21	ENSMGAG00000019708 #22	ENSMGAG00000021203 #22	ENSMGAG00000020116 #21	ENSMGAG00000018111 #21	ARPP19 (ENSMGAG00000006191) #20	ENSMGAG00000006146 #19	ENSMGAG00000017683	ENSMGAG00000018240	ENSMGAG00000006111	ENSMGAG00000019344	ENSMGAG00000006032	ENSMGAG00000006007	ENSMGAG00000005965	ENSMGAG00000005993	DNAAF4 (ENSMGAG00000005949)	ENSMGAG00000017699	ENSMGAG00000005943
Turkey	MODERN SPECIES	3	ENSMGAG00000002855	ENSMGAG00000003179	ENSMGAG00000020100	PTPN9 (ENSMGAG00000003007)	SNUPN (ENSMGAG00000002903)	SNX33 (ENSMGAG00000002897)	ENSMGAG00000003161	ENSMGAG00000017136 #31	ENSMGAG00000006513 #29	ENSMGAG00000006516 #30	ENSMGAG00000006466 #28	ENSMGAG00000006383 #26	ENSMGAG00000006403 #27	ENSMGAG00000006369 #25	ENSMGAG00000006348 #23	ENSMGAG00000006309 #22	ENSMGAG00000006197 #21	ENSMGAG00000019708 #22	ENSMGAG00000021203 #22	ENSMGAG00000020116 #21	ENSMGAG00000018111 #21	ARPP19 (ENSMGAG00000006191) #20	ENSMGAG00000006146 #19	ENSMGAG00000017683	ENSMGAG00000018240	ENSMGAG00000006111	ENSMGAG00000019344	ENSMGAG00000006032	ENSMGAG00000006007	ENSMGAG00000005965	ENSMGAG00000005993
Chicken	MODERN SPECIES	1	NEDD4 (ENSGALG00010022466)	PRTG (ENSGALG00010022482)	PYGO1 (ENSGALG00010021668)	DNAAF4 (ENSGALG00010021678)	CCPG1 (ENSGALG00010021686)	PIGB (ENSGALG00010021691)	PIGBOS1 (ENSGALG00010021735)	RAB27A (ENSGALG00010021713)	RSL24D1 (ENSGALG00010021745)	UNC13C (ENSGALG00010021779)	WDR72 (ENSGALG00010021813)	ONECUT1 (ENSGALG00010021825)	FAM214A (ENSGALG00010020708) #19	ARPP19 (ENSGALG00010020887) #20	MYO5A (ENSGALG00010020944) #21	MYO5C (ENSGALG00010020962) #22	GNB5 (ENSGALG00010020973) #23	BCL2L10 (ENSGALG00010020978) #24	MAPK4 (ENSGALG00010020989) #25	LEO1 (ENSGALG00010021010) #26	TMOD3 (ENSGALG00010023432) #27	TMOD2 (ENSGALG00010022520) #28	LYSMD2 (ENSGALG00010022539) #29	SCG3 (ENSGALG00010022554) #30	AP4E1 (ENSGALG00010022573) #31	TNFAIP8L3 (ENSGALG00010022579) #32	CYP19A1 (ENSGALG00010022601)	GLDN (ENSGALG00010022616) #33	DMXL2 (ENSGALG00010022637) #34	SEMA6D (ENSGALG00010022698) #36	SLC24A5 (ENSGALG00010018219)
Neognathae_b	ANCESTRAL SPECIES	13	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Neognathae_c	ANCESTRAL SPECIES	15	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Kakapo	DUPLICATION
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	1	PYGO1 (ENSSHBG00005020087)	DNAAF4 (ENSSHBG00005020083)	ENSSHBG00005020082	CCPG1 (ENSSHBG00005020079)	PIGB (ENSSHBG00005020077)	RAB27A (ENSSHBG00005020074)	RSL24D1 (ENSSHBG00005020069)	UNC13C (ENSSHBG00005020067)	WDR72 (ENSSHBG00005020062)	ONECUT1 (ENSSHBG00005020057)	ATOSA (ENSSHBG00005020055) #19	ARPP19 (ENSSHBG00005020054) #20	MYO5A (ENSSHBG00005008273) #21	ENSSHBG00005007056 #22	ENSSHBG00005007044 #22	ENSSHBG00005007005 #22	GNB5 (ENSSHBG00005006762) #23	ENSSHBG00005006725	MAPK6 (ENSSHBG00005006718) #25	LEO1 (ENSSHBG00005006688) #26	TMOD3 (ENSSHBG00005006678) #27	TMOD2 (ENSSHBG00005006653) #28	LYSMD2 (ENSSHBG00005006645) #29	SCG3 (ENSSHBG00005006627) #30	AP4E1 (ENSSHBG00005006608) #31	TNFAIP8L3 (ENSSHBG00005006595) #32	CYP19A1 (ENSSHBG00005006580)	GLDN (ENSSHBG00005006562) #33	DMXL2 (ENSSHBG00005005661) #34	SEMA6D (ENSSHBG00005005232) #36	ENSSHBG00005005207
Kakapo	MODERN SPECIES	1	PRTG (ENSSHBG00005020090)	PYGO1 (ENSSHBG00005020087)	DNAAF4 (ENSSHBG00005020083)	ENSSHBG00005020082	CCPG1 (ENSSHBG00005020079)	PIGB (ENSSHBG00005020077)	RAB27A (ENSSHBG00005020074)	RSL24D1 (ENSSHBG00005020069)	UNC13C (ENSSHBG00005020067)	WDR72 (ENSSHBG00005020062)	ONECUT1 (ENSSHBG00005020057)	ATOSA (ENSSHBG00005020055) #19	ARPP19 (ENSSHBG00005020054) #20	MYO5A (ENSSHBG00005008273) #21	ENSSHBG00005007056 #22	ENSSHBG00005007044 #22	ENSSHBG00005007005 #22	GNB5 (ENSSHBG00005006762) #23	ENSSHBG00005006725	MAPK6 (ENSSHBG00005006718) #25	LEO1 (ENSSHBG00005006688) #26	TMOD3 (ENSSHBG00005006678) #27	TMOD2 (ENSSHBG00005006653) #28	LYSMD2 (ENSSHBG00005006645) #29	SCG3 (ENSSHBG00005006627) #30	AP4E1 (ENSSHBG00005006608) #31	TNFAIP8L3 (ENSSHBG00005006595) #32	CYP19A1 (ENSSHBG00005006580)	GLDN (ENSSHBG00005006562) #33	DMXL2 (ENSSHBG00005005661) #34	SEMA6D (ENSSHBG00005005232) #36
Kakapo	MODERN SPECIES	1	NEDD4 (ENSSHBG00005020102)	PRTG (ENSSHBG00005020090)	PYGO1 (ENSSHBG00005020087)	DNAAF4 (ENSSHBG00005020083)	ENSSHBG00005020082	CCPG1 (ENSSHBG00005020079)	PIGB (ENSSHBG00005020077)	RAB27A (ENSSHBG00005020074)	RSL24D1 (ENSSHBG00005020069)	UNC13C (ENSSHBG00005020067)	WDR72 (ENSSHBG00005020062)	ONECUT1 (ENSSHBG00005020057)	ATOSA (ENSSHBG00005020055) #19	ARPP19 (ENSSHBG00005020054) #20	MYO5A (ENSSHBG00005008273) #21	ENSSHBG00005007056 #22	ENSSHBG00005007044 #22	ENSSHBG00005007005 #22	GNB5 (ENSSHBG00005006762) #23	ENSSHBG00005006725	MAPK6 (ENSSHBG00005006718) #25	LEO1 (ENSSHBG00005006688) #26	TMOD3 (ENSSHBG00005006678) #27	TMOD2 (ENSSHBG00005006653) #28	LYSMD2 (ENSSHBG00005006645) #29	SCG3 (ENSSHBG00005006627) #30	AP4E1 (ENSSHBG00005006608) #31	TNFAIP8L3 (ENSSHBG00005006595) #32	CYP19A1 (ENSSHBG00005006580)	GLDN (ENSSHBG00005006562) #33	DMXL2 (ENSSHBG00005005661) #34
Golden eagle	MODERN SPECIES	21	NEDD4 (ENSACCG00020006105)	PRTG (ENSACCG00020006392)	PYGO1 (ENSACCG00020006412)	DNAAF4 (ENSACCG00020006423)	PIERCE2 (ENSACCG00020006437)	CCPG1 (ENSACCG00020006460)	PIGB (ENSACCG00020006496)	RAB27A (ENSACCG00020006510)	RSL24D1 (ENSACCG00020006521)	ENSACCG00020006537	WDR72 (ENSACCG00020006564)	ONECUT1 (ENSACCG00020006605)	ATOSA (ENSACCG00020006651) #19	ARPP19 (ENSACCG00020006678) #20	MYO5A (ENSACCG00020006715) #21	MYO5C (ENSACCG00020006796) #22	GNB5 (ENSACCG00020006835) #23	ENSACCG00020006851 #24	MAPK6 (ENSACCG00020006862) #25	LEO1 (ENSACCG00020006891) #26	TMOD3 (ENSACCG00020006919) #27	ENSACCG00020006937	TMOD2 (ENSACCG00020006949) #28	LYSMD2 (ENSACCG00020006962) #29	SCG3 (ENSACCG00020006973) #30	AP4E1 (ENSACCG00020006989) #31	TNFAIP8L3 (ENSACCG00020007006) #32	CYP19A1 (ENSACCG00020007017)	GLDN (ENSACCG00020007066) #33	DMXL2 (ENSACCG00020007138) #34	SEMA6D (ENSACCG00020007229) #36
Passeriformes	ANCESTRAL SPECIES	12	ENSGT01050000244970.b	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Passeriformes_d	ANCESTRAL SPECIES	12	ENSGT01050000244970.b	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Medium ground finch	MODERN SPECIES	16	RFX7 (ENSGFOG00000011617)	NEDD4 (ENSGFOG00000011597)	PRTG (ENSGFOG00000011574)	PYGO1 (ENSGFOG00000011567)	DNAAF4 (ENSGFOG00000011562)	CCPG1 (ENSGFOG00000011556)	PIGB (ENSGFOG00000011526)	RAB27A (ENSGFOG00000011507)	ENSGFOG00000011499	UNC13C (ENSGFOG00000009982)	WDR72 (ENSGFOG00000009836)	ONECUT1 (ENSGFOG00000009825)	ATOSA (ENSGFOG00000009815) #19	ARPP19 (ENSGFOG00000009809) #20	MYO5A (ENSGFOG00000003539) #21	MYO5C (ENSGFOG00000002954) #22	GNB5 (ENSGFOG00000002918) #23	MAPK6 (ENSGFOG00000002909) #25	LEO1 (ENSGFOG00000002888) #26	TMOD3 (ENSGFOG00000002849) #27	TMOD2 (ENSGFOG00000002833) #28	LYSMD2 (ENSGFOG00000009174) #29	SCG3 (ENSGFOG00000008985) #30	AP4E1 (ENSGFOG00000008961) #31	TNFAIP8L3 (ENSGFOG00000008955) #32	CYP19A1 (ENSGFOG00000008950)	GLDN (ENSGFOG00000008944) #33	DMXL2 (ENSGFOG00000008859) #34	SEMA6D (ENSGFOG00000008832) #36	SLC24A5 (ENSGFOG00000008826)	MYEF2 (ENSGFOG00000008812)
Passeroidea	ANCESTRAL SPECIES	12	ENSGT01050000244970.b	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Zebra finch	MODERN SPECIES	1	TEX9 (ENSTGUG00000006348)	RFX7 (ENSTGUG00000025950)	NEDD4 (ENSTGUG00000006360)	PYGO1 (ENSTGUG00000027625)	DNAAF4 (ENSTGUG00000006467)	CCPG1 (ENSTGUG00000006492)	PIGB (ENSTGUG00000006499)	RAB27A (ENSTGUG00000023269)	RSL24D1 (ENSTGUG00000019056)	UNC13C (ENSTGUG00000006535)	WDR72 (ENSTGUG00000006614)	ONECUT1 (ENSTGUG00000006638)	ATOSA (ENSTGUG00000006642) #19	ARPP19 (ENSTGUG00000019761) #20	MYO5A (ENSTGUG00000006654) #21	MYO5C (ENSTGUG00000006734) #22	GNB5 (ENSTGUG00000006767) #23	BCL2L10 (ENSTGUG00000027412) #24	MAPK6 (ENSTGUG00000006789) #25	LEO1 (ENSTGUG00000006815) #26	TMOD3 (ENSTGUG00000006847) #27	TMOD2 (ENSTGUG00000006888) #28	LYSMD2 (ENSTGUG00000006918) #29	SCG3 (ENSTGUG00000006921) #30	AP4E1 (ENSTGUG00000006963) #31	TNFAIP8L3 (ENSTGUG00000028388) #32	CYP19A1 (ENSTGUG00000006993)	GLDN (ENSTGUG00000006955) #33	DMXL2 (ENSTGUG00000007026) #34	SEMA6D (ENSTGUG00000007065) #36	SLC24A5 (ENSTGUG00000007117)
Common canary	MODERN SPECIES	12	NEDD4 (ENSSCAG00000000490)	PRTG (ENSSCAG00000000517)	PYGO1 (ENSSCAG00000000533)	DNAAF4 (ENSSCAG00000000540)	CCPG1 (ENSSCAG00000000559)	PIGB (ENSSCAG00000000567)	RAB27A (ENSSCAG00000000573)	RSL24D1 (ENSSCAG00000000580)	UNC13C (ENSSCAG00000000605)	ENSSCAG00000000665	WDR72 (ENSSCAG00000000670)	ONECUT1 (ENSSCAG00000000707)	ATOSA (ENSSCAG00000000720) #19	ARPP19 (ENSSCAG00000000781) #20	MYO5A (ENSSCAG00000000813) #21	MYO5C (ENSSCAG00000001934) #22	GNB5 (ENSSCAG00000004772) #23	ENSSCAG00000004803	MAPK6 (ENSSCAG00000004810) #25	LEO1 (ENSSCAG00000004825) #26	TMOD3 (ENSSCAG00000004835) #27	TMOD2 (ENSSCAG00000004844) #28	LYSMD2 (ENSSCAG00000004850) #29	SCG3 (ENSSCAG00000004858) #30	AP4E1 (ENSSCAG00000004868) #31	TNFAIP8L3 (ENSSCAG00000004882) #32	CYP19A1 (ENSSCAG00000004887)	GLDN (ENSSCAG00000004900) #33	DMXL2 (ENSSCAG00000004908) #34	SEMA6D (ENSSCAG00000004959) #36	SLC24A5 (ENSSCAG00000005010)
Flycatcher	MODERN SPECIES	1	NEDD4 (ENSFALG00000012079)	PRTG (ENSFALG00000012060)	PYGO1 (ENSFALG00000012052)	DNAAF4 (ENSFALG00000012048)	CCPG1 (ENSFALG00000012036)	PIGB (ENSFALG00000012011)	RAB27A (ENSFALG00000026250)	RSL24D1 (ENSFALG00000012001)	UNC13C (ENSFALG00000011972)	WDR72 (ENSFALG00000011944)	ONECUT1 (ENSFALG00000011940)	ATOSA (ENSFALG00000011922) #19	ARPP19 (ENSFALG00000011902) #20	ENSFALG00000026778	MYO5A (ENSFALG00000011894) #21	MYO5C (ENSFALG00000011882) #22	GNB5 (ENSFALG00000011866) #23	MAPK6 (ENSFALG00000011855) #25	ENSFALG00000011844 #26	TMOD3 (ENSFALG00000022899) #27	TMOD2 (ENSFALG00000025733) #28	ENSFALG00000011748 #29	ENSFALG00000027305 #30	AP4E1 (ENSFALG00000011736) #31	TNFAIP8L3 (ENSFALG00000011728) #32	CYP19A1 (ENSFALG00000011696)	GLDN (ENSFALG00000022861) #33	DMXL2 (ENSFALG00000011669) #34	SEMA6D (ENSFALG00000028246) #36	SLC24A5 (ENSFALG00000011584)	MYEF2 (ENSFALG00000011565)
African ostrich	MODERN SPECIES	834	NEDD4 (ENSSCUG00000014393)	PRTG (ENSSCUG00000014384)	PYGO1 (ENSSCUG00000014379)	PIERCE2 (ENSSCUG00000014377)	DNAAF4 (ENSSCUG00000014375)	CCPG1 (ENSSCUG00000014371)	PIGB (ENSSCUG00000014369)	RAB27A (ENSSCUG00000014367)	RSL24D1 (ENSSCUG00000014366)	UNC13C (ENSSCUG00000014361)	WDR72 (ENSSCUG00000014358)	ONECUT1 (ENSSCUG00000014353)	ATOSA (ENSSCUG00000014350) #19	ARPP19 (ENSSCUG00000014347) #20	MYO5A (ENSSCUG00000014338) #21	MYO5C (ENSSCUG00000014331) #22	GNB5 (ENSSCUG00000014327) #23	MAPK6 (ENSSCUG00000014323) #25	LEO1 (ENSSCUG00000014316) #26	TMOD3 (ENSSCUG00000014313) #27	TMOD2 (ENSSCUG00000014312) #28	LYSMD2 (ENSSCUG00000014310) #29	SCG3 (ENSSCUG00000014309) #30	AP4E1 (ENSSCUG00000014306) #31	TNFAIP8L3 (ENSSCUG00000014305) #32	CYP19A1 (ENSSCUG00000014304)	GLDN (ENSSCUG00000014302) #33	DMXL2 (ENSSCUG00000014298) #34	SEMA6D (ENSSCUG00000014268) #36	SLC24A5 (ENSSCUG00000014631)	MYEF2 (ENSSCUG00000014614)
Cryptodira	ANCESTRAL SPECIES	13	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Three-toed box turtle	MODERN SPECIES	27	PRTG (ENSTMTG00000022916)	PYGO1 (ENSTMTG00000022919)	DNAAF4 (ENSTMTG00000022920)	PIERCE2 (ENSTMTG00000022925)	CCPG1 (ENSTMTG00000022929)	PIGB (ENSTMTG00000022938)	RAB27A (ENSTMTG00000022945)	RSL24D1 (ENSTMTG00000022948)	UNC13C (ENSTMTG00000022955)	WDR72 (ENSTMTG00000022964)	ENSTMTG00000022968	ONECUT1 (ENSTMTG00000022971)	ATOSA (ENSTMTG00000022975) #19	ARPP19 (ENSTMTG00000022979) #20	MYO5A (ENSTMTG00000023003) #21	MYO5C (ENSTMTG00000023036) #22	ENSTMTG00000023040 #23	ENSTMTG00000023042 #23	BCL2L10 (ENSTMTG00000023044) #24	MAPK6 (ENSTMTG00000023045) #25	LEO1 (ENSTMTG00000023047) #26	TMOD3 (ENSTMTG00000023048) #27	TMOD2 (ENSTMTG00000023049) #28	LYSMD2 (ENSTMTG00000023050) #29	SCG3 (ENSTMTG00000023051) #30	AP4E1 (ENSTMTG00000023052) #31	TNFAIP8L3 (ENSTMTG00000023054) #32	CYP19A1 (ENSTMTG00000023055)	GLDN (ENSTMTG00000023056) #33	DMXL2 (ENSTMTG00000023058) #34	ENSTMTG00000000056
Testudinidae	ANCESTRAL SPECIES	3	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Abingdon island giant tortoise	MODERN SPECIES	633				ENSCABG00000011999	IDUA (ENSCABG00000012003)	SLC26A1 (ENSCABG00000012005)	ENSCABG00000012007	PDE6B (ENSCABG00000012009)	ENSCABG00000012010	MYL5 (ENSCABG00000012011)	TMEM175 (ENSCABG00000012012)	ENSCABG00000012013	ATOSA (ENSCABG00000012015) #19	ARPP19 (ENSCABG00000012017) #20	MYO5A (ENSCABG00000012022) #21	MYO5C (ENSCABG00000012060) #22	GNB5 (ENSCABG00000012061) #23	ENSCABG00000012062	MAPK6 (ENSCABG00000012063) #25	LEO1 (ENSCABG00000012064) #26	TMOD3 (ENSCABG00000012066) #27	ENSCABG00000012067	ENSCABG00000012068	TMOD2 (ENSCABG00000012069) #28	LYSMD2 (ENSCABG00000012070) #29	SCG3 (ENSCABG00000012071) #30	AP4E1 (ENSCABG00000012208) #31	TNFAIP8L3 (ENSCABG00000012222) #32	CYP19A1 (ENSCABG00000012227)	GLDN (ENSCABG00000012281) #33	DMXL2 (ENSCABG00000012285) #34
Mammalia	ANCESTRAL SPECIES	68	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00940000175727	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36
Theria	ANCESTRAL SPECIES	22	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Diprotodontia	ANCESTRAL SPECIES		ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Diprotodontia_a	ANCESTRAL SPECIES	1	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
koala	DUPLICATION
koala	DUPLICATION
koala	MODERN SPECIES		PRTG (ENSPCIG00000024927)	PYGO1 (ENSPCIG00000024934)	DNAAF4 (ENSPCIG00000031568)	PIERCE2 (ENSPCIG00000011745)	CCPG1 (ENSPCIG00000011741)	PIGB (ENSPCIG00000011739)	PIGBOS1 (ENSPCIG00000031962)	RAB27A (ENSPCIG00000030883)	RSL24D1 (ENSPCIG00000007604)	ENSPCIG00000035065	WDR72 (ENSPCIG00000004847)	ONECUT1 (ENSPCIG00000004922)	ATOSA (ENSPCIG00000004937) #19	ARPP19 (ENSPCIG00000004971) #20	MYO5A (ENSPCIG00000004992) #21	ENSPCIG00000032047 #22	ENSPCIG00000022661 #22	ENSPCIG00000005128	GNB5 (ENSPCIG00000005132) #23	ENSPCIG00000033786 #24	MAPK6 (ENSPCIG00000005148) #25	LEO1 (ENSPCIG00000005153) #26	TMOD3 (ENSPCIG00000005166) #27	TMOD2 (ENSPCIG00000005194) #28	LYSMD2 (ENSPCIG00000005203) #29	SCG3 (ENSPCIG00000005212) #30	DMXL2 (ENSPCIG00000005228) #34	GLDN (ENSPCIG00000005270) #33	CYP19A1 (ENSPCIG00000005286)	TNFAIP8L3 (ENSPCIG00000005300) #32	AP4E1 (ENSPCIG00000017889) #31
koala	MODERN SPECIES		PYGO1 (ENSPCIG00000024934)	DNAAF4 (ENSPCIG00000031568)	PIERCE2 (ENSPCIG00000011745)	CCPG1 (ENSPCIG00000011741)	PIGB (ENSPCIG00000011739)	PIGBOS1 (ENSPCIG00000031962)	RAB27A (ENSPCIG00000030883)	RSL24D1 (ENSPCIG00000007604)	ENSPCIG00000035065	WDR72 (ENSPCIG00000004847)	ONECUT1 (ENSPCIG00000004922)	ATOSA (ENSPCIG00000004937) #19	ARPP19 (ENSPCIG00000004971) #20	MYO5A (ENSPCIG00000004992) #21	ENSPCIG00000032047 #22	ENSPCIG00000022661 #22	ENSPCIG00000005128	GNB5 (ENSPCIG00000005132) #23	ENSPCIG00000033786 #24	MAPK6 (ENSPCIG00000005148) #25	LEO1 (ENSPCIG00000005153) #26	TMOD3 (ENSPCIG00000005166) #27	TMOD2 (ENSPCIG00000005194) #28	LYSMD2 (ENSPCIG00000005203) #29	SCG3 (ENSPCIG00000005212) #30	DMXL2 (ENSPCIG00000005228) #34	GLDN (ENSPCIG00000005270) #33	CYP19A1 (ENSPCIG00000005286)	TNFAIP8L3 (ENSPCIG00000005300) #32	AP4E1 (ENSPCIG00000017889) #31	SPPL2A (ENSPCIG00000025801)
koala	MODERN SPECIES	652																ENSPCIG00000005089 #22
Common wonbat	MODERN SPECIES	1076	DNAAF4 (ENSVURG00010005294)	PIERCE2 (ENSVURG00010005284)	CCPG1 (ENSVURG00010005273)	PIGB (ENSVURG00010005264)	PIGBOS1 (ENSVURG00010005259)	RAB27A (ENSVURG00010005252)	RSL24D1 (ENSVURG00010005243)	ENSVURG00010005230	ENSVURG00010005221	WDR72 (ENSVURG00010005172)	ENSVURG00010005154	ONECUT1 (ENSVURG00010005151)	ATOSA (ENSVURG00010005134) #19	ARPP19 (ENSVURG00010005108) #20	MYO5A (ENSVURG00010005015) #21	MYO5C (ENSVURG00010004904) #22	ENSVURG00010004885	GNB5 (ENSVURG00010004866) #23	ENSVURG00010004859 #24	MAPK6 (ENSVURG00010004850) #25	LEO1 (ENSVURG00010004832) #26	TMOD3 (ENSVURG00010004794) #27	LYSMD2 (ENSVURG00010004752) #29	SCG3 (ENSVURG00010004741) #30	DMXL2 (ENSVURG00010004688) #34	CYP19A1 (ENSVURG00010004661)	TNFAIP8L3 (ENSVURG00010004650) #32	AP4E1 (ENSVURG00010004641) #31	SPPL2A (ENSVURG00010004585)	TRPM7 (ENSVURG00010004494)	USP50 (ENSVURG00010004429)
Wallaby	MODERN SPECIES	3472																MYO5C (ENSMEUG00000004022) #22
Tasmanian devil	MODERN SPECIES	1	NEDD4 (ENSSHAG00000005132)	ENSSHAG00000006925	PRTG (ENSSHAG00000007825)	PYGO1 (ENSSHAG00000009649)	ENSSHAG00000022406	PIGB (ENSSHAG00000010715)	CCPG1 (ENSSHAG00000010560)	RAB27A (ENSSHAG00000030386)	RSL24D1 (ENSSHAG00000029603)	ENSSHAG00000008022	WDR72 (ENSSHAG00000002915)	ONECUT1 (ENSSHAG00000030716)	ATOSA (ENSSHAG00000017914) #19	ARPP19 (ENSSHAG00000030680) #20	MYO5A (ENSSHAG00000017648) #21	MYO5C (ENSSHAG00000017425) #22	ENSSHAG00000027236 #24	GNB5 (ENSSHAG00000017321) #23	MAPK6 (ENSSHAG00000017091) #25	LEO1 (ENSSHAG00000016879) #26	TMOD3 (ENSSHAG00000016742) #27	LYSMD2 (ENSSHAG00000016545) #29	SCG3 (ENSSHAG00000026438) #30	DMXL2 (ENSSHAG00000015967) #34	GLDN (ENSSHAG00000015668) #33	CYP19A1 (ENSSHAG00000015151)	TNFAIP8L3 (ENSSHAG00000022065) #32	AP4E1 (ENSSHAG00000014210) #31	SPPL2A (ENSSHAG00000013412)	TRPM7 (ENSSHAG00000012617)	USP50 (ENSSHAG00000012441)
Opossum	MODERN SPECIES		AVEN (ENSMODG00000001642)	CHRM5 (ENSMODG00000024252)	EMC7 (ENSMODG00000001647)	KATNBL1 (ENSMODG00000001657)	ENSMODG00000048438	EMC4 (ENSMODG00000001665)	SLC12A6 (ENSMODG00000001725)	ENSMODG00000047045	LPCAT4 (ENSMODG00000001770)	ENSMODG00000001782	WDR72 (ENSMODG00000001796)	ONECUT1 (ENSMODG00000001801)	ATOSA (ENSMODG00000001815) #19	ARPP19 (ENSMODG00000001823) #20	MYO5A (ENSMODG00000001873) #21	MYO5C (ENSMODG00000001912) #22	GNB5 (ENSMODG00000001948) #23	ENSMODG00000001950 #24	ENSMODG00000001962 #25	LEO1 (ENSMODG00000001979) #26	TMOD2 (ENSMODG00000040618) #28	LYSMD2 (ENSMODG00000002007) #29	SCG3 (ENSMODG00000002026) #30	DMXL2 (ENSMODG00000002058) #34	GLDN (ENSMODG00000002073) #33	CYP19A1 (ENSMODG00000002101)	TNFAIP8L3 (ENSMODG00000002109) #32	AP4E1 (ENSMODG00000002130) #31	SPPL2A (ENSMODG00000002148)	TRPM7 (ENSMODG00000002196)	USP50 (ENSMODG00000002207)
Eutheria	ANCESTRAL SPECIES	8	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Atlantogenata	ANCESTRAL SPECIES	2	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00970000193985	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441
Afrotheria	ANCESTRAL SPECIES	155											ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441
Afrotheria_a	ANCESTRAL SPECIES	157											ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441
Elephant	DUPLICATION
Elephant	MODERN SPECIES	603								ENSLAFG00000028400	ENSLAFG00000012960	ENSLAFG00000028906	ENSLAFG00000027243	ATOSA (ENSLAFG00000010429) #19	ARPP19 (ENSLAFG00000000755) #20	MYO5A (ENSLAFG00000000750) #21	ENSLAFG00000015566 #22	ENSLAFG00000029656 #22	GNB5 (ENSLAFG00000001471) #23	ENSLAFG00000032263	ENSLAFG00000028101	MAPK6 (ENSLAFG00000013900) #25	LEO1 (ENSLAFG00000016350) #26	TMOD3 (ENSLAFG00000009017) #27	TMOD2 (ENSLAFG00000012741) #28	LYSMD2 (ENSLAFG00000031664) #29	SCG3 (ENSLAFG00000030777) #30	DMXL2 (ENSLAFG00000016011) #34	GLDN (ENSLAFG00000016003) #33	CYP19A1 (ENSLAFG00000009390)	TNFAIP8L3 (ENSLAFG00000006663) #32	ENSLAFG00000030822	AP4E1 (ENSLAFG00000006452) #31
Elephant	MODERN SPECIES	603									ENSLAFG00000028400	ENSLAFG00000012960	ENSLAFG00000028906	ENSLAFG00000027243	ATOSA (ENSLAFG00000010429) #19	ARPP19 (ENSLAFG00000000755) #20	MYO5A (ENSLAFG00000000750) #21	ENSLAFG00000015566 #22	ENSLAFG00000029656 #22	GNB5 (ENSLAFG00000001471) #23	ENSLAFG00000032263	ENSLAFG00000028101	MAPK6 (ENSLAFG00000013900) #25	LEO1 (ENSLAFG00000016350) #26	TMOD3 (ENSLAFG00000009017) #27	TMOD2 (ENSLAFG00000012741) #28	LYSMD2 (ENSLAFG00000031664) #29	SCG3 (ENSLAFG00000030777) #30	DMXL2 (ENSLAFG00000016011) #34	GLDN (ENSLAFG00000016003) #33	CYP19A1 (ENSLAFG00000009390)	TNFAIP8L3 (ENSLAFG00000006663) #32	ENSLAFG00000030822
Hyrax	MODERN SPECIES	2079																ENSPCAG00000003440 #22
Tenrec	MODERN SPECIES	5645														ARPP19 (ENSETEG00000015550) #20	MYO5A (ENSETEG00000015542) #21	MYO5C (ENSETEG00000015537) #22
Xenarthra	ANCESTRAL SPECIES	631										ENSGT00940000155174.x	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23
Sloth	MODERN SPECIES	2288																MYO5C (ENSCHOG00000000315) #22
Armadillo	MODERN SPECIES	4593										ENSDNOG00000047068	WDR72 (ENSDNOG00000002159)	ONECUT1 (ENSDNOG00000037207)	ATOSA (ENSDNOG00000004475) #19	ARPP19 (ENSDNOG00000035498) #20	MYO5A (ENSDNOG00000016721) #21	MYO5C (ENSDNOG00000016713) #22	GNB5 (ENSDNOG00000003228) #23
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Carnivora	ANCESTRAL SPECIES		ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Caniformia	ANCESTRAL SPECIES	12	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Caniformia_b	ANCESTRAL SPECIES	15	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Ursidae	ANCESTRAL SPECIES	21	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.a #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Ursus	ANCESTRAL SPECIES	73	ENSGT01050000244970.b	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00940000157573 #19	ENSGT00940000154555.a.a #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091.g	ENSGT00940000160441
Polar bear	MODERN SPECIES	282	PRTG (ENSUMAG00000023474)	PYGO1 (ENSUMAG00000023471)	DNAAF4 (ENSUMAG00000023467)	PIERCE2 (ENSUMAG00000023462)	CCPG1 (ENSUMAG00000023459)	PIGB (ENSUMAG00000023451)	RAB27A (ENSUMAG00000023439)	RSL24D1 (ENSUMAG00000023425)	UNC13C (ENSUMAG00000023410)	ENSUMAG00000023407	ENSUMAG00000023405	WDR72 (ENSUMAG00000023398)	ATOSA (ENSUMAG00000023390) #19	ENSUMAG00000023388 #20	MYO5A (ENSUMAG00000020539) #21	MYO5C (ENSUMAG00000019644) #22	GNB5 (ENSUMAG00000019214) #23	MAPK6 (ENSUMAG00000019164) #25	LEO1 (ENSUMAG00000019156) #26	TMOD3 (ENSUMAG00000019150) #27	TMOD2 (ENSUMAG00000019149) #28	LYSMD2 (ENSUMAG00000019144) #29	SCG3 (ENSUMAG00000019142) #30	DMXL2 (ENSUMAG00000017518) #34	GLDN (ENSUMAG00000017168) #33	CYP19A1 (ENSUMAG00000017122)	TNFAIP8L3 (ENSUMAG00000017115) #32	AP4E1 (ENSUMAG00000017041) #31	SPPL2A (ENSUMAG00000016817)	TRPM7 (ENSUMAG00000015380)	USP50 (ENSUMAG00000015191)
American black bear	MODERN SPECIES	4994																ENSUAMG00000019721 #22
Giant Panda	MODERN SPECIES	15	PRTG (ENSAMEG00000018373)	PYGO1 (ENSAMEG00000018374)	DNAAF4 (ENSAMEG00000018375)	PIERCE2 (ENSAMEG00000023945)	CCPG1 (ENSAMEG00000018378)	PIGB (ENSAMEG00000018381)	PIGBOS1 (ENSAMEG00000030426)	RAB27A (ENSAMEG00000023639)	RSL24D1 (ENSAMEG00000023548)	UNC13C (ENSAMEG00000000405)	WDR72 (ENSAMEG00000011751)	ONECUT1 (ENSAMEG00000029093)	ATOSA (ENSAMEG00000007396) #19	ARPP19 (ENSAMEG00000025850) #20	MYO5A (ENSAMEG00000007239) #21	MYO5C (ENSAMEG00000007207) #22	GNB5 (ENSAMEG00000007167) #23	BCL2L10 (ENSAMEG00000031458) #24	MAPK6 (ENSAMEG00000007132) #25	LEO1 (ENSAMEG00000007095) #26	TMOD3 (ENSAMEG00000030744) #27	LYSMD2 (ENSAMEG00000009315) #29	SCG3 (ENSAMEG00000009266) #30	DMXL2 (ENSAMEG00000009193) #34	GLDN (ENSAMEG00000026754) #33	CYP19A1 (ENSAMEG00000009155)	TNFAIP8L3 (ENSAMEG00000019034) #32	AP4E1 (ENSAMEG00000009126) #31	SPPL2A (ENSAMEG00000009085)	TRPM7 (ENSAMEG00000009020)	USP50 (ENSAMEG00000009011)
Mustelinae	ANCESTRAL SPECIES	28											ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Ferret	MODERN SPECIES	210	ENSMPUG00000007466	ENSMPUG00000007471	ENSMPUG00000007477	ENSMPUG00000007481	ENSMPUG00000007485	ENSMPUG00000007489	ENSMPUG00000007496	ENSMPUG00000007503	ENSMPUG00000007509	ENSMPUG00000007516	WDR72 (ENSMPUG00000007521)	ONECUT1 (ENSMPUG00000007536)	ATOSA (ENSMPUG00000007544) #19	ARPP19 (ENSMPUG00000007556) #20	MYO5A (ENSMPUG00000007571) #21	MYO5C (ENSMPUG00000007603) #22	MAPK6 (ENSMPUG00000007628) #25	GNB5 (ENSMPUG00000007634) #23	ENSMPUG00000007643 #24	LEO1 (ENSMPUG00000007648) #26	ENSMPUG00000007660 #26	TMOD3 (ENSMPUG00000007668) #27	TMOD2 (ENSMPUG00000007783) #28	LYSMD2 (ENSMPUG00000007790) #29	SCG3 (ENSMPUG00000007793) #30	DMXL2 (ENSMPUG00000007804) #34	GLDN (ENSMPUG00000007823) #33	CYP19A1 (ENSMPUG00000007830)	TNFAIP8L3 (ENSMPUG00000018890) #32	SPPL2A (ENSMPUG00000007838)	AP4E1 (ENSMPUG00000007850) #31
American mink	MODERN SPECIES	351												ONECUT1 (ENSNVIG00000009116)	ATOSA (ENSNVIG00000009129) #19	ARPP19 (ENSNVIG00000009173) #20	MYO5A (ENSNVIG00000009201) #21	MYO5C (ENSNVIG00000009467) #22	GNB5 (ENSNVIG00000009558) #23	BCL2L10 (ENSNVIG00000009589) #24	MAPK6 (ENSNVIG00000009601) #25	LEO1 (ENSNVIG00000009622) #26	TMOD2 (ENSNVIG00000009671) #27	LYSMD2 (ENSNVIG00000009774) #29	SCG3 (ENSNVIG00000009788) #30	DMXL2 (ENSNVIG00000009852) #34
Canidae	ANCESTRAL SPECIES	15	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00960000190422	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000154268.e.a.hb.a	ENSGT00940000157722	ENSGT00940000157091
Canis_lupus	ANCESTRAL SPECIES	17	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00390000004322.a.b.j.a	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000158012.c.a.b	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000154268.e.a.hb.a	ENSGT00940000157722
Dingo	DUPLICATION
Dingo	MODERN SPECIES	205	PYGO1 (ENSCAFG00020012681)	DNAAF4 (ENSCAFG00020012682)	PIERCE2 (ENSCAFG00020012693)	CCPG1 (ENSCAFG00020012696)	PIGB (ENSCAFG00020012711)	RAB27A (ENSCAFG00020012748)	RSL24D1 (ENSCAFG00020012749)	UNC13C (ENSCAFG00020012791)	WDR72 (ENSCAFG00020012811)	ONECUT1 (ENSCAFG00020012820)	ATOSA (ENSCAFG00020012826) #19	ENSCAFG00020012833	ARPP19 (ENSCAFG00020012836) #20	MYO5A (ENSCAFG00020013142) #21	ENSCAFG00020018731 #22	ENSCAFG00020018842 #22	GNB5 (ENSCAFG00020018956) #23	ENSCAFG00020018967	MAPK6 (ENSCAFG00020018994) #25	LEO1 (ENSCAFG00020018998) #26	TMOD3 (ENSCAFG00020019011) #27	ENSCAFG00020019022	TMOD2 (ENSCAFG00020019033) #28	ENSCAFG00020019036 #29	ENSCAFG00020019039 #29	SCG3 (ENSCAFG00020019040) #30	DMXL2 (ENSCAFG00020019070) #34	GLDN (ENSCAFG00020019134) #33	CYP19A1 (ENSCAFG00020019162)	TNFAIP8L3 (ENSCAFG00020019185) #32	AP4E1 (ENSCAFG00020019190) #31
Dingo	MODERN SPECIES	205	PRTG (ENSCAFG00020012669)	PYGO1 (ENSCAFG00020012681)	DNAAF4 (ENSCAFG00020012682)	PIERCE2 (ENSCAFG00020012693)	CCPG1 (ENSCAFG00020012696)	PIGB (ENSCAFG00020012711)	RAB27A (ENSCAFG00020012748)	RSL24D1 (ENSCAFG00020012749)	UNC13C (ENSCAFG00020012791)	WDR72 (ENSCAFG00020012811)	ONECUT1 (ENSCAFG00020012820)	ATOSA (ENSCAFG00020012826) #19	ENSCAFG00020012833	ARPP19 (ENSCAFG00020012836) #20	MYO5A (ENSCAFG00020013142) #21	ENSCAFG00020018731 #22	ENSCAFG00020018842 #22	GNB5 (ENSCAFG00020018956) #23	ENSCAFG00020018967	MAPK6 (ENSCAFG00020018994) #25	LEO1 (ENSCAFG00020018998) #26	TMOD3 (ENSCAFG00020019011) #27	ENSCAFG00020019022	TMOD2 (ENSCAFG00020019033) #28	ENSCAFG00020019036 #29	ENSCAFG00020019039 #29	SCG3 (ENSCAFG00020019040) #30	DMXL2 (ENSCAFG00020019070) #34	GLDN (ENSCAFG00020019134) #33	CYP19A1 (ENSCAFG00020019162)	TNFAIP8L3 (ENSCAFG00020019185) #32
Dog	MODERN SPECIES	23	PRTG (ENSCAFG00845028953)	PYGO1 (ENSCAFG00845028910)	DNAAF4 (ENSCAFG00845028777)	PIERCE2 (ENSCAFG00845028715)	CCPG1 (ENSCAFG00845028620)	PIGB (ENSCAFG00845028570)	RAB27A (ENSCAFG00845028531)	RSL24D1 (ENSCAFG00845028485)	UNC13C (ENSCAFG00845028243)	WDR72 (ENSCAFG00845028013)	ONECUT1 (ENSCAFG00845027935)	FAM214A (ENSCAFG00845027818) #19	ENSCAFG00845027783	ARPP19 (ENSCAFG00845027754) #20	MYO5A (ENSCAFG00845027428) #21	MYO5C (ENSCAFG00845027198) #22	GNB5 (ENSCAFG00845026999) #23	ENSCAFG00845026960	MAPK6 (ENSCAFG00845026900) #25	LEO1 (ENSCAFG00845026719) #26	TMOD2 (ENSCAFG00845026270) #27	ENSCAFG00845026097 #29	SCG3 (ENSCAFG00845025888) #30	DMXL2 (ENSCAFG00845025245) #34	GLDN (ENSCAFG00845025056) #33	CYP19A1 (ENSCAFG00845024965)	TNFAIP8L3 (ENSCAFG00845024928) #32	AP4E1 (ENSCAFG00845024763) #31	ENSCAFG00845024711	SPPL2A (ENSCAFG00845024415)	TRPM7 (ENSCAFG00845024080)
Red fox	MODERN SPECIES		DNAAF4 (ENSVVUG00000000666)	ENSVVUG00000000655	CCPG1 (ENSVVUG00000000630)	PIGB (ENSVVUG00000000616)	RAB27A (ENSVVUG00000000413)	RSL24D1 (ENSVVUG00000000235)	UNC13C (ENSVVUG00000000196)	WDR72 (ENSVVUG00000000068)	ENSVVUG00000000027	ONECUT1 (ENSVVUG00000000018)	FAM214A (ENSVVUG00000000015) #19	ENSVVUG00000000014	ENSVVUG00000000013 #20	ENSVVUG00000000012	MYO5A (ENSVVUG00000000011) #21	MYO5C (ENSVVUG00000000010) #22	GNB5 (ENSVVUG00000000009) #23	ENSVVUG00000000008	MAPK6 (ENSVVUG00000000007) #25	LEO1 (ENSVVUG00000000006) #26	TMOD3 (ENSVVUG00000000005) #27	TMOD2 (ENSVVUG00000000004) #28	LYSMD2 (ENSVVUG00000000003) #29	SCG3 (ENSVVUG00000000002) #30
Felidae	ANCESTRAL SPECIES	1	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Panthera	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Panthera_a	ANCESTRAL SPECIES	15	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
leopard	MODERN SPECIES	7	CCPG1 (ENSPPRG00000023996)	PIGB (ENSPPRG00000021881)	PIGBOS1 (ENSPPRG00000021706)	RAB27A (ENSPPRG00000016973)	RSL24D1 (ENSPPRG00000016099)	UNC13C (ENSPPRG00000015908)	ENSPPRG00000014802	ENSPPRG00000014379	ENSPPRG00000014219	WDR72 (ENSPPRG00000014044)	ENSPPRG00000012958	ONECUT1 (ENSPPRG00000012763)	ATOSA (ENSPPRG00000012601) #19	ARPP19 (ENSPPRG00000012174) #20	MYO5A (ENSPPRG00000011516) #21	MYO5C (ENSPPRG00000006514) #22	GNB5 (ENSPPRG00000005761) #23	ENSPPRG00000005523	MAPK6 (ENSPPRG00000005399) #25	LEO1 (ENSPPRG00000005234) #26	TMOD3 (ENSPPRG00000004938) #27	TMOD2 (ENSPPRG00000004583) #28	LYSMD2 (ENSPPRG00000004327) #29	SCG3 (ENSPPRG00000004290) #30	DMXL2 (ENSPPRG00000004050) #34	GLDN (ENSPPRG00000002808) #33	CYP19A1 (ENSPPRG00000002648)	TNFAIP8L3 (ENSPPRG00000002310) #32	AP4E1 (ENSPPRG00000002161) #31	SPPL2A (ENSPPRG00000002067)	TRPM7 (ENSPPRG00000001988)
lion	MODERN SPECIES	6	PRTG (ENSPLOG00000001890)	PYGO1 (ENSPLOG00000002006)	DNAAF4 (ENSPLOG00000002038)	PIERCE2 (ENSPLOG00000002061)	CCPG1 (ENSPLOG00000002113)	PIGB (ENSPLOG00000002176)	RAB27A (ENSPLOG00000002213)	RSL24D1 (ENSPLOG00000002280)	UNC13C (ENSPLOG00000002354)	ENSPLOG00000002508	WDR72 (ENSPLOG00000002556)	ONECUT1 (ENSPLOG00000002617)	ATOSA (ENSPLOG00000002641) #19	ARPP19 (ENSPLOG00000002678) #20	MYO5A (ENSPLOG00000003030) #21	MYO5C (ENSPLOG00000003396) #22	GNB5 (ENSPLOG00000003456) #23	BCL2L10 (ENSPLOG00000003483) #24	MAPK6 (ENSPLOG00000003501) #25	LEO1 (ENSPLOG00000003553) #26	TMOD3 (ENSPLOG00000003671) #27	TMOD2 (ENSPLOG00000003769) #28	LYSMD2 (ENSPLOG00000003797) #29	SCG3 (ENSPLOG00000003820) #30	DMXL2 (ENSPLOG00000003858) #34	GLDN (ENSPLOG00000003902) #33	CYP19A1 (ENSPLOG00000003924)	TNFAIP8L3 (ENSPLOG00000003984) #32	AP4E1 (ENSPLOG00000003996) #31	SPPL2A (ENSPLOG00000004068)	TRPM7 (ENSPLOG00000004113)
Tiger	MODERN SPECIES	164	PRTG (ENSPTIG00000018291)	PYGO1 (ENSPTIG00000018220)	DNAAF4 (ENSPTIG00000017849)	PIERCE2 (ENSPTIG00000017709)	CCPG1 (ENSPTIG00000016812)	PIGB (ENSPTIG00000016452)	PIGBOS1 (ENSPTIG00000010465)	RAB27A (ENSPTIG00000016112)	RSL24D1 (ENSPTIG00000015727)	UNC13C (ENSPTIG00000014815)	WDR72 (ENSPTIG00000014302)	ENSPTIG00000014284	ATOSA (ENSPTIG00000013606) #19	ARPP19 (ENSPTIG00000012958) #20	MYO5A (ENSPTIG00000010474) #21	MYO5C (ENSPTIG00000010073) #22	GNB5 (ENSPTIG00000009677) #23	MAPK6 (ENSPTIG00000009477) #25	LEO1 (ENSPTIG00000009225) #26	TMOD3 (ENSPTIG00000008932) #27	TMOD2 (ENSPTIG00000008872) #28	LYSMD2 (ENSPTIG00000008775) #29	SCG3 (ENSPTIG00000008694) #30	DMXL2 (ENSPTIG00000007927) #34	GLDN (ENSPTIG00000007531) #33	CYP19A1 (ENSPTIG00000007208)	TNFAIP8L3 (ENSPTIG00000007180) #32	AP4E1 (ENSPTIG00000006634) #31	SPPL2A (ENSPTIG00000006401)	TRPM7 (ENSPTIG00000005333)	USP50 (ENSPTIG00000005189)
Cat	MODERN SPECIES	237	PRTG (ENSFCAG00000013524)	PYGO1 (ENSFCAG00000011165)	DNAAF4 (ENSFCAG00000029550)	PIERCE2 (ENSFCAG00000036319)	CCPG1 (ENSFCAG00000003265)	PIGB (ENSFCAG00000031267)	RAB27A (ENSFCAG00000042960)	RSL24D1 (ENSFCAG00000034397)	UNC13C (ENSFCAG00000022273)	WDR72 (ENSFCAG00000011842)	ENSFCAG00000033689	ONECUT1 (ENSFCAG00000004348)	ATOSA (ENSFCAG00000004347) #19	ARPP19 (ENSFCAG00000036136) #20	MYO5A (ENSFCAG00000012577) #21	MYO5C (ENSFCAG00000012574) #22	GNB5 (ENSFCAG00000012572) #23	BCL2L10 (ENSFCAG00000040864) #24	MAPK6 (ENSFCAG00000012570) #25	LEO1 (ENSFCAG00000025417) #26	TMOD3 (ENSFCAG00000012569) #27	LYSMD2 (ENSFCAG00000028252) #29	SCG3 (ENSFCAG00000012567) #30	DMXL2 (ENSFCAG00000028210) #34	GLDN (ENSFCAG00000010317) #33	CYP19A1 (ENSFCAG00000023859)	TNFAIP8L3 (ENSFCAG00000032180) #32	AP4E1 (ENSFCAG00000010314) #31	SPPL2A (ENSFCAG00000023141)	TRPM7 (ENSFCAG00000024588)	USP50 (ENSFCAG00000008601)
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Equus	ANCESTRAL SPECIES	4	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00390000007479.y.a	ENSGT00940000157722
Horse	MODERN SPECIES		ENSECAG00000052784	PYGO1 (ENSECAG00000010191)	DNAAF4 (ENSECAG00000010951)	ENSECAG00000052545	ENSECAG00000036510	ENSECAG00000028877	CCPG1 (ENSECAG00000017205)	PIGB (ENSECAG00000001013)	RAB27A (ENSECAG00000010394)	ENSECAG00000044040	UNC13C (ENSECAG00000022427)	WDR72 (ENSECAG00000007366)	ONECUT1 (ENSECAG00000011997)	ATOSA (ENSECAG00000013839) #19	MYO5A (ENSECAG00000021742) #21	MYO5C (ENSECAG00000057507) #22	GNB5 (ENSECAG00000042921) #23	ENSECAG00000026995 #24	MAPK6 (ENSECAG00000034988) #25	LEO1 (ENSECAG00000014898) #26	TMOD3 (ENSECAG00000021291) #27	TMOD2 (ENSECAG00000013328) #28	LYSMD2 (ENSECAG00000016259) #29	SCG3 (ENSECAG00000016522) #30	DMXL2 (ENSECAG00000000381) #34	GLDN (ENSECAG00000019919) #33	CYP19A1 (ENSECAG00000020474)	TNFAIP8L3 (ENSECAG00000004768) #32	AP4E1 (ENSECAG00000022163) #31	ENSECAG00000031753	SPPL2A (ENSECAG00000008167)
Donkey	MODERN SPECIES	11	DNAAF4 (ENSEASG00005009799)	ENSEASG00005031272	ENSEASG00005027098	PIERCE2 (ENSEASG00005028334)	CCPG1 (ENSEASG00005009809)	PIGB (ENSEASG00005009821)	ENSEASG00005033219	RAB27A (ENSEASG00005009827)	RSL24D1 (ENSEASG00005009830)	UNC13C (ENSEASG00005009853)	WDR72 (ENSEASG00005009966)	ONECUT1 (ENSEASG00005009971)	ATOSA (ENSEASG00005009973) #19	ARPP19 (ENSEASG00005037194) #20	MYO5A (ENSEASG00005009982) #21	MYO5C (ENSEASG00005009989) #22	GNB5 (ENSEASG00005009995) #23	ENSEASG00005009997	MAPK6 (ENSEASG00005010000) #25	ENSEASG00005036445	LEO1 (ENSEASG00005010002) #26	TMOD3 (ENSEASG00005010006) #27	TMOD2 (ENSEASG00005010009) #28	ENSEASG00005010012 #29	SCG3 (ENSEASG00005010013) #30	DMXL2 (ENSEASG00005010302) #34	GLDN (ENSEASG00005014538) #33	CYP19A1 (ENSEASG00005014547)	TNFAIP8L3 (ENSEASG00005033995) #32	AP4E1 (ENSEASG00005014560) #31	ENSEASG00005014582
Chiroptera	ANCESTRAL SPECIES	17	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Microchiroptera	ANCESTRAL SPECIES	20	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Greater horseshoe bat	MODERN SPECIES	24	DNAAF4 (ENSRFEG00010017472)	PIERCE2 (ENSRFEG00010017771)	CCPG1 (ENSRFEG00010017828)	PIGB (ENSRFEG00010017955)	RAB27A (ENSRFEG00010017986)	ENSRFEG00010018018	ENSRFEG00010018069	ENSRFEG00010018108	ENSRFEG00010018124	UNC13C (ENSRFEG00010018139)	WDR72 (ENSRFEG00010018247)	ONECUT1 (ENSRFEG00010000244)	ATOSA (ENSRFEG00010000286) #19	ARPP19 (ENSRFEG00010000372) #20	MYO5A (ENSRFEG00010000520) #21	MYO5C (ENSRFEG00010000641) #22	GNB5 (ENSRFEG00010000689) #23	ENSRFEG00010000747	MAPK6 (ENSRFEG00010000757) #25	LEO1 (ENSRFEG00010000806) #26	TMOD3 (ENSRFEG00010000877) #27	TMOD2 (ENSRFEG00010000911) #28	LYSMD2 (ENSRFEG00010000952) #29	SCG3 (ENSRFEG00010000990) #30	DMXL2 (ENSRFEG00010001047) #34	GLDN (ENSRFEG00010001263) #33	CYP19A1 (ENSRFEG00010001310)	TNFAIP8L3 (ENSRFEG00010001350) #32	AP4E1 (ENSRFEG00010001391) #31	SPPL2A (ENSRFEG00010001466)	TRPM7 (ENSRFEG00010001550)
Microbat	MODERN SPECIES	960	PRTG (ENSMLUG00000006308)	PYGO1 (ENSMLUG00000006301)	DNAAF4 (ENSMLUG00000029069)	CCPG1 (ENSMLUG00000009218)	PIGB (ENSMLUG00000009162)	ENSMLUG00000022472	RAB27A (ENSMLUG00000009147)	RSL24D1 (ENSMLUG00000011976)	UNC13C (ENSMLUG00000002661)	WDR72 (ENSMLUG00000010979)	ONECUT1 (ENSMLUG00000012808)	ENSMLUG00000023460	ATOSA (ENSMLUG00000014562) #19	ARPP19 (ENSMLUG00000014560) #20	MYO5A (ENSMLUG00000006954) #21	MYO5C (ENSMLUG00000006904) #22	GNB5 (ENSMLUG00000006877) #23	ENSMLUG00000014915	MAPK6 (ENSMLUG00000000823) #25	LEO1 (ENSMLUG00000003978) #26	TMOD3 (ENSMLUG00000003974) #27	ENSMLUG00000003967 #28	ENSMLUG00000003963 #29	SCG3 (ENSMLUG00000003959) #30	DMXL2 (ENSMLUG00000005617) #34	GLDN (ENSMLUG00000009874) #33	CYP19A1 (ENSMLUG00000009854)	TNFAIP8L3 (ENSMLUG00000009833) #32	AP4E1 (ENSMLUG00000009792) #31	SPPL2A (ENSMLUG00000016737)	TRPM7 (ENSMLUG00000000187)
Megabat	MODERN SPECIES	2244													ATOSA (ENSPVAG00000004013) #19	ARPP19 (ENSPVAG00000004012) #20	MYO5A (ENSPVAG00000004006) #21	MYO5C (ENSPVAG00000003995) #22	GNB5 (ENSPVAG00000003991) #23
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Suina	ANCESTRAL SPECIES	12	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.e	ENSGT00840000129915.f.a	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722
Pig	MODERN SPECIES		CCPG1 (ENSSSCG00000004610)	PIGB (ENSSSCG00000032619)	PIGBOS1 (ENSSSCG00000059295)	RAB27A (ENSSSCG00000004612)	RSL24D1 (ENSSSCG00000024983)	ENSSSCG00000058800	ENSSSCG00000059207	UNC13C (ENSSSCG00000004614)	WDR72 (ENSSSCG00000004615)	ENSSSCG00000041333	ONECUT1 (ENSSSCG00000004616)	ATOSA (ENSSSCG00000004617) #19	ARPP19 (ENSSSCG00000053937) #20	MYO5A (ENSSSCG00000004620) #21	ENSSSCG00000048649	MYO5C (ENSSSCG00000004621) #22	GNB5 (ENSSSCG00000004622) #23	ENSSSCG00000004623 #24	MAPK6 (ENSSSCG00000004624) #25	LEO1 (ENSSSCG00000004625) #26	TMOD3 (ENSSSCG00000004626) #27	TMOD2 (ENSSSCG00000004628) #28	LYSMD2 (ENSSSCG00000004629) #29	SCG3 (ENSSSCG00000004630) #30	DMXL2 (ENSSSCG00000032517) #34	ENSSSCG00000039810	GLDN (ENSSSCG00000004632) #33	ENSSSCG00000030168	CYP19A1 (ENSSSCG00000053670)	ENSSSCG00000054479	TNFAIP8L3 (ENSSSCG00000031794) #32
Chacoan peccary	MODERN SPECIES	162	PYGO1 (ENSCWAG00000019372)	DNAAF4 (ENSCWAG00000019267)	PIERCE2 (ENSCWAG00000019245)	CCPG1 (ENSCWAG00000019209)	PIGB (ENSCWAG00000019191)	PIGBOS1 (ENSCWAG00000019184)	RAB27A (ENSCWAG00000019162)	RSL24D1 (ENSCWAG00000019134)	UNC13C (ENSCWAG00000018867)	WDR72 (ENSCWAG00000018498)	ONECUT1 (ENSCWAG00000018455)	ATOSA (ENSCWAG00000018365) #19	ARPP19 (ENSCWAG00000018328) #20	ENSCWAG00000018309	MYO5A (ENSCWAG00000018093) #21	MYO5C (ENSCWAG00000017808) #22	GNB5 (ENSCWAG00000017624) #23	MAPK6 (ENSCWAG00000017568) #25	LEO1 (ENSCWAG00000017512) #26	TMOD3 (ENSCWAG00000017437) #27	TMOD2 (ENSCWAG00000017285) #28	LYSMD2 (ENSCWAG00000017224) #29	SCG3 (ENSCWAG00000017178) #30	DMXL2 (ENSCWAG00000016348) #34	GLDN (ENSCWAG00000016239) #33	ENSCWAG00000016194	ENSCWAG00000016133	TNFAIP8L3 (ENSCWAG00000016092) #32	AP4E1 (ENSCWAG00000015944) #31	SPPL2A (ENSCWAG00000015851)	TRPM7 (ENSCWAG00000015732)
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.g	ENSGT00840000129915.h.b	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.g	ENSGT00840000129915.h.b	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.g	ENSGT00840000129915.h.b	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.g	ENSGT00840000129915.h.b	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722
Monodontidae	ANCESTRAL SPECIES	27	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00390000018397.e.b.a.b	ENSGT00530000063282.pb.b	ENSGT00390000018397.e.b.b.b
Narwhal	MODERN SPECIES	308	PYGO1 (ENSMMNG00015008220)	DNAAF4 (ENSMMNG00015008183)	PIERCE2 (ENSMMNG00015008158)	CCPG1 (ENSMMNG00015008124)	PIGB (ENSMMNG00015008100)	PIGBOS1 (ENSMMNG00015008080)	RAB27A (ENSMMNG00015008060)	RSL24D1 (ENSMMNG00015008035)	UNC13C (ENSMMNG00015007908)	WDR72 (ENSMMNG00015007775)	ENSMMNG00015007751	ONECUT1 (ENSMMNG00015007739)	ATOSA (ENSMMNG00015007708) #19	ARPP19 (ENSMMNG00015012183) #20	MYO5A (ENSMMNG00015012116) #21	MYO5C (ENSMMNG00015012065) #22	GNB5 (ENSMMNG00015012005) #23	ENSMMNG00015011949 #25	LEO1 (ENSMMNG00015011924) #26	ENSMMNG00015011900	TMOD3 (ENSMMNG00015011880) #27	TMOD2 (ENSMMNG00015011849) #28	LYSMD2 (ENSMMNG00015011833) #29	SCG3 (ENSMMNG00015011814) #30	DMXL2 (ENSMMNG00015011788) #34	ENSMMNG00015011744	ENSMMNG00015011717	NDN (ENSMMNG00015011707)	ENSMMNG00015011700	ENSMMNG00015011691	ENSMMNG00015011671
Beluga whale	MODERN SPECIES	20	NEDD4 (ENSDLEG00000011206)	PRTG (ENSDLEG00000011067)	PYGO1 (ENSDLEG00000011055)	DNAAF4 (ENSDLEG00000011045)	PIERCE2 (ENSDLEG00000011036)	PIGB (ENSDLEG00000010992)	CCPG1 (ENSDLEG00000010886)	RAB27A (ENSDLEG00000010854)	RSL24D1 (ENSDLEG00000010837)	UNC13C (ENSDLEG00000010608)	WDR72 (ENSDLEG00000010477)	ONECUT1 (ENSDLEG00000010411)	ATOSA (ENSDLEG00000010332) #19	ARPP19 (ENSDLEG00000010309) #20	MYO5A (ENSDLEG00000005218) #21	MYO5C (ENSDLEG00000004499) #22	GNB5 (ENSDLEG00000004422) #23	ENSDLEG00000004413	MAPK6 (ENSDLEG00000004404) #25	LEO1 (ENSDLEG00000004379) #26	TMOD3 (ENSDLEG00000004356) #27	TMOD2 (ENSDLEG00000004344) #28	LYSMD2 (ENSDLEG00000004334) #29	SCG3 (ENSDLEG00000004315) #30	DMXL2 (ENSDLEG00000004166) #34	ENSDLEG00000004142
Vaquita	MODERN SPECIES	11	PRTG (ENSPSNG00000002846)	PYGO1 (ENSPSNG00000002880)	DNAAF4 (ENSPSNG00000002904)	PIERCE2 (ENSPSNG00000002922)	CCPG1 (ENSPSNG00000002957)	PIGB (ENSPSNG00000003010)	RAB27A (ENSPSNG00000003049)	RSL24D1 (ENSPSNG00000003069)	UNC13C (ENSPSNG00000003141)	ENSPSNG00000003234	WDR72 (ENSPSNG00000003276)	ONECUT1 (ENSPSNG00000003344)	ATOSA (ENSPSNG00000003379) #19	ENSPSNG00000003405 #20	MYO5A (ENSPSNG00000003460) #21	MYO5C (ENSPSNG00000003533) #22	GNB5 (ENSPSNG00000003621) #23	ENSPSNG00000003686 #25	LEO1 (ENSPSNG00000003717) #26	TMOD3 (ENSPSNG00000003751) #27	TMOD2 (ENSPSNG00000003788) #28	LYSMD2 (ENSPSNG00000003810) #29	SCG3 (ENSPSNG00000003829) #30	DMXL2 (ENSPSNG00000003848) #34	GLDN (ENSPSNG00000003891) #33	ENSPSNG00000003906	ENSPSNG00000003922	ENSPSNG00000003950	TNFAIP8L3 (ENSPSNG00000000040) #32	AP4E1 (ENSPSNG00000000121) #31	SPPL2A (ENSPSNG00000000157)
Dolphin	MODERN SPECIES	570													ATOSA (ENSTTRG00000004805) #19	ARPP19 (ENSTTRG00000004804) #20	MYO5A (ENSTTRG00000004770) #21	MYO5C (ENSTTRG00000004710) #22	GNB5 (ENSTTRG00000004658) #23	ENSTTRG00000004637
Sperm whale	MODERN SPECIES	2	PYGO1 (ENSPCTG00005004001)	DNAAF4 (ENSPCTG00005003984)	ENSPCTG00005003967	CCPG1 (ENSPCTG00005003939)	PIGB (ENSPCTG00005003912)	PIGBOS1 (ENSPCTG00005003898)	RAB27A (ENSPCTG00005003889)	RSL24D1 (ENSPCTG00005003879)	ENSPCTG00005003866	UNC13C (ENSPCTG00005003774)	WDR72 (ENSPCTG00005003691)	ONECUT1 (ENSPCTG00005003662)	FAM214A (ENSPCTG00005003629) #19	ENSPCTG00005003611	ARPP19 (ENSPCTG00005003311) #21	MYO5C (ENSPCTG00005003182) #22	GNB5 (ENSPCTG00005003132) #23	ENSPCTG00005003075 #25	LEO1 (ENSPCTG00005003053) #26	TMOD2 (ENSPCTG00005002994) #27	LYSMD2 (ENSPCTG00005002952) #29	SCG3 (ENSPCTG00005002935) #30	ENSPCTG00005002926	DMXL2 (ENSPCTG00005002810) #34	ENSPCTG00005002760	HAPLN3 (ENSPCTG00005002744)	MFGE8 (ENSPCTG00005002670)	ABHD2 (ENSPCTG00005002623)	RLBP1 (ENSPCTG00005002599)	FANCI (ENSPCTG00005002443)	POLG (ENSPCTG00005002329)
Blue whale	MODERN SPECIES	11	CCPG1 (ENSBMSG00010003354)	PIGB (ENSBMSG00010003389)	ENSBMSG00010003401	PIGBOS1 (ENSBMSG00010003409)	RAB27A (ENSBMSG00010003416)	ENSBMSG00010003426	UNC13C (ENSBMSG00010003454)	ENSBMSG00010003580	WDR72 (ENSBMSG00010003589)	ONECUT1 (ENSBMSG00010003664)	ENSBMSG00010003671	ATOSA (ENSBMSG00010003683) #19	ENSBMSG00010003708 #20	ENSBMSG00010003723	MYO5A (ENSBMSG00010003804) #21	MYO5C (ENSBMSG00010004347) #22	GNB5 (ENSBMSG00010004454) #23	GLDN (ENSBMSG00010004518) #33	ENSBMSG00010004570	ENSBMSG00010004614	ENSBMSG00010004634	ENSBMSG00010004647	ENSBMSG00010004669	TNFAIP8L3 (ENSBMSG00010004677) #32	AP4E1 (ENSBMSG00010004683) #31	SPPL2A (ENSBMSG00010004699)	TRPM7 (ENSBMSG00010004784)	USP50 (ENSBMSG00010004807)	ENSBMSG00010004816	USP8 (ENSBMSG00010004840)	ENSBMSG00010004870
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Caprinae	ANCESTRAL SPECIES	11	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00840000129915.i	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Rambouillet Sheep	MODERN SPECIES	23	C15orf65 (ENSOARG00020024376)	CCPG1 (ENSOARG00020024398)	PIGB (ENSOARG00020024539)	PIGBOS1 (ENSOARG00020024563)	RAB27A (ENSOARG00020024569)	RSL24D1 (ENSOARG00020024588)	ENSOARG00020024607	ENSOARG00020024618	ENSOARG00020024632	UNC13C (ENSOARG00020024653)	WDR72 (ENSOARG00020024704)	ONECUT1 (ENSOARG00020024739)	ATOSA (ENSOARG00020024761) #19	ENSOARG00020024897 #20	MYO5A (ENSOARG00020025016) #21	MYO5C (ENSOARG00020025647) #22	GNB5 (ENSOARG00020025683) #23	MAPK6 (ENSOARG00020025695) #25	LEO1 (ENSOARG00020025700) #26	TMOD3 (ENSOARG00020025709) #27	TMOD2 (ENSOARG00020025714) #28	LYSMD2 (ENSOARG00020025732) #29	SCG3 (ENSOARG00020025738) #30	DMXL2 (ENSOARG00020025748) #34	GLDN (ENSOARG00020025773) #33	CYP19 (ENSOARG00020025784)	ENSOARG00020025789	TNFAIP8L3 (ENSOARG00020025791) #32	AP4E1 (ENSOARG00020025796) #31	SPPL2A (ENSOARG00020003032)	TRPM7 (ENSOARG00020003229)
Goat	MODERN SPECIES	1	NEDD4 (ENSCHIG00000017824)	PRTG (ENSCHIG00000014891)	PYGO1 (ENSCHIG00000024969)	DNAAF4 (ENSCHIG00000016814)	PIERCE2 (ENSCHIG00000019137)	CCPG1 (ENSCHIG00000024802)	PIGB (ENSCHIG00000018932)	RAB27A (ENSCHIG00000007718)	RSL24D1 (ENSCHIG00000016405)	ENSCHIG00000013181	WDR72 (ENSCHIG00000010513)	ONECUT1 (ENSCHIG00000018295)	ATOSA (ENSCHIG00000010470) #19	ENSCHIG00000017275 #20	MYO5A (ENSCHIG00000020656) #21	MYO5C (ENSCHIG00000019938) #22	ENSCHIG00000024417 #23	MAPK6 (ENSCHIG00000026384) #25	LEO1 (ENSCHIG00000014277) #26	TMOD3 (ENSCHIG00000021290) #27	TMOD2 (ENSCHIG00000023304) #28	LYSMD2 (ENSCHIG00000010565) #29	SCG3 (ENSCHIG00000025094) #30	DMXL2 (ENSCHIG00000012762) #34	GLDN (ENSCHIG00000025761) #33	CYP19A1 (ENSCHIG00000019108)	ENSCHIG00000019271	TNFAIP8L3 (ENSCHIG00000022861) #32	AP4E1 (ENSCHIG00000013640) #31	SPPL2A (ENSCHIG00000020318)	TRPM7 (ENSCHIG00000012697)
Bovinae	ANCESTRAL SPECIES	11	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218.b	ENSGT00940000156218.a	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Bos	DUPLICATION
Bos	DUPLICATION
Bos	ANCESTRAL SPECIES	13	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218.b	ENSGT00940000156218.a	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971.m.a #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000159191	ENSGT00940000153875.d.b	ENSGT00530000063884.b	ENSGT00940000156218.b	ENSGT00940000156218.a	ENSGT00950000183105.B.b	ENSGT00940000155174.fb	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971.m.a #22	ENSGT00940000157971.n #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32
Wild yak	MODERN SPECIES	2478												ONECUT1 (ENSBMUG00000024702)	ATOSA (ENSBMUG00000024733) #19	ENSBMUG00000024751 #20	MYO5A (ENSBMUG00000024863) #21	ENSBMUG00000024902 #22
Bos_b	ANCESTRAL SPECIES	11	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218.a	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971.m.a #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32
Cow	MODERN SPECIES	1	ENSBTAG00000031396 ##24	PRTG (ENSBTAG00000005848)	PYGO1 (ENSBTAG00000009151)	DNAAF4 (ENSBTAG00000031388)	PIERCE2 (ENSBTAG00000051675)	CCPG1 (ENSBTAG00000012741)	PIGB (ENSBTAG00000012740)	RAB27A (ENSBTAG00000012408)	RSL24D1 (ENSBTAG00000001342)	UNC13C (ENSBTAG00000025522)	WDR72 (ENSBTAG00000021876)	ONECUT1 (ENSBTAG00000046470)	ATOSA (ENSBTAG00000024958) #19	ARPP19 (ENSBTAG00000011022) #20	MYO5A (ENSBTAG00000006489) #21	MYO5C (ENSBTAG00000003763) #22	GNB5 (ENSBTAG00000003762) #23	ENSBTAG00000005429	MAPK6 (ENSBTAG00000005865) #25	LEO1 (ENSBTAG00000013830) #26	ENSBTAG00000051260	TMOD3 (ENSBTAG00000048622) #27	TMOD2 (ENSBTAG00000014011) #28	LYSMD2 (ENSBTAG00000017683) #29	SCG3 (ENSBTAG00000017677) #30	ENSBTAG00000050593	DMXL2 (ENSBTAG00000000737) #34	GLDN (ENSBTAG00000002576) #33	CYP19A1 (ENSBTAG00000014890)	TNFAIP8L3 (ENSBTAG00000010472) #32	AP4E1 (ENSBTAG00000013616) #31
Hybrid Bos Indicus	MODERN SPECIES	1	ENSBIXG00005017728 ##24	PRTG (ENSBIXG00005017699)	ENSBIXG00005017681	DNAAF4 (ENSBIXG00005017633)	PIERCE2 (ENSBIXG00005017539)	CCPG1 (ENSBIXG00005017475)	PIGB (ENSBIXG00005006358)	PIGBOS1 (ENSBIXG00005017348)	RSL24D1 (ENSBIXG00005017326)	UNC13C (ENSBIXG00005017235)	WDR72 (ENSBIXG00005017181)	ONECUT1 (ENSBIXG00005002781)	ATOSA (ENSBIXG00005017066) #19	ENSBIXG00005016958 #20	MYO5A (ENSBIXG00005016849) #21	MYO5C (ENSBIXG00005016698) #22	GNB5 (ENSBIXG00005002690) #23	ENSBIXG00005016586 #24	MAPK6 (ENSBIXG00005016559) #25	LEO1 (ENSBIXG00005016513) #26	ENSBIXG00005016464	TMOD3 (ENSBIXG00005016450) #27	TMOD2 (ENSBIXG00005016409) #28	LYSMD2 (ENSBIXG00005016362) #29	SCG3 (ENSBIXG00005016339) #30	DMXL2 (ENSBIXG00005016290) #34	GLDN (ENSBIXG00005002586) #33	CYP19A1 (ENSBIXG00005002570)	TNFAIP8L3 (ENSBIXG00005007460) #32	AP4E1 (ENSBIXG00005016092) #31	ENSBIXG00005002557
Bos	ANCESTRAL SPECIES																	ENSGT00940000157971.m.b #22
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000157971.m.b #22
Wild yak	MODERN SPECIES	1176																ENSBMUG00000010111 #22	GNB5 (ENSBMUG00000010128) #23	BCL2L10 (ENSBMUG00000010134) #24	MAPK6 (ENSBMUG00000010171) #25	LEO1 (ENSBMUG00000010199) #26	TMOD3 (ENSBMUG00000010230) #27	TMOD2 (ENSBMUG00000010278) #28	LYSMD2 (ENSBMUG00000010294) #29	SCG3 (ENSBMUG00000010332) #30	ENSBMUG00000010348	DMXL2 (ENSBMUG00000010452) #34	GLDN (ENSBMUG00000010526) #33	CYP19A1 (ENSBMUG00000010546)	TNFAIP8L3 (ENSBMUG00000010626) #32	AP4E1 (ENSBMUG00000010697) #31	SPPL2A (ENSBMUG00000010751)
Bos	ANCESTRAL SPECIES																	ENSGT00940000157971.n #22
Bos_a	ANCESTRAL SPECIES	1	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000159191	ENSGT00940000153875.d.b	ENSGT00530000063884.b	ENSGT00940000156218.b	ENSGT00940000156218.a	ENSGT00950000183105.B.b	ENSGT00940000155174.fb	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.b.b.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971.m.a #22	ENSGT00940000157971.n #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915.j	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31
Domestic yak	MODERN SPECIES	2	DNAAF4 (ENSBGRG00000015774)	PIERCE2 (ENSBGRG00000016198)	CCPG1 (ENSBGRG00000016245)	PIGB (ENSBGRG00000016535)	PIGBOS1 (ENSBGRG00000016687)	ENSBGRG00000016711	RSL24D1 (ENSBGRG00000016747)	ENSBGRG00000016834	UNC13C (ENSBGRG00000016886)	WDR72 (ENSBGRG00000017213)	ONECUT1 (ENSBGRG00000017359)	ATOSA (ENSBGRG00000017394) #19	ENSBGRG00000017680 #20	MYO5A (ENSBGRG00000017940) #21	ENSBGRG00000020468	MYO5C (ENSBGRG00000020503) #22	ENSBGRG00000020778 #23	ENSBGRG00000021154	MAPK6 (ENSBGRG00000008158) #25	ENSBGRG00000008218	LEO1 (ENSBGRG00000008280) #26	ENSBGRG00000008688	TMOD3 (ENSBGRG00000008702) #27	TMOD2 (ENSBGRG00000008774) #28	LYSMD2 (ENSBGRG00000008885) #29	ENSBGRG00000008931	SCG3 (ENSBGRG00000008958) #30	DMXL2 (ENSBGRG00000009228) #34	GLDN (ENSBGRG00000009477) #33	ENSBGRG00000009541	TNFAIP8L3 (ENSBGRG00000009620) #32
American bison	MODERN SPECIES	3000	PRTG (ENSBBBG00000001204)	PYGO1 (ENSBBBG00000001176)	DNAAF4 (ENSBBBG00000001110)	PIERCE2 (ENSBBBG00000001102)	CCPG1 (ENSBBBG00000001012)	PIGB (ENSBBBG00000000978)	PIGBOS1 (ENSBBBG00000000972)	ENSBBBG00000000933	RSL24D1 (ENSBBBG00000000926)	UNC13C (ENSBBBG00000003687)	WDR72 (ENSBBBG00000007362)	ENSBBBG00000014976	ATOSA (ENSBBBG00000015015) #19	ENSBBBG00000015027 #20	MYO5A (ENSBBBG00000015441) #21	MYO5C (ENSBBBG00000003864) #22	GNB5 (ENSBBBG00000015550) #23	ENSBBBG00000015555 #24	MAPK6 (ENSBBBG00000015564) #25
Siberian musk deer	MODERN SPECIES	257	PYGO1 (ENSMMSG00000006373)	DNAAF4 (ENSMMSG00000006406)	PIERCE2 (ENSMMSG00000006447)	CCPG1 (ENSMMSG00000006480)	PIGB (ENSMMSG00000006576)	PIGBOS1 (ENSMMSG00000006610)	RAB27A (ENSMMSG00000006628)	RSL24D1 (ENSMMSG00000006658)	ENSMMSG00000006679	UNC13C (ENSMMSG00000006740)	WDR72 (ENSMMSG00000007136)	ONECUT1 (ENSMMSG00000007176)	ATOSA (ENSMMSG00000007199) #19	ENSMMSG00000007301 #20	MYO5A (ENSMMSG00000007391) #21	MYO5C (ENSMMSG00000007636) #22	GNB5 (ENSMMSG00000007700) #23	ENSMMSG00000007808 #24	MAPK6 (ENSMMSG00000007843) #25	LEO1 (ENSMMSG00000007876) #26	TMOD3 (ENSMMSG00000007942) #27	ENSMMSG00000007986 #28	LYSMD2 (ENSMMSG00000008168) #29	SCG3 (ENSMMSG00000008191) #30	DMXL2 (ENSMMSG00000008260) #34	ENSMMSG00000008364	GLDN (ENSMMSG00000008387) #33	CYP19A1 (ENSMMSG00000008477)	TNFAIP8L3 (ENSMMSG00000008559) #32	AP4E1 (ENSMMSG00000008584) #31	SPPL2A (ENSMMSG00000008629)
Yarkand deer	MODERN SPECIES	3	PRTG (ENSCHYG00000021091)	PYGO1 (ENSCHYG00000021276)	DNAAF4 (ENSCHYG00000021358)	PIERCE2 (ENSCHYG00000021599)	CCPG1 (ENSCHYG00000021635)	PIGB (ENSCHYG00000021828)	RAB27A (ENSCHYG00000021962)	RSL24D1 (ENSCHYG00000021995)	ENSCHYG00000022045	UNC13C (ENSCHYG00000022103)	WDR72 (ENSCHYG00000022789)	ONECUT1 (ENSCHYG00000022899)	ATOSA (ENSCHYG00000004775) #19	ENSCHYG00000004818 #20	MYO5A (ENSCHYG00000004853) #21	MYO5C (ENSCHYG00000004954) #22	GNB5 (ENSCHYG00000005170) #23	ENSCHYG00000005429 #24	MAPK6 (ENSCHYG00000005446) #25	LEO1 (ENSCHYG00000005500) #26	TMOD3 (ENSCHYG00000005609) #27	ENSCHYG00000005653	TMOD2 (ENSCHYG00000005690) #28	LYSMD2 (ENSCHYG00000005755) #29	SCG3 (ENSCHYG00000005796) #30	ENSCHYG00000005885	DMXL2 (ENSCHYG00000005927) #34	GLDN (ENSCHYG00000006071) #33	TNFAIP8L3 (ENSCHYG00000006220) #32	AP4E1 (ENSCHYG00000006273) #31	ENSCHYG00000006470
Camelidae	ANCESTRAL SPECIES	23	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Arabian camel	MODERN SPECIES	32	PYGO1 (ENSCDRG00005015513)	DNAAF4 (ENSCDRG00005015559)	PIERCE2 (ENSCDRG00005015626)	CCPG1 (ENSCDRG00005015670)	PIGB (ENSCDRG00005015836)	PIGBOS1 (ENSCDRG00005016000)	RAB27A (ENSCDRG00005016015)	RSL24D1 (ENSCDRG00005016070)	UNC13C (ENSCDRG00005016110)	WDR72 (ENSCDRG00005016225)	ONECUT1 (ENSCDRG00005016311)	ATOSA (ENSCDRG00005016350) #19	ENSCDRG00005016443 #20	ENSCDRG00005016549 #20	MYO5A (ENSCDRG00005016622) #21	MYO5C (ENSCDRG00005016931) #22	GNB5 (ENSCDRG00005017023) #23	ENSCDRG00005017165	MAPK6 (ENSCDRG00005017187) #25	LEO1 (ENSCDRG00005017239) #26	TMOD3 (ENSCDRG00005017327) #27	TMOD2 (ENSCDRG00005017395) #28	LYSMD2 (ENSCDRG00005017462) #29	SCG3 (ENSCDRG00005017511) #30	DMXL2 (ENSCDRG00005017610) #34	GLDN (ENSCDRG00005018113) #33	ENSCDRG00005018180	ENSCDRG00005018244	ENSCDRG00005018295	ENSCDRG00005018413	TNFAIP8L3 (ENSCDRG00005018434) #32
Alpaca	MODERN SPECIES	672																MYO5C (ENSVPAG00000007897) #22	GNB5 (ENSVPAG00000007896) #23	ENSVPAG00000007895
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157971 #22
Hedgehog	MODERN SPECIES	2666																MYO5C (ENSEEUG00000008004) #22
Common shrew	MODERN SPECIES	1985																MYO5C (ENSSARG00000008672) #22
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Primates	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Haplorrhini	ANCESTRAL SPECIES	17	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Catarrhini	ANCESTRAL SPECIES	20	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00910000147635	ENSGT00840000129915
Hominoidea	ANCESTRAL SPECIES	20	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00910000147635	ENSGT00840000129915	ENSGT00390000003488.a.a #32
Hominidae	ANCESTRAL SPECIES	22	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	22	ENSGT00940000160047.t	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31
Homo/Pan group	ANCESTRAL SPECIES	21	ENSGT00940000160047.t	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31
Pan	ANCESTRAL SPECIES	20	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183099.u.b.a.a.a.b.a.f	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31
Bonobo	MODERN SPECIES	6	DNAAF4 (ENSPPAG00000013865)	PIERCE2 (ENSPPAG00000042984)	CCPG1 (ENSPPAG00000041408)	PIGB (ENSPPAG00000042876)	PIGBOS1 (ENSPPAG00000023425)	RAB27A (ENSPPAG00000030622)	ENSPPAG00000012061	ENSPPAG00000028747	WDR72 (ENSPPAG00000043364)	ENSPPAG00000004218	ONECUT1 (ENSPPAG00000036491)	ATOSA (ENSPPAG00000036434) #19	ARPP19 (ENSPPAG00000035761) #20	MYO5A (ENSPPAG00000028091) #21	ENSPPAG00000004057	MYO5C (ENSPPAG00000038522) #22	GNB5 (ENSPPAG00000039567) #23	BCL2L10 (ENSPPAG00000036717) #24	ENSPPAG00000034401	MAPK6 (ENSPPAG00000026917) #25	LEO1 (ENSPPAG00000040132) #26	ENSPPAG00000016895	TMOD3 (ENSPPAG00000029067) #27	TMOD2 (ENSPPAG00000030814) #28	ENSPPAG00000040680 #29	SCG3 (ENSPPAG00000030999) #30	DMXL2 (ENSPPAG00000039748) #34	GLDN (ENSPPAG00000028473) #33	CYP19A1 (ENSPPAG00000029532)	ENSPPAG00000035009 #32	AP4E1 (ENSPPAG00000040835) #31
Chimpanzee	MODERN SPECIES	6	DNAAF4 (ENSPTRG00000007098)	PIERCE2 (ENSPTRG00000052094)	CCPG1 (ENSPTRG00000034458)	PIGB (ENSPTRG00000007096)	PIGBOS1 (ENSPTRG00000044984)	RAB27A (ENSPTRG00000007095)	RSL24D1 (ENSPTRG00000007094)	UNC13C (ENSPTRG00000007093)	WDR72 (ENSPTRG00000007092)	ENSPTRG00000048408	ONECUT1 (ENSPTRG00000007090)	ATOSA (ENSPTRG00000007089) #19	ARPP19 (ENSPTRG00000051653) #20	MYO5A (ENSPTRG00000023562) #21	ENSPTRG00000043417	MYO5C (ENSPTRG00000007085) #22	GNB5 (ENSPTRG00000007084) #23	BCL2L10 (ENSPTRG00000007083) #24	ENSPTRG00000043753	MAPK6 (ENSPTRG00000020224) #25	LEO1 (ENSPTRG00000007081) #26	ENSPTRG00000044798	TMOD3 (ENSPTRG00000007080) #27	TMOD2 (ENSPTRG00000044713) #28	LYSMD2 (ENSPTRG00000007078) #29	SCG3 (ENSPTRG00000007077) #30	DMXL2 (ENSPTRG00000007076) #34	GLDN (ENSPTRG00000007075) #33	CYP19A1 (ENSPTRG00000007074)	TNFAIP8L3 (ENSPTRG00000007073) #32	AP4E1 (ENSPTRG00000007072) #31
Human	MODERN SPECIES	6	PRTG (ENSG00000166450)	PYGO1 (ENSG00000171016)	DNAAF4 (ENSG00000256061)	PIERCE2 (ENSG00000261652)	CCPG1 (ENSG00000260916)	PIGB (ENSG00000069943)	PIGBOS1 (ENSG00000225973)	RAB27A (ENSG00000069974)	RSL24D1 (ENSG00000137876)	UNC13C (ENSG00000137766)	WDR72 (ENSG00000166415)	ONECUT1 (ENSG00000169856)	ATOSA (ENSG00000047346) #19	ARPP19 (ENSG00000128989) #20	MYO5A (ENSG00000197535) #21	MYO5C (ENSG00000128833) #22	GNB5 (ENSG00000069966) #23	BCL2L10 (ENSG00000137875) #24	ENSG00000289025	MAPK6 (ENSG00000069956) #25	LEO1 (ENSG00000166477) #26	TMOD3 (ENSG00000138594) #27	TMOD2 (ENSG00000128872) #28	LYSMD2 (ENSG00000140280) #29	SCG3 (ENSG00000104112) #30	DMXL2 (ENSG00000104093) #34	GLDN (ENSG00000186417) #33	CYP19A1 (ENSG00000137869)	TNFAIP8L3 (ENSG00000183578) #32	AP4E1 (ENSG00000081014) #31	SPPL2A (ENSG00000138600)
Gorilla	MODERN SPECIES	6	PIERCE2 (ENSGGOG00000040432)	PIGB (ENSGGOG00000009248)	CCPG1 (ENSGGOG00000002361)	RAB27A (ENSGGOG00000014519)	RSL24D1 (ENSGGOG00000005195)	ENSGGOG00000039371	UNC13C (ENSGGOG00000040705)	ENSGGOG00000043073	ONECUT1 (ENSGGOG00000004682)	ATOSA (ENSGGOG00000015199) #19	ARPP19 (ENSGGOG00000040423) #20	ENSGGOG00000037924	MYO5A (ENSGGOG00000006379) #21	ENSGGOG00000038207	ENSGGOG00000024275	MYO5C (ENSGGOG00000013502) #22	GNB5 (ENSGGOG00000001028) #23	BCL2L10 (ENSGGOG00000003522) #24	ENSGGOG00000038008	MAPK6 (ENSGGOG00000004003) #25	LEO1 (ENSGGOG00000008181) #26	ENSGGOG00000026003	TMOD3 (ENSGGOG00000036537) #27	TMOD2 (ENSGGOG00000015671) #28	ENSGGOG00000021952 #29	SCG3 (ENSGGOG00000002662) #30	DMXL2 (ENSGGOG00000014666) #34	GLDN (ENSGGOG00000003454) #33	CYP19A1 (ENSGGOG00000014029)	ENSGGOG00000022663 #32	AP4E1 (ENSGGOG00000011600) #31
Orangutan	MODERN SPECIES	6	ENSPPYG00000006501	PRTG (ENSPPYG00000006500)	PYGO1 (ENSPPYG00000006499)	DNAAF4 (ENSPPYG00000030700)	PIERCE2 (ENSPPYG00000036881)	PIGB (ENSPPYG00000006497)	CCPG1 (ENSPPYG00000006498)	RAB27A (ENSPPYG00000006496)	RSL24D1 (ENSPPYG00000006495)	UNC13C (ENSPPYG00000006494)	WDR72 (ENSPPYG00000006491)	ENSPPYG00000033552	ATOSA (ENSPPYG00000006488) #19	ENSPPYG00000033673 #20	MYO5A (ENSPPYG00000006486) #21	MYO5C (ENSPPYG00000006485) #22	GNB5 (ENSPPYG00000036406) #23	BCL2L10 (ENSPPYG00000006483) #24	MAPK6 (ENSPPYG00000006482) #25	LEO1 (ENSPPYG00000006481) #26	TMOD3 (ENSPPYG00000006480) #27	TMOD2 (ENSPPYG00000006479) #28	LYSMD2 (ENSPPYG00000006478) #29	SCG3 (ENSPPYG00000006477) #30	DMXL2 (ENSPPYG00000029802) #34	GLDN (ENSPPYG00000006476) #33	CYP19A1 (ENSPPYG00000006475)	ENSPPYG00000006474 #32	AP4E1 (ENSPPYG00000006473) #31	SPPL2A (ENSPPYG00000006472)	TRPM7 (ENSPPYG00000006471)
Gibbon	MODERN SPECIES	21	DNAAF4 (ENSNLEG00000006617)	ENSNLEG00000036099	PIERCE2 (ENSNLEG00000029216)	CCPG1 (ENSNLEG00000006611)	PIGB (ENSNLEG00000006602)	RAB27A (ENSNLEG00000006592)	RSL24D1 (ENSNLEG00000006578)	ENSNLEG00000031609	ENSNLEG00000035689	WDR72 (ENSNLEG00000006564)	ONECUT1 (ENSNLEG00000006563)	ATOSA (ENSNLEG00000006552) #19	ARPP19 (ENSNLEG00000006551) #20	MYO5A (ENSNLEG00000006513) #21	ENSNLEG00000028385	MYO5C (ENSNLEG00000006495) #22	GNB5 (ENSNLEG00000031053) #23	ENSNLEG00000006483	ENSNLEG00000032854	MAPK6 (ENSNLEG00000006476) #25	LEO1 (ENSNLEG00000006468) #26	TMOD3 (ENSNLEG00000006457) #27	ENSNLEG00000031488	ENSNLEG00000028273	TMOD2 (ENSNLEG00000006450) #28	LYSMD2 (ENSNLEG00000028409) #29	SCG3 (ENSNLEG00000006436) #30	DMXL2 (ENSNLEG00000006382) #34	GLDN (ENSNLEG00000006380) #33	CYP19A1 (ENSNLEG00000006364)	ENSNLEG00000027408
Cercopithecidae	ANCESTRAL SPECIES	21	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000000360.q.b	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00910000147635
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000000360.q.b	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a.b #34	ENSGT00940000158020 #33	ENSGT00910000147635
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000000360.q.b	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00910000148697	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b.bb.a	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a.b #34	ENSGT00940000158020 #33	ENSGT00910000147635
Cercopithecinae_b	ANCESTRAL SPECIES	31	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000000360.q.b	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00910000148697	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b.bb.a	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a.b #34
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES	151																ENSPANG00000049349 #22
Olive baboon	MODERN SPECIES	17	ENSPANG00000017296	ENSPANG00000032347	ENSPANG00000017291	ENSPANG00000017290	ENSPANG00000051200	ENSPANG00000051138	ENSPANG00000017289	ENSPANG00000017320	ENSPANG00000046076	ENSPANG00000051215	ENSPANG00000017410	ENSPANG00000017409 #19	ENSPANG00000051061	ENSPANG00000029928 #20	ENSPANG00000017406 #21	ENSPANG00000017451 #22	ENSPANG00000045860 #23	ENSPANG00000044179	ENSPANG00000017483 #30	ENSPANG00000017484 #29	ENSPANG00000017481 #27	ENSPANG00000017453 #26	ENSPANG00000017454 #25	ENSPANG00000033742	ENSPANG00000017449 #24	ENSPANG00000017547	SPPL2A (ENSPANG00000017548)	ENSPANG00000046860	ENSPANG00000017686	ENSPANG00000017687	GABPB1 (ENSPANG00000017688)
Cercopithecinae_d	ANCESTRAL SPECIES	37	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000000360.q.b	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00910000148697	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b.bb.a	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.b.c.a.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a.b #34
Drill	MODERN SPECIES	142	DNAAF4 (ENSMLEG00000029485)	PIERCE2 (ENSMLEG00000040368)	CCPG1 (ENSMLEG00000008809)	PIGB (ENSMLEG00000037773)	RAB27A (ENSMLEG00000039719)	RSL24D1 (ENSMLEG00000036597)	UNC13C (ENSMLEG00000032979)	WDR72 (ENSMLEG00000028035)	ONECUT1 (ENSMLEG00000034916)	ATOSA (ENSMLEG00000038153) #19	ARPP19 (ENSMLEG00000037217) #20	ENSMLEG00000044252	ENSMLEG00000038090	MYO5A (ENSMLEG00000036957) #21	ENSMLEG00000027306	MYO5C (ENSMLEG00000033637) #22	ENSMLEG00000044452	GNB5 (ENSMLEG00000035504) #23	MAPK6 (ENSMLEG00000029288) #25	LEO1 (ENSMLEG00000043547) #26	ENSMLEG00000039364	TMOD3 (ENSMLEG00000029863) #27	TMOD2 (ENSMLEG00000036986) #28	LYSMD2 (ENSMLEG00000027601) #29	SCG3 (ENSMLEG00000036493) #30	DMXL2 (ENSMLEG00000025276) #34
Sooty mangabey	MODERN SPECIES	336	PIERCE2 (ENSCATG00000034873)	CCPG1 (ENSCATG00000045148)	PIGB (ENSCATG00000019266)	RAB27A (ENSCATG00000025844)	RSL24D1 (ENSCATG00000035416)	UNC13C (ENSCATG00000022600)	WDR72 (ENSCATG00000043068)	ONECUT1 (ENSCATG00000033351)	ATOSA (ENSCATG00000042209) #19	ARPP19 (ENSCATG00000042333) #20	MYO5A (ENSCATG00000029795) #21	ENSCATG00000041889	ENSCATG00000033147	ENSCATG00000021968	ENSCATG00000022412	MYO5C (ENSCATG00000030548) #22	GNB5 (ENSCATG00000020988) #23	ENSCATG00000039348	BCL2L10 (ENSCATG00000036646) #24	ENSCATG00000041201	MAPK6 (ENSCATG00000008200) #25	LEO1 (ENSCATG00000014510) #26	TMOD3 (ENSCATG00000028489) #27	TMOD2 (ENSCATG00000038691) #28	LYSMD2 (ENSCATG00000040384) #29	SCG3 (ENSCATG00000044650) #30	DMXL2 (ENSCATG00000029558) #34
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.b	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.a #20	ENSGT00390000000360.q.b	ENSGT00940000155347.a.b #21	ENSGT00910000147188	ENSGT00910000148697	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b.bb.a	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.b.c.a.b	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a.b #34	ENSGT00940000158020 #33	ENSGT00910000147635	ENSGT00840000129915
Pig-tailed macaque	MODERN SPECIES	77	CCPG1 (ENSMNEG00000030126)	PIGB (ENSMNEG00000015586)	RAB27A (ENSMNEG00000008433)	RSL24D1 (ENSMNEG00000033431)	UNC13C (ENSMNEG00000038451)	WDR72 (ENSMNEG00000039944)	ONECUT1 (ENSMNEG00000004202)	ATOSA (ENSMNEG00000038367) #19	ARPP19 (ENSMNEG00000029966) #20	ENSMNEG00000040098	ENSMNEG00000042300	ENSMNEG00000038644	MYO5A (ENSMNEG00000026852) #21	ENSMNEG00000027175	ENSMNEG00000023213	MYO5C (ENSMNEG00000010155) #22	GNB5 (ENSMNEG00000040782) #23	ENSMNEG00000034702	BCL2L10 (ENSMNEG00000025255) #24	ENSMNEG00000031166	MAPK6 (ENSMNEG00000036532) #25	LEO1 (ENSMNEG00000038033) #26	TMOD3 (ENSMNEG00000028320) #27	TMOD2 (ENSMNEG00000043126) #28	LYSMD2 (ENSMNEG00000042179) #29	SCG3 (ENSMNEG00000041747) #30	DMXL2 (ENSMNEG00000041811) #34	GLDN (ENSMNEG00000042338) #33	CYP19A1 (ENSMNEG00000037630)	ENSMNEG00000011449	TNFAIP8L3 (ENSMNEG00000005536) #32
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.a.b.a.b.a	ENSGT00940000155347.a.b #21	ENSGT01100000263539.b.b.b.b.a.a.b.b.a.b.a	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a.b #34	ENSGT00940000158020 #33	ENSGT00910000147635	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C.a.a #31	ENSGT00940000157722.c
Rhesus	MODERN SPECIES	17	DNAAF4 (ENSMMUG00000000863)	PIERCE2 (ENSMMUG00000029638)	PIGB (ENSMMUG00000010797)	CCPG1 (ENSMMUG00000010798)	RAB27A (ENSMMUG00000020694)	RSL24D1 (ENSMMUG00000020693)	ENSMMUG00000055979	UNC13C (ENSMMUG00000015038)	WDR72 (ENSMMUG00000001242)	ONECUT1 (ENSMMUG00000001425)	ATOSA (ENSMMUG00000001423) #19	ARPP19 (ENSMMUG00000061585) #20	ENSMMUG00000048644	MYO5A (ENSMMUG00000007509) #21	ENSMMUG00000061936	MYO5C (ENSMMUG00000007504) #22	GNB5 (ENSMMUG00000017374) #23	BCL2L10 (ENSMMUG00000017372) #24	MAPK6 (ENSMMUG00000029652) #25	LEO1 (ENSMMUG00000002346) #26	TMOD3 (ENSMMUG00000002345) #27	TMOD2 (ENSMMUG00000017432) #28	LYSMD2 (ENSMMUG00000017437) #29	SCG3 (ENSMMUG00000017435) #30	DMXL2 (ENSMMUG00000000754) #34	GLDN (ENSMMUG00000005976) #33	CYP19A1 (ENSMMUG00000002553)	TNFAIP8L3 (ENSMMUG00000001388) #32	AP4E1 (ENSMMUG00000015159) #31	ENSMMUG00000052556	TRPM7 (ENSMMUG00000008575)
Crab-eating macaque	MODERN SPECIES	17	ENSMFAG00000040831	ENSMFAG00000060666	ENSMFAG00000062680	UNC13C (ENSMFAG00000003096)	WDR72 (ENSMFAG00000046332)	ENSMFAG00000063514	ONECUT1 (ENSMFAG00000005880)	ATOSA (ENSMFAG00000042817) #19	ARPP19 (ENSMFAG00000049942) #20	ENSMFAG00000035450	ENSMFAG00000057631	ENSMFAG00000061742	MYO5A (ENSMFAG00000044339) #21	ENSMFAG00000064486	ENSMFAG00000050194	MYO5C (ENSMFAG00000033683) #22	ENSMFAG00000054874	GNB5 (ENSMFAG00000003513) #23	ENSMFAG00000040530	ENSMFAG00000065089	MAPK6 (ENSMFAG00000037559) #25	LEO1 (ENSMFAG00000032135) #26	TMOD3 (ENSMFAG00000045173) #27	LYSMD2 (ENSMFAG00000001285) #29	SCG3 (ENSMFAG00000031824) #30	DMXL2 (ENSMFAG00000035773) #34	GLDN (ENSMFAG00000041483) #33	ENSMFAG00000064052	CYP19A1 (ENSMFAG00000038412)	TNFAIP8L3 (ENSMFAG00000046411) #32	ENSMFAG00000053030
Vervet Monkey	MODERN SPECIES	18	PYGO1 (ENSCSAG00000011684)	DNAAF4 (ENSCSAG00000011680)	PIERCE2 (ENSCSAG00000011676)	CCPG1 (ENSCSAG00000011670)	PIGB (ENSCSAG00000011658)	RAB27A (ENSCSAG00000011625)	RSL24D1 (ENSCSAG00000011613)	UNC13C (ENSCSAG00000011584)	WDR72 (ENSCSAG00000011567)	ENSCSAG00000019744	ONECUT1 (ENSCSAG00000011546)	ATOSA (ENSCSAG00000011540) #19	ARPP19 (ENSCSAG00000011529) #20	MYO5A (ENSCSAG00000011520) #21	ENSCSAG00000011503	MYO5C (ENSCSAG00000011460) #22	GNB5 (ENSCSAG00000011383) #23	BCL2L10 (ENSCSAG00000011373) #24	MAPK6 (ENSCSAG00000011360) #25	LEO1 (ENSCSAG00000011342) #26	TMOD3 (ENSCSAG00000011333) #27	TMOD2 (ENSCSAG00000011323) #28	LYSMD2 (ENSCSAG00000011314) #29	SCG3 (ENSCSAG00000011309) #30	DMXL2 (ENSCSAG00000011292) #34	GLDN (ENSCSAG00000011271) #33	CYP19A1 (ENSCSAG00000011238)	TNFAIP8L3 (ENSCSAG00000011156) #32	AP4E1 (ENSCSAG00000011146) #31	SPPL2A (ENSCSAG00000011133)	TRPM7 (ENSCSAG00000011086)
Rhinopithecus	ANCESTRAL SPECIES	103								ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000000360.q.b	ENSGT00940000155347.a.b #21	ENSGT00910000148697	ENSGT00910000147188	ENSGT00940000157971 #22	ENSGT00390000005727.a.b.b	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00390000017491.s.b.c.a.b	ENSGT00390000017491.s.a.b.b	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00390000016493.b.a	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915
Golden snub-nosed monkey	MODERN SPECIES	967							ONECUT1 (ENSRROG00000033018)	ENSRROG00000045385	ATOSA (ENSRROG00000031888) #19	ARPP19 (ENSRROG00000043622) #20	ENSRROG00000018019	ENSRROG00000032116	MYO5A (ENSRROG00000041419) #21	ENSRROG00000040778	ENSRROG00000026589	MYO5C (ENSRROG00000044412) #22	GNB5 (ENSRROG00000039416) #23	ENSRROG00000045330	ENSRROG00000041670	ENSRROG00000045081	ENSRROG00000043470 #25	LEO1 (ENSRROG00000036360) #26	TMOD3 (ENSRROG00000043024) #27	TMOD2 (ENSRROG00000039670) #28	LYSMD2 (ENSRROG00000030616) #29	SCG3 (ENSRROG00000038199) #30	DMXL2 (ENSRROG00000032882) #34
Black snub-nosed monkey	MODERN SPECIES	814						ENSRBIG00000036183	ENSRBIG00000029606	ONECUT1 (ENSRBIG00000041165)	ATOSA (ENSRBIG00000013273) #19	ENSRBIG00000039917 #20	ENSRBIG00000035194	ENSRBIG00000028995	ENSRBIG00000030700	MYO5A (ENSRBIG00000026539) #21	ENSRBIG00000027579	MYO5C (ENSRBIG00000036923) #22	ENSRBIG00000044666	GNB5 (ENSRBIG00000041062) #23	BCL2L10 (ENSRBIG00000039361) #24	ENSRBIG00000021165	ENSRBIG00000041787 #25	LEO1 (ENSRBIG00000036945) #26	ENSRBIG00000043764	TMOD3 (ENSRBIG00000043218) #27	TMOD2 (ENSRBIG00000035530) #28	LYSMD2 (ENSRBIG00000033395) #29	SCG3 (ENSRBIG00000039621) #30	ENSRBIG00000030362	BUD31 (ENSRBIG00000044457)	PTCD1 (ENSRBIG00000043393)	CPSF4 (ENSRBIG00000033886)
Platyrrhini	ANCESTRAL SPECIES	27	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000006367.d.q	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Cebidae	ANCESTRAL SPECIES	29	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000006367.d.q	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Cebidae_a	ANCESTRAL SPECIES	52									ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00950000183014.f.a.g.b.b.a.a.a	ENSGT00390000006367.d.q	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351.k.a #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Capuchin	MODERN SPECIES	325							WDR72 (ENSCCAG00000026897)	ENSCCAG00000037326	ONECUT1 (ENSCCAG00000027805)	FAM214A (ENSCCAG00000032913) #19	ARPP19 (ENSCCAG00000022191) #20	MYO5A (ENSCCAG00000001972) #21	ENSCCAG00000025828	ENSCCAG00000034030	ENSCCAG00000032533	MYO5C (ENSCCAG00000032934) #22	GNB5 (ENSCCAG00000034924) #23	ENSCCAG00000031947	MAPK6 (ENSCCAG00000026546) #25	LEO1 (ENSCCAG00000025911) #26	TMOD3 (ENSCCAG00000036997) #27	ENSCCAG00000038068	TMOD2 (ENSCCAG00000022858) #28	LYSMD2 (ENSCCAG00000037360) #29	SCG3 (ENSCCAG00000018814) #30	DMXL2 (ENSCCAG00000031705) #34	GLDN (ENSCCAG00000027562) #33	CYP19A1 (ENSCCAG00000022272)
Bolivian squirrel monkey	MODERN SPECIES	190									WDR72 (ENSSBOG00000020082)	ONECUT1 (ENSSBOG00000033790)	ATOSA (ENSSBOG00000028184) #19	ARPP19 (ENSSBOG00000030365) #20	ENSSBOG00000026330	ENSSBOG00000029727	MYO5A (ENSSBOG00000033216) #21	MYO5C (ENSSBOG00000020491) #22	GNB5 (ENSSBOG00000031028) #23	ENSSBOG00000026375	MAPK6 (ENSSBOG00000023650) #25	LEO1 (ENSSBOG00000030660) #26	ENSSBOG00000025734	TMOD3 (ENSSBOG00000020246) #27	EVL (ENSSBOG00000021298)	DEGS2 (ENSSBOG00000000041)	ENSSBOG00000030828	SLC25A29 (ENSSBOG00000027271)	SLC25A47 (ENSSBOG00000026024)	WARS1 (ENSSBOG00000024797)	WDR25 (ENSSBOG00000022958)	BEGAIN (ENSSBOG00000028969)	DLK1 (ENSSBOG00000024967)
Marmoset	MODERN SPECIES	1	ENSCJAG00000036990	DNAAF4 (ENSCJAG00000046693)	CCPG1 (ENSCJAG00000002275)	PIGB (ENSCJAG00000002283)	PIGBOS1 (ENSCJAG00000040034)	RAB27A (ENSCJAG00000039845)	ENSCJAG00000048377	UNC13C (ENSCJAG00000000796)	WDR72 (ENSCJAG00000000823)	ENSCJAG00000071404	ONECUT1 (ENSCJAG00000046644)	ATOSA (ENSCJAG00000000854) #19	ARPP19 (ENSCJAG00000078368) #20	ENSCJAG00000000923	MYO5A (ENSCJAG00000000894) #21	MYO5C (ENSCJAG00000000926) #22	GNB5 (ENSCJAG00000000947) #23	ENSCJAG00000000960	MAPK6 (ENSCJAG00000000962) #25	LEO1 (ENSCJAG00000000966) #26	ENSCJAG00000083944	TMOD3 (ENSCJAG00000048246) #27	LYSMD2 (ENSCJAG00000059165) #29	SCG3 (ENSCJAG00000001016) #30	DMXL2 (ENSCJAG00000001038) #34	ENSCJAG00000078614	GLDN (ENSCJAG00000001160) #33	CYP19A1 (ENSCJAG00000001188)	ENSCJAG00000073380	TNFAIP8L3 (ENSCJAG00000065209) #32	AP4E1 (ENSCJAG00000001217) #31
Mas night monkey	MODERN SPECIES	664										ENSANAG00000022478	ONECUT1 (ENSANAG00000035373)	ATOSA (ENSANAG00000029707) #19	ARPP19 (ENSANAG00000027134) #20	ENSANAG00000031518	MYO5A (ENSANAG00000025383) #21	MYO5C (ENSANAG00000021733) #22	GNB5 (ENSANAG00000026002) #23	ENSANAG00000038274	MAPK6 (ENSANAG00000028054) #25	LEO1 (ENSANAG00000032692) #26	TMOD3 (ENSANAG00000026713) #27	TMOD2 (ENSANAG00000028736) #28	LYSMD2 (ENSANAG00000032260) #29	SCG3 (ENSANAG00000038079) #30	DMXL2 (ENSANAG00000038122) #34	GLDN (ENSANAG00000036122) #33	CYP19A1 (ENSANAG00000022843)	TNFAIP8L3 (ENSANAG00000032545) #32	AP4E1 (ENSANAG00000033916) #31	SPPL2A (ENSANAG00000020492)	TRPM7 (ENSANAG00000035495)
Tarsier	MODERN SPECIES	7012																MYO5C (ENSTSYG00000012129) #22	GNB5 (ENSTSYG00000012120) #23	BCL2L10 (ENSTSYG00000033019) #24	MAPK6 (ENSTSYG00000034620) #25	LEO1 (ENSTSYG00000006317) #26	TMOD3 (ENSTSYG00000003557) #27	TMOD2 (ENSTSYG00000010291) #28	LYSMD2 (ENSTSYG00000007362) #29	SCG3 (ENSTSYG00000007349) #30
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Lemuriformes	ANCESTRAL SPECIES	8	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00940000175727	ENSGT00950000182838.C #31	ENSGT00940000157722
Lemuriformes_a	ANCESTRAL SPECIES	1	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Coquerels sifaka	MODERN SPECIES	729	PRTG (ENSPCOG00000019280)	PYGO1 (ENSPCOG00000008297)	DNAAF4 (ENSPCOG00000021380)	PIERCE2 (ENSPCOG00000028237)	CCPG1 (ENSPCOG00000016294)	ENSPCOG00000024499	RAB27A (ENSPCOG00000015744)	ENSPCOG00000020651	ENSPCOG00000017279	WDR72 (ENSPCOG00000019239)	ONECUT1 (ENSPCOG00000020229)	ATOSA (ENSPCOG00000000910) #19	ARPP19 (ENSPCOG00000019472) #20	MYO5A (ENSPCOG00000021403) #21	ENSPCOG00000026901	MYO5C (ENSPCOG00000015242) #22	GNB5 (ENSPCOG00000019127) #23	BCL2L10 (ENSPCOG00000015416) #24	MAPK6 (ENSPCOG00000014366) #25	LEO1 (ENSPCOG00000020510) #26	TMOD3 (ENSPCOG00000027828) #27	TMOD2 (ENSPCOG00000017841) #28	LYSMD2 (ENSPCOG00000012351) #29	SCG3 (ENSPCOG00000016004) #30	DMXL2 (ENSPCOG00000019210) #34	GLDN (ENSPCOG00000023108) #33	CYP19A1 (ENSPCOG00000021555)	TNFAIP8L3 (ENSPCOG00000015280) #32
Greater bamboo lemur	MODERN SPECIES	281												ONECUT1 (ENSPSMG00000016416)	ATOSA (ENSPSMG00000016454) #19	ARPP19 (ENSPSMG00000016496) #20	MYO5A (ENSPSMG00000017017) #21	MYO5C (ENSPSMG00000017810) #22	GNB5 (ENSPSMG00000017869) #23	BCL2L10 (ENSPSMG00000017894) #24	MAPK6 (ENSPSMG00000017901) #25	LEO1 (ENSPSMG00000017949) #26	TMOD3 (ENSPSMG00000018010) #27	TMOD2 (ENSPSMG00000018041) #28	ENSPSMG00000018061 #29	SCG3 (ENSPSMG00000018102) #30	DMXL2 (ENSPSMG00000018217) #34	GLDN (ENSPSMG00000018240) #33	CYP19A1 (ENSPSMG00000018278)	TNFAIP8L3 (ENSPSMG00000018293) #32	AP4E1 (ENSPSMG00000018319) #31	SPPL2A (ENSPSMG00000018360)	TRPM7 (ENSPSMG00000018555)
Mouse lemur	MODERN SPECIES	22	WDR72 (ENSMICG00000003702)	UNC13C (ENSMICG00000047202)	ENSMICG00000046817	RSL24D1 (ENSMICG00000036329)	RAB27A (ENSMICG00000002622)	PIGB (ENSMICG00000002623)	CCPG1 (ENSMICG00000035464)	PIERCE2 (ENSMICG00000030451)	ENSMICG00000032770	PYGO1 (ENSMICG00000035806)	ENSMICG00000046687	ENSMICG00000017806	ATOSA (ENSMICG00000011870) #19	ENSMICG00000044868 #20	MYO5A (ENSMICG00000013517) #21	MYO5C (ENSMICG00000008381) #22	GNB5 (ENSMICG00000001204) #23	BCL2L10 (ENSMICG00000016608) #24	ENSMICG00000000517 #25	LEO1 (ENSMICG00000003454) #26	ENSMICG00000041955	TMOD3 (ENSMICG00000006216) #27	LYSMD2 (ENSMICG00000034220) #29	SCG3 (ENSMICG00000010286) #30	DMXL2 (ENSMICG00000010807) #34	GLDN (ENSMICG00000030199) #33	CYP19A1 (ENSMICG00000041874)	ENSMICG00000031384 #32	ENSMICG00000010752	ENSMICG00000047242 #31	SPPL2A (ENSMICG00000010743)
Bushbaby	MODERN SPECIES	126	RFX7 (ENSOGAG00000031795)	NEDD4 (ENSOGAG00000013838)	PRTG (ENSOGAG00000005449)	PYGO1 (ENSOGAG00000002974)	DNAAF4 (ENSOGAG00000032852)	CCPG1 (ENSOGAG00000010414)	PIGB (ENSOGAG00000010409)	RAB27A (ENSOGAG00000010405)	RSL24D1 (ENSOGAG00000010400)	UNC13C (ENSOGAG00000005900)	WDR72 (ENSOGAG00000009391)	ONECUT1 (ENSOGAG00000003851)	ATOSA (ENSOGAG00000013867) #19	ENSOGAG00000013865 #20	MYO5A (ENSOGAG00000003696) #21	MYO5C (ENSOGAG00000008695) #22	GNB5 (ENSOGAG00000008689) #23	ENSOGAG00000029517	BCL2L10 (ENSOGAG00000008687) #24	MAPK6 (ENSOGAG00000030786) #25	LEO1 (ENSOGAG00000002254) #26	TMOD3 (ENSOGAG00000002253) #27	TMOD2 (ENSOGAG00000013745) #28	LYSMD2 (ENSOGAG00000013741) #29	SCG3 (ENSOGAG00000013737) #30	ENSOGAG00000034281	DMXL2 (ENSOGAG00000013716) #34	GLDN (ENSOGAG00000013711) #33	CYP19A1 (ENSOGAG00000001848)	TNFAIP8L3 (ENSOGAG00000024393) #32	AP4E1 (ENSOGAG00000027801) #31
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Tree shrew	MODERN SPECIES	3346															MYO5A (ENSTBEG00000005144) #21	MYO5C (ENSTBEG00000001648) #22	GNB5 (ENSTBEG00000000883) #23
Glires	ANCESTRAL SPECIES	15	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Lagomorpha	ANCESTRAL SPECIES	7	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.a.a.c #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Rabbit	MODERN SPECIES	8	PIERCE2 (ENSOCUG00000039060)	CCPG1 (ENSOCUG00000007468)	PIGB (ENSOCUG00000007457)	PIGBOS1 (ENSOCUG00000034355)	RAB27A (ENSOCUG00000007452)	RSL24D1 (ENSOCUG00000007447)	ENSOCUG00000039000	ENSOCUG00000004057	UNC13C (ENSOCUG00000016041)	ENSOCUG00000031056	WDR72 (ENSOCUG00000006258)	ONECUT1 (ENSOCUG00000003312)	ATOSA (ENSOCUG00000007681) #19	ENSOCUG00000015489 #20	MYO5A (ENSOCUG00000007669) #21	MYO5C (ENSOCUG00000007649) #22	GNB5 (ENSOCUG00000011893) #23	BCL2L10 (ENSOCUG00000011889) #24	MAPK6 (ENSOCUG00000012189) #25	LEO1 (ENSOCUG00000012181) #26	ENSOCUG00000012987 #27	TMOD2 (ENSOCUG00000012981) #28	LYSMD2 (ENSOCUG00000025598) #29	SCG3 (ENSOCUG00000025494) #30	DMXL2 (ENSOCUG00000005948) #34	GLDN (ENSOCUG00000006860) #33	CYP19A1 (ENSOCUG00000012303)	TNFAIP8L3 (ENSOCUG00000012295) #32	AP4E1 (ENSOCUG00000007193) #31	ENSOCUG00000039657	SPPL2A (ENSOCUG00000003710)
Pika	MODERN SPECIES	969															MYO5A (ENSOPRG00000010288) #21	MYO5C (ENSOPRG00000010218) #22
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.b.bb	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Marmotini	ANCESTRAL SPECIES	9	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b.bb	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.b.bb	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Arctic ground squirrel	MODERN SPECIES	4									ENSUPAG00010006847	UNC13C (ENSUPAG00010006875)	WDR72 (ENSUPAG00010006964)	ONECUT1 (ENSUPAG00010007007)	ATOSA (ENSUPAG00010007022) #19	ARPP19 (ENSUPAG00010007068) #20	MYO5A (ENSUPAG00010007094) #21	MYO5C (ENSUPAG00010007472) #22	GNB5 (ENSUPAG00010007508) #23	ENSUPAG00010007540	MAPK6 (ENSUPAG00010007550) #25	LEO1 (ENSUPAG00010007559) #26	ENSUPAG00010007578	ENSUPAG00010007580	TMOD3 (ENSUPAG00010007589) #27	TMOD2 (ENSUPAG00010007615) #28	LYSMD2 (ENSUPAG00010007635) #29	SCG3 (ENSUPAG00010007640) #30	DMXL2 (ENSUPAG00010007657) #34	GLDN (ENSUPAG00010007827) #33	CYP19A1 (ENSUPAG00010007854)	ENSUPAG00010007875	TNFAIP8L3 (ENSUPAG00010007881) #32
Squirrel	MODERN SPECIES	71	PRTG (ENSSTOG00000009243)	PYGO1 (ENSSTOG00000009236)	ENSSTOG00000028579	DNAAF4 (ENSSTOG00000021598)	PIERCE2 (ENSSTOG00000003853)	CCPG1 (ENSSTOG00000008480)	PIGB (ENSSTOG00000008450)	RAB27A (ENSSTOG00000025489)	RSL24D1 (ENSSTOG00000009408)	UNC13C (ENSSTOG00000026192)	WDR72 (ENSSTOG00000015381)	ONECUT1 (ENSSTOG00000028083)	ATOSA (ENSSTOG00000024505) #19	ENSSTOG00000003677 #20	MYO5A (ENSSTOG00000007106) #21	MYO5C (ENSSTOG00000014041) #22	GNB5 (ENSSTOG00000014031) #23	ENSSTOG00000019474	ENSSTOG00000032245 #25	ENSSTOG00000031277	ENSSTOG00000032278	LEO1 (ENSSTOG00000020671) #26	TMOD3 (ENSSTOG00000000249) #27	LYSMD2 (ENSSTOG00000015371) #29	SCG3 (ENSSTOG00000015355) #30	DMXL2 (ENSSTOG00000029061) #34	GLDN (ENSSTOG00000007455) #33	CYP19A1 (ENSSTOG00000006011)	TNFAIP8L3 (ENSSTOG00000005995) #32	AP4E1 (ENSSTOG00000005959) #31	SPPL2A (ENSSTOG00000005136)
Alpin marmot	MODERN SPECIES	7	NEDD4 (ENSMMMG00000015178)	ENSMMMG00000015209	PRTG (ENSMMMG00000015217)	PYGO1 (ENSMMMG00000015245)	DNAAF4 (ENSMMMG00000015251)	PIERCE2 (ENSMMMG00000015276)	CCPG1 (ENSMMMG00000015280)	RAB27A (ENSMMMG00000015328)	ENSMMMG00000015334	UNC13C (ENSMMMG00000015358)	ENSMMMG00000015421	ONECUT1 (ENSMMMG00000015445)	ATOSA (ENSMMMG00000015461) #19	ENSMMMG00000015496	MYO5A (ENSMMMG00000015509) #21	MYO5C (ENSMMMG00000015665) #22	GNB5 (ENSMMMG00000015706) #23	ENSMMMG00000015752	MAPK6 (ENSMMMG00000015769) #25	LEO1 (ENSMMMG00000015784) #26	TMOD3 (ENSMMMG00000015831) #27	TMOD2 (ENSMMMG00000015849) #28	ENSMMMG00000015923 #29	SCG3 (ENSMMMG00000015926) #30	DMXL2 (ENSMMMG00000015955) #34	GLDN (ENSMMMG00000016090) #33	CYP19A1 (ENSMMMG00000016103)	TNFAIP8L3 (ENSMMMG00000016114) #32	ENSMMMG00000016118	AP4E1 (ENSMMMG00000016124) #31	SPPL2A (ENSMMMG00000016150)
Eurasian red squirrel	MODERN SPECIES	11	PIERCE2 (ENSSVLG00005008825)	ENSSVLG00005008737	PIGB (ENSSVLG00005008710)	PIGBOS1 (ENSSVLG00005008699)	RAB27A (ENSSVLG00005008649)	ENSSVLG00005008601	UNC13C (ENSSVLG00005008250)	ENSSVLG00005008170	WDR72 (ENSSVLG00005007884)	ONECUT1 (ENSSVLG00005007833)	ATOSA (ENSSVLG00005007704) #19	ENSSVLG00005007651	ARPP19 (ENSSVLG00005007620) #20	MYO5A (ENSSVLG00005005115) #21	ENSSVLG00005004389	MYO5C (ENSSVLG00005004282) #22	GNB5 (ENSSVLG00005004191) #23	BCL2L10 (ENSSVLG00005004146) #24	ENSSVLG00005004133 #25	LEO1 (ENSSVLG00005004110) #26	TMOD3 (ENSSVLG00005004085) #27	TMOD2 (ENSSVLG00005004027) #28	LYSMD2 (ENSSVLG00005003983) #29	SCG3 (ENSSVLG00005003951) #30	ENSSVLG00005003911	DMXL2 (ENSSVLG00005003682) #34	ENSSVLG00005003544	GLDN (ENSSVLG00005003519) #33	CYP19A1 (ENSSVLG00005003478)	ENSSVLG00005003463	ENSSVLG00005003451
Hystricomorpha	ANCESTRAL SPECIES	15	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a.s	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Hystricomorpha_a	ANCESTRAL SPECIES	18	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.s	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441
Hystricomorpha_b	ANCESTRAL SPECIES	18	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a.s	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.cb #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441
Long-tailed chinchilla	MODERN SPECIES	116	PRTG (ENSCLAG00000009566)	PYGO1 (ENSCLAG00000010540)	ENSCLAG00000006970	ENSCLAG00000007327	PIERCE2 (ENSCLAG00000007999)	CCPG1 (ENSCLAG00000008443)	PIGB (ENSCLAG00000009183)	RAB27A (ENSCLAG00000006846)	RSL24D1 (ENSCLAG00000008785)	UNC13C (ENSCLAG00000013173)	WDR72 (ENSCLAG00000007300)	ONECUT1 (ENSCLAG00000009766)	ATOSA (ENSCLAG00000007724) #19	ARPP19 (ENSCLAG00000007027) #20	MYO5A (ENSCLAG00000008057) #21	MYO5C (ENSCLAG00000007222) #22	GNB5 (ENSCLAG00000007119) #23	MAPK6 (ENSCLAG00000011430) #25	LEO1 (ENSCLAG00000008430) #26	TMOD3 (ENSCLAG00000009824) #27	TMOD2 (ENSCLAG00000011977) #28	ENSCLAG00000006958 #29	SCG3 (ENSCLAG00000007223) #30	DMXL2 (ENSCLAG00000009860) #34	GLDN (ENSCLAG00000009280) #33	CYP19A1 (ENSCLAG00000012685)	TNFAIP8L3 (ENSCLAG00000012480) #32	ENSCLAG00000012342 #31	SPPL2A (ENSCLAG00000012765)	TRPM7 (ENSCLAG00000011050)	USP50 (ENSCLAG00000015654)
Degu	MODERN SPECIES	146	PYGO1 (ENSODEG00000005615)	DNAAF4 (ENSODEG00000007101)	PIERCE2 (ENSODEG00000007192)	CCPG1 (ENSODEG00000007737)	PIGB (ENSODEG00000006748)	RAB27A (ENSODEG00000006284)	RSL24D1 (ENSODEG00000005430)	ENSODEG00000006126	ENSODEG00000019275	ENSODEG00000006149	ONECUT1 (ENSODEG00000007415)	ATOSA (ENSODEG00000007975) #19	ENSODEG00000005366 #20	ENSODEG00000019439	MYO5A (ENSODEG00000008230) #21	MYO5C (ENSODEG00000005941) #22	GNB5 (ENSODEG00000006055) #23	ENSODEG00000007404 #25	LEO1 (ENSODEG00000008095) #26	TMOD3 (ENSODEG00000006720) #27	TMOD2 (ENSODEG00000008645) #28	LYSMD2 (ENSODEG00000007006) #29	SCG3 (ENSODEG00000008588) #30	DMXL2 (ENSODEG00000007956) #34	ENSODEG00000019746	GLDN (ENSODEG00000010063) #33	CYP19A1 (ENSODEG00000007934)	TNFAIP8L3 (ENSODEG00000006955) #32	ENSODEG00000007172 #31	SPPL2A (ENSODEG00000007784)	TRPM7 (ENSODEG00000008007)
Guinea pig	MODERN SPECIES	23	PRTG (ENSCPOG00000001715)	PYGO1 (ENSCPOG00000031441)	DNAAF4 (ENSCPOG00000023129)	PIERCE2 (ENSCPOG00000034404)	CCPG1 (ENSCPOG00000011667)	PIGB (ENSCPOG00000011660)	RAB27A (ENSCPOG00000030394)	RSL24D1 (ENSCPOG00000009371)	ENSCPOG00000026063	UNC13C (ENSCPOG00000007805)	WDR72 (ENSCPOG00000011137)	ONECUT1 (ENSCPOG00000026341)	ATOSA (ENSCPOG00000014708) #19	ARPP19 (ENSCPOG00000011228) #20	MYO5A (ENSCPOG00000007886) #21	MYO5C (ENSCPOG00000007212) #22	GNB5 (ENSCPOG00000013528) #23	MAPK6 (ENSCPOG00000035029) #25	LEO1 (ENSCPOG00000009671) #26	TMOD3 (ENSCPOG00000002828) #27	TMOD2 (ENSCPOG00000012601) #28	LYSMD2 (ENSCPOG00000032986) #29	SCG3 (ENSCPOG00000014093) #30	DMXL2 (ENSCPOG00000009533) #34	GLDN (ENSCPOG00000034580) #33	CYP19A1 (ENSCPOG00000013810)	TNFAIP8L3 (ENSCPOG00000038999) #32	AP4E1 (ENSCPOG00000006153) #31	SPPL2A (ENSCPOG00000014127)	TRPM7 (ENSCPOG00000005405)	USP50 (ENSCPOG00000005401)
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000039905	CCPG1 (ENSHGLG00000012053)	PIGB (ENSHGLG00000011247)	ENSHGLG00000044214	RAB27A (ENSHGLG00000013717)	RSL24D1 (ENSHGLG00000043923)	ENSHGLG00000039454	UNC13C (ENSHGLG00000006768)	WDR72 (ENSHGLG00000010353)	ENSHGLG00000001410	ENSHGLG00000015901	ONECUT1 (ENSHGLG00000046426)	FAM214A (ENSHGLG00000017408) #19	ARPP19 (ENSHGLG00000038794) #20	MYO5A (ENSHGLG00000013836) #21	MYO5C (ENSHGLG00000012305) #22	GNB5 (ENSHGLG00000012622) #23	ENSHGLG00000036414	MAPK6 (ENSHGLG00000018577) #25	LEO1 (ENSHGLG00000017678) #26	TMOD3 (ENSHGLG00000016880) #27	ENSHGLG00000034762	ENSHGLG00000040154	TMOD2 (ENSHGLG00000018596) #28	ENSHGLG00000014402 #29	SCG3 (ENSHGLG00000019449) #30	ENSHGLG00000042917	DMXL2 (ENSHGLG00000013835) #34	ENSHGLG00000048687	ENSHGLG00000032423	ENSHGLG00000048240
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32	ENSGT00950000182838.C #31	ENSGT00940000157722	ENSGT00940000157091
Myomorpha	ANCESTRAL SPECIES	25	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32
Muroidea	ANCESTRAL SPECIES	23	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00390000000096.b.a #34	ENSGT00940000158020 #33	ENSGT00840000129915	ENSGT00390000003488.a.a #32
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00940000162601	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065	ENSGT00390000015862
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00940000162601	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065	ENSGT00390000015862
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000158905	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351.n #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065	ENSGT00390000015862
Golden Hamster	MODERN SPECIES	658	Prtg (ENSMAUG00000021146)	Pygo1 (ENSMAUG00000007751)	Dnaaf4 (ENSMAUG00000012975)	Pierce2 (ENSMAUG00000021207)	Ccpg1 (ENSMAUG00000021179)	Pigb (ENSMAUG00000009724)	Rab27a (ENSMAUG00000013740)	Rsl24d1 (ENSMAUG00000011146)	ENSMAUG00000012949	Unc13c (ENSMAUG00000014928)	Wdr72 (ENSMAUG00000019773)	Onecut1 (ENSMAUG00000017863)	Atosa (ENSMAUG00000017090) #19	ENSMAUG00000013200 #20	Myo5a (ENSMAUG00000001195) #21	Myo5c (ENSMAUG00000019952) #22	Gnb5 (ENSMAUG00000008570) #23	ENSMAUG00000007608 #24	ENSMAUG00000002809 #25	Leo1 (ENSMAUG00000021013) #26	Tmod3 (ENSMAUG00000016527) #27	Tmod2 (ENSMAUG00000010992) #28	Lysmd2 (ENSMAUG00000006540) #29	Scg3 (ENSMAUG00000009353) #30	Bmp5 (ENSMAUG00000018758)	Hmgcll1 (ENSMAUG00000022050)	Gfral (ENSMAUG00000008364)	Hcrtr2 (ENSMAUG00000008463)	Fam83b (ENSMAUG00000021764)	Tinag (ENSMAUG00000018690)	Mlip (ENSMAUG00000011161)
Chinese hamster chok1gshd	MODERN SPECIES	284	Nedd4 (ENSCGRG00001024328)	Prtg (ENSCGRG00001019030)	Pygo1 (ENSCGRG00001005599)	Dnaaf4 (ENSCGRG00001024405)	Pierce2 (ENSCGRG00001022312)	Ccpg1 (ENSCGRG00001021450)	Pigb (ENSCGRG00001018673)	Rab27a (ENSCGRG00001015778)	ENSCGRG00001009123	Unc13c (ENSCGRG00001010273)	Wdr72 (ENSCGRG00001003397)	Onecut1 (ENSCGRG00001023722)	Atosa (ENSCGRG00001021946) #19	ENSCGRG00001016776 #20	Myo5a (ENSCGRG00001016350) #21	Myo5c (ENSCGRG00001004401) #22	Gnb5 (ENSCGRG00001012527) #23	ENSCGRG00001021399 #24	ENSCGRG00001019175 #25	Leo1 (ENSCGRG00001021688) #26	Tmod3 (ENSCGRG00001015113) #27	Tmod2 (ENSCGRG00001012835) #28	Lysmd2 (ENSCGRG00001007594) #29	Scg3 (ENSCGRG00001003651) #30	Bmp5 (ENSCGRG00001018423)	Hmgcll1 (ENSCGRG00001014320)	ENSCGRG00001012775	Gfral (ENSCGRG00001004854)	Hcrtr2 (ENSCGRG00001024668)	ENSCGRG00001024004	Fam83b (ENSCGRG00001020454)
Cricetidae_B	ANCESTRAL SPECIES	24	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00940000162601	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000154555.b.bb.a #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065	ENSGT00390000015862
Northern American deer mouse	MODERN SPECIES	20	Pygo1 (ENSPEMG00000005028)	Dnaaf4 (ENSPEMG00000014726)	Pierce2 (ENSPEMG00000023319)	Ccpg1 (ENSPEMG00000016732)	Pigb (ENSPEMG00000006147)	ENSPEMG00000029450	Rab27a (ENSPEMG00000020468)	ENSPEMG00000030185	Rsl24d1 (ENSPEMG00000000267)	Unc13c (ENSPEMG00000006393)	Wdr72 (ENSPEMG00000020427)	Onecut1 (ENSPEMG00000000989)	Atosa (ENSPEMG00000016799) #19	Arpp19 (ENSPEMG00000028092) #20	Myo5a (ENSPEMG00000012848) #21	Myo5c (ENSPEMG00000010318) #22	Gnb5 (ENSPEMG00000004103) #23	ENSPEMG00000026312 #24	Leo1 (ENSPEMG00000003747) #26	Tmod3 (ENSPEMG00000015498) #27	Tmod2 (ENSPEMG00000030712) #28	Lysmd2 (ENSPEMG00000028409) #29	Scg3 (ENSPEMG00000012610) #30	Bmp5 (ENSPEMG00000002005)	Hmgcll1 (ENSPEMG00000012034)	Gfral (ENSPEMG00000007225)	Hcrtr2 (ENSPEMG00000018057)	Fam83b (ENSPEMG00000024281)	Tinag (ENSPEMG00000023733)	Mlip (ENSPEMG00000000629)	Lrrc1 (ENSPEMG00000015983)
Prairie vole	MODERN SPECIES	13	Pierce2 (ENSMOCG00000012469)	Ccpg1 (ENSMOCG00000003089)	Pigb (ENSMOCG00000002149)	Rab27a (ENSMOCG00000021412)	ENSMOCG00000006005	ENSMOCG00000003818	Unc13c (ENSMOCG00000019135)	ENSMOCG00000021666	Wdr72 (ENSMOCG00000011643)	Onecut1 (ENSMOCG00000002613)	Atosa (ENSMOCG00000004794) #19	ENSMOCG00000006583 #20	ENSMOCG00000007481	ENSMOCG00000000490	Myo5a (ENSMOCG00000019814) #21	Myo5c (ENSMOCG00000022585) #22	Gnb5 (ENSMOCG00000002654) #23	ENSMOCG00000017284 #24	Mapk6 (ENSMOCG00000003825) #25	Leo1 (ENSMOCG00000012894) #26	Tmod3 (ENSMOCG00000005868) #27	Tmod2 (ENSMOCG00000020810) #28	Lysmd2 (ENSMOCG00000019308) #29	Scg3 (ENSMOCG00000018367) #30	Bmp5 (ENSMOCG00000017571)	Hmgcll1 (ENSMOCG00000022504)	Gfral (ENSMOCG00000006944)	Hcrtr2 (ENSMOCG00000014320)	Fam83b (ENSMOCG00000022341)	Tinag (ENSMOCG00000004718)	Mlip (ENSMOCG00000014883)
Murinae	ANCESTRAL SPECIES	3	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00940000162601	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065
Mus	ANCESTRAL SPECIES	4	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00940000162601	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00900000143709	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065
Mus_A	ANCESTRAL SPECIES	4	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00940000162601.c	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00900000143709	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065
Mus_B	ANCESTRAL SPECIES	3	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00940000162601.c	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00900000143709	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065
Mouse	MODERN SPECIES	18	Dnaaf4 (ENSMUSG00000092192)	Pierce2 (ENSMUSG00000086158)	Ccpg1 (ENSMUSG00000034563)	Pigb (ENSMUSG00000079469)	Pigbos1 (ENSMUSG00000098332)	Rab27a (ENSMUSG00000032202)	Khdc3 (ENSMUSG00000092622)	Gm20509 (ENSMUSG00000092310)	Rsl24d1 (ENSMUSG00000032215)	Unc13c (ENSMUSG00000062151)	Wdr72 (ENSMUSG00000044976)	Onecut1 (ENSMUSG00000043013)	Atosa (ENSMUSG00000034858) #19	Arpp19 (ENSMUSG00000007656) #20	Myo5a (ENSMUSG00000034593) #21	Myo5c (ENSMUSG00000033590) #22	Gnb5 (ENSMUSG00000032192) #23	Bcl2l10 (ENSMUSG00000032191)	Mapk6 (ENSMUSG00000042688) #25	Leo1 (ENSMUSG00000042487) #26	Tmod3 (ENSMUSG00000058587) #27	Tmod2 (ENSMUSG00000032186) #28	Lysmd2 (ENSMUSG00000032184) #29	Scg3 (ENSMUSG00000032181) #30	Bmp5 (ENSMUSG00000032179)	Hmgcll1 (ENSMUSG00000007908)	Gfral (ENSMUSG00000059383)	Hcrtr2 (ENSMUSG00000032360)	Fam83b (ENSMUSG00000032358)	Tinag (ENSMUSG00000032357)	Mlip (ENSMUSG00000032355)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000155943.a	ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00940000156218	ENSGT00940000162601.c	ENSGT00950000183105.B.a.a	ENSGT00940000155174	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555.b.bb.b #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT00940000164610	ENSGT00940000154351 #25	ENSGT00900000143709	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889	ENSGT00940000161065
spretus	MODERN SPECIES	18	MGP_SPRETEiJ_G0033561	MGP_SPRETEiJ_G0033562	Pierce2 (MGP_SPRETEiJ_G0033563)	Ccpg1 (MGP_SPRETEiJ_G0033564)	Pigb (MGP_SPRETEiJ_G0033565)	Rab27a (MGP_SPRETEiJ_G0033566)	Khdc3 (MGP_SPRETEiJ_G0033567)	MGP_SPRETEiJ_G0033568	Rsl24d1 (MGP_SPRETEiJ_G0033569)	Unc13c (MGP_SPRETEiJ_G0033570)	Wdr72 (MGP_SPRETEiJ_G0033571)	Onecut1 (MGP_SPRETEiJ_G0033572)	Atosa (MGP_SPRETEiJ_G0033573) #19	MGP_SPRETEiJ_G0033574 #20	Myo5a (MGP_SPRETEiJ_G0033575) #21	Myo5c (MGP_SPRETEiJ_G0033576) #22	Gnb5 (MGP_SPRETEiJ_G0033577) #23	Bcl2l10 (MGP_SPRETEiJ_G0033578)	Mapk6 (MGP_SPRETEiJ_G0033579) #25	MGP_SPRETEiJ_G0033580	Leo1 (MGP_SPRETEiJ_G0033581) #26	Tmod3 (MGP_SPRETEiJ_G0033582) #27	Tmod2 (MGP_SPRETEiJ_G0033583) #28	Lysmd2 (MGP_SPRETEiJ_G0033584) #29	Scg3 (MGP_SPRETEiJ_G0033585) #30	Bmp5 (MGP_SPRETEiJ_G0033586)	Hmgcll1 (MGP_SPRETEiJ_G0033587)	Gfral (MGP_SPRETEiJ_G0033588)	Hcrtr2 (MGP_SPRETEiJ_G0033589)	Fam83b (MGP_SPRETEiJ_G0033590)	Tinag (MGP_SPRETEiJ_G0033591)
Ryukyu mouse	MODERN SPECIES	18	MGP_CAROLIEiJ_G0032423	MGP_CAROLIEiJ_G0032424	Pierce2 (MGP_CAROLIEiJ_G0032425)	Ccpg1 (MGP_CAROLIEiJ_G0032426)	Pigb (MGP_CAROLIEiJ_G0032427)	Rab27a (MGP_CAROLIEiJ_G0032428)	MGP_CAROLIEiJ_G0032429	MGP_CAROLIEiJ_G0032430	Rsl24d1 (MGP_CAROLIEiJ_G0032431)	Unc13c (MGP_CAROLIEiJ_G0032432)	Wdr72 (MGP_CAROLIEiJ_G0032433)	Onecut1 (MGP_CAROLIEiJ_G0032434)	Atosa (MGP_CAROLIEiJ_G0032435) #19	MGP_CAROLIEiJ_G0032436 #20	Myo5a (MGP_CAROLIEiJ_G0032437) #21	Myo5c (MGP_CAROLIEiJ_G0032438) #22	Gnb5 (MGP_CAROLIEiJ_G0032439) #23	Bcl2l10 (MGP_CAROLIEiJ_G0032440)	Mapk6 (MGP_CAROLIEiJ_G0032441) #25	Leo1 (MGP_CAROLIEiJ_G0032442) #26	Tmod3 (MGP_CAROLIEiJ_G0032443) #27	Tmod2 (MGP_CAROLIEiJ_G0032444) #28	Lysmd2 (MGP_CAROLIEiJ_G0032445) #29	Scg3 (MGP_CAROLIEiJ_G0032446) #30	Bmp5 (MGP_CAROLIEiJ_G0032447)	Hmgcll1 (MGP_CAROLIEiJ_G0032448)	Gfral (MGP_CAROLIEiJ_G0032449)	Hcrtr2 (MGP_CAROLIEiJ_G0032450)	Fam83b (MGP_CAROLIEiJ_G0032451)	Tinag (MGP_CAROLIEiJ_G0032452)	Mlip (MGP_CAROLIEiJ_G0032453)
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0015287	MGP_PahariEiJ_G0015288	Pierce2 (MGP_PahariEiJ_G0015289)	Ccpg1 (MGP_PahariEiJ_G0015290)	Pigb (MGP_PahariEiJ_G0015291)	Rab27a (MGP_PahariEiJ_G0015292)	MGP_PahariEiJ_G0015293	MGP_PahariEiJ_G0015294	MGP_PahariEiJ_G0015295	Unc13c (MGP_PahariEiJ_G0015296)	Wdr72 (MGP_PahariEiJ_G0015297)	Onecut1 (MGP_PahariEiJ_G0015298)	Atosa (MGP_PahariEiJ_G0015299) #19	MGP_PahariEiJ_G0015300 #20	Myo5a (MGP_PahariEiJ_G0015301) #21	Myo5c (MGP_PahariEiJ_G0015302) #22	Gnb5 (MGP_PahariEiJ_G0015303) #23	Bcl2l10 (MGP_PahariEiJ_G0015304)	Mapk6 (MGP_PahariEiJ_G0015305) #25	MGP_PahariEiJ_G0015306	Leo1 (MGP_PahariEiJ_G0015307) #26	Tmod3 (MGP_PahariEiJ_G0015308) #27	Tmod2 (MGP_PahariEiJ_G0015309) #28	Lysmd2 (MGP_PahariEiJ_G0015310) #29	Scg3 (MGP_PahariEiJ_G0015311) #30	Bmp5 (MGP_PahariEiJ_G0015312)	Hmgcll1 (MGP_PahariEiJ_G0015313)	Gfral (MGP_PahariEiJ_G0015314)	Hcrtr2 (MGP_PahariEiJ_G0015315)	Fam83b (MGP_PahariEiJ_G0015316)	Tinag (MGP_PahariEiJ_G0015317)
Rat	MODERN SPECIES	18	Ccpg1 (ENSRNOG00000053428)	Pigb (ENSRNOG00000059622)	Pigbos1 (ENSRNOG00000067122)	Rab27a (ENSRNOG00000052499)	Khdc3 (ENSRNOG00000054460)	Rsl24d1 (ENSRNOG00000052787)	AC128582.1 (ENSRNOG00000051988)	ENSRNOG00000069906	Unc13c (ENSRNOG00000056612)	LOC100912027 (ENSRNOG00000070028)	Wdr72 (ENSRNOG00000054889)	Onecut1 (ENSRNOG00000008095)	Atosa (ENSRNOG00000058522) #19	Arpp19 (ENSRNOG00000063103) #20	Myo5a (ENSRNOG00000058866) #21	Myo5c (ENSRNOG00000008356) #22	Gnb5 (ENSRNOG00000047799) #23	Bcl2l10 (ENSRNOG00000009308) #24	Mapk6 (ENSRNOG00000009381) #25	Leo1 (ENSRNOG00000010116) #26	Tmod3 (ENSRNOG00000032436) #27	Tmod2 (ENSRNOG00000010447) #28	Lysmd2 (ENSRNOG00000010642) #29	Scg3 (ENSRNOG00000010784) #30	Bmp5 (ENSRNOG00000010917)	Hmgcll1 (ENSRNOG00000011193)	Gfral (ENSRNOG00000032063)	Hcrtr2 (ENSRNOG00000011251)	Fam83b (ENSRNOG00000069372)	Tinag (ENSRNOG00000058120)	Mlip (ENSRNOG00000005934)
Upper Galilee mountains blind mole rat	MODERN SPECIES	676									Unc13c (ENSNGAG00000013245)	Wdr72 (ENSNGAG00000024257)	Onecut1 (ENSNGAG00000024288)	Atosa (ENSNGAG00000001544) #19	ENSNGAG00000019055 #20	Myo5a (ENSNGAG00000009621) #21	ENSNGAG00000020100	Myo5c (ENSNGAG00000023828) #22	Gnb5 (ENSNGAG00000021801) #23	ENSNGAG00000021005 #24	Mapk6 (ENSNGAG00000021990) #25	Leo1 (ENSNGAG00000021289) #26	Tmod3 (ENSNGAG00000019683) #27	Tmod2 (ENSNGAG00000011935) #28	Lysmd2 (ENSNGAG00000018156) #29	ENSNGAG00000024088	Scg3 (ENSNGAG00000021567) #30	Dmxl2 (ENSNGAG00000021936) #34	Gldn (ENSNGAG00000009445) #33	ENSNGAG00000022196	Cyp19a1 (ENSNGAG00000021699)	Tnfaip8l3 (ENSNGAG00000021486) #32	Uggt1 (ENSNGAG00000022181)
Lesser Egyptian jerboa	MODERN SPECIES	92	Nedd4 (ENSJJAG00000023014)	Prtg (ENSJJAG00000011718)	Pygo1 (ENSJJAG00000012455)	ENSJJAG00000018037	Pierce2 (ENSJJAG00000014904)	Ccpg1 (ENSJJAG00000009513)	Pigb (ENSJJAG00000011422)	Rab27a (ENSJJAG00000023800)	ENSJJAG00000010150	Unc13c (ENSJJAG00000022823)	ENSJJAG00000022225	Onecut1 (ENSJJAG00000021280)	Atosa (ENSJJAG00000011771) #19	ENSJJAG00000014481 #20	Myo5a (ENSJJAG00000012973) #21	Myo5c (ENSJJAG00000020302) #22	Gnb5 (ENSJJAG00000023631) #23	Leo1 (ENSJJAG00000017951) #26	Tmod3 (ENSJJAG00000013697) #27	Tmod2 (ENSJJAG00000010851) #28	ENSJJAG00000022776 #29	Scg3 (ENSJJAG00000014465) #30	Dmxl2 (ENSJJAG00000015070) #34	Gldn (ENSJJAG00000018080) #33	Cyp19a1 (ENSJJAG00000013545)
Kangaroo rat	MODERN SPECIES	330	Nedd4 (ENSDORG00000008857)	Prtg (ENSDORG00000012398)	Pygo1 (ENSDORG00000028210)	Dnaaf4 (ENSDORG00000012067)	Pierce2 (ENSDORG00000029919)	Ccpg1 (ENSDORG00000028418)	Pigb (ENSDORG00000004237)	Rab27a (ENSDORG00000029758)	Rsl24d1 (ENSDORG00000030252)	Unc13c (ENSDORG00000005687)	Wdr72 (ENSDORG00000003029)	Onecut1 (ENSDORG00000025825)	Atosa (ENSDORG00000011323) #19	ENSDORG00000024895 #20	ENSDORG00000003560 #21	Myo5c (ENSDORG00000003559) #22	Gnb5 (ENSDORG00000004080) #23	Mapk6 (ENSDORG00000012645) #25	Leo1 (ENSDORG00000006827) #26	Tmod3 (ENSDORG00000014961) #27	Tmod2 (ENSDORG00000015900) #28	Scg3 (ENSDORG00000015478) #30	Dmxl2 (ENSDORG00000002341) #34	Gldn (ENSDORG00000006427) #33	Cyp19a1 (ENSDORG00000009484)	Tnfaip8l3 (ENSDORG00000029156) #32	ENSDORG00000010151 #31	Sppl2a (ENSDORG00000008946)	Trpm7 (ENSDORG00000000789)	Usp50 (ENSDORG00000028003)	Usp8 (ENSDORG00000005653)
Platypus	MODERN SPECIES	19	DHX35 (ENSOANG00000015094)	FAM83D (ENSOANG00000044824)	PPP1R16B (ENSOANG00000049225)	ACTR5 (ENSOANG00000047752)	ENSOANG00000047255	ARHGAP40 (ENSOANG00000015092)	SLC32A1 (ENSOANG00000041271)	ENSOANG00000015088	PTPRT (ENSOANG00000015082)	MYBL2 (ENSOANG00000050677)	IFT52 (ENSOANG00000014960)	SGK2 (ENSOANG00000039782)	ATOSA (ENSOANG00000002613) #19	ARPP19 (ENSOANG00000040266) #20	MYO5A (ENSOANG00000004162) #21	MYO5C (ENSOANG00000004161) #22	GNB5 (ENSOANG00000047160) #23	ENSOANG00000041390	MAPK6 (ENSOANG00000004189) #25	LEO1 (ENSOANG00000003376) #26	TMOD3 (ENSOANG00000038195) #27	ENSOANG00000040856 #28	CBFA2T2 (ENSOANG00000002585)	SNTA1 (ENSOANG00000002101)	ONECUT1 (ENSOANG00000040861)	WDR72 (ENSOANG00000013014)	ENSOANG00000040269	ENSOANG00000043837	ENSOANG00000048818	ENSOANG00000012145	ENSOANG00000015609
Anura	ANCESTRAL SPECIES		ENSGT00530000063948.b	ENSGT00390000004930	ENSGT00940000154745.b	ENSGT00940000160497	ENSGT00950000183090.A	ENSGT00760000120436	ENSGT00940000156218	ENSGT00950000183105.B	ENSGT00940000155174	ENSGT00940000154929.B.j	ENSGT00940000160298	ENSGT00950000183103.c	ENSGT00940000157573 #19	ENSGT00940000154555 #20	ENSGT00940000155347.a.b #21	ENSGT00940000157971 #22	ENSGT01000000214413.a #23	ENSGT01090000260003.a.b.b.a.a.a.b.a #24	ENSGT00940000154351 #25	ENSGT00550000074952 #26	ENSGT00940000158280 #27	ENSGT00940000160631 #28	ENSGT00940000160054 #29	ENSGT00390000005488 #30	ENSGT00950000182838.C #31	ENSGT00390000003488.a.a #32	ENSGT00840000129915	ENSGT00940000158020 #33	ENSGT00390000000096.b.a #34	ENSGT00940000159303 #36	ENSGT01030000234532.A.b
Frog	MODERN SPECIES	3	dnaaf4 (ENSXETG00000007369)	PIERCE2 (ENSXETG00000036765)	ccpg1 (ENSXETG00000007370)	pigb (ENSXETG00000032008)	PIGBOS1 (ENSXETG00000045140)	rab27a (ENSXETG00000007375)	rsl24d1 (ENSXETG00000007376)	unc13c (ENSXETG00000006341)	ENSXETG00000046912	wdr72 (ENSXETG00000006344)	onecut1 (ENSXETG00000006349)	fam214a (ENSXETG00000006354) #19	arpp19 (ENSXETG00000046081) #20	myo5a (ENSXETG00000020736) #21	ENSXETG00000049256	myo5c (ENSXETG00000020739) #22	gnb5 (ENSXETG00000020741) #23	bcl2l10 (ENSXETG00000038162)	mapk6 (ENSXETG00000020744) #25	leo1 (ENSXETG00000020746) #26	tmod3 (ENSXETG00000020747) #27	tmod2 (ENSXETG00000020749) #28	btnl8 (ENSXETG00000020754) #29	scg3 (ENSXETG00000020755) #30	ap4e1 (ENSXETG00000020756) #31	tnfaip8l3 (ENSXETG00000036250) #32	cyp19a1 (ENSXETG00000020758)	gldn (ENSXETG00000020767) #33	dmxl2 (ENSXETG00000020770) #34	ENSXETG00000043223	sema6d (ENSXETG00000018391) #36
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000006410	PRTG (ENSLLEG00000006488)	NEDD4 (ENSLLEG00000006776)	ENSLLEG00000007299	ENSLLEG00000007341	ENSLLEG00000007564	ENSLLEG00000007574	RFX7 (ENSLLEG00000007598)	ENSLLEG00000007655	TEX9 (ENSLLEG00000007743)	MNS1 (ENSLLEG00000007808)	ENSLLEG00000007883	TCF12 (ENSLLEG00000008126)	ENSLLEG00000008841	MYO5A (ENSLLEG00000009028) #21	MYO5C (ENSLLEG00000011900) #22	GNB5 (ENSLLEG00000012270) #23	ENSLLEG00000012482 #24	MAPK6 (ENSLLEG00000012510) #25	ENSLLEG00000012559	ENSLLEG00000012618	LEO1 (ENSLLEG00000012664) #26	ENSLLEG00000012853 #27	ENSLLEG00000013274	ENSLLEG00000013296	ENSLLEG00000013364 #28	ENSLLEG00000013474	ENSLLEG00000013490	LYSMD2 (ENSLLEG00000013557) #29	SCG3 (ENSLLEG00000013682) #30	ENSLLEG00000013984
Coelacanth	MODERN SPECIES	2094													ATOSA (ENSLACG00000003068) #19	ARPP19 (ENSLACG00000004026) #20	MYO5A (ENSLACG00000005276) #21	MYO5C (ENSLACG00000007284) #22	bcl2l10 (ENSLACG00000009379) #24